CDG60_13850 794e1ccec069ecd80069fe80a16d882d 338 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 336 24.069 T 23-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13850 794e1ccec069ecd80069fe80a16d882d 338 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 23-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13850 794e1ccec069ecd80069fe80a16d882d 338 Pfam PF00146 NADH dehydrogenase 24 329 2.3E-119 T 23-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13850 794e1ccec069ecd80069fe80a16d882d 338 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 23-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_16665 1da5662271ffe1be2166f5d913ae7623 475 Pfam PF00589 Phage integrase family 225 441 3.8E-8 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_16665 1da5662271ffe1be2166f5d913ae7623 475 Gene3D G3DSA:1.10.150.130 58 164 8.8E-6 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_16665 1da5662271ffe1be2166f5d913ae7623 475 Gene3D G3DSA:1.10.443.10 217 453 1.0E-22 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_16665 1da5662271ffe1be2166f5d913ae7623 475 SUPERFAMILY SSF56349 196 443 1.62E-17 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 SUPERFAMILY SSF48300 4 58 7.06E-14 T 23-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 5.1E-16 T 23-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.725 T 23-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 Gene3D G3DSA:3.30.1390.10 52 122 6.2E-32 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 SUPERFAMILY SSF54736 51 122 3.49E-25 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 Gene3D G3DSA:1.20.5.710 2 51 5.2E-19 T 23-10-2018 CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.0E-45 T 23-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 1.7E-31 T 23-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02255 65236368435c2260c6fb21b325eac7bf 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 100 5.0E-13 T 23-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 44.291 T 23-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 2.7E-27 T 23-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SUPERFAMILY SSF55681 467 687 7.95E-47 T 23-10-2018 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Pfam PF03484 tRNA synthetase B5 domain 406 471 8.4E-18 T 23-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Gene3D G3DSA:3.30.56.10 7 179 1.2E-72 T 23-10-2018 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Gene3D G3DSA:2.40.50.140 39 154 1.2E-72 T 23-10-2018 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SUPERFAMILY SSF54991 694 791 3.92E-29 T 23-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Gene3D G3DSA:3.30.56.10 400 474 1.2E-22 T 23-10-2018 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Gene3D G3DSA:3.50.40.10 198 393 9.1E-74 T 23-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SMART SM00874 402 471 7.3E-25 T 23-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SUPERFAMILY SSF46955 404 475 2.47E-17 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SUPERFAMILY SSF50249 39 195 2.69E-52 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Pfam PF03483 B3/4 domain 211 384 8.0E-66 T 23-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Pfam PF01588 Putative tRNA binding domain 45 145 2.6E-28 T 23-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SMART SM00873 211 384 3.2E-88 T 23-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Gene3D G3DSA:3.30.70.380 699 792 1.8E-28 T 23-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SMART SM00896 698 791 3.4E-39 T 23-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 Gene3D G3DSA:3.30.930.10 486 688 6.7E-51 T 23-10-2018 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 4.4E-261 T 23-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDG60_14975 43e215defd5ef8ebefc97b5cab023878 793 SUPERFAMILY SSF56037 204 392 1.8E-68 T 23-10-2018 CDG60_02395 c386900e89080d5c7e5537900d155139 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 531 4.0E-49 T 23-10-2018 IPR001162 UvrC family homology region CDG60_02395 c386900e89080d5c7e5537900d155139 599 SUPERFAMILY SSF46600 193 246 1.83E-12 T 23-10-2018 IPR036876 UVR domain superfamily CDG60_02395 c386900e89080d5c7e5537900d155139 599 Pfam PF02151 UvrB/uvrC motif 210 240 2.0E-7 T 23-10-2018 IPR001943 UVR domain GO:0005515 CDG60_02395 c386900e89080d5c7e5537900d155139 599 Gene3D G3DSA:3.30.420.340 377 541 1.8E-52 T 23-10-2018 IPR038476 UvrC homology region 2 superfamily CDG60_02395 c386900e89080d5c7e5537900d155139 599 SUPERFAMILY SSF47781 510 598 4.13E-23 T 23-10-2018 IPR010994 RuvA domain 2-like CDG60_02395 c386900e89080d5c7e5537900d155139 599 Gene3D G3DSA:3.40.1440.10 5 104 3.0E-31 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDG60_02395 c386900e89080d5c7e5537900d155139 599 SMART SM00465 19 100 1.2E-23 T 23-10-2018 IPR000305 GIY-YIG endonuclease CDG60_02395 c386900e89080d5c7e5537900d155139 599 SUPERFAMILY SSF82771 19 102 1.05E-22 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDG60_02395 c386900e89080d5c7e5537900d155139 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 596 26.505 T 23-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CDG60_02395 c386900e89080d5c7e5537900d155139 599 Gene3D G3DSA:1.10.150.20 544 599 5.5E-18 T 23-10-2018 CDG60_02395 c386900e89080d5c7e5537900d155139 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 12 578 1.7E-176 T 23-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CDG60_02395 c386900e89080d5c7e5537900d155139 599 Pfam PF01541 GIY-YIG catalytic domain 21 95 2.2E-8 T 23-10-2018 IPR000305 GIY-YIG endonuclease CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 549 1049 5.1E-222 T 23-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 86 197 2.2E-44 T 23-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 Gene3D G3DSA:3.40.605.10 579 1048 4.7E-145 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 SUPERFAMILY SSF53720 581 1049 3.53E-125 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 PIRSF PIRSF000197 14 1248 0.0 T 23-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 Pfam PF01619 Proline dehydrogenase 207 508 1.3E-98 T 23-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 SUPERFAMILY SSF81935 27 199 5.49E-62 T 23-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 851 862 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 Gene3D G3DSA:3.20.20.220 31 121 3.4E-11 T 23-10-2018 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 Gene3D G3DSA:3.20.20.220 154 549 6.0E-149 T 23-10-2018 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 SUPERFAMILY SSF51730 200 557 2.24E-118 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 Gene3D G3DSA:3.40.309.10 826 1020 4.7E-145 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_08025 21dc6490c3ebafb2c44005d3bd969563 1248 Pfam PF00171 Aldehyde dehydrogenase family 601 1043 2.1E-116 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_13275 374a301f97c103574088d047244fed39 212 SUPERFAMILY SSF89360 14 110 5.1E-20 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG60_13275 374a301f97c103574088d047244fed39 212 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 198 7.0E-27 T 23-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CDG60_13275 374a301f97c103574088d047244fed39 212 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 211 40.01 T 23-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CDG60_13275 374a301f97c103574088d047244fed39 212 Pfam PF01106 NifU-like domain 127 198 1.3E-19 T 23-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CDG60_13275 374a301f97c103574088d047244fed39 212 SUPERFAMILY SSF117916 111 204 5.01E-21 T 23-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CDG60_13275 374a301f97c103574088d047244fed39 212 Gene3D G3DSA:2.60.300.12 16 113 1.3E-9 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG60_13275 374a301f97c103574088d047244fed39 212 Gene3D G3DSA:3.30.300.130 121 210 9.6E-20 T 23-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CDG60_13275 374a301f97c103574088d047244fed39 212 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 18 211 2.4E-85 T 23-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CDG60_13275 374a301f97c103574088d047244fed39 212 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 112 4.0E-7 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDG60_06485 ae8618265c7fb685c003d147f8fcc508 250 Gene3D G3DSA:3.40.50.620 1 249 1.5E-84 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_06485 ae8618265c7fb685c003d147f8fcc508 250 Pfam PF01012 Electron transfer flavoprotein domain 30 207 2.6E-45 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG60_06485 ae8618265c7fb685c003d147f8fcc508 250 SMART SM00893 23 212 2.5E-65 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG60_06485 ae8618265c7fb685c003d147f8fcc508 250 SUPERFAMILY SSF52402 1 243 2.02E-82 T 23-10-2018 CDG60_06485 ae8618265c7fb685c003d147f8fcc508 250 PIRSF PIRSF000090 1 250 5.2E-82 T 23-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDG60_06485 ae8618265c7fb685c003d147f8fcc508 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 156 176 - T 23-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDG60_01830 6751283744375075b2cc01132d517860 207 Gene3D G3DSA:3.40.50.450 15 206 8.1E-73 T 23-10-2018 CDG60_01830 6751283744375075b2cc01132d517860 207 SUPERFAMILY SSF102405 20 198 1.68E-61 T 23-10-2018 CDG60_01830 6751283744375075b2cc01132d517860 207 Pfam PF03641 Possible lysine decarboxylase 66 195 7.5E-44 T 23-10-2018 IPR031100 LOG family CDG60_01830 6751283744375075b2cc01132d517860 207 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 23 198 4.9E-59 T 23-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDG60_15630 4736a05de85c2324c1a8b8fb84351ff2 197 SUPERFAMILY SSF53335 11 171 4.45E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_15630 4736a05de85c2324c1a8b8fb84351ff2 197 Gene3D G3DSA:3.40.50.150 2 172 1.6E-26 T 23-10-2018 CDG60_15630 4736a05de85c2324c1a8b8fb84351ff2 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 1.3E-79 T 23-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CDG60_15630 4736a05de85c2324c1a8b8fb84351ff2 197 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 3.7E-76 T 23-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CDG60_04070 e59ce0cc4082c23229eb602d4343dab5 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 404 5.0E-180 T 23-10-2018 CDG60_04070 e59ce0cc4082c23229eb602d4343dab5 406 SUPERFAMILY SSF56266 14 403 7.85E-140 T 23-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG60_04070 e59ce0cc4082c23229eb602d4343dab5 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 153.637 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG60_04070 e59ce0cc4082c23229eb602d4343dab5 406 Pfam PF01960 ArgJ family 20 406 1.1E-143 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG60_04070 e59ce0cc4082c23229eb602d4343dab5 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 406 1.4E-125 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG60_04070 e59ce0cc4082c23229eb602d4343dab5 406 Gene3D G3DSA:3.10.20.340 277 406 3.7E-45 T 23-10-2018 CDG60_04070 e59ce0cc4082c23229eb602d4343dab5 406 Gene3D G3DSA:3.60.70.12 7 276 3.1E-89 T 23-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG60_10005 716226c9c3470b34c1a9bd5375d709c9 366 Pfam PF00561 alpha/beta hydrolase fold 78 172 5.5E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_10005 716226c9c3470b34c1a9bd5375d709c9 366 Gene3D G3DSA:3.40.50.1820 36 365 6.2E-27 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_10005 716226c9c3470b34c1a9bd5375d709c9 366 SUPERFAMILY SSF53474 46 361 2.34E-31 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11275 dd799bc181a02ead1da924bc49fa6b01 250 Gene3D G3DSA:1.20.910.10 1 250 2.0E-78 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_11275 dd799bc181a02ead1da924bc49fa6b01 250 SUPERFAMILY SSF48613 19 243 8.74E-46 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_11275 dd799bc181a02ead1da924bc49fa6b01 250 Pfam PF14518 Iron-containing redox enzyme 56 234 5.8E-21 T 23-10-2018 CDG60_07590 c77da78be4d89178ce8f756283fd9749 547 Gene3D G3DSA:3.50.50.60 43 290 2.7E-5 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_07590 c77da78be4d89178ce8f756283fd9749 547 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 524 6.6E-218 T 23-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CDG60_07590 c77da78be4d89178ce8f756283fd9749 547 SUPERFAMILY SSF51905 39 362 1.3E-22 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_07590 c77da78be4d89178ce8f756283fd9749 547 Gene3D G3DSA:3.30.9.10 145 209 2.7E-5 T 23-10-2018 CDG60_07590 c77da78be4d89178ce8f756283fd9749 547 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 524 48.525 T 23-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CDG60_07590 c77da78be4d89178ce8f756283fd9749 547 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 522 2.1E-190 T 23-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Gene3D G3DSA:2.40.110.10 161 281 8.6E-92 T 23-10-2018 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 2.1E-17 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Gene3D G3DSA:1.20.140.10 282 451 8.6E-92 T 23-10-2018 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 SUPERFAMILY SSF56645 38 279 3.01E-55 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 SUPERFAMILY SSF47203 288 474 2.58E-47 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 584 1.3E-22 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Gene3D G3DSA:1.10.540.10 44 160 8.6E-92 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 5.6E-16 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 1.2E-14 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_03900 85418d3df8ddd6fb5a4fb3e8f945f65b 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 3.6E-6 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDG60_15330 95b9bacb4b39945e4ff74cf6e731aa86 283 Gene3D G3DSA:1.10.150.650 102 175 7.5E-70 T 23-10-2018 CDG60_15330 95b9bacb4b39945e4ff74cf6e731aa86 283 Pfam PF02811 PHP domain 5 226 4.6E-12 T 23-10-2018 IPR004013 PHP domain GO:0003824 CDG60_15330 95b9bacb4b39945e4ff74cf6e731aa86 283 SMART SM00481 4 69 1.4E-13 T 23-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDG60_15330 95b9bacb4b39945e4ff74cf6e731aa86 283 Gene3D G3DSA:3.20.20.140 5 256 7.5E-70 T 23-10-2018 CDG60_15330 95b9bacb4b39945e4ff74cf6e731aa86 283 SUPERFAMILY SSF89550 5 265 2.75E-41 T 23-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDG60_02160 a6b29c6bf10832e47543faa5cc315f74 143 Pfam PF13279 Thioesterase-like superfamily 15 129 3.7E-20 T 23-10-2018 CDG60_02160 a6b29c6bf10832e47543faa5cc315f74 143 PIRSF PIRSF003230 3 138 4.2E-21 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDG60_02160 a6b29c6bf10832e47543faa5cc315f74 143 Gene3D G3DSA:3.10.129.10 1 138 3.4E-44 T 23-10-2018 CDG60_02160 a6b29c6bf10832e47543faa5cc315f74 143 SUPERFAMILY SSF54637 4 129 2.14E-36 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 Gene3D G3DSA:3.40.50.12780 48 513 7.7E-108 T 23-10-2018 CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 1.1E-24 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 Pfam PF00501 AMP-binding enzyme 81 520 1.2E-93 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 52.046 T 23-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 18 641 2.4E-304 T 23-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 SUPERFAMILY SSF56801 16 641 5.76E-185 T 23-10-2018 CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.0E-20 T 23-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CDG60_17245 6c952d3a4d5d7c2d018ca0901e69acc3 647 Gene3D G3DSA:3.30.300.30 516 647 5.2E-31 T 23-10-2018 CDG60_15855 01eacb8fda5d4c03125cacc4a004abf3 496 SUPERFAMILY SSF51905 1 388 6.26E-47 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15855 01eacb8fda5d4c03125cacc4a004abf3 496 Gene3D G3DSA:3.50.50.60 156 244 3.0E-11 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15855 01eacb8fda5d4c03125cacc4a004abf3 496 Gene3D G3DSA:3.50.50.60 1 155 8.9E-37 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15855 01eacb8fda5d4c03125cacc4a004abf3 496 Pfam PF00743 Flavin-binding monooxygenase-like 57 388 6.1E-11 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG60_15855 01eacb8fda5d4c03125cacc4a004abf3 496 Gene3D G3DSA:3.50.50.60 295 479 1.3E-11 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_17065 31bb84b090547763f02fe1357b036e7b 432 Pfam PF01593 Flavin containing amine oxidoreductase 10 266 4.8E-13 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CDG60_17065 31bb84b090547763f02fe1357b036e7b 432 Gene3D G3DSA:3.50.50.60 1 269 3.4E-19 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_17065 31bb84b090547763f02fe1357b036e7b 432 SUPERFAMILY SSF51905 3 409 1.19E-33 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 245 1.8E-17 T 23-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 23 601 41.614 T 23-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 SUPERFAMILY SSF56601 214 599 1.05E-89 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 Pfam PF00905 Penicillin binding protein transpeptidase domain 288 586 2.2E-74 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 SUPERFAMILY SSF56519 67 261 2.09E-39 T 23-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 Gene3D G3DSA:3.90.1310.10 57 146 3.2E-11 T 23-10-2018 CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 Gene3D G3DSA:3.90.1310.10 147 262 3.1E-31 T 23-10-2018 CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 Gene3D G3DSA:3.40.710.10 324 506 6.7E-122 T 23-10-2018 CDG60_16795 798a07cb89912d11bd02a31f33364a06 606 Gene3D G3DSA:3.30.450.330 263 590 6.7E-122 T 23-10-2018 CDG60_16410 4fea6fbaa6ae283c8d950c1216e1740e 327 Pfam PF00561 alpha/beta hydrolase fold 49 162 6.4E-13 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_16410 4fea6fbaa6ae283c8d950c1216e1740e 327 Gene3D G3DSA:3.40.50.1820 41 327 2.3E-73 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_16410 4fea6fbaa6ae283c8d950c1216e1740e 327 SUPERFAMILY SSF53474 44 299 1.03E-36 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_02535 6196693cba700dcfaedba12b215f6fde 174 Pfam PF17384 RimP C-terminal SH3 domain 107 172 2.1E-12 T 23-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CDG60_02535 6196693cba700dcfaedba12b215f6fde 174 SUPERFAMILY SSF75420 3 103 3.01E-18 T 23-10-2018 IPR035956 RimP, N-terminal domain superfamily CDG60_02535 6196693cba700dcfaedba12b215f6fde 174 Gene3D G3DSA:3.30.300.70 60 100 1.8E-8 T 23-10-2018 IPR035956 RimP, N-terminal domain superfamily CDG60_02535 6196693cba700dcfaedba12b215f6fde 174 Gene3D G3DSA:3.30.300.70 2 57 2.2E-6 T 23-10-2018 IPR035956 RimP, N-terminal domain superfamily CDG60_02535 6196693cba700dcfaedba12b215f6fde 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 174 20.99 T 23-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CDG60_02535 6196693cba700dcfaedba12b215f6fde 174 Pfam PF02576 RimP N-terminal domain 13 103 9.0E-19 T 23-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CDG60_02535 6196693cba700dcfaedba12b215f6fde 174 SUPERFAMILY SSF74942 104 173 1.15E-10 T 23-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 Gene3D G3DSA:3.40.710.10 17 271 3.6E-81 T 23-10-2018 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 253 2.2E-76 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 1.4E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 1.4E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 1.4E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 SUPERFAMILY SSF69189 273 365 1.0E-23 T 23-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 Gene3D G3DSA:2.60.410.10 273 363 2.9E-26 T 23-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 363 4.6E-23 T 23-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 SUPERFAMILY SSF56601 4 273 1.22E-75 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_07185 bcbed6842a2b77e6277fed458b5b1019 382 SMART SM00936 273 363 5.9E-32 T 23-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 SUPERFAMILY SSF54821 108 206 1.57E-40 T 23-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 Gene3D G3DSA:3.30.300.20 18 107 2.4E-26 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 SUPERFAMILY SSF54814 2 106 1.13E-35 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 SMART SM00322 60 125 7.3E-6 T 23-10-2018 IPR004087 K Homology domain GO:0003676 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.0E-95 T 23-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 23-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.295 T 23-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 Pfam PF07650 KH domain 39 110 1.3E-17 T 23-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15960 45b2dd303851e4a5bcc9eadfa5d87702 250 Gene3D G3DSA:3.30.1140.32 108 208 3.7E-45 T 23-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 PIRSF PIRSF500125 4 519 8.8E-235 T 23-10-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 Gene3D G3DSA:2.40.110.10 155 281 3.1E-38 T 23-10-2018 CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 PIRSF PIRSF000331 16 502 6.2E-181 T 23-10-2018 IPR004925 HpaB/PvcC/4-BUDH CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 Gene3D G3DSA:1.20.140.10 282 479 4.1E-62 T 23-10-2018 CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 20 283 1.4E-89 T 23-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 297 490 3.0E-62 T 23-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 SUPERFAMILY SSF56645 18 283 8.25E-82 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 Gene3D G3DSA:1.10.3140.10 19 153 1.3E-42 T 23-10-2018 CDG60_14185 fa94863a1bd6c45876e194bc19d3334c 519 SUPERFAMILY SSF47203 274 490 1.32E-43 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_04850 a93060180e167cb59f69eb01d8062230 252 Pfam PF02237 Biotin protein ligase C terminal domain 205 241 2.3E-4 T 23-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG60_04850 a93060180e167cb59f69eb01d8062230 252 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 25 245 4.1E-38 T 23-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG60_04850 a93060180e167cb59f69eb01d8062230 252 SUPERFAMILY SSF50037 202 247 7.78E-5 T 23-10-2018 IPR008988 Transcriptional repressor, C-terminal CDG60_04850 a93060180e167cb59f69eb01d8062230 252 SUPERFAMILY SSF55681 18 191 9.94E-36 T 23-10-2018 CDG60_04850 a93060180e167cb59f69eb01d8062230 252 Pfam PF03099 Biotin/lipoate A/B protein ligase family 38 141 6.3E-11 T 23-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDG60_04850 a93060180e167cb59f69eb01d8062230 252 Gene3D G3DSA:3.30.930.10 1 201 1.7E-38 T 23-10-2018 CDG60_03150 112374b2f36a06121a317ffd62f9c223 216 Pfam PF00694 Aconitase C-terminal domain 1 132 7.6E-38 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDG60_03150 112374b2f36a06121a317ffd62f9c223 216 SUPERFAMILY SSF52016 1 201 8.83E-61 T 23-10-2018 CDG60_03150 112374b2f36a06121a317ffd62f9c223 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 5.1E-85 T 23-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDG60_03150 112374b2f36a06121a317ffd62f9c223 216 Gene3D G3DSA:3.20.19.10 1 184 1.5E-76 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDG60_03150 112374b2f36a06121a317ffd62f9c223 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 42.844 T 23-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDG60_03960 5b9b38d7ff2f9847ec7a19a49adaa4b8 387 PRINTS PR00075 Fatty acid desaturase family 1 signature 62 82 1.7E-31 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG60_03960 5b9b38d7ff2f9847ec7a19a49adaa4b8 387 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 1.7E-31 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG60_03960 5b9b38d7ff2f9847ec7a19a49adaa4b8 387 PRINTS PR00075 Fatty acid desaturase family 1 signature 100 129 1.7E-31 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG60_03960 5b9b38d7ff2f9847ec7a19a49adaa4b8 387 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 1.7E-31 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG60_03960 5b9b38d7ff2f9847ec7a19a49adaa4b8 387 PRINTS PR00075 Fatty acid desaturase family 1 signature 12 32 1.7E-31 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG60_03960 5b9b38d7ff2f9847ec7a19a49adaa4b8 387 Pfam PF00487 Fatty acid desaturase 42 268 5.1E-20 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG60_03960 5b9b38d7ff2f9847ec7a19a49adaa4b8 387 PIRSF PIRSF000345 5 359 1.5E-97 T 23-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 CDG60_09430 755b80ddfff0c045ca243be6b258079b 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 217 2.1E-17 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG60_09430 755b80ddfff0c045ca243be6b258079b 232 Gene3D G3DSA:3.40.50.1240 1 228 2.6E-30 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_09430 755b80ddfff0c045ca243be6b258079b 232 SMART SM00855 3 176 3.1E-10 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG60_09430 755b80ddfff0c045ca243be6b258079b 232 SUPERFAMILY SSF53254 1 222 7.2E-32 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 Pfam PF00682 HMGL-like 33 313 1.6E-75 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 550 7.1E-225 T 23-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 551 51.767 T 23-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 SUPERFAMILY SSF51569 22 330 2.38E-97 T 23-10-2018 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 SUPERFAMILY SSF89000 388 437 2.82E-15 T 23-10-2018 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 1.2E-24 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 SMART SM00917 422 550 9.0E-26 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 Gene3D G3DSA:3.30.160.270 377 549 6.3E-53 T 23-10-2018 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 Gene3D G3DSA:3.20.20.70 10 376 2.6E-150 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 SUPERFAMILY SSF110921 449 549 9.15E-29 T 23-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15620 1479661efb3af5ca5f7f3a8ae61bbc15 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_00890 2fd9217e246b16c8ac1a7042af4a0702 183 Pfam PF14066 Protein of unknown function (DUF4256) 12 182 1.1E-75 T 23-10-2018 IPR025352 Protein of unknown function DUF4256 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 PIRSF PIRSF006621 3 333 4.4E-77 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 Pfam PF01207 Dihydrouridine synthase (Dus) 17 313 7.3E-87 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 331 49.116 T 23-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 Gene3D G3DSA:3.20.20.70 11 251 8.8E-72 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 SUPERFAMILY SSF51395 13 318 5.0E-70 T 23-10-2018 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 316 2.7E-138 T 23-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CDG60_03460 ad68f27ee59127948b1d08a0994ce84f 340 Gene3D G3DSA:1.20.120.1460 254 335 5.3E-17 T 23-10-2018 CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 Pfam PF00005 ABC transporter 377 530 2.7E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 Gene3D G3DSA:3.40.50.300 351 610 1.1E-88 T 23-10-2018 CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 SMART SM00382 385 576 3.9E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 SUPERFAMILY SSF52540 350 600 6.03E-88 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 Gene3D G3DSA:1.20.1560.10 26 348 7.7E-26 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 SUPERFAMILY SSF90123 24 339 9.55E-47 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_09295 3c95ea6ddcf141d3e3efef9c7600bc61 617 Pfam PF00664 ABC transporter transmembrane region 41 308 3.8E-16 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 Gene3D G3DSA:3.90.1150.10 250 359 3.3E-44 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 Pfam PF00266 Aminotransferase class-V 4 347 1.1E-52 T 23-10-2018 IPR000192 Aminotransferase class V domain CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 Gene3D G3DSA:3.40.640.10 16 249 1.4E-91 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 3.9E-157 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 50.269 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 PIRSF PIRSF000525 1 359 7.4E-150 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 23-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDG60_06530 1d395703c1e53b1e85e52ce21391a8b1 359 SUPERFAMILY SSF53383 2 357 6.29E-116 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 Gene3D G3DSA:1.10.287.470 111 143 1.9E-11 T 23-10-2018 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 Gene3D G3DSA:1.10.287.470 144 218 1.3E-6 T 23-10-2018 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 360 375 4.2E-7 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 89 109 4.2E-7 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 SUPERFAMILY SSF111369 81 161 9.68E-11 T 23-10-2018 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 Gene3D G3DSA:2.40.30.170 258 375 9.6E-38 T 23-10-2018 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 SUPERFAMILY SSF111369 149 298 3.92E-9 T 23-10-2018 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 Gene3D G3DSA:2.40.50.100 78 110 1.9E-11 T 23-10-2018 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 Pfam PF13437 HlyD family secretion protein 244 363 1.3E-15 T 23-10-2018 CDG60_13775 84974e4e5b735827a9df2d4c03642992 375 Pfam PF13533 Biotin-lipoyl like 81 125 2.4E-9 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 Pfam PF00773 RNB domain 261 586 3.0E-106 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 ProSitePatterns PS01175 Ribonuclease II family signature. 554 578 - T 23-10-2018 IPR022966 Ribonuclease II/R, conserved site CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 82 713 1.9E-189 T 23-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 SMART SM00316 630 713 6.6E-11 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 Gene3D G3DSA:2.40.50.140 74 148 1.1E-6 T 23-10-2018 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 Gene3D G3DSA:2.40.50.140 633 742 5.5E-21 T 23-10-2018 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 SUPERFAMILY SSF50249 229 630 1.31E-138 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 Pfam PF08206 Ribonuclease B OB domain 89 139 1.3E-7 T 23-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 SMART SM00955 261 587 3.0E-171 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 TIGRFAM TIGR02063 RNase_R: ribonuclease R 21 713 1.4E-232 T 23-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 Pfam PF00575 S1 RNA binding domain 631 711 3.8E-11 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 Hamap MF_01895 Ribonuclease R [rnr]. 40 713 50.538 T 23-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 SUPERFAMILY SSF50249 631 722 1.58E-19 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 SUPERFAMILY SSF50249 138 239 1.29E-10 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_15775 5cc2797d43a775c52396983ad82ad1ba 811 SUPERFAMILY SSF50249 72 147 1.29E-8 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_11210 9f72df9fb793929cb5939c924a091324 524 SMART SM00798 133 456 6.5E-208 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 Gene3D G3DSA:3.40.140.20 209 365 1.1E-55 T 23-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 SUPERFAMILY SSF53927 212 524 4.11E-128 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 455 9.8E-117 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 Gene3D G3DSA:3.40.140.20 387 524 1.8E-60 T 23-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 1.4E-235 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 524 45.199 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 Gene3D G3DSA:3.40.50.1380 1 196 1.9E-85 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG60_11210 9f72df9fb793929cb5939c924a091324 524 SUPERFAMILY SSF52335 3 191 1.96E-71 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG60_11210 9f72df9fb793929cb5939c924a091324 524 Pfam PF02142 MGS-like domain 15 128 3.4E-30 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG60_11210 9f72df9fb793929cb5939c924a091324 524 PIRSF PIRSF000414 1 524 2.1E-220 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_11210 9f72df9fb793929cb5939c924a091324 524 SMART SM00851 15 128 2.0E-60 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG60_01330 794133ac7c8978719f18987fd8508304 690 Pfam PF00665 Integrase core domain 266 405 7.5E-12 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_01330 794133ac7c8978719f18987fd8508304 690 SUPERFAMILY SSF53098 292 451 4.17E-5 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_01330 794133ac7c8978719f18987fd8508304 690 Gene3D G3DSA:3.30.420.10 257 468 2.7E-18 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_02550 db5832f82c0ee0f795321d5e68f2e4f8 135 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 104 3.0E-47 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG60_02550 db5832f82c0ee0f795321d5e68f2e4f8 135 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 3.9E-26 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG60_02550 db5832f82c0ee0f795321d5e68f2e4f8 135 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 117 25.192 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG60_02550 db5832f82c0ee0f795321d5e68f2e4f8 135 Gene3D G3DSA:3.30.300.20 2 111 3.1E-36 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_02550 db5832f82c0ee0f795321d5e68f2e4f8 135 Pfam PF02033 Ribosome-binding factor A 6 114 2.9E-31 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG60_02550 db5832f82c0ee0f795321d5e68f2e4f8 135 SUPERFAMILY SSF89919 1 110 3.4E-32 T 23-10-2018 IPR023799 Ribosome-binding factor A domain superfamily CDG60_03690 1142adeaa4f7e4ef7e3efa298cd6757a 273 SUPERFAMILY SSF53098 3 221 2.77E-31 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_03690 1142adeaa4f7e4ef7e3efa298cd6757a 273 Gene3D G3DSA:3.30.420.10 5 214 7.4E-19 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_03690 1142adeaa4f7e4ef7e3efa298cd6757a 273 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 254 2.9E-72 T 23-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like CDG60_11865 3b619268850d413e219325a3b1c96acf 448 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 14 440 37.155 T 23-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 307 330 - T 23-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CDG60_11865 3b619268850d413e219325a3b1c96acf 448 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 48 63 - T 23-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CDG60_11865 3b619268850d413e219325a3b1c96acf 448 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.3E-31 T 23-10-2018 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 1.3E-31 T 23-10-2018 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 1.3E-31 T 23-10-2018 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.3E-31 T 23-10-2018 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 1.3E-31 T 23-10-2018 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 PRINTS PR00173 Glutamate-aspartate symporter signature 157 179 1.3E-31 T 23-10-2018 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.3E-31 T 23-10-2018 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 Gene3D G3DSA:1.10.3860.10 11 431 1.7E-120 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 Pfam PF00375 Sodium:dicarboxylate symporter family 21 413 4.0E-108 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG60_11865 3b619268850d413e219325a3b1c96acf 448 SUPERFAMILY SSF118215 21 414 1.96E-117 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_18070 68dd3fc7667788108e9911f6e934729d 175 SUPERFAMILY SSF53271 5 172 2.75E-50 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_18070 68dd3fc7667788108e9911f6e934729d 175 Pfam PF00156 Phosphoribosyl transferase domain 14 160 8.4E-24 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG60_18070 68dd3fc7667788108e9911f6e934729d 175 Gene3D G3DSA:3.40.50.2020 2 174 5.6E-61 T 23-10-2018 CDG60_18070 68dd3fc7667788108e9911f6e934729d 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.9E-66 T 23-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CDG60_08900 4a699bc1c64129b939ab89caaf2a9272 175 SUPERFAMILY SSF52540 3 169 2.67E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_08900 4a699bc1c64129b939ab89caaf2a9272 175 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 2.3E-58 T 23-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CDG60_08900 4a699bc1c64129b939ab89caaf2a9272 175 Gene3D G3DSA:3.40.50.300 2 169 6.7E-56 T 23-10-2018 CDG60_08900 4a699bc1c64129b939ab89caaf2a9272 175 PIRSF PIRSF006135 1 171 6.6E-56 T 23-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 Gene3D G3DSA:3.30.70.20 114 163 1.1E-5 T 23-10-2018 CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 Gene3D G3DSA:3.20.20.20 6 69 1.1E-5 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 146 1.9E-55 T 23-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 Pfam PF14697 4Fe-4S dicluster domain 85 138 6.1E-16 T 23-10-2018 CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 Pfam PF04060 Putative Fe-S cluster 15 47 1.0E-9 T 23-10-2018 IPR007202 4Fe-4S domain GO:0051536 CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 Gene3D G3DSA:3.30.70.20 70 110 6.2E-7 T 23-10-2018 CDG60_12715 a5905bc4d5edd2a77278573a9b9b96f7 266 SUPERFAMILY SSF54862 10 142 1.12E-23 T 23-10-2018 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 Gene3D G3DSA:3.40.50.720 208 372 5.8E-167 T 23-10-2018 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 Gene3D G3DSA:3.40.50.10860 54 189 5.8E-167 T 23-10-2018 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 2.9E-86 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 SUPERFAMILY SSF51735 201 446 6.17E-77 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_12705 ab804a3490921d2957369c8421c92e49 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 9.3E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 9.3E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 9.3E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 9.3E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 183 1.8E-48 T 23-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 Gene3D G3DSA:1.10.285.10 8 383 5.8E-167 T 23-10-2018 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 23-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 SUPERFAMILY SSF53223 6 195 2.97E-73 T 23-10-2018 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 SMART SM00839 203 445 6.4E-87 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 Gene3D G3DSA:1.10.285.10 384 447 3.3E-12 T 23-10-2018 CDG60_12705 ab804a3490921d2957369c8421c92e49 447 PIRSF PIRSF000185 21 447 4.0E-115 T 23-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 2.3E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 2.3E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 2.3E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 2.3E-30 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 474 3.5E-169 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 317 1.0E-129 T 23-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 SMART SM00840 353 415 2.0E-12 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 SUPERFAMILY SSF52374 5 316 5.36E-95 T 23-10-2018 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 475 37.645 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 Gene3D G3DSA:3.40.50.620 1 309 1.5E-135 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 SUPERFAMILY SSF47323 340 475 1.18E-29 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 Pfam PF09190 DALR domain 353 413 1.3E-15 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_01235 86ed063be67f2b2e3eaa1e897f9ce556 477 Gene3D G3DSA:1.20.120.640 310 475 9.3E-36 T 23-10-2018 CDG60_14235 9f2f15c2687bcc40a39b5865ed71efc4 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG60_14235 9f2f15c2687bcc40a39b5865ed71efc4 479 Gene3D G3DSA:3.40.605.10 22 468 1.2E-177 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_14235 9f2f15c2687bcc40a39b5865ed71efc4 479 Pfam PF00171 Aldehyde dehydrogenase family 24 473 1.8E-168 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_14235 9f2f15c2687bcc40a39b5865ed71efc4 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG60_14235 9f2f15c2687bcc40a39b5865ed71efc4 479 Gene3D G3DSA:3.40.309.10 258 445 1.2E-177 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_14235 9f2f15c2687bcc40a39b5865ed71efc4 479 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 28 471 3.5E-202 T 23-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CDG60_14235 9f2f15c2687bcc40a39b5865ed71efc4 479 SUPERFAMILY SSF53720 5 477 1.3E-164 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 Gene3D G3DSA:1.10.1200.80 258 332 8.7E-14 T 23-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 8 328 46.794 T 23-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 Gene3D G3DSA:3.20.20.70 13 256 3.9E-76 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 Pfam PF01207 Dihydrouridine synthase (Dus) 21 321 9.8E-100 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 18 326 4.9E-116 T 23-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 PIRSF PIRSF006621 8 334 7.6E-102 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 SUPERFAMILY SSF51395 18 325 2.56E-88 T 23-10-2018 CDG60_11615 4127c95290ef4b5b3c21f1326876cd66 348 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 101 119 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_06540 f6dae95a021cbcceeeea811934f90144 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 4 150 27.894 T 23-10-2018 IPR003791 Protein of unknown function UPF0178 CDG60_06540 f6dae95a021cbcceeeea811934f90144 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 21 149 6.9E-47 T 23-10-2018 IPR003791 Protein of unknown function UPF0178 CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 Gene3D G3DSA:3.90.1150.10 109 442 1.7E-70 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 SUPERFAMILY SSF46785 10 71 2.39E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 68 2.1E-11 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 Gene3D G3DSA:1.10.10.10 4 69 3.7E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 SMART SM00345 9 68 3.5E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 SUPERFAMILY SSF53383 63 458 9.79E-75 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 Gene3D G3DSA:3.40.640.10 139 355 1.7E-70 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_09365 40adf3c6d946ae501a9977a91ea27c72 462 Pfam PF00155 Aminotransferase class I and II 123 443 2.5E-35 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_15625 e575d22816b283f4372e0af1f02c770d 386 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 373 29.128 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDG60_15625 e575d22816b283f4372e0af1f02c770d 386 SUPERFAMILY SSF53474 12 374 3.27E-99 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_15625 e575d22816b283f4372e0af1f02c770d 386 Gene3D G3DSA:1.10.1740.110 186 291 3.0E-140 T 23-10-2018 CDG60_15625 e575d22816b283f4372e0af1f02c770d 386 PIRSF PIRSF000443 2 380 2.1E-134 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDG60_15625 e575d22816b283f4372e0af1f02c770d 386 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 372 5.1E-140 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDG60_15625 e575d22816b283f4372e0af1f02c770d 386 Gene3D G3DSA:3.40.50.1820 24 359 3.0E-140 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_15625 e575d22816b283f4372e0af1f02c770d 386 Pfam PF00561 alpha/beta hydrolase fold 49 358 1.3E-32 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_10800 40fed8650f3ab16eb6c4a8bbd6c394ba 347 SUPERFAMILY SSF53474 71 330 3.27E-33 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_10800 40fed8650f3ab16eb6c4a8bbd6c394ba 347 Pfam PF12146 Serine aminopeptidase, S33 88 323 4.1E-34 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG60_10800 40fed8650f3ab16eb6c4a8bbd6c394ba 347 Gene3D G3DSA:3.40.50.1820 70 343 8.1E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Gene3D G3DSA:3.30.450.40 2 168 1.0E-47 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 184 736 1.6E-127 T 23-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Gene3D G3DSA:3.50.30.10 184 411 4.9E-58 T 23-10-2018 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 SMART SM00065 21 168 4.8E-22 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 SUPERFAMILY SSF52009 304 424 7.85E-27 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 431 718 2.5E-95 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Gene3D G3DSA:3.20.20.60 412 752 3.4E-105 T 23-10-2018 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Gene3D G3DSA:1.10.274.10 201 325 4.9E-58 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Pfam PF13185 GAF domain 20 158 4.2E-14 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 3.8E-23 T 23-10-2018 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 3.8E-23 T 23-10-2018 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 3.8E-23 T 23-10-2018 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 3.8E-23 T 23-10-2018 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 SUPERFAMILY SSF51621 432 727 4.19E-98 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 6.4E-17 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 Pfam PF05524 PEP-utilising enzyme, N-terminal 183 305 2.9E-22 T 23-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 SUPERFAMILY SSF55781 4 162 5.02E-32 T 23-10-2018 CDG60_03105 e6817d7f9710d007bc7d960e61dd1c37 765 SUPERFAMILY SSF47831 209 320 8.11E-25 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CDG60_06520 4c7feb6287e69f102979bc8f92377353 380 Gene3D G3DSA:2.40.50.100 94 292 4.3E-26 T 23-10-2018 CDG60_06520 4c7feb6287e69f102979bc8f92377353 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 84 322 3.9E-10 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG60_06520 4c7feb6287e69f102979bc8f92377353 380 SUPERFAMILY SSF111369 84 150 4.05E-5 T 23-10-2018 CDG60_06520 4c7feb6287e69f102979bc8f92377353 380 Gene3D G3DSA:2.40.30.170 84 351 4.3E-26 T 23-10-2018 CDG60_06520 4c7feb6287e69f102979bc8f92377353 380 Gene3D G3DSA:1.10.287.470 128 257 4.3E-26 T 23-10-2018 CDG60_06520 4c7feb6287e69f102979bc8f92377353 380 SUPERFAMILY SSF111369 164 326 4.45E-7 T 23-10-2018 CDG60_08425 7bb2e2c7ae443ed535099543f207255f 224 Gene3D G3DSA:3.30.2010.10 127 217 1.3E-14 T 23-10-2018 CDG60_08425 7bb2e2c7ae443ed535099543f207255f 224 Pfam PF01863 Protein of unknown function DUF45 18 216 4.3E-42 T 23-10-2018 IPR002725 Protein of unknown function DUF45 CDG60_14720 5fe64407b46d08038eaa8c4d4917a971 484 Pfam PF13644 DKNYY family 64 280 3.9E-11 T 23-10-2018 IPR027375 DKNYY family CDG60_09920 ef35ca78734d30506e84682a7b3f1117 445 SUPERFAMILY SSF63411 251 440 6.7E-32 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_09920 ef35ca78734d30506e84682a7b3f1117 445 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 57 80 - T 23-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CDG60_09920 ef35ca78734d30506e84682a7b3f1117 445 Gene3D G3DSA:3.30.830.10 247 439 9.6E-47 T 23-10-2018 CDG60_09920 ef35ca78734d30506e84682a7b3f1117 445 Gene3D G3DSA:3.30.830.10 22 243 6.7E-78 T 23-10-2018 CDG60_09920 ef35ca78734d30506e84682a7b3f1117 445 Pfam PF05193 Peptidase M16 inactive domain 190 369 1.3E-32 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG60_09920 ef35ca78734d30506e84682a7b3f1117 445 SUPERFAMILY SSF63411 26 239 1.5E-59 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_09920 ef35ca78734d30506e84682a7b3f1117 445 Pfam PF00675 Insulinase (Peptidase family M16) 36 181 4.7E-24 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG60_13845 2eb928f902dd9943e78cec2cbefdd1f7 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 14 137 5.3E-48 T 23-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13845 2eb928f902dd9943e78cec2cbefdd1f7 180 Gene3D G3DSA:3.30.70.3270 31 173 5.6E-41 T 23-10-2018 CDG60_13845 2eb928f902dd9943e78cec2cbefdd1f7 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_13845 2eb928f902dd9943e78cec2cbefdd1f7 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_13845 2eb928f902dd9943e78cec2cbefdd1f7 180 SUPERFAMILY SSF54862 40 156 4.06E-27 T 23-10-2018 CDG60_13845 2eb928f902dd9943e78cec2cbefdd1f7 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 7.8E-12 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG60_13845 2eb928f902dd9943e78cec2cbefdd1f7 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 5 163 27.823 T 23-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 Gene3D G3DSA:3.30.43.10 1 71 6.9E-21 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 Pfam PF01565 FAD binding domain 22 145 1.0E-21 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 348 73.024 T 23-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 Gene3D G3DSA:3.30.465.10 73 222 2.7E-52 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 SUPERFAMILY SSF56194 208 338 1.03E-43 T 23-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 SUPERFAMILY SSF56176 9 196 7.48E-38 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 Gene3D G3DSA:3.90.78.10 223 340 6.6E-38 T 23-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 329 1.4E-64 T 23-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_10810 c92e8847d812b7969148e2b073a279b6 348 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 332 3.8E-30 T 23-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 SUPERFAMILY SSF50156 257 367 2.23E-22 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 SUPERFAMILY SSF50494 58 283 4.28E-62 T 23-10-2018 IPR009003 Peptidase S1, PA clan CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 Pfam PF13180 PDZ domain 286 374 7.4E-17 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 7.0E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 7.0E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 7.0E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 PRINTS PR00834 HtrA/DegQ protease family signature 183 207 7.0E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 PRINTS PR00834 HtrA/DegQ protease family signature 323 335 7.0E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 7.0E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 Gene3D G3DSA:2.30.42.10 281 386 1.8E-22 T 23-10-2018 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 SMART SM00228 286 365 2.6E-17 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 Pfam PF13365 Trypsin-like peptidase domain 114 247 1.2E-31 T 23-10-2018 CDG60_12830 f405807dc1b22b333f62fed96bdc8da3 392 Gene3D G3DSA:2.40.10.120 58 279 1.5E-76 T 23-10-2018 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 93 116 - T 23-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 Pfam PF00355 Rieske [2Fe-2S] domain 51 134 1.4E-22 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 SUPERFAMILY SSF55961 170 452 2.75E-54 T 23-10-2018 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 Gene3D G3DSA:3.90.380.10 28 445 2.4E-101 T 23-10-2018 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 SUPERFAMILY SSF50022 19 163 9.82E-47 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 13 450 1.6E-292 T 23-10-2018 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 200 393 5.7E-10 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 Gene3D G3DSA:2.102.10.10 50 174 2.4E-101 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 107 127 1.8E-36 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 65 80 1.8E-36 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 86 106 1.8E-36 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 192 214 1.8E-36 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 35 60 1.8E-36 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_11300 b1eef9864ab632f4a9d49ecdda657847 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 1.8E-36 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_11335 d1d09519d8dfff0e09e86dc5f49af4eb 412 Gene3D G3DSA:3.50.50.60 4 322 1.0E-127 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_11335 d1d09519d8dfff0e09e86dc5f49af4eb 412 Gene3D G3DSA:3.30.9.40 65 271 1.0E-127 T 23-10-2018 CDG60_11335 d1d09519d8dfff0e09e86dc5f49af4eb 412 SUPERFAMILY SSF51905 2 356 2.41E-20 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.3E-23 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 Pfam PF00072 Response regulator receiver domain 10 119 1.7E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 Gene3D G3DSA:3.40.50.2300 1 129 8.3E-36 T 23-10-2018 CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 SMART SM00448 8 118 3.0E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 SMART SM00862 155 231 2.8E-25 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 Gene3D G3DSA:1.10.10.10 130 238 8.7E-41 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 SUPERFAMILY SSF46894 135 232 4.82E-28 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_05080 34dbbdfc8e047eb4f58b0a233fc2ada6 238 SUPERFAMILY SSF52172 8 130 3.98E-37 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_13895 1b7b4fc21868960e3287ca550625b0e2 396 Gene3D G3DSA:3.10.310.10 181 374 1.2E-152 T 23-10-2018 CDG60_13895 1b7b4fc21868960e3287ca550625b0e2 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 394 8.7E-231 T 23-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 CDG60_13895 1b7b4fc21868960e3287ca550625b0e2 396 SUPERFAMILY SSF54506 2 182 3.77E-71 T 23-10-2018 CDG60_13895 1b7b4fc21868960e3287ca550625b0e2 396 Gene3D G3DSA:3.10.310.10 11 388 1.2E-152 T 23-10-2018 CDG60_13895 1b7b4fc21868960e3287ca550625b0e2 396 SUPERFAMILY SSF54506 189 393 1.41E-77 T 23-10-2018 CDG60_13895 1b7b4fc21868960e3287ca550625b0e2 396 Pfam PF04303 PrpF protein 6 391 2.0E-176 T 23-10-2018 IPR007400 PrpF protein CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.1E-54 T 23-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 SMART SM00562 3 140 3.0E-86 T 23-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.984 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 SUPERFAMILY SSF54919 1 141 1.7E-56 T 23-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 Gene3D G3DSA:3.30.70.141 1 143 1.6E-59 T 23-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.0E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.0E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.0E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.0E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_15170 8a690823673e0079853ac8d9f0e2bf6c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.0E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG60_06845 5364646770d9044107e0c5d3ed3f326b 297 SUPERFAMILY SSF161098 25 279 1.14E-54 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_06845 5364646770d9044107e0c5d3ed3f326b 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 283 1.2E-18 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_06845 5364646770d9044107e0c5d3ed3f326b 297 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 282 5.4E-98 T 23-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDG60_06845 5364646770d9044107e0c5d3ed3f326b 297 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 26 285 4.1E-127 T 23-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CDG60_06845 5364646770d9044107e0c5d3ed3f326b 297 Gene3D G3DSA:1.10.3720.10 27 287 7.4E-63 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 6.8E-5 T 23-10-2018 CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.6E-65 T 23-10-2018 CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 2.0E-94 T 23-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.9E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.9E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.9E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 Gene3D G3DSA:3.40.50.720 1 244 3.0E-81 T 23-10-2018 CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.5E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.5E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.5E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.5E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.5E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04995 c4d8a90cfcfb6d2e5820449ee53bf824 244 SUPERFAMILY SSF51735 5 243 3.18E-83 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 SUPERFAMILY SSF52518 119 547 5.0E-87 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 934 2.1E-50 T 23-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 SMART SM00861 593 786 3.9E-57 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Gene3D G3DSA:1.10.287.1150 82 164 1.1E-25 T 23-10-2018 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 4.7E-61 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 933 0.0 T 23-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 PIRSF PIRSF000157 1 936 0.0 T 23-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Gene3D G3DSA:3.40.50.11610 723 930 1.4E-161 T 23-10-2018 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Pfam PF00676 Dehydrogenase E1 component 210 515 3.2E-51 T 23-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Gene3D G3DSA:3.40.50.970 165 525 8.9E-147 T 23-10-2018 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Gene3D G3DSA:3.40.50.12470 556 802 1.4E-161 T 23-10-2018 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 14 50 8.0E-14 T 23-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG60_05600 e072b80f37598428e34579a6ebf86c97 945 SUPERFAMILY SSF52518 576 793 5.0E-46 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_04185 f0bc2ed31fa6059f6bba183d6386ade0 142 Pfam PF00572 Ribosomal protein L13 15 138 4.0E-56 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDG60_04185 f0bc2ed31fa6059f6bba183d6386ade0 142 PIRSF PIRSF002181 1 142 1.7E-49 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDG60_04185 f0bc2ed31fa6059f6bba183d6386ade0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 1.4E-63 T 23-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_04185 f0bc2ed31fa6059f6bba183d6386ade0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.61 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDG60_04185 f0bc2ed31fa6059f6bba183d6386ade0 142 SUPERFAMILY SSF52161 1 140 1.96E-58 T 23-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_04185 f0bc2ed31fa6059f6bba183d6386ade0 142 Gene3D G3DSA:3.90.1180.10 1 142 8.0E-62 T 23-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_13395 7891ef796a31c316113d77f39e324359 664 Pfam PF01522 Polysaccharide deacetylase 94 258 1.5E-24 T 23-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CDG60_13395 7891ef796a31c316113d77f39e324359 664 Gene3D G3DSA:3.20.20.80 302 661 9.0E-137 T 23-10-2018 CDG60_13395 7891ef796a31c316113d77f39e324359 664 Gene3D G3DSA:3.20.20.370 29 296 9.1E-70 T 23-10-2018 CDG60_13395 7891ef796a31c316113d77f39e324359 664 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 38 658 1.8E-261 T 23-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 CDG60_13395 7891ef796a31c316113d77f39e324359 664 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 313 637 5.7E-144 T 23-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CDG60_13395 7891ef796a31c316113d77f39e324359 664 SUPERFAMILY SSF88713 53 271 2.14E-33 T 23-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CDG60_13270 a1f9a7ac4ce73071009d2b7881535c91 676 Gene3D G3DSA:2.170.130.10 36 170 3.8E-38 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_13270 a1f9a7ac4ce73071009d2b7881535c91 676 SUPERFAMILY SSF56935 41 671 1.62E-124 T 23-10-2018 CDG60_13270 a1f9a7ac4ce73071009d2b7881535c91 676 Gene3D G3DSA:2.40.170.20 176 675 3.7E-117 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_13270 a1f9a7ac4ce73071009d2b7881535c91 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 9.7E-29 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_13270 a1f9a7ac4ce73071009d2b7881535c91 676 Pfam PF00593 TonB dependent receptor 208 669 4.6E-53 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_06105 3b7eab4b0ab4413a72419771c85027e0 238 Gene3D G3DSA:2.40.240.20 1 66 8.8E-21 T 23-10-2018 CDG60_06105 3b7eab4b0ab4413a72419771c85027e0 238 PIRSF PIRSF015601 1 238 3.3E-61 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG60_06105 3b7eab4b0ab4413a72419771c85027e0 238 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 236 8.7E-62 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG60_06105 3b7eab4b0ab4413a72419771c85027e0 238 Gene3D G3DSA:3.40.1280.10 73 238 1.4E-53 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_06105 3b7eab4b0ab4413a72419771c85027e0 238 SUPERFAMILY SSF75217 73 236 2.92E-48 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_06105 3b7eab4b0ab4413a72419771c85027e0 238 SUPERFAMILY SSF88697 1 66 4.47E-16 T 23-10-2018 IPR015947 PUA-like superfamily CDG60_06105 3b7eab4b0ab4413a72419771c85027e0 238 Pfam PF04452 RNA methyltransferase 16 234 8.2E-69 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG60_13225 52108a1f87cf53283c2f2c1153048605 224 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 9 223 7.4E-99 T 23-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_13225 52108a1f87cf53283c2f2c1153048605 224 SUPERFAMILY SSF53955 51 220 5.34E-60 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_13225 52108a1f87cf53283c2f2c1153048605 224 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 7 224 37.941 T 23-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_13225 52108a1f87cf53283c2f2c1153048605 224 Gene3D G3DSA:1.10.3810.10 49 223 9.4E-59 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_13225 52108a1f87cf53283c2f2c1153048605 224 Pfam PF00912 Transglycosylase 54 218 4.8E-57 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_11130 da4ba91ea96ed4f33e7817f24feab983 346 Gene3D G3DSA:1.10.10.60 239 345 2.4E-22 T 23-10-2018 CDG60_11130 da4ba91ea96ed4f33e7817f24feab983 346 SMART SM00342 260 342 1.3E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_11130 da4ba91ea96ed4f33e7817f24feab983 346 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 296 338 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG60_11130 da4ba91ea96ed4f33e7817f24feab983 346 SUPERFAMILY SSF46689 295 344 1.39E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_11130 da4ba91ea96ed4f33e7817f24feab983 346 Pfam PF12833 Helix-turn-helix domain 266 343 7.8E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_11130 da4ba91ea96ed4f33e7817f24feab983 346 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 36 211 2.7E-19 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_07340 91ffc8baab1e1b28a6b336c39d4a65a3 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 8 277 74.295 T 23-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CDG60_07340 91ffc8baab1e1b28a6b336c39d4a65a3 278 Pfam PF03618 Kinase/pyrophosphorylase 11 268 8.4E-77 T 23-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 Pfam PF00571 CBS domain 126 179 1.9E-6 T 23-10-2018 IPR000644 CBS domain CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 Pfam PF00571 CBS domain 59 116 5.1E-6 T 23-10-2018 IPR000644 CBS domain CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 SMART SM01091 201 279 5.3E-13 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 Pfam PF03471 Transporter associated domain 206 277 3.6E-16 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 Gene3D G3DSA:3.10.580.10 38 190 4.4E-51 T 23-10-2018 CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 SUPERFAMILY SSF54631 55 191 4.88E-32 T 23-10-2018 CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 SUPERFAMILY SSF56176 206 278 1.23E-14 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 SMART SM00116 131 179 12.0 T 23-10-2018 IPR000644 CBS domain CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 SMART SM00116 67 117 0.19 T 23-10-2018 IPR000644 CBS domain CDG60_02760 97faa0c4ac484ca53563fbf8c0e16f32 279 Gene3D G3DSA:3.30.465.10 201 278 7.6E-19 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 Gene3D G3DSA:3.40.50.1100 25 221 3.4E-183 T 23-10-2018 CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 PIRSF PIRSF001413 2 412 5.8E-165 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 68 393 2.3E-46 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 SUPERFAMILY SSF53686 18 403 5.5E-149 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 Gene3D G3DSA:3.40.50.1100 69 399 3.4E-183 T 23-10-2018 CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 22 404 3.8E-189 T 23-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 17 406 51.922 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_03990 baa4dfd8e060e2d1d9c0c5ac28882d8c 413 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 96 110 - T 23-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 23-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 Pfam PF00318 Ribosomal protein S2 11 226 1.1E-93 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 23-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 Gene3D G3DSA:3.40.50.10490 11 221 2.9E-91 T 23-10-2018 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 40.949 T 23-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 4.0E-103 T 23-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 Gene3D G3DSA:1.10.287.610 105 152 2.9E-91 T 23-10-2018 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 SUPERFAMILY SSF52313 8 232 7.59E-93 T 23-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 PRINTS PR00395 Ribosomal protein S2 signature 160 177 8.3E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 PRINTS PR00395 Ribosomal protein S2 signature 198 212 8.3E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 PRINTS PR00395 Ribosomal protein S2 signature 39 48 8.3E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 PRINTS PR00395 Ribosomal protein S2 signature 89 106 8.3E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 PRINTS PR00395 Ribosomal protein S2 signature 8 26 8.3E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_12485 c61b13896e4574255f3cb6ff3221495e 250 PRINTS PR00395 Ribosomal protein S2 signature 177 188 8.3E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_13155 c11a1e189b90e2e05435897f954ab8d8 576 SUPERFAMILY SSF52540 1 332 2.21E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_13155 c11a1e189b90e2e05435897f954ab8d8 576 Gene3D G3DSA:3.40.50.300 2 340 1.0E-19 T 23-10-2018 CDG60_13155 c11a1e189b90e2e05435897f954ab8d8 576 Pfam PF13175 AAA ATPase domain 1 321 3.5E-18 T 23-10-2018 CDG60_03665 fc31520b65b9a0a1a1c05ee2ff842c22 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 210 2.5E-23 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CDG60_03665 fc31520b65b9a0a1a1c05ee2ff842c22 260 Gene3D G3DSA:3.20.20.150 1 260 1.4E-64 T 23-10-2018 CDG60_03665 fc31520b65b9a0a1a1c05ee2ff842c22 260 PIRSF PIRSF006241 1 260 2.7E-92 T 23-10-2018 IPR026040 Hydroxypyruvate isomerase-like CDG60_03665 fc31520b65b9a0a1a1c05ee2ff842c22 260 SUPERFAMILY SSF51658 1 258 3.04E-66 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily CDG60_15340 4bc261a39428172b9631b7413042b66b 100 Gene3D G3DSA:3.30.70.1060 1 97 2.0E-29 T 23-10-2018 CDG60_15340 4bc261a39428172b9631b7413042b66b 100 Pfam PF03795 YCII-related domain 3 94 1.6E-19 T 23-10-2018 IPR005545 YCII-related CDG60_15340 4bc261a39428172b9631b7413042b66b 100 SUPERFAMILY SSF54909 1 96 1.38E-25 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 PIRSF PIRSF001174 5 788 0.0 T 23-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 SMART SM00382 360 504 7.2E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Gene3D G3DSA:1.20.58.1480 131 255 1.1E-24 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 211 3.2E-26 T 23-10-2018 IPR003111 Lon, substrate-binding domain CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Hamap MF_01973 Lon protease [lon]. 19 785 66.512 T 23-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 583 785 2.6E-85 T 23-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Gene3D G3DSA:1.10.8.60 503 597 3.7E-31 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Gene3D G3DSA:3.40.50.300 326 502 7.6E-63 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 SMART SM00464 18 213 1.6E-62 T 23-10-2018 IPR003111 Lon, substrate-binding domain CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 SUPERFAMILY SSF88697 18 211 2.14E-28 T 23-10-2018 IPR015947 PUA-like superfamily CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 364 500 6.9E-20 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Gene3D G3DSA:2.30.130.40 14 126 1.3E-27 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 TIGRFAM TIGR00763 lon: endopeptidase La 20 783 1.3E-278 T 23-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 SUPERFAMILY SSF54211 608 783 4.17E-54 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 368 387 7.6E-49 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 608 624 7.6E-49 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 7.6E-49 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 739 757 7.6E-49 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 7.6E-49 T 23-10-2018 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 Gene3D G3DSA:3.30.230.10 598 785 3.8E-74 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 689 697 - T 23-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CDG60_12665 270d1ada7a9628e3d62519852a4aa02e 809 SUPERFAMILY SSF52540 325 599 3.42E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 Gene3D G3DSA:3.40.190.10 181 265 2.6E-58 T 23-10-2018 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 PIRSF PIRSF001500 7 369 4.3E-134 T 23-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 Pfam PF00800 Prephenate dehydratase 101 278 2.9E-62 T 23-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 SUPERFAMILY SSF53850 101 285 1.42E-60 T 23-10-2018 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 TIGRFAM TIGR01807 CM_P2: chorismate mutase 14 89 1.2E-25 T 23-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 Gene3D G3DSA:1.20.59.10 14 100 2.4E-30 T 23-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 SMART SM00830 18 99 3.7E-29 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 252 274 - T 23-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 Pfam PF01842 ACT domain 287 351 1.9E-11 T 23-10-2018 IPR002912 ACT domain CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 SUPERFAMILY SSF55021 271 366 9.87E-27 T 23-10-2018 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 Gene3D G3DSA:3.40.190.10 103 274 2.6E-58 T 23-10-2018 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 SUPERFAMILY SSF48600 10 97 1.5E-20 T 23-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 Gene3D G3DSA:3.30.70.260 279 368 2.4E-28 T 23-10-2018 CDG60_11910 8f0609d8135fda8277bd88937e7321aa 369 Pfam PF01817 Chorismate mutase type II 18 96 3.3E-22 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_07810 763598d3b51e06474a4f99c3cb22657e 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 2.9E-25 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG60_07810 763598d3b51e06474a4f99c3cb22657e 324 SUPERFAMILY SSF51735 100 287 1.06E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_07810 763598d3b51e06474a4f99c3cb22657e 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG60_07810 763598d3b51e06474a4f99c3cb22657e 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 1.9E-57 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG60_07810 763598d3b51e06474a4f99c3cb22657e 324 SUPERFAMILY SSF52283 1 132 1.89E-25 T 23-10-2018 CDG60_07810 763598d3b51e06474a4f99c3cb22657e 324 Gene3D G3DSA:3.40.50.720 4 311 6.0E-105 T 23-10-2018 CDG60_07810 763598d3b51e06474a4f99c3cb22657e 324 Gene3D G3DSA:3.40.50.720 97 286 6.0E-105 T 23-10-2018 CDG60_15055 adc1d95e52be165654380d8905443aa1 388 Gene3D G3DSA:3.20.20.10 29 260 2.3E-36 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_15055 adc1d95e52be165654380d8905443aa1 388 Pfam PF01168 Alanine racemase, N-terminal domain 26 261 1.1E-20 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_15055 adc1d95e52be165654380d8905443aa1 388 SUPERFAMILY SSF51419 27 261 3.2E-21 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 SUPERFAMILY SSF74778 2 159 3.4E-67 T 23-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Gene3D G3DSA:1.25.40.310 1 160 1.2E-66 T 23-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 SUPERFAMILY SSF53732 381 864 1.96E-142 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 ProSitePatterns PS00450 Aconitase family signature 1. 710 727 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Gene3D G3DSA:3.40.1060.10 387 689 5.8E-144 T 23-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.3E-66 T 23-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 ProSitePatterns PS01244 Aconitase family signature 2. 770 783 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 SUPERFAMILY SSF52016 162 374 3.92E-64 T 23-10-2018 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Pfam PF00330 Aconitase family (aconitate hydratase) 477 827 7.5E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 PIRSF PIRSF036687 1 868 0.0 T 23-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 863 0.0 T 23-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Gene3D G3DSA:3.20.19.10 162 363 7.8E-72 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Gene3D G3DSA:3.30.499.10 407 534 5.8E-144 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 384 5.7E-91 T 23-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG60_07570 44ea2f05c0ffc3e1ce18d5214e6d016b 879 Gene3D G3DSA:3.30.499.10 691 874 1.6E-66 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 SMART SM00493 79 164 1.8E-19 T 23-10-2018 IPR006171 TOPRIM domain CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 SUPERFAMILY SSF111304 3 197 6.67E-74 T 23-10-2018 IPR023627 Recombination protein RecR CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 Pfam PF13662 Toprim domain 80 170 5.5E-25 T 23-10-2018 IPR006171 TOPRIM domain CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 Pfam PF02132 RecR protein 41 77 3.6E-11 T 23-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 Gene3D G3DSA:1.10.8.420 2 50 4.4E-14 T 23-10-2018 CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 23-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 94.184 T 23-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 Gene3D G3DSA:3.40.1360.10 76 197 5.1E-44 T 23-10-2018 CDG60_09990 2bf5957b3f3ba96488d9100cbfe3d892 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 3.9E-74 T 23-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SMART SM00883 3 95 4.8E-54 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SUPERFAMILY SSF50129 2 95 9.14E-34 T 23-10-2018 IPR011032 GroES-like superfamily CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 23-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 61 73 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Gene3D G3DSA:2.30.33.40 2 96 7.8E-36 T 23-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 26.628 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_00340 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.2E-33 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.8E-14 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.8E-14 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 2.8E-14 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 2.8E-14 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 Gene3D G3DSA:3.50.50.60 117 241 2.1E-87 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 SUPERFAMILY SSF51905 2 312 5.71E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 302 5.1E-58 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 Pfam PF14759 Reductase C-terminal 322 409 1.8E-15 T 23-10-2018 IPR028202 Reductase, C-terminal CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 SUPERFAMILY SSF55424 316 409 1.28E-17 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 Gene3D G3DSA:3.30.390.30 322 410 1.9E-17 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.3E-25 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.3E-25 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.3E-25 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.3E-25 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.3E-25 T 23-10-2018 CDG60_03015 72e89b8a83b7d728adf17c92312ea25b 410 Gene3D G3DSA:3.50.50.60 9 310 2.1E-87 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_14950 e28f072b02410ac7011653581b84b815 506 SUPERFAMILY SSF53067 11 131 8.91E-35 T 23-10-2018 CDG60_14950 e28f072b02410ac7011653581b84b815 506 Gene3D G3DSA:3.30.420.40 12 303 5.0E-91 T 23-10-2018 CDG60_14950 e28f072b02410ac7011653581b84b815 506 Pfam PF02541 Ppx/GppA phosphatase family 25 308 3.1E-82 T 23-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CDG60_14950 e28f072b02410ac7011653581b84b815 506 SUPERFAMILY SSF109604 313 500 2.02E-44 T 23-10-2018 CDG60_14950 e28f072b02410ac7011653581b84b815 506 Pfam PF01966 HD domain 341 418 1.2E-4 T 23-10-2018 IPR006674 HD domain CDG60_14950 e28f072b02410ac7011653581b84b815 506 PIRSF PIRSF001267 1 502 4.6E-196 T 23-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CDG60_14950 e28f072b02410ac7011653581b84b815 506 SUPERFAMILY SSF53067 135 311 1.78E-48 T 23-10-2018 CDG60_14950 e28f072b02410ac7011653581b84b815 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 306 9.0E-98 T 23-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CDG60_14950 e28f072b02410ac7011653581b84b815 506 Gene3D G3DSA:1.10.3210.10 310 505 1.6E-55 T 23-10-2018 CDG60_14950 e28f072b02410ac7011653581b84b815 506 Gene3D G3DSA:3.30.420.150 115 295 5.0E-91 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:1.20.1640.10 517 1038 0.0 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 1.8E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:1.20.1640.10 8 516 0.0 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82693 135 330 1.46E-23 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:3.30.2090.10 726 814 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Pfam PF00873 AcrB/AcrD/AcrF family 1 1041 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82693 677 865 1.96E-24 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82714 182 272 3.14E-24 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82693 38 131 3.14E-29 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:3.30.70.1430 571 673 0.0 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:3.30.70.1430 38 822 0.0 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:3.30.70.1440 674 874 0.0 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82693 569 664 9.94E-25 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82866 837 1041 4.58E-43 T 23-10-2018 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82714 727 814 1.44E-22 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1055 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDG60_05245 0a16362e7b1ae9cad80a0a089a3fd817 1059 SUPERFAMILY SSF82866 296 497 5.1E-46 T 23-10-2018 CDG60_07305 b53afa2e98bc8a9d947c67b8345663fa 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 23-10-2018 IPR030470 UbiA prenyltransferase conserved site CDG60_07305 b53afa2e98bc8a9d947c67b8345663fa 292 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 17.098 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CDG60_07305 b53afa2e98bc8a9d947c67b8345663fa 292 Gene3D G3DSA:1.10.357.140 13 165 1.3E-21 T 23-10-2018 CDG60_07305 b53afa2e98bc8a9d947c67b8345663fa 292 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 277 2.3E-84 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CDG60_07305 b53afa2e98bc8a9d947c67b8345663fa 292 Pfam PF01040 UbiA prenyltransferase family 19 267 6.4E-58 T 23-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CDG60_17770 366eb879f46a6079cb233616f0f66ee5 192 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 173 2.4E-28 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG60_17770 366eb879f46a6079cb233616f0f66ee5 192 SUPERFAMILY SSF55846 10 186 1.7E-64 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG60_17770 366eb879f46a6079cb233616f0f66ee5 192 Gene3D G3DSA:3.40.80.10 8 189 3.9E-59 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG60_17770 366eb879f46a6079cb233616f0f66ee5 192 SMART SM00644 22 172 3.3E-45 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG60_11415 4eb94848f612ab0050d69afbbb7783d7 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 164 8.1E-46 T 23-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG60_11415 4eb94848f612ab0050d69afbbb7783d7 179 Gene3D G3DSA:3.40.50.1000 2 176 2.5E-54 T 23-10-2018 IPR023214 HAD superfamily CDG60_11415 4eb94848f612ab0050d69afbbb7783d7 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 88 146 9.2E-9 T 23-10-2018 CDG60_11415 4eb94848f612ab0050d69afbbb7783d7 179 PIRSF PIRSF006118 2 175 1.5E-61 T 23-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG60_11415 4eb94848f612ab0050d69afbbb7783d7 179 SUPERFAMILY SSF56784 10 171 6.37E-42 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_11415 4eb94848f612ab0050d69afbbb7783d7 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 15 128 2.4E-13 T 23-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CDG60_13870 90e27e56b435d467cb232115db440da3 595 SUPERFAMILY SSF143243 22 225 3.14E-59 T 23-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 134 155 - T 23-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 173 4.0E-41 T 23-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 595 2.1E-98 T 23-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 595 1.4E-161 T 23-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 23-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 Gene3D G3DSA:3.30.460.80 8 153 3.6E-35 T 23-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 155 8.0E-25 T 23-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 22 181 25.628 T 23-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 Gene3D G3DSA:1.10.645.20 210 595 9.4E-142 T 23-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 13 595 68.597 T 23-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CDG60_13870 90e27e56b435d467cb232115db440da3 595 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 1.3E-40 T 23-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 595 40.628 T 23-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13870 90e27e56b435d467cb232115db440da3 595 SUPERFAMILY SSF56762 221 595 1.83E-119 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 SUPERFAMILY SSF51905 373 579 1.49E-16 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 SUPERFAMILY SSF51905 107 327 1.12E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 293 2.0E-6 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 130 2.0E-6 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 230 238 2.0E-6 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 Gene3D G3DSA:3.50.50.60 413 584 1.7E-26 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 Gene3D G3DSA:3.50.50.60 91 345 5.1E-68 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05570 fcf640684142e3318c380978d4ea73c6 586 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 110 306 6.9E-20 T 23-10-2018 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 132 3.4E-15 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 2.7E-31 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 Gene3D G3DSA:2.40.110.10 136 251 9.8E-43 T 23-10-2018 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 Gene3D G3DSA:1.20.140.10 252 407 1.9E-34 T 23-10-2018 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 SUPERFAMILY SSF47203 250 405 2.26E-39 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 Gene3D G3DSA:1.10.540.10 1 135 4.1E-49 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 239 4.9E-19 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_09440 067fb4c9583f91623255c59e588f1050 412 SUPERFAMILY SSF56645 3 264 1.96E-61 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_03315 0085f46dd607ca4be0ac10cf06490dfb 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 6.9E-25 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_03315 0085f46dd607ca4be0ac10cf06490dfb 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.385 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_03315 0085f46dd607ca4be0ac10cf06490dfb 51 Pfam PF00471 Ribosomal protein L33 4 49 6.1E-18 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_03315 0085f46dd607ca4be0ac10cf06490dfb 51 Gene3D G3DSA:2.20.28.120 1 51 2.9E-28 T 23-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_03315 0085f46dd607ca4be0ac10cf06490dfb 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_03315 0085f46dd607ca4be0ac10cf06490dfb 51 SUPERFAMILY SSF57829 1 49 1.28E-18 T 23-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CDG60_08260 3092bda31cd64d7252eb1790524f6190 287 SUPERFAMILY SSF53474 4 270 2.16E-30 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_08260 3092bda31cd64d7252eb1790524f6190 287 PIRSF PIRSF037442 2 285 1.2E-66 T 23-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 CDG60_08260 3092bda31cd64d7252eb1790524f6190 287 Pfam PF12146 Serine aminopeptidase, S33 36 248 1.6E-10 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG60_08260 3092bda31cd64d7252eb1790524f6190 287 Gene3D G3DSA:3.40.50.1820 2 286 2.0E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 Gene3D G3DSA:3.30.1130.10 132 273 1.6E-53 T 23-10-2018 CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 PIRSF PIRSF004750 1 273 2.1E-107 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 Gene3D G3DSA:3.30.1130.10 14 130 6.0E-39 T 23-10-2018 CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 Pfam PF14489 QueF-like protein 186 257 6.2E-23 T 23-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 273 117.733 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 TIGRFAM TIGR03138 QueF: queuine synthase 4 273 5.3E-110 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 120 1.6E-38 T 23-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG60_12425 ec2ded785ff62e988e089bb6aef1ec92 273 SUPERFAMILY SSF55620 166 256 3.19E-12 T 23-10-2018 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 SUPERFAMILY SSF55174 3 88 2.8E-10 T 23-10-2018 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 SMART SM00363 1 59 7.3E-4 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 Pfam PF01479 S4 domain 3 41 7.2E-7 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 Pfam PF00849 RNA pseudouridylate synthase 62 193 5.3E-16 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 Gene3D G3DSA:3.10.290.10 2 59 2.8E-9 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 Gene3D G3DSA:3.30.70.580 62 227 4.3E-52 T 23-10-2018 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 Gene3D G3DSA:3.30.70.1560 129 210 4.3E-52 T 23-10-2018 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 5.9E-42 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG60_10460 26aa67aa98ee777010f86091a6c43d7f 240 SUPERFAMILY SSF55120 61 226 2.72E-37 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_00895 041cf999a5061c981bc06ff297ec2468 180 Gene3D G3DSA:3.40.50.360 1 180 8.9E-45 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_00895 041cf999a5061c981bc06ff297ec2468 180 SUPERFAMILY SSF52218 1 174 8.54E-36 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_00895 041cf999a5061c981bc06ff297ec2468 180 Pfam PF03358 NADPH-dependent FMN reductase 1 139 6.3E-32 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG60_13285 12c7ae0df9c06a58ba20dd11c6f1fcce 560 SUPERFAMILY SSF53649 41 554 1.45E-133 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_13285 12c7ae0df9c06a58ba20dd11c6f1fcce 560 Gene3D G3DSA:3.40.720.10 39 477 1.2E-129 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_13285 12c7ae0df9c06a58ba20dd11c6f1fcce 560 Gene3D G3DSA:3.30.1120.10 483 560 7.5E-16 T 23-10-2018 CDG60_13285 12c7ae0df9c06a58ba20dd11c6f1fcce 560 Pfam PF00884 Sulfatase 42 448 5.9E-78 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG60_13285 12c7ae0df9c06a58ba20dd11c6f1fcce 560 ProSitePatterns PS00149 Sulfatases signature 2. 142 152 - T 23-10-2018 IPR024607 Sulfatase, conserved site CDG60_15160 febec3ff5642018588d2a7c94f91d3a5 282 SUPERFAMILY SSF81901 57 221 2.07E-18 T 23-10-2018 CDG60_15160 febec3ff5642018588d2a7c94f91d3a5 282 Pfam PF13428 Tetratricopeptide repeat 55 94 1.2E-5 T 23-10-2018 CDG60_15160 febec3ff5642018588d2a7c94f91d3a5 282 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 28 262 1.1E-66 T 23-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CDG60_15160 febec3ff5642018588d2a7c94f91d3a5 282 SMART SM00028 53 86 0.07 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_15160 febec3ff5642018588d2a7c94f91d3a5 282 SMART SM00028 160 193 6.3E-5 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_15160 febec3ff5642018588d2a7c94f91d3a5 282 Pfam PF13424 Tetratricopeptide repeat 124 191 2.9E-7 T 23-10-2018 CDG60_15160 febec3ff5642018588d2a7c94f91d3a5 282 Gene3D G3DSA:1.25.40.10 50 273 4.2E-41 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 SUPERFAMILY SSF81624 2 136 1.03E-33 T 23-10-2018 IPR035937 MutM-like, N-terminal CDG60_14700 c200657a9471618e2359bd5762c011a9 284 Pfam PF06827 Zinc finger found in FPG and IleRS 239 267 4.5E-8 T 23-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 Gene3D G3DSA:3.20.190.10 2 126 7.9E-34 T 23-10-2018 IPR035937 MutM-like, N-terminal CDG60_14700 c200657a9471618e2359bd5762c011a9 284 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 3.1E-26 T 23-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 SUPERFAMILY SSF57716 215 267 2.02E-15 T 23-10-2018 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 216 1.0E-25 T 23-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 SMART SM01232 127 219 2.5E-41 T 23-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 SMART SM00898 2 113 1.3E-42 T 23-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 Gene3D G3DSA:1.10.8.50 129 267 6.9E-44 T 23-10-2018 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 266 4.4E-87 T 23-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 267 38.664 T 23-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CDG60_14700 c200657a9471618e2359bd5762c011a9 284 SUPERFAMILY SSF46946 128 220 7.46E-28 T 23-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CDG60_13195 e5b14084586f215058284670223bcde9 54 PRINTS PR00163 Rubredoxin signature 3 19 8.8E-11 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG60_13195 e5b14084586f215058284670223bcde9 54 PRINTS PR00163 Rubredoxin signature 33 49 8.8E-11 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG60_13195 e5b14084586f215058284670223bcde9 54 Pfam PF00301 Rubredoxin 3 49 5.6E-25 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG60_13195 e5b14084586f215058284670223bcde9 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CDG60_13195 e5b14084586f215058284670223bcde9 54 PIRSF PIRSF000071 1 54 2.8E-26 T 23-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 CDG60_13195 e5b14084586f215058284670223bcde9 54 Gene3D G3DSA:2.20.28.10 1 54 4.9E-29 T 23-10-2018 CDG60_13195 e5b14084586f215058284670223bcde9 54 SUPERFAMILY SSF57802 1 53 2.86E-23 T 23-10-2018 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Pfam PF03764 Elongation factor G, domain IV 486 606 2.3E-41 T 23-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Gene3D G3DSA:3.30.230.10 491 696 5.6E-87 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 SUPERFAMILY SSF54980 409 486 4.32E-25 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 SUPERFAMILY SSF52540 6 287 1.41E-105 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 4.3E-28 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 702 0.0 T 23-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Pfam PF00679 Elongation factor G C-terminus 609 695 3.1E-31 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 5.0E-65 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Gene3D G3DSA:3.40.50.300 1 299 7.0E-112 T 23-10-2018 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Gene3D G3DSA:2.40.30.10 300 412 1.6E-42 T 23-10-2018 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Gene3D G3DSA:3.30.70.870 413 487 9.7E-33 T 23-10-2018 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Pfam PF14492 Elongation Factor G, domain II 411 485 2.1E-34 T 23-10-2018 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 SUPERFAMILY SSF54980 612 700 1.58E-29 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 SMART SM00889 487 607 4.1E-63 T 23-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 SUPERFAMILY SSF50447 271 411 1.92E-33 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Pfam PF03144 Elongation factor Tu domain 2 331 398 6.5E-14 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 SMART SM00838 609 697 5.8E-56 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Hamap MF_00054_B Elongation factor G [fusA]. 6 701 111.178 T 23-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 Gene3D G3DSA:3.30.70.240 613 684 5.6E-87 T 23-10-2018 CDG60_04545 1b0c5a3ea06466ab1c0adcabc969039b 711 SUPERFAMILY SSF54211 490 608 2.43E-41 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 PIRSF PIRSF002097 1 87 5.6E-35 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 Pfam PF02954 Bacterial regulatory protein, Fis family 44 83 3.2E-15 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 50 67 1.3E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 67 87 1.3E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 46 58 2.0E-9 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 31 46 2.0E-9 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 15 31 2.0E-9 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 Gene3D G3DSA:1.10.10.60 2 86 7.0E-27 T 23-10-2018 CDG60_11205 9beb2be0ff7814b76031033622824e1f 89 SUPERFAMILY SSF46689 15 86 6.27E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 158.167 T 23-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 5.8E-41 T 23-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 SUPERFAMILY SSF52440 1 121 4.32E-41 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 Gene3D G3DSA:3.30.470.20 114 294 1.3E-109 T 23-10-2018 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 295 1.8E-75 T 23-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 Gene3D G3DSA:3.30.1490.20 136 200 1.3E-109 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 4.9E-129 T 23-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 Gene3D G3DSA:3.40.50.20 6 113 1.3E-109 T 23-10-2018 CDG60_17400 f9945f3bbc100f47179fb1cd0256602d 314 SUPERFAMILY SSF56059 122 309 5.82E-56 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 Gene3D G3DSA:3.50.50.60 111 248 3.7E-82 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 SUPERFAMILY SSF51905 2 309 2.79E-38 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.5E-21 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.5E-21 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.5E-21 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.5E-21 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.5E-21 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 Gene3D G3DSA:3.50.50.60 5 284 3.7E-82 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 Gene3D G3DSA:3.30.390.120 320 384 3.9E-13 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-16 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 2.2E-16 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 2.2E-16 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.2E-16 T 23-10-2018 CDG60_13200 a54623b46bc7d40b7f740d464bc25dad 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 2.7E-56 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_07860 2d435995d1d1d6f5a4eccba87d371439 504 SUPERFAMILY SSF52151 157 489 1.18E-43 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG60_07860 2d435995d1d1d6f5a4eccba87d371439 504 Pfam PF01734 Patatin-like phospholipase 159 340 1.0E-22 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDG60_07860 2d435995d1d1d6f5a4eccba87d371439 504 Gene3D G3DSA:3.40.1090.10 244 401 2.8E-13 T 23-10-2018 CDG60_07860 2d435995d1d1d6f5a4eccba87d371439 504 Gene3D G3DSA:3.40.1090.20 156 226 5.9E-7 T 23-10-2018 CDG60_07860 2d435995d1d1d6f5a4eccba87d371439 504 Pfam PF11815 Domain of unknown function (DUF3336) 16 150 2.8E-37 T 23-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 2.1E-42 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Pfam PF08335 GlnD PII-uridylyltransferase 785 880 7.6E-10 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Gene3D G3DSA:3.30.460.10 88 257 1.6E-50 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 SUPERFAMILY SSF81301 481 773 2.16E-77 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Gene3D G3DSA:1.10.4050.10 1 86 3.9E-5 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Gene3D G3DSA:3.30.460.100 518 769 3.8E-75 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 SUPERFAMILY SSF81301 4 259 9.15E-65 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 SUPERFAMILY SSF81593 775 905 1.49E-30 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 SUPERFAMILY SSF81593 260 409 3.22E-41 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 1 907 18.244 T 23-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 509 762 4.6E-70 T 23-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 4 241 1.4E-62 T 23-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Gene3D G3DSA:1.20.120.1510 409 517 3.6E-16 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Gene3D G3DSA:1.20.120.330 258 408 6.4E-51 T 23-10-2018 CDG60_03755 3723802bf9c9655699349022a513e3c4 914 Gene3D G3DSA:1.20.120.330 770 907 9.0E-44 T 23-10-2018 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Gene3D G3DSA:3.40.50.880 966 1278 5.1E-133 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SMART SM01211 1023 1277 7.3E-150 T 23-10-2018 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SUPERFAMILY SSF55326 624 811 8.11E-65 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Gene3D G3DSA:3.30.1330.10 610 799 6.1E-26 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Pfam PF02769 AIR synthase related protein, C-terminal domain 425 582 4.5E-29 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Pfam PF02769 AIR synthase related protein, C-terminal domain 863 955 1.3E-7 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1276 0.0 T 23-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SUPERFAMILY SSF52317 1022 1277 1.53E-93 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1278 20.323 T 23-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SUPERFAMILY SSF55326 215 421 6.28E-59 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Gene3D G3DSA:3.90.650.10 800 965 4.6E-21 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Gene3D G3DSA:3.90.650.10 416 600 3.2E-59 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SUPERFAMILY SSF56042 812 1018 1.14E-43 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SUPERFAMILY SSF82697 1 145 1.73E-32 T 23-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SUPERFAMILY SSF109736 149 214 1.03E-20 T 23-10-2018 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1023 1277 2.9E-105 T 23-10-2018 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Gene3D G3DSA:1.10.8.750 147 207 1.5E-27 T 23-10-2018 CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 SUPERFAMILY SSF56042 422 650 2.09E-51 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_06740 395241a5d7406a0890ab9c94aa36105d 1278 Gene3D G3DSA:3.30.1330.10 208 415 1.7E-41 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_12590 5689688fd864d54e79e80b8a78eabf16 332 Pfam PF06996 Type VI secretion, TssG 20 311 4.8E-65 T 23-10-2018 IPR010732 Type VI secretion, TssG-like CDG60_12590 5689688fd864d54e79e80b8a78eabf16 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 305 5.2E-64 T 23-10-2018 IPR010732 Type VI secretion, TssG-like CDG60_08870 30cbf5b3734053dc487f2826a889c55f 450 SUPERFAMILY SSF55073 292 446 1.1E-45 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_08870 30cbf5b3734053dc487f2826a889c55f 450 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 286 446 5.2E-50 T 23-10-2018 IPR000160 GGDEF domain CDG60_08870 30cbf5b3734053dc487f2826a889c55f 450 SMART SM00267 276 447 1.7E-57 T 23-10-2018 IPR000160 GGDEF domain CDG60_08870 30cbf5b3734053dc487f2826a889c55f 450 Gene3D G3DSA:3.30.70.270 285 450 2.4E-56 T 23-10-2018 CDG60_08870 30cbf5b3734053dc487f2826a889c55f 450 Pfam PF00990 Diguanylate cyclase, GGDEF domain 287 443 2.0E-47 T 23-10-2018 IPR000160 GGDEF domain CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 SUPERFAMILY SSF56731 179 470 1.31E-92 T 23-10-2018 CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Pfam PF01807 CHC2 zinc finger 4 98 6.3E-38 T 23-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Gene3D G3DSA:3.90.980.10 178 299 3.3E-36 T 23-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Gene3D G3DSA:3.90.580.10 1 101 9.7E-37 T 23-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Hamap MF_00974 DNA primase [dnaG]. 2 628 26.434 T 23-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Pfam PF13662 Toprim domain 321 384 1.3E-15 T 23-10-2018 IPR006171 TOPRIM domain CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Pfam PF10410 DnaB-helicase binding domain of primase 426 478 3.3E-4 T 23-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 SMART SM00400 34 88 4.8E-29 T 23-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Gene3D G3DSA:3.40.1360.10 300 423 2.4E-37 T 23-10-2018 CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 SMART SM00493 317 387 3.7E-15 T 23-10-2018 IPR006171 TOPRIM domain CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 Pfam PF08275 DNA primase catalytic core, N-terminal domain 189 309 1.2E-36 T 23-10-2018 IPR013264 DNA primase, catalytic core, N-terminal CDG60_05460 4b87eca2842fd959d5ab0cae660ba653 636 SUPERFAMILY SSF57783 1 97 3.06E-33 T 23-10-2018 CDG60_09420 50c2f4d4b56b5f0f7ee53753eaf371d3 123 SUPERFAMILY SSF47413 14 51 9.12E-6 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_09420 50c2f4d4b56b5f0f7ee53753eaf371d3 123 Pfam PF09722 Protein of unknown function (DUF2384) 73 121 6.3E-8 T 23-10-2018 IPR024467 Domain of unknown function DUF2384 CDG60_10925 2224c13de79f07501d99c93b15605d88 302 Gene3D G3DSA:2.160.10.10 190 301 2.4E-31 T 23-10-2018 CDG60_10925 2224c13de79f07501d99c93b15605d88 302 PIRSF PIRSF000441 122 300 1.5E-56 T 23-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CDG60_10925 2224c13de79f07501d99c93b15605d88 302 SUPERFAMILY SSF51161 105 292 3.8E-48 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_10925 2224c13de79f07501d99c93b15605d88 302 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 249 283 3.1E-6 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_10925 2224c13de79f07501d99c93b15605d88 302 Gene3D G3DSA:1.10.3130.10 33 189 1.1E-50 T 23-10-2018 CDG60_15070 0e0d780e79e5a2d361989587878cb2e6 348 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 37 214 6.5E-33 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_15070 0e0d780e79e5a2d361989587878cb2e6 348 Pfam PF12833 Helix-turn-helix domain 267 342 5.6E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_15070 0e0d780e79e5a2d361989587878cb2e6 348 Gene3D G3DSA:1.10.10.60 238 345 1.9E-19 T 23-10-2018 CDG60_15070 0e0d780e79e5a2d361989587878cb2e6 348 SMART SM00342 260 341 6.1E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_15070 0e0d780e79e5a2d361989587878cb2e6 348 SUPERFAMILY SSF46689 299 342 2.82E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17505 2659ca6055fcea4b6d162a9356b2c4a8 165 Pfam PF02600 Disulfide bond formation protein DsbB 6 157 2.8E-40 T 23-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CDG60_17505 2659ca6055fcea4b6d162a9356b2c4a8 165 Gene3D G3DSA:1.20.1550.10 2 164 7.1E-50 T 23-10-2018 IPR023380 DsbB-like superfamily CDG60_17505 2659ca6055fcea4b6d162a9356b2c4a8 165 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 165 22.909 T 23-10-2018 IPR022920 Disulphide bond formation protein DsbB CDG60_17505 2659ca6055fcea4b6d162a9356b2c4a8 165 SUPERFAMILY SSF158442 11 159 5.75E-41 T 23-10-2018 IPR023380 DsbB-like superfamily CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Gene3D G3DSA:3.30.1490.110 83 170 1.7E-84 T 23-10-2018 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 SUPERFAMILY SSF53067 8 198 2.68E-37 T 23-10-2018 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Gene3D G3DSA:3.30.420.40 11 375 1.7E-84 T 23-10-2018 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 PIRSF PIRSF003101 1 420 1.1E-103 T 23-10-2018 IPR020823 Cell division protein FtsA CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Gene3D G3DSA:3.90.640.10 236 299 1.7E-84 T 23-10-2018 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 3.3E-8 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 420 22.742 T 23-10-2018 IPR020823 Cell division protein FtsA CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Gene3D G3DSA:3.30.420.40 198 351 1.7E-84 T 23-10-2018 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 SUPERFAMILY SSF53067 199 380 7.56E-36 T 23-10-2018 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 SMART SM00842 8 197 1.1E-62 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Pfam PF14450 Cell division protein FtsA 208 377 1.2E-19 T 23-10-2018 CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 380 7.3E-93 T 23-10-2018 IPR020823 Cell division protein FtsA CDG60_17375 eccb509ea7e4fddd88b406d66c75574c 420 Pfam PF14450 Cell division protein FtsA 9 179 1.0E-9 T 23-10-2018 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Pfam PF02926 THUMP domain 33 154 2.3E-10 T 23-10-2018 IPR004114 THUMP domain GO:0003723 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Gene3D G3DSA:3.40.50.150 182 387 8.9E-111 T 23-10-2018 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 SUPERFAMILY SSF53335 162 366 1.39E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 PIRSF PIRSF037618 6 733 1.1E-282 T 23-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Gene3D G3DSA:3.40.50.150 512 731 9.9E-69 T 23-10-2018 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Gene3D G3DSA:3.30.750.80 420 511 5.6E-33 T 23-10-2018 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 SUPERFAMILY SSF53335 423 731 1.05E-61 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 323 329 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 210 221 - T 23-10-2018 IPR000241 Putative RNA methylase domain CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 10 732 29.338 T 23-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 SMART SM00981 70 167 4.6E-7 T 23-10-2018 IPR004114 THUMP domain GO:0003723 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Gene3D G3DSA:3.30.2130.30 12 269 8.9E-111 T 23-10-2018 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 320 332 3.3E-5 T 23-10-2018 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 3.3E-5 T 23-10-2018 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 505 686 3.8E-21 T 23-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CDG60_10905 7452e63272caef7f5e796afdb5057ccf 734 Pfam PF01170 Putative RNA methylase family UPF0020 175 369 1.7E-35 T 23-10-2018 IPR000241 Putative RNA methylase domain CDG60_04880 f510e32638ed29aab7f133a8befa55b5 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 729 1.9E-90 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG60_04880 f510e32638ed29aab7f133a8befa55b5 729 Gene3D G3DSA:2.170.130.10 56 181 6.4E-16 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_04880 f510e32638ed29aab7f133a8befa55b5 729 Pfam PF00593 TonB dependent receptor 288 727 7.7E-38 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_04880 f510e32638ed29aab7f133a8befa55b5 729 Gene3D G3DSA:2.40.170.20 182 729 3.9E-82 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_04880 f510e32638ed29aab7f133a8befa55b5 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 159 1.3E-12 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_04880 f510e32638ed29aab7f133a8befa55b5 729 SUPERFAMILY SSF56935 61 729 3.95E-102 T 23-10-2018 CDG60_06250 3d80cd7444ad67c5b1216c1f709af018 413 Gene3D G3DSA:3.30.70.270 239 411 2.6E-50 T 23-10-2018 CDG60_06250 3d80cd7444ad67c5b1216c1f709af018 413 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 407 7.9E-45 T 23-10-2018 IPR000160 GGDEF domain CDG60_06250 3d80cd7444ad67c5b1216c1f709af018 413 SUPERFAMILY SSF55073 252 409 2.35E-45 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_06250 3d80cd7444ad67c5b1216c1f709af018 413 SMART SM00267 236 411 2.5E-54 T 23-10-2018 IPR000160 GGDEF domain CDG60_06250 3d80cd7444ad67c5b1216c1f709af018 413 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 410 3.6E-44 T 23-10-2018 IPR000160 GGDEF domain CDG60_12680 655b4999e1cf17ce1a9ac2a6340b8f41 160 Gene3D G3DSA:3.40.1280.10 1 158 5.0E-52 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_12680 655b4999e1cf17ce1a9ac2a6340b8f41 160 Pfam PF02590 Predicted SPOUT methyltransferase 1 157 1.4E-50 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG60_12680 655b4999e1cf17ce1a9ac2a6340b8f41 160 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 158 4.0E-52 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG60_12680 655b4999e1cf17ce1a9ac2a6340b8f41 160 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 158 28.167 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG60_12680 655b4999e1cf17ce1a9ac2a6340b8f41 160 SUPERFAMILY SSF75217 1 156 2.72E-50 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_12680 655b4999e1cf17ce1a9ac2a6340b8f41 160 PIRSF PIRSF004505 1 158 8.4E-50 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG60_16505 38135bbc600244fa04568166daf56f86 142 Pfam PF12019 Type II transport protein GspH 33 132 4.0E-9 T 23-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CDG60_16505 38135bbc600244fa04568166daf56f86 142 Gene3D G3DSA:3.30.700.10 1 140 4.3E-8 T 23-10-2018 CDG60_16505 38135bbc600244fa04568166daf56f86 142 SUPERFAMILY SSF54523 1 114 5.73E-10 T 23-10-2018 CDG60_14135 f8dd635176a2a05ef78df6a182b8500b 325 Gene3D G3DSA:3.60.15.10 40 325 9.2E-53 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_14135 f8dd635176a2a05ef78df6a182b8500b 325 Pfam PF12706 Beta-lactamase superfamily domain 103 292 2.0E-15 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_14135 f8dd635176a2a05ef78df6a182b8500b 325 SMART SM00849 56 270 2.3E-6 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_14135 f8dd635176a2a05ef78df6a182b8500b 325 SUPERFAMILY SSF56281 40 325 5.46E-44 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 Gene3D G3DSA:3.40.50.720 1 279 7.6E-68 T 23-10-2018 CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 SUPERFAMILY SSF51735 1 268 2.67E-62 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.6E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.6E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.6E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.6E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 Pfam PF00106 short chain dehydrogenase 7 199 1.3E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.8E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.8E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17575 eeebaf3c5cc9e2446464be0d1eb8ab0b 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.8E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_17835 f1848f8503d88dffc0fdfdc1f2df4a8c 271 Gene3D G3DSA:3.30.1330.60 151 271 9.1E-26 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_17835 f1848f8503d88dffc0fdfdc1f2df4a8c 271 Gene3D G3DSA:3.30.1450.10 51 130 4.2E-7 T 23-10-2018 IPR037873 BamE-like CDG60_17835 f1848f8503d88dffc0fdfdc1f2df4a8c 271 SUPERFAMILY SSF103088 157 270 1.83E-20 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_17835 f1848f8503d88dffc0fdfdc1f2df4a8c 271 Pfam PF04355 SmpA / OmlA family 54 120 4.9E-14 T 23-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CDG60_17835 f1848f8503d88dffc0fdfdc1f2df4a8c 271 PRINTS PR01021 OMPA domain signature 209 225 2.0E-6 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_17835 f1848f8503d88dffc0fdfdc1f2df4a8c 271 PRINTS PR01021 OMPA domain signature 194 209 2.0E-6 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_17835 f1848f8503d88dffc0fdfdc1f2df4a8c 271 Pfam PF00691 OmpA family 178 256 2.0E-15 T 23-10-2018 IPR006665 OmpA-like domain CDG60_08865 ee75ef16939903c646e50323433499a1 496 SUPERFAMILY SSF75304 2 484 1.7E-115 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_08865 ee75ef16939903c646e50323433499a1 496 Pfam PF01425 Amidase 27 475 9.2E-76 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_08865 ee75ef16939903c646e50323433499a1 496 Gene3D G3DSA:3.90.1300.10 4 495 8.9E-147 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_08865 ee75ef16939903c646e50323433499a1 496 ProSitePatterns PS00571 Amidases signature. 150 181 - T 23-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 SUPERFAMILY SSF46689 5 72 6.14E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 Gene3D G3DSA:1.10.357.10 3 186 1.2E-37 T 23-10-2018 CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 Pfam PF16925 Bacterial transcriptional repressor C-terminal 100 183 4.0E-8 T 23-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 SUPERFAMILY SSF48498 98 184 6.92E-15 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13370 d45d97e76894990d8b54924fe1f9c08b 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 57 1.5E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 Gene3D G3DSA:3.40.50.300 1486 1700 6.1E-44 T 23-10-2018 CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 SUPERFAMILY SSF56112 310 427 1.57E-8 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 Pfam PF13087 AAA domain 1463 1672 3.9E-40 T 23-10-2018 CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 Pfam PF13086 AAA domain 1115 1432 2.7E-35 T 23-10-2018 CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 SUPERFAMILY SSF52540 1113 1678 1.96E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 Pfam PF08378 Nuclease-related domain 27 130 6.8E-9 T 23-10-2018 IPR011528 Nuclease-related domain, NERD CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 Gene3D G3DSA:1.10.510.10 529 708 4.8E-12 T 23-10-2018 CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 Pfam PF00069 Protein kinase domain 541 663 3.6E-9 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 SUPERFAMILY SSF56112 539 660 1.62E-15 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 Gene3D G3DSA:1.10.510.10 307 474 4.1E-9 T 23-10-2018 CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 SMART SM00382 1129 1456 0.0011 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_09140 db06196daf14d7c40f6f32078973cde0 1713 SMART SM00220 506 876 0.0035 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDG60_16545 005af7f89fe2913931020b2f5eb543e8 208 Gene3D G3DSA:3.30.63.10 34 93 2.5E-66 T 23-10-2018 CDG60_16545 005af7f89fe2913931020b2f5eb543e8 208 Pfam PF00625 Guanylate kinase 6 182 4.9E-51 T 23-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDG60_16545 005af7f89fe2913931020b2f5eb543e8 208 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 2.7E-73 T 23-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CDG60_16545 005af7f89fe2913931020b2f5eb543e8 208 SMART SM00072 2 184 8.8E-66 T 23-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDG60_16545 005af7f89fe2913931020b2f5eb543e8 208 Gene3D G3DSA:3.40.50.300 7 180 2.5E-66 T 23-10-2018 CDG60_16545 005af7f89fe2913931020b2f5eb543e8 208 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.364 T 23-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CDG60_16545 005af7f89fe2913931020b2f5eb543e8 208 SUPERFAMILY SSF52540 2 185 2.52E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_13215 063488c5dce5cab866bdea774484012e 193 SUPERFAMILY SSF52172 30 125 2.49E-6 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_13215 063488c5dce5cab866bdea774484012e 193 SUPERFAMILY SSF46894 131 181 2.01E-6 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_13215 063488c5dce5cab866bdea774484012e 193 Gene3D G3DSA:3.40.50.12740 10 188 4.9E-19 T 23-10-2018 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 9.7E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 9.7E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 Gene3D G3DSA:1.10.10.60 184 234 2.1E-15 T 23-10-2018 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 Pfam PF12833 Helix-turn-helix domain 207 285 4.5E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 Gene3D G3DSA:1.10.10.60 235 287 5.7E-17 T 23-10-2018 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 SUPERFAMILY SSF46689 186 235 2.54E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 SMART SM00342 201 284 4.3E-34 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_01460 4eb2103507253a3d284cbc4c658e77d5 287 SUPERFAMILY SSF46689 237 286 2.24E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_04335 906ed32a8ab0cd65abcdb14bad1d8032 328 Gene3D G3DSA:3.30.360.10 133 272 1.1E-125 T 23-10-2018 CDG60_04335 906ed32a8ab0cd65abcdb14bad1d8032 328 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 124 277 3.1E-77 T 23-10-2018 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 CDG60_04335 906ed32a8ab0cd65abcdb14bad1d8032 328 SUPERFAMILY SSF55347 125 276 1.37E-60 T 23-10-2018 CDG60_04335 906ed32a8ab0cd65abcdb14bad1d8032 328 Gene3D G3DSA:3.40.50.720 5 312 1.1E-125 T 23-10-2018 CDG60_04335 906ed32a8ab0cd65abcdb14bad1d8032 328 TIGRFAM TIGR01921 DAP-DH: diaminopimelate dehydrogenase 4 328 6.4E-140 T 23-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 CDG60_04335 906ed32a8ab0cd65abcdb14bad1d8032 328 SUPERFAMILY SSF51735 4 150 3.1E-26 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_04335 906ed32a8ab0cd65abcdb14bad1d8032 328 PIRSF PIRSF025648 2 328 1.2E-138 T 23-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 CDG60_17890 576933d808fd0e14352b249b6d3e3690 258 Gene3D G3DSA:2.60.120.620 18 258 3.8E-12 T 23-10-2018 CDG60_17890 576933d808fd0e14352b249b6d3e3690 258 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 41 249 7.2E-7 T 23-10-2018 IPR008775 Phytanoyl-CoA dioxygenase CDG60_17890 576933d808fd0e14352b249b6d3e3690 258 SUPERFAMILY SSF51197 34 255 6.41E-19 T 23-10-2018 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SMART SM00490 828 912 4.1E-19 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SUPERFAMILY SSF52540 12 344 2.12E-81 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Gene3D G3DSA:2.30.30.840 485 543 2.2E-227 T 23-10-2018 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Pfam PF00270 DEAD/DEAH box helicase 609 766 5.4E-20 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1108 26.863 T 23-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1084 0.0 T 23-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SMART SM01058 481 578 2.5E-44 T 23-10-2018 IPR003711 CarD-like/TRCF domain CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Pfam PF00271 Helicase conserved C-terminal domain 807 911 8.6E-19 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Gene3D G3DSA:3.40.50.11140 360 455 1.7E-9 T 23-10-2018 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Gene3D G3DSA:3.40.50.300 544 783 2.2E-227 T 23-10-2018 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SUPERFAMILY SSF52540 354 467 1.33E-21 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SUPERFAMILY SSF143517 997 1148 1.96E-41 T 23-10-2018 IPR037235 TRCF-like, C-terminal domain CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Gene3D G3DSA:3.30.2060.10 128 213 4.7E-98 T 23-10-2018 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SUPERFAMILY SSF52540 653 922 1.5E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Gene3D G3DSA:3.40.50.300 480 991 2.2E-227 T 23-10-2018 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Pfam PF02559 CarD-like/TRCF domain 482 575 3.9E-21 T 23-10-2018 IPR003711 CarD-like/TRCF domain CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SMART SM00982 1010 1110 9.1E-45 T 23-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Gene3D G3DSA:3.40.50.11180 27 338 4.7E-98 T 23-10-2018 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SUPERFAMILY SSF141259 473 550 1.7E-21 T 23-10-2018 IPR036101 CarD-like/TRCF domain superfamily CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Gene3D G3DSA:3.90.1150.50 1006 1151 1.8E-42 T 23-10-2018 IPR037235 TRCF-like, C-terminal domain CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 Pfam PF03461 TRCF domain 1011 1101 4.0E-27 T 23-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CDG60_10110 9cd378a168aa0204efdfa60bcc489f40 1155 SMART SM00487 602 792 5.9E-30 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_07700 b96862d847e95781533de2bf2257dc1a 238 SUPERFAMILY SSF53335 43 232 1.22E-26 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_07700 b96862d847e95781533de2bf2257dc1a 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 237 2.8E-51 T 23-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CDG60_07700 b96862d847e95781533de2bf2257dc1a 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 237 29.188 T 23-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CDG60_07700 b96862d847e95781533de2bf2257dc1a 238 Pfam PF02390 Putative methyltransferase 64 230 1.6E-49 T 23-10-2018 CDG60_07700 b96862d847e95781533de2bf2257dc1a 238 Gene3D G3DSA:3.40.50.150 34 238 4.0E-58 T 23-10-2018 CDG60_17095 e88c8052696df8ee0d5e04e260aea0b9 187 Pfam PF00578 AhpC/TSA family 7 132 2.5E-34 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_17095 e88c8052696df8ee0d5e04e260aea0b9 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 2.4E-6 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_17095 e88c8052696df8ee0d5e04e260aea0b9 187 PIRSF PIRSF000239 1 187 4.2E-54 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_17095 e88c8052696df8ee0d5e04e260aea0b9 187 Gene3D G3DSA:3.40.30.10 1 186 2.2E-63 T 23-10-2018 CDG60_17095 e88c8052696df8ee0d5e04e260aea0b9 187 SUPERFAMILY SSF52833 1 186 1.45E-57 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_17095 e88c8052696df8ee0d5e04e260aea0b9 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 3.1E-104 T 23-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG60_12910 1fd74012d057ff2cc4520b94e6bc7ef0 292 Gene3D G3DSA:1.10.357.140 27 188 1.5E-38 T 23-10-2018 CDG60_12910 1fd74012d057ff2cc4520b94e6bc7ef0 292 Pfam PF01040 UbiA prenyltransferase family 31 273 4.6E-58 T 23-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CDG60_12910 1fd74012d057ff2cc4520b94e6bc7ef0 292 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 8 292 27.886 T 23-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CDG60_12910 1fd74012d057ff2cc4520b94e6bc7ef0 292 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 291 1.1E-93 T 23-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CDG60_18080 a885990302db33f5c21a26a782385973 233 SUPERFAMILY SSF54423 30 81 1.67E-11 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG60_18080 a885990302db33f5c21a26a782385973 233 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 2.2E-12 T 23-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDG60_18080 a885990302db33f5c21a26a782385973 233 Pfam PF13098 Thioredoxin-like domain 108 227 5.2E-27 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG60_18080 a885990302db33f5c21a26a782385973 233 Gene3D G3DSA:3.10.450.70 18 83 1.9E-7 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG60_18080 a885990302db33f5c21a26a782385973 233 SUPERFAMILY SSF52833 87 228 4.55E-29 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_18080 a885990302db33f5c21a26a782385973 233 Gene3D G3DSA:3.40.30.10 99 231 4.4E-35 T 23-10-2018 CDG60_18080 a885990302db33f5c21a26a782385973 233 ProSitePatterns PS00194 Thioredoxin family active site. 115 133 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG60_15965 8e1a9d47975797c27b9aa37654eab267 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15965 8e1a9d47975797c27b9aa37654eab267 109 Pfam PF00237 Ribosomal protein L22p/L17e 10 107 9.6E-36 T 23-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CDG60_15965 8e1a9d47975797c27b9aa37654eab267 109 Gene3D G3DSA:3.90.470.10 1 109 1.9E-44 T 23-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15965 8e1a9d47975797c27b9aa37654eab267 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.84 T 23-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15965 8e1a9d47975797c27b9aa37654eab267 109 SUPERFAMILY SSF54843 1 107 5.76E-41 T 23-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15965 8e1a9d47975797c27b9aa37654eab267 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 10 107 1.5E-45 T 23-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 SUPERFAMILY SSF47384 305 372 1.96E-10 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 SMART SM00388 312 376 1.3E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 Gene3D G3DSA:3.30.450.20 181 239 1.6E-5 T 23-10-2018 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 Pfam PF00512 His Kinase A (phospho-acceptor) domain 312 373 1.8E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 518 7.8E-16 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 Gene3D G3DSA:1.10.287.130 299 375 4.5E-14 T 23-10-2018 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 SMART SM00387 415 521 3.2E-24 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 1.1E-8 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 1.1E-8 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 1.1E-8 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 1.1E-8 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 Gene3D G3DSA:3.30.565.10 381 520 2.5E-29 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_02015 6fcaa002c86f4d68d73a348bb55a796d 523 SUPERFAMILY SSF55874 397 518 3.41E-27 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_00885 55db3b845a429d562a8b3e2f284f9c02 103 SUPERFAMILY SSF48403 22 100 1.87E-18 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG60_00885 55db3b845a429d562a8b3e2f284f9c02 103 SMART SM00248 49 78 6.0E-6 T 23-10-2018 IPR002110 Ankyrin repeat GO:0005515 CDG60_00885 55db3b845a429d562a8b3e2f284f9c02 103 Pfam PF12796 Ankyrin repeats (3 copies) 32 100 8.3E-13 T 23-10-2018 IPR020683 Ankyrin repeat-containing domain CDG60_00885 55db3b845a429d562a8b3e2f284f9c02 103 Gene3D G3DSA:1.25.40.20 10 103 4.7E-21 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG60_13280 3361910404513778327d1817009645e6 205 Gene3D G3DSA:1.20.1540.10 4 193 1.1E-27 T 23-10-2018 IPR035952 Rhomboid-like superfamily CDG60_13280 3361910404513778327d1817009645e6 205 Pfam PF01694 Rhomboid family 41 190 3.8E-25 T 23-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CDG60_13280 3361910404513778327d1817009645e6 205 SUPERFAMILY SSF144091 8 190 3.53E-35 T 23-10-2018 CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 Gene3D G3DSA:2.60.120.10 2 147 8.1E-27 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 1.8E-16 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 SMART SM00100 15 136 9.5E-6 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 SMART SM00419 171 219 0.002 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 SUPERFAMILY SSF46785 151 228 8.65E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 Gene3D G3DSA:1.10.10.10 150 232 1.5E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 Pfam PF13545 Crp-like helix-turn-helix domain 153 225 4.6E-14 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG60_10740 c234ee289a0f396a12131dbdc2b7ab52 234 SUPERFAMILY SSF51206 9 140 8.12E-32 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like CDG60_08305 72079d1c0b96696afa8304d4f4853b76 720 Hamap MF_00641 Malate synthase G [glcB]. 1 720 370.075 T 23-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG60_08305 72079d1c0b96696afa8304d4f4853b76 720 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 715 0.0 T 23-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG60_08305 72079d1c0b96696afa8304d4f4853b76 720 Gene3D G3DSA:3.20.20.360 10 578 5.1E-257 T 23-10-2018 CDG60_08305 72079d1c0b96696afa8304d4f4853b76 720 Pfam PF01274 Malate synthase 17 684 7.2E-158 T 23-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG60_08305 72079d1c0b96696afa8304d4f4853b76 720 Gene3D G3DSA:2.170.170.11 132 261 5.1E-257 T 23-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG60_08305 72079d1c0b96696afa8304d4f4853b76 720 Gene3D G3DSA:1.20.1220.12 579 720 1.7E-67 T 23-10-2018 CDG60_08305 72079d1c0b96696afa8304d4f4853b76 720 SUPERFAMILY SSF51645 3 716 1.16E-285 T 23-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 SUPERFAMILY SSF53150 119 277 4.97E-38 T 23-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Pfam PF00488 MutS domain V 623 809 9.4E-80 T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 701 717 - T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Gene3D G3DSA:3.30.420.110 134 273 2.5E-36 T 23-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 13 866 23.891 T 23-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Pfam PF05190 MutS family domain IV 441 531 6.2E-31 T 23-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 SUPERFAMILY SSF52540 580 810 3.77E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 SMART SM00533 293 604 3.0E-96 T 23-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Pfam PF05192 MutS domain III 281 572 5.3E-34 T 23-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 SUPERFAMILY SSF48334 278 578 1.7E-82 T 23-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 SUPERFAMILY SSF55271 8 120 1.7E-38 T 23-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Gene3D G3DSA:1.10.1420.10 277 572 4.2E-96 T 23-10-2018 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 PIRSF PIRSF037677 7 844 5.3E-147 T 23-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Gene3D G3DSA:3.40.50.300 581 875 7.8E-98 T 23-10-2018 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Gene3D G3DSA:1.10.1420.10 400 516 4.2E-96 T 23-10-2018 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Pfam PF05188 MutS domain II 135 264 9.2E-22 T 23-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Pfam PF01624 MutS domain I 14 124 5.3E-39 T 23-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 SMART SM00534 620 806 1.4E-112 T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 13 871 0.0 T 23-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CDG60_11350 76763d5547d79b55309a6c9259ee63fd 876 Gene3D G3DSA:3.40.1170.10 5 126 7.3E-48 T 23-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CDG60_14535 93268d60f2c9d811126218ed28fc5e76 349 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 37 193 3.0E-38 T 23-10-2018 IPR017482 Putative phage-type endonuclease CDG60_14535 93268d60f2c9d811126218ed28fc5e76 349 Gene3D G3DSA:3.90.320.10 39 247 8.3E-39 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDG60_14535 93268d60f2c9d811126218ed28fc5e76 349 SUPERFAMILY SSF52980 41 225 2.14E-33 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_14535 93268d60f2c9d811126218ed28fc5e76 349 Pfam PF09588 YqaJ-like viral recombinase domain 42 183 2.8E-36 T 23-10-2018 IPR019080 YqaJ viral recombinase CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 Gene3D G3DSA:1.10.8.60 182 255 2.4E-31 T 23-10-2018 CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 2.0E-29 T 23-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 Gene3D G3DSA:1.10.10.10 257 333 7.4E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 175.53 T 23-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 SUPERFAMILY SSF52540 20 252 1.76E-53 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 Gene3D G3DSA:3.40.50.300 18 181 1.7E-37 T 23-10-2018 CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 328 5.0E-28 T 23-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 5.2E-142 T 23-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 SUPERFAMILY SSF46785 257 330 8.71E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 SMART SM00382 51 178 9.9E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_06705 751c00cc68ed8d66d2ad8fecf190da92 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 235 3.5E-115 T 23-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CDG60_12315 984ea390c85b68e0a5247de683d9a6e1 152 Pfam PF03592 Terminase small subunit 3 86 1.9E-5 T 23-10-2018 IPR005335 Terminase small subunit GO:0006323 CDG60_12315 984ea390c85b68e0a5247de683d9a6e1 152 Gene3D G3DSA:1.10.10.1400 1 61 1.1E-7 T 23-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 7.3E-74 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 8.9E-82 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 Gene3D G3DSA:3.90.870.10 1 206 1.7E-85 T 23-10-2018 CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 SUPERFAMILY SSF55821 2 202 1.01E-84 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 SUPERFAMILY SSF142695 205 366 1.96E-33 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.298 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 Pfam PF00925 GTP cyclohydrolase II 209 365 1.5E-27 T 23-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG60_01365 1e36e68463cc30fb1b540e4b6f9664dc 373 PIRSF PIRSF001259 2 373 1.6E-112 T 23-10-2018 CDG60_11670 a66a7ec808f76a62e5f530ec5cc99574 431 Gene3D G3DSA:3.40.640.10 72 320 1.5E-176 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_11670 a66a7ec808f76a62e5f530ec5cc99574 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_11670 a66a7ec808f76a62e5f530ec5cc99574 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 428 3.8E-188 T 23-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CDG60_11670 a66a7ec808f76a62e5f530ec5cc99574 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 429 104.075 T 23-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CDG60_11670 a66a7ec808f76a62e5f530ec5cc99574 431 Pfam PF00202 Aminotransferase class-III 35 398 1.8E-74 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_11670 a66a7ec808f76a62e5f530ec5cc99574 431 SUPERFAMILY SSF53383 6 428 1.28E-127 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_11670 a66a7ec808f76a62e5f530ec5cc99574 431 Gene3D G3DSA:3.90.1150.10 10 422 1.5E-176 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Pfam PF11987 Translation-initiation factor 2 680 785 6.2E-35 T 23-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 398 554 4.4E-32 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Pfam PF00009 Elongation factor Tu GTP binding domain 399 554 9.1E-35 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 314 895 7.8E-245 T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Gene3D G3DSA:3.40.50.10050 689 796 2.2E-35 T 23-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 ProSitePatterns PS01176 Initiation factor 2 signature. 846 868 - T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Gene3D G3DSA:2.40.30.10 567 684 1.4E-39 T 23-10-2018 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Gene3D G3DSA:3.30.56.50 2 51 1.7E-7 T 23-10-2018 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 SUPERFAMILY SSF50447 568 650 1.83E-23 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 98 2.9E-14 T 23-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Gene3D G3DSA:3.40.50.300 393 566 1.9E-69 T 23-10-2018 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 SUPERFAMILY SSF52156 673 802 6.28E-35 T 23-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 893 16.622 T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 SUPERFAMILY SSF50447 797 893 9.62E-29 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Gene3D G3DSA:2.40.30.10 797 894 9.0E-29 T 23-10-2018 CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 SUPERFAMILY SSF46955 3 51 2.75E-8 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 SUPERFAMILY SSF52540 395 563 1.21E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02545 c7db1a0c93368e16956a1e6b5ca042dc 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 319 368 1.6E-11 T 23-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal CDG60_08370 d7c99e720d987c40db05778e8a94255d 139 SUPERFAMILY SSF55811 9 137 8.94E-24 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_08370 d7c99e720d987c40db05778e8a94255d 139 PRINTS PR00502 NUDIX hydrolase family signature 53 68 3.0E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_08370 d7c99e720d987c40db05778e8a94255d 139 PRINTS PR00502 NUDIX hydrolase family signature 39 53 3.0E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_08370 d7c99e720d987c40db05778e8a94255d 139 Pfam PF00293 NUDIX domain 13 125 5.0E-18 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_08370 d7c99e720d987c40db05778e8a94255d 139 Gene3D G3DSA:3.90.79.10 4 139 9.3E-27 T 23-10-2018 CDG60_08980 3d15208bdf32ab3996961e974b77587a 646 Pfam PF05057 Putative serine esterase (DUF676) 371 516 9.2E-5 T 23-10-2018 IPR007751 Domain of unknown function DUF676, lipase-like CDG60_08980 3d15208bdf32ab3996961e974b77587a 646 Gene3D G3DSA:3.40.50.1820 365 623 4.0E-25 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_08980 3d15208bdf32ab3996961e974b77587a 646 SUPERFAMILY SSF53474 367 628 2.68E-22 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_10015 a1d806769d9e9f8e7a6317093fff1891 89 Gene3D G3DSA:1.20.58.1690 6 85 6.4E-6 T 23-10-2018 IPR038434 YARHG domain superfamily CDG60_10015 a1d806769d9e9f8e7a6317093fff1891 89 Pfam PF13308 YARHG domain 28 83 1.9E-7 T 23-10-2018 IPR025582 YARHG domain CDG60_10015 a1d806769d9e9f8e7a6317093fff1891 89 SMART SM01324 11 84 1.0E-9 T 23-10-2018 IPR025582 YARHG domain CDG60_11735 685df284d42d35d97bff7ae270db33c1 431 Gene3D G3DSA:1.10.150.20 181 239 2.2E-7 T 23-10-2018 CDG60_11735 685df284d42d35d97bff7ae270db33c1 431 Gene3D G3DSA:2.30.40.20 16 79 1.6E-39 T 23-10-2018 CDG60_11735 685df284d42d35d97bff7ae270db33c1 431 Pfam PF11799 impB/mucB/samB family C-terminal domain 252 362 3.4E-7 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_11735 685df284d42d35d97bff7ae270db33c1 431 SUPERFAMILY SSF56672 7 245 1.25E-57 T 23-10-2018 CDG60_11735 685df284d42d35d97bff7ae270db33c1 431 Gene3D G3DSA:3.30.70.270 10 164 1.6E-39 T 23-10-2018 CDG60_11735 685df284d42d35d97bff7ae270db33c1 431 Pfam PF13438 Domain of unknown function (DUF4113) 380 420 7.1E-7 T 23-10-2018 IPR025188 Domain of unknown function DUF4113 CDG60_11735 685df284d42d35d97bff7ae270db33c1 431 Pfam PF00817 impB/mucB/samB family 11 157 1.6E-33 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_12445 4ea550f99de345cbc4ae77b59acc3a08 578 SUPERFAMILY SSF51338 28 574 6.0E-18 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_12445 4ea550f99de345cbc4ae77b59acc3a08 578 Gene3D G3DSA:2.30.40.10 37 550 4.0E-127 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_12445 4ea550f99de345cbc4ae77b59acc3a08 578 Gene3D G3DSA:3.20.20.140 91 532 4.0E-127 T 23-10-2018 CDG60_12445 4ea550f99de345cbc4ae77b59acc3a08 578 Pfam PF07969 Amidohydrolase family 82 573 1.8E-99 T 23-10-2018 IPR013108 Amidohydrolase 3 CDG60_12445 4ea550f99de345cbc4ae77b59acc3a08 578 Gene3D G3DSA:3.10.310.70 109 240 4.0E-127 T 23-10-2018 CDG60_12445 4ea550f99de345cbc4ae77b59acc3a08 578 SUPERFAMILY SSF51556 90 533 6.81E-18 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 SUPERFAMILY SSF54523 9 141 7.85E-20 T 23-10-2018 CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 30 122 1.1E-9 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.2E-8 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.2E-8 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 Gene3D G3DSA:3.30.700.10 9 150 3.0E-20 T 23-10-2018 CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 6.2E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16475 68887fcfa79624ecc708dc5449ac6029 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 3.8E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_14020 50bbd17c303b87ba6c4cf3f005f4957a 285 PIRSF PIRSF038471 4 285 2.2E-62 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDG60_14020 50bbd17c303b87ba6c4cf3f005f4957a 285 Pfam PF04085 rod shape-determining protein MreC 125 271 1.2E-35 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDG60_14020 50bbd17c303b87ba6c4cf3f005f4957a 285 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 275 3.5E-47 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDG60_14020 50bbd17c303b87ba6c4cf3f005f4957a 285 Gene3D G3DSA:2.40.10.350 182 259 1.0E-34 T 23-10-2018 CDG60_14020 50bbd17c303b87ba6c4cf3f005f4957a 285 Gene3D G3DSA:2.40.10.340 123 270 1.0E-34 T 23-10-2018 CDG60_07855 420fc904f0c699cced6daa78cc875e71 290 SUPERFAMILY SSF52540 40 191 6.84E-25 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07855 420fc904f0c699cced6daa78cc875e71 290 Gene3D G3DSA:3.40.50.300 51 191 6.1E-10 T 23-10-2018 CDG60_07855 420fc904f0c699cced6daa78cc875e71 290 Pfam PF05673 Protein of unknown function (DUF815) 36 284 3.3E-103 T 23-10-2018 IPR008533 Domain of unknown function DUF815 CDG60_10960 0dc1010878d0bfe9d6cc066f52ea2f37 349 PRINTS PR00069 Aldo-keto reductase signature 116 134 4.5E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_10960 0dc1010878d0bfe9d6cc066f52ea2f37 349 PRINTS PR00069 Aldo-keto reductase signature 167 184 4.5E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_10960 0dc1010878d0bfe9d6cc066f52ea2f37 349 SUPERFAMILY SSF51430 1 347 5.11E-104 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG60_10960 0dc1010878d0bfe9d6cc066f52ea2f37 349 Pfam PF00248 Aldo/keto reductase family 15 340 4.4E-69 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain CDG60_10960 0dc1010878d0bfe9d6cc066f52ea2f37 349 Gene3D G3DSA:3.20.20.100 1 349 9.1E-124 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG60_09025 9451c1da7daab6fc3e0f176e7b038059 408 Pfam PF14064 HmuY protein 230 388 6.0E-8 T 23-10-2018 IPR025921 HmuY protein CDG60_13400 0064a6d57fdfeb0823084791deec3b2f 160 SUPERFAMILY SSF55729 1 135 9.59E-23 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_13400 0064a6d57fdfeb0823084791deec3b2f 160 Pfam PF13673 Acetyltransferase (GNAT) domain 51 133 3.3E-18 T 23-10-2018 IPR000182 GNAT domain CDG60_13400 0064a6d57fdfeb0823084791deec3b2f 160 Gene3D G3DSA:3.40.630.30 1 153 4.1E-26 T 23-10-2018 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 458 29.346 T 23-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 436 7.4E-28 T 23-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Gene3D G3DSA:3.30.300.180 1 107 2.3E-20 T 23-10-2018 IPR038454 DnaA, N-terminal domain superfamily CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 SMART SM00382 156 286 9.2E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Pfam PF00308 Bacterial dnaA protein 123 341 1.1E-83 T 23-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Gene3D G3DSA:1.10.8.60 290 360 2.6E-21 T 23-10-2018 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Pfam PF11638 DnaA N-terminal domain 2 60 2.6E-12 T 23-10-2018 IPR024633 DnaA N-terminal domain CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 417 436 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 157 177 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 189 203 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 221 235 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 282 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 SUPERFAMILY SSF48295 356 458 3.66E-32 T 23-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 SMART SM00760 367 436 1.7E-38 T 23-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Gene3D G3DSA:1.10.1750.10 366 459 5.9E-31 T 23-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 ProSitePatterns PS01008 DnaA protein signature. 417 436 - T 23-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 3 456 1.0E-152 T 23-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 SUPERFAMILY SSF52540 123 336 3.55E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00745 d0625dbc7a77d9eb9a0ad2d598e9d0c2 459 Gene3D G3DSA:3.40.50.300 121 289 3.9E-45 T 23-10-2018 CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 312 326 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 Gene3D G3DSA:3.40.50.300 218 495 5.8E-115 T 23-10-2018 CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 Gene3D G3DSA:3.30.450.90 85 217 5.4E-52 T 23-10-2018 CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 SUPERFAMILY SSF160246 8 70 9.15E-14 T 23-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 Gene3D G3DSA:3.30.300.160 2 84 8.9E-6 T 23-10-2018 CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 8 490 1.4E-209 T 23-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 SUPERFAMILY SSF52540 102 490 1.54E-102 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 Pfam PF00437 Type II/IV secretion system protein 119 384 6.9E-88 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_14900 bc432169eaf6ddc6802c902ec845abee 495 SMART SM00382 245 368 1.3E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_14435 d68153950e2f54c7f2f890411c58d9a4 102 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 102 40.871 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit CDG60_14435 d68153950e2f54c7f2f890411c58d9a4 102 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 97 1.5E-35 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit CDG60_14435 d68153950e2f54c7f2f890411c58d9a4 102 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 100 3.0E-49 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit CDG60_14435 d68153950e2f54c7f2f890411c58d9a4 102 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 19 97 2.9E-23 T 23-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CDG60_13880 7c46f471fe934b64c24c57c71058ccd1 181 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 1.5E-28 T 23-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13880 7c46f471fe934b64c24c57c71058ccd1 181 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 18.279 T 23-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CDG60_13880 7c46f471fe934b64c24c57c71058ccd1 181 Gene3D G3DSA:1.20.58.1610 1 121 2.8E-33 T 23-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 PRINTS PR00502 NUDIX hydrolase family signature 48 63 5.2E-6 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 PRINTS PR00502 NUDIX hydrolase family signature 34 48 5.2E-6 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 SUPERFAMILY SSF51391 165 299 7.32E-24 T 23-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 SUPERFAMILY SSF55811 3 126 3.38E-28 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 Gene3D G3DSA:3.20.20.70 134 300 3.9E-26 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 Pfam PF00293 NUDIX domain 7 123 3.6E-16 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 Pfam PF02581 Thiamine monophosphate synthase 174 298 1.7E-18 T 23-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_11955 4e57856ac30535c3f061aef0a6576620 300 Gene3D G3DSA:3.90.79.10 1 129 1.9E-28 T 23-10-2018 CDG60_12395 16148bc0a0ac0876b031e081852471b6 252 Pfam PF16473 3' exoribonuclease, RNase T-like 3 164 3.1E-31 T 23-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain CDG60_12395 16148bc0a0ac0876b031e081852471b6 252 SUPERFAMILY SSF53098 3 173 6.45E-14 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_12395 16148bc0a0ac0876b031e081852471b6 252 Gene3D G3DSA:3.30.420.10 2 174 1.3E-8 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 3 334 7.5E-160 T 23-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 SUPERFAMILY SSF51569 1 272 8.61E-67 T 23-10-2018 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 Gene3D G3DSA:3.20.20.70 1 266 1.2E-85 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 339 196.598 T 23-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 Pfam PF00682 HMGL-like 3 260 9.5E-58 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 Pfam PF07836 DmpG-like communication domain 272 333 3.2E-28 T 23-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 Gene3D G3DSA:1.10.8.60 273 339 1.1E-28 T 23-10-2018 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 270 333 1.0E-25 T 23-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG60_02965 44149ad42e7be42b9fc847bbabc98f44 339 SUPERFAMILY SSF89000 286 335 1.02E-15 T 23-10-2018 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 Gene3D G3DSA:2.40.37.10 23 380 8.3E-96 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 52 70 - T 23-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01182 Ornithine decarboxylase signature 24 48 1.3E-20 T 23-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01182 Ornithine decarboxylase signature 94 118 1.3E-20 T 23-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01182 Ornithine decarboxylase signature 50 77 1.3E-20 T 23-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01182 Ornithine decarboxylase signature 124 146 1.3E-20 T 23-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01182 Ornithine decarboxylase signature 329 339 1.3E-20 T 23-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 Gene3D G3DSA:3.20.20.10 31 270 8.3E-96 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 SUPERFAMILY SSF51419 24 270 7.48E-63 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 SUPERFAMILY SSF50621 242 387 4.6E-30 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 267 2.8E-53 T 23-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 5.2E-18 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 5.2E-18 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 258 277 5.2E-18 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 5.2E-18 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_13075 ec289fc637972dfc7e136cc14a6f28a9 388 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 268 365 1.3E-13 T 23-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 Pfam PF00696 Amino acid kinase family 33 272 1.8E-25 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 SUPERFAMILY SSF55729 302 427 3.14E-18 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 16 450 6.1E-176 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 SUPERFAMILY SSF53633 12 297 2.51E-67 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 PIRSF PIRSF000423 6 450 9.4E-190 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 450 201.608 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 Gene3D G3DSA:3.40.630.30 298 450 8.5E-37 T 23-10-2018 CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 Gene3D G3DSA:3.40.1160.10 14 297 4.4E-90 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_00960 5586f33ba799ac10efd7035bffd63989 450 Pfam PF00583 Acetyltransferase (GNAT) family 330 410 1.0E-10 T 23-10-2018 IPR000182 GNAT domain CDG60_02840 cc412ee374846174b3d407947b8db641 371 Pfam PF00487 Fatty acid desaturase 82 356 3.8E-18 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00369 Flavodoxin signature 453 464 4.2E-10 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00369 Flavodoxin signature 509 528 4.2E-10 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00369 Flavodoxin signature 405 418 4.2E-10 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00369 Flavodoxin signature 484 494 4.2E-10 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 SUPERFAMILY SSF63380 558 717 1.7E-18 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 SUPERFAMILY SSF52343 720 858 2.1E-36 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 SUPERFAMILY SSF52218 403 544 2.65E-36 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 Pfam PF00175 Oxidoreductase NAD-binding domain 727 832 6.3E-13 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 Gene3D G3DSA:3.40.50.80 716 858 7.9E-40 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 Pfam PF03929 PepSY-associated TM region 7 378 7.9E-68 T 23-10-2018 IPR005625 PepSY-associated TM protein CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 Gene3D G3DSA:3.40.50.360 396 557 4.5E-36 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 Pfam PF00258 Flavodoxin 406 536 4.3E-24 T 23-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 794 810 1.8E-10 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 763 774 1.8E-10 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 662 669 1.8E-10 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 726 745 1.8E-10 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 750 759 1.8E-10 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13535 ea6417bdffe5121bff79e879edac4852 858 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 817 825 1.8E-10 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_12600 7fb011e02b900a67e89cd1958c225865 157 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 14 151 5.0E-31 T 23-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein CDG60_12600 7fb011e02b900a67e89cd1958c225865 157 Pfam PF04965 Gene 25-like lysozyme 33 130 5.1E-18 T 23-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CDG60_12600 7fb011e02b900a67e89cd1958c225865 157 SUPERFAMILY SSF160719 30 146 2.35E-10 T 23-10-2018 CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 Pfam PF08238 Sel1 repeat 40 73 4.1E-6 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 Pfam PF08238 Sel1 repeat 171 188 77.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 Pfam PF08238 Sel1 repeat 75 89 180.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 Pfam PF08238 Sel1 repeat 120 155 9.7E-11 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 Pfam PF08238 Sel1 repeat 207 225 0.025 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 SUPERFAMILY SSF81901 24 229 4.84E-29 T 23-10-2018 CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 Gene3D G3DSA:1.25.40.10 76 245 1.0E-29 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 Gene3D G3DSA:1.25.40.10 7 75 1.2E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 SMART SM00671 39 74 8.3E-9 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 SMART SM00671 156 191 21.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 SMART SM00671 193 225 0.44 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15735 9459947f7f807fcbd6d16fc5b887e9df 259 SMART SM00671 120 155 1.6E-10 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 7.6E-20 T 23-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 9.8E-114 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 PIRSF PIRSF001438 1 305 2.1E-120 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 3.9E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 3.9E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 3.9E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 3.9E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 3.9E-49 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 23-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 SUPERFAMILY SSF53850 2 215 3.26E-85 T 23-10-2018 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 Gene3D G3DSA:3.40.190.10 4 208 3.8E-85 T 23-10-2018 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 6.5E-80 T 23-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.394 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 SUPERFAMILY SSF54782 219 303 7.85E-24 T 23-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 Gene3D G3DSA:3.30.160.40 219 304 6.0E-27 T 23-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02140 4b37234f7da7d19074b4f0f15f6fd1af 305 Gene3D G3DSA:3.40.190.10 101 200 3.8E-85 T 23-10-2018 CDG60_09205 701e0f74a150ae087215e4fe641eb5ff 208 SUPERFAMILY SSF51306 72 203 1.7E-24 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_09205 701e0f74a150ae087215e4fe641eb5ff 208 Gene3D G3DSA:2.10.109.10 80 207 2.7E-14 T 23-10-2018 CDG60_09205 701e0f74a150ae087215e4fe641eb5ff 208 Gene3D G3DSA:1.10.260.40 1 62 5.1E-8 T 23-10-2018 CDG60_09205 701e0f74a150ae087215e4fe641eb5ff 208 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 14 60 1.1E-5 T 23-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 CDG60_09205 701e0f74a150ae087215e4fe641eb5ff 208 ProDom PD057771 CRO REGULATORY TRANSCRIPTION CP-933R REPRESSOR DNA-BINDING REGULATION BACTERIOPHAGE PROTEIN REGULATOR 1 60 0.001 T 23-10-2018 IPR020114 Cro repressor, HK022-type CDG60_09205 701e0f74a150ae087215e4fe641eb5ff 208 Pfam PF00717 Peptidase S24-like 122 187 1.9E-13 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_11080 f1a8e7031e5e3d39346d2250af1e494e 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 328 4.7E-125 T 23-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CDG60_11080 f1a8e7031e5e3d39346d2250af1e494e 333 SUPERFAMILY SSF51556 6 328 1.69E-91 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_11080 f1a8e7031e5e3d39346d2250af1e494e 333 Pfam PF00962 Adenosine/AMP deaminase 10 326 3.4E-80 T 23-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CDG60_11080 f1a8e7031e5e3d39346d2250af1e494e 333 Gene3D G3DSA:3.20.20.140 1 333 3.8E-108 T 23-10-2018 CDG60_11080 f1a8e7031e5e3d39346d2250af1e494e 333 Hamap MF_01962 Adenine deaminase. 6 318 89.688 T 23-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CDG60_07665 6af391e61f6ec8362a85f143e1669d82 389 TIGRFAM TIGR00843 benE: benzoate transporter 8 380 1.8E-106 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG60_07665 6af391e61f6ec8362a85f143e1669d82 389 Pfam PF03594 Benzoate membrane transport protein 6 382 1.3E-123 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG60_02165 3c013a58d8473eb058af2ddda77e91c4 108 SUPERFAMILY SSF81273 66 108 1.69E-11 T 23-10-2018 CDG60_02165 3c013a58d8473eb058af2ddda77e91c4 108 Pfam PF00816 H-NS histone family 12 101 3.8E-21 T 23-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CDG60_02165 3c013a58d8473eb058af2ddda77e91c4 108 SMART SM00528 63 108 8.3E-15 T 23-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CDG60_02165 3c013a58d8473eb058af2ddda77e91c4 108 Gene3D G3DSA:4.10.430.10 58 108 8.9E-18 T 23-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 CDG60_12515 b10cd4d81037559c44a9a8e3254dbdfd 313 Gene3D G3DSA:3.40.190.290 93 297 7.3E-50 T 23-10-2018 CDG60_12515 b10cd4d81037559c44a9a8e3254dbdfd 313 Gene3D G3DSA:1.10.10.10 2 92 1.7E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12515 b10cd4d81037559c44a9a8e3254dbdfd 313 SUPERFAMILY SSF46785 3 84 3.1E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_12515 b10cd4d81037559c44a9a8e3254dbdfd 313 SUPERFAMILY SSF53850 88 297 1.05E-36 T 23-10-2018 CDG60_12515 b10cd4d81037559c44a9a8e3254dbdfd 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.3E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12515 b10cd4d81037559c44a9a8e3254dbdfd 313 Pfam PF03466 LysR substrate binding domain 89 296 6.0E-35 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_14420 0f9823a9f1e2289b8cfc0af96953064f 226 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 3 209 8.1E-40 T 23-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CDG60_14420 0f9823a9f1e2289b8cfc0af96953064f 226 SUPERFAMILY SSF81301 107 165 7.27E-5 T 23-10-2018 CDG60_14420 0f9823a9f1e2289b8cfc0af96953064f 226 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 3 209 2.9E-50 T 23-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CDG60_05270 97aae85dea087c59e64d1ded17c920a7 103 SUPERFAMILY SSF141091 1 101 1.09E-38 T 23-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05270 97aae85dea087c59e64d1ded17c920a7 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_05270 97aae85dea087c59e64d1ded17c920a7 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.4E-41 T 23-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05270 97aae85dea087c59e64d1ded17c920a7 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.171 T 23-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05270 97aae85dea087c59e64d1ded17c920a7 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.2E-40 T 23-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 SUPERFAMILY SSF56349 22 296 4.12E-59 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 305 56.108 T 23-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 17 305 54.794 T 23-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 Gene3D G3DSA:1.10.150.130 19 107 2.2E-16 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 Pfam PF00589 Phage integrase family 122 290 7.8E-52 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 99 5.4E-15 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 29 305 4.7E-109 T 23-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CDG60_02045 dd83b7082808b53bdbd24b7363b080de 305 Gene3D G3DSA:1.10.443.10 119 299 1.1E-68 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_14310 2f11e3e801e369d2b7d5d844baa80444 513 SUPERFAMILY SSF47240 12 511 3.0E-162 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_14310 2f11e3e801e369d2b7d5d844baa80444 513 Gene3D G3DSA:1.10.620.20 13 513 1.8E-214 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDG60_14310 2f11e3e801e369d2b7d5d844baa80444 513 Pfam PF04945 YHS domain 431 463 1.4E-8 T 23-10-2018 IPR007029 YHS domain CDG60_14310 2f11e3e801e369d2b7d5d844baa80444 513 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 34 261 6.0E-69 T 23-10-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDG60_13245 2e0ff38528e01c6055e55073c238fc71 208 Gene3D G3DSA:3.40.50.1110 26 208 1.1E-66 T 23-10-2018 IPR036514 SGNH hydrolase superfamily CDG60_13245 2e0ff38528e01c6055e55073c238fc71 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 194 6.9E-26 T 23-10-2018 IPR013830 SGNH hydrolase-type esterase domain CDG60_13245 2e0ff38528e01c6055e55073c238fc71 208 SUPERFAMILY SSF52266 28 206 1.68E-47 T 23-10-2018 CDG60_17760 7512a4cbf0c07bc9c09f2982f069746a 230 Gene3D G3DSA:1.10.287.460 26 86 3.1E-13 T 23-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CDG60_17760 7512a4cbf0c07bc9c09f2982f069746a 230 SUPERFAMILY SSF54534 29 227 6.87E-58 T 23-10-2018 CDG60_17760 7512a4cbf0c07bc9c09f2982f069746a 230 Gene3D G3DSA:3.10.50.40 89 230 5.8E-53 T 23-10-2018 CDG60_17760 7512a4cbf0c07bc9c09f2982f069746a 230 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 19 130 4.1E-28 T 23-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CDG60_17760 7512a4cbf0c07bc9c09f2982f069746a 230 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 137 225 1.1E-26 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG60_01465 2c5d8ceb82057c7c8431b1528b012473 299 SUPERFAMILY SSF103481 35 137 8.63E-14 T 23-10-2018 CDG60_01465 2c5d8ceb82057c7c8431b1528b012473 299 Pfam PF00892 EamA-like transporter family 6 134 1.9E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_01465 2c5d8ceb82057c7c8431b1528b012473 299 Pfam PF00892 EamA-like transporter family 149 284 2.0E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_01465 2c5d8ceb82057c7c8431b1528b012473 299 SUPERFAMILY SSF103481 193 287 5.1E-8 T 23-10-2018 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 23-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 Gene3D G3DSA:3.30.300.10 12 271 1.2E-174 T 23-10-2018 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 SUPERFAMILY SSF55973 6 110 2.59E-46 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 PIRSF PIRSF000497 1 387 1.2E-172 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 Gene3D G3DSA:3.30.300.10 6 234 1.2E-174 T 23-10-2018 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 SUPERFAMILY SSF55973 234 386 7.46E-69 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 4.2E-42 T 23-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.135 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 375 5.6E-67 T 23-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 Gene3D G3DSA:3.30.300.10 103 378 1.2E-174 T 23-10-2018 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 1.8E-45 T 23-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 SUPERFAMILY SSF55973 111 233 2.04E-50 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 23-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_10610 b442d736d8bf566d64c82ec4504b5385 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 2.3E-188 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG60_02425 d04a2c87127ac71f255714e1c965d246 271 Pfam PF01614 Bacterial transcriptional regulator 129 246 6.9E-12 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal CDG60_02425 d04a2c87127ac71f255714e1c965d246 271 Pfam PF09339 IclR helix-turn-helix domain 8 54 6.8E-5 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDG60_02425 d04a2c87127ac71f255714e1c965d246 271 SUPERFAMILY SSF46785 4 73 2.83E-9 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_02425 d04a2c87127ac71f255714e1c965d246 271 SMART SM00346 3 94 0.0055 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDG60_02425 d04a2c87127ac71f255714e1c965d246 271 SUPERFAMILY SSF55781 80 247 1.77E-26 T 23-10-2018 CDG60_02425 d04a2c87127ac71f255714e1c965d246 271 Gene3D G3DSA:1.10.10.10 2 75 8.5E-13 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_02425 d04a2c87127ac71f255714e1c965d246 271 Gene3D G3DSA:3.30.450.40 76 244 2.9E-24 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 90 6.4E-10 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 29 3.2E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 7.5E-11 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 7.5E-11 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 Gene3D G3DSA:3.30.700.10 10 178 1.0E-23 T 23-10-2018 CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 1.2E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16515 ca8c5d12aa5a50113e62e2f9f778386e 186 SUPERFAMILY SSF54523 10 161 8.37E-21 T 23-10-2018 CDG60_13185 5de05e259ed4557cb436ae77fcc7deb5 168 Gene3D G3DSA:3.40.50.1820 5 166 1.0E-17 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_13185 5de05e259ed4557cb436ae77fcc7deb5 168 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 93 8.4E-11 T 23-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDG60_13185 5de05e259ed4557cb436ae77fcc7deb5 168 SUPERFAMILY SSF53474 8 156 1.99E-10 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 5 243 39.122 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 PIRSF PIRSF005457 1 242 1.2E-88 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 10 238 3.9E-90 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 Pfam PF00753 Metallo-beta-lactamase superfamily 48 173 5.9E-13 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 174 243 3.6E-22 T 23-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 SMART SM00849 15 173 3.6E-33 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 Gene3D G3DSA:3.60.15.10 4 243 4.3E-76 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_10795 a1560653af4a1c0dccde691d3ccbe62b 243 SUPERFAMILY SSF56281 4 243 7.04E-62 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 SUPERFAMILY SSF51735 4 158 7.89E-39 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 Gene3D G3DSA:1.10.1040.10 159 290 3.8E-31 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 23-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 SUPERFAMILY SSF48179 160 287 2.38E-29 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 157 5.2E-40 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 PIRSF PIRSF000103 1 288 4.9E-59 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 Gene3D G3DSA:3.40.50.720 1 157 3.3E-45 T 23-10-2018 CDG60_10010 5c2fcf7864aa22d30868406816826fc9 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 160 281 1.6E-36 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 9.2E-23 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 9.2E-23 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 9.2E-23 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 9.2E-23 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 9.2E-23 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:1.20.1640.10 531 1035 4.8E-253 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 SUPERFAMILY SSF82866 818 1043 1.7E-46 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Pfam PF00873 AcrB/AcrD/AcrF family 11 1036 8.0E-170 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 SUPERFAMILY SSF82693 585 675 1.4E-5 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 SUPERFAMILY SSF82693 46 142 2.09E-17 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 SUPERFAMILY SSF82714 191 270 1.57E-12 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:3.30.2090.10 735 823 4.8E-253 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:1.20.1640.10 18 510 4.8E-253 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:3.30.2090.10 185 274 4.8E-253 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:3.30.70.1430 585 683 4.8E-253 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:3.30.70.1320 142 332 4.8E-253 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 SUPERFAMILY SSF82714 738 822 3.14E-16 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:3.30.70.1430 46 831 4.8E-253 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 Gene3D G3DSA:3.30.70.1440 684 883 4.8E-253 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 SUPERFAMILY SSF82866 310 490 1.44E-36 T 23-10-2018 CDG60_01025 5049c1435e7a5522d7cd0e1a56263e45 1048 SUPERFAMILY SSF82693 143 329 1.6E-16 T 23-10-2018 CDG60_03720 68b223e10d7b7bc1ac65838bf5d629da 109 Pfam PF02699 Preprotein translocase subunit 24 97 1.4E-24 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG60_03720 68b223e10d7b7bc1ac65838bf5d629da 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 101 2.4E-25 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG60_03720 68b223e10d7b7bc1ac65838bf5d629da 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 1.1E-11 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG60_03720 68b223e10d7b7bc1ac65838bf5d629da 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 41 59 1.1E-11 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG60_03720 68b223e10d7b7bc1ac65838bf5d629da 109 SMART SM01323 19 101 2.5E-34 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 6.3E-29 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 6.3E-29 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 354 366 6.3E-29 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 6.3E-29 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 6.3E-29 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 6.3E-29 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 Gene3D G3DSA:3.50.50.60 12 373 4.9E-134 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 Pfam PF01266 FAD dependent oxidoreductase 12 333 4.1E-44 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 Gene3D G3DSA:1.10.8.870 400 467 2.0E-18 T 23-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 SUPERFAMILY SSF51905 11 301 1.17E-30 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 359 369 - T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 Gene3D G3DSA:3.30.9.10 89 326 4.9E-134 T 23-10-2018 CDG60_05845 1bab05bcf0c19a11b9a0851e9f46449e 509 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 388 482 8.1E-10 T 23-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG60_06830 b130a53e57af031f521b0b28508de1f8 402 SUPERFAMILY SSF56935 36 375 8.55E-30 T 23-10-2018 CDG60_06830 b130a53e57af031f521b0b28508de1f8 402 Gene3D G3DSA:2.40.160.60 24 402 3.9E-24 T 23-10-2018 CDG60_06225 c80a94014bf2a74fd29289481383c6fe 839 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 172 5.2E-9 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_06225 c80a94014bf2a74fd29289481383c6fe 839 SUPERFAMILY SSF56935 46 839 1.1E-44 T 23-10-2018 CDG60_06225 c80a94014bf2a74fd29289481383c6fe 839 Gene3D G3DSA:2.40.170.20 219 839 6.7E-11 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_06225 c80a94014bf2a74fd29289481383c6fe 839 Gene3D G3DSA:2.170.130.10 30 178 5.8E-10 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 Pfam PF00701 Dihydrodipicolinate synthetase family 4 277 3.5E-53 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 SMART SM01130 3 287 1.5E-76 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 PIRSF PIRSF001365 1 292 7.4E-65 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 SUPERFAMILY SSF51569 1 283 2.51E-70 T 23-10-2018 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 281 2.1E-64 T 23-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 Gene3D G3DSA:3.20.20.70 1 287 8.1E-73 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 4.9E-15 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 4.9E-15 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 4.9E-15 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_04510 79e52100bb332eb22715e87e27c92a17 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 4.9E-15 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.8E-134 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 SUPERFAMILY SSF103263 4 351 5.76E-142 T 23-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.109 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 Pfam PF01264 Chorismate synthase 10 345 9.6E-137 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 PIRSF PIRSF001456 3 359 5.4E-135 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_08250 eabd21b7f1caa4f3ddb6f36e67977f7d 364 Gene3D G3DSA:3.60.150.10 1 363 1.1E-160 T 23-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG60_10665 13bde3f7ec8b6f048d540b0d656a5e4e 364 SUPERFAMILY SSF54862 185 325 5.86E-16 T 23-10-2018 CDG60_10665 13bde3f7ec8b6f048d540b0d656a5e4e 364 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 17 325 45.66 T 23-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CDG60_10665 13bde3f7ec8b6f048d540b0d656a5e4e 364 Pfam PF08331 Domain of unknown function (DUF1730) 72 150 1.2E-22 T 23-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CDG60_10665 13bde3f7ec8b6f048d540b0d656a5e4e 364 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 203 214 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_10665 13bde3f7ec8b6f048d540b0d656a5e4e 364 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 24 358 5.6E-141 T 23-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CDG60_10665 13bde3f7ec8b6f048d540b0d656a5e4e 364 Pfam PF13484 4Fe-4S double cluster binding domain 202 266 1.9E-20 T 23-10-2018 CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 SUPERFAMILY SSF53901 213 407 3.46E-63 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 SMART SM00825 Beta-ketoacyl synthase 4 409 1.6E-13 T 23-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 Gene3D G3DSA:3.40.47.10 1 252 3.8E-59 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 7.5E-41 T 23-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 SUPERFAMILY SSF53901 1 251 1.24E-57 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 Gene3D G3DSA:3.40.47.10 258 408 3.8E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 364 6.9E-32 T 23-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDG60_04525 6706037ff2aa2534fdd5f5a0e0db2ec9 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site CDG60_18100 49884791e64594e4f0dc8a7e768a42a4 106 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 1.0E-21 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG60_18100 49884791e64594e4f0dc8a7e768a42a4 106 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.793 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG60_18100 49884791e64594e4f0dc8a7e768a42a4 106 Pfam PF01809 Haemolytic domain 4 68 3.3E-28 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG60_18100 49884791e64594e4f0dc8a7e768a42a4 106 SMART SM01234 1 68 1.7E-41 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG60_18100 49884791e64594e4f0dc8a7e768a42a4 106 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 8 72 3.9E-26 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG60_10335 377e2ab0824231dd8705e285257d32b2 127 SUPERFAMILY SSF54523 43 106 9.42E-14 T 23-10-2018 CDG60_10335 377e2ab0824231dd8705e285257d32b2 127 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10335 377e2ab0824231dd8705e285257d32b2 127 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.4E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10335 377e2ab0824231dd8705e285257d32b2 127 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.0E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10335 377e2ab0824231dd8705e285257d32b2 127 Gene3D G3DSA:3.30.1300.30 34 120 7.0E-12 T 23-10-2018 CDG60_10335 377e2ab0824231dd8705e285257d32b2 127 Pfam PF02501 Type II secretion system (T2SS), protein I 43 101 9.1E-12 T 23-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CDG60_10335 377e2ab0824231dd8705e285257d32b2 127 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 102 6.3E-16 T 23-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 CDG60_11345 177cccdab62d70fc69693f9e2acb894e 415 Pfam PF01738 Dienelactone hydrolase family 16 232 5.8E-44 T 23-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 CDG60_11345 177cccdab62d70fc69693f9e2acb894e 415 SUPERFAMILY SSF54427 239 383 6.0E-23 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_11345 177cccdab62d70fc69693f9e2acb894e 415 SUPERFAMILY SSF53474 2 233 4.09E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11345 177cccdab62d70fc69693f9e2acb894e 415 Gene3D G3DSA:3.40.50.1820 2 233 1.9E-52 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11345 177cccdab62d70fc69693f9e2acb894e 415 Gene3D G3DSA:3.10.450.50 240 378 1.3E-20 T 23-10-2018 CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 SUPERFAMILY SSF56042 176 342 3.14E-60 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 169 4.8E-15 T 23-10-2018 IPR016188 PurM-like, N-terminal domain CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 342 2.3E-35 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 354 46.615 T 23-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 Gene3D G3DSA:3.90.650.10 176 347 3.7E-67 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 SUPERFAMILY SSF55326 12 175 1.2E-51 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 4.4E-142 T 23-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_06590 2db1f15640d735dee6e1f48caa944387 356 Gene3D G3DSA:3.30.1330.10 11 175 8.0E-67 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_16990 80e56ffa2d8ee91153f4315d2dfe4667 243 SUPERFAMILY SSF51366 1 235 4.87E-75 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_16990 80e56ffa2d8ee91153f4315d2dfe4667 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.654 T 23-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CDG60_16990 80e56ffa2d8ee91153f4315d2dfe4667 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 2.7E-79 T 23-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CDG60_16990 80e56ffa2d8ee91153f4315d2dfe4667 243 Pfam PF00977 Histidine biosynthesis protein 3 229 1.4E-78 T 23-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CDG60_16990 80e56ffa2d8ee91153f4315d2dfe4667 243 Gene3D G3DSA:3.20.20.70 2 241 3.8E-85 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_06980 e34199e7b39973453618ecdbdafc5f7d 145 Gene3D G3DSA:3.10.129.10 5 145 5.4E-36 T 23-10-2018 CDG60_06980 e34199e7b39973453618ecdbdafc5f7d 145 SUPERFAMILY SSF54637 6 141 8.7E-35 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_06980 e34199e7b39973453618ecdbdafc5f7d 145 Pfam PF03061 Thioesterase superfamily 57 133 5.2E-10 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG60_06980 e34199e7b39973453618ecdbdafc5f7d 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 141 3.4E-20 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 690 796 1.6E-10 T 23-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 Pfam PF13654 AAA domain 65 580 3.9E-168 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 Gene3D G3DSA:1.10.8.60 490 578 5.4E-13 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 687 706 6.7E-11 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 747 765 6.7E-11 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 101 120 6.7E-11 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 717 736 6.7E-11 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 Gene3D G3DSA:3.40.50.300 279 489 2.8E-52 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 Gene3D G3DSA:3.40.50.300 48 228 4.0E-29 T 23-10-2018 CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 SUPERFAMILY SSF54211 604 796 1.9E-33 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_07225 42ea5dfbe45a8d8307b6a0b3f38af115 872 Gene3D G3DSA:3.30.230.10 583 817 2.7E-89 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_10825 8439161727948c63330f13b0215bef1a 145 Pfam PF03061 Thioesterase superfamily 27 109 1.8E-13 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG60_10825 8439161727948c63330f13b0215bef1a 145 SUPERFAMILY SSF54637 8 143 8.79E-38 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_10825 8439161727948c63330f13b0215bef1a 145 Gene3D G3DSA:3.10.129.10 1 141 4.2E-47 T 23-10-2018 CDG60_17150 5b3569a22d2aea4707c2b8de834968bc 117 Pfam PF06993 Protein of unknown function (DUF1304) 9 114 1.7E-42 T 23-10-2018 IPR009732 Protein of unknown function DUF1304 CDG60_12605 1e7865f3198f345eba1cfdb390303347 167 Pfam PF05638 Type VI secretion system effector, Hcp 5 139 1.0E-38 T 23-10-2018 IPR008514 Type VI secretion system effector, Hcp CDG60_12605 1e7865f3198f345eba1cfdb390303347 167 SUPERFAMILY SSF141452 1 162 4.97E-44 T 23-10-2018 IPR036624 Hcp1-like superfamily CDG60_12605 1e7865f3198f345eba1cfdb390303347 167 Gene3D G3DSA:2.30.110.20 1 167 3.8E-70 T 23-10-2018 IPR036624 Hcp1-like superfamily CDG60_12605 1e7865f3198f345eba1cfdb390303347 167 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 16 148 6.4E-26 T 23-10-2018 IPR008514 Type VI secretion system effector, Hcp CDG60_05355 f3c2d528d9d53691e4a25f1a6e07b6d0 175 Gene3D G3DSA:1.20.120.740 9 163 7.2E-7 T 23-10-2018 CDG60_05355 f3c2d528d9d53691e4a25f1a6e07b6d0 175 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 170 1.4E-23 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 CDG60_05355 f3c2d528d9d53691e4a25f1a6e07b6d0 175 SUPERFAMILY SSF101327 4 173 8.24E-25 T 23-10-2018 IPR036255 YgfB-like superfamily CDG60_05355 f3c2d528d9d53691e4a25f1a6e07b6d0 175 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 171 9.5E-22 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 Gene3D G3DSA:3.40.47.10 6 298 1.0E-144 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 Pfam PF02803 Thiolase, C-terminal domain 278 399 6.2E-46 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 PIRSF PIRSF000429 1 401 1.1E-112 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 SUPERFAMILY SSF53901 279 400 4.94E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 SUPERFAMILY SSF53901 3 278 6.19E-63 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 9.6E-133 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 Gene3D G3DSA:3.40.47.10 125 396 1.0E-144 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04300 ce89f543bfed30d6543ff3364cd92bf6 401 Pfam PF00108 Thiolase, N-terminal domain 5 228 8.4E-48 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 SMART SM00382 41 153 3.7E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 SUPERFAMILY SSF48019 236 418 4.82E-73 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 Gene3D G3DSA:1.10.8.60 153 223 5.3E-9 T 23-10-2018 CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 Gene3D G3DSA:1.10.3710.10 329 424 2.7E-30 T 23-10-2018 CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 Gene3D G3DSA:3.40.50.300 1 152 1.5E-43 T 23-10-2018 CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 Pfam PF16193 AAA C-terminal domain 180 250 4.4E-23 T 23-10-2018 IPR032423 AAA C-terminal domain CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 410 1.1E-67 T 23-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 147 7.2E-16 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 SUPERFAMILY SSF52540 4 219 6.3E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_17685 e120af0282202ecb275de31fe4ca4257 424 Gene3D G3DSA:1.20.272.10 224 328 3.1E-46 T 23-10-2018 CDG60_05020 6a1cb8b96133fda8d9267753b85fb9d8 307 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 116 146 0.0014 T 23-10-2018 IPR010221 VCBS repeat CDG60_05020 6a1cb8b96133fda8d9267753b85fb9d8 307 SUPERFAMILY SSF51120 173 279 9.81E-6 T 23-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CDG60_05020 6a1cb8b96133fda8d9267753b85fb9d8 307 Gene3D G3DSA:2.150.10.10 159 303 2.8E-8 T 23-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CDG60_05020 6a1cb8b96133fda8d9267753b85fb9d8 307 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 218 305 1.8E-15 T 23-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 185 275 3.2E-26 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 Gene3D G3DSA:1.20.5.100 186 213 3.6E-10 T 23-10-2018 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 Gene3D G3DSA:3.40.50.720 1 185 4.0E-12 T 23-10-2018 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 299 403 2.2E-21 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 Gene3D G3DSA:3.40.50.720 214 418 1.2E-60 T 23-10-2018 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 PIRSF PIRSF500134 1 418 2.6E-110 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 PIRSF PIRSF000124 1 418 5.4E-107 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 SUPERFAMILY SSF52413 284 413 1.96E-29 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 SMART SM00984 299 403 3.9E-33 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 SUPERFAMILY SSF51735 1 186 1.91E-6 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01140 8eaae27752ac40700c68c75c12670c74 418 SUPERFAMILY SSF48179 184 280 2.89E-24 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 Pfam PF03466 LysR substrate binding domain 90 293 2.9E-31 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 Gene3D G3DSA:3.40.190.10 162 268 1.4E-69 T 23-10-2018 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 Gene3D G3DSA:3.40.190.10 93 293 1.4E-69 T 23-10-2018 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 SUPERFAMILY SSF53850 90 296 4.89E-30 T 23-10-2018 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 Gene3D G3DSA:1.10.10.10 1 92 1.2E-33 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14345 3290a8f76253aa57ddb4c79a084abd8a 305 SUPERFAMILY SSF46785 1 85 7.96E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_02040 f9805d2f5d0010137730d4c6d63e723d 271 Gene3D G3DSA:3.40.30.10 119 271 7.1E-38 T 23-10-2018 CDG60_02040 f9805d2f5d0010137730d4c6d63e723d 271 Gene3D G3DSA:3.10.450.70 59 118 6.4E-6 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG60_02040 f9805d2f5d0010137730d4c6d63e723d 271 SUPERFAMILY SSF52833 129 271 2.76E-31 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_02040 f9805d2f5d0010137730d4c6d63e723d 271 Pfam PF13098 Thioredoxin-like domain 148 269 1.8E-25 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG60_02040 f9805d2f5d0010137730d4c6d63e723d 271 SUPERFAMILY SSF54423 62 117 6.67E-8 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG60_02040 f9805d2f5d0010137730d4c6d63e723d 271 Pfam PF10411 Disulfide bond isomerase protein N-terminus 63 117 3.7E-12 T 23-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDG60_02490 06e04bbc9da0e07f5a12f0d4762792c9 286 Gene3D G3DSA:1.20.120.1220 125 285 6.8E-6 T 23-10-2018 CDG60_02490 06e04bbc9da0e07f5a12f0d4762792c9 286 Pfam PF01478 Type IV leader peptidase family 139 247 7.1E-22 T 23-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CDG60_02490 06e04bbc9da0e07f5a12f0d4762792c9 286 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 127 3.3E-32 T 23-10-2018 IPR010627 Peptidase A24A, N-terminal CDG60_02490 06e04bbc9da0e07f5a12f0d4762792c9 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 6.1E-25 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG60_02490 06e04bbc9da0e07f5a12f0d4762792c9 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 6.1E-25 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG60_02490 06e04bbc9da0e07f5a12f0d4762792c9 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 6.1E-25 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG60_02490 06e04bbc9da0e07f5a12f0d4762792c9 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 6.1E-25 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG60_15885 d83f021c09dcb975fa187d8058ddbbfd 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 1.0E-8 T 23-10-2018 CDG60_15885 d83f021c09dcb975fa187d8058ddbbfd 38 SUPERFAMILY SSF57840 1 38 1.06E-16 T 23-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15885 d83f021c09dcb975fa187d8058ddbbfd 38 Pfam PF00444 Ribosomal protein L36 1 38 6.6E-19 T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15885 d83f021c09dcb975fa187d8058ddbbfd 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 3.7E-21 T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15885 d83f021c09dcb975fa187d8058ddbbfd 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15885 d83f021c09dcb975fa187d8058ddbbfd 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.56 T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_14330 0429a4c0cb10b4f8a365bce2d507be32 314 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 11 295 5.0E-151 T 23-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 CDG60_14330 0429a4c0cb10b4f8a365bce2d507be32 314 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 139 167 - T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG60_14330 0429a4c0cb10b4f8a365bce2d507be32 314 Pfam PF04444 Catechol dioxygenase N terminus 30 97 8.8E-25 T 23-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 CDG60_14330 0429a4c0cb10b4f8a365bce2d507be32 314 SUPERFAMILY SSF49482 7 297 5.36E-98 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG60_14330 0429a4c0cb10b4f8a365bce2d507be32 314 Gene3D G3DSA:2.60.130.10 4 314 6.1E-123 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG60_14330 0429a4c0cb10b4f8a365bce2d507be32 314 Pfam PF00775 Dioxygenase 108 296 4.3E-72 T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG60_15900 f6220fd2ddd51450bfc0456f63d70bc8 58 SUPERFAMILY SSF55129 1 58 2.22E-19 T 23-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDG60_15900 f6220fd2ddd51450bfc0456f63d70bc8 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.9E-16 T 23-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CDG60_15900 f6220fd2ddd51450bfc0456f63d70bc8 58 Gene3D G3DSA:3.30.1390.20 1 58 3.5E-22 T 23-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDG60_15900 f6220fd2ddd51450bfc0456f63d70bc8 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.113 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15900 f6220fd2ddd51450bfc0456f63d70bc8 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 23-10-2018 IPR018038 Ribosomal protein L30, conserved site CDG60_15900 f6220fd2ddd51450bfc0456f63d70bc8 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.8E-19 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15900 f6220fd2ddd51450bfc0456f63d70bc8 58 PIRSF PIRSF002211 1 58 1.3E-23 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 SUPERFAMILY SSF110324 2 80 3.84E-33 T 23-10-2018 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-18 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 Gene3D G3DSA:2.40.50.100 21 84 6.1E-30 T 23-10-2018 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.5E-37 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.5E-37 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.5E-37 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 5.6E-39 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 26.184 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_05275 cd813d6d3a884e73e9cbce69649d9716 84 Pfam PF01016 Ribosomal L27 protein 2 82 3.2E-38 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11095 3139992586df222967ad02e4cb31486a 128 Gene3D G3DSA:3.30.70.60 1 92 1.8E-29 T 23-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDG60_11095 3139992586df222967ad02e4cb31486a 128 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.466 T 23-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG60_11095 3139992586df222967ad02e4cb31486a 128 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.6E-31 T 23-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11095 3139992586df222967ad02e4cb31486a 128 Pfam PF01250 Ribosomal protein S6 3 91 7.0E-25 T 23-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11095 3139992586df222967ad02e4cb31486a 128 SUPERFAMILY SSF54995 1 101 1.57E-35 T 23-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11095 3139992586df222967ad02e4cb31486a 128 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 23-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG60_01310 4677f280d4da361f5825c8acf11f1415 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 210 1.8E-47 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_01310 4677f280d4da361f5825c8acf11f1415 334 PIRSF PIRSF000267 1 334 5.3E-91 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_01310 4677f280d4da361f5825c8acf11f1415 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 322 5.2E-98 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 SUPERFAMILY SSF54534 82 157 4.45E-24 T 23-10-2018 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.1E-27 T 23-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 2.4E-56 T 23-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 Gene3D G3DSA:3.10.50.30 76 158 2.3E-31 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 3.6E-29 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 Gene3D G3DSA:1.10.287.180 1 75 5.4E-28 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 SUPERFAMILY SSF46557 3 78 8.37E-26 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 PIRSF PIRSF006092 1 158 9.5E-51 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDG60_05735 bc571462be11c888c8b9fe16e3d461de 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 31.72 T 23-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 SMART SM01209 103 296 1.5E-137 T 23-10-2018 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Gene3D G3DSA:3.40.50.20 2 95 2.1E-35 T 23-10-2018 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Gene3D G3DSA:3.30.470.20 191 328 1.4E-56 T 23-10-2018 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 SUPERFAMILY SSF56059 104 319 2.65E-64 T 23-10-2018 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 3.8E-28 T 23-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 43.002 T 23-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 SMART SM01210 329 422 3.9E-49 T 23-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 SUPERFAMILY SSF52440 1 103 9.21E-36 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.0E-84 T 23-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Gene3D G3DSA:3.90.600.10 329 428 3.0E-34 T 23-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 23-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.4E-33 T 23-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 Gene3D G3DSA:3.30.1490.20 122 190 3.6E-28 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 2.5E-175 T 23-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG60_11215 b2ca87c1ab63c96e080c1f36e5378a26 428 SUPERFAMILY SSF51246 328 423 6.28E-31 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG60_04075 41bf879d192f1948e38dc78ee6f8eacb 355 Gene3D G3DSA:3.40.50.10800 125 348 1.9E-96 T 23-10-2018 CDG60_04075 41bf879d192f1948e38dc78ee6f8eacb 355 Gene3D G3DSA:3.40.50.10800 42 330 1.9E-96 T 23-10-2018 CDG60_04075 41bf879d192f1948e38dc78ee6f8eacb 355 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 355 67.464 T 23-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG60_04075 41bf879d192f1948e38dc78ee6f8eacb 355 SUPERFAMILY SSF142754 41 349 1.29E-108 T 23-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG60_04075 41bf879d192f1948e38dc78ee6f8eacb 355 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 41 350 3.6E-112 T 23-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG60_04075 41bf879d192f1948e38dc78ee6f8eacb 355 Pfam PF02445 Quinolinate synthetase A protein 42 348 6.0E-104 T 23-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG60_04075 41bf879d192f1948e38dc78ee6f8eacb 355 Gene3D G3DSA:3.40.50.10800 210 305 1.9E-96 T 23-10-2018 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 Pfam PF00216 Bacterial DNA-binding protein 6 96 2.9E-27 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 SUPERFAMILY SSF47729 6 97 2.06E-27 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 3.7E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 3.7E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 3.7E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 SMART SM00411 6 96 7.0E-36 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 7 97 6.3E-39 T 23-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CDG60_10285 f8ffeb65618e4a89ea496bfe3c9f79e5 102 Gene3D G3DSA:4.10.520.10 6 98 4.0E-31 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG60_04840 91d421391e0a2a3150f9048276c34da4 201 Gene3D G3DSA:3.40.50.1820 1 193 8.3E-41 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04840 91d421391e0a2a3150f9048276c34da4 201 Pfam PF06821 Serine hydrolase 6 186 6.3E-28 T 23-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CDG60_04840 91d421391e0a2a3150f9048276c34da4 201 SUPERFAMILY SSF53474 4 185 4.9E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Gene3D G3DSA:1.10.540.10 44 161 2.2E-88 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 451 4.8E-16 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 159 4.6E-12 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 8.6E-17 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 29 3.1E-7 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Gene3D G3DSA:1.20.140.10 283 452 2.2E-88 T 23-10-2018 CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 585 3.8E-22 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 Gene3D G3DSA:2.40.110.10 162 282 2.2E-88 T 23-10-2018 CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 SUPERFAMILY SSF47203 289 470 2.26E-45 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_11505 3a50bdd22a4e95d8a5b4326daf5ba4d0 593 SUPERFAMILY SSF56645 38 293 6.02E-52 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 SMART SM00448 10 124 2.4E-19 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 Gene3D G3DSA:3.40.50.2300 10 111 6.1E-16 T 23-10-2018 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 SUPERFAMILY SSF52172 11 198 5.97E-24 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 Pfam PF00072 Response regulator receiver domain 12 124 7.9E-18 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 SMART SM00421 165 222 1.3E-20 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 1.6E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 1.6E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 1.6E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 221 2.6E-19 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_07905 6ca697eb49decb6a8a9df1d9c5c4981c 228 Gene3D G3DSA:1.10.10.10 112 228 6.4E-33 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_03335 4be0772675c74caf1209b7028d725f17 288 SUPERFAMILY SSF55021 8 91 3.88E-14 T 23-10-2018 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 Gene3D G3DSA:3.40.50.170 94 288 4.2E-68 T 23-10-2018 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 287 44.038 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 PIRSF PIRSF036480 6 288 3.1E-110 T 23-10-2018 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 287 1.2E-116 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 Pfam PF00551 Formyl transferase 94 269 3.2E-36 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 1.1E-57 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 1.1E-57 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 1.1E-57 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 1.1E-57 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 1.1E-57 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 44 56 1.1E-57 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 SUPERFAMILY SSF53328 94 288 1.27E-56 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 Gene3D G3DSA:3.30.70.260 5 90 7.2E-23 T 23-10-2018 CDG60_03335 4be0772675c74caf1209b7028d725f17 288 Pfam PF01842 ACT domain 10 66 1.3E-7 T 23-10-2018 IPR002912 ACT domain CDG60_13990 83f6bb2c6729675f63dec088c32b2096 205 Gene3D G3DSA:3.40.50.1000 3 191 1.8E-78 T 23-10-2018 IPR023214 HAD superfamily CDG60_13990 83f6bb2c6729675f63dec088c32b2096 205 Pfam PF00702 haloacid dehalogenase-like hydrolase 62 164 2.1E-11 T 23-10-2018 CDG60_13990 83f6bb2c6729675f63dec088c32b2096 205 Gene3D G3DSA:3.90.1470.10 13 128 1.8E-78 T 23-10-2018 CDG60_13990 83f6bb2c6729675f63dec088c32b2096 205 SUPERFAMILY SSF56784 1 195 7.31E-45 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_13990 83f6bb2c6729675f63dec088c32b2096 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 201 1.6E-96 T 23-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 CDG60_13990 83f6bb2c6729675f63dec088c32b2096 205 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 160 2.0E-13 T 23-10-2018 CDG60_16265 4de61b834284f8a4b6b4d4f9f8e723f6 126 TIGRFAM TIGR00494 crcB: protein CrcB 4 118 6.6E-28 T 23-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDG60_16265 4de61b834284f8a4b6b4d4f9f8e723f6 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 120 18.909 T 23-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDG60_16265 4de61b834284f8a4b6b4d4f9f8e723f6 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 115 1.9E-24 T 23-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDG60_15275 435447c030374dc9738acf2869086b84 185 Gene3D G3DSA:3.30.420.10 1 185 7.5E-74 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_15275 435447c030374dc9738acf2869086b84 185 SUPERFAMILY SSF53098 5 181 6.51E-47 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_15275 435447c030374dc9738acf2869086b84 185 SMART SM00479 8 181 1.3E-20 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_15275 435447c030374dc9738acf2869086b84 185 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 43.36 T 23-10-2018 IPR022894 Oligoribonuclease GO:0000175 CDG60_15275 435447c030374dc9738acf2869086b84 185 Pfam PF00929 Exonuclease 10 171 1.8E-32 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_14245 f5517a999b227a21284e225dd0260239 380 Gene3D G3DSA:1.20.1090.10 182 380 1.8E-72 T 23-10-2018 CDG60_14245 f5517a999b227a21284e225dd0260239 380 Gene3D G3DSA:3.40.50.1970 1 181 2.4E-51 T 23-10-2018 CDG60_14245 f5517a999b227a21284e225dd0260239 380 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 372 8.2E-121 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG60_14245 f5517a999b227a21284e225dd0260239 380 SUPERFAMILY SSF56796 2 380 2.49E-120 T 23-10-2018 CDG60_10790 c91efbc9ff6e7c02154196494fd1b20e 411 Gene3D G3DSA:3.90.1150.10 29 406 1.0E-141 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_10790 c91efbc9ff6e7c02154196494fd1b20e 411 Gene3D G3DSA:3.40.640.10 61 302 1.0E-141 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_10790 c91efbc9ff6e7c02154196494fd1b20e 411 SUPERFAMILY SSF53383 11 409 2.99E-98 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_10790 c91efbc9ff6e7c02154196494fd1b20e 411 Pfam PF00155 Aminotransferase class I and II 42 403 5.5E-49 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_04550 9a4790529f928bacf356479a1472df37 396 SUPERFAMILY SSF50447 207 303 9.03E-31 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_04550 9a4790529f928bacf356479a1472df37 396 Gene3D G3DSA:3.40.50.300 1 205 4.4E-68 T 23-10-2018 CDG60_04550 9a4790529f928bacf356479a1472df37 396 Gene3D G3DSA:2.40.30.10 208 336 1.1E-53 T 23-10-2018 CDG60_04550 9a4790529f928bacf356479a1472df37 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.396 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_04550 9a4790529f928bacf356479a1472df37 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.8E-225 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_04550 9a4790529f928bacf356479a1472df37 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.0E-15 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_04550 9a4790529f928bacf356479a1472df37 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG60_04550 9a4790529f928bacf356479a1472df37 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.4E-19 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG60_04550 9a4790529f928bacf356479a1472df37 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.9E-57 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04550 9a4790529f928bacf356479a1472df37 396 Gene3D G3DSA:2.40.30.10 340 394 8.3E-28 T 23-10-2018 CDG60_04550 9a4790529f928bacf356479a1472df37 396 SUPERFAMILY SSF52540 6 221 3.07E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04550 9a4790529f928bacf356479a1472df37 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.8E-34 T 23-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDG60_04550 9a4790529f928bacf356479a1472df37 396 SUPERFAMILY SSF50465 300 394 1.06E-36 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG60_04550 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04550 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04550 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04550 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_04550 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 SUPERFAMILY SSF50447 207 303 9.03E-31 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_02220 9a4790529f928bacf356479a1472df37 396 Gene3D G3DSA:3.40.50.300 1 205 4.4E-68 T 23-10-2018 CDG60_02220 9a4790529f928bacf356479a1472df37 396 Gene3D G3DSA:2.40.30.10 208 336 1.1E-53 T 23-10-2018 CDG60_02220 9a4790529f928bacf356479a1472df37 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.396 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_02220 9a4790529f928bacf356479a1472df37 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.8E-225 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_02220 9a4790529f928bacf356479a1472df37 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.0E-15 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG60_02220 9a4790529f928bacf356479a1472df37 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.4E-19 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.9E-57 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 Gene3D G3DSA:2.40.30.10 340 394 8.3E-28 T 23-10-2018 CDG60_02220 9a4790529f928bacf356479a1472df37 396 SUPERFAMILY SSF52540 6 221 3.07E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02220 9a4790529f928bacf356479a1472df37 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.8E-34 T 23-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDG60_02220 9a4790529f928bacf356479a1472df37 396 SUPERFAMILY SSF50465 300 394 1.06E-36 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG60_02220 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_02220 9a4790529f928bacf356479a1472df37 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 Gene3D G3DSA:3.10.580.10 290 439 1.3E-37 T 23-10-2018 CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 SMART SM01091 440 520 2.5E-24 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 Pfam PF03471 Transporter associated domain 441 517 5.1E-18 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 Pfam PF03741 Integral membrane protein TerC family 17 205 3.0E-50 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 Pfam PF00571 CBS domain 377 426 0.0013 T 23-10-2018 IPR000644 CBS domain CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 SUPERFAMILY SSF56176 440 517 4.64E-19 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 SUPERFAMILY SSF54631 295 429 7.67E-20 T 23-10-2018 CDG60_01835 f5b6586b86d8d33c4e511ebc5429b893 525 Gene3D G3DSA:3.30.465.10 440 520 1.4E-20 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_16340 3307662bd408ab3ec39559e26baf1416 254 Pfam PF10127 Predicted nucleotidyltransferase 3 241 1.2E-45 T 23-10-2018 IPR018775 Nucleotidyltransferase, predicted CDG60_03370 cb36cf58146c38902be07c3e03115e67 198 SUPERFAMILY SSF52218 4 195 1.83E-58 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_03370 cb36cf58146c38902be07c3e03115e67 198 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 23-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CDG60_03370 cb36cf58146c38902be07c3e03115e67 198 Pfam PF03358 NADPH-dependent FMN reductase 12 139 3.2E-8 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG60_03370 cb36cf58146c38902be07c3e03115e67 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 195 9.3E-43 T 23-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CDG60_03370 cb36cf58146c38902be07c3e03115e67 198 Gene3D G3DSA:3.40.50.360 1 196 3.5E-62 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_17010 52fa30cb224f40dd9c1999a61c90ea81 252 Gene3D G3DSA:3.20.20.70 1 252 4.0E-110 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_17010 52fa30cb224f40dd9c1999a61c90ea81 252 Pfam PF00977 Histidine biosynthesis protein 5 234 1.5E-88 T 23-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CDG60_17010 52fa30cb224f40dd9c1999a61c90ea81 252 SUPERFAMILY SSF51366 1 251 1.26E-86 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_17010 52fa30cb224f40dd9c1999a61c90ea81 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 4.3E-114 T 23-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CDG60_17010 52fa30cb224f40dd9c1999a61c90ea81 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.623 T 23-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CDG60_10545 48f6b2cb9f5d6b3fbaf7066401dd8b77 503 Pfam PF00171 Aldehyde dehydrogenase family 27 490 8.6E-165 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_10545 48f6b2cb9f5d6b3fbaf7066401dd8b77 503 SUPERFAMILY SSF53720 13 495 1.31E-162 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_10545 48f6b2cb9f5d6b3fbaf7066401dd8b77 503 Gene3D G3DSA:3.40.309.10 266 461 5.5E-164 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_10545 48f6b2cb9f5d6b3fbaf7066401dd8b77 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG60_10545 48f6b2cb9f5d6b3fbaf7066401dd8b77 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG60_10545 48f6b2cb9f5d6b3fbaf7066401dd8b77 503 Gene3D G3DSA:3.40.605.10 23 489 5.5E-164 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_10930 e3bec78e207974f7a99c24fb311c1aad 162 Gene3D G3DSA:3.40.250.10 33 162 4.5E-34 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_10930 e3bec78e207974f7a99c24fb311c1aad 162 SMART SM00450 39 145 7.8E-14 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_10930 e3bec78e207974f7a99c24fb311c1aad 162 SUPERFAMILY SSF52821 34 159 5.24E-21 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_10930 e3bec78e207974f7a99c24fb311c1aad 162 Pfam PF00581 Rhodanese-like domain 41 138 2.5E-11 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 SUPERFAMILY SSF54211 217 382 1.9E-44 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 SUPERFAMILY SSF56719 388 617 1.23E-73 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 SUPERFAMILY SSF55874 3 214 4.85E-61 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 580 594 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.7E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 620 8.2E-287 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Gene3D G3DSA:3.30.565.10 1 215 6.8E-72 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 2.0E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Pfam PF01751 Toprim domain 413 507 2.5E-12 T 23-10-2018 IPR006171 TOPRIM domain CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 30 45 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 558 574 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 108 122 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 65 78 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.3E-59 T 23-10-2018 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Pfam PF00204 DNA gyrase B 218 385 1.0E-40 T 23-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Gene3D G3DSA:3.40.50.670 389 619 8.2E-88 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 23-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 554 616 2.7E-22 T 23-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 SMART SM00387 26 173 4.0E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 SMART SM00433 33 620 9.1E-198 T 23-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 624 46.028 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_17490 eda16b07e8a3027465d2b24fca06a7cd 626 Gene3D G3DSA:3.30.230.10 216 388 4.1E-53 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_01300 ad0220ac85bd32d4656fc7f98e49f4e5 102 SUPERFAMILY SSF53146 1 98 4.06E-14 T 23-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDG60_01300 ad0220ac85bd32d4656fc7f98e49f4e5 102 Gene3D G3DSA:3.30.420.130 1 102 7.3E-14 T 23-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily CDG60_01300 ad0220ac85bd32d4656fc7f98e49f4e5 102 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 11 96 9.9E-8 T 23-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CDG60_17665 ee3c9b592031970ce0eb8d5e08b52d5a 400 Gene3D G3DSA:1.20.1250.20 3 204 5.0E-40 T 23-10-2018 CDG60_17665 ee3c9b592031970ce0eb8d5e08b52d5a 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 83 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_17665 ee3c9b592031970ce0eb8d5e08b52d5a 400 SUPERFAMILY SSF103473 4 399 1.22E-76 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_17665 ee3c9b592031970ce0eb8d5e08b52d5a 400 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_17665 ee3c9b592031970ce0eb8d5e08b52d5a 400 Pfam PF07690 Major Facilitator Superfamily 17 360 4.6E-48 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_17665 ee3c9b592031970ce0eb8d5e08b52d5a 400 Gene3D G3DSA:1.20.1250.20 205 399 3.4E-26 T 23-10-2018 CDG60_12085 6c507edcefcd113f920f1d0979deab2d 202 Gene3D G3DSA:3.40.30.10 1 193 2.6E-28 T 23-10-2018 CDG60_12085 6c507edcefcd113f920f1d0979deab2d 202 SUPERFAMILY SSF52833 1 184 2.46E-27 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_12085 6c507edcefcd113f920f1d0979deab2d 202 Pfam PF01323 DSBA-like thioredoxin domain 2 183 4.9E-18 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG60_06355 af634c5405b2b06604cea83de6ad20de 503 PRINTS PR00113 Alkaline phosphatase signature 293 322 2.8E-19 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06355 af634c5405b2b06604cea83de6ad20de 503 PRINTS PR00113 Alkaline phosphatase signature 84 99 2.8E-19 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06355 af634c5405b2b06604cea83de6ad20de 503 PRINTS PR00113 Alkaline phosphatase signature 34 54 2.8E-19 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06355 af634c5405b2b06604cea83de6ad20de 503 Gene3D G3DSA:3.40.720.10 16 503 4.3E-131 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_06355 af634c5405b2b06604cea83de6ad20de 503 SUPERFAMILY SSF53649 13 503 3.46E-115 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_06355 af634c5405b2b06604cea83de6ad20de 503 SMART SM00098 35 502 6.4E-76 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06355 af634c5405b2b06604cea83de6ad20de 503 Pfam PF00245 Alkaline phosphatase 35 501 9.9E-97 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_13210 9cd4f7d5177cf2571c539b2897d90869 301 Gene3D G3DSA:3.40.190.10 165 265 5.2E-52 T 23-10-2018 CDG60_13210 9cd4f7d5177cf2571c539b2897d90869 301 Pfam PF03466 LysR substrate binding domain 91 294 2.0E-39 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_13210 9cd4f7d5177cf2571c539b2897d90869 301 Gene3D G3DSA:3.40.190.10 95 294 5.2E-52 T 23-10-2018 CDG60_13210 9cd4f7d5177cf2571c539b2897d90869 301 SUPERFAMILY SSF53850 92 298 9.48E-31 T 23-10-2018 CDG60_13210 9cd4f7d5177cf2571c539b2897d90869 301 SUPERFAMILY SSF46785 5 115 4.96E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_13210 9cd4f7d5177cf2571c539b2897d90869 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13210 9cd4f7d5177cf2571c539b2897d90869 301 Gene3D G3DSA:1.10.10.10 3 88 3.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 Gene3D G3DSA:1.20.1180.10 196 262 1.6E-23 T 23-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 PIRSF PIRSF000456 3 262 2.1E-103 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 Gene3D G3DSA:2.160.10.10 1 194 3.9E-61 T 23-10-2018 CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 3.6E-6 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 7 38 2.4E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 261 4.1E-97 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 262 43.273 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 261 2.9E-23 T 23-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 SUPERFAMILY SSF51161 3 262 2.95E-77 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_10190 122a2a65ce93f43a14bf5be40f755ef6 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 19 47 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG60_16235 4b9004215834f82d47da54788a412612 384 SMART SM00729 10 230 3.5E-50 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_16235 4b9004215834f82d47da54788a412612 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 375 6.9E-111 T 23-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 CDG60_16235 4b9004215834f82d47da54788a412612 384 Gene3D G3DSA:3.80.30.20 2 311 1.2E-90 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG60_16235 4b9004215834f82d47da54788a412612 384 Pfam PF06969 HemN C-terminal domain 311 372 2.5E-10 T 23-10-2018 IPR010723 HemN, C-terminal CDG60_16235 4b9004215834f82d47da54788a412612 384 Pfam PF04055 Radical SAM superfamily 15 185 7.4E-21 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_16235 4b9004215834f82d47da54788a412612 384 SUPERFAMILY SSF102114 10 384 6.02E-100 T 23-10-2018 CDG60_10185 00111bd1b121d1fe30108d5b6cf31c97 292 Gene3D G3DSA:1.25.40.10 172 292 2.1E-15 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_10185 00111bd1b121d1fe30108d5b6cf31c97 292 Pfam PF16331 TolA binding protein trimerisation 53 106 2.8E-8 T 23-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CDG60_10185 00111bd1b121d1fe30108d5b6cf31c97 292 Pfam PF13174 Tetratricopeptide repeat 176 207 0.0064 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_10185 00111bd1b121d1fe30108d5b6cf31c97 292 Pfam PF13174 Tetratricopeptide repeat 213 246 0.018 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_10185 00111bd1b121d1fe30108d5b6cf31c97 292 SUPERFAMILY SSF48452 174 289 1.9E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 334 64.132 T 23-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 1.9E-134 T 23-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 SUPERFAMILY SSF53067 101 312 3.11E-41 T 23-10-2018 CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 Pfam PF00814 Glycoprotease family 25 310 1.9E-104 T 23-10-2018 IPR000905 Gcp-like domain CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.4E-50 T 23-10-2018 IPR017861 Kae1/TsaD family CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.4E-50 T 23-10-2018 IPR017861 Kae1/TsaD family CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.4E-50 T 23-10-2018 IPR017861 Kae1/TsaD family CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 3.4E-50 T 23-10-2018 IPR017861 Kae1/TsaD family CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.4E-50 T 23-10-2018 IPR017861 Kae1/TsaD family CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.4E-50 T 23-10-2018 IPR017861 Kae1/TsaD family CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 Gene3D G3DSA:3.30.420.40 129 296 1.7E-127 T 23-10-2018 CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 23-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 309 3.4E-119 T 23-10-2018 IPR017861 Kae1/TsaD family CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 SUPERFAMILY SSF53067 3 121 1.14E-30 T 23-10-2018 CDG60_07840 e63eab6cd31d68a297c9aaa56a3d91c2 341 Gene3D G3DSA:3.30.420.40 3 318 1.7E-127 T 23-10-2018 CDG60_10400 9b4eab45c3decdf711b129a2db934313 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 26.343 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG60_10400 9b4eab45c3decdf711b129a2db934313 210 SUPERFAMILY SSF53335 7 208 3.59E-33 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_10400 9b4eab45c3decdf711b129a2db934313 210 Pfam PF02527 rRNA small subunit methyltransferase G 26 204 8.5E-50 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG60_10400 9b4eab45c3decdf711b129a2db934313 210 Gene3D G3DSA:3.40.50.150 3 210 3.9E-61 T 23-10-2018 CDG60_10400 9b4eab45c3decdf711b129a2db934313 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 208 2.5E-47 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG60_10400 9b4eab45c3decdf711b129a2db934313 210 PIRSF PIRSF003078 1 210 2.2E-50 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 157 174 3.3E-8 T 23-10-2018 CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 194 3.3E-8 T 23-10-2018 CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 195 215 3.3E-8 T 23-10-2018 CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 Pfam PF00691 OmpA family 111 206 1.6E-23 T 23-10-2018 IPR006665 OmpA-like domain CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 Gene3D G3DSA:3.30.1330.60 74 215 5.3E-45 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 SUPERFAMILY SSF103088 102 212 6.8E-37 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 ProSitePatterns PS01068 OmpA-like domain. 144 188 - T 23-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 PRINTS PR01021 OMPA domain signature 112 134 1.8E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 PRINTS PR01021 OMPA domain signature 142 157 1.8E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04620 f9b38d2c58cd84ee84de21f5352b987f 216 PRINTS PR01021 OMPA domain signature 157 173 1.8E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM01231 929 1066 4.6E-9 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM00448 1417 1530 2.4E-36 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1213 1231 8.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1157 1171 8.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1237 1250 8.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Pfam PF00072 Response regulator receiver domain 1419 1530 6.5E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM00260 1245 1391 2.4E-19 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM00387 1107 1253 5.9E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SUPERFAMILY SSF55874 1069 1250 6.42E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:1.20.120.160 16 120 4.4E-19 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:1.20.120.160 543 689 2.4E-25 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SUPERFAMILY SSF47226 217 323 2.36E-17 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SUPERFAMILY SSF47226 768 857 6.8E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:3.40.50.12740 1417 1541 7.0E-39 T 23-10-2018 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:2.30.30.40 1253 1386 9.3E-32 T 23-10-2018 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SUPERFAMILY SSF52172 1418 1535 3.13E-37 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:1.20.120.160 765 887 5.0E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM00073 217 311 3.9E-6 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM00073 762 859 0.0046 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM00073 23 120 2.8E-4 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SMART SM00073 546 643 5.8E-10 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SUPERFAMILY SSF47226 545 655 5.1E-25 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SUPERFAMILY SSF47226 23 121 1.22E-20 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 SUPERFAMILY SSF50341 1252 1389 8.5E-19 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1115 1251 6.4E-15 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Pfam PF01584 CheW-like domain 1258 1393 6.7E-17 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:3.30.565.10 1065 1252 4.1E-52 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Pfam PF01627 Hpt domain 25 94 2.5E-12 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Pfam PF01627 Hpt domain 768 832 1.3E-10 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Pfam PF01627 Hpt domain 548 634 3.5E-14 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Pfam PF01627 Hpt domain 220 287 1.8E-10 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:2.40.50.180 1276 1345 9.3E-32 T 23-10-2018 CDG60_13620 8f4d00e32850fb230ed01a76ac126745 1542 Gene3D G3DSA:1.20.120.160 215 343 4.0E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_04815 9be44dc31214d532fea93fecbcb3fe1a 304 Pfam PF01207 Dihydrouridine synthase (Dus) 1 297 4.6E-65 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_04815 9be44dc31214d532fea93fecbcb3fe1a 304 SUPERFAMILY SSF51395 1 299 5.13E-65 T 23-10-2018 CDG60_04815 9be44dc31214d532fea93fecbcb3fe1a 304 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 1 302 49.37 T 23-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CDG60_04815 9be44dc31214d532fea93fecbcb3fe1a 304 PIRSF PIRSF006621 1 304 1.2E-70 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_04815 9be44dc31214d532fea93fecbcb3fe1a 304 Gene3D G3DSA:1.20.225.30 237 304 2.1E-9 T 23-10-2018 CDG60_04815 9be44dc31214d532fea93fecbcb3fe1a 304 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 85 103 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG60_04815 9be44dc31214d532fea93fecbcb3fe1a 304 Gene3D G3DSA:3.20.20.70 1 234 2.6E-70 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_13445 1bf21f18d715db80c49673d2d96e02c8 202 SUPERFAMILY SSF52833 1 82 1.17E-16 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_13445 1bf21f18d715db80c49673d2d96e02c8 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 72 9.6E-11 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_13445 1bf21f18d715db80c49673d2d96e02c8 202 SUPERFAMILY SSF47616 79 196 3.34E-11 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG60_13445 1bf21f18d715db80c49673d2d96e02c8 202 Gene3D G3DSA:1.20.1050.10 81 190 1.3E-33 T 23-10-2018 CDG60_13445 1bf21f18d715db80c49673d2d96e02c8 202 Gene3D G3DSA:3.40.30.10 3 194 1.3E-33 T 23-10-2018 CDG60_08905 4ad42136faeae6b35ab386598df83bcf 354 Gene3D G3DSA:3.40.50.10210 54 332 3.8E-121 T 23-10-2018 CDG60_08905 4ad42136faeae6b35ab386598df83bcf 354 SUPERFAMILY SSF52733 2 350 2.88E-108 T 23-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG60_08905 4ad42136faeae6b35ab386598df83bcf 354 Pfam PF02277 Phosphoribosyltransferase 8 349 1.7E-124 T 23-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG60_08905 4ad42136faeae6b35ab386598df83bcf 354 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 349 9.7E-124 T 23-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG60_08905 4ad42136faeae6b35ab386598df83bcf 354 Gene3D G3DSA:1.10.1610.10 22 349 3.8E-121 T 23-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG60_08905 4ad42136faeae6b35ab386598df83bcf 354 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 351 33.717 T 23-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG60_01685 2525d09483913e3eb6f98fa48bdc0e60 152 Pfam PF11162 Protein of unknown function (DUF2946) 32 149 5.0E-5 T 23-10-2018 IPR021333 Protein of unknown function DUF2946 CDG60_08440 c566fe89e8336ae1105d1e6c75d102c8 137 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 53 131 6.5E-34 T 23-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CDG60_08440 c566fe89e8336ae1105d1e6c75d102c8 137 Gene3D G3DSA:3.30.1390.10 31 137 1.1E-41 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG60_08440 c566fe89e8336ae1105d1e6c75d102c8 137 SUPERFAMILY SSF54736 51 135 4.71E-32 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG60_08440 c566fe89e8336ae1105d1e6c75d102c8 137 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 48 131 28.501 T 23-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CDG60_06430 1151a409f86f163901b71d587a9d953f 269 Gene3D G3DSA:3.40.225.10 22 269 1.1E-74 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDG60_06430 1151a409f86f163901b71d587a9d953f 269 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 35 217 2.7E-46 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal CDG60_06430 1151a409f86f163901b71d587a9d953f 269 SUPERFAMILY SSF53639 30 226 6.47E-60 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDG60_06430 1151a409f86f163901b71d587a9d953f 269 SMART SM01007 35 217 3.0E-58 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal CDG60_16585 7ca690157bc030f77808ea66d2d70742 162 Pfam PF00114 Pilin (bacterial filament) 37 162 7.2E-7 T 23-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CDG60_16585 7ca690157bc030f77808ea66d2d70742 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16585 7ca690157bc030f77808ea66d2d70742 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.7E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16585 7ca690157bc030f77808ea66d2d70742 162 Gene3D G3DSA:3.30.700.10 8 162 4.4E-29 T 23-10-2018 CDG60_16585 7ca690157bc030f77808ea66d2d70742 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 6.2E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16585 7ca690157bc030f77808ea66d2d70742 162 SUPERFAMILY SSF54523 8 98 1.52E-19 T 23-10-2018 CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.5E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.5E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.5E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 3.5E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.5E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.7E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.7E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.7E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 8.9E-5 T 23-10-2018 CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 SUPERFAMILY SSF51735 1 252 2.78E-64 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 Gene3D G3DSA:3.40.50.720 1 255 4.1E-77 T 23-10-2018 CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_07400 937a9372da4c0cb956772434ec51d37e 256 Pfam PF00106 short chain dehydrogenase 6 206 9.3E-51 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09210 b88794fa2c84f902840365647e9f8a9d 734 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 1.3E-71 T 23-10-2018 IPR003776 YcaO-like domain CDG60_09210 b88794fa2c84f902840365647e9f8a9d 734 SUPERFAMILY SSF82784 1 126 2.75E-20 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG60_09210 b88794fa2c84f902840365647e9f8a9d 734 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 23-10-2018 IPR019938 YcaO domain protein CDG60_09210 b88794fa2c84f902840365647e9f8a9d 734 Pfam PF02566 OsmC-like protein 32 126 3.2E-10 T 23-10-2018 IPR003718 OsmC/Ohr family CDG60_09210 b88794fa2c84f902840365647e9f8a9d 734 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 7.7E-94 T 23-10-2018 IPR003776 YcaO-like domain CDG60_09210 b88794fa2c84f902840365647e9f8a9d 734 Gene3D G3DSA:3.30.300.20 2 128 5.6E-16 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_15685 1caa1a6096ae2429a9f5567c825a8f19 265 Pfam PF05742 Transport and Golgi organisation 2 1 238 1.8E-55 T 23-10-2018 IPR008551 Transport and Golgi organisation protein 2 CDG60_16870 9a8b1dc8fe01240285a94377eeab748e 434 Gene3D G3DSA:2.40.30.170 117 350 2.9E-65 T 23-10-2018 CDG60_16870 9a8b1dc8fe01240285a94377eeab748e 434 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 114 342 4.8E-32 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG60_16870 9a8b1dc8fe01240285a94377eeab748e 434 Gene3D G3DSA:2.40.420.20 105 412 2.9E-65 T 23-10-2018 CDG60_16870 9a8b1dc8fe01240285a94377eeab748e 434 Gene3D G3DSA:2.40.50.100 131 270 2.9E-65 T 23-10-2018 CDG60_16870 9a8b1dc8fe01240285a94377eeab748e 434 SUPERFAMILY SSF111369 128 349 4.18E-24 T 23-10-2018 CDG60_16870 9a8b1dc8fe01240285a94377eeab748e 434 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 104 422 2.0E-44 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG60_16870 9a8b1dc8fe01240285a94377eeab748e 434 Gene3D G3DSA:1.10.287.470 165 235 2.9E-65 T 23-10-2018 CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 SUPERFAMILY SSF54292 3 105 9.03E-28 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 Gene3D G3DSA:1.10.1060.10 106 235 8.4E-56 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 Gene3D G3DSA:3.10.20.30 1 105 6.1E-35 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 SUPERFAMILY SSF46548 106 232 8.89E-37 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 1.7E-30 T 23-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 5.8E-9 T 23-10-2018 CDG60_05595 f11bb859968203eb1b969fcde47803f7 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 1.6E-83 T 23-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 Gene3D G3DSA:3.10.150.10 129 263 1.9E-30 T 23-10-2018 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 SUPERFAMILY SSF55979 131 260 8.64E-20 T 23-10-2018 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 Gene3D G3DSA:3.10.150.10 264 382 7.5E-36 T 23-10-2018 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 122 1.1E-31 T 23-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 261 381 1.5E-34 T 23-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 SUPERFAMILY SSF55979 261 382 2.47E-34 T 23-10-2018 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 PIRSF PIRSF000804 1 382 1.1E-105 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 381 5.9E-94 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 SUPERFAMILY SSF55979 3 120 1.88E-23 T 23-10-2018 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 Pfam PF02767 DNA polymerase III beta subunit, central domain 134 259 7.4E-28 T 23-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 SMART SM00480 17 378 5.0E-116 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDG60_00750 5f989afb30e278b98a85d78bfe28d197 382 Gene3D G3DSA:3.10.150.10 1 126 1.6E-35 T 23-10-2018 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 Gene3D G3DSA:1.20.59.20 239 322 6.6E-16 T 23-10-2018 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 377 415 1.1E-11 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 Pfam PF09179 TilS substrate binding domain 252 319 6.8E-11 T 23-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 Pfam PF11734 TilS substrate C-terminal domain 377 423 1.9E-7 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 21 311 22.086 T 23-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 33 208 2.1E-51 T 23-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 SMART SM00977 373 447 3.7E-6 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 SUPERFAMILY SSF52402 23 237 7.45E-50 T 23-10-2018 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 SUPERFAMILY SSF56037 359 444 1.62E-14 T 23-10-2018 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 ProSitePatterns PS00032 'Homeobox' antennapedia-type protein signature. 404 409 - T 23-10-2018 IPR001827 Homeobox protein, antennapedia type, conserved site GO:0003677|GO:0003700|GO:0006355 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 Gene3D G3DSA:3.40.50.620 19 238 7.3E-62 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 SUPERFAMILY SSF82829 240 322 6.28E-20 T 23-10-2018 CDG60_14940 038f25b13a771a1deb07b8697220bae1 460 Pfam PF01171 PP-loop family 33 203 8.6E-49 T 23-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CDG60_14670 f1f928a3f827aedcadbeb67f3f4527cf 240 Gene3D G3DSA:3.30.70.1400 8 91 5.4E-19 T 23-10-2018 CDG60_14670 f1f928a3f827aedcadbeb67f3f4527cf 240 Gene3D G3DSA:2.40.30.160 124 228 1.7E-16 T 23-10-2018 CDG60_14670 f1f928a3f827aedcadbeb67f3f4527cf 240 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 115 179 1.5E-21 T 23-10-2018 IPR017703 YgfZ/GcvT conserved site CDG60_14670 f1f928a3f827aedcadbeb67f3f4527cf 240 SUPERFAMILY SSF103025 4 167 1.0E-35 T 23-10-2018 CDG60_14670 f1f928a3f827aedcadbeb67f3f4527cf 240 Pfam PF01571 Aminomethyltransferase folate-binding domain 3 90 8.4E-9 T 23-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 Gene3D G3DSA:3.30.930.10 160 508 8.6E-128 T 23-10-2018 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 SUPERFAMILY SSF55681 164 505 8.76E-115 T 23-10-2018 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 18 506 4.0E-200 T 23-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 Pfam PF01336 OB-fold nucleic acid binding domain 75 148 1.1E-10 T 23-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 389 405 7.9E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 259 7.9E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 211 7.9E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 217 233 7.9E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 264 281 7.9E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 Gene3D G3DSA:2.40.50.140 8 159 2.5E-35 T 23-10-2018 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 507 43.689 T 23-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 Pfam PF00152 tRNA synthetases class II (D, K and N) 165 504 7.9E-80 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_13180 e144ee32a3019250aee4df4b94aef11b 508 SUPERFAMILY SSF50249 15 157 5.14E-33 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_01260 1e24fb9537e8703f136702244ffc6b71 138 Pfam PF04143 Sulphur transport 68 126 8.8E-8 T 23-10-2018 IPR007272 Sulphur transport domain CDG60_00680 867a407ae51a1a10c57bba50c854377c 313 SUPERFAMILY SSF52540 16 258 2.59E-25 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00680 867a407ae51a1a10c57bba50c854377c 313 Gene3D G3DSA:3.40.50.300 18 248 4.0E-28 T 23-10-2018 CDG60_00680 867a407ae51a1a10c57bba50c854377c 313 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 79 226 2.0E-14 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_00680 867a407ae51a1a10c57bba50c854377c 313 SMART SM00382 75 229 1.4E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_05000 39c19d60c38873a4f2f37f8a47b0950b 78 SUPERFAMILY SSF47336 2 77 1.3E-21 T 23-10-2018 IPR036736 ACP-like superfamily CDG60_05000 39c19d60c38873a4f2f37f8a47b0950b 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 76 2.1E-28 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDG60_05000 39c19d60c38873a4f2f37f8a47b0950b 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 8.0E-14 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDG60_05000 39c19d60c38873a4f2f37f8a47b0950b 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-10-2018 IPR006162 Phosphopantetheine attachment site CDG60_05000 39c19d60c38873a4f2f37f8a47b0950b 78 Gene3D G3DSA:1.10.1200.10 2 77 5.9E-25 T 23-10-2018 IPR036736 ACP-like superfamily CDG60_05000 39c19d60c38873a4f2f37f8a47b0950b 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.09 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDG60_05000 39c19d60c38873a4f2f37f8a47b0950b 78 Pfam PF00550 Phosphopantetheine attachment site 7 73 1.9E-15 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain CDG60_10345 a33c0d6b89df2e8e71052e8fc5b7d24e 204 SUPERFAMILY SSF46689 3 74 4.68E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_10345 a33c0d6b89df2e8e71052e8fc5b7d24e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_10345 a33c0d6b89df2e8e71052e8fc5b7d24e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_10345 a33c0d6b89df2e8e71052e8fc5b7d24e 204 Gene3D G3DSA:1.10.357.10 1 185 8.1E-18 T 23-10-2018 CDG60_10345 a33c0d6b89df2e8e71052e8fc5b7d24e 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.6E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 Gene3D G3DSA:1.10.150.520 18 93 8.6E-41 T 23-10-2018 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 4.2E-33 T 23-10-2018 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 SUPERFAMILY SSF56784 1 218 3.69E-41 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 92 194 3.8E-14 T 23-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 Gene3D G3DSA:3.40.50.1000 5 214 8.6E-41 T 23-10-2018 IPR023214 HAD superfamily CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 4.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 4.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 4.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 4.7E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 125 192 3.1E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_04275 ba6631b1b3345c0e8f5de257c7cc68dd 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 187 7.9E-18 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 391 3.0E-147 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 386 8.9E-40 T 23-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 SUPERFAMILY SSF55347 127 274 1.24E-59 T 23-10-2018 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 SUPERFAMILY SSF69055 303 394 3.14E-30 T 23-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 Gene3D G3DSA:1.10.1740.10 312 398 6.5E-31 T 23-10-2018 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 1.2E-43 T 23-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 PIRSF PIRSF006205 2 398 8.3E-151 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 392 45.459 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 239 5.2E-39 T 23-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG60_10220 651c5686572ec45914cc953d744fafa4 398 SUPERFAMILY SSF51735 3 151 9.9E-42 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_10220 651c5686572ec45914cc953d744fafa4 398 Gene3D G3DSA:3.40.50.720 1 151 3.8E-55 T 23-10-2018 CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.8E-5 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.8E-5 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 Gene3D G3DSA:1.10.10.10 15 88 2.8E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 Gene3D G3DSA:3.40.640.10 119 485 2.0E-114 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 SUPERFAMILY SSF46785 17 86 2.43E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 SMART SM00345 24 83 6.4E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 SUPERFAMILY SSF53383 79 490 3.46E-83 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 Pfam PF00155 Aminotransferase class I and II 165 479 1.1E-21 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_14460 28987bb46036e93df6646e2b44aed3d9 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 1.2E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PRINTS PR00775 90kDa heat shock protein signature 122 144 5.3E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PRINTS PR00775 90kDa heat shock protein signature 192 210 5.3E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PRINTS PR00775 90kDa heat shock protein signature 95 112 5.3E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PRINTS PR00775 90kDa heat shock protein signature 174 191 5.3E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PRINTS PR00775 90kDa heat shock protein signature 77 94 5.3E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PRINTS PR00775 90kDa heat shock protein signature 28 50 5.3E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PRINTS PR00775 90kDa heat shock protein signature 7 27 5.3E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 Gene3D G3DSA:3.30.565.10 1 229 1.6E-76 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 Pfam PF00183 Hsp90 protein 188 637 1.3E-127 T 23-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 SUPERFAMILY SSF55874 7 217 4.68E-65 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 SUPERFAMILY SSF54211 245 502 1.37E-93 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 PIRSF PIRSF002583 1 639 2.0E-211 T 23-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 SMART SM00387 29 186 2.4E-5 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 Gene3D G3DSA:1.20.120.790 509 639 1.7E-41 T 23-10-2018 IPR037196 HSP90, C-terminal domain CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 SUPERFAMILY SSF110942 528 638 2.62E-33 T 23-10-2018 IPR037196 HSP90, C-terminal domain CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 184 3.6E-12 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 Gene3D G3DSA:3.40.50.11260 416 503 1.7E-31 T 23-10-2018 CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 Gene3D G3DSA:3.30.230.80 244 415 1.6E-66 T 23-10-2018 CDG60_02305 8379656ca5434158d9ae1cc869ca48a5 639 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 638 31.14 T 23-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 Gene3D G3DSA:3.55.50.30 275 346 1.2E-9 T 23-10-2018 CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 SMART SM00965 301 349 8.9E-11 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 Gene3D G3DSA:3.30.1370.120 348 455 2.2E-26 T 23-10-2018 IPR038591 NolW-like superfamily CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 276 714 6.5E-165 T 23-10-2018 IPR013355 Type IV pilus secretin PilQ CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 659 692 - T 23-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 Pfam PF07660 Secretin and TonB N terminus short domain 306 348 2.0E-9 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 Pfam PF00263 Bacterial type II and III secretion system protein 555 713 1.8E-49 T 23-10-2018 IPR004846 Type II/III secretion system GO:0009306 CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 Pfam PF11741 AMIN domain 55 132 1.7E-7 T 23-10-2018 IPR021731 AMIN domain CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 Gene3D G3DSA:2.60.40.3470 138 261 4.1E-29 T 23-10-2018 CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 Pfam PF03958 Bacterial type II/III secretion system short domain 375 454 8.2E-15 T 23-10-2018 IPR005644 NolW-like CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 701 715 2.3E-20 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 454 464 2.3E-20 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 575 2.3E-20 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_16745 2e1f6a2f578fe50938f1384aea43d1e0 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 678 696 2.3E-20 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_12640 c425b3d8a1b34d9e94eae28d28c1049f 267 Pfam PF09850 Type VI secretion system protein DotU 34 236 1.7E-49 T 23-10-2018 IPR017732 Type IV / VI secretion system, DotU CDG60_12640 c425b3d8a1b34d9e94eae28d28c1049f 267 Gene3D G3DSA:1.25.40.590 31 196 3.5E-36 T 23-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily CDG60_12640 c425b3d8a1b34d9e94eae28d28c1049f 267 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 33 242 9.1E-55 T 23-10-2018 IPR017732 Type IV / VI secretion system, DotU CDG60_07650 2ecd00746fbc1f70086eb76d82f07722 147 PIRSF PIRSF006276 1 147 1.4E-23 T 23-10-2018 IPR006015 Universal stress protein A CDG60_07650 2ecd00746fbc1f70086eb76d82f07722 147 PRINTS PR01438 Universal stress protein signature 106 118 2.2E-18 T 23-10-2018 IPR006015 Universal stress protein A CDG60_07650 2ecd00746fbc1f70086eb76d82f07722 147 PRINTS PR01438 Universal stress protein signature 3 21 2.2E-18 T 23-10-2018 IPR006015 Universal stress protein A CDG60_07650 2ecd00746fbc1f70086eb76d82f07722 147 PRINTS PR01438 Universal stress protein signature 124 146 2.2E-18 T 23-10-2018 IPR006015 Universal stress protein A CDG60_07650 2ecd00746fbc1f70086eb76d82f07722 147 Gene3D G3DSA:3.40.50.620 1 146 1.2E-36 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_07650 2ecd00746fbc1f70086eb76d82f07722 147 Pfam PF00582 Universal stress protein family 3 146 1.0E-29 T 23-10-2018 IPR006016 UspA CDG60_07650 2ecd00746fbc1f70086eb76d82f07722 147 SUPERFAMILY SSF52402 1 146 9.21E-36 T 23-10-2018 CDG60_14495 9129fbfc802d6f9e231d6242719882bd 933 SUPERFAMILY SSF52540 76 267 1.83E-11 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14495 9129fbfc802d6f9e231d6242719882bd 933 Pfam PF04851 Type III restriction enzyme, res subunit 24 249 7.5E-28 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG60_14495 9129fbfc802d6f9e231d6242719882bd 933 SUPERFAMILY SSF52540 202 437 2.25E-8 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14495 9129fbfc802d6f9e231d6242719882bd 933 Gene3D G3DSA:3.40.50.300 267 493 1.7E-24 T 23-10-2018 CDG60_14495 9129fbfc802d6f9e231d6242719882bd 933 Gene3D G3DSA:3.40.50.300 21 266 1.0E-8 T 23-10-2018 CDG60_08545 0410ab39b9343fd32a6e55cdda0aaa8e 225 Pfam PF12844 Helix-turn-helix domain 7 69 3.2E-11 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_08545 0410ab39b9343fd32a6e55cdda0aaa8e 225 Pfam PF00717 Peptidase S24-like 128 194 1.9E-8 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_08545 0410ab39b9343fd32a6e55cdda0aaa8e 225 SUPERFAMILY SSF47413 3 70 2.06E-16 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_08545 0410ab39b9343fd32a6e55cdda0aaa8e 225 SMART SM00530 9 64 2.5E-14 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_08545 0410ab39b9343fd32a6e55cdda0aaa8e 225 SUPERFAMILY SSF51306 85 212 5.23E-21 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_08545 0410ab39b9343fd32a6e55cdda0aaa8e 225 Gene3D G3DSA:1.10.260.40 1 68 4.7E-21 T 23-10-2018 CDG60_08545 0410ab39b9343fd32a6e55cdda0aaa8e 225 Gene3D G3DSA:2.10.109.10 82 214 1.3E-26 T 23-10-2018 CDG60_17395 351d84b5a33d36d1c6467e91846b4fda 365 Gene3D G3DSA:3.40.50.2000 187 349 4.5E-50 T 23-10-2018 CDG60_17395 351d84b5a33d36d1c6467e91846b4fda 365 Gene3D G3DSA:3.40.50.2000 5 186 3.5E-60 T 23-10-2018 CDG60_17395 351d84b5a33d36d1c6467e91846b4fda 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 7 361 8.2E-105 T 23-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_17395 351d84b5a33d36d1c6467e91846b4fda 365 SUPERFAMILY SSF53756 11 364 1.11E-113 T 23-10-2018 CDG60_17395 351d84b5a33d36d1c6467e91846b4fda 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 354 1.5E-39 T 23-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CDG60_17395 351d84b5a33d36d1c6467e91846b4fda 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 12 365 34.559 T 23-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_17395 351d84b5a33d36d1c6467e91846b4fda 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 148 1.6E-42 T 23-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Pfam PF00575 S1 RNA binding domain 641 711 7.7E-21 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Gene3D G3DSA:1.10.150.310 490 621 1.4E-48 T 23-10-2018 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Gene3D G3DSA:2.40.50.140 622 715 8.8E-29 T 23-10-2018 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Pfam PF12836 Helix-hairpin-helix motif 482 546 1.3E-24 T 23-10-2018 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 SUPERFAMILY SSF47781 461 548 6.67E-26 T 23-10-2018 IPR010994 RuvA domain 2-like CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 SUPERFAMILY SSF53098 312 460 6.9E-47 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Pfam PF09371 Tex-like protein N-terminal domain 8 188 8.0E-54 T 23-10-2018 IPR018974 Tex-like protein, N-terminal CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 SUPERFAMILY SSF47781 552 623 4.0E-19 T 23-10-2018 IPR010994 RuvA domain 2-like CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 SMART SM00732 316 415 6.4E-30 T 23-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 SUPERFAMILY SSF50249 628 714 2.39E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Gene3D G3DSA:1.10.10.650 1 108 5.1E-36 T 23-10-2018 IPR023319 Tex-like protein, HTH domain superfamily CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 SUPERFAMILY SSF158832 1 311 4.18E-87 T 23-10-2018 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Pfam PF16921 Tex protein YqgF-like domain 317 442 4.7E-49 T 23-10-2018 IPR032639 Tex protein, YqgF-like domain CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Gene3D G3DSA:1.10.3500.10 112 489 2.3E-133 T 23-10-2018 IPR023323 Tex-like domain superfamily CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 Gene3D G3DSA:3.30.420.140 315 442 2.3E-133 T 23-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CDG60_16905 e9589ea71596d8fa113d4ab426c7b173 787 SMART SM00316 640 711 2.7E-24 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_00770 3ae0d72d039aae56545656f737f99416 644 SMART SM00382 26 222 4.6E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_00770 3ae0d72d039aae56545656f737f99416 644 SMART SM00382 336 503 5.9E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_00770 3ae0d72d039aae56545656f737f99416 644 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_00770 3ae0d72d039aae56545656f737f99416 644 Pfam PF12848 ABC transporter 216 294 2.4E-28 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG60_00770 3ae0d72d039aae56545656f737f99416 644 SUPERFAMILY SSF52540 2 254 5.34E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00770 3ae0d72d039aae56545656f737f99416 644 Pfam PF00005 ABC transporter 328 459 1.5E-20 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_00770 3ae0d72d039aae56545656f737f99416 644 SUPERFAMILY SSF52540 295 513 1.59E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00770 3ae0d72d039aae56545656f737f99416 644 Gene3D G3DSA:3.40.50.300 276 536 5.7E-53 T 23-10-2018 CDG60_00770 3ae0d72d039aae56545656f737f99416 644 Gene3D G3DSA:3.40.50.300 4 275 4.3E-54 T 23-10-2018 CDG60_00770 3ae0d72d039aae56545656f737f99416 644 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_00770 3ae0d72d039aae56545656f737f99416 644 Pfam PF00005 ABC transporter 18 177 4.5E-20 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_10045 7a55e52026a113cff909a476147b595d 623 SUPERFAMILY SSF109998 42 237 7.85E-26 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily CDG60_10045 7a55e52026a113cff909a476147b595d 623 Pfam PF13616 PPIC-type PPIASE domain 255 361 9.2E-28 T 23-10-2018 CDG60_10045 7a55e52026a113cff909a476147b595d 623 Pfam PF13624 SurA N-terminal domain 1 158 5.0E-38 T 23-10-2018 CDG60_10045 7a55e52026a113cff909a476147b595d 623 Gene3D G3DSA:1.10.4030.30 41 194 7.3E-14 T 23-10-2018 CDG60_10045 7a55e52026a113cff909a476147b595d 623 SUPERFAMILY SSF54534 265 361 9.16E-23 T 23-10-2018 CDG60_10045 7a55e52026a113cff909a476147b595d 623 Gene3D G3DSA:3.10.50.40 262 364 2.0E-26 T 23-10-2018 CDG60_04305 17e39842459e67ac47439b94debc3842 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 1.8E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_04305 17e39842459e67ac47439b94debc3842 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 1.8E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_04305 17e39842459e67ac47439b94debc3842 336 Gene3D G3DSA:1.10.10.60 227 334 1.4E-25 T 23-10-2018 CDG60_04305 17e39842459e67ac47439b94debc3842 336 Pfam PF12833 Helix-turn-helix domain 255 331 1.1E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_04305 17e39842459e67ac47439b94debc3842 336 SUPERFAMILY SSF46689 283 331 3.45E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_04305 17e39842459e67ac47439b94debc3842 336 SMART SM00342 248 330 7.2E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_04305 17e39842459e67ac47439b94debc3842 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 6.9E-48 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_02755 0908a9eb91bf3cb5041a3d221230f44f 518 Pfam PF00795 Carbon-nitrogen hydrolase 227 470 1.4E-30 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDG60_02755 0908a9eb91bf3cb5041a3d221230f44f 518 Gene3D G3DSA:3.60.110.10 221 488 1.2E-15 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG60_02755 0908a9eb91bf3cb5041a3d221230f44f 518 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 19 495 21.988 T 23-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CDG60_02755 0908a9eb91bf3cb5041a3d221230f44f 518 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 72 457 5.3E-93 T 23-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CDG60_02755 0908a9eb91bf3cb5041a3d221230f44f 518 SUPERFAMILY SSF56317 220 489 3.14E-45 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 SUPERFAMILY SSF54909 65 149 4.29E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 Gene3D G3DSA:1.10.10.10 2 53 1.9E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 2.9E-18 T 23-10-2018 CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 Gene3D G3DSA:3.30.70.920 54 137 3.4E-22 T 23-10-2018 CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 SUPERFAMILY SSF46785 1 59 4.04E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 2.6E-16 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG60_10990 c4bf1aaffde8667614c8e4969e8977f8 151 SMART SM00344 1 110 8.4E-38 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 SUPERFAMILY SSF46894 138 237 2.01E-22 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 SMART SM00448 12 122 2.0E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 SMART SM00862 162 236 5.3E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 Gene3D G3DSA:3.40.50.2300 4 136 2.7E-37 T 23-10-2018 CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 SUPERFAMILY SSF52172 6 133 2.85E-40 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 Pfam PF00072 Response regulator receiver domain 14 123 1.1E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 236 3.7E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_00615 7466ae830ecb5379da94e42faca669a5 242 Gene3D G3DSA:1.10.10.10 137 239 8.2E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_17230 bec2091299ae2456ba7bf745a878e46d 387 ProSitePatterns PS00336 Beta-lactamase class-C active site. 89 96 - T 23-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 CDG60_17230 bec2091299ae2456ba7bf745a878e46d 387 SUPERFAMILY SSF56601 38 386 1.38E-76 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_17230 bec2091299ae2456ba7bf745a878e46d 387 Pfam PF00144 Beta-lactamase 42 383 3.5E-62 T 23-10-2018 IPR001466 Beta-lactamase-related CDG60_17230 bec2091299ae2456ba7bf745a878e46d 387 Gene3D G3DSA:3.40.710.10 30 387 7.7E-115 T 23-10-2018 CDG60_11665 33ee013532ddeae3f23c8d9d6b8d3446 138 SUPERFAMILY SSF143744 2 133 8.63E-33 T 23-10-2018 IPR038084 GlcG-like domain superfamily CDG60_11665 33ee013532ddeae3f23c8d9d6b8d3446 138 Gene3D G3DSA:3.30.450.150 1 137 6.3E-36 T 23-10-2018 IPR038084 GlcG-like domain superfamily CDG60_11665 33ee013532ddeae3f23c8d9d6b8d3446 138 Pfam PF03928 Haem-degrading 7 130 1.7E-26 T 23-10-2018 IPR005624 Haem-degrading CDG60_02460 4a7fb784eb09f977c8048e1a2df2935b 553 SUPERFAMILY SSF52540 1 210 3.23E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02460 4a7fb784eb09f977c8048e1a2df2935b 553 PIRSF PIRSF003128 1 550 6.3E-138 T 23-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CDG60_02460 4a7fb784eb09f977c8048e1a2df2935b 553 SUPERFAMILY SSF52540 3 500 1.03E-27 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02460 4a7fb784eb09f977c8048e1a2df2935b 553 Gene3D G3DSA:3.40.50.300 1 145 1.4E-21 T 23-10-2018 CDG60_02460 4a7fb784eb09f977c8048e1a2df2935b 553 Gene3D G3DSA:3.40.50.300 223 547 2.3E-47 T 23-10-2018 CDG60_02460 4a7fb784eb09f977c8048e1a2df2935b 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 545 5.5E-141 T 23-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CDG60_02460 4a7fb784eb09f977c8048e1a2df2935b 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 502 1.5E-17 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CDG60_03750 c9379efb209854824829a4887f4ec386 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 405 1.1E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_03750 c9379efb209854824829a4887f4ec386 425 SUPERFAMILY SSF55874 237 404 1.26E-38 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_03750 c9379efb209854824829a4887f4ec386 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 179 247 3.0E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_03750 c9379efb209854824829a4887f4ec386 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 6.2E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03750 c9379efb209854824829a4887f4ec386 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 6.2E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03750 c9379efb209854824829a4887f4ec386 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 6.2E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03750 c9379efb209854824829a4887f4ec386 425 SMART SM00388 179 247 3.1E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_03750 c9379efb209854824829a4887f4ec386 425 Gene3D G3DSA:3.30.565.10 250 403 1.1E-37 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_03750 c9379efb209854824829a4887f4ec386 425 SUPERFAMILY SSF47384 164 248 2.94E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_03750 c9379efb209854824829a4887f4ec386 425 Gene3D G3DSA:1.10.287.130 146 245 1.6E-11 T 23-10-2018 CDG60_03750 c9379efb209854824829a4887f4ec386 425 SMART SM00387 292 406 2.0E-29 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_03750 c9379efb209854824829a4887f4ec386 425 SUPERFAMILY SSF55781 33 168 4.76E-5 T 23-10-2018 CDG60_00660 a6bcb136b4ca8025cef85a66653062dc 421 Gene3D G3DSA:1.20.1720.10 15 391 8.2E-79 T 23-10-2018 CDG60_00660 a6bcb136b4ca8025cef85a66653062dc 421 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 390 1.6E-123 T 23-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CDG60_00660 a6bcb136b4ca8025cef85a66653062dc 421 SUPERFAMILY SSF103473 12 404 1.31E-59 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_00660 a6bcb136b4ca8025cef85a66653062dc 421 Pfam PF07690 Major Facilitator Superfamily 25 359 1.0E-40 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_00660 a6bcb136b4ca8025cef85a66653062dc 421 PRINTS PR01035 Tetracycline resistance protein signature 25 41 2.3E-5 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00660 a6bcb136b4ca8025cef85a66653062dc 421 PRINTS PR01035 Tetracycline resistance protein signature 141 163 2.3E-5 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00660 a6bcb136b4ca8025cef85a66653062dc 421 PRINTS PR01035 Tetracycline resistance protein signature 278 299 2.3E-5 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 Gene3D G3DSA:3.40.50.880 287 546 3.0E-102 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 Pfam PF06418 CTP synthase N-terminus 4 264 8.2E-119 T 23-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 Gene3D G3DSA:3.40.50.300 1 285 6.8E-123 T 23-10-2018 CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 SUPERFAMILY SSF52317 290 543 7.23E-84 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 Hamap MF_01227 CTP synthase [pyrG]. 2 542 49.535 T 23-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 SUPERFAMILY SSF52540 1 267 2.42E-114 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 Pfam PF00117 Glutamine amidotransferase class-I 302 537 8.0E-59 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG60_08120 6d8874387d9f2fdaeefde0f064393555 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 537 9.6E-242 T 23-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDG60_03995 ab469d544cc365f9083a9d29065d57df 169 Gene3D G3DSA:3.10.20.10 4 56 6.8E-37 T 23-10-2018 CDG60_03995 ab469d544cc365f9083a9d29065d57df 169 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 70 2.1E-19 T 23-10-2018 IPR011440 Domain of unknown function DUF1543 CDG60_03995 ab469d544cc365f9083a9d29065d57df 169 Gene3D G3DSA:3.50.100.10 57 156 6.8E-37 T 23-10-2018 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 Gene3D G3DSA:3.40.50.300 153 339 3.0E-59 T 23-10-2018 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 SMART SM00091 31 99 3.9E-6 T 23-10-2018 IPR000014 PAS domain CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 SUPERFAMILY SSF46689 420 467 8.51E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 Gene3D G3DSA:1.10.10.60 417 468 9.7E-7 T 23-10-2018 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 33 143 3.0E-13 T 23-10-2018 IPR000014 PAS domain CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 380 389 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 SMART SM00382 187 331 1.7E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 191 204 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 Pfam PF02954 Bacterial regulatory protein, Fis family 430 467 3.7E-5 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 Pfam PF00158 Sigma-54 interaction domain 171 335 1.3E-61 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 SUPERFAMILY SSF52540 171 411 2.07E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 SUPERFAMILY SSF55785 32 132 6.63E-13 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 Pfam PF13426 PAS domain 42 138 5.0E-8 T 23-10-2018 IPR000014 PAS domain CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 Gene3D G3DSA:3.30.450.20 30 147 3.0E-18 T 23-10-2018 CDG60_14240 25c70c2ed39449bc4f775ec6abceec29 469 Gene3D G3DSA:1.10.8.60 340 415 3.8E-19 T 23-10-2018 CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 Pfam PF12710 haloacid dehalogenase-like hydrolase 194 361 1.7E-22 T 23-10-2018 CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 SUPERFAMILY SSF55021 1 83 4.58E-10 T 23-10-2018 CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 SUPERFAMILY SSF56784 189 396 1.25E-53 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 193 363 1.7E-33 T 23-10-2018 CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 178 396 6.4E-81 T 23-10-2018 CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 Pfam PF13740 ACT domain 3 79 3.9E-22 T 23-10-2018 CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 Gene3D G3DSA:3.30.70.260 2 84 2.7E-9 T 23-10-2018 CDG60_17640 44d052a2fb7a6c4c75124cc19e30c32e 406 Gene3D G3DSA:3.40.50.1000 107 397 6.0E-85 T 23-10-2018 IPR023214 HAD superfamily CDG60_05115 d88e8f215d45944c13e405ed085efd85 416 SUPERFAMILY SSF103473 4 406 4.97E-24 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_05115 d88e8f215d45944c13e405ed085efd85 416 Gene3D G3DSA:1.20.1250.20 2 198 4.2E-7 T 23-10-2018 CDG60_05115 d88e8f215d45944c13e405ed085efd85 416 Pfam PF13000 Acetyl-coenzyme A transporter 1 6 154 1.9E-21 T 23-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 CDG60_05115 d88e8f215d45944c13e405ed085efd85 416 Gene3D G3DSA:1.20.1250.20 221 412 1.5E-7 T 23-10-2018 CDG60_17925 996a36e4039cf83c6a8e8f4e360f7ead 222 Gene3D G3DSA:2.40.400.10 7 162 7.9E-14 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CDG60_17925 996a36e4039cf83c6a8e8f4e360f7ead 222 SUPERFAMILY SSF160104 11 130 3.14E-14 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CDG60_17925 996a36e4039cf83c6a8e8f4e360f7ead 222 Pfam PF06314 Acetoacetate decarboxylase (ADC) 19 142 5.1E-10 T 23-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 SMART SM00382 111 332 2.2E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 SUPERFAMILY SSF57716 9 44 1.71E-10 T 23-10-2018 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 391 6.2E-15 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 Gene3D G3DSA:3.30.50.30 2 47 7.6E-17 T 23-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 SMART SM00994 8 47 1.4E-19 T 23-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 SUPERFAMILY SSF52540 59 401 8.22E-74 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 SMART SM01086 316 410 3.2E-33 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 Gene3D G3DSA:3.40.50.300 54 314 1.0E-110 T 23-10-2018 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 410 5.8E-205 T 23-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 Gene3D G3DSA:1.10.8.60 315 423 4.5E-38 T 23-10-2018 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 52.21 T 23-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 5.3E-51 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_15585 ace39931b53b003748f2fd7204f8e3f5 436 Pfam PF06689 ClpX C4-type zinc finger 9 45 1.8E-17 T 23-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CDG60_12925 91dd9192292179b392b740644f4675b3 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 32 42 4.4E-26 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDG60_12925 91dd9192292179b392b740644f4675b3 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 4.4E-26 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDG60_12925 91dd9192292179b392b740644f4675b3 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 191 199 4.4E-26 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDG60_12925 91dd9192292179b392b740644f4675b3 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 4.4E-26 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDG60_12925 91dd9192292179b392b740644f4675b3 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 78 92 4.4E-26 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDG60_12925 91dd9192292179b392b740644f4675b3 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 4.4E-26 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDG60_12925 91dd9192292179b392b740644f4675b3 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 4.4E-26 T 23-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CDG60_12925 91dd9192292179b392b740644f4675b3 319 Hamap MF_02098 Carnitine monooxygenase reductase subunit. 8 319 77.191 T 23-10-2018 IPR039003 Carnitine monooxygenase reductase subunit GO:0009437 CDG60_12925 91dd9192292179b392b740644f4675b3 319 Gene3D G3DSA:2.40.30.10 2 103 2.4E-20 T 23-10-2018 CDG60_12925 91dd9192292179b392b740644f4675b3 319 Pfam PF00175 Oxidoreductase NAD-binding domain 115 205 4.9E-7 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_12925 91dd9192292179b392b740644f4675b3 319 Gene3D G3DSA:3.40.50.80 104 223 4.4E-26 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_12925 91dd9192292179b392b740644f4675b3 319 SUPERFAMILY SSF54292 215 319 1.97E-24 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_12925 91dd9192292179b392b740644f4675b3 319 SUPERFAMILY SSF63380 5 102 1.13E-20 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_12925 91dd9192292179b392b740644f4675b3 319 Gene3D G3DSA:3.10.20.30 224 319 1.3E-23 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_12925 91dd9192292179b392b740644f4675b3 319 SUPERFAMILY SSF52343 101 228 6.02E-27 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_12925 91dd9192292179b392b740644f4675b3 319 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 241 310 7.8E-12 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG60_12925 91dd9192292179b392b740644f4675b3 319 Pfam PF00970 Oxidoreductase FAD-binding domain 11 104 4.1E-5 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_12925 91dd9192292179b392b740644f4675b3 319 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 268 276 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDG60_17120 d123acf5caaff7a987c5fde4eed4e589 454 Gene3D G3DSA:3.30.70.100 385 446 8.9E-7 T 23-10-2018 CDG60_17120 d123acf5caaff7a987c5fde4eed4e589 454 Pfam PF07690 Major Facilitator Superfamily 15 349 1.7E-41 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_17120 d123acf5caaff7a987c5fde4eed4e589 454 Gene3D G3DSA:1.20.1250.20 1 384 6.7E-71 T 23-10-2018 CDG60_17120 d123acf5caaff7a987c5fde4eed4e589 454 SUPERFAMILY SSF103473 6 384 2.88E-56 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 397 8.4E-156 T 23-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 SUPERFAMILY SSF51905 1 395 5.49E-35 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 Gene3D G3DSA:2.40.30.10 192 341 2.4E-57 T 23-10-2018 CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 3.0E-72 T 23-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 Pfam PF03486 HI0933-like protein 5 393 4.9E-78 T 23-10-2018 CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 Gene3D G3DSA:1.10.8.260 271 324 2.4E-57 T 23-10-2018 IPR023166 HI0933-like insert domain superfamily CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 SUPERFAMILY SSF160996 204 341 2.35E-13 T 23-10-2018 CDG60_02810 1cfc044f06d081a32bed0137507b747f 407 Gene3D G3DSA:3.50.50.60 6 392 2.4E-57 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 Gene3D G3DSA:3.30.1490.20 102 172 6.1E-26 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 351 8.0E-112 T 23-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 Pfam PF02222 ATP-grasp domain 106 275 1.2E-55 T 23-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 SUPERFAMILY SSF51246 299 364 2.51E-16 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 SUPERFAMILY SSF52440 3 96 1.58E-15 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 SMART SM01209 102 257 0.0087 T 23-10-2018 CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 Gene3D G3DSA:3.40.50.20 1 101 1.4E-25 T 23-10-2018 CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 347 39.089 T 23-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 Gene3D G3DSA:3.30.470.20 173 371 6.8E-74 T 23-10-2018 CDG60_17990 c21c61f980f9113c4b9ffa24ef5d505a 373 SUPERFAMILY SSF56059 97 295 1.5E-63 T 23-10-2018 CDG60_03740 a70ba6150659f411cf805aecf1949e9b 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 44.955 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG60_03740 a70ba6150659f411cf805aecf1949e9b 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 6.5E-136 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG60_03740 a70ba6150659f411cf805aecf1949e9b 345 SUPERFAMILY SSF111337 1 340 4.58E-127 T 23-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG60_03740 a70ba6150659f411cf805aecf1949e9b 345 Pfam PF02547 Queuosine biosynthesis protein 3 340 5.5E-127 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG60_03740 a70ba6150659f411cf805aecf1949e9b 345 Gene3D G3DSA:3.40.1780.10 14 340 3.3E-115 T 23-10-2018 CDG60_03740 a70ba6150659f411cf805aecf1949e9b 345 Gene3D G3DSA:2.40.10.240 63 159 3.3E-115 T 23-10-2018 CDG60_04860 46591984085612427cd004156a7dde14 231 Gene3D G3DSA:1.20.120.530 74 214 9.6E-10 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG60_04860 46591984085612427cd004156a7dde14 231 Gene3D G3DSA:1.10.10.10 5 73 2.7E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04860 46591984085612427cd004156a7dde14 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 5.0E-14 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_04860 46591984085612427cd004156a7dde14 231 SMART SM00345 13 71 4.2E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_04860 46591984085612427cd004156a7dde14 231 Pfam PF07729 FCD domain 82 202 2.6E-9 T 23-10-2018 IPR011711 GntR, C-terminal CDG60_04860 46591984085612427cd004156a7dde14 231 SUPERFAMILY SSF46785 5 75 3.15E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 531 2.7E-46 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 Pfam PF03129 Anticodon binding domain 543 616 1.7E-16 T 23-10-2018 IPR004154 Anticodon-binding CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 SUPERFAMILY SSF55186 66 242 2.35E-41 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 628 30.822 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 SUPERFAMILY SSF55681 244 528 5.77E-96 T 23-10-2018 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 Gene3D G3DSA:3.30.54.20 132 188 5.5E-40 T 23-10-2018 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 SUPERFAMILY SSF52954 532 631 6.04E-26 T 23-10-2018 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 Gene3D G3DSA:3.40.50.800 534 636 8.3E-29 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 625 3.2E-199 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 Gene3D G3DSA:3.30.930.10 224 533 3.5E-123 T 23-10-2018 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 SMART SM00863 171 220 0.0017 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 1.1E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 1.1E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 1.1E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 1.1E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 1.1E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_01205 e3746078c0c1999ecb6bb4e2405ea4a2 638 Gene3D G3DSA:3.30.980.10 71 222 5.5E-40 T 23-10-2018 CDG60_15035 06aae62aaf80ac8781623ad04c27e96b 205 Gene3D G3DSA:3.40.30.10 2 203 3.6E-82 T 23-10-2018 CDG60_15035 06aae62aaf80ac8781623ad04c27e96b 205 SUPERFAMILY SSF47616 85 201 3.06E-35 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG60_15035 06aae62aaf80ac8781623ad04c27e96b 205 Gene3D G3DSA:1.20.1050.10 87 194 3.6E-82 T 23-10-2018 CDG60_15035 06aae62aaf80ac8781623ad04c27e96b 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 195 7.9E-10 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG60_15035 06aae62aaf80ac8781623ad04c27e96b 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 80 5.2E-14 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_15035 06aae62aaf80ac8781623ad04c27e96b 205 SUPERFAMILY SSF52833 1 83 1.6E-21 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_03805 da96cc5f5d23d430bc9031ba19d1663c 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 6 290 4.9E-155 T 23-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDG60_03805 da96cc5f5d23d430bc9031ba19d1663c 292 Gene3D G3DSA:3.90.550.10 3 292 4.2E-85 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_03805 da96cc5f5d23d430bc9031ba19d1663c 292 Pfam PF00483 Nucleotidyl transferase 6 242 1.1E-72 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDG60_03805 da96cc5f5d23d430bc9031ba19d1663c 292 SUPERFAMILY SSF53448 5 291 9.24E-91 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 Pfam PF00355 Rieske [2Fe-2S] domain 43 131 3.2E-18 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 Gene3D G3DSA:2.102.10.10 41 162 7.4E-64 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 Gene3D G3DSA:3.90.380.10 18 224 7.4E-64 T 23-10-2018 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 181 369 8.4E-20 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 5.0E-19 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 5.0E-19 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 5.0E-19 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 5.0E-19 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 5.0E-19 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 SUPERFAMILY SSF55961 158 367 7.85E-33 T 23-10-2018 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 SUPERFAMILY SSF50022 15 157 4.19E-43 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_06700 7055f361b7e03c8b3e19e374049bc461 371 Gene3D G3DSA:3.90.380.10 250 371 3.2E-6 T 23-10-2018 CDG60_02030 7a88544118d8f343208712d62e80a896 379 SUPERFAMILY SSF53686 11 376 5.11E-101 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG60_02030 7a88544118d8f343208712d62e80a896 379 Gene3D G3DSA:3.40.50.1100 17 350 1.5E-115 T 23-10-2018 CDG60_02030 7a88544118d8f343208712d62e80a896 379 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 343 7.8E-64 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG60_02030 7a88544118d8f343208712d62e80a896 379 PIRSF PIRSF038945 1 376 7.8E-152 T 23-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 CDG60_02030 7a88544118d8f343208712d62e80a896 379 Gene3D G3DSA:3.40.50.1100 65 161 1.5E-115 T 23-10-2018 CDG60_02030 7a88544118d8f343208712d62e80a896 379 TIGRFAM TIGR00260 thrC: threonine synthase 11 350 4.6E-90 T 23-10-2018 IPR004450 Threonine synthase-like CDG60_02030 7a88544118d8f343208712d62e80a896 379 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 23-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 Gene3D G3DSA:2.30.38.10 368 443 8.2E-30 T 23-10-2018 CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 Gene3D G3DSA:3.40.50.980 194 367 6.6E-49 T 23-10-2018 CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 539 2.3E-11 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 Gene3D G3DSA:3.40.50.980 32 186 1.6E-42 T 23-10-2018 CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 SUPERFAMILY SSF56801 27 550 3.92E-131 T 23-10-2018 CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 Gene3D G3DSA:3.30.300.310 445 553 5.2E-26 T 23-10-2018 CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 Pfam PF00501 AMP-binding enzyme 41 449 4.7E-81 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG60_13090 d5a7d3192eaffa8ee9201e7d5d7a1b68 554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 Gene3D G3DSA:3.10.20.30 375 445 1.5E-20 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 SUPERFAMILY SSF81301 198 355 6.87E-19 T 23-10-2018 CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 SUPERFAMILY SSF81271 381 440 9.81E-14 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 Gene3D G3DSA:3.30.460.10 197 325 1.2E-7 T 23-10-2018 CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 SMART SM00471 47 157 2.0E-10 T 23-10-2018 IPR003607 HD/PDEase domain CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 Gene3D G3DSA:1.10.3210.10 4 194 3.1E-66 T 23-10-2018 CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 SMART SM00954 235 345 3.8E-6 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 Pfam PF13328 HD domain 32 178 9.3E-40 T 23-10-2018 IPR003607 HD/PDEase domain CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 Pfam PF02824 TGS domain 381 440 3.4E-15 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDG60_16555 08d8a36c4673e1c1e727e5ac54765874 701 SUPERFAMILY SSF109604 15 194 2.87E-60 T 23-10-2018 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 132 143 - T 23-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 SUPERFAMILY SSF69864 193 445 1.57E-80 T 23-10-2018 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 Gene3D G3DSA:3.40.50.620 17 194 5.7E-118 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 SUPERFAMILY SSF52402 8 191 3.31E-34 T 23-10-2018 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 Pfam PF00764 Arginosuccinate synthase 19 412 1.3E-59 T 23-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 20 28 - T 23-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 16 422 1.1E-162 T 23-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 Gene3D G3DSA:1.10.287.400 380 443 7.6E-31 T 23-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 4 446 68.325 T 23-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_06255 f7fc10f08a75fef2360a843d3437c8f7 447 Gene3D G3DSA:3.90.1260.10 77 370 5.7E-118 T 23-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 SUPERFAMILY SSF51735 4 245 2.58E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 3.9E-52 T 23-10-2018 CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 Gene3D G3DSA:3.40.50.720 1 247 1.3E-64 T 23-10-2018 CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.0E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.0E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 6.0E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.0E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 6.0E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03240 820fdf7c13a992597f9fb3a1b731279d 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 171 0.0075 T 23-10-2018 CDG60_03505 ddb8ba8a73074c31d032001a7f9cad3f 347 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 343 8.0E-115 T 23-10-2018 IPR017686 Phage/plasmid-like protein CDG60_03505 ddb8ba8a73074c31d032001a7f9cad3f 347 Pfam PF06067 Domain of unknown function (DUF932) 77 327 9.0E-77 T 23-10-2018 IPR026325 Protein of unknown function DUF932 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 Gene3D G3DSA:3.30.870.10 327 510 8.6E-71 T 23-10-2018 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 SUPERFAMILY SSF143724 123 324 3.34E-64 T 23-10-2018 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 Gene3D G3DSA:3.30.870.10 511 693 7.5E-69 T 23-10-2018 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 Hamap MF_00347 Polyphosphate kinase [ppk]. 17 693 27.97 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 PIRSF PIRSF015589 2 693 2.8E-278 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 Pfam PF02503 Polyphosphate kinase middle domain 135 332 1.4E-60 T 23-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 Gene3D G3DSA:3.30.1840.10 14 324 2.3E-102 T 23-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 SUPERFAMILY SSF56024 511 692 2.15E-72 T 23-10-2018 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 19 690 8.6E-288 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 Pfam PF13090 Polyphosphate kinase C-terminal domain 341 689 2.0E-154 T 23-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 SUPERFAMILY SSF140356 17 121 7.59E-36 T 23-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 Pfam PF13089 Polyphosphate kinase N-terminal domain 20 125 2.1E-34 T 23-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CDG60_13220 8c23a040913636c0896dbb5cec1c829a 693 SUPERFAMILY SSF56024 327 503 2.26E-56 T 23-10-2018 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 Gene3D G3DSA:3.40.50.720 201 432 1.0E-57 T 23-10-2018 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 181 1.8E-34 T 23-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 419 9.6E-20 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 SMART SM00984 318 419 5.3E-30 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 412 1.1E-117 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 SUPERFAMILY SSF51735 8 192 1.52E-47 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 5.8E-24 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 Gene3D G3DSA:3.40.50.720 2 199 2.1E-59 T 23-10-2018 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 PIRSF PIRSF000124 7 432 1.8E-55 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 PIRSF PIRSF500136 1 432 4.5E-149 T 23-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 SUPERFAMILY SSF48179 202 293 1.07E-24 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_01070 7d626c732e188959ef7b12946fc6838c 432 SUPERFAMILY SSF52413 303 430 1.22E-25 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDG60_01420 064addd3dfef57feaac19aaae43f489f 310 Pfam PF04471 Restriction endonuclease 165 282 5.7E-37 T 23-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 CDG60_01420 064addd3dfef57feaac19aaae43f489f 310 Gene3D G3DSA:3.40.91.100 137 301 5.1E-6 T 23-10-2018 CDG60_01420 064addd3dfef57feaac19aaae43f489f 310 Pfam PF14338 Mrr N-terminal domain 6 89 5.7E-21 T 23-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain CDG60_01420 064addd3dfef57feaac19aaae43f489f 310 SUPERFAMILY SSF52980 169 285 1.93E-18 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 SUPERFAMILY SSF82714 218 300 2.09E-15 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:3.30.2090.10 752 839 9.2E-289 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 SUPERFAMILY SSF82693 594 690 3.4E-5 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 SUPERFAMILY SSF82714 751 833 9.94E-16 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Pfam PF00873 AcrB/AcrD/AcrF family 31 1052 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:3.30.70.1440 701 896 9.2E-289 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:3.30.2090.10 214 305 9.2E-289 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 27 1062 0.0 T 23-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 SUPERFAMILY SSF82693 181 358 1.26E-21 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:1.20.1640.10 40 541 9.2E-289 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 SUPERFAMILY SSF82866 324 531 8.76E-38 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:1.20.1640.10 542 1050 9.2E-289 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 PRINTS PR00702 Acriflavin resistance protein family signature 391 412 5.8E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 PRINTS PR00702 Acriflavin resistance protein family signature 505 528 5.8E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 PRINTS PR00702 Acriflavin resistance protein family signature 37 61 5.8E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 PRINTS PR00702 Acriflavin resistance protein family signature 578 595 5.8E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 PRINTS PR00702 Acriflavin resistance protein family signature 364 387 5.8E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 PRINTS PR00702 Acriflavin resistance protein family signature 65 83 5.8E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:3.30.70.1430 67 847 9.2E-289 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:3.30.70.1320 160 358 9.2E-289 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 Gene3D G3DSA:3.30.70.1430 595 700 9.2E-289 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 SUPERFAMILY SSF82693 67 153 5.41E-22 T 23-10-2018 CDG60_16865 ec3ec083484f202302ed3c0b434f5999 1064 SUPERFAMILY SSF82866 835 1056 3.79E-51 T 23-10-2018 CDG60_05850 366961417c0ab489c38fc07327932194 610 Gene3D G3DSA:3.40.449.10 18 240 3.6E-256 T 23-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 6 607 50.242 T 23-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 Gene3D G3DSA:2.170.8.10 53 395 3.6E-256 T 23-10-2018 CDG60_05850 366961417c0ab489c38fc07327932194 610 Gene3D G3DSA:3.90.228.20 241 601 3.6E-256 T 23-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 18 237 8.6E-100 T 23-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 SUPERFAMILY SSF68923 4 240 2.82E-97 T 23-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 265 273 - T 23-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 PIRSF PIRSF001348 1 610 5.1E-266 T 23-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 241 603 2.2E-165 T 23-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG60_05850 366961417c0ab489c38fc07327932194 610 SUPERFAMILY SSF53795 241 606 1.12E-153 T 23-10-2018 CDG60_16810 3d1e47d56c924439fb5c81682cd72b2e 148 SUPERFAMILY SSF55729 1 134 1.22E-23 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_16810 3d1e47d56c924439fb5c81682cd72b2e 148 Pfam PF13508 Acetyltransferase (GNAT) domain 52 128 8.5E-13 T 23-10-2018 IPR000182 GNAT domain CDG60_16810 3d1e47d56c924439fb5c81682cd72b2e 148 Gene3D G3DSA:3.40.630.30 1 146 1.4E-22 T 23-10-2018 CDG60_07770 bcf952efed7673abd4fc1ecbd653c194 151 Gene3D G3DSA:3.40.50.1240 1 144 1.3E-27 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_07770 bcf952efed7673abd4fc1ecbd653c194 151 SMART SM00855 2 111 8.0E-11 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG60_07770 bcf952efed7673abd4fc1ecbd653c194 151 SUPERFAMILY SSF53254 1 121 9.15E-22 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_07770 bcf952efed7673abd4fc1ecbd653c194 151 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 1.9E-12 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 SMART SM00345 18 77 5.4E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 SUPERFAMILY SSF64288 65 242 4.08E-23 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 SUPERFAMILY SSF46785 11 91 1.61E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 SMART SM00866 97 237 9.5E-8 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 Gene3D G3DSA:3.40.1410.10 86 241 4.2E-19 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.3E-5 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.3E-5 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.1E-14 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 Gene3D G3DSA:1.10.10.10 12 81 2.2E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_13450 4c5dcb85e856710378b0122d2f0e2729 243 Pfam PF07702 UTRA domain 105 234 1.6E-14 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 729 760 7.7E-6 T 23-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 615 640 6.5E-5 T 23-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 25 651 3.0E-243 T 23-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 330 344 - T 23-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:3.40.50.140 21 185 5.2E-66 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Pfam PF01131 DNA topoisomerase 180 584 1.1E-126 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Pfam PF08272 Topoisomerase I zinc-ribbon-like 840 879 4.3E-17 T 23-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Pfam PF08272 Topoisomerase I zinc-ribbon-like 774 809 2.3E-11 T 23-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 411 427 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 510 524 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 335 344 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 213 231 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 128 141 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:3.30.65.10 599 666 3.0E-6 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:3.30.65.10 715 760 1.0E-6 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:3.30.65.10 761 823 5.9E-21 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SUPERFAMILY SSF57783 760 822 1.21E-14 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SMART SM00437 293 547 5.5E-123 T 23-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SMART SM00436 155 243 2.0E-49 T 23-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SUPERFAMILY SSF56712 24 627 1.83E-198 T 23-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:2.20.25.10 824 880 9.5E-22 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:2.70.20.10 235 493 9.7E-157 T 23-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SUPERFAMILY SSF57783 825 879 2.21E-17 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SMART SM00493 23 154 2.0E-29 T 23-10-2018 IPR006171 TOPRIM domain CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Hamap MF_00952 DNA topoisomerase 1 [topA]. 23 750 54.938 T 23-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SUPERFAMILY SSF57783 601 640 5.44E-9 T 23-10-2018 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:1.10.290.10 301 425 9.7E-157 T 23-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Gene3D G3DSA:1.10.460.10 187 591 9.7E-157 T 23-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 Pfam PF01751 Toprim domain 25 164 1.5E-32 T 23-10-2018 IPR006171 TOPRIM domain CDG60_03255 a788ab57ef8c617cdae247278e28b36f 880 SUPERFAMILY SSF57783 717 757 3.06E-6 T 23-10-2018 CDG60_09435 83b80e3a05a0d1622a159a2a0534a0f2 373 SUPERFAMILY SSF56112 16 344 1.6E-57 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_09435 83b80e3a05a0d1622a159a2a0534a0f2 373 Gene3D G3DSA:3.30.200.20 15 116 5.9E-27 T 23-10-2018 CDG60_09435 83b80e3a05a0d1622a159a2a0534a0f2 373 Pfam PF01636 Phosphotransferase enzyme family 37 263 2.3E-39 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG60_09435 83b80e3a05a0d1622a159a2a0534a0f2 373 Gene3D G3DSA:3.90.1200.10 122 353 2.0E-61 T 23-10-2018 CDG60_08000 560a92190484c57c7503999f267be078 176 Pfam PF04970 Lecithin retinol acyltransferase 9 108 3.0E-17 T 23-10-2018 IPR007053 LRAT-like domain CDG60_11325 4fdfb87d2539b5121807224f301c93c6 315 Pfam PF13557 Putative MetA-pathway of phenol degradation 59 311 8.0E-62 T 23-10-2018 IPR025737 MetA-pathway of phenol degradation, putative CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 SUPERFAMILY SSF46785 1 86 4.04E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.7E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 Pfam PF03466 LysR substrate binding domain 89 288 3.7E-35 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 Gene3D G3DSA:3.40.190.10 92 285 8.4E-41 T 23-10-2018 CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 Gene3D G3DSA:1.10.10.10 1 91 8.3E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 Gene3D G3DSA:3.40.190.10 160 264 8.4E-41 T 23-10-2018 CDG60_10550 871321d317e8ed6ae783d23f3e289935 290 SUPERFAMILY SSF53850 90 289 9.56E-32 T 23-10-2018 CDG60_12945 765e67d503dcd5415d388671ecf5e68f 549 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 503 5.8E-111 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG60_12945 765e67d503dcd5415d388671ecf5e68f 549 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 59 503 1.6E-131 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG60_08130 6be2a02135658f648d29131258923f2e 429 Gene3D G3DSA:3.20.20.120 128 429 1.2E-130 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG60_08130 6be2a02135658f648d29131258923f2e 429 SUPERFAMILY SSF54826 4 137 4.2E-54 T 23-10-2018 CDG60_08130 6be2a02135658f648d29131258923f2e 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 425 6.7E-132 T 23-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 Pfam PF03952 Enolase, N-terminal domain 4 134 2.0E-56 T 23-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 SMART SM01192 142 427 3.4E-210 T 23-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 Hamap MF_00318 Enolase [eno]. 2 415 43.689 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 SMART SM01193 4 134 3.1E-88 T 23-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 Gene3D G3DSA:3.30.390.10 1 127 7.5E-54 T 23-10-2018 IPR029017 Enolase-like, N-terminal CDG60_08130 6be2a02135658f648d29131258923f2e 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 23-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_08130 6be2a02135658f648d29131258923f2e 429 PRINTS PR00148 Enolase signature 367 384 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 PRINTS PR00148 Enolase signature 164 177 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 PRINTS PR00148 Enolase signature 37 51 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 PRINTS PR00148 Enolase signature 338 352 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 PRINTS PR00148 Enolase signature 107 123 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 PRINTS PR00148 Enolase signature 315 326 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 SUPERFAMILY SSF51604 142 416 1.84E-125 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG60_08130 6be2a02135658f648d29131258923f2e 429 PIRSF PIRSF001400 1 427 2.4E-188 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_08130 6be2a02135658f648d29131258923f2e 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.1E-199 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_05265 2cc7fe56b0bebb8ec398438bbcd96ca5 325 Pfam PF00348 Polyprenyl synthetase 35 271 8.8E-72 T 23-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CDG60_05265 2cc7fe56b0bebb8ec398438bbcd96ca5 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site CDG60_05265 2cc7fe56b0bebb8ec398438bbcd96ca5 325 SUPERFAMILY SSF48576 5 323 8.48E-95 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG60_05265 2cc7fe56b0bebb8ec398438bbcd96ca5 325 Gene3D G3DSA:1.10.600.10 2 324 1.3E-106 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG60_05265 2cc7fe56b0bebb8ec398438bbcd96ca5 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 SMART SM00434 12 462 5.6E-218 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 736 32.943 T 23-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Gene3D G3DSA:2.120.10.90 501 736 1.0E-16 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 735 0.0 T 23-10-2018 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 SUPERFAMILY SSF101904 498 735 8.37E-48 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Gene3D G3DSA:3.30.1360.40 239 332 2.3E-175 T 23-10-2018 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Gene3D G3DSA:3.90.199.10 33 484 2.3E-175 T 23-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Gene3D G3DSA:1.10.268.10 370 455 2.3E-175 T 23-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 SUPERFAMILY SSF56719 32 484 1.7E-154 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 596 631 0.49 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 690 1.3E-4 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_01880 66bbd06c934a4b53fbef8b811729b66e 739 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 1.6E-134 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_15125 63d083aff49dba263a046495e385ef00 257 SUPERFAMILY SSF51735 4 239 9.87E-59 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.8E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.8E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 8.8E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.8E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 8.8E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 Pfam PF00106 short chain dehydrogenase 4 189 1.1E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.2E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15125 63d083aff49dba263a046495e385ef00 257 Gene3D G3DSA:3.40.50.720 1 225 7.8E-55 T 23-10-2018 CDG60_04055 d9bdf69e8fa180f11b0537e7d185f0f3 212 PIRSF PIRSF000239 1 209 5.7E-76 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_04055 d9bdf69e8fa180f11b0537e7d185f0f3 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 1.6E-10 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_04055 d9bdf69e8fa180f11b0537e7d185f0f3 212 Gene3D G3DSA:3.30.1020.10 146 210 1.1E-27 T 23-10-2018 CDG60_04055 d9bdf69e8fa180f11b0537e7d185f0f3 212 SUPERFAMILY SSF52833 3 209 5.49E-66 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_04055 d9bdf69e8fa180f11b0537e7d185f0f3 212 Gene3D G3DSA:3.40.30.10 1 145 4.2E-48 T 23-10-2018 CDG60_04055 d9bdf69e8fa180f11b0537e7d185f0f3 212 Pfam PF00578 AhpC/TSA family 6 135 9.9E-30 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_04415 a1e683586727958819adc4888fd3d7a2 342 Pfam PF01435 Peptidase family M48 172 334 3.1E-24 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 SUPERFAMILY SSF54862 1 97 9.16E-25 T 23-10-2018 CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 Gene3D G3DSA:3.30.70.20 2 102 7.0E-33 T 23-10-2018 CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 9.9E-19 T 23-10-2018 IPR022569 Ferredoxin, C-terminal CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 4.5E-18 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 4.5E-18 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 4.5E-18 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CDG60_11355 bc69fa52734d71bd34d7665198e85e41 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.6E-7 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 Pfam PF00255 Glutathione peroxidase 5 111 2.6E-39 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 SUPERFAMILY SSF52833 4 180 3.01E-53 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 PIRSF PIRSF000303 1 181 4.4E-60 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 Gene3D G3DSA:3.40.30.10 1 181 1.2E-60 T 23-10-2018 CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 23-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.5E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 2.5E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_01640 ed5e4759d878486ebb410f55d8b36673 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.5E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_15315 2e7866fb3d84f8acaeaeb11275fed205 421 Gene3D G3DSA:3.40.50.10300 197 419 1.7E-78 T 23-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDG60_15315 2e7866fb3d84f8acaeaeb11275fed205 421 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 199 382 1.9E-70 T 23-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDG60_15315 2e7866fb3d84f8acaeaeb11275fed205 421 Gene3D G3DSA:3.40.50.1950 4 194 3.3E-60 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDG60_15315 2e7866fb3d84f8acaeaeb11275fed205 421 Pfam PF02441 Flavoprotein 11 183 6.8E-48 T 23-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CDG60_15315 2e7866fb3d84f8acaeaeb11275fed205 421 SUPERFAMILY SSF52507 6 186 7.33E-63 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDG60_15315 2e7866fb3d84f8acaeaeb11275fed205 421 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 9 410 2.1E-143 T 23-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CDG60_15315 2e7866fb3d84f8acaeaeb11275fed205 421 SUPERFAMILY SSF102645 198 416 8.5E-73 T 23-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 2.1E-17 T 23-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 SUPERFAMILY SSF50249 2 106 8.76E-33 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 3.2E-241 T 23-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.193 T 23-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 4.4E-108 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 Pfam PF02938 GAD domain 311 409 5.3E-29 T 23-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 Gene3D G3DSA:3.30.1360.30 275 423 2.3E-196 T 23-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 Gene3D G3DSA:3.30.930.10 120 582 2.3E-196 T 23-10-2018 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 Gene3D G3DSA:2.40.50.140 1 107 1.4E-33 T 23-10-2018 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 3.7E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 3.7E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 3.7E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 3.7E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 SUPERFAMILY SSF55261 293 422 5.56E-43 T 23-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CDG60_03850 6b0d1840ec0ff9a14f9282d00b51d8fb 595 SUPERFAMILY SSF55681 115 586 5.53E-103 T 23-10-2018 CDG60_02930 2b9776e9e269fb160d503e6d540f5cda 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG60_02930 2b9776e9e269fb160d503e6d540f5cda 613 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 565 5.2E-9 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG60_02930 2b9776e9e269fb160d503e6d540f5cda 613 Gene3D G3DSA:3.30.300.30 473 583 3.6E-15 T 23-10-2018 CDG60_02930 2b9776e9e269fb160d503e6d540f5cda 613 SUPERFAMILY SSF56801 45 577 2.35E-98 T 23-10-2018 CDG60_02930 2b9776e9e269fb160d503e6d540f5cda 613 Pfam PF00501 AMP-binding enzyme 51 477 2.5E-60 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG60_02930 2b9776e9e269fb160d503e6d540f5cda 613 Gene3D G3DSA:3.40.50.12780 35 470 2.8E-62 T 23-10-2018 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 Gene3D G3DSA:1.20.1270.10 523 601 1.5E-19 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 Gene3D G3DSA:3.90.640.10 228 315 3.1E-166 T 23-10-2018 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 SUPERFAMILY SSF53067 2 182 1.18E-65 T 23-10-2018 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 Pfam PF00012 Hsp70 protein 4 603 6.6E-259 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 SUPERFAMILY SSF100920 384 539 1.44E-58 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.6E-282 T 23-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 387 406 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 137 157 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 333 349 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 468 484 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 53 61 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 197 207 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 PRINTS PR00301 70kDa heat shock protein signature 364 384 5.6E-77 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 Gene3D G3DSA:3.30.420.40 5 378 3.1E-166 T 23-10-2018 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 SUPERFAMILY SSF100934 534 609 2.16E-8 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 SUPERFAMILY SSF53067 186 381 7.78E-68 T 23-10-2018 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 Gene3D G3DSA:3.30.420.40 179 365 3.1E-166 T 23-10-2018 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 Gene3D G3DSA:2.60.34.10 382 522 1.7E-63 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG60_17950 47d9720c5cfb12aab67e7445083c080c 647 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 642 35.993 T 23-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CDG60_15705 73eff29239729486b48e8f280d00a338 167 Pfam PF05382 Bacteriophage peptidoglycan hydrolase 68 136 1.7E-6 T 23-10-2018 IPR008044 Bacteriophage lysin MetaCyc: PWY-7883 CDG60_15705 73eff29239729486b48e8f280d00a338 167 Gene3D G3DSA:3.90.1720.10 49 166 8.4E-28 T 23-10-2018 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 SUPERFAMILY SSF50104 120 175 2.47E-15 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 9.0E-16 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 9.0E-16 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 9.0E-16 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 Gene3D G3DSA:2.30.30.30 118 175 1.7E-19 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 SMART SM00738 1 110 2.1E-44 T 23-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 176 22.884 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 Pfam PF02357 Transcription termination factor nusG 2 107 5.5E-28 T 23-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 SMART SM00739 122 149 0.0032 T 23-10-2018 IPR005824 KOW CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 SUPERFAMILY SSF82679 1 112 3.79E-38 T 23-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 Gene3D G3DSA:3.30.70.940 1 117 2.7E-46 T 23-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG60_02235 8499d6e57b2c195906182fa83c6a9de6 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 3.7E-63 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG60_14470 637e252c9f978a43ca4b007462dfc90b 150 SUPERFAMILY SSF55729 6 135 3.82E-33 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_14470 637e252c9f978a43ca4b007462dfc90b 150 Gene3D G3DSA:3.40.630.30 2 147 4.3E-40 T 23-10-2018 CDG60_14470 637e252c9f978a43ca4b007462dfc90b 150 Pfam PF00583 Acetyltransferase (GNAT) family 31 134 7.5E-19 T 23-10-2018 IPR000182 GNAT domain CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 Gene3D G3DSA:3.40.50.720 5 257 1.8E-100 T 23-10-2018 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 34.578 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 23-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 280 4.4E-60 T 23-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 SUPERFAMILY SSF53223 2 121 1.92E-37 T 23-10-2018 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 Gene3D G3DSA:3.40.50.10860 7 275 1.8E-100 T 23-10-2018 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 9.3E-38 T 23-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.8E-61 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 2.8E-61 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.8E-61 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 2.8E-61 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 2.8E-61 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.8E-61 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.8E-61 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG60_05820 8358f15f7a9cb7eb8fbfddc18f857779 282 SUPERFAMILY SSF51735 127 278 3.8E-44 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_02135 6797819f8e070337460e8bdf4a37bf6b 246 Pfam PF04397 LytTr DNA-binding domain 150 243 1.5E-20 T 23-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CDG60_02135 6797819f8e070337460e8bdf4a37bf6b 246 Pfam PF00072 Response regulator receiver domain 3 111 1.1E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_02135 6797819f8e070337460e8bdf4a37bf6b 246 SMART SM00448 1 111 4.3E-33 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_02135 6797819f8e070337460e8bdf4a37bf6b 246 Gene3D G3DSA:3.40.50.2300 1 132 6.3E-37 T 23-10-2018 CDG60_02135 6797819f8e070337460e8bdf4a37bf6b 246 SMART SM00850 147 244 1.3E-25 T 23-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CDG60_02135 6797819f8e070337460e8bdf4a37bf6b 246 SUPERFAMILY SSF52172 1 177 1.71E-36 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_02135 6797819f8e070337460e8bdf4a37bf6b 246 Gene3D G3DSA:2.40.50.40 138 206 1.1E-10 T 23-10-2018 CDG60_15845 25d38c000807b839403b0268520d7e81 85 Gene3D G3DSA:1.10.150.250 4 84 4.0E-21 T 23-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CDG60_15845 25d38c000807b839403b0268520d7e81 85 Pfam PF03937 Flavinator of succinate dehydrogenase 10 79 1.3E-19 T 23-10-2018 IPR005631 Flavinator of succinate dehydrogenase CDG60_15845 25d38c000807b839403b0268520d7e81 85 SUPERFAMILY SSF109910 7 81 2.35E-19 T 23-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CDG60_03640 5a49571ae10739eb49f92db52407c7a1 341 SUPERFAMILY SSF53098 180 326 8.35E-28 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_03640 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_03640 5a49571ae10739eb49f92db52407c7a1 341 Gene3D G3DSA:3.30.420.10 172 334 1.7E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_03640 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_01500 5a49571ae10739eb49f92db52407c7a1 341 SUPERFAMILY SSF53098 180 326 8.35E-28 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_01500 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_01500 5a49571ae10739eb49f92db52407c7a1 341 Gene3D G3DSA:3.30.420.10 172 334 1.7E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_01500 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_14270 5a49571ae10739eb49f92db52407c7a1 341 SUPERFAMILY SSF53098 180 326 8.35E-28 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_14270 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_14270 5a49571ae10739eb49f92db52407c7a1 341 Gene3D G3DSA:3.30.420.10 172 334 1.7E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_14270 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_14050 5a49571ae10739eb49f92db52407c7a1 341 SUPERFAMILY SSF53098 180 326 8.35E-28 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_14050 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_14050 5a49571ae10739eb49f92db52407c7a1 341 Gene3D G3DSA:3.30.420.10 172 334 1.7E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_14050 5a49571ae10739eb49f92db52407c7a1 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_08175 a341b2f3d66e506e77fa5bbebe3f407a 363 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 15 357 4.4E-150 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG60_08175 a341b2f3d66e506e77fa5bbebe3f407a 363 Gene3D G3DSA:3.20.20.70 11 359 1.5E-151 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_08175 a341b2f3d66e506e77fa5bbebe3f407a 363 PIRSF PIRSF001361 3 362 4.4E-157 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG60_08175 a341b2f3d66e506e77fa5bbebe3f407a 363 Pfam PF00793 DAHP synthetase I family 53 348 3.9E-94 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG60_08175 a341b2f3d66e506e77fa5bbebe3f407a 363 SUPERFAMILY SSF51569 16 357 8.7E-132 T 23-10-2018 CDG60_07100 9135654a26b5d5af553454f5e78f2d88 338 SUPERFAMILY SSF53850 18 335 4.99E-64 T 23-10-2018 CDG60_07100 9135654a26b5d5af553454f5e78f2d88 338 Pfam PF12849 PBP superfamily domain 19 305 2.7E-42 T 23-10-2018 IPR024370 PBP domain CDG60_07100 9135654a26b5d5af553454f5e78f2d88 338 Gene3D G3DSA:3.40.190.10 27 306 2.5E-53 T 23-10-2018 CDG60_07100 9135654a26b5d5af553454f5e78f2d88 338 Gene3D G3DSA:3.40.190.10 113 279 2.5E-53 T 23-10-2018 CDG60_09785 95136271cd1ef7bd4fc78ffef09207c0 68 SUPERFAMILY SSF46689 8 63 3.33E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_09785 95136271cd1ef7bd4fc78ffef09207c0 68 Gene3D G3DSA:1.10.10.60 2 65 9.6E-14 T 23-10-2018 CDG60_09785 95136271cd1ef7bd4fc78ffef09207c0 68 Pfam PF02954 Bacterial regulatory protein, Fis family 26 62 1.8E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_09785 95136271cd1ef7bd4fc78ffef09207c0 68 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 30 47 6.7E-8 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_09785 95136271cd1ef7bd4fc78ffef09207c0 68 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 47 67 6.7E-8 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 Gene3D G3DSA:3.40.50.300 324 465 1.4E-9 T 23-10-2018 CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 23 591 39.868 T 23-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 66 592 1.0E-122 T 23-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 Pfam PF13604 AAA domain 141 337 1.5E-31 T 23-10-2018 CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 SUPERFAMILY SSF52540 139 574 1.39E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 Gene3D G3DSA:3.40.50.300 105 323 2.7E-52 T 23-10-2018 CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 Pfam PF13538 UvrD-like helicase C-terminal domain 522 568 3.8E-14 T 23-10-2018 IPR027785 UvrD-like helicase C-terminal domain CDG60_02660 9a06713752312c94f204e9c9efd0e422 599 Gene3D G3DSA:3.40.50.300 469 583 5.0E-20 T 23-10-2018 CDG60_14390 f08183d1f84246625fda0c7fcc15a469 298 Gene3D G3DSA:1.10.10.10 2 66 1.6E-6 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14390 f08183d1f84246625fda0c7fcc15a469 298 Pfam PF13280 WYL domain 131 295 1.9E-26 T 23-10-2018 IPR026881 WYL domain CDG60_14390 f08183d1f84246625fda0c7fcc15a469 298 Pfam PF08279 HTH domain 13 54 7.0E-7 T 23-10-2018 IPR013196 Helix-turn-helix, type 11 CDG60_09865 b9696063c3a429b9c7a3e988f789519d 155 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 3.9E-27 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDG60_09865 b9696063c3a429b9c7a3e988f789519d 155 PIRSF PIRSF006181 1 155 5.6E-57 T 23-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDG60_09865 b9696063c3a429b9c7a3e988f789519d 155 SUPERFAMILY SSF55826 2 152 1.02E-45 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG60_09865 b9696063c3a429b9c7a3e988f789519d 155 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 2.5E-57 T 23-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDG60_09865 b9696063c3a429b9c7a3e988f789519d 155 Gene3D G3DSA:3.90.960.10 1 154 1.7E-58 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 SUPERFAMILY SSF56645 15 253 5.1E-87 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 390 4.6E-41 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 Gene3D G3DSA:1.20.140.10 249 390 1.5E-42 T 23-10-2018 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 130 9.2E-34 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 SUPERFAMILY SSF47203 241 390 1.51E-45 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 Gene3D G3DSA:2.40.110.10 133 248 6.0E-42 T 23-10-2018 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 Gene3D G3DSA:1.10.540.10 10 132 3.1E-36 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_15850 ae96a6fac173157ad136924935c0e446 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 230 3.0E-26 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 154 1.6E-21 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 PIRSF PIRSF006092 2 157 8.1E-40 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 Gene3D G3DSA:1.10.287.180 1 75 7.3E-27 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 25.594 T 23-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 Gene3D G3DSA:3.10.50.30 77 158 5.5E-29 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 72 4.7E-25 T 23-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 48.875 T 23-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 SUPERFAMILY SSF54534 80 155 1.31E-18 T 23-10-2018 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 156 1.8E-67 T 23-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CDG60_05940 45bf9bfcddcec72c1cd3b7a68eaaad68 159 SUPERFAMILY SSF46557 4 78 6.28E-25 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG60_03860 82f0a3570d73d0ea6eff017c4d29416e 702 Gene3D G3DSA:2.40.170.20 161 702 2.1E-61 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_03860 82f0a3570d73d0ea6eff017c4d29416e 702 Pfam PF00593 TonB dependent receptor 331 699 2.1E-39 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_03860 82f0a3570d73d0ea6eff017c4d29416e 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 148 1.7E-10 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_03860 82f0a3570d73d0ea6eff017c4d29416e 702 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 685 702 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG60_03860 82f0a3570d73d0ea6eff017c4d29416e 702 SUPERFAMILY SSF56935 38 702 1.01E-88 T 23-10-2018 CDG60_03860 82f0a3570d73d0ea6eff017c4d29416e 702 Gene3D G3DSA:2.170.130.10 38 159 2.1E-23 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_16775 2cac2e31b74503ff840d03a3261f93c8 267 Gene3D G3DSA:3.40.50.150 3 267 2.9E-71 T 23-10-2018 CDG60_16775 2cac2e31b74503ff840d03a3261f93c8 267 PIRSF PIRSF018249 1 267 5.3E-84 T 23-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CDG60_16775 2cac2e31b74503ff840d03a3261f93c8 267 Pfam PF08241 Methyltransferase domain 88 171 1.6E-11 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG60_16775 2cac2e31b74503ff840d03a3261f93c8 267 SUPERFAMILY SSF53335 6 234 1.86E-38 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_01085 1f51d025076ae049c4de976c1ffd5cec 360 SUPERFAMILY SSF53383 13 358 3.54E-114 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_01085 1f51d025076ae049c4de976c1ffd5cec 360 PIRSF PIRSF000390 1 360 1.4E-105 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG60_01085 1f51d025076ae049c4de976c1ffd5cec 360 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 357 8.7E-124 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG60_01085 1f51d025076ae049c4de976c1ffd5cec 360 Gene3D G3DSA:3.40.640.10 1 243 4.1E-95 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_01085 1f51d025076ae049c4de976c1ffd5cec 360 Gene3D G3DSA:3.90.1150.10 245 360 1.2E-33 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_00945 f530d717d0b8bb299f599862013f159b 391 SUPERFAMILY SSF51679 1 351 4.58E-93 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_00945 f530d717d0b8bb299f599862013f159b 391 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 351 1.5E-186 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CDG60_00945 f530d717d0b8bb299f599862013f159b 391 Pfam PF00296 Luciferase-like monooxygenase 1 327 6.2E-85 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG60_00945 f530d717d0b8bb299f599862013f159b 391 Gene3D G3DSA:3.20.20.30 1 363 2.6E-141 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_00945 f530d717d0b8bb299f599862013f159b 391 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 381 77.46 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CDG60_10715 55fb89bdee20f0372978e34658da4a04 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.561 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_10715 55fb89bdee20f0372978e34658da4a04 249 Gene3D G3DSA:3.30.70.980 130 204 8.3E-53 T 23-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_10715 55fb89bdee20f0372978e34658da4a04 249 Gene3D G3DSA:1.10.10.200 1 81 5.8E-33 T 23-10-2018 IPR017856 Integrase-like, N-terminal CDG60_10715 55fb89bdee20f0372978e34658da4a04 249 Gene3D G3DSA:3.30.70.980 85 236 8.3E-53 T 23-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_10715 55fb89bdee20f0372978e34658da4a04 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 5.5E-95 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_10715 55fb89bdee20f0372978e34658da4a04 249 SUPERFAMILY SSF75625 3 246 3.92E-91 T 23-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_10715 55fb89bdee20f0372978e34658da4a04 249 Pfam PF01709 Transcriptional regulator 5 237 2.8E-91 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 SUPERFAMILY SSF53098 4 138 2.15E-48 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 SUPERFAMILY SSF53098 217 391 3.9E-46 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 Gene3D G3DSA:3.30.420.10 1 155 5.5E-54 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 Gene3D G3DSA:3.30.420.10 220 396 1.3E-47 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 Pfam PF00075 RNase H 4 136 2.5E-41 T 23-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 226 406 9.7E-55 T 23-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 Hamap MF_00042 Ribonuclease H [rnhA]. 2 145 27.763 T 23-10-2018 IPR022892 Ribonuclease HI GO:0004523 CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 SMART SM00479 223 393 7.3E-37 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 Pfam PF00929 Exonuclease 225 382 9.9E-30 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_06045 4c78a292cce63c05fe86db8ecc6e41f6 449 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 223 440 1.1E-76 T 23-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_15075 4fd391c851b69e85cbdf66dc57383ad7 548 Gene3D G3DSA:3.40.50.12780 8 441 6.3E-110 T 23-10-2018 CDG60_15075 4fd391c851b69e85cbdf66dc57383ad7 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG60_15075 4fd391c851b69e85cbdf66dc57383ad7 548 Gene3D G3DSA:3.30.300.310 442 545 2.4E-34 T 23-10-2018 CDG60_15075 4fd391c851b69e85cbdf66dc57383ad7 548 SUPERFAMILY SSF56801 13 541 1.06E-144 T 23-10-2018 CDG60_15075 4fd391c851b69e85cbdf66dc57383ad7 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 7.9E-19 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG60_15075 4fd391c851b69e85cbdf66dc57383ad7 548 Pfam PF00501 AMP-binding enzyme 25 446 4.7E-98 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 5.2E-5 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 5.2E-5 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 5.2E-5 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 Pfam PF00958 GMP synthase C terminal domain 430 521 5.5E-40 T 23-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 Pfam PF02540 NAD synthase 217 292 1.4E-8 T 23-10-2018 IPR022310 NAD/GMP synthase CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 201 6.1E-79 T 23-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 Gene3D G3DSA:3.40.50.620 205 402 6.0E-76 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 SUPERFAMILY SSF52317 8 234 6.11E-58 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 Gene3D G3DSA:3.30.300.10 403 522 1.1E-48 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 Pfam PF00117 Glutamine amidotransferase class-I 14 195 1.1E-39 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 522 1.5E-145 T 23-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 Gene3D G3DSA:3.40.50.880 11 203 3.2E-53 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 3.5E-7 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 3.5E-7 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 3.5E-7 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 SUPERFAMILY SSF52402 194 417 6.17E-59 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 522 55.362 T 23-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00097 Anthranilate synthase component II signature 56 65 5.8E-6 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00097 Anthranilate synthase component II signature 83 94 5.8E-6 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 5.8E-6 T 23-10-2018 CDG60_01415 ccf6cc7e84a331505d1f87b2e8a3ef9f 522 SUPERFAMILY SSF54810 402 522 1.57E-47 T 23-10-2018 CDG60_04030 213586d4a8920c199f68028f033d9197 298 Pfam PF01039 Carboxyl transferase domain 112 257 2.8E-17 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDG60_04030 213586d4a8920c199f68028f033d9197 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 296 35.26 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_04030 213586d4a8920c199f68028f033d9197 298 Gene3D G3DSA:3.90.226.10 42 297 3.4E-74 T 23-10-2018 CDG60_04030 213586d4a8920c199f68028f033d9197 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 178 196 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_04030 213586d4a8920c199f68028f033d9197 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 215 232 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_04030 213586d4a8920c199f68028f033d9197 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 266 275 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_04030 213586d4a8920c199f68028f033d9197 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 244 255 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_04030 213586d4a8920c199f68028f033d9197 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 144 158 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_04030 213586d4a8920c199f68028f033d9197 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 42 296 1.2E-109 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_04030 213586d4a8920c199f68028f033d9197 298 SUPERFAMILY SSF52096 43 296 1.47E-76 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_00805 10769d8f807e54eb81fbc48cf5528a19 375 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 373 2.6E-131 T 23-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CDG60_00805 10769d8f807e54eb81fbc48cf5528a19 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 375 39.737 T 23-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CDG60_00805 10769d8f807e54eb81fbc48cf5528a19 375 Gene3D G3DSA:3.30.420.40 11 370 2.0E-123 T 23-10-2018 CDG60_00805 10769d8f807e54eb81fbc48cf5528a19 375 SUPERFAMILY SSF53067 4 346 1.66E-21 T 23-10-2018 CDG60_00805 10769d8f807e54eb81fbc48cf5528a19 375 Gene3D G3DSA:3.30.420.40 140 335 2.0E-123 T 23-10-2018 CDG60_03120 259f73783118577504f286a582ccb405 80 Gene3D G3DSA:1.10.10.1130 1 79 4.4E-29 T 23-10-2018 CDG60_03120 259f73783118577504f286a582ccb405 80 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 1.6E-29 T 23-10-2018 IPR021250 Protein of unknown function DUF2789 CDG60_14230 fad8f5fd309a3ff0245a59f72fbe00e4 454 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_14230 fad8f5fd309a3ff0245a59f72fbe00e4 454 SUPERFAMILY SSF103473 21 449 2.09E-68 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_14230 fad8f5fd309a3ff0245a59f72fbe00e4 454 Pfam PF07690 Major Facilitator Superfamily 69 379 2.0E-28 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_14230 fad8f5fd309a3ff0245a59f72fbe00e4 454 Gene3D G3DSA:1.20.1250.20 21 453 6.0E-75 T 23-10-2018 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Gene3D G3DSA:2.40.30.130 476 564 2.9E-10 T 23-10-2018 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 SMART SM00863 665 714 1.2E-20 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 SUPERFAMILY SSF55681 2 253 2.73E-105 T 23-10-2018 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 892 190.765 T 23-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Pfam PF02272 DHHA1 domain 752 889 2.2E-22 T 23-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 665 714 3.8E-17 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Pfam PF01411 tRNA synthetases class II (A) 5 565 7.6E-220 T 23-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 871 0.0 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 SUPERFAMILY SSF50447 466 564 1.0E-18 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Gene3D G3DSA:3.30.54.20 636 695 1.7E-49 T 23-10-2018 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Gene3D G3DSA:3.10.310.40 781 890 3.8E-24 T 23-10-2018 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 SUPERFAMILY SSF101353 254 477 7.32E-60 T 23-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 318 331 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 294 310 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Gene3D G3DSA:3.30.980.10 574 715 1.7E-49 T 23-10-2018 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 SUPERFAMILY SSF55186 565 725 4.32E-47 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDG60_11045 676a3d3f8c50790a00eb85e58de27644 892 Gene3D G3DSA:3.30.930.10 1 250 1.2E-118 T 23-10-2018 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 2.6E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 151 168 2.6E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 2.6E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 285 2.6E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 239 248 2.6E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 304 318 2.6E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 164 1.1E-40 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 1.5E-19 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 1.5E-19 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 1.5E-19 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 285 1.5E-19 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 20 325 39.767 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 21 323 1.7E-91 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 Gene3D G3DSA:3.40.50.1370 21 321 5.4E-90 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 SUPERFAMILY SSF53671 20 324 1.7E-92 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 173 321 9.5E-29 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CDG60_10890 3c4db88f734e28a6bbdaadcb2f3817cf 338 Gene3D G3DSA:3.40.50.1370 152 310 5.4E-90 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG60_10080 5d0140102c850cbb3e34f95f6ce4cdc5 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 23-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CDG60_10080 5d0140102c850cbb3e34f95f6ce4cdc5 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 3.2E-36 T 23-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CDG60_10080 5d0140102c850cbb3e34f95f6ce4cdc5 106 SUPERFAMILY SSF89360 1 95 3.73E-32 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG60_10080 5d0140102c850cbb3e34f95f6ce4cdc5 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 8.8E-23 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDG60_10080 5d0140102c850cbb3e34f95f6ce4cdc5 106 Gene3D G3DSA:2.60.300.12 1 106 4.6E-37 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG60_10080 5d0140102c850cbb3e34f95f6ce4cdc5 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 5.6E-52 T 23-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 Gene3D G3DSA:3.30.830.10 29 252 1.1E-56 T 23-10-2018 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 Gene3D G3DSA:3.30.830.10 481 717 2.3E-26 T 23-10-2018 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 SUPERFAMILY SSF63411 751 912 8.5E-30 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 65 88 - T 23-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 Gene3D G3DSA:3.30.830.10 281 458 7.2E-20 T 23-10-2018 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 SUPERFAMILY SSF63411 31 248 2.1E-50 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 Pfam PF05193 Peptidase M16 inactive domain 669 846 5.5E-28 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 Pfam PF05193 Peptidase M16 inactive domain 200 370 3.2E-16 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 SUPERFAMILY SSF63411 291 476 4.54E-14 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 Pfam PF00675 Insulinase (Peptidase family M16) 45 186 1.4E-15 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 Gene3D G3DSA:3.30.830.10 733 915 2.5E-38 T 23-10-2018 CDG60_11745 8e6623e9502702f2669a03dc53d166aa 926 SUPERFAMILY SSF63411 487 716 7.68E-29 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_16765 d94654129641e31538ec9b65588ff289 352 Gene3D G3DSA:3.30.420.40 13 349 9.3E-87 T 23-10-2018 CDG60_16765 d94654129641e31538ec9b65588ff289 352 SUPERFAMILY SSF53067 193 350 6.82E-25 T 23-10-2018 CDG60_16765 d94654129641e31538ec9b65588ff289 352 Pfam PF11104 Type IV pilus assembly protein PilM; 14 351 6.7E-135 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM CDG60_16765 d94654129641e31538ec9b65588ff289 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 351 9.7E-114 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM CDG60_16765 d94654129641e31538ec9b65588ff289 352 SUPERFAMILY SSF53067 13 177 2.82E-11 T 23-10-2018 CDG60_16765 d94654129641e31538ec9b65588ff289 352 Gene3D G3DSA:3.30.1490.300 88 147 9.3E-87 T 23-10-2018 CDG60_16765 d94654129641e31538ec9b65588ff289 352 Gene3D G3DSA:3.30.420.40 188 315 9.3E-87 T 23-10-2018 CDG60_16765 d94654129641e31538ec9b65588ff289 352 PIRSF PIRSF019169 2 352 6.2E-122 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM CDG60_16765 d94654129641e31538ec9b65588ff289 352 SMART SM00842 12 179 0.0061 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDG60_00625 04d7f08a707fc79b1d5a79177ebb467c 504 Gene3D G3DSA:1.20.1720.10 12 228 7.9E-40 T 23-10-2018 CDG60_00625 04d7f08a707fc79b1d5a79177ebb467c 504 Gene3D G3DSA:1.20.1250.20 260 436 1.2E-10 T 23-10-2018 CDG60_00625 04d7f08a707fc79b1d5a79177ebb467c 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 76 98 2.9E-6 T 23-10-2018 CDG60_00625 04d7f08a707fc79b1d5a79177ebb467c 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 163 187 2.9E-6 T 23-10-2018 CDG60_00625 04d7f08a707fc79b1d5a79177ebb467c 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 2.9E-6 T 23-10-2018 CDG60_00625 04d7f08a707fc79b1d5a79177ebb467c 504 Pfam PF07690 Major Facilitator Superfamily 18 409 2.8E-41 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_00625 04d7f08a707fc79b1d5a79177ebb467c 504 SUPERFAMILY SSF103473 7 497 9.55E-57 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_10125 b71abded04b9c223c2b5568e63c8ee30 169 TIGRFAM TIGR01935 NOT-MenG: RraA family 8 162 8.4E-62 T 23-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CDG60_10125 b71abded04b9c223c2b5568e63c8ee30 169 Gene3D G3DSA:3.50.30.40 3 168 3.7E-62 T 23-10-2018 CDG60_10125 b71abded04b9c223c2b5568e63c8ee30 169 SUPERFAMILY SSF89562 25 167 1.7E-46 T 23-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CDG60_10125 b71abded04b9c223c2b5568e63c8ee30 169 Pfam PF03737 Aldolase/RraA 7 161 1.3E-45 T 23-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CDG60_13630 46ceaf829e78c95358175ff6407e78cd 178 Gene3D G3DSA:2.30.30.40 34 153 4.7E-20 T 23-10-2018 CDG60_13630 46ceaf829e78c95358175ff6407e78cd 178 SMART SM00260 27 164 3.9E-6 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG60_13630 46ceaf829e78c95358175ff6407e78cd 178 Gene3D G3DSA:2.40.50.180 50 116 4.7E-20 T 23-10-2018 CDG60_13630 46ceaf829e78c95358175ff6407e78cd 178 SUPERFAMILY SSF50341 25 167 3.4E-28 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDG60_13630 46ceaf829e78c95358175ff6407e78cd 178 Pfam PF01584 CheW-like domain 33 154 2.3E-22 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 Gene3D G3DSA:3.90.190.20 324 480 2.5E-44 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 SUPERFAMILY SSF51984 22 109 5.36E-29 T 23-10-2018 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 416 2.0E-20 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 SUPERFAMILY SSF53623 108 325 1.7E-73 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 473 1.3E-166 T 23-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 Gene3D G3DSA:3.40.50.720 23 110 7.5E-32 T 23-10-2018 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 SUPERFAMILY SSF53244 326 475 5.31E-44 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 Gene3D G3DSA:3.40.1190.10 111 323 5.9E-82 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 Pfam PF01225 Mur ligase family, catalytic domain 24 122 1.5E-28 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 480 42.37 T 23-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17390 f5f7a2e89e4bca2ca37edc2806965113 482 Pfam PF08245 Mur ligase middle domain 127 307 3.8E-29 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG60_11785 07700fd77ddae126ec3d3b4ebf0c31dc 262 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 179 4.5E-47 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG60_11785 07700fd77ddae126ec3d3b4ebf0c31dc 262 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG60_11785 07700fd77ddae126ec3d3b4ebf0c31dc 262 SUPERFAMILY SSF55120 3 189 1.76E-34 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_11785 07700fd77ddae126ec3d3b4ebf0c31dc 262 Gene3D G3DSA:3.30.70.1560 67 167 6.8E-39 T 23-10-2018 CDG60_11785 07700fd77ddae126ec3d3b4ebf0c31dc 262 Pfam PF00849 RNA pseudouridylate synthase 3 147 1.2E-11 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_11785 07700fd77ddae126ec3d3b4ebf0c31dc 262 Gene3D G3DSA:3.30.70.580 1 66 4.8E-18 T 23-10-2018 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 PRINTS PR00315 GTP-binding elongation factor signature 135 144 5.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 PRINTS PR00315 GTP-binding elongation factor signature 15 28 5.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 PRINTS PR00315 GTP-binding elongation factor signature 99 110 5.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 PRINTS PR00315 GTP-binding elongation factor signature 83 93 5.0E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 SMART SM00838 407 492 0.0019 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Pfam PF00679 Elongation factor G C-terminus 408 493 2.5E-20 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Pfam PF03144 Elongation factor Tu domain 2 214 284 2.2E-10 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Gene3D G3DSA:3.40.50.300 8 194 2.2E-69 T 23-10-2018 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 SUPERFAMILY SSF54980 301 379 1.22E-17 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 SUPERFAMILY SSF54980 408 502 5.76E-25 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 SUPERFAMILY SSF52540 6 235 7.75E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 290.798 T 23-10-2018 IPR006297 Elongation factor 4 GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 182 6.5E-18 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Pfam PF06421 GTP-binding protein LepA C-terminus 496 602 1.8E-49 T 23-10-2018 IPR013842 GTP-binding protein LepA, C-terminal CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Gene3D G3DSA:3.30.70.870 295 376 6.7E-34 T 23-10-2018 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Gene3D G3DSA:3.30.70.2570 488 562 5.0E-32 T 23-10-2018 IPR038363 LepA, C-terminal domain superfamily CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 1.3E-51 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Gene3D G3DSA:3.30.70.3380 377 487 1.0E-38 T 23-10-2018 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 TIGRFAM TIGR01393 lepA: elongation factor 4 11 604 2.9E-288 T 23-10-2018 IPR006297 Elongation factor 4 GO:0005525 CDG60_06920 4f9a455343c067bb75a326a2ed4ee588 605 Gene3D G3DSA:2.40.30.10 195 294 3.8E-31 T 23-10-2018 CDG60_07360 b5789b54d8d5d63e2e96afc09c155943 334 Gene3D G3DSA:3.20.20.30 4 332 8.1E-98 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_07360 b5789b54d8d5d63e2e96afc09c155943 334 SUPERFAMILY SSF51679 8 329 1.18E-86 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_07360 b5789b54d8d5d63e2e96afc09c155943 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 6.3E-127 T 23-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 CDG60_07360 b5789b54d8d5d63e2e96afc09c155943 334 Pfam PF00296 Luciferase-like monooxygenase 24 296 2.5E-41 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG60_05725 f8d4af008c83388df24d10b50c9e5c63 205 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 109 143 3.8E-10 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_05725 f8d4af008c83388df24d10b50c9e5c63 205 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG60_05725 f8d4af008c83388df24d10b50c9e5c63 205 SUPERFAMILY SSF51161 64 201 6.38E-39 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_05725 f8d4af008c83388df24d10b50c9e5c63 205 Gene3D G3DSA:2.160.10.10 6 205 5.8E-58 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 SUPERFAMILY SSF55424 343 454 4.12E-23 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 Gene3D G3DSA:3.50.50.60 140 261 3.3E-71 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 Gene3D G3DSA:3.30.390.30 339 458 2.0E-34 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 SUPERFAMILY SSF51905 1 326 2.36E-32 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 317 7.7E-35 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 3.3E-36 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 Gene3D G3DSA:3.50.50.60 3 320 3.3E-71 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PIRSF PIRSF000350 1 457 9.2E-52 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 9.1E-12 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 9.1E-12 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 9.1E-12 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 9.1E-12 T 23-10-2018 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 448 2.6E-16 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG60_15405 ce4c4413c4f06b82c8161b956238b5ca 458 Gene3D G3DSA:1.10.287.990 33 101 3.3E-71 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 158 2.6E-15 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Gene3D G3DSA:1.20.140.10 289 466 3.3E-40 T 23-10-2018 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 SUPERFAMILY SSF47203 288 476 8.54E-46 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 6.4E-15 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Gene3D G3DSA:1.10.540.10 18 160 5.8E-19 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 594 1.8E-36 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Gene3D G3DSA:2.40.110.10 162 288 4.7E-29 T 23-10-2018 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 SUPERFAMILY SSF56645 41 280 9.42E-60 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 5.9E-18 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_03905 cbb916f927c56ab815d125a93991dbe5 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 1.8E-18 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 SUPERFAMILY SSF52343 206 336 4.45E-35 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 Pfam PF00970 Oxidoreductase FAD-binding domain 110 204 3.6E-23 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 4.3E-20 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 SUPERFAMILY SSF54292 4 88 3.28E-21 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 Gene3D G3DSA:3.10.20.30 1 100 9.1E-22 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 3.3E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 3.3E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 3.3E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 3.3E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 3.3E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 3.3E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 Gene3D G3DSA:2.40.30.10 101 201 4.5E-25 T 23-10-2018 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 Gene3D G3DSA:3.40.50.80 205 341 7.6E-33 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 SUPERFAMILY SSF63380 108 204 3.06E-24 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_11310 7c052c2d3629fbabc2109e7cc5dfeb41 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 6.1E-16 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG60_16700 69f2ea2d6789e612333816a943a8ba64 186 Gene3D G3DSA:3.10.310.50 34 182 7.4E-38 T 23-10-2018 CDG60_16700 69f2ea2d6789e612333816a943a8ba64 186 Pfam PF04536 TPM domain 40 158 2.8E-10 T 23-10-2018 IPR007621 TPM domain CDG60_11030 574d90648a123f485d237e60b67b2892 340 SMART SM00846 2 162 5.5E-74 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 SUPERFAMILY SSF51735 2 190 1.5E-51 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_11030 574d90648a123f485d237e60b67b2892 340 Gene3D G3DSA:3.40.50.720 3 334 3.9E-129 T 23-10-2018 CDG60_11030 574d90648a123f485d237e60b67b2892 340 PIRSF PIRSF000149 1 340 8.2E-118 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 334 6.6E-112 T 23-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 322 2.9E-51 T 23-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 SUPERFAMILY SSF55347 162 323 9.52E-57 T 23-10-2018 CDG60_11030 574d90648a123f485d237e60b67b2892 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 119 132 1.1E-27 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 1.1E-27 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 1.1E-27 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 183 199 1.1E-27 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 1.1E-27 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 1.4E-34 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 160 167 - T 23-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_11030 574d90648a123f485d237e60b67b2892 340 Gene3D G3DSA:3.30.360.10 161 324 3.9E-129 T 23-10-2018 CDG60_01250 27add4500120d323d120acb6ba6ebcec 410 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 263 378 4.9E-29 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDG60_01250 27add4500120d323d120acb6ba6ebcec 410 SUPERFAMILY SSF52540 8 326 2.76E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01250 27add4500120d323d120acb6ba6ebcec 410 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 216 4.8E-59 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDG60_01250 27add4500120d323d120acb6ba6ebcec 410 Gene3D G3DSA:3.40.50.300 9 236 2.3E-73 T 23-10-2018 CDG60_01250 27add4500120d323d120acb6ba6ebcec 410 SMART SM00833 263 378 9.4E-54 T 23-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDG60_10585 ed84e5355f5c41ced128c4eb8868a672 134 SUPERFAMILY SSF82784 15 132 1.06E-34 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG60_10585 ed84e5355f5c41ced128c4eb8868a672 134 Pfam PF02566 OsmC-like protein 36 131 1.5E-20 T 23-10-2018 IPR003718 OsmC/Ohr family CDG60_10585 ed84e5355f5c41ced128c4eb8868a672 134 Gene3D G3DSA:3.30.300.20 2 134 2.9E-37 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 484 8.2E-144 T 23-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 SUPERFAMILY SSF53623 99 331 9.03E-71 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 Gene3D G3DSA:3.40.1390.10 5 95 7.8E-9 T 23-10-2018 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 Gene3D G3DSA:3.90.190.20 340 497 1.2E-56 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 484 30.98 T 23-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 415 1.1E-18 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 SUPERFAMILY SSF63418 12 94 3.27E-9 T 23-10-2018 IPR035911 MurE/MurF, N-terminal CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 SUPERFAMILY SSF53244 333 484 6.15E-47 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 Gene3D G3DSA:3.40.1190.10 99 336 2.6E-73 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_16790 4bc4fb332b7dfee946a4c9a72407cfca 501 Pfam PF08245 Mur ligase middle domain 108 312 1.6E-50 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 12 142 7.1E-45 T 23-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 Gene3D G3DSA:3.30.700.10 35 143 3.3E-30 T 23-10-2018 CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 Pfam PF08334 Type II secretion system (T2SS), protein G 35 142 3.8E-34 T 23-10-2018 IPR013545 Type II secretion system protein G CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 3.7E-17 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 3.7E-17 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 SUPERFAMILY SSF54523 39 143 1.2E-25 T 23-10-2018 CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 2.4E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_02735 0aabdb57e0df91cf9a7c0061bf1117b1 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 1.7E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 SMART SM00861 357 527 5.7E-69 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 Pfam PF02779 Transketolase, pyrimidine binding domain 356 525 2.6E-47 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 Gene3D G3DSA:3.40.50.920 540 661 2.1E-36 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 SUPERFAMILY SSF52518 337 526 1.6E-66 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 Pfam PF02780 Transketolase, C-terminal domain 551 653 1.4E-10 T 23-10-2018 IPR033248 Transketolase, C-terminal domain CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 SUPERFAMILY SSF52922 534 661 1.33E-37 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 336 1.4E-162 T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 Gene3D G3DSA:3.40.50.970 6 328 1.1E-128 T 23-10-2018 CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 Gene3D G3DSA:3.40.50.970 329 539 4.7E-83 T 23-10-2018 CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 SUPERFAMILY SSF52518 6 332 1.29E-118 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 661 4.9E-292 T 23-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CDG60_10600 88e13090194e6bfc85fbc9b27522aac8 662 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 23-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_04865 0216f4839aa3dac7dccdcf51e86e5b8b 1149 Gene3D G3DSA:3.40.50.300 910 1147 2.6E-46 T 23-10-2018 CDG60_04865 0216f4839aa3dac7dccdcf51e86e5b8b 1149 Gene3D G3DSA:3.40.50.300 1 255 9.1E-53 T 23-10-2018 CDG60_04865 0216f4839aa3dac7dccdcf51e86e5b8b 1149 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1139 20.826 T 23-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CDG60_04865 0216f4839aa3dac7dccdcf51e86e5b8b 1149 PIRSF PIRSF005719 1 1144 6.2E-226 T 23-10-2018 IPR024704 Structural maintenance of chromosomes protein CDG60_04865 0216f4839aa3dac7dccdcf51e86e5b8b 1149 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1137 2.8E-269 T 23-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CDG60_04865 0216f4839aa3dac7dccdcf51e86e5b8b 1149 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1130 2.4E-54 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CDG60_04865 0216f4839aa3dac7dccdcf51e86e5b8b 1149 SUPERFAMILY SSF52540 1 1122 4.51E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 SUPERFAMILY SSF51735 22 192 7.38E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 196 334 2.8E-47 T 23-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 Gene3D G3DSA:3.40.50.720 11 203 9.1E-60 T 23-10-2018 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 204 225 - T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 21 338 33.222 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 PIRSF PIRSF000114 16 348 5.1E-103 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 23 173 3.8E-48 T 23-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 SUPERFAMILY SSF48179 195 347 1.11E-50 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 254 271 1.0E-37 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 75 102 1.0E-37 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 214 238 1.0E-37 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 189 213 1.0E-37 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 25 42 1.0E-37 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 149 169 1.0E-37 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG60_07765 c37611f38941d1f39ffbca4d5a84362f 357 Gene3D G3DSA:1.10.1040.10 205 351 4.4E-46 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 TIGRFAM TIGR00836 amt: ammonium transporter 69 459 3.0E-139 T 23-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 PRINTS PR00342 Rhesus blood group protein signature 259 277 8.0E-5 T 23-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 PRINTS PR00342 Rhesus blood group protein signature 164 180 8.0E-5 T 23-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 PRINTS PR00342 Rhesus blood group protein signature 345 363 8.0E-5 T 23-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 Pfam PF00909 Ammonium Transporter Family 71 460 1.2E-122 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 SUPERFAMILY SSF111352 65 443 6.15E-133 T 23-10-2018 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 ProSitePatterns PS01219 Ammonium transporters signature. 220 245 - T 23-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CDG60_01940 2ff2ee3bc85627828c5fdfd618a1bebf 462 Gene3D G3DSA:1.10.3430.10 47 462 8.2E-146 T 23-10-2018 IPR029020 Ammonium/urea transporter CDG60_11700 a2a7a1abd2840990d4daa3421d893b42 384 SMART SM00421 319 376 5.8E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_11700 a2a7a1abd2840990d4daa3421d893b42 384 Pfam PF00196 Bacterial regulatory proteins, luxR family 322 375 3.2E-6 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_11700 a2a7a1abd2840990d4daa3421d893b42 384 Gene3D G3DSA:1.10.10.10 322 380 1.9E-12 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_11700 a2a7a1abd2840990d4daa3421d893b42 384 SUPERFAMILY SSF46894 314 379 7.14E-14 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 4.7E-26 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 Gene3D G3DSA:2.40.50.140 4 68 1.9E-25 T 23-10-2018 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 SMART SM00357 6 69 3.2E-25 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 PRINTS PR00050 Cold shock protein signature 27 36 6.1E-15 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 PRINTS PR00050 Cold shock protein signature 7 22 6.1E-15 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 PRINTS PR00050 Cold shock protein signature 42 60 6.1E-15 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 PIRSF PIRSF002599 1 71 1.5E-21 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 SUPERFAMILY SSF50249 5 69 1.59E-22 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_08610 555129b36c5daec4042a2dda1cb71f8e 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 23-10-2018 IPR019844 Cold-shock conserved site CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Gene3D G3DSA:3.90.740.10 251 335 1.9E-8 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 SUPERFAMILY SSF50677 196 367 3.53E-53 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 944 0.0 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Gene3D G3DSA:3.90.740.10 208 250 7.9E-6 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 SUPERFAMILY SSF47323 654 912 4.3E-67 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 SUPERFAMILY SSF46589 897 961 1.62E-15 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Gene3D G3DSA:1.10.730.10 592 830 3.3E-69 T 23-10-2018 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 897 961 1.5E-19 T 23-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Gene3D G3DSA:3.40.50.620 337 566 4.5E-71 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Pfam PF08264 Anticodon-binding domain of tRNA 685 833 2.6E-39 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Gene3D G3DSA:1.10.287.380 890 962 6.2E-20 T 23-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 642 4.8E-209 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 PRINTS PR00986 Valyl-tRNA synthetase signature 374 387 3.0E-34 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 PRINTS PR00986 Valyl-tRNA synthetase signature 474 495 3.0E-34 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 PRINTS PR00986 Valyl-tRNA synthetase signature 511 529 3.0E-34 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 PRINTS PR00986 Valyl-tRNA synthetase signature 40 51 3.0E-34 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 PRINTS PR00986 Valyl-tRNA synthetase signature 242 259 3.0E-34 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 962 15.786 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 SUPERFAMILY SSF52374 8 652 2.82E-138 T 23-10-2018 CDG60_05210 3c71c78d57a00c093ad986675aed5ef3 964 Gene3D G3DSA:3.40.50.620 9 207 9.0E-68 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SUPERFAMILY SSF56672 522 921 5.56E-151 T 23-10-2018 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SUPERFAMILY SSF47807 166 280 3.59E-33 T 23-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Gene3D G3DSA:1.20.1060.10 540 653 2.1E-38 T 23-10-2018 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Gene3D G3DSA:3.40.50.1010 5 272 2.2E-91 T 23-10-2018 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Pfam PF00476 DNA polymerase family A 549 919 1.2E-150 T 23-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Gene3D G3DSA:3.30.420.10 324 538 4.8E-68 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SMART SM00475 1 256 2.5E-114 T 23-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 3.1E-28 T 23-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Gene3D G3DSA:3.30.70.370 659 917 2.4E-108 T 23-10-2018 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SMART SM00279 168 203 1.3E-14 T 23-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SMART SM00482 681 885 2.4E-99 T 23-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SUPERFAMILY SSF88723 1 165 6.17E-53 T 23-10-2018 IPR029060 PIN-like domain superfamily CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 ProSitePatterns PS00447 DNA polymerase family A signature. 749 768 - T 23-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 TIGRFAM TIGR00593 pola: DNA polymerase I 5 921 1.6E-290 T 23-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SUPERFAMILY SSF53098 330 515 3.8E-53 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 SMART SM00474 327 514 2.0E-38 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 1.0E-50 T 23-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Gene3D G3DSA:1.10.150.20 704 847 2.4E-108 T 23-10-2018 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 695 718 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 749 774 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 725 738 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 786 797 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 840 856 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 808 819 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 650 672 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 673 688 3.5E-74 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Pfam PF01612 3'-5' exonuclease 327 513 1.5E-36 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG60_14920 496520d3f24a6490ac172b72fa37613b 921 Gene3D G3DSA:1.10.150.20 169 241 2.2E-91 T 23-10-2018 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 Pfam PF00347 Ribosomal protein L6 11 82 1.1E-15 T 23-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 Pfam PF00347 Ribosomal protein L6 90 164 5.7E-18 T 23-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 PIRSF PIRSF002162 1 177 1.6E-43 T 23-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-32 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-32 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-32 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.511 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 Gene3D G3DSA:3.90.930.12 1 82 1.3E-27 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 Gene3D G3DSA:3.90.930.12 83 177 7.2E-38 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 SUPERFAMILY SSF56053 83 177 1.9E-34 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 SUPERFAMILY SSF56053 1 82 6.48E-23 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15915 0334078c3b7745acde886a0f04c7227b 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-72 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 SMART SM00387 423 535 9.2E-31 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 1.2E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 SMART SM00304 261 313 3.1E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 SUPERFAMILY SSF47384 297 379 2.55E-16 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 SUPERFAMILY SSF55874 368 533 4.19E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 5.6E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 5.6E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 5.6E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 5.6E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 SMART SM00388 314 379 3.6E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 533 2.2E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 Gene3D G3DSA:1.10.287.130 265 380 8.2E-25 T 23-10-2018 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 Gene3D G3DSA:3.30.565.10 384 536 1.3E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 SUPERFAMILY SSF158472 265 312 1.31E-7 T 23-10-2018 CDG60_05085 b9bcd171e08df2bc116f7c8c834212e5 542 Pfam PF00672 HAMP domain 266 310 2.5E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG60_14315 6a710b6b404d89cb618d9c01856bc0f1 120 Pfam PF04663 Phenol hydroxylase conserved region 16 78 4.1E-21 T 23-10-2018 IPR006756 Phenol hydroxylase KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDG60_14315 6a710b6b404d89cb618d9c01856bc0f1 120 Gene3D G3DSA:3.10.20.560 17 120 4.8E-37 T 23-10-2018 CDG60_10580 71ad64a05194709adf581fd78c75948f 201 SUPERFAMILY SSF101874 23 188 1.57E-53 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG60_10580 71ad64a05194709adf581fd78c75948f 201 Pfam PF04264 YceI-like domain 26 188 2.0E-43 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG60_10580 71ad64a05194709adf581fd78c75948f 201 Gene3D G3DSA:2.40.128.110 24 190 3.8E-53 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG60_10580 71ad64a05194709adf581fd78c75948f 201 SMART SM00867 25 189 2.3E-69 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG60_04320 febf004fce3130863131631ebfe9a988 797 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 164 192 - T 23-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CDG60_04320 febf004fce3130863131631ebfe9a988 797 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 408 429 - T 23-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CDG60_04320 febf004fce3130863131631ebfe9a988 797 Gene3D G3DSA:2.140.10.10 551 797 1.4E-39 T 23-10-2018 CDG60_04320 febf004fce3130863131631ebfe9a988 797 SMART SM00564 343 384 0.0049 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 SMART SM00564 217 248 4.9E-7 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 SMART SM00564 719 752 0.12 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 SMART SM00564 413 462 130.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 SMART SM00564 286 318 330.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 SUPERFAMILY SSF50998 161 796 1.02E-151 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG60_04320 febf004fce3130863131631ebfe9a988 797 Pfam PF01011 PQQ enzyme repeat 359 390 8.7E-5 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 Pfam PF01011 PQQ enzyme repeat 222 250 3.1E-5 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 Pfam PF01011 PQQ enzyme repeat 725 762 1.7E-6 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 Pfam PF01011 PQQ enzyme repeat 439 472 1.7E-5 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG60_04320 febf004fce3130863131631ebfe9a988 797 Gene3D G3DSA:2.140.10.10 159 543 2.7E-110 T 23-10-2018 CDG60_04320 febf004fce3130863131631ebfe9a988 797 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 13 796 0.0 T 23-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CDG60_03465 eb1db45bb42461eed03c3210687aecfa 382 Pfam PF00589 Phage integrase family 219 364 9.4E-13 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_03465 eb1db45bb42461eed03c3210687aecfa 382 Gene3D G3DSA:1.10.443.10 194 375 1.5E-18 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_03465 eb1db45bb42461eed03c3210687aecfa 382 SUPERFAMILY SSF56349 69 363 2.03E-27 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_13770 f3b91037b2fc4a59243ce035ebd52bd4 558 SUPERFAMILY SSF103473 27 449 2.35E-24 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_13770 f3b91037b2fc4a59243ce035ebd52bd4 558 Pfam PF07690 Major Facilitator Superfamily 44 439 3.4E-18 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_13770 f3b91037b2fc4a59243ce035ebd52bd4 558 Gene3D G3DSA:1.20.1250.20 33 228 3.0E-18 T 23-10-2018 CDG60_18105 cb5fea96cc2cc5a73f462880c4f2fc50 131 SUPERFAMILY SSF54211 7 119 5.06E-25 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_18105 cb5fea96cc2cc5a73f462880c4f2fc50 131 Pfam PF00825 Ribonuclease P 9 114 4.9E-24 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG60_18105 cb5fea96cc2cc5a73f462880c4f2fc50 131 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 23-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CDG60_18105 cb5fea96cc2cc5a73f462880c4f2fc50 131 Gene3D G3DSA:3.30.230.10 2 121 3.6E-36 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_18105 cb5fea96cc2cc5a73f462880c4f2fc50 131 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 12 117 4.6E-22 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG60_18105 cb5fea96cc2cc5a73f462880c4f2fc50 131 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 117 15.916 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG60_18105 cb5fea96cc2cc5a73f462880c4f2fc50 131 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 109 9.0E-42 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG60_14150 ace4fbf9ed579c8ab90cc39a133e294e 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 232 2.3E-53 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDG60_14150 ace4fbf9ed579c8ab90cc39a133e294e 233 SUPERFAMILY SSF56529 24 232 7.2E-66 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG60_14150 ace4fbf9ed579c8ab90cc39a133e294e 233 Gene3D G3DSA:3.90.850.10 3 233 4.7E-79 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 575 23.189 T 23-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 365 385 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 3 24 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 91 112 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 503 525 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 250 268 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 456 479 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 283 298 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR00701 60kDa inner membrane protein signature 539 562 7.5E-69 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 393 2.3E-104 T 23-10-2018 IPR028053 Membrane insertase YidC, N-terminal CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 394 573 2.0E-70 T 23-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR01900 YidC translocation/secretion protein signature 528 552 2.1E-24 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR01900 YidC translocation/secretion protein signature 509 524 2.1E-24 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 PRINTS PR01900 YidC translocation/secretion protein signature 380 396 2.1E-24 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 Pfam PF14849 YidC periplasmic domain 86 382 4.7E-71 T 23-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 Pfam PF02096 60Kd inner membrane protein 395 573 1.5E-60 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG60_18095 cee2c682fa6a8eba605c5bc0a756a870 585 Gene3D G3DSA:2.70.98.90 82 374 8.4E-97 T 23-10-2018 IPR038221 YidC, periplasmic domain superfamily CDG60_10605 916f1e6d393f720a1cd93e58666a3d8e 393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 383 7.9E-45 T 23-10-2018 IPR000160 GGDEF domain CDG60_10605 916f1e6d393f720a1cd93e58666a3d8e 393 SMART SM00267 213 385 2.2E-47 T 23-10-2018 IPR000160 GGDEF domain CDG60_10605 916f1e6d393f720a1cd93e58666a3d8e 393 Gene3D G3DSA:3.30.70.270 211 387 3.5E-48 T 23-10-2018 CDG60_10605 916f1e6d393f720a1cd93e58666a3d8e 393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 380 1.2E-41 T 23-10-2018 IPR000160 GGDEF domain CDG60_10605 916f1e6d393f720a1cd93e58666a3d8e 393 SUPERFAMILY SSF55073 229 385 5.96E-43 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 PIRSF PIRSF000167 1 450 1.9E-140 T 23-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 454 5.1E-127 T 23-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 Pfam PF06969 HemN C-terminal domain 365 425 3.8E-8 T 23-10-2018 IPR010723 HemN, C-terminal CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 Gene3D G3DSA:1.10.10.920 365 454 7.7E-18 T 23-10-2018 CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 SMART SM00729 51 272 2.7E-35 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 Pfam PF04055 Radical SAM superfamily 56 227 4.6E-15 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 Gene3D G3DSA:3.80.30.20 1 364 8.7E-104 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG60_16160 3f0cb0ea749cc4d08c27ac7e3e03fff7 454 SUPERFAMILY SSF102114 3 438 5.89E-117 T 23-10-2018 CDG60_05410 0b75bce448f97fa4f92ba753c080ae05 98 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 17 97 1.0E-32 T 23-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDG60_05410 0b75bce448f97fa4f92ba753c080ae05 98 Pfam PF01386 Ribosomal L25p family 6 95 1.2E-24 T 23-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDG60_05410 0b75bce448f97fa4f92ba753c080ae05 98 Gene3D G3DSA:2.40.240.10 3 98 1.0E-29 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_05410 0b75bce448f97fa4f92ba753c080ae05 98 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 98 24.615 T 23-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDG60_05410 0b75bce448f97fa4f92ba753c080ae05 98 SUPERFAMILY SSF50715 5 97 2.96E-26 T 23-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 SUPERFAMILY SSF109604 425 546 3.83E-13 T 23-10-2018 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 PIRSF PIRSF006288 8 884 0.0 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 SMART SM00471 453 600 1.0E-4 T 23-10-2018 IPR003607 HD/PDEase domain CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 Pfam PF01909 Nucleotidyltransferase domain 54 106 1.4E-5 T 23-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 SUPERFAMILY SSF81593 191 312 7.85E-8 T 23-10-2018 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 SUPERFAMILY SSF55021 809 867 1.37E-8 T 23-10-2018 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 Gene3D G3DSA:1.10.3210.10 444 577 8.4E-10 T 23-10-2018 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 30 877 1.7E-265 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 SUPERFAMILY SSF81301 37 166 8.05E-18 T 23-10-2018 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 Pfam PF01966 HD domain 491 585 1.9E-8 T 23-10-2018 IPR006674 HD domain CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 888 283.415 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDG60_10765 7d89ebfe800c04f749e7b8b0208b9c3f 888 Pfam PF08335 GlnD PII-uridylyltransferase 175 317 3.1E-36 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDG60_07010 f16d40bdc4ee1a8ff99c8874cbe5aa7a 471 SUPERFAMILY SSF55785 213 311 3.02E-7 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_07010 f16d40bdc4ee1a8ff99c8874cbe5aa7a 471 Pfam PF13188 PAS domain 157 242 0.03 T 23-10-2018 IPR000014 PAS domain CDG60_07010 f16d40bdc4ee1a8ff99c8874cbe5aa7a 471 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 313 465 4.7E-35 T 23-10-2018 IPR000160 GGDEF domain CDG60_07010 f16d40bdc4ee1a8ff99c8874cbe5aa7a 471 SMART SM00267 304 470 4.3E-42 T 23-10-2018 IPR000160 GGDEF domain CDG60_07010 f16d40bdc4ee1a8ff99c8874cbe5aa7a 471 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 463 9.8E-35 T 23-10-2018 IPR000160 GGDEF domain CDG60_07010 f16d40bdc4ee1a8ff99c8874cbe5aa7a 471 Gene3D G3DSA:3.30.70.270 302 468 2.8E-42 T 23-10-2018 CDG60_07010 f16d40bdc4ee1a8ff99c8874cbe5aa7a 471 SUPERFAMILY SSF55073 320 463 2.43E-33 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_16485 f38804971bcc1bff739ea0dd6c88a447 1397 Pfam PF05567 Neisseria PilC beta-propeller domain 846 1128 1.0E-10 T 23-10-2018 IPR008707 PilC beta-propeller domain CDG60_16485 f38804971bcc1bff739ea0dd6c88a447 1397 SUPERFAMILY SSF50998 1010 1171 3.45E-5 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 Gene3D G3DSA:2.40.100.10 20 183 6.1E-63 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 - T 23-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 PIRSF PIRSF001467 11 185 7.5E-30 T 23-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 25 180 8.8E-49 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 SUPERFAMILY SSF50891 21 182 1.14E-58 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 4.6E-13 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 53 4.6E-13 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_17920 863e02e80ddb663dd4c102b93f064b36 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 4.6E-13 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_17260 53842802fa3fbb3182075ed3594f580d 323 Gene3D G3DSA:3.30.70.100 210 304 5.4E-19 T 23-10-2018 CDG60_17260 53842802fa3fbb3182075ed3594f580d 323 SUPERFAMILY SSF82689 212 310 4.18E-21 T 23-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CDG60_17260 53842802fa3fbb3182075ed3594f580d 323 SUPERFAMILY SSF50182 143 206 2.68E-16 T 23-10-2018 IPR010920 LSM domain superfamily CDG60_17260 53842802fa3fbb3182075ed3594f580d 323 SUPERFAMILY SSF82861 56 142 2.75E-7 T 23-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CDG60_17260 53842802fa3fbb3182075ed3594f580d 323 Gene3D G3DSA:2.30.30.60 159 207 2.2E-15 T 23-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CDG60_17260 53842802fa3fbb3182075ed3594f580d 323 Pfam PF00924 Mechanosensitive ion channel 105 300 1.1E-43 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CDG60_08805 4ab4ac0a032957bf37f798928cbb686e 210 SUPERFAMILY SSF51306 65 207 1.48E-23 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_08805 4ab4ac0a032957bf37f798928cbb686e 210 Gene3D G3DSA:2.10.109.10 75 210 2.4E-36 T 23-10-2018 CDG60_08805 4ab4ac0a032957bf37f798928cbb686e 210 Pfam PF00717 Peptidase S24-like 105 150 1.8E-8 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 4.4E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 4.4E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 4.4E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 4.4E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 Pfam PF00557 Metallopeptidase family M24 15 245 3.5E-53 T 23-10-2018 IPR000994 Peptidase M24 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 Gene3D G3DSA:3.90.230.10 4 256 3.4E-105 T 23-10-2018 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 40.441 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 1.1E-97 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_10270 652b95f220ec50d4a4519df6b1aa5c07 264 SUPERFAMILY SSF55920 7 257 1.57E-90 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 Gene3D G3DSA:1.20.120.140 5 305 2.8E-122 T 23-10-2018 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 SUPERFAMILY SSF47446 298 432 1.57E-43 T 23-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 Pfam PF02978 Signal peptide binding domain 329 429 1.3E-30 T 23-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 Gene3D G3DSA:3.40.50.300 90 285 2.8E-122 T 23-10-2018 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.2E-22 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 SMART SM00963 1 86 8.0E-37 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 SUPERFAMILY SSF52540 42 350 1.1E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 Gene3D G3DSA:1.10.260.30 310 451 5.1E-37 T 23-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 SMART SM00382 99 247 6.1E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 SMART SM00962 100 296 1.6E-111 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 3.4E-73 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 5.9E-176 T 23-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CDG60_04830 225cee45c38c4ea8fbd4d14b2d768ac8 469 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 442 34.041 T 23-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.3E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 SUPERFAMILY SSF51735 6 252 4.28E-63 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.2E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 Gene3D G3DSA:3.40.50.720 1 254 6.1E-60 T 23-10-2018 CDG60_01625 ac9296d77e54afbc4a4c1af9ccc5c859 279 Pfam PF00106 short chain dehydrogenase 10 192 3.3E-47 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03025 5514cd462cc22e39e687d4579ed28a53 149 Pfam PF13673 Acetyltransferase (GNAT) domain 25 135 2.6E-17 T 23-10-2018 IPR000182 GNAT domain CDG60_03025 5514cd462cc22e39e687d4579ed28a53 149 Gene3D G3DSA:3.40.630.30 1 145 4.1E-31 T 23-10-2018 CDG60_03025 5514cd462cc22e39e687d4579ed28a53 149 SUPERFAMILY SSF55729 1 142 3.9E-23 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_03725 a6ce504b06748dff62a22073c2768afd 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 369 3.1E-172 T 23-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG60_03725 a6ce504b06748dff62a22073c2768afd 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 368 8.9E-164 T 23-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG60_03725 a6ce504b06748dff62a22073c2768afd 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 362 3.1E-92 T 23-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG60_03725 a6ce504b06748dff62a22073c2768afd 376 Gene3D G3DSA:3.20.20.105 1 368 1.5E-170 T 23-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG60_03725 a6ce504b06748dff62a22073c2768afd 376 SUPERFAMILY SSF51713 1 365 1.57E-161 T 23-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG60_03725 a6ce504b06748dff62a22073c2768afd 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 56.796 T 23-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 544 38.839 T 23-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 SUPERFAMILY SSF52374 3 385 1.24E-98 T 23-10-2018 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 532 8.1E-170 T 23-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 7.7E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 7.7E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 7.7E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 7.7E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 7.7E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 7.7E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 Gene3D G3DSA:2.40.50.140 577 685 5.1E-33 T 23-10-2018 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 Gene3D G3DSA:1.10.730.10 387 524 7.7E-33 T 23-10-2018 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 Gene3D G3DSA:3.40.50.620 4 382 1.0E-148 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 SUPERFAMILY SSF47323 384 597 3.92E-39 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 SUPERFAMILY SSF50249 583 684 5.39E-32 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 558 684 2.9E-41 T 23-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 SUPERFAMILY SSF57770 138 172 3.14E-12 T 23-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 Gene3D G3DSA:2.20.28.20 138 172 1.0E-148 T 23-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 Pfam PF01588 Putative tRNA binding domain 590 683 3.3E-24 T 23-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CDG60_13735 659c1682f88b8286f45cdfe6ce8b1419 685 Pfam PF09334 tRNA synthetases class I (M) 4 394 6.0E-151 T 23-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 225 2.6E-60 T 23-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 SUPERFAMILY SSF52374 17 171 7.11E-31 T 23-10-2018 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 SUPERFAMILY SSF82114 170 326 1.5E-31 T 23-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 Pfam PF01687 Riboflavin kinase 180 321 4.0E-25 T 23-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 Gene3D G3DSA:2.40.30.30 182 331 7.7E-24 T 23-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 Pfam PF06574 FAD synthetase 17 163 4.8E-47 T 23-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 SMART SM00904 179 326 2.2E-39 T 23-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CDG60_00915 c41437cbfbdad985e994022c298387cb 333 Gene3D G3DSA:3.40.50.620 6 181 1.3E-57 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_00915 c41437cbfbdad985e994022c298387cb 333 PIRSF PIRSF004491 1 332 1.4E-106 T 23-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDG60_11110 4e101dae519ac5b440d7da5b3cf33563 481 Gene3D G3DSA:1.10.860.10 23 187 1.8E-44 T 23-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDG60_11110 4e101dae519ac5b440d7da5b3cf33563 481 SUPERFAMILY SSF48024 29 141 1.44E-29 T 23-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 CDG60_11110 4e101dae519ac5b440d7da5b3cf33563 481 Gene3D G3DSA:3.40.50.300 188 475 1.6E-100 T 23-10-2018 CDG60_11110 4e101dae519ac5b440d7da5b3cf33563 481 SUPERFAMILY SSF52540 210 461 1.86E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11110 4e101dae519ac5b440d7da5b3cf33563 481 Pfam PF03796 DnaB-like helicase C terminal domain 212 468 1.4E-107 T 23-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CDG60_11110 4e101dae519ac5b440d7da5b3cf33563 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 31 470 1.7E-164 T 23-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CDG60_11110 4e101dae519ac5b440d7da5b3cf33563 481 Pfam PF00772 DnaB-like helicase N terminal domain 31 133 6.9E-29 T 23-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 SUPERFAMILY SSF56645 13 216 9.56E-39 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 SUPERFAMILY SSF47203 231 381 1.77E-19 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 Gene3D G3DSA:2.40.110.10 117 215 5.3E-25 T 23-10-2018 CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 113 1.4E-10 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 233 367 8.8E-17 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 Gene3D G3DSA:1.20.140.10 219 392 2.8E-48 T 23-10-2018 CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 Gene3D G3DSA:1.10.540.10 10 116 5.0E-27 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_17240 4320d3c91596ed0ed56b64907f0939a4 392 PIRSF PIRSF016578 2 389 2.2E-30 T 23-10-2018 CDG60_16380 a872cae424fa8aae9169359dbe216f58 295 SUPERFAMILY SSF103481 46 135 7.19E-5 T 23-10-2018 CDG60_16380 a872cae424fa8aae9169359dbe216f58 295 SUPERFAMILY SSF103481 182 279 2.35E-11 T 23-10-2018 CDG60_16380 a872cae424fa8aae9169359dbe216f58 295 Pfam PF00892 EamA-like transporter family 12 134 1.9E-7 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_16380 a872cae424fa8aae9169359dbe216f58 295 Pfam PF00892 EamA-like transporter family 147 276 1.3E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 SUPERFAMILY SSF50249 137 204 1.31E-14 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Gene3D G3DSA:2.40.50.140 140 203 5.2E-14 T 23-10-2018 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 27.631 T 23-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 SUPERFAMILY SSF69705 1 131 1.14E-32 T 23-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 SMART SM00316 138 203 1.7E-5 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Gene3D G3DSA:1.10.150.20 358 427 3.4E-16 T 23-10-2018 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Gene3D G3DSA:1.10.150.20 434 492 3.1E-21 T 23-10-2018 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Pfam PF08529 NusA N-terminal domain 4 128 1.4E-34 T 23-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 SUPERFAMILY SSF47794 360 420 5.97E-10 T 23-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Pfam PF14520 Helix-hairpin-helix domain 436 490 3.0E-10 T 23-10-2018 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 SUPERFAMILY SSF54814 284 345 3.66E-10 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 SUPERFAMILY SSF47794 427 493 8.79E-15 T 23-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 SUPERFAMILY SSF54814 206 283 9.81E-29 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 492 4.7E-14 T 23-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Gene3D G3DSA:3.30.300.20 283 351 1.0E-19 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Pfam PF13184 NusA-like KH domain 235 302 1.5E-27 T 23-10-2018 IPR025249 KH domain, NusA-like GO:0003723 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 9.9E-108 T 23-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Gene3D G3DSA:3.30.1480.10 1 133 1.6E-34 T 23-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CDG60_02540 19484c852e56ba20d437e5258bf63000 494 Gene3D G3DSA:3.30.300.20 204 282 4.4E-31 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 SUPERFAMILY SSF50447 262 393 2.36E-26 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.8E-47 T 23-10-2018 IPR032090 Peptide chain release factor 3, C-terminal CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 Gene3D G3DSA:3.40.50.300 72 379 5.5E-110 T 23-10-2018 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 Gene3D G3DSA:3.40.50.300 110 275 5.5E-110 T 23-10-2018 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 2.7E-259 T 23-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 SUPERFAMILY SSF52540 10 277 1.09E-82 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 161 8.2E-20 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 Gene3D G3DSA:3.30.70.3280 390 529 8.0E-53 T 23-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.2E-48 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.186 T 23-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.5E-7 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 SUPERFAMILY SSF54980 393 468 2.12E-17 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_03405 ca103f7e51901ce10472d25d73891e12 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_15015 29d34dca02d77fa8bb4fc2a12a1af9fa 419 Gene3D G3DSA:1.20.1250.20 11 403 1.0E-26 T 23-10-2018 CDG60_15015 29d34dca02d77fa8bb4fc2a12a1af9fa 419 SUPERFAMILY SSF103473 13 401 4.45E-34 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_15015 29d34dca02d77fa8bb4fc2a12a1af9fa 419 Pfam PF05977 Transmembrane secretion effector 7 399 6.0E-25 T 23-10-2018 IPR010290 Transmembrane secretion effector CDG60_07105 c49dfaf5100b718fa61a53668ab45fc2 459 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 165 454 2.6E-87 T 23-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CDG60_07105 c49dfaf5100b718fa61a53668ab45fc2 459 Gene3D G3DSA:1.10.3720.10 224 457 3.1E-38 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_07105 c49dfaf5100b718fa61a53668ab45fc2 459 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 180 1.7E-33 T 23-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 CDG60_07105 c49dfaf5100b718fa61a53668ab45fc2 459 SUPERFAMILY SSF161098 169 450 8.9E-37 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_07105 c49dfaf5100b718fa61a53668ab45fc2 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 455 1.1E-19 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_08210 af309d43931ee7d192519042c77f40e1 161 Pfam PF00583 Acetyltransferase (GNAT) family 49 137 1.2E-11 T 23-10-2018 IPR000182 GNAT domain CDG60_08210 af309d43931ee7d192519042c77f40e1 161 SUPERFAMILY SSF55729 1 161 7.5E-25 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_08210 af309d43931ee7d192519042c77f40e1 161 Gene3D G3DSA:3.40.630.30 1 161 1.3E-22 T 23-10-2018 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 Gene3D G3DSA:3.40.440.10 6 259 4.9E-98 T 23-10-2018 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 203.719 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 Gene3D G3DSA:3.90.170.10 268 439 1.6E-61 T 23-10-2018 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 SUPERFAMILY SSF52540 4 438 1.03E-167 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 SMART SM00788 4 432 3.0E-280 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 Pfam PF00709 Adenylosuccinate synthetase 5 431 1.5E-168 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 Gene3D G3DSA:1.10.300.10 102 202 4.9E-98 T 23-10-2018 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 437 2.2E-169 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG60_10980 9b567a80292a68dc33cc738d5406daa4 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:1.10.40.90 379 421 2.5E-20 T 23-10-2018 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1312 4.3E-77 T 23-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 1.5E-19 T 23-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 25 1362 0.0 T 23-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:2.40.50.100 953 1027 1.4E-26 T 23-10-2018 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 349 389 1.3E-7 T 23-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 490 8.4E-27 T 23-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:1.10.150.390 1312 1373 3.2E-27 T 23-10-2018 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:2.40.50.100 1028 1122 1.0E-20 T 23-10-2018 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 18 1373 19.059 T 23-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 494 649 1.5E-29 T 23-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:1.10.274.100 495 645 5.4E-42 T 23-10-2018 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 SMART SM00663 240 519 3.5E-177 T 23-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 21 347 1.3E-88 T 23-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:1.10.1790.20 1131 1310 1.8E-64 T 23-10-2018 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 SUPERFAMILY SSF64484 21 1361 0.0 T 23-10-2018 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:1.10.132.30 646 795 1.6E-66 T 23-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02265 24ca2b5926d1b9937272059d3929fb06 1400 Gene3D G3DSA:2.40.50.100 1147 1211 1.8E-64 T 23-10-2018 CDG60_00755 6b81f8354247cd6f36bc067102a0cfe7 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 351 1.2E-25 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CDG60_00755 6b81f8354247cd6f36bc067102a0cfe7 360 Gene3D G3DSA:3.40.50.300 6 329 7.4E-78 T 23-10-2018 CDG60_00755 6b81f8354247cd6f36bc067102a0cfe7 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 79.193 T 23-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CDG60_00755 6b81f8354247cd6f36bc067102a0cfe7 360 Gene3D G3DSA:1.20.1050.90 116 294 7.4E-78 T 23-10-2018 CDG60_00755 6b81f8354247cd6f36bc067102a0cfe7 360 SUPERFAMILY SSF52540 1 354 4.45E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00755 6b81f8354247cd6f36bc067102a0cfe7 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.9E-86 T 23-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CDG60_07985 c5813d7c095347d710f23e93a7ce1b00 297 Pfam PF03466 LysR substrate binding domain 89 293 6.6E-48 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_07985 c5813d7c095347d710f23e93a7ce1b00 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.2E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_07985 c5813d7c095347d710f23e93a7ce1b00 297 Gene3D G3DSA:1.10.10.10 1 87 9.3E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_07985 c5813d7c095347d710f23e93a7ce1b00 297 Gene3D G3DSA:3.40.190.10 162 265 1.0E-66 T 23-10-2018 CDG60_07985 c5813d7c095347d710f23e93a7ce1b00 297 SUPERFAMILY SSF53850 89 295 1.19E-46 T 23-10-2018 CDG60_07985 c5813d7c095347d710f23e93a7ce1b00 297 SUPERFAMILY SSF46785 1 111 8.39E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_07985 c5813d7c095347d710f23e93a7ce1b00 297 Gene3D G3DSA:3.40.190.10 90 290 1.0E-66 T 23-10-2018 CDG60_14410 96cb7bda222bcc2fec907327f323c338 305 Pfam PF00698 Acyl transferase domain 6 273 8.9E-16 T 23-10-2018 IPR014043 Acyl transferase CDG60_14410 96cb7bda222bcc2fec907327f323c338 305 SUPERFAMILY SSF52151 3 287 7.59E-36 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG60_14410 96cb7bda222bcc2fec907327f323c338 305 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 6.9E-10 T 23-10-2018 IPR020801 Polyketide synthase, acyl transferase domain CDG60_14410 96cb7bda222bcc2fec907327f323c338 305 Gene3D G3DSA:3.30.70.250 121 186 1.3E-49 T 23-10-2018 CDG60_14410 96cb7bda222bcc2fec907327f323c338 305 Gene3D G3DSA:3.40.366.10 4 274 1.3E-49 T 23-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CDG60_11950 0c4826dd8e69dda258343edd655214f8 189 Gene3D G3DSA:1.25.40.10 76 188 5.6E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_10445 9b465a4a880a315298e0d685606c5b1e 301 SUPERFAMILY SSF55120 84 295 2.7E-48 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_10445 9b465a4a880a315298e0d685606c5b1e 301 Gene3D G3DSA:3.30.2350.10 83 298 1.9E-44 T 23-10-2018 CDG60_10445 9b465a4a880a315298e0d685606c5b1e 301 Pfam PF00849 RNA pseudouridylate synthase 101 246 4.1E-24 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_10445 9b465a4a880a315298e0d685606c5b1e 301 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_07210 7ba821629b1db67d4394090aa8b3d2bd 309 Pfam PF03466 LysR substrate binding domain 90 295 2.0E-35 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_07210 7ba821629b1db67d4394090aa8b3d2bd 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.8E-21 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_07210 7ba821629b1db67d4394090aa8b3d2bd 309 SUPERFAMILY SSF53850 90 299 8.32E-37 T 23-10-2018 CDG60_07210 7ba821629b1db67d4394090aa8b3d2bd 309 Gene3D G3DSA:1.10.10.10 3 90 9.7E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_07210 7ba821629b1db67d4394090aa8b3d2bd 309 Gene3D G3DSA:3.40.190.290 92 297 1.3E-48 T 23-10-2018 CDG60_07210 7ba821629b1db67d4394090aa8b3d2bd 309 SUPERFAMILY SSF46785 5 89 1.01E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 SUPERFAMILY SSF50621 253 411 4.4E-51 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 Gene3D G3DSA:3.20.20.10 33 274 8.2E-148 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 1.9E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 1.9E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 1.9E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 1.9E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 411 40.722 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 56 74 - T 23-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 Gene3D G3DSA:2.40.37.10 16 407 8.2E-148 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 SUPERFAMILY SSF51419 25 281 1.83E-80 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 279 1.4E-74 T 23-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 1.4E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 1.4E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 1.4E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 1.4E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 1.4E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 410 1.3E-161 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 240 - T 23-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDG60_06460 c19661c0134f4f51d4bf9f0c7005e872 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 5.7E-22 T 23-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CDG60_04695 6927e4096e5700d4063b4fd16d7ba3f7 267 Pfam PF13622 Thioesterase-like superfamily 29 259 3.6E-24 T 23-10-2018 CDG60_04695 6927e4096e5700d4063b4fd16d7ba3f7 267 Gene3D G3DSA:3.10.129.90 19 252 4.0E-10 T 23-10-2018 CDG60_04695 6927e4096e5700d4063b4fd16d7ba3f7 267 SUPERFAMILY SSF54637 154 262 2.39E-7 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 95 2.1E-43 T 23-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.1E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.1E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.1E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 Gene3D G3DSA:4.10.520.10 2 97 2.0E-34 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 SMART SM00411 4 93 1.5E-37 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 Pfam PF00216 Bacterial DNA-binding protein 4 92 4.3E-30 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 SUPERFAMILY SSF47729 4 94 9.27E-31 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG60_14970 29057d3e791868ef4876a94a446c3b24 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.447 T 23-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CDG60_10830 dcffc3ad50565a2c1020abe17cfc5692 742 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 741 1.3E-282 T 23-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CDG60_10830 dcffc3ad50565a2c1020abe17cfc5692 742 Pfam PF05506 Domain of unknown function (DUF756) 548 635 5.4E-24 T 23-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CDG60_10830 dcffc3ad50565a2c1020abe17cfc5692 742 Pfam PF05506 Domain of unknown function (DUF756) 646 728 6.1E-17 T 23-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CDG60_10830 dcffc3ad50565a2c1020abe17cfc5692 742 Pfam PF04185 Phosphoesterase family 46 476 1.2E-104 T 23-10-2018 IPR007312 Phosphoesterase GO:0016788 CDG60_10830 dcffc3ad50565a2c1020abe17cfc5692 742 Gene3D G3DSA:3.40.720.10 314 525 7.3E-49 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_10830 dcffc3ad50565a2c1020abe17cfc5692 742 Gene3D G3DSA:3.40.720.10 35 205 3.5E-30 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_01315 5f5bfaf4ad188424430bff9855a08028 477 PIRSF PIRSF006446 3 463 5.9E-222 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG60_01315 5f5bfaf4ad188424430bff9855a08028 477 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 438 7.7E-171 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG60_14465 832101136a7487accda3f15f3053b9af 400 TIGRFAM TIGR00843 benE: benzoate transporter 17 390 4.8E-122 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG60_14465 832101136a7487accda3f15f3053b9af 400 Pfam PF03594 Benzoate membrane transport protein 18 389 1.1E-135 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 Pfam PF00005 ABC transporter 363 486 1.8E-12 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 SMART SM00382 30 362 2.0 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 SMART SM00382 369 522 4.8E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 SUPERFAMILY SSF52540 8 232 1.03E-32 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 Pfam PF00005 ABC transporter 22 178 2.6E-16 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 Gene3D G3DSA:3.40.50.300 1 261 2.8E-38 T 23-10-2018 CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 SUPERFAMILY SSF52540 349 520 6.22E-26 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09340 ab9078cbec853f6c82a0ec1f0aec6904 531 Gene3D G3DSA:3.40.50.300 340 527 7.2E-29 T 23-10-2018 CDG60_07025 1e556c40a175a611627f42309f43093f 202 PIRSF PIRSF036893 12 202 4.9E-58 T 23-10-2018 IPR022271 Lipocalin, ApoD type CDG60_07025 1e556c40a175a611627f42309f43093f 202 Pfam PF08212 Lipocalin-like domain 45 192 1.1E-49 T 23-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CDG60_07025 1e556c40a175a611627f42309f43093f 202 PRINTS PR01171 Bacterial lipocalin signature 181 191 5.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_07025 1e556c40a175a611627f42309f43093f 202 PRINTS PR01171 Bacterial lipocalin signature 45 59 5.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_07025 1e556c40a175a611627f42309f43093f 202 PRINTS PR01171 Bacterial lipocalin signature 154 165 5.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_07025 1e556c40a175a611627f42309f43093f 202 PRINTS PR01171 Bacterial lipocalin signature 82 91 5.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_07025 1e556c40a175a611627f42309f43093f 202 ProSitePatterns PS00213 Lipocalin signature. 46 57 - T 23-10-2018 IPR022272 Lipocalin family conserved site CDG60_07025 1e556c40a175a611627f42309f43093f 202 Gene3D G3DSA:2.40.128.20 27 193 8.9E-50 T 23-10-2018 IPR012674 Calycin CDG60_07025 1e556c40a175a611627f42309f43093f 202 SUPERFAMILY SSF50814 36 193 2.31E-42 T 23-10-2018 IPR012674 Calycin CDG60_17755 1bb22d023f20c34aac0971ec225f9d2b 234 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 136 1.1E-24 T 23-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CDG60_17755 1bb22d023f20c34aac0971ec225f9d2b 234 SUPERFAMILY SSF54534 40 234 2.13E-60 T 23-10-2018 CDG60_17755 1bb22d023f20c34aac0971ec225f9d2b 234 Gene3D G3DSA:1.10.287.460 39 95 3.3E-11 T 23-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CDG60_17755 1bb22d023f20c34aac0971ec225f9d2b 234 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 145 231 7.7E-31 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG60_17755 1bb22d023f20c34aac0971ec225f9d2b 234 Gene3D G3DSA:3.10.50.40 96 234 1.0E-58 T 23-10-2018 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 139 150 - T 23-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 Gene3D G3DSA:1.20.1440.90 278 394 2.6E-26 T 23-10-2018 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 896 18.355 T 23-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 721 747 6.1E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 250 265 6.1E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 589 618 6.1E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 191 207 6.1E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 391 411 6.1E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 547 567 6.1E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 138 151 6.1E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 Pfam PF00311 Phosphoenolpyruvate carboxylase 133 896 2.3E-277 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 549 561 - T 23-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG60_17795 c08684efb3e40f0454c3bc65e2aef47b 896 SUPERFAMILY SSF51621 6 896 2.04E-303 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG60_06670 7b7b194add9dcb39f9d9bc6b912cb971 135 SUPERFAMILY SSF54637 2 129 1.1E-37 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_06670 7b7b194add9dcb39f9d9bc6b912cb971 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 116 1.2E-27 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDG60_06670 7b7b194add9dcb39f9d9bc6b912cb971 135 PIRSF PIRSF003230 1 135 2.6E-52 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDG60_06670 7b7b194add9dcb39f9d9bc6b912cb971 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 126 1.6E-47 T 23-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CDG60_06670 7b7b194add9dcb39f9d9bc6b912cb971 135 Gene3D G3DSA:3.10.129.10 1 130 5.8E-41 T 23-10-2018 CDG60_06670 7b7b194add9dcb39f9d9bc6b912cb971 135 Pfam PF03061 Thioesterase superfamily 19 101 1.3E-15 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG60_10165 2959eee216e6bd71f6bc216fa02d91cb 141 Gene3D G3DSA:3.10.290.10 2 107 1.8E-36 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG60_10165 2959eee216e6bd71f6bc216fa02d91cb 141 SMART SM00363 8 71 1.7E-6 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_10165 2959eee216e6bd71f6bc216fa02d91cb 141 SUPERFAMILY SSF55174 7 102 1.31E-26 T 23-10-2018 CDG60_10165 2959eee216e6bd71f6bc216fa02d91cb 141 Pfam PF01479 S4 domain 9 53 4.2E-11 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_10165 2959eee216e6bd71f6bc216fa02d91cb 141 PIRSF PIRSF016821 5 130 5.9E-40 T 23-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 SUPERFAMILY SSF52540 441 642 1.16E-41 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 Pfam PF00270 DEAD/DEAH box helicase 265 422 3.4E-18 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 Gene3D G3DSA:3.40.50.300 198 439 1.7E-84 T 23-10-2018 CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 SMART SM00487 255 448 9.2E-31 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 SUPERFAMILY SSF50249 4 167 3.43E-31 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 652 1.0E-230 T 23-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 SMART SM00490 493 577 1.6E-20 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 Pfam PF17191 RecG wedge domain 6 163 2.8E-20 T 23-10-2018 IPR033454 RecG, wedge domain CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 Gene3D G3DSA:3.40.50.300 446 618 5.9E-54 T 23-10-2018 CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 Pfam PF00271 Helicase conserved C-terminal domain 461 576 2.5E-17 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 SUPERFAMILY SSF52540 204 442 1.99E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16085 b42f2bd9dbb01fc2665ef441393fc2ca 681 Gene3D G3DSA:2.40.50.140 40 133 8.2E-8 T 23-10-2018 CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Gene3D G3DSA:3.20.20.450 455 703 1.4E-69 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 SMART SM00267 266 438 1.3E-51 T 23-10-2018 IPR000160 GGDEF domain CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Gene3D G3DSA:3.30.450.20 30 137 2.4E-10 T 23-10-2018 CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Pfam PF08447 PAS fold 50 121 8.7E-6 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 SUPERFAMILY SSF55785 137 264 2.79E-10 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 SUPERFAMILY SSF55785 33 140 4.01E-8 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 SMART SM00052 443 695 9.5E-65 T 23-10-2018 IPR001633 EAL domain CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 SUPERFAMILY SSF141868 457 702 4.45E-66 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Pfam PF00990 Diguanylate cyclase, GGDEF domain 279 432 4.1E-41 T 23-10-2018 IPR000160 GGDEF domain CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 SUPERFAMILY SSF55073 282 440 6.04E-44 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 275 437 9.8E-37 T 23-10-2018 IPR000160 GGDEF domain CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Pfam PF00563 EAL domain 457 690 5.4E-57 T 23-10-2018 IPR001633 EAL domain CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Gene3D G3DSA:3.30.70.270 276 452 1.5E-48 T 23-10-2018 CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Pfam PF08448 PAS fold 158 267 1.5E-11 T 23-10-2018 IPR013656 PAS fold-4 CDG60_17690 f9d63612fae6c3452e5284df3faf5b07 703 Gene3D G3DSA:3.30.450.20 158 275 1.3E-11 T 23-10-2018 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 SUPERFAMILY SSF64484 11 1361 0.0 T 23-10-2018 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 3.5E-30 T 23-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 6.8E-40 T 23-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 153 224 1.1E-6 T 23-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 356 463 9.7E-14 T 23-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:2.40.50.150 842 962 3.5E-44 T 23-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:3.90.1110.10 160 274 4.7E-29 T 23-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 23-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:3.90.1100.10 657 722 2.3E-20 T 23-10-2018 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:2.40.270.10 800 841 5.3E-6 T 23-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.244 T 23-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1084 1096 - T 23-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:3.90.1800.10 1271 1324 7.8E-11 T 23-10-2018 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:2.40.270.10 1044 1261 4.9E-86 T 23-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:3.90.1100.10 18 159 1.2E-51 T 23-10-2018 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:3.90.1100.10 451 635 5.6E-69 T 23-10-2018 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 1.3E-21 T 23-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:2.40.50.100 723 797 9.7E-31 T 23-10-2018 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1283 9.9E-158 T 23-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 4.8E-26 T 23-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_02260 18ab67c279185dc4887317abbe05b679 1362 Gene3D G3DSA:3.90.1110.10 317 450 4.5E-32 T 23-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PIRSF PIRSF002133 1 124 4.9E-53 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.5E-68 T 23-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 4.7E-42 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Gene3D G3DSA:2.40.50.140 1 124 2.5E-62 T 23-10-2018 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.231 T 23-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04535 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 SUPERFAMILY SSF50249 3 123 6.85E-51 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 Pfam PF00072 Response regulator receiver domain 3 115 2.0E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.2E-19 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 SUPERFAMILY SSF52172 1 181 4.98E-29 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 SMART SM00421 149 206 4.1E-22 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 SMART SM00448 1 115 5.3E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 Gene3D G3DSA:3.40.50.12740 1 210 6.9E-54 T 23-10-2018 CDG60_17215 49e46ebf739d5bb40feafbffa0151afa 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 433 4.5E-196 T 23-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 Pfam PF00009 Elongation factor Tu GTP binding domain 24 226 4.0E-45 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 Gene3D G3DSA:3.40.50.300 1 239 1.3E-75 T 23-10-2018 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 212 1.0E-12 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 Gene3D G3DSA:2.40.30.10 241 327 1.8E-28 T 23-10-2018 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 Gene3D G3DSA:2.40.30.10 330 434 4.1E-34 T 23-10-2018 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 SUPERFAMILY SSF50465 333 433 4.12E-32 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 PRINTS PR00315 GTP-binding elongation factor signature 87 95 6.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 PRINTS PR00315 GTP-binding elongation factor signature 107 117 6.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 PRINTS PR00315 GTP-binding elongation factor signature 160 169 6.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 PRINTS PR00315 GTP-binding elongation factor signature 123 134 6.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 SUPERFAMILY SSF52540 16 235 2.29E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 SUPERFAMILY SSF50447 243 328 9.19E-24 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_13160 b4feb7a0c94319705ac1aab3c8668eb9 537 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 470 52.045 T 23-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 SUPERFAMILY SSF46689 419 467 9.32E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 Gene3D G3DSA:1.10.10.60 417 469 1.3E-5 T 23-10-2018 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 252 267 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 Gene3D G3DSA:3.30.450.20 29 142 9.2E-18 T 23-10-2018 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 32 141 2.1E-13 T 23-10-2018 IPR000014 PAS domain CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 SUPERFAMILY SSF55785 32 131 3.14E-13 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 SUPERFAMILY SSF52540 172 408 2.13E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 Pfam PF13426 PAS domain 40 136 9.8E-10 T 23-10-2018 IPR000014 PAS domain CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 378 387 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 189 202 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 SMART SM00382 185 329 5.8E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 SMART SM00091 29 96 0.0033 T 23-10-2018 IPR000014 PAS domain CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 Pfam PF00158 Sigma-54 interaction domain 169 332 7.5E-61 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 Gene3D G3DSA:1.10.8.60 338 416 5.4E-18 T 23-10-2018 CDG60_06725 b1494f3c57fa420e54580ef22d6dc72a 470 Gene3D G3DSA:3.40.50.300 149 337 1.9E-54 T 23-10-2018 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 SUPERFAMILY SSF53901 5 262 3.26E-72 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 8 390 8.1E-190 T 23-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 PIRSF PIRSF000429 3 390 4.0E-124 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 388 4.8E-130 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 SUPERFAMILY SSF53901 266 389 8.64E-43 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 Pfam PF00108 Thiolase, N-terminal domain 9 257 2.0E-73 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 Gene3D G3DSA:3.40.47.10 9 271 5.7E-142 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 Pfam PF02803 Thiolase, C-terminal domain 265 389 1.5E-47 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 Gene3D G3DSA:3.40.47.10 138 384 5.7E-142 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_02355 c32f66cc22738175c12ab3ada1e55dff 390 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 6 390 61.068 T 23-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CDG60_17510 11474c28fd84ee0acf7d47912946292c 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 182.225 T 23-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDG60_17510 11474c28fd84ee0acf7d47912946292c 525 Gene3D G3DSA:3.30.590.20 19 525 8.9E-176 T 23-10-2018 CDG60_17510 11474c28fd84ee0acf7d47912946292c 525 Pfam PF04262 Glutamate-cysteine ligase 17 388 2.7E-146 T 23-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDG60_17510 11474c28fd84ee0acf7d47912946292c 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 523 4.4E-161 T 23-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDG60_17510 11474c28fd84ee0acf7d47912946292c 525 SUPERFAMILY SSF55931 11 522 9.16E-177 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Pfam PF00512 His Kinase A (phospho-acceptor) domain 804 869 1.0E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Gene3D G3DSA:3.40.50.2300 1040 1158 4.4E-16 T 23-10-2018 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 SMART SM00448 1046 1155 4.5E-6 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Pfam PF00072 Response regulator receiver domain 1048 1153 7.8E-11 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 SUPERFAMILY SSF47384 792 869 6.67E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 SMART SM00387 913 1027 2.0E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_17205 c70a13b56738483f18f967c688d19630 1163 SUPERFAMILY SSF55785 644 764 1.44E-9 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Gene3D G3DSA:1.10.287.130 771 867 6.5E-12 T 23-10-2018 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 914 1024 1.2E-16 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_17205 c70a13b56738483f18f967c688d19630 1163 SUPERFAMILY SSF52172 1046 1156 1.39E-13 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Gene3D G3DSA:3.30.565.10 868 1028 1.4E-31 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_17205 c70a13b56738483f18f967c688d19630 1163 SMART SM00388 804 869 7.8E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Gene3D G3DSA:3.30.450.20 639 770 2.4E-12 T 23-10-2018 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 SUPERFAMILY SSF55874 860 1028 7.2E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_17205 c70a13b56738483f18f967c688d19630 1163 Pfam PF12860 PAS fold 657 770 1.3E-43 T 23-10-2018 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 966 5.9E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1024 5.9E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_17205 c70a13b56738483f18f967c688d19630 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1005 5.9E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03825 35bbd4d0714d8876a7a3358bf2dc5587 373 Gene3D G3DSA:3.40.640.10 1 248 7.2E-82 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_03825 35bbd4d0714d8876a7a3358bf2dc5587 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 366 4.9E-114 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG60_03825 35bbd4d0714d8876a7a3358bf2dc5587 373 SUPERFAMILY SSF53383 12 371 1.95E-105 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_03825 35bbd4d0714d8876a7a3358bf2dc5587 373 PIRSF PIRSF000390 1 373 1.4E-97 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG60_03825 35bbd4d0714d8876a7a3358bf2dc5587 373 Gene3D G3DSA:3.90.1150.10 250 373 2.8E-33 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_08315 b78dc54c28f58174451e26ab75237371 507 Pfam PF03471 Transporter associated domain 428 505 1.7E-13 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_08315 b78dc54c28f58174451e26ab75237371 507 SUPERFAMILY SSF54631 283 417 7.83E-20 T 23-10-2018 CDG60_08315 b78dc54c28f58174451e26ab75237371 507 Gene3D G3DSA:3.10.580.10 276 427 2.3E-38 T 23-10-2018 CDG60_08315 b78dc54c28f58174451e26ab75237371 507 Gene3D G3DSA:3.30.465.10 428 506 6.9E-12 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_08315 b78dc54c28f58174451e26ab75237371 507 SUPERFAMILY SSF56176 422 505 1.12E-13 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_08315 b78dc54c28f58174451e26ab75237371 507 Pfam PF03741 Integral membrane protein TerC family 14 204 5.4E-49 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDG60_08315 b78dc54c28f58174451e26ab75237371 507 SMART SM01091 427 507 9.9E-14 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_03975 db248bd7d8db8d6d4a6d9aeda6f7d468 636 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 57 - T 23-10-2018 IPR010916 TonB box, conserved site CDG60_03975 db248bd7d8db8d6d4a6d9aeda6f7d468 636 SUPERFAMILY SSF56935 50 635 1.45E-112 T 23-10-2018 CDG60_03975 db248bd7d8db8d6d4a6d9aeda6f7d468 636 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 170 1.8E-24 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_03975 db248bd7d8db8d6d4a6d9aeda6f7d468 636 Gene3D G3DSA:2.40.170.20 181 636 3.5E-78 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_03975 db248bd7d8db8d6d4a6d9aeda6f7d468 636 Pfam PF00593 TonB dependent receptor 244 635 2.1E-47 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_03975 db248bd7d8db8d6d4a6d9aeda6f7d468 636 Gene3D G3DSA:2.170.130.10 49 175 6.2E-34 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 398 1.1E-129 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 Pfam PF00202 Aminotransferase class-III 26 397 4.9E-102 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 16 401 68.055 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 PIRSF PIRSF000521 23 126 2.4E-10 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 PIRSF PIRSF000521 123 163 0.034 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 PIRSF PIRSF000521 174 401 9.6E-35 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 Gene3D G3DSA:3.40.640.10 60 308 6.4E-126 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 SUPERFAMILY SSF53383 14 399 4.78E-112 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_07215 b24a0288b480b49893f8148a028bbe83 403 Gene3D G3DSA:3.90.1150.10 25 391 6.4E-126 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_01660 5c4b1ae95f6e1aa2f5afd8e7f204e83e 294 Pfam PF00892 EamA-like transporter family 10 144 1.7E-24 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_01660 5c4b1ae95f6e1aa2f5afd8e7f204e83e 294 Pfam PF00892 EamA-like transporter family 159 289 8.0E-21 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_01660 5c4b1ae95f6e1aa2f5afd8e7f204e83e 294 SUPERFAMILY SSF103481 44 147 3.92E-14 T 23-10-2018 CDG60_01660 5c4b1ae95f6e1aa2f5afd8e7f204e83e 294 SUPERFAMILY SSF103481 196 291 7.06E-14 T 23-10-2018 CDG60_01000 162874b3e823de8649c595b10b4bb25c 215 Gene3D G3DSA:1.10.10.60 1 52 2.7E-25 T 23-10-2018 CDG60_01000 162874b3e823de8649c595b10b4bb25c 215 Gene3D G3DSA:1.10.357.10 53 215 1.8E-32 T 23-10-2018 CDG60_01000 162874b3e823de8649c595b10b4bb25c 215 SUPERFAMILY SSF46689 2 76 2.46E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_01000 162874b3e823de8649c595b10b4bb25c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 3.3E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_17285 46ce1a1d60e92e3c28f119061e322ef8 99 SUPERFAMILY SSF46785 3 96 1.86E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_17285 46ce1a1d60e92e3c28f119061e322ef8 99 Pfam PF12840 Helix-turn-helix domain 5 73 1.5E-12 T 23-10-2018 CDG60_17285 46ce1a1d60e92e3c28f119061e322ef8 99 SMART SM00418 5 97 4.6E-6 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_17285 46ce1a1d60e92e3c28f119061e322ef8 99 Gene3D G3DSA:1.10.10.10 2 99 3.5E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_01285 a04cda6a04e38ca004cdc708c9ae59e5 111 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 39 87 4.9E-13 T 23-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG60_01285 a04cda6a04e38ca004cdc708c9ae59e5 111 Pfam PF02627 Carboxymuconolactone decarboxylase family 22 105 1.2E-22 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG60_01285 a04cda6a04e38ca004cdc708c9ae59e5 111 SUPERFAMILY SSF69118 3 110 1.44E-30 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG60_01285 a04cda6a04e38ca004cdc708c9ae59e5 111 Gene3D G3DSA:1.20.1290.10 1 111 7.2E-37 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 164 1.9E-8 T 23-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 Hamap MF_00013 Octanoyltransferase [lipB]. 9 213 33.864 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 Gene3D G3DSA:3.30.930.10 8 208 3.0E-55 T 23-10-2018 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 133 5.0E-22 T 23-10-2018 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 PIRSF PIRSF016262 6 215 2.9E-58 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 206 3.6E-59 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 SUPERFAMILY SSF55681 15 200 1.91E-59 T 23-10-2018 CDG60_05335 6734586ebded98d5813d8fc79eff9977 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 76 91 - T 23-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDG60_00125 c157d96947322c956f0a10121a68ddaf 262 Gene3D G3DSA:3.30.460.10 4 120 5.4E-8 T 23-10-2018 CDG60_00125 c157d96947322c956f0a10121a68ddaf 262 Pfam PF13427 Domain of unknown function (DUF4111) 147 247 8.4E-19 T 23-10-2018 IPR025184 Domain of unknown function DUF4111 CDG60_00125 c157d96947322c956f0a10121a68ddaf 262 SUPERFAMILY SSF81301 9 112 5.82E-11 T 23-10-2018 CDG60_00125 c157d96947322c956f0a10121a68ddaf 262 Pfam PF01909 Nucleotidyltransferase domain 12 89 3.0E-6 T 23-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.58 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 23-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.1E-19 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.1E-19 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.1E-19 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 63 8.6E-25 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 SUPERFAMILY SSF143034 3 63 2.62E-21 T 23-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 Pfam PF01632 Ribosomal protein L35 3 60 1.6E-22 T 23-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15010 8b503ba3d59b30ba0e6f04d453aa00db 64 Gene3D G3DSA:2.40.50.530 4 63 8.7E-22 T 23-10-2018 CDG60_09320 b5e76b1af90e2960f6ea1c9481ea647c 392 SUPERFAMILY SSF103473 11 387 1.18E-60 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_09320 b5e76b1af90e2960f6ea1c9481ea647c 392 Gene3D G3DSA:1.20.1250.20 10 384 2.1E-55 T 23-10-2018 CDG60_09320 b5e76b1af90e2960f6ea1c9481ea647c 392 Pfam PF07690 Major Facilitator Superfamily 22 352 6.4E-49 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_09320 b5e76b1af90e2960f6ea1c9481ea647c 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_00955 5d85238d940a9fa2a9827fa41604edd9 324 Gene3D G3DSA:1.10.8.450 248 280 1.1E-104 T 23-10-2018 CDG60_00955 5d85238d940a9fa2a9827fa41604edd9 324 Gene3D G3DSA:3.40.190.10 117 216 1.1E-104 T 23-10-2018 CDG60_00955 5d85238d940a9fa2a9827fa41604edd9 324 SUPERFAMILY SSF53850 35 267 3.82E-48 T 23-10-2018 CDG60_00955 5d85238d940a9fa2a9827fa41604edd9 324 Pfam PF13379 NMT1-like family 32 258 3.0E-14 T 23-10-2018 CDG60_00955 5d85238d940a9fa2a9827fa41604edd9 324 SMART SM00062 37 253 2.7E-14 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG60_00955 5d85238d940a9fa2a9827fa41604edd9 324 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 49 319 2.7E-66 T 23-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CDG60_00955 5d85238d940a9fa2a9827fa41604edd9 324 Gene3D G3DSA:3.40.190.10 38 311 1.1E-104 T 23-10-2018 CDG60_01555 9c271845e1114126526216e4165e3def 291 Gene3D G3DSA:1.20.120.220 102 291 1.3E-58 T 23-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01555 9c271845e1114126526216e4165e3def 291 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 286 5.1E-40 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01555 9c271845e1114126526216e4165e3def 291 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 291 15.778 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01555 9c271845e1114126526216e4165e3def 291 SUPERFAMILY SSF81336 103 285 2.48E-42 T 23-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01555 9c271845e1114126526216e4165e3def 291 ProSitePatterns PS00449 ATP synthase a subunit signature. 227 236 - T 23-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01555 9c271845e1114126526216e4165e3def 291 Pfam PF00119 ATP synthase A chain 55 285 3.2E-56 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Gene3D G3DSA:3.30.230.10 225 337 1.4E-34 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 9 318 6.6E-95 T 23-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 SUPERFAMILY SSF55874 9 209 1.38E-50 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 SMART SM00853 458 602 4.8E-45 T 23-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Gene3D G3DSA:3.30.565.10 9 223 4.4E-65 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 146 6.1E-12 T 23-10-2018 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Pfam PF08676 MutL C terminal dimerisation domain 454 602 2.9E-43 T 23-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 SUPERFAMILY SSF118116 453 644 4.84E-56 T 23-10-2018 IPR037198 MutL, C-terminal domain superfamily CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 221 337 5.2E-35 T 23-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 SMART SM01340 220 338 4.8E-49 T 23-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Gene3D G3DSA:3.30.1370.100 502 597 3.7E-52 T 23-10-2018 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 8 642 26.836 T 23-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 SUPERFAMILY SSF54211 200 338 1.9E-32 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 Gene3D G3DSA:2.30.42.20 460 639 3.7E-52 T 23-10-2018 CDG60_10435 05a347dc2762377f22ccbf4e50411de2 646 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 100 106 - T 23-10-2018 IPR014762 DNA mismatch repair, conserved site CDG60_06790 f9761afc5c12b2f978751a8d4873371b 297 SUPERFAMILY SSF53850 93 291 4.34E-22 T 23-10-2018 CDG60_06790 f9761afc5c12b2f978751a8d4873371b 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 3 293 1.1E-105 T 23-10-2018 IPR017685 HTH-type transcriptional regulator ArgP CDG60_06790 f9761afc5c12b2f978751a8d4873371b 297 Gene3D G3DSA:3.40.190.290 88 295 7.4E-70 T 23-10-2018 CDG60_06790 f9761afc5c12b2f978751a8d4873371b 297 Pfam PF03466 LysR substrate binding domain 93 291 7.2E-15 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_06790 f9761afc5c12b2f978751a8d4873371b 297 Gene3D G3DSA:1.10.10.10 1 83 4.8E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06790 f9761afc5c12b2f978751a8d4873371b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06790 f9761afc5c12b2f978751a8d4873371b 297 SUPERFAMILY SSF46785 4 112 6.63E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_00325 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Gene3D G3DSA:3.20.20.70 2 212 9.6E-64 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_00325 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 SUPERFAMILY SSF51366 4 209 3.92E-56 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_00325 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 212 37.199 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG60_00325 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.3E-44 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG60_04630 44fb1251dba8c77bd2c3e2068533736d 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 9 149 3.6E-48 T 23-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CDG60_04630 44fb1251dba8c77bd2c3e2068533736d 150 Gene3D G3DSA:2.70.40.10 1 150 1.4E-53 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG60_04630 44fb1251dba8c77bd2c3e2068533736d 150 SUPERFAMILY SSF51283 3 149 1.1E-53 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG60_04630 44fb1251dba8c77bd2c3e2068533736d 150 Pfam PF00692 dUTPase 15 148 5.1E-38 T 23-10-2018 IPR029054 dUTPase-like CDG60_04630 44fb1251dba8c77bd2c3e2068533736d 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 149 32.956 T 23-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CDG60_10405 f8287e7c4e9e95a9759b36ce78fd64dc 229 Gene3D G3DSA:3.90.550.10 1 227 5.5E-56 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_10405 f8287e7c4e9e95a9759b36ce78fd64dc 229 SUPERFAMILY SSF53448 1 223 1.73E-54 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_10405 f8287e7c4e9e95a9759b36ce78fd64dc 229 Pfam PF00483 Nucleotidyl transferase 2 217 1.1E-18 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDG60_01895 4e126f9966fe47cda7f285d52f910e62 132 SUPERFAMILY SSF161084 7 129 1.2E-27 T 23-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CDG60_01895 4e126f9966fe47cda7f285d52f910e62 132 Pfam PF01124 MAPEG family 8 129 1.1E-23 T 23-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CDG60_01895 4e126f9966fe47cda7f285d52f910e62 132 Gene3D G3DSA:1.20.120.550 4 131 2.7E-17 T 23-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CDG60_06450 65ee2100dc204b63823e57a0f7ecec1e 465 Pfam PF00324 Amino acid permease 23 463 9.3E-104 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_06450 65ee2100dc204b63823e57a0f7ecec1e 465 PIRSF PIRSF006060 1 465 8.0E-69 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_06450 65ee2100dc204b63823e57a0f7ecec1e 465 Gene3D G3DSA:1.20.1740.10 13 465 1.1E-62 T 23-10-2018 CDG60_06450 65ee2100dc204b63823e57a0f7ecec1e 465 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 3.5E-63 T 23-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 Pfam PF13710 ACT domain 13 73 1.5E-16 T 23-10-2018 CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 Gene3D G3DSA:3.30.70.1150 83 163 1.4E-29 T 23-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 2.6E-27 T 23-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 Gene3D G3DSA:3.30.70.260 1 78 5.2E-34 T 23-10-2018 CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 SUPERFAMILY SSF55021 79 161 1.07E-26 T 23-10-2018 CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 SUPERFAMILY SSF55021 1 76 2.98E-22 T 23-10-2018 CDG60_15205 1d12ce4473c6b20f939a6cf63b71c393 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 8.0E-37 T 23-10-2018 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 852 3.5E-275 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 SUPERFAMILY SSF52374 11 659 3.68E-137 T 23-10-2018 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 SUPERFAMILY SSF50677 213 415 1.26E-50 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 Gene3D G3DSA:1.10.730.20 652 936 1.2E-87 T 23-10-2018 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 413 428 3.9E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 3.9E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 573 582 3.9E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 539 552 3.9E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 3.9E-32 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 649 3.5E-204 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 SUPERFAMILY SSF47323 664 933 8.04E-73 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 Pfam PF06827 Zinc finger found in FPG and IleRS 906 933 6.1E-6 T 23-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 937 21.008 T 23-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 Gene3D G3DSA:3.90.740.10 204 420 2.6E-231 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 Pfam PF08264 Anticodon-binding domain of tRNA 697 852 1.4E-26 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDG60_00910 ed6dbaebcb4acbf6e87996c123f8fbf6 947 Gene3D G3DSA:3.40.50.620 34 641 2.6E-231 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_06220 43bdac0cdc4912c870e1823b98ab4cb7 477 Gene3D G3DSA:1.20.1740.10 19 476 1.4E-60 T 23-10-2018 CDG60_06220 43bdac0cdc4912c870e1823b98ab4cb7 477 PIRSF PIRSF006060 5 477 3.2E-69 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_06220 43bdac0cdc4912c870e1823b98ab4cb7 477 Pfam PF00324 Amino acid permease 28 446 7.8E-107 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_16000 66eccfc8070af303be45f71238f7127c 245 SUPERFAMILY SSF52317 37 203 3.34E-43 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_16000 66eccfc8070af303be45f71238f7127c 245 Pfam PF00117 Glutamine amidotransferase class-I 53 193 5.3E-17 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG60_16000 66eccfc8070af303be45f71238f7127c 245 Gene3D G3DSA:3.40.50.880 5 242 1.2E-52 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_06780 aecd541dc5f757059b66f3a41b896d92 132 Pfam PF12893 Putative lumazine-binding 5 119 8.2E-30 T 23-10-2018 IPR039437 Putative lumazine-binding CDG60_06780 aecd541dc5f757059b66f3a41b896d92 132 Gene3D G3DSA:3.10.450.50 2 122 9.2E-24 T 23-10-2018 CDG60_06780 aecd541dc5f757059b66f3a41b896d92 132 SUPERFAMILY SSF54427 3 120 5.75E-31 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_17460 fc1ec5e81c6ae3c35a751a472929f8c3 123 SUPERFAMILY SSF69754 1 95 8.63E-11 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG60_17460 fc1ec5e81c6ae3c35a751a472929f8c3 123 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 4.6E-8 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDG60_17460 fc1ec5e81c6ae3c35a751a472929f8c3 123 Gene3D G3DSA:3.30.160.100 1 103 1.8E-5 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 Pfam PF13365 Trypsin-like peptidase domain 86 219 6.7E-33 T 23-10-2018 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 Gene3D G3DSA:2.30.42.10 365 460 2.1E-17 T 23-10-2018 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 Gene3D G3DSA:2.30.42.10 253 357 1.8E-27 T 23-10-2018 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 Gene3D G3DSA:2.40.10.120 27 251 8.5E-75 T 23-10-2018 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 PRINTS PR00834 HtrA/DegQ protease family signature 156 180 3.4E-46 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 PRINTS PR00834 HtrA/DegQ protease family signature 190 207 3.4E-46 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 PRINTS PR00834 HtrA/DegQ protease family signature 116 136 3.4E-46 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 PRINTS PR00834 HtrA/DegQ protease family signature 95 107 3.4E-46 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 3.4E-46 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 3.4E-46 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 SUPERFAMILY SSF50156 369 456 1.18E-15 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 SMART SM00228 258 340 2.8E-12 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 SMART SM00228 369 449 1.6E-9 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 453 5.9E-138 T 23-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 SUPERFAMILY SSF50494 10 267 1.11E-61 T 23-10-2018 IPR009003 Peptidase S1, PA clan CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 Pfam PF13180 PDZ domain 259 349 1.0E-16 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 Pfam PF13180 PDZ domain 369 452 4.3E-12 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_06910 c128ea986dfaf701d6f4f4964201726c 460 SUPERFAMILY SSF50156 239 348 1.07E-21 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 23-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 SUPERFAMILY SSF55021 417 511 4.58E-24 T 23-10-2018 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 Gene3D G3DSA:3.40.1020.10 336 512 1.9E-63 T 23-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 511 9.6E-216 T 23-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 Gene3D G3DSA:3.40.50.1100 14 325 2.0E-127 T 23-10-2018 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 Gene3D G3DSA:3.40.50.1100 50 146 2.0E-127 T 23-10-2018 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 314 4.8E-75 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG60_08415 63218e551a502d3b57488bfe913194e1 512 SUPERFAMILY SSF53686 6 363 5.11E-96 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG60_08415 63218e551a502d3b57488bfe913194e1 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 511 1.3E-22 T 23-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG60_08415 63218e551a502d3b57488bfe913194e1 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 416 1.8E-22 T 23-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG60_15930 7ccc499444775f4959c736b94c9a511d 178 Pfam PF00281 Ribosomal protein L5 24 80 1.2E-27 T 23-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15930 7ccc499444775f4959c736b94c9a511d 178 PIRSF PIRSF002161 1 178 1.1E-66 T 23-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15930 7ccc499444775f4959c736b94c9a511d 178 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15930 7ccc499444775f4959c736b94c9a511d 178 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 42.373 T 23-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15930 7ccc499444775f4959c736b94c9a511d 178 Gene3D G3DSA:3.30.1440.10 1 178 2.9E-79 T 23-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15930 7ccc499444775f4959c736b94c9a511d 178 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.5E-43 T 23-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15930 7ccc499444775f4959c736b94c9a511d 178 SUPERFAMILY SSF55282 3 178 1.55E-77 T 23-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_16780 e3a1618d3ce4f7a72effbd7440601fc7 372 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 370 23.078 T 23-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16780 e3a1618d3ce4f7a72effbd7440601fc7 372 Pfam PF00953 Glycosyl transferase family 4 99 296 4.2E-32 T 23-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CDG60_16780 e3a1618d3ce4f7a72effbd7440601fc7 372 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16780 e3a1618d3ce4f7a72effbd7440601fc7 372 ProSitePatterns PS01348 MraY family signature 2. 201 212 - T 23-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16780 e3a1618d3ce4f7a72effbd7440601fc7 372 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 40 372 1.4E-122 T 23-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_06560 6235a89475bd896db641702c953a5a5e 227 SUPERFAMILY SSF52540 5 225 1.69E-68 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06560 6235a89475bd896db641702c953a5a5e 227 Gene3D G3DSA:3.40.50.300 3 226 5.1E-66 T 23-10-2018 CDG60_06560 6235a89475bd896db641702c953a5a5e 227 Pfam PF00005 ABC transporter 26 174 1.3E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_06560 6235a89475bd896db641702c953a5a5e 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_06560 6235a89475bd896db641702c953a5a5e 227 SMART SM00382 34 226 2.2E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_00990 708fb2ba5624b506b4c30e37e52f4390 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 37.062 T 23-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CDG60_00990 708fb2ba5624b506b4c30e37e52f4390 238 Gene3D G3DSA:3.40.50.150 10 235 5.1E-76 T 23-10-2018 CDG60_00990 708fb2ba5624b506b4c30e37e52f4390 238 Pfam PF13489 Methyltransferase domain 49 202 1.9E-25 T 23-10-2018 CDG60_00990 708fb2ba5624b506b4c30e37e52f4390 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 10 229 8.2E-87 T 23-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CDG60_00990 708fb2ba5624b506b4c30e37e52f4390 238 SUPERFAMILY SSF53335 14 232 4.18E-51 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_06585 b047a320af2734709c2c64c35174cb8c 210 Gene3D G3DSA:3.40.50.170 1 206 2.6E-78 T 23-10-2018 CDG60_06585 b047a320af2734709c2c64c35174cb8c 210 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 184 31.089 T 23-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CDG60_06585 b047a320af2734709c2c64c35174cb8c 210 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 186 3.4E-70 T 23-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CDG60_06585 b047a320af2734709c2c64c35174cb8c 210 SUPERFAMILY SSF53328 2 196 5.89E-65 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_06585 b047a320af2734709c2c64c35174cb8c 210 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 130 153 - T 23-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_06585 b047a320af2734709c2c64c35174cb8c 210 Pfam PF00551 Formyl transferase 3 178 5.1E-58 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 SMART SM00155 180 207 2.8E-4 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 SMART SM00155 430 457 5.5E-5 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 Gene3D G3DSA:3.30.870.10 80 263 7.8E-35 T 23-10-2018 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 Gene3D G3DSA:3.30.870.10 294 517 6.1E-38 T 23-10-2018 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 Pfam PF13091 PLD-like domain 91 239 2.0E-18 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 Pfam PF13091 PLD-like domain 328 483 6.3E-23 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 SUPERFAMILY SSF56024 74 262 3.14E-42 T 23-10-2018 CDG60_04240 9190a29c5336a84b738d35eb1302f487 540 SUPERFAMILY SSF56024 327 492 1.84E-29 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.3E-6 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.3E-6 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.3E-6 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 Gene3D G3DSA:3.50.50.100 3 408 1.2E-105 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 337 5.2E-52 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 SUPERFAMILY SSF51905 164 350 1.71E-22 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 5.5E-12 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 5.5E-12 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 5.5E-12 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.5E-12 T 23-10-2018 CDG60_11825 212f3dad3800f505a0d15726c45fa34d 428 SUPERFAMILY SSF51905 6 192 6.01E-25 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 Gene3D G3DSA:1.10.357.10 60 203 5.5E-44 T 23-10-2018 CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 SUPERFAMILY SSF46689 4 80 1.69E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 Pfam PF08362 YcdC-like protein, C-terminal region 60 203 7.2E-52 T 23-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 SUPERFAMILY SSF48498 77 203 1.78E-34 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.3E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.3E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.3E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_00930 66445de6bd104f1c763e32b1b1b6cd3f 206 Gene3D G3DSA:1.10.10.60 1 59 1.7E-18 T 23-10-2018 CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 Pfam PF01022 Bacterial regulatory protein, arsR family 12 53 9.6E-15 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 6.1E-21 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 6.1E-21 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 6.1E-21 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 6.1E-21 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 SUPERFAMILY SSF46785 4 85 2.66E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 Gene3D G3DSA:1.10.10.10 1 91 6.5E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 SMART SM00418 5 83 3.0E-29 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_12050 dcc0c3040541556a74bcc16595daf2d4 107 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 23-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 SUPERFAMILY SSF51182 25 188 2.49E-11 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 5.5E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 5.5E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 Pfam PF02311 AraC-like ligand binding domain 25 96 2.0E-4 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 SUPERFAMILY SSF46689 219 256 2.99E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 Gene3D G3DSA:2.60.120.10 7 86 3.8E-5 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 SMART SM00342 173 256 1.4E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 Gene3D G3DSA:1.10.10.60 156 260 1.5E-22 T 23-10-2018 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 Pfam PF12833 Helix-turn-helix domain 180 255 7.6E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_13325 ed9ad887b176e95879e034e7ca041c48 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 252 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG60_02715 25190b213c9a09bb10f6e2ef4b01c39d 291 SUPERFAMILY SSF64397 3 237 2.62E-62 T 23-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CDG60_02715 25190b213c9a09bb10f6e2ef4b01c39d 291 Pfam PF01430 Hsp33 protein 5 278 1.7E-72 T 23-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CDG60_02715 25190b213c9a09bb10f6e2ef4b01c39d 291 Gene3D G3DSA:1.10.287.480 183 230 1.7E-18 T 23-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CDG60_02715 25190b213c9a09bb10f6e2ef4b01c39d 291 SUPERFAMILY SSF118352 231 287 4.32E-13 T 23-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CDG60_02715 25190b213c9a09bb10f6e2ef4b01c39d 291 Gene3D G3DSA:3.55.30.10 1 175 6.7E-52 T 23-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CDG60_02715 25190b213c9a09bb10f6e2ef4b01c39d 291 PIRSF PIRSF005261 1 289 3.4E-68 T 23-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CDG60_02715 25190b213c9a09bb10f6e2ef4b01c39d 291 Gene3D G3DSA:3.90.1280.10 231 288 2.2E-16 T 23-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CDG60_16220 e5af0ddbe30fd38d3a180929941961b7 381 SUPERFAMILY SSF53756 5 374 5.42E-111 T 23-10-2018 CDG60_16220 e5af0ddbe30fd38d3a180929941961b7 381 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 7 374 7.0E-129 T 23-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CDG60_16220 e5af0ddbe30fd38d3a180929941961b7 381 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 373 7.7E-107 T 23-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CDG60_16220 e5af0ddbe30fd38d3a180929941961b7 381 Gene3D G3DSA:3.40.50.2000 196 361 1.5E-130 T 23-10-2018 CDG60_16220 e5af0ddbe30fd38d3a180929941961b7 381 Gene3D G3DSA:3.40.50.2000 10 372 1.5E-130 T 23-10-2018 CDG60_02795 84eb34964e561730767f8977cd48361b 214 Gene3D G3DSA:3.60.15.10 2 210 4.7E-74 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_02795 84eb34964e561730767f8977cd48361b 214 SUPERFAMILY SSF56281 3 209 4.32E-55 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_02795 84eb34964e561730767f8977cd48361b 214 Pfam PF00753 Metallo-beta-lactamase superfamily 10 193 9.8E-30 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_02795 84eb34964e561730767f8977cd48361b 214 SMART SM00849 13 193 4.7E-40 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_15185 b699bf27fe40f5e6ac4d0ad595833e82 428 Pfam PF13439 Glycosyltransferase Family 4 60 228 6.5E-26 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDG60_15185 b699bf27fe40f5e6ac4d0ad595833e82 428 SUPERFAMILY SSF53756 48 417 4.19E-72 T 23-10-2018 CDG60_15185 b699bf27fe40f5e6ac4d0ad595833e82 428 Gene3D G3DSA:3.40.50.2000 51 224 8.1E-65 T 23-10-2018 CDG60_15185 b699bf27fe40f5e6ac4d0ad595833e82 428 Pfam PF00534 Glycosyl transferases group 1 236 392 2.5E-32 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG60_15185 b699bf27fe40f5e6ac4d0ad595833e82 428 Gene3D G3DSA:3.40.50.2000 225 401 8.1E-65 T 23-10-2018 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 Pfam PF00366 Ribosomal protein S17 11 78 4.2E-32 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.204 T 23-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 Gene3D G3DSA:2.40.50.140 2 84 4.7E-36 T 23-10-2018 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 23-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.4E-12 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.4E-12 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.4E-12 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 SUPERFAMILY SSF50249 7 83 1.63E-32 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 4.0E-33 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15945 eaf72ad0932a5cd4645361a2a62de90b 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 1.1E-36 T 23-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 23-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.894 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 SUPERFAMILY SSF52943 2 289 7.46E-92 T 23-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 Gene3D G3DSA:3.40.1380.10 61 208 5.5E-102 T 23-10-2018 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 Pfam PF00231 ATP synthase 3 288 5.5E-93 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 Gene3D G3DSA:1.10.287.80 6 285 5.5E-102 T 23-10-2018 CDG60_01580 3083afc871fc5ba171c0b181db0a0337 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 1.5E-104 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_03920 9c765274fae051b75da6163462486ade 553 SMART SM00304 278 330 2.0E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG60_03920 9c765274fae051b75da6163462486ade 553 SMART SM00388 331 395 2.1E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_03920 9c765274fae051b75da6163462486ade 553 SMART SM00387 439 551 2.6E-30 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_03920 9c765274fae051b75da6163462486ade 553 SUPERFAMILY SSF158472 280 323 1.22E-7 T 23-10-2018 CDG60_03920 9c765274fae051b75da6163462486ade 553 Pfam PF00512 His Kinase A (phospho-acceptor) domain 332 394 1.4E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_03920 9c765274fae051b75da6163462486ade 553 Gene3D G3DSA:3.30.565.10 407 553 3.6E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_03920 9c765274fae051b75da6163462486ade 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 1.0E-5 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03920 9c765274fae051b75da6163462486ade 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 490 1.0E-5 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03920 9c765274fae051b75da6163462486ade 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 504 1.0E-5 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03920 9c765274fae051b75da6163462486ade 553 SUPERFAMILY SSF47384 315 396 1.12E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_03920 9c765274fae051b75da6163462486ade 553 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 440 549 6.8E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_03920 9c765274fae051b75da6163462486ade 553 Gene3D G3DSA:1.20.1480.50 247 329 1.2E-10 T 23-10-2018 CDG60_03920 9c765274fae051b75da6163462486ade 553 Gene3D G3DSA:1.10.287.130 330 395 3.2E-12 T 23-10-2018 CDG60_03920 9c765274fae051b75da6163462486ade 553 SUPERFAMILY SSF55874 385 549 3.01E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_03920 9c765274fae051b75da6163462486ade 553 Pfam PF00672 HAMP domain 282 323 3.6E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG60_08835 2aaab3eb533a6f1d07b907379c2c36a2 410 Pfam PF13356 Arm DNA-binding domain 2 87 1.5E-19 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG60_08835 2aaab3eb533a6f1d07b907379c2c36a2 410 Pfam PF00589 Phage integrase family 234 385 4.2E-19 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_08835 2aaab3eb533a6f1d07b907379c2c36a2 410 Gene3D G3DSA:1.10.443.10 212 396 5.5E-21 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_08835 2aaab3eb533a6f1d07b907379c2c36a2 410 SUPERFAMILY SSF56349 97 395 8.24E-53 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_08835 2aaab3eb533a6f1d07b907379c2c36a2 410 Gene3D G3DSA:1.10.150.130 99 211 3.5E-17 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_08835 2aaab3eb533a6f1d07b907379c2c36a2 410 Gene3D G3DSA:3.30.160.390 1 98 4.0E-35 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG60_07900 0c0616b72dedc5dde20faa08e9625f79 556 SUPERFAMILY SSF51395 38 525 2.56E-132 T 23-10-2018 CDG60_07900 0c0616b72dedc5dde20faa08e9625f79 556 Gene3D G3DSA:3.20.20.70 116 528 8.4E-108 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_07900 0c0616b72dedc5dde20faa08e9625f79 556 PIRSF PIRSF500060 36 556 1.2E-230 T 23-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria CDG60_07900 0c0616b72dedc5dde20faa08e9625f79 556 PIRSF PIRSF006429 30 555 2.1E-161 T 23-10-2018 IPR024188 Glutamate synthase large subunit-like protein CDG60_07900 0c0616b72dedc5dde20faa08e9625f79 556 Pfam PF01645 Conserved region in glutamate synthase 179 497 1.4E-86 T 23-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 SMART SM00388 260 319 1.2E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 462 1.7E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 SMART SM00387 355 463 3.1E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 313 7.7E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.8E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.8E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.8E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 SMART SM00304 206 259 1.0E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 Gene3D G3DSA:3.30.565.10 322 471 1.6E-31 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 Gene3D G3DSA:1.10.287.130 203 314 5.5E-20 T 23-10-2018 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 Pfam PF00672 HAMP domain 206 251 5.7E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 SUPERFAMILY SSF55874 316 463 9.17E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_16915 1f47a1ef17aa32eeceaa67ad588d5daa 486 SUPERFAMILY SSF47384 244 317 1.59E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_13230 ca1a84b8fc625139660e81423eae5c4f 267 Pfam PF01694 Rhomboid family 64 219 1.5E-35 T 23-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CDG60_13230 ca1a84b8fc625139660e81423eae5c4f 267 Gene3D G3DSA:1.20.1540.10 12 226 4.1E-36 T 23-10-2018 IPR035952 Rhomboid-like superfamily CDG60_13230 ca1a84b8fc625139660e81423eae5c4f 267 SUPERFAMILY SSF144091 15 221 8.37E-39 T 23-10-2018 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 Gene3D G3DSA:1.10.10.1800 459 547 2.0E-21 T 23-10-2018 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 618 5.4E-271 T 23-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 Gene3D G3DSA:1.10.150.570 566 619 4.4E-22 T 23-10-2018 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 Pfam PF01134 Glucose inhibited division protein A 8 396 1.2E-164 T 23-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 SUPERFAMILY SSF51905 7 261 7.6E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 Pfam PF13932 GidA associated domain 402 612 8.8E-75 T 23-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 SMART SM01228 543 614 1.2E-42 T 23-10-2018 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 621 41.886 T 23-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 Gene3D G3DSA:3.50.50.60 2 231 5.8E-87 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 Gene3D G3DSA:3.50.50.60 301 458 2.7E-55 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_11175 c6ddf1e092899cbba3727c8a2dc10733 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CDG60_03660 c562f88e8a6c3e591498137d8e56602a 133 Gene3D G3DSA:3.30.460.10 22 132 6.8E-37 T 23-10-2018 CDG60_03660 c562f88e8a6c3e591498137d8e56602a 133 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 29 125 2.7E-36 T 23-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDG60_03660 c562f88e8a6c3e591498137d8e56602a 133 Pfam PF02410 Ribosomal silencing factor during starvation 31 125 3.1E-26 T 23-10-2018 CDG60_03660 c562f88e8a6c3e591498137d8e56602a 133 SUPERFAMILY SSF81301 24 129 9.16E-37 T 23-10-2018 CDG60_03660 c562f88e8a6c3e591498137d8e56602a 133 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 21 126 24.968 T 23-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 SUPERFAMILY SSF56059 83 344 8.84E-68 T 23-10-2018 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 SUPERFAMILY SSF52440 1 113 7.12E-48 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 1.6E-205 T 23-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 Gene3D G3DSA:3.40.50.20 1 85 6.7E-35 T 23-10-2018 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 SUPERFAMILY SSF51246 329 442 1.1E-40 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 Gene3D G3DSA:3.30.1490.20 131 201 2.0E-145 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 Gene3D G3DSA:3.30.470.20 87 430 2.0E-145 T 23-10-2018 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 320 1.4E-73 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 3.7E-37 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.5E-44 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG60_08880 f688e840f154fc649c9a1269e8102e19 456 SMART SM00878 334 440 4.2E-61 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG60_08035 84c31fce9a0daec6e09b73821f6c774d 501 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 420 440 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG60_08035 84c31fce9a0daec6e09b73821f6c774d 501 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 438 2.1E-118 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG60_08035 84c31fce9a0daec6e09b73821f6c774d 501 Pfam PF00474 Sodium:solute symporter family 35 438 1.7E-127 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG60_08035 84c31fce9a0daec6e09b73821f6c774d 501 Gene3D G3DSA:1.20.1730.10 23 500 1.4E-93 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily CDG60_08035 84c31fce9a0daec6e09b73821f6c774d 501 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 492 1.2E-218 T 23-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CDG60_08035 84c31fce9a0daec6e09b73821f6c774d 501 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG60_11055 039ebba6078774e9722d68478d2cc006 84 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 2.4E-29 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG60_11055 039ebba6078774e9722d68478d2cc006 84 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-20 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG60_11055 039ebba6078774e9722d68478d2cc006 84 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 64 17.498 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG60_11055 039ebba6078774e9722d68478d2cc006 84 SUPERFAMILY SSF117130 1 54 3.4E-20 T 23-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CDG60_11055 039ebba6078774e9722d68478d2cc006 84 Gene3D G3DSA:3.30.70.1680 1 59 1.2E-28 T 23-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CDG60_11055 039ebba6078774e9722d68478d2cc006 84 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 SUPERFAMILY SSF56925 30 194 7.32E-19 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 Gene3D G3DSA:2.40.160.20 13 189 7.1E-18 T 23-10-2018 CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 Pfam PF13505 Outer membrane protein beta-barrel domain 7 187 4.5E-13 T 23-10-2018 IPR027385 Outer membrane protein beta-barrel CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 PRINTS PR01021 OMPA domain signature 261 276 7.8E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 PRINTS PR01021 OMPA domain signature 231 253 7.8E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 PRINTS PR01021 OMPA domain signature 276 292 7.8E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 Gene3D G3DSA:3.30.1330.60 215 336 7.4E-44 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 SUPERFAMILY SSF103088 206 330 8.24E-34 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_04365 a3a9702aeb4e60970f594a30570c933f 347 Pfam PF00691 OmpA family 230 326 1.2E-22 T 23-10-2018 IPR006665 OmpA-like domain CDG60_08205 c8f5d910662d23bc9eac3149e6dde5ba 299 Gene3D G3DSA:1.10.10.10 3 88 1.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_08205 c8f5d910662d23bc9eac3149e6dde5ba 299 SUPERFAMILY SSF46785 3 106 3.93E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08205 c8f5d910662d23bc9eac3149e6dde5ba 299 SUPERFAMILY SSF53850 91 296 2.35E-35 T 23-10-2018 CDG60_08205 c8f5d910662d23bc9eac3149e6dde5ba 299 Pfam PF03466 LysR substrate binding domain 90 291 5.9E-33 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_08205 c8f5d910662d23bc9eac3149e6dde5ba 299 Gene3D G3DSA:3.40.190.290 91 293 1.3E-48 T 23-10-2018 CDG60_08205 c8f5d910662d23bc9eac3149e6dde5ba 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 SUPERFAMILY SSF141734 4 122 9.81E-47 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 SUPERFAMILY SSF101386 155 251 1.01E-21 T 23-10-2018 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 Gene3D G3DSA:3.10.20.400 2 97 8.8E-37 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 Gene3D G3DSA:1.10.287.1080 152 252 2.8E-26 T 23-10-2018 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 161 249 5.1E-13 T 23-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 31.474 T 23-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 251 33.579 T 23-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 153 246 19.403 T 23-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 156 246 5.4E-25 T 23-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 2.3E-32 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG60_02595 a34da1609388c208eb3e9959574a21d4 264 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 109 2.0E-24 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 SUPERFAMILY SSF47203 228 379 2.26E-43 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 Gene3D G3DSA:2.40.110.10 121 234 2.8E-40 T 23-10-2018 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 SUPERFAMILY SSF56645 4 241 2.36E-82 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 Gene3D G3DSA:1.20.140.10 235 380 6.5E-40 T 23-10-2018 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 PIRSF PIRSF016578 9 379 1.1E-16 T 23-10-2018 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 9.4E-24 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 3.7E-37 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 Gene3D G3DSA:1.10.540.10 2 120 1.9E-33 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_11920 4498eb9bd6fd8a0dcfa3af6b85e1d601 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 4.5E-32 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 23-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 4.4E-135 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 23-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 Pfam PF01979 Amidohydrolase family 11 310 4.8E-18 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 PIRSF PIRSF001237 1 344 6.0E-140 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 Gene3D G3DSA:3.20.20.140 2 343 4.1E-106 T 23-10-2018 CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 SUPERFAMILY SSF51556 2 342 6.01E-140 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_06240 9804f3708c85fab05bb9f0d986964f2f 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 44.749 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_03420 cf366b032be528c008b82cf746f086a7 273 SUPERFAMILY SSF51556 5 271 1.45E-66 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_03420 cf366b032be528c008b82cf746f086a7 273 PIRSF PIRSF005902 1 273 4.0E-56 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG60_03420 cf366b032be528c008b82cf746f086a7 273 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 23-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDG60_03420 cf366b032be528c008b82cf746f086a7 273 Pfam PF01026 TatD related DNase 6 269 5.7E-55 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG60_03420 cf366b032be528c008b82cf746f086a7 273 Gene3D G3DSA:3.20.20.140 1 272 1.1E-68 T 23-10-2018 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 1.9E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 1.9E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 SUPERFAMILY SSF48498 96 231 2.56E-32 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 97 227 9.8E-26 T 23-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Gene3D G3DSA:1.10.357.10 95 233 4.5E-30 T 23-10-2018 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 210 224 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 123 146 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 103 122 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 158 177 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 49 72 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 83 1.8E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Gene3D G3DSA:1.10.10.60 30 93 3.1E-25 T 23-10-2018 CDG60_00045 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 SUPERFAMILY SSF46689 31 91 9.98E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_06710 369f330d8a184666da7f67bb39528187 199 Pfam PF07499 RuvA, C-terminal domain 154 197 1.9E-11 T 23-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CDG60_06710 369f330d8a184666da7f67bb39528187 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 198 29.556 T 23-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CDG60_06710 369f330d8a184666da7f67bb39528187 199 Gene3D G3DSA:2.40.50.140 1 65 9.6E-23 T 23-10-2018 CDG60_06710 369f330d8a184666da7f67bb39528187 199 Gene3D G3DSA:1.10.150.20 66 137 7.9E-26 T 23-10-2018 CDG60_06710 369f330d8a184666da7f67bb39528187 199 Pfam PF14520 Helix-hairpin-helix domain 71 129 6.5E-19 T 23-10-2018 CDG60_06710 369f330d8a184666da7f67bb39528187 199 Pfam PF01330 RuvA N terminal domain 1 61 4.6E-19 T 23-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDG60_06710 369f330d8a184666da7f67bb39528187 199 SMART SM00278 72 91 0.52 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_06710 369f330d8a184666da7f67bb39528187 199 SMART SM00278 107 126 0.13 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_06710 369f330d8a184666da7f67bb39528187 199 Gene3D G3DSA:1.10.8.10 151 197 2.5E-12 T 23-10-2018 CDG60_06710 369f330d8a184666da7f67bb39528187 199 SUPERFAMILY SSF50249 1 62 4.23E-16 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_06710 369f330d8a184666da7f67bb39528187 199 SUPERFAMILY SSF47781 65 135 3.34E-21 T 23-10-2018 IPR010994 RuvA domain 2-like CDG60_06710 369f330d8a184666da7f67bb39528187 199 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 196 3.4E-54 T 23-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CDG60_06710 369f330d8a184666da7f67bb39528187 199 SUPERFAMILY SSF46929 152 197 1.7E-8 T 23-10-2018 IPR036267 RuvA, C-terminal domain superfamily CDG60_05625 455326c603adbc1e83b2f10ebcb1686b 570 SMART SM00244 28 197 5.7E-6 T 23-10-2018 IPR001107 Band 7 domain CDG60_05625 455326c603adbc1e83b2f10ebcb1686b 570 Pfam PF15975 Flotillin 427 551 8.5E-40 T 23-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 CDG60_05625 455326c603adbc1e83b2f10ebcb1686b 570 SUPERFAMILY SSF117892 59 186 1.31E-21 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily CDG60_05625 455326c603adbc1e83b2f10ebcb1686b 570 Pfam PF01145 SPFH domain / Band 7 family 41 186 5.6E-17 T 23-10-2018 IPR001107 Band 7 domain CDG60_05625 455326c603adbc1e83b2f10ebcb1686b 570 Gene3D G3DSA:3.30.479.30 68 187 5.0E-27 T 23-10-2018 CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF12848 ABC transporter 167 283 5.1E-9 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 288 485 2.59E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 313 436 5.3E-15 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 63 234 1.9E-28 T 23-10-2018 CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 3 189 1.88E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 289 490 2.2E-41 T 23-10-2018 CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 24 56 9.4E-6 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 4 62 3.7E-8 T 23-10-2018 CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 321 488 4.6E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_00015 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 29 173 4.8E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 Gene3D G3DSA:1.10.486.10 510 735 2.0E-110 T 23-10-2018 CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 Gene3D G3DSA:3.40.50.10930 194 387 4.5E-33 T 23-10-2018 CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 SUPERFAMILY SSF52540 417 895 7.21E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 SUPERFAMILY SSF52540 3 407 9.29E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 2 1224 13.914 T 23-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 Gene3D G3DSA:3.40.50.300 395 888 2.0E-110 T 23-10-2018 CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 Gene3D G3DSA:3.40.50.10930 2 104 3.4E-8 T 23-10-2018 CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 SUPERFAMILY SSF52980 910 1220 5.9E-33 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 3 887 1.6E-176 T 23-10-2018 CDG60_02650 5b1172a4e1dd439be8ca6fc3266ed0e1 1226 PIRSF PIRSF000980 2 1216 3.1E-155 T 23-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CDG60_09955 c4db062ca784460019898f935d3d8008 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 23-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_09955 c4db062ca784460019898f935d3d8008 402 PIRSF PIRSF001413 4 402 1.2E-160 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_09955 c4db062ca784460019898f935d3d8008 402 Gene3D G3DSA:3.40.50.1100 62 391 1.2E-171 T 23-10-2018 CDG60_09955 c4db062ca784460019898f935d3d8008 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 49.011 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_09955 c4db062ca784460019898f935d3d8008 402 SUPERFAMILY SSF53686 11 397 1.17E-134 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG60_09955 c4db062ca784460019898f935d3d8008 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 397 1.1E-167 T 23-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_09955 c4db062ca784460019898f935d3d8008 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 386 3.6E-48 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG60_09955 c4db062ca784460019898f935d3d8008 402 Gene3D G3DSA:3.40.50.1100 18 214 1.2E-171 T 23-10-2018 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 SUPERFAMILY SSF55124 1 125 5.23E-28 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 SUPERFAMILY SSF56014 406 545 2.09E-37 T 23-10-2018 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 2.4E-38 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 SUPERFAMILY SSF56014 120 276 6.94E-42 T 23-10-2018 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 Gene3D G3DSA:3.30.413.10 119 315 8.6E-74 T 23-10-2018 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 408 544 7.7E-9 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 5.1E-15 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 330 395 4.9E-15 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 Gene3D G3DSA:3.30.413.10 406 547 1.7E-29 T 23-10-2018 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 SUPERFAMILY SSF55124 253 419 3.93E-23 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG60_04325 89bc7fd9a705088f2515523dbdc22950 547 Gene3D G3DSA:3.90.480.10 53 387 8.6E-74 T 23-10-2018 CDG60_06565 6503b38775028415b511a48dc9956dc3 830 SUPERFAMILY SSF56281 565 804 7.39E-42 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_06565 6503b38775028415b511a48dc9956dc3 830 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 277 471 2.8E-22 T 23-10-2018 IPR004477 ComEC/Rec2-related protein CDG60_06565 6503b38775028415b511a48dc9956dc3 830 Gene3D G3DSA:3.60.15.10 563 815 6.5E-54 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_06565 6503b38775028415b511a48dc9956dc3 830 Pfam PF03772 Competence protein 255 540 2.4E-54 T 23-10-2018 IPR004477 ComEC/Rec2-related protein CDG60_06565 6503b38775028415b511a48dc9956dc3 830 SMART SM00849 574 771 0.0042 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_06565 6503b38775028415b511a48dc9956dc3 830 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 153 800 9.7E-93 T 23-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CDG60_06565 6503b38775028415b511a48dc9956dc3 830 Pfam PF00753 Metallo-beta-lactamase superfamily 571 642 6.1E-8 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_06565 6503b38775028415b511a48dc9956dc3 830 Pfam PF13567 Domain of unknown function (DUF4131) 44 200 2.5E-9 T 23-10-2018 IPR025405 Domain of unknown function DUF4131 CDG60_14265 3a35b9d8d5c73675d5e6b9696866ba74 182 Pfam PF00743 Flavin-binding monooxygenase-like 8 175 6.7E-18 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG60_14265 3a35b9d8d5c73675d5e6b9696866ba74 182 Gene3D G3DSA:3.50.50.60 1 176 9.7E-50 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_14265 3a35b9d8d5c73675d5e6b9696866ba74 182 SUPERFAMILY SSF51905 4 175 5.55E-38 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 SUPERFAMILY SSF53474 9 278 1.35E-49 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 PRINTS PR00412 Epoxide hydrolase signature 100 113 1.6E-16 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 PRINTS PR00412 Epoxide hydrolase signature 35 53 1.6E-16 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 PRINTS PR00412 Epoxide hydrolase signature 222 238 1.6E-16 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 PRINTS PR00412 Epoxide hydrolase signature 114 127 1.6E-16 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 PRINTS PR00412 Epoxide hydrolase signature 255 277 1.6E-16 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 PRINTS PR00412 Epoxide hydrolase signature 55 70 1.6E-16 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 Gene3D G3DSA:3.40.50.1820 9 277 1.8E-55 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_00800 58fcccdfad5dbce304986f992ea87aaa 280 Pfam PF00561 alpha/beta hydrolase fold 30 137 1.8E-18 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_17430 776a090f6372f43cff295d9244aff896 303 Pfam PF07859 alpha/beta hydrolase fold 75 277 4.5E-58 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG60_17430 776a090f6372f43cff295d9244aff896 303 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 75 91 - T 23-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 CDG60_17430 776a090f6372f43cff295d9244aff896 303 SUPERFAMILY SSF53474 27 298 4.99E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_17430 776a090f6372f43cff295d9244aff896 303 Gene3D G3DSA:3.40.50.1820 39 300 2.0E-79 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_17430 776a090f6372f43cff295d9244aff896 303 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 23-10-2018 IPR033140 Lipase, GDXG, putative serine active site CDG60_05680 1b2357f4b0cc200da1264045fd38389a 328 Pfam PF14398 YheC/D like ATP-grasp 87 312 1.3E-50 T 23-10-2018 IPR026838 Endospore coat-associated protein YheC/D CDG60_05680 1b2357f4b0cc200da1264045fd38389a 328 Gene3D G3DSA:3.30.470.20 199 320 3.5E-8 T 23-10-2018 CDG60_05680 1b2357f4b0cc200da1264045fd38389a 328 SUPERFAMILY SSF56059 110 309 1.57E-15 T 23-10-2018 CDG60_09230 4e94a6e8415000eaa9135a246bcb1c28 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG60_09230 4e94a6e8415000eaa9135a246bcb1c28 393 Gene3D G3DSA:3.40.47.10 4 392 3.9E-123 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_09230 4e94a6e8415000eaa9135a246bcb1c28 393 SUPERFAMILY SSF53901 7 391 3.36E-48 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_09230 4e94a6e8415000eaa9135a246bcb1c28 393 PIRSF PIRSF000429 1 391 2.6E-67 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_09230 4e94a6e8415000eaa9135a246bcb1c28 393 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG60_09230 4e94a6e8415000eaa9135a246bcb1c28 393 Pfam PF02803 Thiolase, C-terminal domain 270 374 1.2E-11 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_09230 4e94a6e8415000eaa9135a246bcb1c28 393 Pfam PF00108 Thiolase, N-terminal domain 5 190 8.1E-18 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_09970 6213b667e1545989b3bb73128221767f 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 181 3.5E-14 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_09970 6213b667e1545989b3bb73128221767f 283 SMART SM00382 30 188 2.6E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_09970 6213b667e1545989b3bb73128221767f 283 Gene3D G3DSA:3.40.50.300 5 213 1.3E-27 T 23-10-2018 CDG60_09970 6213b667e1545989b3bb73128221767f 283 SUPERFAMILY SSF52540 16 256 7.92E-37 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 SUPERFAMILY SSF53901 278 400 1.31E-42 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 Gene3D G3DSA:3.40.47.10 141 398 2.4E-155 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 Gene3D G3DSA:3.40.47.10 6 282 2.4E-155 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 5.0E-81 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 3.5E-223 T 23-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 SUPERFAMILY SSF53901 3 276 4.51E-84 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 PIRSF PIRSF000429 1 401 3.3E-131 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 8.7E-139 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_14370 be8317fa2e6ad815e9bb43bdff99fb3e 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 6.9E-44 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82693 39 131 1.88E-25 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:3.30.70.1430 39 814 0.0 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1028 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:3.30.70.1440 666 861 0.0 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82693 562 668 4.92E-21 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:1.20.1640.10 510 1018 0.0 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82866 833 1021 2.88E-39 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82714 183 273 5.49E-20 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82866 297 498 1.96E-46 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 4.4E-100 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Pfam PF00873 AcrB/AcrD/AcrF family 3 1022 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:3.30.70.1430 564 665 0.0 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82693 137 331 1.41E-21 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82714 721 804 1.96E-18 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 Gene3D G3DSA:1.20.1640.10 9 509 0.0 T 23-10-2018 CDG60_05895 2c76b5186906a882a8af3cb78f7c78e2 1034 SUPERFAMILY SSF82693 669 844 1.52E-10 T 23-10-2018 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 94 2.2E-31 T 23-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 SUPERFAMILY SSF54368 2 99 2.35E-35 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 Gene3D G3DSA:3.30.590.10 104 457 1.7E-136 T 23-10-2018 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 23-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 Pfam PF00120 Glutamine synthetase, catalytic domain 101 466 4.8E-131 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 23-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 23-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 7.1E-195 T 23-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 SUPERFAMILY SSF55931 101 468 7.75E-129 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 SMART SM01230 101 379 6.1E-130 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_12970 0bdc0fa69f1e0fadf67ef01c54ef27fc 469 Gene3D G3DSA:3.10.20.70 1 103 4.5E-38 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_10495 62c3e4c67c7a1179b1ac6cb2ca593a69 404 Pfam PF03616 Sodium/glutamate symporter 4 373 4.6E-140 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG60_10495 62c3e4c67c7a1179b1ac6cb2ca593a69 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 403 1.6E-150 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG60_10495 62c3e4c67c7a1179b1ac6cb2ca593a69 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 404 24.809 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG60_09475 151c0468fcaa39a425924422dffbb5d7 490 PIRSF PIRSF006446 3 464 7.1E-218 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG60_09475 151c0468fcaa39a425924422dffbb5d7 490 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 438 4.4E-170 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG60_02685 2786b9eff8632ef910b83795e1e0324c 86 Pfam PF04325 Protein of unknown function (DUF465) 31 78 3.4E-13 T 23-10-2018 IPR007420 Protein of unknown function DUF465 CDG60_02685 2786b9eff8632ef910b83795e1e0324c 86 Gene3D G3DSA:1.20.58.660 13 86 2.2E-24 T 23-10-2018 CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SMART SM00091 397 463 0.0043 T 23-10-2018 IPR000014 PAS domain CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Pfam PF13426 PAS domain 408 512 3.6E-13 T 23-10-2018 IPR000014 PAS domain CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SUPERFAMILY SSF55785 319 389 7.15E-8 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Gene3D G3DSA:3.30.450.20 392 515 4.9E-21 T 23-10-2018 CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SMART SM00086 471 513 0.002 T 23-10-2018 IPR001610 PAC motif CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SMART SM00086 345 389 0.014 T 23-10-2018 IPR001610 PAC motif CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SUPERFAMILY SSF55073 529 687 5.1E-31 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Pfam PF08447 PAS fold 320 382 1.7E-11 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SUPERFAMILY SSF55785 408 520 4.89E-18 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SUPERFAMILY SSF141868 700 948 5.49E-87 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Gene3D G3DSA:3.30.70.270 518 697 3.6E-38 T 23-10-2018 CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SMART SM00267 513 685 1.7E-29 T 23-10-2018 IPR000160 GGDEF domain CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 684 1.5E-19 T 23-10-2018 IPR000160 GGDEF domain CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 680 3.1E-29 T 23-10-2018 IPR000160 GGDEF domain CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Gene3D G3DSA:3.20.20.450 698 948 2.1E-98 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Gene3D G3DSA:3.30.450.20 266 384 1.9E-14 T 23-10-2018 CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 SMART SM00052 695 940 3.7E-109 T 23-10-2018 IPR001633 EAL domain CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 Pfam PF00563 EAL domain 701 935 3.1E-77 T 23-10-2018 IPR001633 EAL domain CDG60_06100 472842c333c77064a3bf5c4e03f34560 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 520 1.8E-15 T 23-10-2018 IPR000014 PAS domain CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 23-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 2.0E-159 T 23-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 PIRSF PIRSF001369 3 376 8.1E-120 T 23-10-2018 IPR024176 Citrate synthase, bacterial-type CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 2.2E-116 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 Gene3D G3DSA:1.10.230.10 224 322 4.3E-123 T 23-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 Gene3D G3DSA:1.10.580.10 32 355 4.3E-123 T 23-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 SUPERFAMILY SSF48256 6 375 6.93E-126 T 23-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 PRINTS PR00143 Citrate synthase signature 251 271 2.6E-37 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 PRINTS PR00143 Citrate synthase signature 308 324 2.6E-37 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 PRINTS PR00143 Citrate synthase signature 126 139 2.6E-37 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 PRINTS PR00143 Citrate synthase signature 176 191 2.6E-37 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 PRINTS PR00143 Citrate synthase signature 198 226 2.6E-37 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_08490 f199059347162df92ac9c5ebf03ac5c2 378 PRINTS PR00143 Citrate synthase signature 328 342 2.6E-37 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05880 ca63448834cab5d084e9775c98360bfb 386 Pfam PF00196 Bacterial regulatory proteins, luxR family 321 374 6.0E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_05880 ca63448834cab5d084e9775c98360bfb 386 Gene3D G3DSA:1.10.10.10 290 380 5.6E-13 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_05880 ca63448834cab5d084e9775c98360bfb 386 SMART SM00421 318 375 5.0E-12 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_05880 ca63448834cab5d084e9775c98360bfb 386 SUPERFAMILY SSF46894 313 376 9.52E-14 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_05880 ca63448834cab5d084e9775c98360bfb 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 335 351 3.7E-5 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_05880 ca63448834cab5d084e9775c98360bfb 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 321 335 3.7E-5 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_05880 ca63448834cab5d084e9775c98360bfb 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 351 363 3.7E-5 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_00950 141d439796850cc8e16d1f9dadc862ec 330 Gene3D G3DSA:3.40.190.10 46 321 4.3E-105 T 23-10-2018 CDG60_00950 141d439796850cc8e16d1f9dadc862ec 330 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 46 328 2.4E-72 T 23-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CDG60_00950 141d439796850cc8e16d1f9dadc862ec 330 Gene3D G3DSA:1.10.8.450 255 289 4.3E-105 T 23-10-2018 CDG60_00950 141d439796850cc8e16d1f9dadc862ec 330 SUPERFAMILY SSF53850 44 275 3.08E-48 T 23-10-2018 CDG60_00950 141d439796850cc8e16d1f9dadc862ec 330 SMART SM00062 45 260 3.7E-21 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG60_00950 141d439796850cc8e16d1f9dadc862ec 330 Gene3D G3DSA:3.40.190.10 124 223 4.3E-105 T 23-10-2018 CDG60_00950 141d439796850cc8e16d1f9dadc862ec 330 Pfam PF13379 NMT1-like family 41 268 3.4E-18 T 23-10-2018 CDG60_08830 1d8fb73a43a842995a173efd810556ff 466 SMART SM01236 136 234 1.6E-21 T 23-10-2018 CDG60_08830 1d8fb73a43a842995a173efd810556ff 466 Gene3D G3DSA:1.20.910.10 92 279 1.8E-11 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_08830 1d8fb73a43a842995a173efd810556ff 466 Pfam PF14518 Iron-containing redox enzyme 105 253 1.1E-29 T 23-10-2018 CDG60_07155 bb48bb893ae1000e3452428e5614821f 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 367 39.083 T 23-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDG60_07155 bb48bb893ae1000e3452428e5614821f 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 366 1.8E-132 T 23-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDG60_07155 bb48bb893ae1000e3452428e5614821f 378 SUPERFAMILY SSF52402 2 245 1.46E-54 T 23-10-2018 CDG60_07155 bb48bb893ae1000e3452428e5614821f 378 Gene3D G3DSA:3.40.50.620 1 214 4.5E-89 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_07155 bb48bb893ae1000e3452428e5614821f 378 Gene3D G3DSA:2.40.30.10 284 374 2.9E-28 T 23-10-2018 CDG60_07155 bb48bb893ae1000e3452428e5614821f 378 Pfam PF03054 tRNA methyl transferase 3 366 1.1E-133 T 23-10-2018 CDG60_07155 bb48bb893ae1000e3452428e5614821f 378 Gene3D G3DSA:2.30.30.280 215 282 7.4E-25 T 23-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDG60_11405 62f6fbb90251a042f336b453c501ddaf 188 Gene3D G3DSA:2.60.450.10 34 182 2.1E-44 T 23-10-2018 CDG60_11405 62f6fbb90251a042f336b453c501ddaf 188 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 11 178 24.309 T 23-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CDG60_11405 62f6fbb90251a042f336b453c501ddaf 188 Pfam PF03968 OstA-like protein 44 153 2.4E-25 T 23-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CDG60_11405 62f6fbb90251a042f336b453c501ddaf 188 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 33 177 1.3E-41 T 23-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CDG60_06380 94eb4b78b2e58bd36697b0ff567aa5c0 659 Gene3D G3DSA:2.120.10.30 44 266 1.3E-16 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG60_06380 94eb4b78b2e58bd36697b0ff567aa5c0 659 Gene3D G3DSA:2.120.10.30 333 659 2.0E-114 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG60_06380 94eb4b78b2e58bd36697b0ff567aa5c0 659 SUPERFAMILY SSF50956 339 658 1.31E-80 T 23-10-2018 CDG60_06380 94eb4b78b2e58bd36697b0ff567aa5c0 659 Pfam PF02333 Phytase 331 657 1.5E-72 T 23-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 CDG60_06380 94eb4b78b2e58bd36697b0ff567aa5c0 659 Pfam PF02333 Phytase 163 245 2.8E-5 T 23-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 CDG60_06380 94eb4b78b2e58bd36697b0ff567aa5c0 659 SUPERFAMILY SSF50956 62 320 9.15E-27 T 23-10-2018 CDG60_00145 54d46367105d72fcf7ee590a7f87af07 472 Gene3D G3DSA:3.30.930.30 2 200 2.6E-69 T 23-10-2018 CDG60_00145 54d46367105d72fcf7ee590a7f87af07 472 Pfam PF03389 MobA/MobL family 17 221 2.3E-60 T 23-10-2018 IPR005053 MobA/MobL protein CDG60_00875 b1a41a7fe4eb053e1926825c95141c9a 449 SUPERFAMILY SSF103473 10 431 3.14E-84 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_00875 b1a41a7fe4eb053e1926825c95141c9a 449 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 8 403 1.2E-128 T 23-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 CDG60_00875 b1a41a7fe4eb053e1926825c95141c9a 449 Gene3D G3DSA:1.20.1250.20 21 434 9.4E-78 T 23-10-2018 CDG60_00875 b1a41a7fe4eb053e1926825c95141c9a 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_00875 b1a41a7fe4eb053e1926825c95141c9a 449 Pfam PF07690 Major Facilitator Superfamily 29 317 2.5E-40 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_01220 e1a04aaed5badc3f9b54987dc272b7fe 138 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 50 123 1.3E-32 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG60_01220 e1a04aaed5badc3f9b54987dc272b7fe 138 Gene3D G3DSA:3.10.20.400 18 114 2.8E-37 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDG60_01220 e1a04aaed5badc3f9b54987dc272b7fe 138 SUPERFAMILY SSF141734 24 132 9.42E-45 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDG60_01220 e1a04aaed5badc3f9b54987dc272b7fe 138 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 73 123 1.0E-21 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG60_01220 e1a04aaed5badc3f9b54987dc272b7fe 138 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 24 127 29.459 T 23-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 Pfam PF13721 SecD export protein N-terminal TM region 2 102 7.2E-35 T 23-10-2018 IPR027398 SecD export protein N-terminal TM domain CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 Pfam PF02355 Protein export membrane protein 455 621 9.5E-18 T 23-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 Pfam PF07549 SecD/SecF GG Motif 115 139 2.6E-7 T 23-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 356 611 4.6E-72 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 PRINTS PR00702 Acriflavin resistance protein family signature 520 544 8.1E-10 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 8.1E-10 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 PRINTS PR00702 Acriflavin resistance protein family signature 595 618 8.1E-10 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 632 50.091 T 23-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 Gene3D G3DSA:3.30.70.3400 221 455 1.7E-47 T 23-10-2018 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 Gene3D G3DSA:3.30.1360.200 279 449 1.7E-47 T 23-10-2018 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 Gene3D G3DSA:1.20.1640.10 465 623 1.5E-14 T 23-10-2018 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 SUPERFAMILY SSF82866 428 626 3.53E-45 T 23-10-2018 CDG60_03715 8ecbdc3aa4c4a934d729336531d5f81d 633 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 618 5.0E-136 T 23-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 Gene3D G3DSA:3.30.420.40 22 374 1.0E-113 T 23-10-2018 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 Gene3D G3DSA:2.60.34.10 380 516 5.3E-48 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 SUPERFAMILY SSF53067 201 376 8.84E-49 T 23-10-2018 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 42.832 T 23-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 SUPERFAMILY SSF100920 383 534 4.97E-48 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 212 222 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 149 169 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 465 481 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 PRINTS PR00301 70kDa heat shock protein signature 384 403 3.9E-53 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 Gene3D G3DSA:1.20.1270.10 519 614 4.7E-22 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 SUPERFAMILY SSF100934 503 614 1.65E-27 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 Pfam PF00012 Hsp70 protein 21 596 1.0E-175 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 SUPERFAMILY SSF53067 19 194 1.13E-53 T 23-10-2018 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 Gene3D G3DSA:3.90.640.10 239 311 1.0E-113 T 23-10-2018 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 614 7.0E-265 T 23-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 Gene3D G3DSA:3.30.420.40 191 361 1.0E-113 T 23-10-2018 CDG60_10090 c21096d033dbe991c9b17ef8428429a3 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG60_08360 756cfafb6d840ad3b1709f1bed49a169 334 Gene3D G3DSA:3.40.1190.20 7 314 1.4E-78 T 23-10-2018 IPR029056 Ribokinase-like CDG60_08360 756cfafb6d840ad3b1709f1bed49a169 334 SUPERFAMILY SSF53613 2 319 1.2E-73 T 23-10-2018 IPR029056 Ribokinase-like CDG60_08360 756cfafb6d840ad3b1709f1bed49a169 334 Gene3D G3DSA:3.30.1110.10 14 133 1.4E-78 T 23-10-2018 CDG60_08360 756cfafb6d840ad3b1709f1bed49a169 334 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 62 86 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CDG60_08360 756cfafb6d840ad3b1709f1bed49a169 334 Pfam PF00294 pfkB family carbohydrate kinase 58 318 8.8E-53 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB CDG60_05130 d66f9d90267e3a9223aaf42dda61ba69 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 4.8E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_05130 d66f9d90267e3a9223aaf42dda61ba69 224 SUPERFAMILY SSF52172 2 173 3.56E-38 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_05130 d66f9d90267e3a9223aaf42dda61ba69 224 Pfam PF00072 Response regulator receiver domain 5 114 5.0E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_05130 d66f9d90267e3a9223aaf42dda61ba69 224 SMART SM00862 150 221 2.0E-20 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_05130 d66f9d90267e3a9223aaf42dda61ba69 224 Gene3D G3DSA:3.40.50.2300 1 123 1.9E-37 T 23-10-2018 CDG60_05130 d66f9d90267e3a9223aaf42dda61ba69 224 SMART SM00448 2 113 1.2E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_05130 d66f9d90267e3a9223aaf42dda61ba69 224 Gene3D G3DSA:1.10.10.10 126 223 1.0E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 SUPERFAMILY SSF51569 7 295 2.72E-103 T 23-10-2018 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 Pfam PF00701 Dihydrodipicolinate synthetase family 9 292 1.2E-100 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 6.3E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 6.3E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 6.3E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 6.3E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 Gene3D G3DSA:3.20.20.70 7 298 1.8E-116 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 23-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 294 65.684 T 23-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 PIRSF PIRSF001365 3 298 2.2E-94 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 292 2.2E-109 T 23-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 23-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CDG60_17670 0d6cfd697aac22cd281c51636d8e4adc 299 SMART SM01130 7 296 3.2E-141 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 195 271 3.1E-29 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 SMART SM00342 24 105 4.2E-21 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 SUPERFAMILY SSF53155 111 193 4.51E-16 T 23-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 245 251 - T 23-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 SUPERFAMILY SSF46767 194 276 9.03E-29 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 Pfam PF12833 Helix-turn-helix domain 30 105 3.9E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 SUPERFAMILY SSF46689 7 58 3.58E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 Gene3D G3DSA:3.30.160.70 104 193 2.2E-18 T 23-10-2018 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 196 275 1.1E-26 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 Gene3D G3DSA:1.10.10.60 6 103 4.6E-22 T 23-10-2018 CDG60_15305 31952e260d8535302b1e1a317af4f9ae 283 Gene3D G3DSA:1.10.10.10 194 279 8.7E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 Gene3D G3DSA:1.10.287.130 222 290 3.3E-23 T 23-10-2018 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 SUPERFAMILY SSF55874 279 445 1.13E-42 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 5.6E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 5.6E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 5.6E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 5.6E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 Gene3D G3DSA:3.30.565.10 293 451 9.9E-37 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 SUPERFAMILY SSF47384 213 291 2.55E-20 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 289 2.5E-18 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 Pfam PF11808 Domain of unknown function (DUF3329) 27 106 7.3E-15 T 23-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 Gene3D G3DSA:3.30.450.20 107 221 8.0E-7 T 23-10-2018 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 SMART SM00388 224 290 9.8E-20 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 446 7.0E-24 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 SMART SM00387 335 447 6.3E-36 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_17590 87e3b7cf8466623854edcffd21a36880 454 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 116 443 6.7E-124 T 23-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 Gene3D G3DSA:3.20.20.70 2 331 5.8E-129 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 331 2.8E-127 T 23-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 49.37 T 23-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 SUPERFAMILY SSF51395 1 332 6.11E-104 T 23-10-2018 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 PIRSF PIRSF000164 14 335 1.2E-94 T 23-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CDG60_07785 b85799e3a45b45e4d24d1c6f5a2dd456 335 Pfam PF01180 Dihydroorotate dehydrogenase 44 329 4.2E-84 T 23-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CDG60_05400 e2a6dc79f7dfd8def3eff0f05f8a8133 126 Gene3D G3DSA:2.40.40.20 1 126 5.1E-51 T 23-10-2018 CDG60_05400 e2a6dc79f7dfd8def3eff0f05f8a8133 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 9.5E-46 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG60_05400 e2a6dc79f7dfd8def3eff0f05f8a8133 126 PIRSF PIRSF006246 1 124 7.1E-46 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG60_05400 e2a6dc79f7dfd8def3eff0f05f8a8133 126 SUPERFAMILY SSF50692 1 122 1.49E-45 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDG60_05400 e2a6dc79f7dfd8def3eff0f05f8a8133 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-62 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG60_05400 e2a6dc79f7dfd8def3eff0f05f8a8133 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.6E-45 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG60_05400 e2a6dc79f7dfd8def3eff0f05f8a8133 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 64.042 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG60_13520 0210cfb615e5026632bddfb78074485c 405 Pfam PF07690 Major Facilitator Superfamily 19 361 7.2E-41 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_13520 0210cfb615e5026632bddfb78074485c 405 Gene3D G3DSA:1.20.1720.10 14 392 3.3E-99 T 23-10-2018 CDG60_13520 0210cfb615e5026632bddfb78074485c 405 SUPERFAMILY SSF103473 4 390 5.49E-57 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_13520 0210cfb615e5026632bddfb78074485c 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 386 2.5E-83 T 23-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CDG60_16575 c52c6d4806bd3c8681a093120342c48f 548 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 366 522 1.2E-12 T 23-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CDG60_16575 c52c6d4806bd3c8681a093120342c48f 548 Pfam PF04932 O-Antigen ligase 192 339 8.6E-16 T 23-10-2018 IPR007016 O-antigen ligase-related CDG60_16575 c52c6d4806bd3c8681a093120342c48f 548 Pfam PF15864 Protein glycosylation ligase 154 179 1.5E-8 T 23-10-2018 IPR031726 Protein glycosylation ligase domain CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 38 135 1.1E-9 T 23-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 SUPERFAMILY SSF53187 163 477 5.02E-124 T 23-10-2018 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 1.9E-53 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 1.9E-53 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 PRINTS PR00481 Cytosol aminopeptidase signature 355 370 1.9E-53 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 1.9E-53 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 1.9E-53 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 Gene3D G3DSA:3.40.220.10 1 166 2.9E-15 T 23-10-2018 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 SUPERFAMILY SSF52949 1 166 1.35E-12 T 23-10-2018 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 23-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 169 470 1.8E-123 T 23-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 Gene3D G3DSA:3.40.630.10 167 479 7.7E-137 T 23-10-2018 CDG60_01985 f8381dce1a8cc3071494a73e80c5dc8d 482 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 479 35.451 T 23-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CDG60_01435 a4183aeee80cda69b0562130358f2a6b 93 Pfam PF11391 Protein of unknown function (DUF2798) 26 83 1.7E-16 T 23-10-2018 IPR021529 Protein of unknown function DUF2798 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Gene3D G3DSA:1.10.3170.10 165 381 3.5E-72 T 23-10-2018 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1229 15.522 T 23-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 SUPERFAMILY SSF52980 926 1229 6.43E-58 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Pfam PF12705 PD-(D/E)XK nuclease superfamily 990 1200 6.2E-7 T 23-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Gene3D G3DSA:3.40.50.300 485 865 2.2E-70 T 23-10-2018 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Gene3D G3DSA:1.10.486.10 612 758 2.2E-70 T 23-10-2018 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 471 1.9E-49 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Gene3D G3DSA:3.40.50.300 20 470 3.5E-72 T 23-10-2018 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 SUPERFAMILY SSF52540 18 860 4.37E-87 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Pfam PF13361 UvrD-like helicase C-terminal domain 481 858 3.4E-23 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG60_02655 b5cb7436226b21634264ace990a6a7b7 1244 Gene3D G3DSA:3.90.320.10 919 1234 2.1E-66 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 PIRSF PIRSF006630 1 540 2.5E-201 T 23-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 Pfam PF00795 Carbon-nitrogen hydrolase 5 244 1.0E-30 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 Pfam PF02540 NAD synthase 264 513 2.1E-74 T 23-10-2018 IPR022310 NAD/GMP synthase CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 Gene3D G3DSA:3.60.110.10 1 256 2.1E-101 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 Gene3D G3DSA:3.40.50.620 261 540 3.8E-112 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 513 4.3E-61 T 23-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 SUPERFAMILY SSF52402 259 523 2.56E-77 T 23-10-2018 CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 SUPERFAMILY SSF56317 1 245 2.49E-62 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG60_05545 3ce00fda5e6d4a1c8cdbeca518303e1e 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 539 28.354 T 23-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDG60_15605 c9a8871b4f3019fb9f351425fe3a072a 778 Pfam PF00593 TonB dependent receptor 239 777 2.2E-54 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_15605 c9a8871b4f3019fb9f351425fe3a072a 778 Gene3D G3DSA:2.170.130.10 47 175 8.3E-42 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_15605 c9a8871b4f3019fb9f351425fe3a072a 778 SUPERFAMILY SSF56935 26 778 2.56E-128 T 23-10-2018 CDG60_15605 c9a8871b4f3019fb9f351425fe3a072a 778 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 777 3.7E-93 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG60_15605 c9a8871b4f3019fb9f351425fe3a072a 778 Gene3D G3DSA:2.40.170.20 178 778 5.4E-134 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_15605 c9a8871b4f3019fb9f351425fe3a072a 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 163 1.2E-19 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_02850 f66434f734e5f919af6841315a8ef15e 317 Gene3D G3DSA:3.40.50.720 19 312 2.8E-112 T 23-10-2018 CDG60_02850 f66434f734e5f919af6841315a8ef15e 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 315 1.9E-24 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG60_02850 f66434f734e5f919af6841315a8ef15e 317 SUPERFAMILY SSF52283 16 137 5.86E-28 T 23-10-2018 CDG60_02850 f66434f734e5f919af6841315a8ef15e 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 9.9E-54 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG60_02850 f66434f734e5f919af6841315a8ef15e 317 Gene3D G3DSA:3.40.50.720 98 285 2.8E-112 T 23-10-2018 CDG60_02850 f66434f734e5f919af6841315a8ef15e 317 SUPERFAMILY SSF51735 102 287 8.36E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_02850 f66434f734e5f919af6841315a8ef15e 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 23-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 PIRSF PIRSF006485 1 440 1.1E-171 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 150 7.7E-21 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 306 6.7E-23 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 Pfam PF01926 50S ribosome-binding GTPase 5 119 5.9E-24 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 Pfam PF01926 50S ribosome-binding GTPase 179 296 9.8E-24 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 2.7E-25 T 23-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 SUPERFAMILY SSF52540 137 438 2.38E-63 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 SUPERFAMILY SSF52540 4 168 1.52E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 Hamap MF_00195 GTPase Der [der]. 2 435 37.648 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 Gene3D G3DSA:3.40.50.300 1 160 1.5E-42 T 23-10-2018 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 Gene3D G3DSA:3.40.50.300 171 349 4.8E-48 T 23-10-2018 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 Gene3D G3DSA:3.30.300.20 352 434 2.1E-19 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 5.0E-176 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.0E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_15130 1c2637fdce46d5b8ceb3b1e978dd33f4 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.0E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 SUPERFAMILY SSF53335 92 473 9.88E-62 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 119 131 1.2E-17 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 183 202 1.2E-17 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 395 417 1.2E-17 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 418 432 1.2E-17 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 Pfam PF01555 DNA methylase 119 452 9.3E-43 T 23-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 PIRSF PIRSF015855 3 631 3.4E-165 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_03555 5d3b20660bb216575e8f99128f2af30a 636 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_13290 be0be63f80b20d71b2de4f80eca8c75c 343 SUPERFAMILY SSF56436 67 339 6.12E-65 T 23-10-2018 IPR016187 C-type lectin fold CDG60_13290 be0be63f80b20d71b2de4f80eca8c75c 343 Pfam PF03781 Sulfatase-modifying factor enzyme 1 68 339 4.1E-61 T 23-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CDG60_13290 be0be63f80b20d71b2de4f80eca8c75c 343 Gene3D G3DSA:3.90.1580.10 60 343 1.3E-74 T 23-10-2018 CDG60_15005 a7283726546f0bd06113f01789946036 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.4E-39 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.4E-39 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.4E-39 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 Gene3D G3DSA:1.10.720.90 2 55 2.1E-23 T 23-10-2018 CDG60_15005 a7283726546f0bd06113f01789946036 119 Gene3D G3DSA:1.10.1900.20 56 118 2.2E-25 T 23-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.1E-47 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 SUPERFAMILY SSF74731 3 117 3.66E-47 T 23-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 Pfam PF00453 Ribosomal protein L20 3 109 3.2E-46 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.265 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15005 a7283726546f0bd06113f01789946036 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 23-10-2018 CDG60_15005 a7283726546f0bd06113f01789946036 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11470 b10185d2c1d28b62d60d7d8b67809830 321 Gene3D G3DSA:1.20.120.920 110 320 2.7E-69 T 23-10-2018 CDG60_11470 b10185d2c1d28b62d60d7d8b67809830 321 Gene3D G3DSA:3.100.10.20 11 109 3.7E-48 T 23-10-2018 CDG60_11470 b10185d2c1d28b62d60d7d8b67809830 321 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 16 319 16.202 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CDG60_11470 b10185d2c1d28b62d60d7d8b67809830 321 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 289 1.7E-60 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CDG60_11470 b10185d2c1d28b62d60d7d8b67809830 321 Pfam PF01867 CRISPR associated protein Cas1 21 289 1.1E-12 T 23-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CDG60_11470 b10185d2c1d28b62d60d7d8b67809830 321 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 12 309 2.2E-143 T 23-10-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 Gene3D G3DSA:3.40.1260.20 399 504 1.3E-30 T 23-10-2018 CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 SUPERFAMILY SSF50249 40 123 8.57E-16 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 Gene3D G3DSA:2.40.50.140 31 123 2.3E-28 T 23-10-2018 CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 Hamap MF_00970 Ribonuclease E [rne]. 1 1095 33.781 T 23-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 Pfam PF00575 S1 RNA binding domain 36 116 2.1E-9 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 SMART SM00316 37 117 7.2E-8 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 9.8E-159 T 23-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CDG60_02935 1b5053058f1fcac24118cc3e90eb49dc 1109 Pfam PF10150 Ribonuclease E/G family 119 388 8.1E-94 T 23-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CDG60_03285 b16f1dde38dfb99e97ca296eb511bdf1 663 Pfam PF13361 UvrD-like helicase C-terminal domain 281 601 8.2E-44 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG60_03285 b16f1dde38dfb99e97ca296eb511bdf1 663 Gene3D G3DSA:3.40.50.300 284 625 5.5E-67 T 23-10-2018 CDG60_03285 b16f1dde38dfb99e97ca296eb511bdf1 663 Gene3D G3DSA:1.10.486.10 386 531 5.5E-67 T 23-10-2018 CDG60_03285 b16f1dde38dfb99e97ca296eb511bdf1 663 Gene3D G3DSA:1.10.10.160 109 193 2.1E-71 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily CDG60_03285 b16f1dde38dfb99e97ca296eb511bdf1 663 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 274 1.3E-53 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG60_03285 b16f1dde38dfb99e97ca296eb511bdf1 663 Gene3D G3DSA:3.40.50.300 10 275 2.1E-71 T 23-10-2018 CDG60_03285 b16f1dde38dfb99e97ca296eb511bdf1 663 SUPERFAMILY SSF52540 6 605 7.34E-124 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07775 b0942224918dd38adafbc0daec3585d8 379 Gene3D G3DSA:3.30.420.380 6 166 2.2E-9 T 23-10-2018 CDG60_07775 b0942224918dd38adafbc0daec3585d8 379 Gene3D G3DSA:3.30.1360.100 298 379 1.3E-8 T 23-10-2018 CDG60_07775 b0942224918dd38adafbc0daec3585d8 379 Pfam PF05134 Type II secretion system (T2SS), protein L 25 166 1.7E-9 T 23-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CDG60_07775 b0942224918dd38adafbc0daec3585d8 379 SUPERFAMILY SSF53067 8 135 2.59E-11 T 23-10-2018 CDG60_07775 b0942224918dd38adafbc0daec3585d8 379 Pfam PF12693 GspL periplasmic domain 232 374 4.1E-10 T 23-10-2018 IPR025691 GspL periplasmic domain CDG60_07775 b0942224918dd38adafbc0daec3585d8 379 PIRSF PIRSF015761 18 379 2.9E-14 T 23-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CDG60_10295 c2fe5bfbe934ac3490d6a39aa61067a5 229 Pfam PF02224 Cytidylate kinase 6 223 8.9E-65 T 23-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDG60_10295 c2fe5bfbe934ac3490d6a39aa61067a5 229 SUPERFAMILY SSF52540 5 226 2.67E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10295 c2fe5bfbe934ac3490d6a39aa61067a5 229 Hamap MF_00238 Cytidylate kinase [cmk]. 4 227 31.863 T 23-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDG60_10295 c2fe5bfbe934ac3490d6a39aa61067a5 229 Gene3D G3DSA:3.40.50.300 1 228 4.6E-76 T 23-10-2018 CDG60_10295 c2fe5bfbe934ac3490d6a39aa61067a5 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 222 1.3E-68 T 23-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 Gene3D G3DSA:3.40.50.150 97 451 2.8E-104 T 23-10-2018 CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 SUPERFAMILY SSF53335 84 456 3.03E-76 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 Gene3D G3DSA:2.40.50.140 1 96 9.0E-19 T 23-10-2018 CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 Gene3D G3DSA:3.40.1350.30 144 286 2.8E-104 T 23-10-2018 CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 16 457 64.91 T 23-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 107 456 2.5E-28 T 23-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 42 449 7.1E-96 T 23-10-2018 CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 418 - T 23-10-2018 IPR030390 RNA methyltransferase TrmA, active site CDG60_03695 4d28f33f11bed131e96fd96898aad01c 463 SUPERFAMILY SSF50249 3 74 1.2E-8 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_11535 c1a16508b56580779fcf0e81a4884a70 371 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 149 226 4.8E-18 T 23-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDG60_11535 c1a16508b56580779fcf0e81a4884a70 371 Gene3D G3DSA:3.40.47.10 2 212 2.7E-54 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11535 c1a16508b56580779fcf0e81a4884a70 371 Gene3D G3DSA:3.40.47.10 213 369 1.0E-37 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11535 c1a16508b56580779fcf0e81a4884a70 371 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 275 367 3.3E-21 T 23-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDG60_11535 c1a16508b56580779fcf0e81a4884a70 371 SUPERFAMILY SSF53901 2 367 9.17E-47 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11535 c1a16508b56580779fcf0e81a4884a70 371 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site CDG60_10685 bfb6553da2b2faee69549362878e70fc 540 SUPERFAMILY SSF56801 5 536 4.84E-126 T 23-10-2018 CDG60_10685 bfb6553da2b2faee69549362878e70fc 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 525 2.0E-10 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG60_10685 bfb6553da2b2faee69549362878e70fc 540 Gene3D G3DSA:3.40.50.12780 2 436 1.8E-114 T 23-10-2018 CDG60_10685 bfb6553da2b2faee69549362878e70fc 540 Pfam PF00501 AMP-binding enzyme 17 441 5.2E-85 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG60_10685 bfb6553da2b2faee69549362878e70fc 540 Gene3D G3DSA:3.30.300.310 437 539 1.9E-28 T 23-10-2018 CDG60_10685 bfb6553da2b2faee69549362878e70fc 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG60_14875 e7783a45a6ca802a28fdab570a1fbe79 173 PIRSF PIRSF029548 1 160 7.4E-35 T 23-10-2018 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type CDG60_14875 e7783a45a6ca802a28fdab570a1fbe79 173 Gene3D G3DSA:3.30.750.24 4 108 9.2E-12 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_14875 e7783a45a6ca802a28fdab570a1fbe79 173 SUPERFAMILY SSF52091 8 105 1.82E-12 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_05760 a023f5aacf0a5e015f3ad817b329073a 107 Gene3D G3DSA:3.30.110.60 2 105 7.1E-31 T 23-10-2018 IPR035920 YhbY-like superfamily CDG60_05760 a023f5aacf0a5e015f3ad817b329073a 107 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 86 3.0E-20 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDG60_05760 a023f5aacf0a5e015f3ad817b329073a 107 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 92 5.5E-23 T 23-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CDG60_05760 a023f5aacf0a5e015f3ad817b329073a 107 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 87 4.0E-20 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDG60_05760 a023f5aacf0a5e015f3ad817b329073a 107 SUPERFAMILY SSF75471 4 97 1.57E-26 T 23-10-2018 IPR035920 YhbY-like superfamily CDG60_05760 a023f5aacf0a5e015f3ad817b329073a 107 SMART SM01103 4 87 5.3E-37 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDG60_12005 7a6e7af267e1da7597deba80abb3c4e9 259 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 3.0E-6 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_12005 7a6e7af267e1da7597deba80abb3c4e9 259 Pfam PF00970 Oxidoreductase FAD-binding domain 15 98 2.8E-10 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_12005 7a6e7af267e1da7597deba80abb3c4e9 259 Gene3D G3DSA:2.40.30.10 1 96 7.4E-29 T 23-10-2018 CDG60_12005 7a6e7af267e1da7597deba80abb3c4e9 259 SUPERFAMILY SSF63380 7 99 4.12E-25 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_12005 7a6e7af267e1da7597deba80abb3c4e9 259 Gene3D G3DSA:3.40.50.80 100 255 1.6E-37 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_12005 7a6e7af267e1da7597deba80abb3c4e9 259 SUPERFAMILY SSF52343 102 257 4.19E-36 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 SUPERFAMILY SSF51735 132 308 3.07E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 SUPERFAMILY SSF55347 292 455 7.44E-55 T 23-10-2018 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 Gene3D G3DSA:3.30.360.10 291 456 2.4E-115 T 23-10-2018 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 23-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 SMART SM00846 131 292 1.0E-53 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 3.6E-22 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 2.4E-47 T 23-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 Gene3D G3DSA:3.40.50.720 133 467 2.4E-115 T 23-10-2018 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 410 425 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07040 46dca2397eda82632eb7b67ddca7ad58 485 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 1.3E-112 T 23-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 SUPERFAMILY SSF53850 93 291 3.41E-31 T 23-10-2018 CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 Gene3D G3DSA:3.40.190.10 163 267 7.8E-50 T 23-10-2018 CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 Gene3D G3DSA:1.10.10.10 1 93 1.6E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 Pfam PF03466 LysR substrate binding domain 89 290 1.1E-32 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 Gene3D G3DSA:3.40.190.10 94 291 7.8E-50 T 23-10-2018 CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.9E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 SUPERFAMILY SSF46785 1 86 1.89E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.5E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.5E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_02985 09f2e7d15095f152ebca49048b8738fd 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.5E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_10885 889961f79863b9d45602151ceafac7d0 414 Gene3D G3DSA:2.30.40.10 10 412 4.9E-82 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_10885 889961f79863b9d45602151ceafac7d0 414 SUPERFAMILY SSF51338 5 412 2.59E-12 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_10885 889961f79863b9d45602151ceafac7d0 414 Gene3D G3DSA:3.20.20.140 56 367 4.9E-82 T 23-10-2018 CDG60_10885 889961f79863b9d45602151ceafac7d0 414 SUPERFAMILY SSF51556 56 367 1.76E-69 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_10885 889961f79863b9d45602151ceafac7d0 414 Pfam PF01979 Amidohydrolase family 149 367 2.3E-5 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG60_16150 a8206e13e0af29f4d913924abb471472 634 SUPERFAMILY SSF52922 489 625 1.83E-27 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG60_16150 a8206e13e0af29f4d913924abb471472 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 18 625 3.3E-235 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_16150 a8206e13e0af29f4d913924abb471472 634 Gene3D G3DSA:3.40.50.920 503 630 4.3E-35 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG60_16150 a8206e13e0af29f4d913924abb471472 634 SUPERFAMILY SSF52518 12 378 1.97E-75 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_16150 a8206e13e0af29f4d913924abb471472 634 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 23-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_16150 a8206e13e0af29f4d913924abb471472 634 Pfam PF02780 Transketolase, C-terminal domain 506 619 6.3E-25 T 23-10-2018 IPR033248 Transketolase, C-terminal domain CDG60_16150 a8206e13e0af29f4d913924abb471472 634 SMART SM00861 316 480 1.1E-68 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG60_16150 a8206e13e0af29f4d913924abb471472 634 SUPERFAMILY SSF52518 314 499 2.09E-58 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_16150 a8206e13e0af29f4d913924abb471472 634 Pfam PF02779 Transketolase, pyrimidine binding domain 316 476 8.5E-39 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG60_16150 a8206e13e0af29f4d913924abb471472 634 Gene3D G3DSA:3.40.50.970 314 488 2.7E-68 T 23-10-2018 CDG60_16150 a8206e13e0af29f4d913924abb471472 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 15 628 41.598 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_16150 a8206e13e0af29f4d913924abb471472 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 16 284 1.3E-103 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_16495 d6b208d6c7d77481aa2ba824336a54b7 345 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 6.6E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16495 d6b208d6c7d77481aa2ba824336a54b7 345 Pfam PF16074 Type IV Pilus-assembly protein W 206 337 1.4E-12 T 23-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CDG60_16495 d6b208d6c7d77481aa2ba824336a54b7 345 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 3.3E-6 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16495 d6b208d6c7d77481aa2ba824336a54b7 345 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 SUPERFAMILY SSF50249 2 69 4.29E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 2.8E-27 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 Gene3D G3DSA:2.40.50.140 1 70 8.9E-27 T 23-10-2018 CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 PRINTS PR00050 Cold shock protein signature 7 22 6.9E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 PRINTS PR00050 Cold shock protein signature 27 36 6.9E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 PRINTS PR00050 Cold shock protein signature 42 60 6.9E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 SMART SM00357 6 69 6.9E-27 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 23-10-2018 IPR019844 Cold-shock conserved site CDG60_07745 546d14ff264e4d85aa69b6a020abfbc8 70 PIRSF PIRSF002599 1 70 6.9E-22 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 CDG60_07260 35063704370f54017909f163e05f2f8e 338 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 11 332 2.0E-134 T 23-10-2018 IPR022462 Lysine-2,3-aminomutase-like CDG60_07260 35063704370f54017909f163e05f2f8e 338 PIRSF PIRSF004911 4 337 4.5E-106 T 23-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CDG60_07260 35063704370f54017909f163e05f2f8e 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 8 325 3.2E-95 T 23-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CDG60_07260 35063704370f54017909f163e05f2f8e 338 Pfam PF13394 4Fe-4S single cluster domain 114 172 2.0E-5 T 23-10-2018 CDG60_07260 35063704370f54017909f163e05f2f8e 338 SUPERFAMILY SSF102114 100 322 1.15E-20 T 23-10-2018 CDG60_07260 35063704370f54017909f163e05f2f8e 338 Gene3D G3DSA:3.20.20.70 47 331 7.6E-82 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_07395 48de49f6d9e7a84396b69da36f6a2b5a 339 SMART SM00342 251 334 3.3E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_07395 48de49f6d9e7a84396b69da36f6a2b5a 339 Pfam PF12833 Helix-turn-helix domain 261 335 1.7E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_07395 48de49f6d9e7a84396b69da36f6a2b5a 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 206 1.6E-33 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_07395 48de49f6d9e7a84396b69da36f6a2b5a 339 Gene3D G3DSA:1.10.10.60 238 339 5.5E-24 T 23-10-2018 CDG60_07395 48de49f6d9e7a84396b69da36f6a2b5a 339 SUPERFAMILY SSF46689 287 336 3.32E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_04920 ec6808f0ce5f95fc45e3bf4b112cd25b 387 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 243 252 - T 23-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 CDG60_04920 ec6808f0ce5f95fc45e3bf4b112cd25b 387 SUPERFAMILY SSF53383 5 387 1.68E-87 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_04920 ec6808f0ce5f95fc45e3bf4b112cd25b 387 Gene3D G3DSA:3.90.1150.10 35 384 5.5E-112 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_04920 ec6808f0ce5f95fc45e3bf4b112cd25b 387 Pfam PF00155 Aminotransferase class I and II 41 385 5.2E-54 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_04920 ec6808f0ce5f95fc45e3bf4b112cd25b 387 Gene3D G3DSA:3.40.640.10 56 296 5.5E-112 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 Gene3D G3DSA:2.40.110.10 142 239 3.9E-27 T 23-10-2018 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 26 415 1.2E-189 T 23-10-2018 IPR023922 Sulphate-starvation-induced SfnB CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 Gene3D G3DSA:1.10.540.10 33 141 4.1E-22 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 SUPERFAMILY SSF56645 38 240 1.31E-43 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 SUPERFAMILY SSF47203 250 414 1.11E-23 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 259 391 1.6E-22 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 PIRSF PIRSF016578 21 404 4.7E-30 T 23-10-2018 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 149 232 3.6E-8 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 Gene3D G3DSA:1.20.140.10 240 413 6.9E-55 T 23-10-2018 CDG60_14280 4a8b51b5fbaab82413174baeadab8c68 416 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 138 3.8E-10 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 Gene3D G3DSA:3.20.20.60 477 787 1.7E-102 T 23-10-2018 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 785 0.0 T 23-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 PIRSF PIRSF000854 2 792 0.0 T 23-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 SUPERFAMILY SSF56059 4 384 1.12E-102 T 23-10-2018 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 Gene3D G3DSA:3.30.470.20 193 356 9.4E-57 T 23-10-2018 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 4.6E-117 T 23-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 Gene3D G3DSA:3.30.1490.20 2 192 8.9E-71 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 23-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 2.0E-62 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 5.3E-26 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 Gene3D G3DSA:3.50.30.10 357 476 5.6E-42 T 23-10-2018 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 SUPERFAMILY SSF52009 347 466 1.07E-34 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CDG60_07335 94a1ed1c8b2a3e9b2247de2eb36b465e 792 SUPERFAMILY SSF51621 461 787 3.66E-99 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG60_12065 a8276a6b73aea7bfa923e66667f24a6a 297 PIRSF PIRSF007580 1 291 4.4E-71 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_12065 a8276a6b73aea7bfa923e66667f24a6a 297 Pfam PF10118 Predicted metal-dependent hydrolase 1 272 7.8E-62 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_10760 040262d311fdba6954c44386414bacf6 401 SUPERFAMILY SSF51246 328 398 8.47E-18 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG60_10760 040262d311fdba6954c44386414bacf6 401 SUPERFAMILY SSF52440 4 114 1.19E-28 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_10760 040262d311fdba6954c44386414bacf6 401 Pfam PF02222 ATP-grasp domain 125 303 1.3E-50 T 23-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDG60_10760 040262d311fdba6954c44386414bacf6 401 SUPERFAMILY SSF56059 115 321 2.12E-53 T 23-10-2018 CDG60_10760 040262d311fdba6954c44386414bacf6 401 Gene3D G3DSA:3.40.50.20 3 124 1.9E-49 T 23-10-2018 CDG60_10760 040262d311fdba6954c44386414bacf6 401 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 9 399 50.087 T 23-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CDG60_10760 040262d311fdba6954c44386414bacf6 401 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 15 398 2.2E-167 T 23-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CDG60_10760 040262d311fdba6954c44386414bacf6 401 Gene3D G3DSA:3.30.470.20 199 401 4.2E-60 T 23-10-2018 CDG60_10760 040262d311fdba6954c44386414bacf6 401 Gene3D G3DSA:3.30.1490.20 125 198 6.1E-31 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 23-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Pfam PF00005 ABC transporter 625 862 1.9E-11 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Gene3D G3DSA:1.20.1580.10 694 832 9.2E-141 T 23-10-2018 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 22.346 T 23-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Gene3D G3DSA:3.30.190.20 132 245 7.1E-247 T 23-10-2018 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Gene3D G3DSA:1.20.1580.10 92 493 7.1E-247 T 23-10-2018 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Gene3D G3DSA:3.40.50.300 8 596 7.1E-247 T 23-10-2018 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Gene3D G3DSA:3.40.50.300 619 938 9.2E-141 T 23-10-2018 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 Gene3D G3DSA:1.10.8.280 288 404 7.1E-247 T 23-10-2018 CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 SUPERFAMILY SSF52540 623 915 3.22E-53 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_17155 3c4092367204b79ef38194d86d2a957b 943 SUPERFAMILY SSF52540 6 570 2.26E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14100 bff42eeaabf69592377cd6617ce15889 399 Pfam PF05992 SbmA/BacA-like family 85 396 4.1E-155 T 23-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 Gene3D G3DSA:1.20.200.10 148 415 3.7E-108 T 23-10-2018 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 Gene3D G3DSA:1.10.40.30 416 465 1.4E-19 T 23-10-2018 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 PRINTS PR00149 Fumarate lyase superfamily signature 325 341 9.6E-28 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 PRINTS PR00149 Fumarate lyase superfamily signature 279 306 9.6E-28 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 9.6E-28 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 PRINTS PR00149 Fumarate lyase superfamily signature 188 206 9.6E-28 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 Pfam PF10415 Fumarase C C-terminus 416 468 1.1E-14 T 23-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 ProSitePatterns PS00163 Fumarate lyases signature. 325 334 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 Pfam PF00206 Lyase 19 350 2.1E-93 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 PRINTS PR00145 Argininosuccinate lyase family signature 183 203 4.7E-5 T 23-10-2018 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 PRINTS PR00145 Argininosuccinate lyase family signature 142 164 4.7E-5 T 23-10-2018 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 PRINTS PR00145 Argininosuccinate lyase family signature 325 341 4.7E-5 T 23-10-2018 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 10 469 7.2E-211 T 23-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 SUPERFAMILY SSF48557 9 468 2.04E-132 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG60_08040 97a3166db69f76a5d39c1b70b7f33d7c 485 Gene3D G3DSA:1.10.275.10 10 147 4.3E-54 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 313 3.4E-91 T 23-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 Gene3D G3DSA:3.10.25.10 214 317 9.2E-30 T 23-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 SUPERFAMILY SSF50486 212 318 2.75E-27 T 23-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 Pfam PF02911 Formyl transferase, C-terminal domain 211 310 7.9E-25 T 23-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 313 34.974 T 23-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 Gene3D G3DSA:3.40.50.170 1 213 2.0E-74 T 23-10-2018 CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 SUPERFAMILY SSF53328 1 187 6.8E-59 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_17845 5de45044aaab6e90b3c27846e85ffeb5 319 Pfam PF00551 Formyl transferase 2 185 3.7E-47 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG60_07275 91506d7cab5ebe1a1d0cd07e97ffd09f 100 Pfam PF04328 Selenoprotein, putative 38 100 4.3E-23 T 23-10-2018 IPR007423 Selenoprotein, putative CDG60_05190 88472112655e09eefa0aad4b49fcf9ad 267 SUPERFAMILY SSF53271 43 157 8.42E-7 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_13065 f12dbdcba91ade383d3458e458566c0c 229 Gene3D G3DSA:2.60.120.10 9 227 5.8E-78 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_13065 f12dbdcba91ade383d3458e458566c0c 229 PIRSF PIRSF006232 1 226 1.7E-43 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG60_13065 f12dbdcba91ade383d3458e458566c0c 229 SUPERFAMILY SSF51182 4 227 1.49E-61 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_13065 f12dbdcba91ade383d3458e458566c0c 229 Pfam PF02678 Pirin 13 119 8.6E-28 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG60_13065 f12dbdcba91ade383d3458e458566c0c 229 Gene3D G3DSA:2.60.120.10 12 135 5.8E-78 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_11660 e6bda78486a9da4ee1785b53bb2420c1 234 Pfam PF00550 Phosphopantetheine attachment site 167 228 2.4E-9 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain CDG60_11660 e6bda78486a9da4ee1785b53bb2420c1 234 Gene3D G3DSA:1.10.1200.10 158 233 2.1E-12 T 23-10-2018 IPR036736 ACP-like superfamily CDG60_11660 e6bda78486a9da4ee1785b53bb2420c1 234 SUPERFAMILY SSF47336 170 233 3.53E-9 T 23-10-2018 IPR036736 ACP-like superfamily CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 Pfam PF00325 Bacterial regulatory proteins, crp family 176 207 1.3E-14 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 7.1E-9 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 7.1E-9 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 SMART SM00419 170 218 1.4E-13 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 SUPERFAMILY SSF51206 20 147 1.44E-29 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 Gene3D G3DSA:2.60.120.10 21 148 1.4E-40 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 Gene3D G3DSA:1.10.10.10 149 217 2.9E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 SUPERFAMILY SSF46785 149 218 6.08E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 8.3E-21 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 SMART SM00100 9 132 5.7E-20 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 23-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CDG60_10955 78af1b53dce8e0e8d445deb914ed0fc5 235 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 81 99 - T 23-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site CDG60_11235 c51c721076a14d221f15bfaa7cf53674 291 Pfam PF03180 NLPA lipoprotein 45 278 8.5E-65 T 23-10-2018 IPR004872 Lipoprotein NlpA family CDG60_11235 c51c721076a14d221f15bfaa7cf53674 291 SUPERFAMILY SSF53850 39 280 1.88E-66 T 23-10-2018 CDG60_11235 c51c721076a14d221f15bfaa7cf53674 291 Gene3D G3DSA:3.40.190.10 43 271 1.1E-75 T 23-10-2018 CDG60_11235 c51c721076a14d221f15bfaa7cf53674 291 Gene3D G3DSA:3.40.190.10 119 230 1.1E-75 T 23-10-2018 CDG60_10425 289d59e06fe1feda2e22cca5f21dd21e 175 Gene3D G3DSA:2.30.30.100 1 69 1.5E-31 T 23-10-2018 CDG60_10425 289d59e06fe1feda2e22cca5f21dd21e 175 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.6 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDG60_10425 289d59e06fe1feda2e22cca5f21dd21e 175 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.1E-29 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDG60_10425 289d59e06fe1feda2e22cca5f21dd21e 175 SUPERFAMILY SSF50182 7 67 3.27E-23 T 23-10-2018 IPR010920 LSM domain superfamily CDG60_10425 289d59e06fe1feda2e22cca5f21dd21e 175 Pfam PF17209 Hfq protein 7 68 9.7E-31 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDG60_16420 581000366221b6ca11d021300b27327e 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 7.8E-11 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16420 581000366221b6ca11d021300b27327e 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 7.8E-11 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16420 581000366221b6ca11d021300b27327e 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.7E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16420 581000366221b6ca11d021300b27327e 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.4E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16420 581000366221b6ca11d021300b27327e 161 SUPERFAMILY SSF54523 8 137 1.15E-19 T 23-10-2018 CDG60_16420 581000366221b6ca11d021300b27327e 161 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16420 581000366221b6ca11d021300b27327e 161 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 119 7.1E-9 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG60_16420 581000366221b6ca11d021300b27327e 161 Gene3D G3DSA:3.30.700.10 8 154 2.1E-22 T 23-10-2018 CDG60_00005 41d205d0269f70c4ebf9a13e6feb5193 295 Gene3D G3DSA:1.10.10.10 134 225 2.5E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_00005 41d205d0269f70c4ebf9a13e6feb5193 295 SUPERFAMILY SSF46785 122 220 1.77E-30 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_00005 41d205d0269f70c4ebf9a13e6feb5193 295 SUPERFAMILY SSF46785 2 122 3.16E-31 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_00005 41d205d0269f70c4ebf9a13e6feb5193 295 Pfam PF01051 Initiator Replication protein 3 217 1.1E-56 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG60_00005 41d205d0269f70c4ebf9a13e6feb5193 295 Gene3D G3DSA:1.10.10.10 1 133 1.2E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 SMART SM00729 135 360 0.0097 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 30 388 74.888 T 23-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 Gene3D G3DSA:1.10.150.530 30 91 2.2E-26 T 23-10-2018 CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 393 7.3E-143 T 23-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 Pfam PF04055 Radical SAM superfamily 140 317 7.9E-17 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 Gene3D G3DSA:3.20.20.70 92 373 3.4E-107 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 PIRSF PIRSF006004 22 402 9.1E-148 T 23-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 CDG60_15165 c3759af2aa3b2acfb4b53743f8b1a0b9 411 SUPERFAMILY SSF102114 135 356 3.01E-16 T 23-10-2018 CDG60_13055 a526b2e8c3ff52208e00792eff928fe6 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 351 1.6E-137 T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG60_13055 a526b2e8c3ff52208e00792eff928fe6 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG60_13055 a526b2e8c3ff52208e00792eff928fe6 357 SUPERFAMILY SSF51726 1 355 1.03E-117 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG60_13055 a526b2e8c3ff52208e00792eff928fe6 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 352 49.024 T 23-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG60_13055 a526b2e8c3ff52208e00792eff928fe6 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG60_13055 a526b2e8c3ff52208e00792eff928fe6 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 350 4.0E-135 T 23-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG60_13055 a526b2e8c3ff52208e00792eff928fe6 357 Gene3D G3DSA:3.20.20.210 1 357 2.6E-163 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG60_15655 a0d1be570065e9a24cea373fea7aca44 208 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 206 5.0E-55 T 23-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CDG60_15655 a0d1be570065e9a24cea373fea7aca44 208 Pfam PF01725 Ham1 family 12 203 2.7E-53 T 23-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CDG60_15655 a0d1be570065e9a24cea373fea7aca44 208 SUPERFAMILY SSF52972 7 206 1.49E-65 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG60_15655 a0d1be570065e9a24cea373fea7aca44 208 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 208 48.405 T 23-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 CDG60_15655 a0d1be570065e9a24cea373fea7aca44 208 Gene3D G3DSA:3.90.950.10 8 208 1.3E-69 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG60_13875 2556056df93e6e4c9afd31c749c23b35 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 179 7.5E-68 T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13875 2556056df93e6e4c9afd31c749c23b35 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 25 179 42.798 T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13875 2556056df93e6e4c9afd31c749c23b35 225 SUPERFAMILY SSF56770 44 182 1.57E-63 T 23-10-2018 CDG60_13875 2556056df93e6e4c9afd31c749c23b35 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 172 3.2E-22 T 23-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13875 2556056df93e6e4c9afd31c749c23b35 225 Gene3D G3DSA:3.40.50.12280 19 190 8.2E-70 T 23-10-2018 CDG60_13875 2556056df93e6e4c9afd31c749c23b35 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 146 162 - T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 Pfam PF00742 Homoserine dehydrogenase 136 314 6.1E-66 T 23-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 128 9.5E-20 T 23-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 SUPERFAMILY SSF55021 351 421 1.67E-12 T 23-10-2018 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 PIRSF PIRSF000098 1 431 4.6E-162 T 23-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 SUPERFAMILY SSF55347 136 301 3.53E-54 T 23-10-2018 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 Gene3D G3DSA:3.30.360.10 135 347 1.7E-161 T 23-10-2018 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 Gene3D G3DSA:3.40.50.720 4 339 1.7E-161 T 23-10-2018 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 182 204 - T 23-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 SUPERFAMILY SSF51735 2 157 2.23E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 Gene3D G3DSA:3.30.70.260 348 420 1.7E-161 T 23-10-2018 CDG60_02035 2b804501b0f3266e532839ae4073e61d 434 Pfam PF01842 ACT domain 353 418 1.2E-12 T 23-10-2018 IPR002912 ACT domain CDG60_13095 30318e6ffb756f790300c19537f1c389 408 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 107 398 2.6E-87 T 23-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CDG60_13095 30318e6ffb756f790300c19537f1c389 408 Gene3D G3DSA:3.60.120.10 16 407 2.6E-111 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG60_13095 30318e6ffb756f790300c19537f1c389 408 SUPERFAMILY SSF56322 76 400 9.29E-86 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG60_13095 30318e6ffb756f790300c19537f1c389 408 Pfam PF00425 chorismate binding enzyme 133 390 3.1E-70 T 23-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 SUPERFAMILY SSF56935 1389 1677 9.44E-6 T 23-10-2018 CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 SUPERFAMILY SSF49464 449 532 7.06E-8 T 23-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 Gene3D G3DSA:2.60.40.740 572 702 4.8E-5 T 23-10-2018 CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 Gene3D G3DSA:2.60.40.10 718 817 1.9E-9 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 Pfam PF17210 SdrD B-like domain 720 777 5.2E-10 T 23-10-2018 IPR033764 SD-repeat containing protein, B domain CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 593 640 9.5E-11 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 Gene3D G3DSA:2.60.40.1120 448 546 3.0E-7 T 23-10-2018 CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 Pfam PF01345 Domain of unknown function DUF11 594 681 2.0E-10 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_12880 d2e16129be3af3b3915a6fd68af80730 1972 SUPERFAMILY SSF117074 707 778 9.94E-9 T 23-10-2018 CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 Pfam PF01782 RimM N-terminal domain 13 95 1.4E-22 T 23-10-2018 IPR002676 RimM, N-terminal GO:0006364 CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 SUPERFAMILY SSF50447 10 98 2.26E-21 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 SUPERFAMILY SSF50346 104 179 2.16E-18 T 23-10-2018 IPR011033 PRC-barrel-like superfamily CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 Pfam PF05239 PRC-barrel domain 102 177 1.3E-7 T 23-10-2018 IPR027275 PRC-barrel domain CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 179 6.9E-44 T 23-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 182 22.282 T 23-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 Gene3D G3DSA:2.30.30.240 100 182 3.6E-32 T 23-10-2018 CDG60_16465 6058837eb17c8cab21c9657571d3590e 182 Gene3D G3DSA:2.40.30.60 1 98 2.4E-36 T 23-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 CDG60_07910 3d1f2bb1e6fc2ee4b152a7abd8c6546d 624 SUPERFAMILY SSF49785 46 150 1.21E-5 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily CDG60_07910 3d1f2bb1e6fc2ee4b152a7abd8c6546d 624 Gene3D G3DSA:3.30.565.10 499 622 9.1E-18 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_07910 3d1f2bb1e6fc2ee4b152a7abd8c6546d 624 SMART SM00387 529 624 1.0E-5 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_07910 3d1f2bb1e6fc2ee4b152a7abd8c6546d 624 Pfam PF07695 7TM diverse intracellular signalling 186 381 1.8E-7 T 23-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 CDG60_07910 3d1f2bb1e6fc2ee4b152a7abd8c6546d 624 Gene3D G3DSA:2.60.120.260 33 183 1.0E-5 T 23-10-2018 IPR008979 Galactose-binding-like domain superfamily CDG60_07910 3d1f2bb1e6fc2ee4b152a7abd8c6546d 624 SUPERFAMILY SSF55874 529 614 4.06E-9 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_04795 32e6a7f362b6acb3dc00384f2ce8aaea 146 Gene3D G3DSA:3.10.450.50 8 145 2.7E-29 T 23-10-2018 CDG60_04795 32e6a7f362b6acb3dc00384f2ce8aaea 146 Pfam PF13474 SnoaL-like domain 20 134 9.0E-17 T 23-10-2018 IPR037401 SnoaL-like domain CDG60_04795 32e6a7f362b6acb3dc00384f2ce8aaea 146 SUPERFAMILY SSF54427 9 133 4.16E-20 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_00635 ab7846302bb90563e7ab2dbed56449c8 369 Gene3D G3DSA:2.40.420.20 263 355 2.4E-24 T 23-10-2018 CDG60_00635 ab7846302bb90563e7ab2dbed56449c8 369 Gene3D G3DSA:2.40.50.100 45 189 2.0E-65 T 23-10-2018 CDG60_00635 ab7846302bb90563e7ab2dbed56449c8 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 272 1.3E-18 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG60_00635 ab7846302bb90563e7ab2dbed56449c8 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 21 354 3.2E-77 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG60_00635 ab7846302bb90563e7ab2dbed56449c8 369 Gene3D G3DSA:2.40.30.170 39 262 2.0E-65 T 23-10-2018 CDG60_00635 ab7846302bb90563e7ab2dbed56449c8 369 Gene3D G3DSA:1.10.287.470 80 153 2.0E-65 T 23-10-2018 CDG60_00635 ab7846302bb90563e7ab2dbed56449c8 369 SUPERFAMILY SSF111369 35 277 4.71E-69 T 23-10-2018 CDG60_00900 2f5ef9d0f680a783e747c9795c37a2eb 161 SUPERFAMILY SSF54534 14 150 2.36E-34 T 23-10-2018 CDG60_00900 2f5ef9d0f680a783e747c9795c37a2eb 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 13 147 2.0E-17 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG60_00900 2f5ef9d0f680a783e747c9795c37a2eb 161 Gene3D G3DSA:3.10.50.40 12 160 6.5E-37 T 23-10-2018 CDG60_16770 afa99440c3346e688296aa0e75806039 858 SUPERFAMILY SSF56601 217 782 3.7E-122 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_16770 afa99440c3346e688296aa0e75806039 858 SUPERFAMILY SSF53955 54 260 5.91E-73 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_16770 afa99440c3346e688296aa0e75806039 858 Pfam PF17092 Penicillin-binding protein OB-like domain 325 419 2.4E-19 T 23-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16770 afa99440c3346e688296aa0e75806039 858 Gene3D G3DSA:1.10.3810.10 55 249 9.7E-73 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16770 afa99440c3346e688296aa0e75806039 858 Pfam PF00912 Transglycosylase 61 235 3.0E-61 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16770 afa99440c3346e688296aa0e75806039 858 Gene3D G3DSA:2.40.50.140 322 416 1.8E-28 T 23-10-2018 CDG60_16770 afa99440c3346e688296aa0e75806039 858 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 74 755 1.3E-178 T 23-10-2018 CDG60_16770 afa99440c3346e688296aa0e75806039 858 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 593 1.5E-25 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG60_00035 77bbcca8917aab617e5ad436d4d2b950 203 SUPERFAMILY SSF53041 4 153 2.49E-28 T 23-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDG60_00035 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF00239 Resolvase, N terminal domain 8 153 2.3E-25 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG60_00035 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG60_00035 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF02796 Helix-turn-helix domain of resolvase 161 199 3.5E-7 T 23-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CDG60_00035 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG60_00035 77bbcca8917aab617e5ad436d4d2b950 203 SMART SM00857 6 157 7.8E-35 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG60_00035 77bbcca8917aab617e5ad436d4d2b950 203 Gene3D G3DSA:3.40.50.1390 7 157 5.8E-29 T 23-10-2018 CDG60_17000 aa2f07aab2b0fb20da5154e2d2e34dbb 208 Gene3D G3DSA:2.40.50.140 1 84 7.9E-12 T 23-10-2018 CDG60_17000 aa2f07aab2b0fb20da5154e2d2e34dbb 208 SMART SM00357 5 69 2.8E-6 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG60_17000 aa2f07aab2b0fb20da5154e2d2e34dbb 208 SUPERFAMILY SSF50249 8 70 2.45E-10 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_17000 aa2f07aab2b0fb20da5154e2d2e34dbb 208 Pfam PF06961 Protein of unknown function (DUF1294) 127 181 2.7E-23 T 23-10-2018 IPR010718 Protein of unknown function DUF1294 CDG60_17000 aa2f07aab2b0fb20da5154e2d2e34dbb 208 Pfam PF00313 'Cold-shock' DNA-binding domain 8 67 5.2E-10 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Pfam PF01434 Peptidase family M41 387 593 7.4E-78 T 23-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Gene3D G3DSA:3.40.50.300 141 327 5.0E-70 T 23-10-2018 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Gene3D G3DSA:1.10.8.60 328 401 1.6E-27 T 23-10-2018 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Gene3D G3DSA:2.40.50.920 25 101 7.6E-13 T 23-10-2018 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 615 629 1.0E-5 T 23-10-2018 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 197 216 1.0E-5 T 23-10-2018 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 SUPERFAMILY SSF140990 407 602 3.79E-73 T 23-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 SUPERFAMILY SSF52540 147 395 1.12E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 36.622 T 23-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 SMART SM00382 189 328 1.2E-25 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 1.4E-45 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 23-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Gene3D G3DSA:1.20.58.760 402 600 2.2E-71 T 23-10-2018 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 594 4.5E-233 T 23-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CDG60_05770 6b92c154a638fd67b6c316d178d74e11 629 Pfam PF06480 FtsH Extracellular 9 89 1.0E-9 T 23-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CDG60_13115 d9bc3a42210a56e67e0e8691ff8a3ff8 330 Gene3D G3DSA:3.40.50.1980 162 329 2.7E-47 T 23-10-2018 CDG60_13115 d9bc3a42210a56e67e0e8691ff8a3ff8 330 SUPERFAMILY SSF53807 54 321 7.06E-61 T 23-10-2018 CDG60_13115 d9bc3a42210a56e67e0e8691ff8a3ff8 330 Pfam PF01497 Periplasmic binding protein 97 304 4.8E-34 T 23-10-2018 IPR002491 ABC transporter periplasmic binding domain CDG60_13115 d9bc3a42210a56e67e0e8691ff8a3ff8 330 Gene3D G3DSA:3.40.50.1980 48 158 4.4E-29 T 23-10-2018 CDG60_14035 0fe2e3c0a000c8773222b656845ad771 492 ProSitePatterns PS00571 Amidases signature. 152 183 - T 23-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CDG60_14035 0fe2e3c0a000c8773222b656845ad771 492 Gene3D G3DSA:3.90.1300.10 3 487 3.3E-199 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_14035 0fe2e3c0a000c8773222b656845ad771 492 Pfam PF01425 Amidase 25 468 3.4E-160 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_14035 0fe2e3c0a000c8773222b656845ad771 492 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 479 90.506 T 23-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_14035 0fe2e3c0a000c8773222b656845ad771 492 SUPERFAMILY SSF75304 1 478 1.96E-163 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_14035 0fe2e3c0a000c8773222b656845ad771 492 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 479 2.5E-183 T 23-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG60_08460 fcb0d3272d557b95be5fc95ef17bc69d 255 SUPERFAMILY SSF51735 15 223 2.19E-22 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_08460 fcb0d3272d557b95be5fc95ef17bc69d 255 Gene3D G3DSA:3.40.50.720 2 253 7.3E-23 T 23-10-2018 CDG60_08460 fcb0d3272d557b95be5fc95ef17bc69d 255 Pfam PF01370 NAD dependent epimerase/dehydratase family 16 197 2.2E-11 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 Gene3D G3DSA:3.30.110.10 88 183 1.2E-36 T 23-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 13 182 28.545 T 23-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 19 88 6.8E-27 T 23-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 Gene3D G3DSA:3.10.20.80 14 87 2.4E-27 T 23-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 182 3.9E-65 T 23-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 SUPERFAMILY SSF54364 17 90 3.14E-26 T 23-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 180 2.6E-36 T 23-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CDG60_15045 24e488db1e5d50f0cf18967991abefdb 183 SUPERFAMILY SSF55200 95 183 1.96E-32 T 23-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 Gene3D G3DSA:1.10.1140.10 349 464 1.0E-57 T 23-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 Gene3D G3DSA:3.40.50.300 74 348 3.1E-112 T 23-10-2018 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 SMART SM00382 140 331 3.2E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 SUPERFAMILY SSF52540 75 352 1.77E-90 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 SUPERFAMILY SSF47917 349 463 6.54E-53 T 23-10-2018 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 Gene3D G3DSA:2.40.10.170 1 73 1.8E-30 T 23-10-2018 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.4E-20 T 23-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 23-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 SUPERFAMILY SSF50615 2 73 1.12E-25 T 23-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 2.8E-253 T 23-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.5E-62 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01585 c5132678c51f70cbf72be352d5b47b8f 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.834 T 23-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Pfam PF03949 Malic enzyme, NAD binding domain 166 357 2.1E-20 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 SMART SM00919 164 397 4.5E-123 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Pfam PF00390 Malic enzyme, N-terminal domain 115 152 1.8E-6 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Pfam PF00390 Malic enzyme, N-terminal domain 21 114 9.5E-21 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 PIRSF PIRSF036684 1 756 0.0 T 23-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Gene3D G3DSA:3.40.50.10750 569 724 5.3E-93 T 23-10-2018 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Gene3D G3DSA:3.40.50.720 162 441 7.0E-80 T 23-10-2018 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 SUPERFAMILY SSF51735 164 448 6.57E-84 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 SMART SM01274 19 152 1.1E-81 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Gene3D G3DSA:3.40.50.10950 442 748 5.3E-93 T 23-10-2018 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 SUPERFAMILY SSF53659 426 751 2.1E-86 T 23-10-2018 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 426 748 1.6E-94 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 Gene3D G3DSA:3.40.50.10380 1 161 2.3E-70 T 23-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CDG60_06095 8d7e15bbc5c2b3765744b2c359f92aa9 759 SUPERFAMILY SSF53223 10 162 6.4E-53 T 23-10-2018 CDG60_14015 52ba008a6793fa1a84edadc7934b8b56 163 Pfam PF04093 rod shape-determining protein MreD 18 159 6.4E-13 T 23-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CDG60_14015 52ba008a6793fa1a84edadc7934b8b56 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 14 160 2.4E-24 T 23-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CDG60_13110 b590b66c73b13d0eb22e4223f970612f 269 Pfam PF08021 Siderophore-interacting FAD-binding domain 13 128 1.8E-31 T 23-10-2018 IPR013113 FAD-binding 9, siderophore-interacting CDG60_13110 b590b66c73b13d0eb22e4223f970612f 269 Gene3D G3DSA:2.40.30.10 2 128 2.8E-32 T 23-10-2018 CDG60_13110 b590b66c73b13d0eb22e4223f970612f 269 Gene3D G3DSA:3.40.50.80 130 268 6.2E-32 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_13110 b590b66c73b13d0eb22e4223f970612f 269 Pfam PF04954 Siderophore-interacting protein 136 251 1.3E-25 T 23-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain CDG60_13110 b590b66c73b13d0eb22e4223f970612f 269 SUPERFAMILY SSF63380 7 131 1.0E-10 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_07280 45a9bd6184a37d23a147138196f92426 320 Gene3D G3DSA:3.40.50.300 42 208 3.4E-41 T 23-10-2018 CDG60_07280 45a9bd6184a37d23a147138196f92426 320 Gene3D G3DSA:1.10.8.300 222 319 7.2E-20 T 23-10-2018 CDG60_07280 45a9bd6184a37d23a147138196f92426 320 SUPERFAMILY SSF52540 43 305 1.13E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07280 45a9bd6184a37d23a147138196f92426 320 PIRSF PIRSF002849 4 319 2.9E-114 T 23-10-2018 CDG60_07280 45a9bd6184a37d23a147138196f92426 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 61 191 1.4E-58 T 23-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 158 172 - T 23-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 17 491 1.7E-163 T 23-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 16 492 36.998 T 23-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 Gene3D G3DSA:1.10.10.410 432 492 1.7E-24 T 23-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 Pfam PF02637 GatB domain 342 491 7.6E-50 T 23-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 Gene3D G3DSA:1.10.150.380 310 430 4.8E-33 T 23-10-2018 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 SUPERFAMILY SSF55931 18 309 6.34E-114 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 SUPERFAMILY SSF89095 310 418 6.15E-31 T 23-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 SMART SM00845 341 491 1.7E-75 T 23-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CDG60_14040 6bffbcf55daceaeabf1c332d436b544c 492 Pfam PF02934 GatB/GatE catalytic domain 19 302 9.1E-108 T 23-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CDG60_07410 38cdf0bccd3d2a71b914509d135c5f2f 550 Gene3D G3DSA:3.40.50.12780 17 435 4.2E-88 T 23-10-2018 CDG60_07410 38cdf0bccd3d2a71b914509d135c5f2f 550 Pfam PF00501 AMP-binding enzyme 41 440 2.4E-68 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG60_07410 38cdf0bccd3d2a71b914509d135c5f2f 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG60_07410 38cdf0bccd3d2a71b914509d135c5f2f 550 Gene3D G3DSA:3.30.300.30 436 547 2.1E-27 T 23-10-2018 CDG60_07410 38cdf0bccd3d2a71b914509d135c5f2f 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 529 7.2E-21 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG60_07410 38cdf0bccd3d2a71b914509d135c5f2f 550 SUPERFAMILY SSF56801 41 541 4.58E-126 T 23-10-2018 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 Pfam PF04055 Radical SAM superfamily 187 361 7.3E-30 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 SMART SM00729 183 403 2.3E-59 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 Gene3D G3DSA:3.40.50.12160 32 165 5.6E-34 T 23-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 SUPERFAMILY SSF102114 166 409 6.41E-63 T 23-10-2018 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 187 207 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 Gene3D G3DSA:3.80.30.20 182 416 4.5E-81 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 33 471 7.5E-177 T 23-10-2018 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 32 477 69.835 T 23-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 33 471 2.6E-142 T 23-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 Pfam PF00919 Uncharacterized protein family UPF0004 33 133 1.8E-28 T 23-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CDG60_15495 b2f45a9515fdd2dd6a15dfcf17e537bd 484 Pfam PF01938 TRAM domain 415 476 1.6E-9 T 23-10-2018 IPR002792 TRAM domain CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 3.2E-19 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 3.2E-19 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 3.2E-19 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 3.2E-19 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 SUPERFAMILY SSF53738 264 372 9.42E-23 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Gene3D G3DSA:3.40.120.10 256 377 2.3E-32 T 23-10-2018 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 SUPERFAMILY SSF55957 393 464 5.23E-13 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 405 456 2.4E-5 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 376 1.3E-17 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 132 6.9E-26 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Gene3D G3DSA:3.30.310.50 378 468 1.2E-15 T 23-10-2018 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 SUPERFAMILY SSF53738 5 138 5.1E-28 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 258 2.0E-25 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Gene3D G3DSA:3.40.120.10 177 254 9.7E-26 T 23-10-2018 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 SUPERFAMILY SSF53738 161 260 2.83E-26 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_04635 b68619e96fc19b4f64bd538a5b462601 474 Gene3D G3DSA:3.40.120.10 2 144 2.7E-33 T 23-10-2018 CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 280 477 9.6E-15 T 23-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 Pfam PF11412 Disulphide bond corrector protein DsbC 30 138 1.1E-24 T 23-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 SUPERFAMILY SSF52833 564 670 1.09E-17 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 Gene3D G3DSA:3.40.30.10 545 673 1.1E-25 T 23-10-2018 CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 Pfam PF13899 Thioredoxin-like 568 644 3.6E-8 T 23-10-2018 CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 Gene3D G3DSA:2.60.40.1250 21 153 5.4E-34 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 ProSitePatterns PS00194 Thioredoxin family active site. 580 598 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG60_08995 8d7a0010a7373125ff5dbdb42238aaea 673 SUPERFAMILY SSF74863 28 137 1.01E-27 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 320 749 33.156 T 23-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 Gene3D G3DSA:3.65.10.10 332 542 2.1E-167 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 Pfam PF02153 Prephenate dehydrogenase 28 284 7.5E-71 T 23-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 SUPERFAMILY SSF55205 315 747 2.78E-130 T 23-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 SUPERFAMILY SSF51735 14 182 1.17E-44 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 Gene3D G3DSA:3.40.50.720 12 189 9.5E-52 T 23-10-2018 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 SUPERFAMILY SSF48179 187 294 1.47E-33 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 Gene3D G3DSA:3.65.10.10 324 740 2.1E-167 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 Gene3D G3DSA:1.10.3660.10 190 294 2.2E-35 T 23-10-2018 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 324 746 3.8E-130 T 23-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 ProSitePatterns PS00885 EPSP synthase signature 2. 653 671 - T 23-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 320 741 1.8E-118 T 23-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CDG60_11905 2480b4fc391f60337d018836eb5b275e 754 ProSitePatterns PS00104 EPSP synthase signature 1. 399 413 - T 23-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG60_08495 9e977a4006115c2eba633c719f58906f 160 SUPERFAMILY SSF46785 6 143 6.39E-41 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08495 9e977a4006115c2eba633c719f58906f 160 Pfam PF01638 HxlR-like helix-turn-helix 19 106 1.6E-23 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type CDG60_08495 9e977a4006115c2eba633c719f58906f 160 Gene3D G3DSA:1.10.10.10 3 159 2.5E-51 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_13650 e0de510b47cc7df745343267118d325b 376 Gene3D G3DSA:2.40.420.20 300 357 8.0E-47 T 23-10-2018 CDG60_13650 e0de510b47cc7df745343267118d325b 376 Pfam PF13437 HlyD family secretion protein 190 276 1.3E-14 T 23-10-2018 CDG60_13650 e0de510b47cc7df745343267118d325b 376 SUPERFAMILY SSF111369 68 292 1.83E-18 T 23-10-2018 CDG60_13650 e0de510b47cc7df745343267118d325b 376 Gene3D G3DSA:1.10.287.470 112 185 8.0E-47 T 23-10-2018 CDG60_13650 e0de510b47cc7df745343267118d325b 376 Gene3D G3DSA:2.40.30.170 64 299 8.0E-47 T 23-10-2018 CDG60_13650 e0de510b47cc7df745343267118d325b 376 Pfam PF13533 Biotin-lipoyl like 81 127 1.0E-7 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG60_13650 e0de510b47cc7df745343267118d325b 376 Gene3D G3DSA:2.40.50.100 78 224 8.0E-47 T 23-10-2018 CDG60_13650 e0de510b47cc7df745343267118d325b 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 357 4.3E-49 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG60_03115 b7a37e9b7204130b8e43d243d589198e 216 Gene3D G3DSA:3.40.50.1000 3 211 7.0E-70 T 23-10-2018 IPR023214 HAD superfamily CDG60_03115 b7a37e9b7204130b8e43d243d589198e 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 1.1E-33 T 23-10-2018 CDG60_03115 b7a37e9b7204130b8e43d243d589198e 216 Gene3D G3DSA:1.20.1440.100 15 88 7.0E-70 T 23-10-2018 CDG60_03115 b7a37e9b7204130b8e43d243d589198e 216 SUPERFAMILY SSF56784 1 209 9.57E-33 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_03115 b7a37e9b7204130b8e43d243d589198e 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 1.7E-21 T 23-10-2018 CDG60_03115 b7a37e9b7204130b8e43d243d589198e 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 1.5E-38 T 23-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 SUPERFAMILY SSF50104 6 119 2.11E-46 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 116 1.3E-49 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 PRINTS PR00061 Ribosomal protein L19 signature 37 66 2.9E-41 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.9E-41 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 PRINTS PR00061 Ribosomal protein L19 signature 7 36 2.9E-41 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 23-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 PIRSF PIRSF002191 1 124 4.7E-51 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 Pfam PF01245 Ribosomal protein L19 7 116 4.0E-50 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 Gene3D G3DSA:2.30.30.790 12 121 4.4E-15 T 23-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16455 d1f0958e89b6fb037f1e608e24325cda 124 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 30.711 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11245 b5b1c36dd1be71768c70c2bf9ec5eee2 231 SUPERFAMILY SSF161098 25 219 1.57E-41 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_11245 b5b1c36dd1be71768c70c2bf9ec5eee2 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 228 3.2E-17 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_11245 b5b1c36dd1be71768c70c2bf9ec5eee2 231 Gene3D G3DSA:1.10.3720.10 21 230 6.6E-43 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_16635 904ed596420a082091b539e5e9ded466 144 Pfam PF00114 Pilin (bacterial filament) 35 143 1.9E-14 T 23-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CDG60_16635 904ed596420a082091b539e5e9ded466 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16635 904ed596420a082091b539e5e9ded466 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.2E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16635 904ed596420a082091b539e5e9ded466 144 Gene3D G3DSA:3.30.700.10 7 144 1.2E-28 T 23-10-2018 CDG60_16635 904ed596420a082091b539e5e9ded466 144 SUPERFAMILY SSF54523 7 141 1.57E-22 T 23-10-2018 CDG60_16635 904ed596420a082091b539e5e9ded466 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.4E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 Gene3D G3DSA:3.30.870.10 320 501 2.5E-68 T 23-10-2018 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 Pfam PF02503 Polyphosphate kinase middle domain 126 323 8.2E-61 T 23-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 679 3.1E-149 T 23-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 SUPERFAMILY SSF143724 114 315 1.37E-62 T 23-10-2018 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 Hamap MF_00347 Polyphosphate kinase [ppk]. 8 684 27.501 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 11 680 4.8E-274 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 Pfam PF13089 Polyphosphate kinase N-terminal domain 11 117 1.1E-30 T 23-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 SUPERFAMILY SSF56024 317 493 2.43E-54 T 23-10-2018 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 PIRSF PIRSF015589 1 686 2.0E-267 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 Gene3D G3DSA:3.30.870.10 505 685 1.1E-64 T 23-10-2018 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 Gene3D G3DSA:3.30.1840.10 3 314 1.2E-98 T 23-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 SUPERFAMILY SSF140356 8 110 3.79E-31 T 23-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 CDG60_17650 91f4496d7b9ab7cd0ed716a93d28e660 686 SUPERFAMILY SSF56024 502 683 1.05E-68 T 23-10-2018 CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 Gene3D G3DSA:3.40.50.720 221 462 4.2E-58 T 23-10-2018 CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 Gene3D G3DSA:3.40.50.720 24 219 1.0E-50 T 23-10-2018 CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 SUPERFAMILY SSF51735 222 457 1.55E-52 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 226 400 3.9E-5 T 23-10-2018 CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 344 360 1.4E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 1.4E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 244 1.4E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 297 308 1.4E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 423 443 1.4E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 370 389 1.4E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 232 456 2.9E-42 T 23-10-2018 CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 350 358 1.0E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 370 389 1.0E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 297 308 1.0E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10850 fbb0a71d7f5ec90dd674129521c17d18 463 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 357 385 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_15375 081be3f60087daba736cec6c73358474 140 Gene3D G3DSA:3.10.129.10 1 140 4.4E-39 T 23-10-2018 CDG60_15375 081be3f60087daba736cec6c73358474 140 Pfam PF03061 Thioesterase superfamily 27 99 1.0E-17 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG60_15375 081be3f60087daba736cec6c73358474 140 SUPERFAMILY SSF54637 8 136 5.26E-35 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_12060 d994f646abb70912e488bcfc228a60a0 83 Gene3D G3DSA:3.30.70.20 2 81 8.7E-31 T 23-10-2018 CDG60_12060 d994f646abb70912e488bcfc228a60a0 83 Pfam PF13237 4Fe-4S dicluster domain 5 55 9.1E-7 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG60_12060 d994f646abb70912e488bcfc228a60a0 83 SUPERFAMILY SSF54862 4 74 1.12E-17 T 23-10-2018 CDG60_12060 d994f646abb70912e488bcfc228a60a0 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_08990 e186b63aaebc15b4f1faa66330af0b3c 277 SUPERFAMILY SSF52833 145 276 5.89E-36 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_08990 e186b63aaebc15b4f1faa66330af0b3c 277 ProSitePatterns PS00194 Thioredoxin family active site. 168 186 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG60_08990 e186b63aaebc15b4f1faa66330af0b3c 277 Pfam PF08534 Redoxin 140 262 1.0E-18 T 23-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CDG60_08990 e186b63aaebc15b4f1faa66330af0b3c 277 Gene3D G3DSA:3.40.30.10 130 277 1.5E-36 T 23-10-2018 CDG60_08990 e186b63aaebc15b4f1faa66330af0b3c 277 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 6 133 9.9E-9 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 SUPERFAMILY SSF82051 3 158 1.57E-55 T 23-10-2018 IPR036726 GTP1/OBG domain superfamily CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 Gene3D G3DSA:3.40.50.300 159 339 3.2E-47 T 23-10-2018 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 Pfam PF01018 GTP1/OBG 4 158 1.2E-57 T 23-10-2018 IPR006169 GTP1/OBG domain CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.0E-139 T 23-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 Gene3D G3DSA:2.70.210.12 1 158 2.8E-58 T 23-10-2018 IPR036726 GTP1/OBG domain superfamily CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.3E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.3E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.3E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.3E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 SUPERFAMILY SSF52540 151 338 3.24E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.38 T 23-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.0E-22 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_07060 0fa29f0dec0b1e711df84cf73f015815 403 PIRSF PIRSF002401 1 380 6.7E-134 T 23-10-2018 IPR035101 GTP-binding protein, Obg-type CDG60_05075 e3200827c36f744d2f932a865cc44946 942 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 716 738 - T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 Pfam PF03477 ATP cone domain 123 201 1.7E-5 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 Pfam PF03477 ATP cone domain 12 108 5.4E-17 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 264 874 3.0E-211 T 23-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 607 1.3E-46 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 PRINTS PR01183 Ribonucleotide reductase large chain signature 413 432 1.3E-46 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 558 1.3E-46 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 PRINTS PR01183 Ribonucleotide reductase large chain signature 727 754 1.3E-46 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 PRINTS PR01183 Ribonucleotide reductase large chain signature 650 673 1.3E-46 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 PRINTS PR01183 Ribonucleotide reductase large chain signature 622 644 1.3E-46 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 SUPERFAMILY SSF51998 337 874 4.27E-182 T 23-10-2018 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 Pfam PF02867 Ribonucleotide reductase, barrel domain 338 872 1.3E-183 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 Gene3D G3DSA:3.20.70.20 220 882 3.1E-247 T 23-10-2018 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 261 332 2.2E-18 T 23-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05075 e3200827c36f744d2f932a865cc44946 942 SUPERFAMILY SSF48168 128 336 1.57E-55 T 23-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 SUPERFAMILY SSF53850 92 292 1.96E-29 T 23-10-2018 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 Gene3D G3DSA:1.10.10.10 1 93 2.1E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_13470 73ec395470185a2209ba22de64099bf3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 Gene3D G3DSA:3.40.190.10 163 267 8.7E-46 T 23-10-2018 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 Gene3D G3DSA:3.40.190.10 94 290 8.7E-46 T 23-10-2018 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-23 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13470 73ec395470185a2209ba22de64099bf3 297 Pfam PF03466 LysR substrate binding domain 91 291 5.9E-30 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_13470 73ec395470185a2209ba22de64099bf3 297 SUPERFAMILY SSF46785 2 85 8.53E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_07725 7141a5b644e0eac4666072bdf57da57f 65 SUPERFAMILY SSF54285 3 64 5.72E-15 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDG60_07725 7141a5b644e0eac4666072bdf57da57f 65 Pfam PF02597 ThiS family 5 65 7.9E-11 T 23-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDG60_07725 7141a5b644e0eac4666072bdf57da57f 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 9.0E-18 T 23-10-2018 IPR010035 ThiS, thiamine-biosynthesis CDG60_07725 7141a5b644e0eac4666072bdf57da57f 65 Gene3D G3DSA:3.10.20.30 2 65 2.2E-17 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_12470 a510a36a2de349f59737a670a10db834 281 SUPERFAMILY SSF46689 173 223 6.27E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_12470 a510a36a2de349f59737a670a10db834 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 1.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_12470 a510a36a2de349f59737a670a10db834 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 1.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_12470 a510a36a2de349f59737a670a10db834 281 SUPERFAMILY SSF46689 225 272 1.03E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_12470 a510a36a2de349f59737a670a10db834 281 Pfam PF12833 Helix-turn-helix domain 195 272 5.1E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_12470 a510a36a2de349f59737a670a10db834 281 SMART SM00342 189 271 1.2E-30 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_12470 a510a36a2de349f59737a670a10db834 281 SUPERFAMILY SSF51215 30 155 1.7E-18 T 23-10-2018 IPR037923 Transcription regulator HTH-like CDG60_12470 a510a36a2de349f59737a670a10db834 281 Gene3D G3DSA:1.10.10.60 225 275 3.2E-15 T 23-10-2018 CDG60_12470 a510a36a2de349f59737a670a10db834 281 Pfam PF02311 AraC-like ligand binding domain 18 145 9.1E-23 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG60_12470 a510a36a2de349f59737a670a10db834 281 Gene3D G3DSA:1.10.10.60 169 224 7.8E-14 T 23-10-2018 CDG60_09040 e047024a37ea1c04573506546c3ccec8 253 Pfam PF12697 Alpha/beta hydrolase family 18 246 1.0E-16 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_09040 e047024a37ea1c04573506546c3ccec8 253 Gene3D G3DSA:3.40.50.1820 4 253 3.1E-60 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_09040 e047024a37ea1c04573506546c3ccec8 253 SUPERFAMILY SSF53474 5 252 9.4E-42 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_05935 74e1e6b3b74bf62c297c8a979d33f040 371 Gene3D G3DSA:3.40.190.10 38 186 2.6E-15 T 23-10-2018 CDG60_05935 74e1e6b3b74bf62c297c8a979d33f040 371 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 128 3.3E-6 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG60_05935 74e1e6b3b74bf62c297c8a979d33f040 371 SUPERFAMILY SSF53955 210 363 1.74E-32 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_05935 74e1e6b3b74bf62c297c8a979d33f040 371 SUPERFAMILY SSF53850 26 121 2.07E-6 T 23-10-2018 CDG60_05935 74e1e6b3b74bf62c297c8a979d33f040 371 Gene3D G3DSA:1.10.530.10 206 368 1.0E-34 T 23-10-2018 CDG60_05935 74e1e6b3b74bf62c297c8a979d33f040 371 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 231 259 - T 23-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDG60_05935 74e1e6b3b74bf62c297c8a979d33f040 371 Pfam PF01464 Transglycosylase SLT domain 214 324 2.3E-21 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_15095 6c2efa9529bc0d380b5f20130e00a7bd 281 Gene3D G3DSA:3.30.1300.10 178 281 1.9E-28 T 23-10-2018 CDG60_15095 6c2efa9529bc0d380b5f20130e00a7bd 281 SUPERFAMILY SSF52374 1 278 6.7E-105 T 23-10-2018 CDG60_15095 6c2efa9529bc0d380b5f20130e00a7bd 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 7.4E-96 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDG60_15095 6c2efa9529bc0d380b5f20130e00a7bd 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 71 8.5E-10 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG60_15095 6c2efa9529bc0d380b5f20130e00a7bd 281 Gene3D G3DSA:3.40.50.620 1 177 8.5E-76 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_15095 6c2efa9529bc0d380b5f20130e00a7bd 281 Pfam PF02569 Pantoate-beta-alanine ligase 5 275 5.6E-104 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDG60_15095 6c2efa9529bc0d380b5f20130e00a7bd 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 40.094 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDG60_09200 9f6544b7a1995e1a63320c08a3fcf64c 240 Gene3D G3DSA:2.60.120.10 133 237 2.1E-27 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_09200 9f6544b7a1995e1a63320c08a3fcf64c 240 Gene3D G3DSA:2.60.120.10 12 132 5.7E-56 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_09200 9f6544b7a1995e1a63320c08a3fcf64c 240 SUPERFAMILY SSF51182 1 233 6.2E-73 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_09200 9f6544b7a1995e1a63320c08a3fcf64c 240 Pfam PF02678 Pirin 8 119 3.1E-35 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG60_09200 9f6544b7a1995e1a63320c08a3fcf64c 240 PIRSF PIRSF006232 1 238 4.6E-50 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG60_07815 e20f3f5f37e1622c6ea1d47bdaac217b 464 Gene3D G3DSA:1.25.40.10 244 461 1.1E-12 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_07815 e20f3f5f37e1622c6ea1d47bdaac217b 464 Pfam PF14559 Tetratricopeptide repeat 331 396 4.2E-7 T 23-10-2018 CDG60_07815 e20f3f5f37e1622c6ea1d47bdaac217b 464 Pfam PF01435 Peptidase family M48 56 240 1.6E-33 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG60_07815 e20f3f5f37e1622c6ea1d47bdaac217b 464 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 462 30.627 T 23-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CDG60_07815 e20f3f5f37e1622c6ea1d47bdaac217b 464 Gene3D G3DSA:3.30.2010.10 51 132 3.8E-7 T 23-10-2018 CDG60_07815 e20f3f5f37e1622c6ea1d47bdaac217b 464 SUPERFAMILY SSF48452 281 442 7.27E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 SMART SM00342 169 251 2.5E-27 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 Pfam PF02311 AraC-like ligand binding domain 14 77 2.9E-6 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 2.0E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 2.0E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 SUPERFAMILY SSF51182 14 183 5.34E-12 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 Gene3D G3DSA:2.60.120.10 14 94 7.6E-7 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 Gene3D G3DSA:1.10.10.60 156 254 3.4E-25 T 23-10-2018 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 SUPERFAMILY SSF46689 206 254 2.33E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_15805 b1682961f624c899f52a8c2491ae7686 255 Pfam PF12833 Helix-turn-helix domain 176 252 2.3E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_12825 df469dc8445e58408493bb4b2bd57257 183 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 7 177 3.7E-52 T 23-10-2018 IPR018715 Protein of unknown function DUF2239 CDG60_03620 d842db68bae81402dbe8014ae801c953 375 Gene3D G3DSA:3.40.50.720 3 369 1.6E-131 T 23-10-2018 CDG60_03620 d842db68bae81402dbe8014ae801c953 375 SMART SM01002 145 316 2.4E-71 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDG60_03620 d842db68bae81402dbe8014ae801c953 375 SMART SM01003 4 136 2.8E-55 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDG60_03620 d842db68bae81402dbe8014ae801c953 375 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 23-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CDG60_03620 d842db68bae81402dbe8014ae801c953 375 SUPERFAMILY SSF51735 136 322 4.05E-36 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03620 d842db68bae81402dbe8014ae801c953 375 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 23-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 CDG60_03620 d842db68bae81402dbe8014ae801c953 375 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 371 7.2E-72 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDG60_03620 d842db68bae81402dbe8014ae801c953 375 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.9E-39 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDG60_03620 d842db68bae81402dbe8014ae801c953 375 SUPERFAMILY SSF52283 1 167 3.91E-48 T 23-10-2018 CDG60_03620 d842db68bae81402dbe8014ae801c953 375 Gene3D G3DSA:3.40.50.720 136 323 1.6E-131 T 23-10-2018 CDG60_00020 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.30.200.20 4 92 1.6E-7 T 23-10-2018 CDG60_00020 894e1f0ad6ba9ed50160bb983b4c7ca4 294 SUPERFAMILY SSF56112 31 242 1.11E-22 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_00020 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.90.1200.10 103 292 1.5E-25 T 23-10-2018 CDG60_00020 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Pfam PF01636 Phosphotransferase enzyme family 27 245 2.3E-21 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 Pfam PF03466 LysR substrate binding domain 87 289 7.4E-23 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 SUPERFAMILY SSF53850 93 289 7.6E-23 T 23-10-2018 CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 Gene3D G3DSA:3.40.190.10 163 266 5.6E-30 T 23-10-2018 CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 SUPERFAMILY SSF46785 1 85 3.27E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.4E-24 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 Gene3D G3DSA:1.10.10.10 1 93 1.8E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06755 cae2abb0d641155b2b23f89da41e3855 299 Gene3D G3DSA:3.40.190.10 94 289 5.6E-30 T 23-10-2018 CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.9E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.9E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.9E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.9E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.9E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.9E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 Gene3D G3DSA:3.40.50.720 3 264 3.8E-64 T 23-10-2018 CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 SUPERFAMILY SSF51735 2 257 1.84E-55 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_03005 f79e765489e83f5e744275ddc545c5c0 272 Pfam PF00106 short chain dehydrogenase 8 195 2.6E-44 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04500 7cde6c05224a7b57b8e9e581ad4d8e22 476 Pfam PF00324 Amino acid permease 25 468 2.3E-104 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_04500 7cde6c05224a7b57b8e9e581ad4d8e22 476 Gene3D G3DSA:1.20.1740.10 16 476 7.4E-62 T 23-10-2018 CDG60_04500 7cde6c05224a7b57b8e9e581ad4d8e22 476 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG60_04500 7cde6c05224a7b57b8e9e581ad4d8e22 476 PIRSF PIRSF006060 4 476 4.6E-71 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_15690 1b370f9b0cd2c971d1e79ee0b3e1068f 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 255 9.1E-74 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG60_15690 1b370f9b0cd2c971d1e79ee0b3e1068f 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 260 6.4E-77 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG60_15690 1b370f9b0cd2c971d1e79ee0b3e1068f 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 260 19.33 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG60_15690 1b370f9b0cd2c971d1e79ee0b3e1068f 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 137 149 - T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 398 32.986 T 23-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 Gene3D G3DSA:1.10.3860.10 1 398 1.5E-69 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 SUPERFAMILY SSF118215 10 394 2.48E-88 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 Pfam PF00375 Sodium:dicarboxylate symporter family 10 394 5.0E-64 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 PRINTS PR00173 Glutamate-aspartate symporter signature 283 309 2.4E-13 T 23-10-2018 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 PRINTS PR00173 Glutamate-aspartate symporter signature 216 235 2.4E-13 T 23-10-2018 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 PRINTS PR00173 Glutamate-aspartate symporter signature 3 28 2.4E-13 T 23-10-2018 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 PRINTS PR00173 Glutamate-aspartate symporter signature 181 200 2.4E-13 T 23-10-2018 CDG60_09275 1a822dabf234ae9dab36306267ae9458 398 PRINTS PR00173 Glutamate-aspartate symporter signature 318 337 2.4E-13 T 23-10-2018 CDG60_04950 80a7ed12e9a663b2234adba5d378a206 196 SUPERFAMILY SSF46785 17 92 1.96E-13 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_04950 80a7ed12e9a663b2234adba5d378a206 196 Gene3D G3DSA:1.10.10.10 92 188 1.0E-28 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04950 80a7ed12e9a663b2234adba5d378a206 196 PIRSF PIRSF019345 5 196 1.0E-51 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDG60_04950 80a7ed12e9a663b2234adba5d378a206 196 SUPERFAMILY SSF46785 95 170 2.08E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_04950 80a7ed12e9a663b2234adba5d378a206 196 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 21 184 4.4E-30 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDG60_04950 80a7ed12e9a663b2234adba5d378a206 196 Gene3D G3DSA:1.10.10.10 12 91 3.9E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04950 80a7ed12e9a663b2234adba5d378a206 196 Pfam PF04079 Segregation and condensation complex subunit ScpB 21 179 6.1E-47 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDG60_17995 ccca85e2d91dbb50a4c1f9e233c9fc98 170 Gene3D G3DSA:3.40.50.7700 1 169 8.4E-73 T 23-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CDG60_17995 ccca85e2d91dbb50a4c1f9e233c9fc98 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 12 165 32.259 T 23-10-2018 IPR033747 Class I PurE CDG60_17995 ccca85e2d91dbb50a4c1f9e233c9fc98 170 SUPERFAMILY SSF52255 11 166 6.54E-66 T 23-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CDG60_17995 ccca85e2d91dbb50a4c1f9e233c9fc98 170 Pfam PF00731 AIR carboxylase 12 159 3.6E-63 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDG60_17995 ccca85e2d91dbb50a4c1f9e233c9fc98 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 12 165 1.1E-64 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDG60_17995 ccca85e2d91dbb50a4c1f9e233c9fc98 170 PIRSF PIRSF001338 7 167 3.4E-66 T 23-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CDG60_17995 ccca85e2d91dbb50a4c1f9e233c9fc98 170 SMART SM01001 10 161 5.7E-102 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 Gene3D G3DSA:1.20.140.10 254 407 1.7E-39 T 23-10-2018 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 28 140 7.6E-33 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 398 2.5E-27 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 240 7.8E-21 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 SUPERFAMILY SSF56645 15 251 5.1E-77 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 SUPERFAMILY SSF47203 252 401 1.21E-40 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 358 377 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 Gene3D G3DSA:1.10.540.10 10 142 5.2E-40 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_08060 c5e361cfc21cd8eefad8e8f41c7f00fd 407 Gene3D G3DSA:2.40.110.10 143 252 1.8E-37 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 Gene3D G3DSA:2.70.150.20 99 206 3.8E-24 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 SUPERFAMILY SSF81665 29 655 1.83E-9 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 9 671 38.358 T 23-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 Pfam PF00702 haloacid dehalogenase-like hydrolase 296 521 3.0E-36 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 Gene3D G3DSA:3.40.1110.10 314 437 2.6E-42 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 302 308 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 454 464 1.9E-22 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 542 1.9E-22 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 149 163 1.9E-22 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 526 1.9E-22 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 300 314 1.9E-22 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 365 593 1.7E-46 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 69 333 1.5E-31 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 Pfam PF00122 E1-E2 ATPase 101 279 6.0E-32 T 23-10-2018 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 SUPERFAMILY SSF81653 108 202 8.76E-20 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 15 668 2.6E-287 T 23-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CDG60_07455 aedfc5892c89c2dc92f9ccb524e838d8 673 SUPERFAMILY SSF56784 288 550 1.03E-41 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 1.2E-45 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.3E-61 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 Gene3D G3DSA:3.40.30.80 1 199 1.2E-61 T 23-10-2018 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 Pfam PF13192 Thioredoxin domain 119 194 2.4E-10 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PIRSF PIRSF000238 1 521 9.2E-252 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 SUPERFAMILY SSF52833 1 100 2.91E-26 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 3.9E-230 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 23-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 SUPERFAMILY SSF51905 204 515 2.4E-50 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 Gene3D G3DSA:3.50.50.60 212 509 3.9E-107 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 2.1E-37 T 23-10-2018 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 2.1E-37 T 23-10-2018 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 2.1E-37 T 23-10-2018 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 2.1E-37 T 23-10-2018 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 2.1E-37 T 23-10-2018 CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 Gene3D G3DSA:3.50.50.60 327 450 3.9E-107 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_12080 6c9c927a32455ded68e7f1f6f832ce9e 521 SUPERFAMILY SSF52833 103 196 3.64E-21 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_09180 a5822a842d9220dc439751209633c7ea 385 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 333 6.5E-74 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG60_09180 a5822a842d9220dc439751209633c7ea 385 SUPERFAMILY SSF51395 6 336 3.1E-95 T 23-10-2018 CDG60_09180 a5822a842d9220dc439751209633c7ea 385 Gene3D G3DSA:3.20.20.70 5 367 1.8E-107 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_09030 89b4f5d06f5541d6e8cd92dad0fcf99e 643 Gene3D G3DSA:2.170.130.10 9 135 8.7E-36 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_09030 89b4f5d06f5541d6e8cd92dad0fcf99e 643 SUPERFAMILY SSF56935 12 639 5.83E-120 T 23-10-2018 CDG60_09030 89b4f5d06f5541d6e8cd92dad0fcf99e 643 Pfam PF07715 TonB-dependent Receptor Plug Domain 26 130 7.1E-24 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_09030 89b4f5d06f5541d6e8cd92dad0fcf99e 643 Pfam PF00593 TonB dependent receptor 217 638 4.1E-62 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_09030 89b4f5d06f5541d6e8cd92dad0fcf99e 643 Gene3D G3DSA:2.40.170.20 151 639 4.5E-81 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_08420 055c7734fcd81df2181e67c745a2cc1f 223 SUPERFAMILY SSF75445 131 201 3.79E-23 T 23-10-2018 CDG60_08420 055c7734fcd81df2181e67c745a2cc1f 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 216 2.3E-59 T 23-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDG60_08420 055c7734fcd81df2181e67c745a2cc1f 223 SUPERFAMILY SSF100950 7 149 2.16E-44 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_08420 055c7734fcd81df2181e67c745a2cc1f 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 7 220 33.087 T 23-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDG60_08420 055c7734fcd81df2181e67c745a2cc1f 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 217 1.3E-64 T 23-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDG60_08420 055c7734fcd81df2181e67c745a2cc1f 223 Gene3D G3DSA:3.40.50.1360 11 212 3.7E-73 T 23-10-2018 CDG60_08420 055c7734fcd81df2181e67c745a2cc1f 223 Gene3D G3DSA:3.30.70.260 127 198 3.7E-73 T 23-10-2018 CDG60_08815 fac77d27736efe7e4ed302731fc69f18 212 Gene3D G3DSA:3.90.1680.10 1 203 8.5E-52 T 23-10-2018 IPR036590 SOS response associated peptidase-like CDG60_08815 fac77d27736efe7e4ed302731fc69f18 212 SUPERFAMILY SSF143081 20 198 3.27E-46 T 23-10-2018 IPR036590 SOS response associated peptidase-like CDG60_08815 fac77d27736efe7e4ed302731fc69f18 212 Pfam PF02586 SOS response associated peptidase (SRAP) 28 187 1.6E-24 T 23-10-2018 IPR003738 SOS response associated peptidase (SRAP) CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 Pfam PF03466 LysR substrate binding domain 93 290 7.1E-49 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 SUPERFAMILY SSF53850 93 290 4.67E-44 T 23-10-2018 CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 SUPERFAMILY SSF46785 1 111 1.47E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.9E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.9E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.9E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.7E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 Gene3D G3DSA:1.10.10.10 1 86 3.3E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_13805 5dc8bbc0bfda3f8eb1e4b9e5d4727053 292 Gene3D G3DSA:3.40.190.290 92 292 7.0E-40 T 23-10-2018 CDG60_06695 fb5dc630f2290f394fdc67e41691cfd6 313 Pfam PF07859 alpha/beta hydrolase fold 83 286 1.3E-64 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG60_06695 fb5dc630f2290f394fdc67e41691cfd6 313 SUPERFAMILY SSF53474 22 311 1.34E-63 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_06695 fb5dc630f2290f394fdc67e41691cfd6 313 Gene3D G3DSA:3.40.50.1820 10 312 3.2E-80 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_00320 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 2.0E-40 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_00320 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_03200 a22c9aae3cef176283404f565855a44c 372 SUPERFAMILY SSF55347 134 354 1.4E-75 T 23-10-2018 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 32.861 T 23-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 23-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 353 1.2E-54 T 23-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 PIRSF PIRSF000148 1 371 4.3E-65 T 23-10-2018 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 SUPERFAMILY SSF51735 1 147 1.1E-52 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03200 a22c9aae3cef176283404f565855a44c 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 367 1.5E-190 T 23-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 Gene3D G3DSA:3.40.50.720 3 356 6.0E-139 T 23-10-2018 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 Gene3D G3DSA:3.30.360.10 135 350 6.0E-139 T 23-10-2018 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 SMART SM00859 2 122 5.7E-26 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG60_03200 a22c9aae3cef176283404f565855a44c 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 1.5E-22 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG60_12360 acffdc95fac9717a7e2ad608bb6311c8 224 Pfam PF00717 Peptidase S24-like 136 200 1.5E-6 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_12360 acffdc95fac9717a7e2ad608bb6311c8 224 SUPERFAMILY SSF47413 13 80 4.83E-15 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_12360 acffdc95fac9717a7e2ad608bb6311c8 224 Gene3D G3DSA:1.10.260.40 11 77 1.5E-18 T 23-10-2018 CDG60_12360 acffdc95fac9717a7e2ad608bb6311c8 224 SMART SM00530 18 73 1.9E-9 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_12360 acffdc95fac9717a7e2ad608bb6311c8 224 Pfam PF01381 Helix-turn-helix 19 66 3.0E-10 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_12360 acffdc95fac9717a7e2ad608bb6311c8 224 SUPERFAMILY SSF51306 93 207 7.32E-16 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_12360 acffdc95fac9717a7e2ad608bb6311c8 224 Gene3D G3DSA:2.10.109.10 91 224 2.0E-27 T 23-10-2018 CDG60_09835 4bb24b2f7ca65ace9248101ace3a334a 375 Pfam PF13479 AAA domain 19 202 2.1E-29 T 23-10-2018 CDG60_17085 a2a937df7cee125baef16a8fd0635baf 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 56 9.8E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_17085 a2a937df7cee125baef16a8fd0635baf 206 Gene3D G3DSA:1.10.357.10 1 200 8.9E-27 T 23-10-2018 CDG60_17085 a2a937df7cee125baef16a8fd0635baf 206 SUPERFAMILY SSF46689 3 76 1.69E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_11365 e85127640c1fb3ae4b2bd0baaad7b5d5 221 Gene3D G3DSA:3.40.50.150 1 221 4.4E-62 T 23-10-2018 CDG60_11365 e85127640c1fb3ae4b2bd0baaad7b5d5 221 Pfam PF01596 O-methyltransferase 18 190 5.2E-39 T 23-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CDG60_11365 e85127640c1fb3ae4b2bd0baaad7b5d5 221 SUPERFAMILY SSF53335 4 220 2.65E-36 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_08085 86093ba633855814952b6e1638e05434 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 620 636 3.4E-19 T 23-10-2018 CDG60_08085 86093ba633855814952b6e1638e05434 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.4E-19 T 23-10-2018 CDG60_08085 86093ba633855814952b6e1638e05434 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 3.4E-19 T 23-10-2018 CDG60_08085 86093ba633855814952b6e1638e05434 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 3.4E-19 T 23-10-2018 CDG60_08085 86093ba633855814952b6e1638e05434 674 Gene3D G3DSA:3.20.20.70 3 369 2.4E-121 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_08085 86093ba633855814952b6e1638e05434 674 SUPERFAMILY SSF51905 464 652 1.23E-21 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08085 86093ba633855814952b6e1638e05434 674 Gene3D G3DSA:3.40.50.720 376 667 4.2E-115 T 23-10-2018 CDG60_08085 86093ba633855814952b6e1638e05434 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 638 6.9E-25 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_08085 86093ba633855814952b6e1638e05434 674 SUPERFAMILY SSF51971 334 522 5.89E-40 T 23-10-2018 CDG60_08085 86093ba633855814952b6e1638e05434 674 Gene3D G3DSA:3.50.50.60 473 627 4.2E-115 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08085 86093ba633855814952b6e1638e05434 674 SUPERFAMILY SSF51395 3 363 2.51E-107 T 23-10-2018 CDG60_08085 86093ba633855814952b6e1638e05434 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 3.3E-7 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_08085 86093ba633855814952b6e1638e05434 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 3.3E-7 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_08085 86093ba633855814952b6e1638e05434 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 3.8E-86 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG60_14785 84508769084237413e265462bfedd445 455 PRINTS PR00095 Anthranilate synthase component I signature 374 388 8.1E-8 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_14785 84508769084237413e265462bfedd445 455 PRINTS PR00095 Anthranilate synthase component I signature 294 307 8.1E-8 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_14785 84508769084237413e265462bfedd445 455 PRINTS PR00095 Anthranilate synthase component I signature 280 293 8.1E-8 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_14785 84508769084237413e265462bfedd445 455 Pfam PF00425 chorismate binding enzyme 178 432 2.4E-92 T 23-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDG60_14785 84508769084237413e265462bfedd445 455 SUPERFAMILY SSF56322 51 441 2.49E-109 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG60_14785 84508769084237413e265462bfedd445 455 Gene3D G3DSA:3.60.120.10 40 442 1.4E-121 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 Gene3D G3DSA:4.10.640.10 1 75 2.3E-27 T 23-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.2E-35 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 SUPERFAMILY SSF46911 3 74 3.01E-29 T 23-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 20 71 7.0E-23 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 Pfam PF01084 Ribosomal protein S18 18 68 7.1E-25 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.1E-17 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.1E-17 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.1E-17 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.1E-17 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.175 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11100 7a022e7149d1d7c2a0eed95dd46627a0 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 23-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_10155 b0cf669f1e7d59c3a5fbcf216b410128 283 Gene3D G3DSA:3.30.540.10 9 153 8.5E-29 T 23-10-2018 CDG60_10155 b0cf669f1e7d59c3a5fbcf216b410128 283 Gene3D G3DSA:3.40.190.80 157 267 2.9E-25 T 23-10-2018 CDG60_10155 b0cf669f1e7d59c3a5fbcf216b410128 283 Pfam PF00459 Inositol monophosphatase family 17 263 8.2E-35 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_10155 b0cf669f1e7d59c3a5fbcf216b410128 283 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 265 32.67 T 23-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CDG60_10155 b0cf669f1e7d59c3a5fbcf216b410128 283 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 91 104 - T 23-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CDG60_10155 b0cf669f1e7d59c3a5fbcf216b410128 283 SUPERFAMILY SSF56655 11 277 1.19E-52 T 23-10-2018 CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 SUPERFAMILY SSF46785 7 66 7.52E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 SMART SM00344 8 117 1.9E-44 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 2.1E-18 T 23-10-2018 CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 SUPERFAMILY SSF54909 70 155 1.09E-19 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 Gene3D G3DSA:1.10.10.10 1 61 1.9E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 5.1E-19 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.9E-14 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.9E-14 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.9E-14 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_08030 6f72720cfba7ad2349a5acd27b46f977 164 Gene3D G3DSA:3.30.70.920 62 145 2.4E-20 T 23-10-2018 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 101 3.4E-45 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 8 267 5.3E-115 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 Gene3D G3DSA:3.90.226.10 1 268 2.4E-94 T 23-10-2018 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 SUPERFAMILY SSF52096 7 266 3.54E-84 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 41 52 1.4E-40 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 119 1.4E-40 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 122 135 1.4E-40 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 66 84 1.4E-40 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 103 1.4E-40 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 150 159 1.4E-40 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14945 4b25dbe40e3ecd263c8b8d1fa9544f7f 274 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 268 38.722 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_11815 62ad7ac6050371118e4ff270512b771d 567 Pfam PF05299 M61 glycyl aminopeptidase 268 384 1.2E-46 T 23-10-2018 IPR007963 Peptidase M61, catalytic domain CDG60_11815 62ad7ac6050371118e4ff270512b771d 567 Gene3D G3DSA:1.10.390.60 175 445 1.4E-99 T 23-10-2018 CDG60_11815 62ad7ac6050371118e4ff270512b771d 567 SUPERFAMILY SSF50156 459 541 7.89E-9 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_11815 62ad7ac6050371118e4ff270512b771d 567 PIRSF PIRSF016493 1 567 8.2E-195 T 23-10-2018 IPR024191 Peptidase M61 CDG60_11815 62ad7ac6050371118e4ff270512b771d 567 Gene3D G3DSA:2.30.42.10 468 567 4.2E-15 T 23-10-2018 CDG60_11815 62ad7ac6050371118e4ff270512b771d 567 SUPERFAMILY SSF55486 180 393 2.49E-14 T 23-10-2018 CDG60_11815 62ad7ac6050371118e4ff270512b771d 567 Gene3D G3DSA:2.60.40.3650 1 172 8.6E-53 T 23-10-2018 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 PIRSF PIRSF000089 1 310 4.3E-100 T 23-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 3.7E-34 T 23-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 SMART SM00893 3 182 2.4E-50 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 SUPERFAMILY SSF52467 189 309 2.25E-44 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 23-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 Gene3D G3DSA:3.40.50.1220 184 310 3.8E-54 T 23-10-2018 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 Pfam PF01012 Electron transfer flavoprotein domain 4 167 2.3E-37 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 SUPERFAMILY SSF52402 2 186 1.17E-55 T 23-10-2018 CDG60_06490 542b5c39520ef72594ef1f792df7204d 310 Gene3D G3DSA:3.40.50.620 2 183 2.1E-53 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_15505 99e1f1da3ef303b4494a03f61e580835 161 SUPERFAMILY SSF55486 17 156 6.84E-44 T 23-10-2018 CDG60_15505 99e1f1da3ef303b4494a03f61e580835 161 Gene3D G3DSA:3.40.390.30 2 161 5.4E-48 T 23-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 CDG60_15505 99e1f1da3ef303b4494a03f61e580835 161 Pfam PF02130 Uncharacterized protein family UPF0054 21 150 8.6E-37 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDG60_15505 99e1f1da3ef303b4494a03f61e580835 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 151 8.8E-36 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDG60_15505 99e1f1da3ef303b4494a03f61e580835 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 23-10-2018 IPR020549 Endoribonuclease YbeY, conserved site CDG60_15505 99e1f1da3ef303b4494a03f61e580835 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 154 22.856 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDG60_10510 7e42e19863faf685562a5315393a283f 571 Gene3D G3DSA:3.40.50.300 187 399 1.7E-5 T 23-10-2018 CDG60_10510 7e42e19863faf685562a5315393a283f 571 SMART SM00382 12 168 5.3E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_10510 7e42e19863faf685562a5315393a283f 571 Pfam PF05970 PIF1-like helicase 196 297 1.0E-6 T 23-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 CDG60_10510 7e42e19863faf685562a5315393a283f 571 Pfam PF05970 PIF1-like helicase 11 182 2.8E-37 T 23-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 CDG60_10510 7e42e19863faf685562a5315393a283f 571 SUPERFAMILY SSF52540 125 399 9.03E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10510 7e42e19863faf685562a5315393a283f 571 Gene3D G3DSA:3.40.50.300 1 172 3.8E-32 T 23-10-2018 CDG60_10510 7e42e19863faf685562a5315393a283f 571 SUPERFAMILY SSF52540 3 178 1.89E-26 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10510 7e42e19863faf685562a5315393a283f 571 Pfam PF14493 Helix-turn-helix domain 467 567 2.8E-16 T 23-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CDG60_05920 0ad8b0ce30e08fb5204ef4cf3837119c 284 Pfam PF01464 Transglycosylase SLT domain 92 198 1.2E-30 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_05920 0ad8b0ce30e08fb5204ef4cf3837119c 284 SUPERFAMILY SSF53955 86 208 1.72E-47 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_05920 0ad8b0ce30e08fb5204ef4cf3837119c 284 Gene3D G3DSA:1.10.530.10 49 215 7.8E-50 T 23-10-2018 CDG60_16595 cf9a07004feac97c6bd81944ac63dc5f 157 Gene3D G3DSA:3.30.700.10 1 157 1.8E-28 T 23-10-2018 CDG60_16595 cf9a07004feac97c6bd81944ac63dc5f 157 SUPERFAMILY SSF54523 16 157 1.31E-16 T 23-10-2018 CDG60_16595 cf9a07004feac97c6bd81944ac63dc5f 157 Pfam PF00114 Pilin (bacterial filament) 23 157 1.1E-9 T 23-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 Gene3D G3DSA:3.40.190.290 91 285 1.8E-40 T 23-10-2018 CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 Pfam PF03466 LysR substrate binding domain 87 284 2.3E-41 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 SUPERFAMILY SSF46785 1 111 3.97E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 SUPERFAMILY SSF53850 88 284 7.24E-41 T 23-10-2018 CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 6.8E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_03125 73a732f78e4ffeab41231a16b3552d30 285 Gene3D G3DSA:1.10.10.10 1 90 7.2E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_05580 03f520f2682cc05c7129b0760e078175 132 Gene3D G3DSA:1.20.1300.10 2 131 1.5E-32 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05580 03f520f2682cc05c7129b0760e078175 132 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 125 2.0E-24 T 23-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05580 03f520f2682cc05c7129b0760e078175 132 PIRSF PIRSF000178 2 132 2.0E-19 T 23-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05580 03f520f2682cc05c7129b0760e078175 132 SUPERFAMILY SSF81343 6 130 3.43E-25 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05580 03f520f2682cc05c7129b0760e078175 132 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 23 129 3.4E-30 T 23-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_14305 63c719b836d36628711f0d829238bdb4 89 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 9 88 2.0E-37 T 23-10-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDG60_14305 63c719b836d36628711f0d829238bdb4 89 Gene3D G3DSA:3.90.56.10 1 89 6.8E-37 T 23-10-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDG60_14305 63c719b836d36628711f0d829238bdb4 89 SUPERFAMILY SSF56029 3 89 9.29E-31 T 23-10-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 CDG60_14305 63c719b836d36628711f0d829238bdb4 89 Pfam PF02406 MmoB/DmpM family 4 86 3.4E-30 T 23-10-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 Gene3D G3DSA:3.40.50.720 1 252 4.5E-63 T 23-10-2018 CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 SUPERFAMILY SSF51735 4 250 3.26E-64 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.0E-49 T 23-10-2018 CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.4E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.4E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.4E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.2E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.2E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.2E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.2E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.2E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_12765 7ac610eab1f9e19d2ce774847808444b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.2E-28 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 Pfam PF01327 Polypeptide deformylase 5 153 8.0E-53 T 23-10-2018 IPR023635 Peptide deformylase CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 1.8E-57 T 23-10-2018 IPR023635 Peptide deformylase CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 PIRSF PIRSF004749 1 175 8.2E-58 T 23-10-2018 IPR023635 Peptide deformylase CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.528 T 23-10-2018 IPR023635 Peptide deformylase CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 Gene3D G3DSA:3.90.45.10 1 168 3.5E-66 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 SUPERFAMILY SSF56420 2 165 1.57E-62 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 PRINTS PR01576 Peptide deformylase signature 33 62 2.0E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 PRINTS PR01576 Peptide deformylase signature 121 150 2.0E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 PRINTS PR01576 Peptide deformylase signature 90 101 2.0E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG60_01680 bf43b6b2b3460d7e2eaa42114a3ab71a 176 PRINTS PR01576 Peptide deformylase signature 102 120 2.0E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG60_11495 b354240d685ee1351ec33db1aecdb4fc 499 Gene3D G3DSA:3.40.1080.10 15 186 5.6E-17 T 23-10-2018 CDG60_11495 b354240d685ee1351ec33db1aecdb4fc 499 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 496 3.2E-220 T 23-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 CDG60_11495 b354240d685ee1351ec33db1aecdb4fc 499 SUPERFAMILY SSF100950 6 224 9.14E-68 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_11495 b354240d685ee1351ec33db1aecdb4fc 499 SUPERFAMILY SSF100950 230 497 1.62E-78 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_11495 b354240d685ee1351ec33db1aecdb4fc 499 Gene3D G3DSA:3.40.1080.20 338 478 1.5E-37 T 23-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDG60_11495 b354240d685ee1351ec33db1aecdb4fc 499 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 217 2.5E-27 T 23-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CDG60_11495 b354240d685ee1351ec33db1aecdb4fc 499 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 465 1.7E-41 T 23-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDG60_10815 42bad713e21f68047cde34c5d37aa877 167 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 159 5.8E-35 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG60_10815 42bad713e21f68047cde34c5d37aa877 167 Gene3D G3DSA:3.40.50.2300 7 166 9.0E-50 T 23-10-2018 CDG60_10815 42bad713e21f68047cde34c5d37aa877 167 SUPERFAMILY SSF52788 6 160 5.23E-45 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG60_10815 42bad713e21f68047cde34c5d37aa877 167 SMART SM00226 7 161 8.0E-38 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG60_10815 42bad713e21f68047cde34c5d37aa877 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 133 148 7.3E-14 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_10815 42bad713e21f68047cde34c5d37aa877 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 9 26 7.3E-14 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_10815 42bad713e21f68047cde34c5d37aa877 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 50 66 7.3E-14 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_11830 5afd9d4e09b7b1e9b1f07e0b551d1a59 160 Gene3D G3DSA:3.10.50.40 4 154 5.1E-58 T 23-10-2018 CDG60_11830 5afd9d4e09b7b1e9b1f07e0b551d1a59 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 3.4E-15 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG60_11830 5afd9d4e09b7b1e9b1f07e0b551d1a59 160 SUPERFAMILY SSF54534 4 140 3.14E-38 T 23-10-2018 CDG60_11830 5afd9d4e09b7b1e9b1f07e0b551d1a59 160 Gene3D G3DSA:2.40.10.330 71 121 5.1E-58 T 23-10-2018 CDG60_16975 c0987ab056bc6b2068b83549d60b113a 205 Pfam PF00117 Glutamine amidotransferase class-I 6 200 3.3E-23 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG60_16975 c0987ab056bc6b2068b83549d60b113a 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 35.887 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDG60_16975 c0987ab056bc6b2068b83549d60b113a 205 SUPERFAMILY SSF52317 2 203 1.32E-59 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_16975 c0987ab056bc6b2068b83549d60b113a 205 Gene3D G3DSA:3.40.50.880 1 204 5.3E-79 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_16975 c0987ab056bc6b2068b83549d60b113a 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 8.0E-71 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDG60_16975 c0987ab056bc6b2068b83549d60b113a 205 PIRSF PIRSF000495 2 205 2.5E-73 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDG60_04960 212c18dd3520e013a778a798f193f748 245 Gene3D G3DSA:3.40.630.30 21 240 5.1E-52 T 23-10-2018 CDG60_04960 212c18dd3520e013a778a798f193f748 245 SUPERFAMILY SSF55729 31 204 1.27E-30 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_04960 212c18dd3520e013a778a798f193f748 245 Pfam PF13302 Acetyltransferase (GNAT) domain 64 180 1.6E-7 T 23-10-2018 IPR000182 GNAT domain CDG60_04640 c1cf967947fc2c176a68d821648db42e 299 Pfam PF00696 Amino acid kinase family 27 272 2.6E-45 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG60_04640 c1cf967947fc2c176a68d821648db42e 299 Gene3D G3DSA:3.40.1160.10 4 299 1.3E-98 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_04640 c1cf967947fc2c176a68d821648db42e 299 PIRSF PIRSF000728 12 295 1.6E-108 T 23-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_04640 c1cf967947fc2c176a68d821648db42e 299 SUPERFAMILY SSF53633 6 295 3.53E-93 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_04640 c1cf967947fc2c176a68d821648db42e 299 Hamap MF_00082 Acetylglutamate kinase [argB]. 26 288 49.867 T 23-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_04640 c1cf967947fc2c176a68d821648db42e 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 28 270 2.9E-79 T 23-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 5.9E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 5.9E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 5.9E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 5.9E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 Gene3D G3DSA:1.20.81.30 261 371 8.3E-27 T 23-10-2018 CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 23-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 Pfam PF00482 Type II secretion system (T2SS), protein F 279 400 3.1E-29 T 23-10-2018 IPR018076 Type II secretion system F domain CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 197 2.5E-31 T 23-10-2018 IPR018076 Type II secretion system F domain CDG60_02495 ae4e286b9eacd48e2a2bb7a9ce662430 408 Gene3D G3DSA:1.20.81.30 61 176 2.0E-31 T 23-10-2018 CDG60_06875 88617671bcbae880dfcf4ab8fdfe948c 202 SUPERFAMILY SSF52540 1 200 2.62E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06875 88617671bcbae880dfcf4ab8fdfe948c 202 Pfam PF02223 Thymidylate kinase 5 192 4.0E-54 T 23-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CDG60_06875 88617671bcbae880dfcf4ab8fdfe948c 202 Gene3D G3DSA:3.40.50.300 1 202 6.6E-68 T 23-10-2018 CDG60_06875 88617671bcbae880dfcf4ab8fdfe948c 202 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 191 8.0E-56 T 23-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDG60_06875 88617671bcbae880dfcf4ab8fdfe948c 202 Hamap MF_00165 Thymidylate kinase [tmk]. 1 202 30.581 T 23-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDG60_06875 88617671bcbae880dfcf4ab8fdfe948c 202 ProSitePatterns PS01331 Thymidylate kinase signature. 91 103 - T 23-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDG60_17820 616911889ecf05838df3b2d957953e3d 95 SUPERFAMILY SSF48600 3 91 4.27E-23 T 23-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_17820 616911889ecf05838df3b2d957953e3d 95 Gene3D G3DSA:1.20.59.10 1 95 2.4E-33 T 23-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_17820 616911889ecf05838df3b2d957953e3d 95 Pfam PF01817 Chorismate mutase type II 13 89 2.8E-17 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_17820 616911889ecf05838df3b2d957953e3d 95 SMART SM00830 13 92 9.7E-21 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 PRINTS PR00067 Catalase signature 139 157 1.5E-65 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 PRINTS PR00067 Catalase signature 99 117 1.5E-65 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 PRINTS PR00067 Catalase signature 120 137 1.5E-65 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 PRINTS PR00067 Catalase signature 37 60 1.5E-65 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 PRINTS PR00067 Catalase signature 304 331 1.5E-65 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 PRINTS PR00067 Catalase signature 336 362 1.5E-65 T 23-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 SUPERFAMILY SSF56634 16 498 1.26E-191 T 23-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 SMART SM01060 24 406 6.4E-240 T 23-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 Gene3D G3DSA:2.40.180.10 21 505 7.0E-208 T 23-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 ProSitePatterns PS00438 Catalase proximal active site signature. 60 76 - T 23-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 23-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 Pfam PF00199 Catalase 24 403 3.3E-169 T 23-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 Pfam PF06628 Catalase-related immune-responsive 428 489 1.8E-18 T 23-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_17615 8c1e0bdbe2a9d3fcfff0d35cf3f2c13d 505 PIRSF PIRSF038928 13 495 6.5E-188 T 23-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG60_13310 76a150295e815c63f301203513c9fbc5 310 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 143 267 2.8E-37 T 23-10-2018 IPR012654 Conserved hypothetical protein CHP02391 CDG60_13310 76a150295e815c63f301203513c9fbc5 310 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 141 263 5.2E-38 T 23-10-2018 IPR012654 Conserved hypothetical protein CHP02391 CDG60_05175 62022f2d458fdfec59745344e6241c58 313 Gene3D G3DSA:3.40.190.10 43 288 9.2E-96 T 23-10-2018 CDG60_05175 62022f2d458fdfec59745344e6241c58 313 Gene3D G3DSA:3.40.190.10 148 242 9.2E-96 T 23-10-2018 CDG60_05175 62022f2d458fdfec59745344e6241c58 313 SUPERFAMILY SSF53850 7 286 3.1E-60 T 23-10-2018 CDG60_05175 62022f2d458fdfec59745344e6241c58 313 SMART SM00062 53 285 6.2E-50 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG60_05175 62022f2d458fdfec59745344e6241c58 313 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 283 4.3E-48 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.761 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Pfam PF03725 3' exoribonuclease family, domain 2 461 530 9.1E-7 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 2.2E-14 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Gene3D G3DSA:3.30.1370.10 552 622 5.1E-19 T 23-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Pfam PF00013 KH domain 559 615 1.6E-11 T 23-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 694 0.0 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Pfam PF00575 S1 RNA binding domain 621 692 6.4E-17 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SMART SM00316 622 692 2.9E-23 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Gene3D G3DSA:2.40.50.140 623 696 5.6E-27 T 23-10-2018 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Pfam PF01138 3' exoribonuclease family, domain 1 18 145 8.9E-19 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 1.5E-19 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SUPERFAMILY SSF55666 146 236 9.12E-29 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 322 1.8E-21 T 23-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SUPERFAMILY SSF54791 558 642 1.18E-21 T 23-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SUPERFAMILY SSF54211 3 145 1.82E-45 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SMART SM00322 554 619 6.8E-13 T 23-10-2018 IPR004087 K Homology domain GO:0003676 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SUPERFAMILY SSF50249 622 696 6.94E-19 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SUPERFAMILY SSF55666 452 550 8.84E-29 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Gene3D G3DSA:3.30.230.70 234 551 9.1E-112 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 PIRSF PIRSF005499 3 697 9.9E-284 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 Gene3D G3DSA:3.30.230.70 1 229 1.5E-75 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SUPERFAMILY SSF46915 240 323 1.1E-17 T 23-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG60_02675 49f4682d4fded8dde662bf7de907bc5f 697 SUPERFAMILY SSF54211 297 490 1.11E-45 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SUPERFAMILY SSF50249 429 533 1.64E-21 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.3E-210 T 23-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.6E-86 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Pfam PF00575 S1 RNA binding domain 189 260 2.4E-22 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Pfam PF00575 S1 RNA binding domain 102 171 4.6E-14 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Pfam PF00575 S1 RNA binding domain 361 434 3.4E-20 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Pfam PF00575 S1 RNA binding domain 18 86 3.6E-8 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Pfam PF00575 S1 RNA binding domain 450 520 1.2E-14 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SUPERFAMILY SSF50249 189 277 2.24E-28 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Gene3D G3DSA:2.40.50.140 445 528 3.6E-20 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SUPERFAMILY SSF50249 255 369 1.19E-28 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SUPERFAMILY SSF50249 2 112 4.85E-21 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Gene3D G3DSA:2.40.50.140 187 268 2.0E-29 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SUPERFAMILY SSF50249 342 440 2.24E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SUPERFAMILY SSF50249 103 184 8.58E-16 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SMART SM00316 449 520 6.7E-20 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SMART SM00316 190 260 5.8E-30 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SMART SM00316 19 87 3.8E-8 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SMART SM00316 275 347 1.9E-25 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SMART SM00316 103 171 3.8E-11 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 SMART SM00316 362 434 3.8E-21 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Gene3D G3DSA:2.40.50.140 100 182 6.4E-9 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Gene3D G3DSA:2.40.50.140 5 99 3.6E-17 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Gene3D G3DSA:2.40.50.140 358 444 1.5E-25 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 Gene3D G3DSA:2.40.50.140 269 357 1.7E-28 T 23-10-2018 CDG60_10290 c4c3d07f8d822cd56d5d7c0b237203fc 558 PIRSF PIRSF002111 1 534 2.3E-212 T 23-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 Pfam PF08281 Sigma-70, region 4 116 164 2.0E-9 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 33 64 - T 23-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 SUPERFAMILY SSF88946 12 91 1.02E-11 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 Pfam PF04542 Sigma-70 region 2 14 77 4.8E-6 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 164 4.6E-19 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 SUPERFAMILY SSF88659 107 165 3.92E-10 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 Gene3D G3DSA:1.10.1740.10 2 79 9.3E-9 T 23-10-2018 CDG60_06325 fa7a67b51ead719f1e4b192b40a4c0c7 173 Gene3D G3DSA:1.10.10.10 87 171 7.6E-10 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10375 04c6800ac519240b73782d390fb4758f 575 SMART SM00382 360 553 1.9E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_10375 04c6800ac519240b73782d390fb4758f 575 Gene3D G3DSA:1.20.1560.10 1 324 2.0E-68 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_10375 04c6800ac519240b73782d390fb4758f 575 Gene3D G3DSA:3.40.50.300 327 575 1.5E-90 T 23-10-2018 CDG60_10375 04c6800ac519240b73782d390fb4758f 575 Pfam PF00005 ABC transporter 352 501 1.9E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_10375 04c6800ac519240b73782d390fb4758f 575 SUPERFAMILY SSF90123 10 320 8.11E-65 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_10375 04c6800ac519240b73782d390fb4758f 575 SUPERFAMILY SSF52540 326 570 3.82E-93 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10375 04c6800ac519240b73782d390fb4758f 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 574 2.8E-202 T 23-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CDG60_10375 04c6800ac519240b73782d390fb4758f 575 Pfam PF00664 ABC transporter transmembrane region 22 291 1.4E-43 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG60_10375 04c6800ac519240b73782d390fb4758f 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_02465 aa1a13d5ec37105807b6da1f0617333f 432 Gene3D G3DSA:1.25.40.10 14 139 2.1E-11 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_02465 aa1a13d5ec37105807b6da1f0617333f 432 SUPERFAMILY SSF48452 39 119 4.75E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 Pfam PF11890 Domain of unknown function (DUF3410) 300 349 2.0E-12 T 23-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 Gene3D G3DSA:3.40.50.720 92 254 7.9E-108 T 23-10-2018 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 Gene3D G3DSA:3.30.1370.170 290 350 4.1E-11 T 23-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 355 40.4 T 23-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 116 253 2.0E-36 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 SUPERFAMILY SSF51735 95 254 6.32E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 SUPERFAMILY SSF52283 16 106 2.04E-16 T 23-10-2018 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 276 4.9E-19 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG60_12565 da590108e1213fa3f8a7463f41b43c41 355 Gene3D G3DSA:3.40.50.720 2 272 7.9E-108 T 23-10-2018 CDG60_10390 175bb88784a005ac40a34e3d5f445c88 296 SUPERFAMILY SSF110849 39 134 1.7E-28 T 23-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CDG60_10390 175bb88784a005ac40a34e3d5f445c88 296 Gene3D G3DSA:3.90.1530.30 52 118 7.9E-28 T 23-10-2018 CDG60_10390 175bb88784a005ac40a34e3d5f445c88 296 SUPERFAMILY SSF109709 125 233 2.09E-35 T 23-10-2018 CDG60_10390 175bb88784a005ac40a34e3d5f445c88 296 SMART SM00470 39 132 2.3E-33 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG60_10390 175bb88784a005ac40a34e3d5f445c88 296 Pfam PF02195 ParB-like nuclease domain 40 132 2.7E-27 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG60_10390 175bb88784a005ac40a34e3d5f445c88 296 Gene3D G3DSA:1.10.10.2830 119 232 3.0E-36 T 23-10-2018 CDG60_10390 175bb88784a005ac40a34e3d5f445c88 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 215 2.8E-57 T 23-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Gene3D G3DSA:1.10.1240.10 650 738 7.1E-40 T 23-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 SUPERFAMILY SSF82282 6 396 9.68E-117 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 SUPERFAMILY SSF52242 743 895 4.06E-45 T 23-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Gene3D G3DSA:1.10.288.10 939 1094 6.6E-126 T 23-10-2018 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 TIGRFAM TIGR02082 metH: methionine synthase 12 1194 0.0 T 23-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Pfam PF02574 Homocysteine S-methyltransferase 16 322 1.1E-77 T 23-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 SMART SM01018 658 741 8.5E-44 T 23-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Gene3D G3DSA:3.10.196.10 913 1224 6.6E-126 T 23-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Gene3D G3DSA:3.40.50.280 745 897 1.7E-55 T 23-10-2018 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 941 1210 1.4E-110 T 23-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Pfam PF00809 Pterin binding enzyme 357 595 1.4E-53 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Gene3D G3DSA:3.20.20.330 2 337 1.4E-126 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Gene3D G3DSA:3.20.20.20 338 645 1.9E-130 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Pfam PF02310 B12 binding domain 749 842 1.0E-18 T 23-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 SUPERFAMILY SSF51717 353 621 3.53E-87 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 SUPERFAMILY SSF56507 907 1225 2.09E-111 T 23-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 PIRSF PIRSF000381 1 1197 0.0 T 23-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 Pfam PF02607 B12 binding domain 660 733 5.9E-24 T 23-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_13305 61bf948f5fa5b61c6575f5e2f1eb0fcc 1229 SUPERFAMILY SSF47644 653 740 2.09E-28 T 23-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_00710 107713679046a83fbda41bc32df0fa39 378 Pfam PF13020 Domain of unknown function (DUF3883) 256 352 7.4E-21 T 23-10-2018 IPR024975 Domain of unknown function DUF3883 CDG60_06950 f8f55c28dd33dcd8d1cb8b8ccc12f091 234 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 227 6.8E-15 T 23-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CDG60_06950 f8f55c28dd33dcd8d1cb8b8ccc12f091 234 Gene3D G3DSA:2.40.50.140 3 68 4.9E-10 T 23-10-2018 CDG60_06950 f8f55c28dd33dcd8d1cb8b8ccc12f091 234 SUPERFAMILY SSF50249 3 68 5.14E-6 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_06950 f8f55c28dd33dcd8d1cb8b8ccc12f091 234 Pfam PF11967 Recombination protein O N terminal 5 68 7.3E-9 T 23-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CDG60_06950 f8f55c28dd33dcd8d1cb8b8ccc12f091 234 Gene3D G3DSA:1.20.1440.120 73 234 3.0E-42 T 23-10-2018 CDG60_06950 f8f55c28dd33dcd8d1cb8b8ccc12f091 234 Pfam PF02565 Recombination protein O C terminal 76 226 1.2E-18 T 23-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CDG60_01210 fede130996edb5730baf91dd780677a9 451 SUPERFAMILY SSF51556 60 378 5.19E-82 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_01210 fede130996edb5730baf91dd780677a9 451 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 23-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_01210 fede130996edb5730baf91dd780677a9 451 SUPERFAMILY SSF51338 8 439 4.17E-23 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_01210 fede130996edb5730baf91dd780677a9 451 Gene3D G3DSA:3.20.20.140 61 418 3.7E-127 T 23-10-2018 CDG60_01210 fede130996edb5730baf91dd780677a9 451 Gene3D G3DSA:2.30.40.10 11 433 3.7E-127 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_01210 fede130996edb5730baf91dd780677a9 451 Pfam PF01979 Amidohydrolase family 57 431 2.3E-12 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 SUPERFAMILY SSF52540 274 520 1.08E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 Pfam PF00005 ABC transporter 302 450 5.6E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 Gene3D G3DSA:3.40.50.300 272 528 8.0E-76 T 23-10-2018 CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 Gene3D G3DSA:3.40.50.300 10 271 3.0E-77 T 23-10-2018 CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 SUPERFAMILY SSF52540 13 256 1.55E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 Pfam PF00005 ABC transporter 29 184 1.8E-27 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 SMART SM00382 309 507 5.7E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 SMART SM00382 37 234 2.4E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_06070 99d80e23245afb8821b6449e5a6e4858 528 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 Gene3D G3DSA:3.40.47.10 126 388 4.0E-143 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 SUPERFAMILY SSF53901 269 390 2.11E-39 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 Gene3D G3DSA:3.40.47.10 5 274 4.0E-143 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.4E-131 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 SUPERFAMILY SSF53901 3 268 2.51E-81 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.1E-88 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 PIRSF PIRSF000429 1 391 2.6E-115 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_04355 021c4374db212642aedc6245d53f38e1 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 1.4E-44 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_14110 34436217bfffd7608a343ade82a60924 154 PIRSF PIRSF018267 10 150 8.2E-48 T 23-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CDG60_14110 34436217bfffd7608a343ade82a60924 154 SUPERFAMILY SSF52980 16 147 3.49E-44 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_14110 34436217bfffd7608a343ade82a60924 154 Pfam PF03852 DNA mismatch endonuclease Vsr 16 82 3.7E-30 T 23-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CDG60_14110 34436217bfffd7608a343ade82a60924 154 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 15 125 1.6E-40 T 23-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CDG60_14110 34436217bfffd7608a343ade82a60924 154 Gene3D G3DSA:3.40.960.10 29 152 2.6E-43 T 23-10-2018 CDG60_04940 ba3b8c11da1e4246eecf2fe882f5d4aa 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CDG60_04940 ba3b8c11da1e4246eecf2fe882f5d4aa 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 4.4E-25 T 23-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CDG60_04940 ba3b8c11da1e4246eecf2fe882f5d4aa 152 SUPERFAMILY SSF53927 2 130 1.67E-40 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG60_04940 ba3b8c11da1e4246eecf2fe882f5d4aa 152 Gene3D G3DSA:3.40.140.10 2 152 2.3E-48 T 23-10-2018 CDG60_13825 4418f548d0b31466ba4ced0c9db2bb2f 537 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 10 510 1.4E-156 T 23-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13825 4418f548d0b31466ba4ced0c9db2bb2f 537 Pfam PF00361 Proton-conducting membrane transporter 140 441 1.9E-65 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13825 4418f548d0b31466ba4ced0c9db2bb2f 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 260 284 3.6E-34 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13825 4418f548d0b31466ba4ced0c9db2bb2f 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 348 367 3.6E-34 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13825 4418f548d0b31466ba4ced0c9db2bb2f 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 180 204 3.6E-34 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13825 4418f548d0b31466ba4ced0c9db2bb2f 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 400 426 3.6E-34 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13825 4418f548d0b31466ba4ced0c9db2bb2f 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 3.6E-34 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 Gene3D G3DSA:3.40.50.300 220 382 5.7E-102 T 23-10-2018 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 Gene3D G3DSA:1.20.120.430 125 454 5.7E-102 T 23-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 SUPERFAMILY SSF116878 124 454 1.12E-48 T 23-10-2018 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 123 1.1E-36 T 23-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 454 32.424 T 23-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 373 9.4E-23 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 Pfam PF01926 50S ribosome-binding GTPase 221 315 2.0E-24 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 Gene3D G3DSA:3.30.1360.120 2 124 1.8E-40 T 23-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 454 4.6E-107 T 23-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 Pfam PF12631 MnmE helical domain 126 451 1.1E-54 T 23-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 242 5.4E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 289 307 5.4E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_18090 b1ed62d690d242907aa73998f507a8e7 454 SUPERFAMILY SSF52540 75 373 5.84E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14675 4fb5e10ef851a6bbc0f784c224ffbbce 634 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 205 323 8.7E-14 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_14675 4fb5e10ef851a6bbc0f784c224ffbbce 634 Gene3D G3DSA:3.40.50.300 10 339 6.6E-11 T 23-10-2018 CDG60_14675 4fb5e10ef851a6bbc0f784c224ffbbce 634 SUPERFAMILY SSF52540 29 327 1.18E-8 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04190 5141136a5766f3a56562ea92be90a3dc 322 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 322 32.636 T 23-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 CDG60_04190 5141136a5766f3a56562ea92be90a3dc 322 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 320 2.8E-119 T 23-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CDG60_04190 5141136a5766f3a56562ea92be90a3dc 322 Gene3D G3DSA:3.40.718.10 1 322 8.5E-116 T 23-10-2018 CDG60_04190 5141136a5766f3a56562ea92be90a3dc 322 SUPERFAMILY SSF53659 3 322 4.32E-99 T 23-10-2018 CDG60_04190 5141136a5766f3a56562ea92be90a3dc 322 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 30 316 2.3E-101 T 23-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CDG60_17420 63ba179156737d71a589e14458346f48 116 SUPERFAMILY SSF52833 1 114 1.4E-29 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_17420 63ba179156737d71a589e14458346f48 116 Pfam PF03960 ArsC family 5 113 1.2E-15 T 23-10-2018 IPR006660 Arsenate reductase-like CDG60_17420 63ba179156737d71a589e14458346f48 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.1E-26 T 23-10-2018 IPR006504 Transcriptional regulator Spx/MgsR CDG60_17420 63ba179156737d71a589e14458346f48 116 Gene3D G3DSA:3.40.30.10 1 115 9.6E-39 T 23-10-2018 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 220 265 9.5E-8 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 5 451 8.5E-112 T 23-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 SUPERFAMILY SSF50156 89 195 1.58E-14 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 Gene3D G3DSA:2.30.42.10 127 218 3.1E-20 T 23-10-2018 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 Pfam PF13180 PDZ domain 124 195 3.9E-9 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 Gene3D G3DSA:2.30.42.10 219 308 2.1E-15 T 23-10-2018 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 Pfam PF02163 Peptidase family M50 10 436 6.6E-77 T 23-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 SMART SM00228 116 187 0.0012 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 SMART SM00228 209 278 3.3E-7 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_10215 86ebced8e5f7a0438d07f1f67fda587c 451 SUPERFAMILY SSF50156 195 286 3.29E-15 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 Pfam PF04055 Radical SAM superfamily 88 249 2.7E-14 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 31 310 1.4E-121 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 SMART SM00729 81 287 1.3E-19 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 SUPERFAMILY SSF102114 50 313 1.44E-64 T 23-10-2018 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 Gene3D G3DSA:3.20.20.70 81 277 3.1E-21 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 PIRSF PIRSF005963 1 334 4.1E-127 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 148.633 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG60_12545 3837c63f10150f69e5a1455785733ccb 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 33 70 7.2E-7 T 23-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG60_04270 90196a95df8fcc9cc68fbdadaa96126d 139 Pfam PF13673 Acetyltransferase (GNAT) domain 32 139 2.1E-22 T 23-10-2018 IPR000182 GNAT domain CDG60_04270 90196a95df8fcc9cc68fbdadaa96126d 139 SUPERFAMILY SSF55729 5 139 1.2E-34 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_04270 90196a95df8fcc9cc68fbdadaa96126d 139 Gene3D G3DSA:3.40.630.30 6 137 8.5E-40 T 23-10-2018 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 Gene3D G3DSA:3.40.50.720 269 564 1.9E-107 T 23-10-2018 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 Gene3D G3DSA:3.40.50.10380 15 268 2.4E-113 T 23-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 2.0E-100 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 SMART SM01274 81 261 1.9E-104 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 69.643 T 23-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 SUPERFAMILY SSF51735 271 562 1.9E-94 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.2E-77 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 SUPERFAMILY SSF53223 4 270 1.37E-108 T 23-10-2018 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 23-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PIRSF PIRSF000106 1 563 1.3E-225 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 SMART SM00919 271 531 1.4E-124 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PRINTS PR00072 Malic enzyme signature 183 205 1.2E-73 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PRINTS PR00072 Malic enzyme signature 87 111 1.2E-73 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PRINTS PR00072 Malic enzyme signature 267 283 1.2E-73 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PRINTS PR00072 Malic enzyme signature 408 424 1.2E-73 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PRINTS PR00072 Malic enzyme signature 242 260 1.2E-73 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PRINTS PR00072 Malic enzyme signature 298 314 1.2E-73 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_01480 2f379cd7bf359941e632f0ed8da77694 565 PRINTS PR00072 Malic enzyme signature 147 176 1.2E-73 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG60_13150 0e2320605fb7c5922bf9c99306a1ce68 444 Pfam PF13245 AAA domain 14 196 3.2E-19 T 23-10-2018 CDG60_13150 0e2320605fb7c5922bf9c99306a1ce68 444 Pfam PF13538 UvrD-like helicase C-terminal domain 398 443 7.9E-12 T 23-10-2018 IPR027785 UvrD-like helicase C-terminal domain CDG60_13150 0e2320605fb7c5922bf9c99306a1ce68 444 Gene3D G3DSA:3.40.50.300 108 235 2.0E-23 T 23-10-2018 CDG60_13150 0e2320605fb7c5922bf9c99306a1ce68 444 Gene3D G3DSA:3.40.50.300 362 444 4.5E-11 T 23-10-2018 CDG60_13150 0e2320605fb7c5922bf9c99306a1ce68 444 SUPERFAMILY SSF52540 5 443 4.62E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_13150 0e2320605fb7c5922bf9c99306a1ce68 444 Gene3D G3DSA:3.40.50.300 8 85 2.9E-12 T 23-10-2018 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 SUPERFAMILY SSF53335 3 404 7.02E-74 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 Gene3D G3DSA:3.90.120.10 201 393 8.9E-79 T 23-10-2018 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 151 165 9.2E-18 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 205 218 9.2E-18 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 9.2E-18 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 108 120 - T 23-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 386 404 - T 23-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 6 402 5.3E-50 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 405 3.7E-53 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CDG60_14120 c238ae262e08bc1d8bd0e19bac3fa71d 412 Gene3D G3DSA:3.40.50.150 7 398 8.9E-79 T 23-10-2018 CDG60_03655 1c0a2d4718f4ccaa912e863d5f78fca5 413 SUPERFAMILY SSF111352 40 400 1.16E-42 T 23-10-2018 CDG60_03655 1c0a2d4718f4ccaa912e863d5f78fca5 413 Pfam PF00909 Ammonium Transporter Family 44 407 1.6E-43 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDG60_03655 1c0a2d4718f4ccaa912e863d5f78fca5 413 Gene3D G3DSA:1.10.3430.10 28 412 1.2E-54 T 23-10-2018 IPR029020 Ammonium/urea transporter CDG60_03675 463070168aaacc1a94032700cda6997f 262 SUPERFAMILY SSF52096 3 243 2.09E-64 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_03675 463070168aaacc1a94032700cda6997f 262 Gene3D G3DSA:3.90.226.10 2 249 2.1E-64 T 23-10-2018 CDG60_03675 463070168aaacc1a94032700cda6997f 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 219 1.0E-42 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG60_03675 463070168aaacc1a94032700cda6997f 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 518 1.5E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Pfam PF01627 Hpt domain 834 925 5.3E-10 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SMART SM00388 288 354 1.7E-23 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Gene3D G3DSA:1.20.120.160 810 934 1.5E-21 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Gene3D G3DSA:3.30.565.10 353 526 2.5E-48 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SUPERFAMILY SSF52172 662 795 7.12E-34 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SMART SM00448 664 787 5.3E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 2.5E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 2.5E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 2.5E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Pfam PF00072 Response regulator receiver domain 666 787 3.5E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SUPERFAMILY SSF47384 274 355 1.24E-22 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Gene3D G3DSA:3.40.50.2300 649 797 1.5E-39 T 23-10-2018 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SUPERFAMILY SSF55874 343 517 4.06E-40 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Gene3D G3DSA:1.10.287.130 250 352 4.4E-27 T 23-10-2018 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SMART SM00387 401 522 2.3E-34 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 354 3.5E-21 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SUPERFAMILY SSF47226 770 891 6.54E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG60_03680 7c90d0ccc5ad7b04089bf4dfc2852906 936 SMART SM00073 823 920 3.9E-5 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 SMART SM00984 300 387 1.3E-12 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.9E-27 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 PIRSF PIRSF000124 1 389 4.0E-140 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 PIRSF PIRSF500134 1 343 3.5E-124 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 PIRSF PIRSF500134 338 389 0.023 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 Gene3D G3DSA:3.40.50.720 1 193 3.5E-62 T 23-10-2018 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 SUPERFAMILY SSF48179 191 287 2.55E-30 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 2.4E-106 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 SUPERFAMILY SSF52413 283 387 3.01E-27 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 Gene3D G3DSA:1.20.5.100 194 221 2.1E-20 T 23-10-2018 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 SUPERFAMILY SSF51735 1 194 6.33E-50 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 4.3E-35 T 23-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 Gene3D G3DSA:3.40.50.720 222 388 8.1E-67 T 23-10-2018 CDG60_03770 be78a1ab516e6ed50483b487ef7a6d6c 389 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 370 3.7E-7 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 Gene3D G3DSA:3.40.1190.10 94 302 8.9E-61 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 381 4.8E-7 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 SUPERFAMILY SSF53623 98 300 1.02E-51 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 445 1.3E-120 T 23-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 Pfam PF08245 Mur ligase middle domain 110 282 1.4E-25 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 447 34.03 T 23-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 Gene3D G3DSA:3.90.190.20 303 443 1.2E-42 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 SUPERFAMILY SSF53244 302 447 2.98E-43 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 SUPERFAMILY SSF51984 10 93 2.88E-17 T 23-10-2018 CDG60_02065 ea5b377f4f8a6dae827fbcbd1d4034a5 448 Gene3D G3DSA:3.40.50.720 8 93 2.1E-22 T 23-10-2018 CDG60_06850 8809f1ce161405c1afe8a0bbe04da5b6 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 266 5.9E-94 T 23-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDG60_06850 8809f1ce161405c1afe8a0bbe04da5b6 277 SUPERFAMILY SSF161098 14 263 3.27E-55 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_06850 8809f1ce161405c1afe8a0bbe04da5b6 277 Gene3D G3DSA:1.10.3720.10 13 272 2.3E-68 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_06850 8809f1ce161405c1afe8a0bbe04da5b6 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 272 1.1E-26 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_06850 8809f1ce161405c1afe8a0bbe04da5b6 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 270 6.6E-127 T 23-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CDG60_04390 e21536e7c0055ce3c4a3b2f39c5dc6a2 274 Pfam PF02673 Bacitracin resistance protein BacA 9 262 2.7E-79 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG60_04390 e21536e7c0055ce3c4a3b2f39c5dc6a2 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 267 17.389 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG60_04390 e21536e7c0055ce3c4a3b2f39c5dc6a2 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 6.4E-70 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 Gene3D G3DSA:2.40.30.10 34 132 4.3E-16 T 23-10-2018 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 Pfam PF00970 Oxidoreductase FAD-binding domain 44 134 2.7E-7 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 Gene3D G3DSA:3.10.20.30 265 354 4.7E-14 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 Pfam PF00175 Oxidoreductase NAD-binding domain 146 245 3.8E-12 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 SUPERFAMILY SSF54292 252 354 5.11E-16 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 87 94 1.3E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 164 1.3E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 231 239 1.3E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 129 138 1.3E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 276 323 1.5E-4 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 SUPERFAMILY SSF52343 123 249 2.88E-24 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 SUPERFAMILY SSF63380 32 137 5.32E-17 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_11635 a5cfb4fe2cf327c9b022fa43aa37c852 354 Gene3D G3DSA:3.40.50.80 135 264 5.1E-24 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 SUPERFAMILY SSF55186 64 240 4.97E-64 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.79 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Pfam PF03129 Anticodon binding domain 540 629 1.2E-20 T 23-10-2018 IPR004154 Anticodon-binding CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 3.7E-225 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 SMART SM00863 169 218 1.0E-19 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Gene3D G3DSA:3.30.54.20 130 186 6.4E-61 T 23-10-2018 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 7.8E-46 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 218 4.7E-14 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Gene3D G3DSA:3.10.20.30 3 63 6.2E-22 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 4.3E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 4.3E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 4.3E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 4.3E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 4.3E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Gene3D G3DSA:3.40.50.800 531 637 1.0E-29 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Gene3D G3DSA:3.30.930.10 222 530 1.4E-128 T 23-10-2018 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Gene3D G3DSA:3.30.980.10 69 221 6.4E-61 T 23-10-2018 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 SUPERFAMILY SSF52954 528 632 9.82E-31 T 23-10-2018 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 SUPERFAMILY SSF55681 242 525 2.49E-98 T 23-10-2018 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 SUPERFAMILY SSF81271 3 61 3.92E-16 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG60_15050 252cfd6a6e702c21701ad8267c1827c2 640 Pfam PF02824 TGS domain 4 61 5.3E-12 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDG60_05835 322d1be303c2c6b0ba0fac07aa1024b3 439 SUPERFAMILY SSF103473 18 432 5.1E-62 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_05835 322d1be303c2c6b0ba0fac07aa1024b3 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_05835 322d1be303c2c6b0ba0fac07aa1024b3 439 Gene3D G3DSA:1.20.1250.20 18 439 2.0E-66 T 23-10-2018 CDG60_05835 322d1be303c2c6b0ba0fac07aa1024b3 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_05835 322d1be303c2c6b0ba0fac07aa1024b3 439 Pfam PF00083 Sugar (and other) transporter 28 231 1.1E-28 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG60_03000 8cbda4df9ea2f0066211309e01c274a3 108 Pfam PF00355 Rieske [2Fe-2S] domain 4 93 2.9E-19 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG60_03000 8cbda4df9ea2f0066211309e01c274a3 108 SUPERFAMILY SSF50022 1 105 5.5E-29 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_03000 8cbda4df9ea2f0066211309e01c274a3 108 Gene3D G3DSA:2.102.10.10 1 107 2.4E-34 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 SUPERFAMILY SSF54211 234 405 1.8E-59 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Gene3D G3DSA:3.40.50.670 705 821 9.3E-27 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Pfam PF00204 DNA gyrase B 234 403 1.1E-61 T 23-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 SMART SM00387 45 189 1.6E-30 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Pfam PF01751 Toprim domain 432 544 2.8E-17 T 23-10-2018 IPR006171 TOPRIM domain CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Gene3D G3DSA:3.30.230.10 233 411 8.3E-72 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 SMART SM00433 49 816 7.0E-268 T 23-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 752 812 7.6E-30 T 23-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 538 550 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 518 535 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 433 447 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 500 516 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 755 771 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 49 64 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 84 97 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 281 294 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR00418 DNA topoisomerase II family signature 127 141 1.3E-71 T 23-10-2018 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 19 818 1.3E-301 T 23-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Gene3D G3DSA:3.30.565.10 15 232 4.1E-91 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 SUPERFAMILY SSF55874 19 231 6.94E-74 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 187 8.7E-22 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Gene3D G3DSA:3.40.50.670 412 608 8.0E-73 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 SUPERFAMILY SSF56719 407 817 9.15E-87 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 23-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 19 29 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 483 492 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 325 341 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 194 209 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 209 222 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 387 407 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 255 273 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 776 788 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 792 808 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 PRINTS PR01159 DNA gyrase subunit B signature 373 387 2.0E-71 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 822 101.032 T 23-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_00760 df307be8c45e0a89bf8839a3fa43e0bb 822 Gene3D G3DSA:3.10.20.690 609 702 9.1E-7 T 23-10-2018 CDG60_05125 80863c77e39c188efb27414fc7585717 554 Gene3D G3DSA:3.40.720.10 225 551 6.1E-86 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_05125 80863c77e39c188efb27414fc7585717 554 Pfam PF08019 Domain of unknown function (DUF1705) 63 211 1.4E-40 T 23-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CDG60_05125 80863c77e39c188efb27414fc7585717 554 SUPERFAMILY SSF53649 237 536 3.92E-22 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_05125 80863c77e39c188efb27414fc7585717 554 Pfam PF00884 Sulfatase 241 532 8.2E-54 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG60_00825 9fdeff63e35b9a66b6b38c865b6313a7 280 SUPERFAMILY SSF161098 81 267 6.93E-38 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_00825 9fdeff63e35b9a66b6b38c865b6313a7 280 Gene3D G3DSA:1.10.3720.10 74 273 7.1E-31 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_00825 9fdeff63e35b9a66b6b38c865b6313a7 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 272 2.3E-27 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_08365 dd76b1c6afc0a2a2640337c4704c5cd2 149 Pfam PF13673 Acetyltransferase (GNAT) domain 21 138 5.6E-14 T 23-10-2018 IPR000182 GNAT domain CDG60_08365 dd76b1c6afc0a2a2640337c4704c5cd2 149 Gene3D G3DSA:3.40.630.30 2 146 2.7E-33 T 23-10-2018 CDG60_08365 dd76b1c6afc0a2a2640337c4704c5cd2 149 SUPERFAMILY SSF55729 5 144 3.65E-21 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_10540 3b9b640f06f2b275f60c9b35e2b5a68c 393 Gene3D G3DSA:3.30.450.40 25 205 2.0E-36 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG60_10540 3b9b640f06f2b275f60c9b35e2b5a68c 393 SUPERFAMILY SSF46894 220 283 6.24E-5 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_07085 963b789c4d53dd5b5d41ba63719b9ccd 457 Gene3D G3DSA:3.40.640.10 71 338 2.4E-133 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_07085 963b789c4d53dd5b5d41ba63719b9ccd 457 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 455 1.3E-247 T 23-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 CDG60_07085 963b789c4d53dd5b5d41ba63719b9ccd 457 SUPERFAMILY SSF53383 24 449 1.07E-119 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_07085 963b789c4d53dd5b5d41ba63719b9ccd 457 Gene3D G3DSA:3.90.1150.10 23 441 2.4E-133 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_07085 963b789c4d53dd5b5d41ba63719b9ccd 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_07085 963b789c4d53dd5b5d41ba63719b9ccd 457 Pfam PF00202 Aminotransferase class-III 34 447 1.7E-93 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_10570 7ed98e9be8e8d5fa75bf043fb8146457 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.4E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_10570 7ed98e9be8e8d5fa75bf043fb8146457 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.4E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_10570 7ed98e9be8e8d5fa75bf043fb8146457 189 SUPERFAMILY SSF46689 3 74 9.23E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_10570 7ed98e9be8e8d5fa75bf043fb8146457 189 Gene3D G3DSA:1.10.357.10 55 179 3.6E-28 T 23-10-2018 CDG60_10570 7ed98e9be8e8d5fa75bf043fb8146457 189 SUPERFAMILY SSF48498 84 180 2.22E-19 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_10570 7ed98e9be8e8d5fa75bf043fb8146457 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.0E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_10570 7ed98e9be8e8d5fa75bf043fb8146457 189 Gene3D G3DSA:1.10.10.60 10 54 2.3E-11 T 23-10-2018 CDG60_17305 9fac4b6d1e7cdeaea6d04d41044a459f 567 Pfam PF01368 DHH family 71 224 2.1E-11 T 23-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CDG60_17305 9fac4b6d1e7cdeaea6d04d41044a459f 567 Pfam PF02272 DHHA1 domain 315 446 8.8E-26 T 23-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CDG60_17305 9fac4b6d1e7cdeaea6d04d41044a459f 567 Gene3D G3DSA:3.10.310.30 319 451 1.0E-32 T 23-10-2018 CDG60_17305 9fac4b6d1e7cdeaea6d04d41044a459f 567 Gene3D G3DSA:3.90.1640.30 46 318 6.4E-89 T 23-10-2018 CDG60_17305 9fac4b6d1e7cdeaea6d04d41044a459f 567 SUPERFAMILY SSF64182 51 449 3.79E-110 T 23-10-2018 IPR038763 DHH phosphoesterase superfamily CDG60_17305 9fac4b6d1e7cdeaea6d04d41044a459f 567 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 562 8.8E-155 T 23-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 Gene3D G3DSA:3.40.30.10 1 108 4.0E-33 T 23-10-2018 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 SUPERFAMILY SSF52833 3 107 8.41E-36 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-7 T 23-10-2018 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-7 T 23-10-2018 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-7 T 23-10-2018 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 PIRSF PIRSF000077 2 108 5.3E-38 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.1E-35 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG60_14955 f6f162919bff35eb2238612bc7d56b55 108 Pfam PF00085 Thioredoxin 5 106 8.3E-33 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 Pfam PF00574 Clp protease 20 199 8.9E-89 T 23-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 SUPERFAMILY SSF52096 18 199 5.33E-76 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 6.1E-106 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 23-10-2018 IPR018215 ClpP, Ser active site CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 9.3E-52 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 9.3E-52 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 9.3E-52 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 9.3E-52 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 9.3E-52 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 23-10-2018 IPR033135 ClpP, histidine active site CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.252 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG60_15590 6cd0054d958e21cf38b8eed04d809625 201 Gene3D G3DSA:3.90.226.10 3 201 4.5E-84 T 23-10-2018 CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 SUPERFAMILY SSF54523 8 108 8.63E-18 T 23-10-2018 CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 Gene3D G3DSA:3.30.700.10 8 153 1.4E-17 T 23-10-2018 CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.8E-9 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 1.8E-9 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.5E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 27 4.6E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16480 e57185f22577dba61bcc7b3c790f3b85 169 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 76 4.5E-6 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG60_09310 1c5530ecd47738915b1608e3d5c6a306 124 SUPERFAMILY SSF51230 3 122 3.06E-44 T 23-10-2018 IPR011053 Single hybrid motif CDG60_09310 1c5530ecd47738915b1608e3d5c6a306 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 3.2E-49 T 23-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDG60_09310 1c5530ecd47738915b1608e3d5c6a306 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 123 36.286 T 23-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDG60_09310 1c5530ecd47738915b1608e3d5c6a306 124 Gene3D G3DSA:2.40.50.100 2 124 2.2E-48 T 23-10-2018 CDG60_09310 1c5530ecd47738915b1608e3d5c6a306 124 Pfam PF01597 Glycine cleavage H-protein 7 122 9.0E-45 T 23-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 SUPERFAMILY SSF53244 314 452 6.26E-38 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 363 2.2E-10 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 Pfam PF08245 Mur ligase middle domain 108 295 2.0E-22 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 Gene3D G3DSA:3.40.1190.10 91 317 7.5E-57 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 SUPERFAMILY SSF53623 97 312 4.06E-51 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 Gene3D G3DSA:3.90.190.20 318 454 7.6E-31 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 453 3.5E-205 T 23-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 Pfam PF01225 Mur ligase family, catalytic domain 2 99 5.3E-17 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 57.412 T 23-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 SUPERFAMILY SSF51984 1 90 2.49E-21 T 23-10-2018 CDG60_18005 8faa6a5c77bb29a175efd9cac58709b6 455 Gene3D G3DSA:3.40.50.720 1 90 6.1E-34 T 23-10-2018 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 169 181 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 351 372 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 464 485 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 230 249 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 50 75 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 127 151 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 327 342 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 123 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 219 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 414 433 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 281 302 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 404 6.9E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 5 650 0.0 T 23-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 59 507 1.9E-136 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 Gene3D G3DSA:1.20.210.10 33 568 6.2E-186 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 SUPERFAMILY SSF81442 46 562 4.45E-175 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07320 20ce9a781720d7b17521e1d639d88cfa 664 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 283 337 - T 23-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07110 b129510112f851e8cf1fc2086728c1c6 464 SUPERFAMILY SSF161098 238 450 1.14E-35 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_07110 b129510112f851e8cf1fc2086728c1c6 464 Gene3D G3DSA:1.10.3720.10 236 462 1.5E-33 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_07110 b129510112f851e8cf1fc2086728c1c6 464 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 221 461 6.8E-65 T 23-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CDG60_07110 b129510112f851e8cf1fc2086728c1c6 464 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 260 461 6.1E-21 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_07110 b129510112f851e8cf1fc2086728c1c6 464 Pfam PF11812 Domain of unknown function (DUF3333) 32 195 8.9E-42 T 23-10-2018 IPR024573 Domain of unknown function DUF3333 CDG60_10370 895c7a45bc2aba45cc8a17c0e6e3dd68 334 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 326 3.3E-67 T 23-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDG60_10370 895c7a45bc2aba45cc8a17c0e6e3dd68 334 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 17 327 8.1E-97 T 23-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDG60_10370 895c7a45bc2aba45cc8a17c0e6e3dd68 334 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 327 33.959 T 23-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDG60_10370 895c7a45bc2aba45cc8a17c0e6e3dd68 334 SUPERFAMILY SSF52540 51 178 1.31E-11 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 SUPERFAMILY SSF55347 131 269 4.64E-60 T 23-10-2018 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 3.1E-10 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 SUPERFAMILY SSF51735 1 155 4.25E-27 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 293 5.4E-144 T 23-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 Gene3D G3DSA:3.40.50.720 7 286 1.6E-123 T 23-10-2018 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 Gene3D G3DSA:3.30.360.10 131 274 1.6E-123 T 23-10-2018 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 PIRSF PIRSF015689 1 299 1.2E-132 T 23-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 299 146.691 T 23-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 SMART SM00859 5 120 7.7E-6 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG60_02960 8f3c6941e5ce3b356dcdea5e1a3cd7ee 299 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 268 1.0E-64 T 23-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 Pfam PF00633 Helix-hairpin-helix motif 99 125 5.3E-8 T 23-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 ProSitePatterns PS01155 Endonuclease III family signature. 100 127 - T 23-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 Gene3D G3DSA:3.90.79.10 223 344 7.9E-15 T 23-10-2018 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 162 6.3E-17 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 Gene3D G3DSA:1.10.1670.10 9 209 1.7E-82 T 23-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 SUPERFAMILY SSF55811 218 341 2.98E-20 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 SMART SM00525 189 209 0.0088 T 23-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 Gene3D G3DSA:1.10.340.30 21 130 1.7E-82 T 23-10-2018 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 SUPERFAMILY SSF48150 6 223 2.67E-71 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 23-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 Pfam PF14815 NUDIX domain 233 340 8.2E-20 T 23-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 273 1.3E-104 T 23-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CDG60_17720 167bbd1f275ab85189248b94cb887baf 344 SMART SM00478 39 188 4.0E-36 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG60_03970 d377c20e8da808e34f07f10bcc7bdbf6 192 SUPERFAMILY SSF89028 7 185 4.32E-55 T 23-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG60_03970 d377c20e8da808e34f07f10bcc7bdbf6 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 186 6.0E-75 T 23-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG60_03970 d377c20e8da808e34f07f10bcc7bdbf6 192 Pfam PF01923 Cobalamin adenosyltransferase 8 172 7.6E-53 T 23-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG60_03970 d377c20e8da808e34f07f10bcc7bdbf6 192 Gene3D G3DSA:1.20.1200.10 17 189 1.3E-53 T 23-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG60_03970 d377c20e8da808e34f07f10bcc7bdbf6 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 185 3.2E-50 T 23-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 SMART SM00924 29 130 8.2E-20 T 23-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 Gene3D G3DSA:3.10.580.10 126 254 1.2E-41 T 23-10-2018 CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 TIGRFAM TIGR00400 mgtE: magnesium transporter 10 445 1.0E-104 T 23-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 Gene3D G3DSA:1.10.357.20 269 445 6.8E-53 T 23-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 Gene3D G3DSA:1.25.60.10 4 125 9.9E-15 T 23-10-2018 IPR038076 MgtE, N-terminal domain superfamily CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 SMART SM00116 201 249 2.3 T 23-10-2018 IPR000644 CBS domain CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 SMART SM00116 137 190 3.5 T 23-10-2018 IPR000644 CBS domain CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 SUPERFAMILY SSF158791 4 127 2.09E-19 T 23-10-2018 CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 Pfam PF03448 MgtE intracellular N domain 31 127 1.2E-17 T 23-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 SUPERFAMILY SSF161093 274 444 7.85E-48 T 23-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 Pfam PF00571 CBS domain 130 186 1.3E-6 T 23-10-2018 IPR000644 CBS domain CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 Pfam PF00571 CBS domain 196 246 1.1E-6 T 23-10-2018 IPR000644 CBS domain CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 SUPERFAMILY SSF54631 129 266 5.18E-30 T 23-10-2018 CDG60_05900 f92cdcabb1886ed48eb86642f791b968 449 Pfam PF01769 Divalent cation transporter 318 437 6.0E-25 T 23-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CDG60_16100 f487587906d541d464f4e59114e2fb90 132 SUPERFAMILY SSF55811 3 125 4.06E-25 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_16100 f487587906d541d464f4e59114e2fb90 132 Pfam PF00293 NUDIX domain 6 124 1.0E-16 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_16100 f487587906d541d464f4e59114e2fb90 132 Gene3D G3DSA:3.90.79.10 2 127 1.3E-23 T 23-10-2018 CDG60_06245 414e6d5e809c3f0f90c4a905d2047bac 419 SUPERFAMILY SSF55073 252 410 7.69E-47 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_06245 414e6d5e809c3f0f90c4a905d2047bac 419 SMART SM00267 236 411 1.9E-55 T 23-10-2018 IPR000160 GGDEF domain CDG60_06245 414e6d5e809c3f0f90c4a905d2047bac 419 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 410 1.5E-51 T 23-10-2018 IPR000160 GGDEF domain CDG60_06245 414e6d5e809c3f0f90c4a905d2047bac 419 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 407 1.1E-48 T 23-10-2018 IPR000160 GGDEF domain CDG60_06245 414e6d5e809c3f0f90c4a905d2047bac 419 Gene3D G3DSA:3.30.70.270 238 412 2.1E-53 T 23-10-2018 CDG60_01600 79be8ab633e2b3f8e9e798aed388afac 249 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 1.5E-9 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_01600 79be8ab633e2b3f8e9e798aed388afac 249 SUPERFAMILY SSF51161 48 208 4.02E-35 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_01600 79be8ab633e2b3f8e9e798aed388afac 249 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 142 170 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG60_01600 79be8ab633e2b3f8e9e798aed388afac 249 Gene3D G3DSA:2.160.10.10 37 231 2.5E-51 T 23-10-2018 CDG60_09190 79d10e18948d4b72ec27c69803c22d80 76 Gene3D G3DSA:1.10.10.60 1 75 1.2E-15 T 23-10-2018 CDG60_09190 79d10e18948d4b72ec27c69803c22d80 76 SUPERFAMILY SSF46689 25 72 5.82E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_09190 79d10e18948d4b72ec27c69803c22d80 76 Pfam PF12833 Helix-turn-helix domain 1 72 2.5E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_09190 79d10e18948d4b72ec27c69803c22d80 76 SMART SM00342 1 71 1.0E-7 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 SUPERFAMILY SSF53720 8 420 5.24E-122 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 Gene3D G3DSA:3.40.309.10 229 378 1.1E-164 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 Gene3D G3DSA:3.40.605.10 15 417 1.1E-164 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 349 - T 23-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 41.419 T 23-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 PIRSF PIRSF000151 1 421 6.1E-181 T 23-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 8.4E-155 T 23-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 Pfam PF00171 Aldehyde dehydrogenase family 313 377 2.1E-7 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_15545 97bfb6ecbebec189c1f398436b49b427 421 Pfam PF00171 Aldehyde dehydrogenase family 11 291 2.2E-18 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_02190 2c27b799d457864da344beae185d9ac1 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 188 2.1E-9 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_02190 2c27b799d457864da344beae185d9ac1 222 Gene3D G3DSA:3.40.50.1000 12 216 6.3E-56 T 23-10-2018 IPR023214 HAD superfamily CDG60_02190 2c27b799d457864da344beae185d9ac1 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 2.3E-32 T 23-10-2018 CDG60_02190 2c27b799d457864da344beae185d9ac1 222 SUPERFAMILY SSF56784 8 221 1.15E-52 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_02190 2c27b799d457864da344beae185d9ac1 222 Gene3D G3DSA:1.10.150.240 24 94 6.3E-56 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG60_04015 f85e8c5eff9b1bc280aee46ce45c64a7 291 PIRSF PIRSF007580 5 278 1.1E-63 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_04015 f85e8c5eff9b1bc280aee46ce45c64a7 291 Pfam PF10118 Predicted metal-dependent hydrolase 16 260 2.2E-71 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_04015 f85e8c5eff9b1bc280aee46ce45c64a7 291 SUPERFAMILY SSF47240 58 224 1.59E-6 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_08020 5227bc64e5e32bab1e26028421d2d73e 360 SUPERFAMILY SSF53335 3 359 1.04E-52 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_08020 5227bc64e5e32bab1e26028421d2d73e 360 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 360 42.549 T 23-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CDG60_08020 5227bc64e5e32bab1e26028421d2d73e 360 Gene3D G3DSA:3.40.1350.30 39 181 1.2E-131 T 23-10-2018 CDG60_08020 5227bc64e5e32bab1e26028421d2d73e 360 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 4 359 2.5E-162 T 23-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CDG60_08020 5227bc64e5e32bab1e26028421d2d73e 360 Gene3D G3DSA:3.40.50.150 7 356 1.2E-131 T 23-10-2018 CDG60_08020 5227bc64e5e32bab1e26028421d2d73e 360 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 4 359 1.8E-165 T 23-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CDG60_08020 5227bc64e5e32bab1e26028421d2d73e 360 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 293 322 - T 23-10-2018 IPR030390 RNA methyltransferase TrmA, active site CDG60_17140 ebedd481c519bdadfb59dcc4609b29f8 94 Pfam PF03795 YCII-related domain 8 79 2.4E-7 T 23-10-2018 IPR005545 YCII-related CDG60_17140 ebedd481c519bdadfb59dcc4609b29f8 94 SUPERFAMILY SSF54909 1 69 4.02E-9 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_01645 cb7e5e88751ae3d8e4fd6e4d1e567290 253 Pfam PF12833 Helix-turn-helix domain 179 251 9.5E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_01645 cb7e5e88751ae3d8e4fd6e4d1e567290 253 SUPERFAMILY SSF51182 11 175 1.65E-9 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_01645 cb7e5e88751ae3d8e4fd6e4d1e567290 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG60_01645 cb7e5e88751ae3d8e4fd6e4d1e567290 253 SMART SM00342 169 251 5.8E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_01645 cb7e5e88751ae3d8e4fd6e4d1e567290 253 SUPERFAMILY SSF46689 206 252 9.41E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_01645 cb7e5e88751ae3d8e4fd6e4d1e567290 253 Gene3D G3DSA:1.10.10.60 152 253 1.5E-16 T 23-10-2018 CDG60_08400 3b8e416a0682932b89f3fb85daf9f4d4 216 Pfam PF02254 TrkA-N domain 4 119 9.7E-28 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDG60_08400 3b8e416a0682932b89f3fb85daf9f4d4 216 SUPERFAMILY SSF116726 131 213 1.57E-6 T 23-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CDG60_08400 3b8e416a0682932b89f3fb85daf9f4d4 216 Gene3D G3DSA:3.40.50.720 2 139 1.8E-37 T 23-10-2018 CDG60_08400 3b8e416a0682932b89f3fb85daf9f4d4 216 SUPERFAMILY SSF51735 3 133 4.08E-35 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 Gene3D G3DSA:3.40.50.300 169 493 2.5E-56 T 23-10-2018 CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 Gene3D G3DSA:3.30.230.10 16 168 1.8E-6 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 491 1.2E-185 T 23-10-2018 IPR004482 Mg chelatase-related protein CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 SUPERFAMILY SSF54211 11 169 1.59E-31 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 2.9E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 314 327 2.9E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 338 350 2.9E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 286 300 2.9E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 SMART SM00382 210 389 2.1E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 491 3.0E-29 T 23-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 392 1.1E-94 T 23-10-2018 IPR000523 Magnesium chelatase ChlI domain CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 SUPERFAMILY SSF52540 189 491 4.39E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01925 a7895d7d3637f2aead487205a3df5f81 495 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 141 6.0E-43 T 23-10-2018 CDG60_07450 a637f417fdc71b34ba8c2cc67631fa7f 567 Pfam PF03814 Potassium-transporting ATPase A subunit 6 562 4.6E-210 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG60_07450 a637f417fdc71b34ba8c2cc67631fa7f 567 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 4 563 5.7E-162 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG60_07450 a637f417fdc71b34ba8c2cc67631fa7f 567 PIRSF PIRSF001294 1 566 1.6E-214 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG60_07450 a637f417fdc71b34ba8c2cc67631fa7f 567 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 564 27.723 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG60_00210 ba7ce6b375a0b0e141abb0290ee3c304 459 Pfam PF03743 Bacterial conjugation TrbI-like protein 275 453 1.4E-51 T 23-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CDG60_00210 ba7ce6b375a0b0e141abb0290ee3c304 459 Gene3D G3DSA:2.40.128.260 278 451 3.2E-52 T 23-10-2018 CDG60_00210 ba7ce6b375a0b0e141abb0290ee3c304 459 Gene3D G3DSA:1.10.1200.160 399 432 3.2E-52 T 23-10-2018 CDG60_15240 cad94df69f5232ba9cf93faa4a3bb2af 331 Gene3D G3DSA:3.40.50.300 6 134 5.2E-21 T 23-10-2018 CDG60_15240 cad94df69f5232ba9cf93faa4a3bb2af 331 SUPERFAMILY SSF48019 208 325 1.6E-22 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDG60_15240 cad94df69f5232ba9cf93faa4a3bb2af 331 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 19 322 9.6E-42 T 23-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CDG60_15240 cad94df69f5232ba9cf93faa4a3bb2af 331 Gene3D G3DSA:1.10.8.60 146 209 1.8E-7 T 23-10-2018 CDG60_15240 cad94df69f5232ba9cf93faa4a3bb2af 331 Gene3D G3DSA:1.20.272.10 210 330 5.6E-21 T 23-10-2018 CDG60_15240 cad94df69f5232ba9cf93faa4a3bb2af 331 Pfam PF06144 DNA polymerase III, delta subunit 20 181 4.7E-11 T 23-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CDG60_15240 cad94df69f5232ba9cf93faa4a3bb2af 331 SUPERFAMILY SSF52540 6 206 2.66E-22 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04715 464299be353cf647a7f9eba55af7f6ef 417 Pfam PF00149 Calcineurin-like phosphoesterase 4 234 2.7E-15 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG60_04715 464299be353cf647a7f9eba55af7f6ef 417 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 289 387 7.9E-8 T 23-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CDG60_04715 464299be353cf647a7f9eba55af7f6ef 417 SUPERFAMILY SSF56300 4 342 4.79E-49 T 23-10-2018 CDG60_04715 464299be353cf647a7f9eba55af7f6ef 417 Gene3D G3DSA:3.60.21.10 1 279 2.8E-74 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG60_04715 464299be353cf647a7f9eba55af7f6ef 417 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 4 260 2.3E-55 T 23-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CDG60_11460 dc115722dae006188a2e14830b0dcd92 426 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 40 390 3.9E-64 T 23-10-2018 IPR013397 CRISPR-associated protein Csy1 CDG60_11460 dc115722dae006188a2e14830b0dcd92 426 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 40 407 4.2E-104 T 23-10-2018 IPR013397 CRISPR-associated protein Csy1 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 SUPERFAMILY SSF51735 2 164 2.59E-54 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 SUPERFAMILY SSF55347 149 317 3.83E-45 T 23-10-2018 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 141 3.1E-38 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 320 2.1E-19 T 23-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 Gene3D G3DSA:3.40.50.720 4 335 9.9E-127 T 23-10-2018 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 SMART SM00859 3 141 1.3E-59 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 349 2.1E-127 T 23-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 Gene3D G3DSA:3.30.360.10 147 317 9.9E-127 T 23-10-2018 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 23-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_08430 2618fbd8d18dbaaf5925573c7d212e39 349 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 343 42.329 T 23-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 SUPERFAMILY SSF55653 60 148 2.62E-25 T 23-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 SUPERFAMILY SSF55658 1 56 1.46E-17 T 23-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.274 T 23-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 2 148 6.4E-47 T 23-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 3.4E-25 T 23-10-2018 IPR020069 Ribosomal protein L9, C-terminal CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 2 46 2.1E-20 T 23-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 Gene3D G3DSA:3.10.430.100 61 148 2.2E-28 T 23-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 Gene3D G3DSA:3.40.5.10 1 50 1.9E-21 T 23-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_11105 4d50791f38e224c3fae689c6173ce7ff 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_08685 cf5ee89d1e851d3e7f349a6b29abbbe2 106 Gene3D G3DSA:1.10.3230.30 1 102 3.1E-8 T 23-10-2018 CDG60_08685 cf5ee89d1e851d3e7f349a6b29abbbe2 106 Pfam PF05135 Phage gp6-like head-tail connector protein 5 101 2.9E-13 T 23-10-2018 IPR021146 Phage gp6-like head-tail connector protein CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 SUPERFAMILY SSF81271 279 360 4.36E-37 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 PIRSF PIRSF006641 1 363 4.7E-155 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 Gene3D G3DSA:3.40.50.300 4 278 7.5E-152 T 23-10-2018 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 Pfam PF01926 50S ribosome-binding GTPase 5 127 9.4E-23 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.1E-40 T 23-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.777 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 SUPERFAMILY SSF52540 3 301 1.33E-82 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 5.7E-159 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 Gene3D G3DSA:1.10.150.300 113 200 7.5E-152 T 23-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 CDG60_10730 4a3b5dc048cf7d513033b85054751954 363 Gene3D G3DSA:3.10.20.30 48 361 7.5E-152 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_01080 58a43ef90c6851311888fb3a72610f74 195 Gene3D G3DSA:2.160.10.10 5 151 1.7E-46 T 23-10-2018 CDG60_01080 58a43ef90c6851311888fb3a72610f74 195 SUPERFAMILY SSF51161 4 158 1.39E-43 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_01080 58a43ef90c6851311888fb3a72610f74 195 Gene3D G3DSA:2.20.70.110 153 189 3.7E-16 T 23-10-2018 CDG60_01080 58a43ef90c6851311888fb3a72610f74 195 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 136 5.6E-6 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_01080 58a43ef90c6851311888fb3a72610f74 195 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 49 3.4E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_01080 58a43ef90c6851311888fb3a72610f74 195 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 51 75 2.4E-4 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 1.2E-97 T 23-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 1.2E-6 T 23-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Gene3D G3DSA:3.40.50.720 1 113 3.3E-29 T 23-10-2018 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.147 T 23-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 SUPERFAMILY SSF53790 212 456 1.57E-83 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Pfam PF13241 Putative NAD(P)-binding 8 116 7.7E-27 T 23-10-2018 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Gene3D G3DSA:3.40.1010.10 215 331 9.3E-47 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 208 3.8E-62 T 23-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 SUPERFAMILY SSF75615 115 211 3.4E-26 T 23-10-2018 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 SUPERFAMILY SSF51735 1 113 4.82E-20 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Gene3D G3DSA:1.10.8.210 150 211 1.2E-8 T 23-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 2.7E-53 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Pfam PF10414 Sirohaem synthase dimerisation region 152 208 3.9E-18 T 23-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 PIRSF PIRSF036426 1 457 3.1E-199 T 23-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Gene3D G3DSA:3.30.950.10 332 457 3.5E-48 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDG60_05300 6df418ed0af7ea93478a8a10d11d173a 457 Gene3D G3DSA:3.30.160.110 114 149 4.5E-15 T 23-10-2018 CDG60_13525 0addbcee71e0ae4f03371ba9fbce0dcb 724 Pfam PF13515 Fusaric acid resistance protein-like 410 530 1.2E-19 T 23-10-2018 CDG60_13525 0addbcee71e0ae4f03371ba9fbce0dcb 724 Pfam PF12805 FUSC-like inner membrane protein yccS 68 349 2.0E-89 T 23-10-2018 IPR032692 Integral membrane protein YccS, N-terminal CDG60_13525 0addbcee71e0ae4f03371ba9fbce0dcb 724 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 708 4.3E-230 T 23-10-2018 IPR010020 Integral membrane protein, YccS/YhfK CDG60_13525 0addbcee71e0ae4f03371ba9fbce0dcb 724 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 708 1.1E-250 T 23-10-2018 IPR010019 Integral membrane protein, YccS CDG60_13525 0addbcee71e0ae4f03371ba9fbce0dcb 724 SUPERFAMILY SSF103473 386 533 1.22E-5 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_05960 a773111c315987e35658c270ff8b7c81 94 Gene3D G3DSA:1.10.20.30 1 46 1.3E-7 T 23-10-2018 CDG60_05960 a773111c315987e35658c270ff8b7c81 94 Pfam PF05164 Cell division protein ZapA 7 78 1.9E-13 T 23-10-2018 IPR007838 Cell division protein ZapA-like CDG60_05960 a773111c315987e35658c270ff8b7c81 94 SUPERFAMILY SSF102829 7 89 1.44E-14 T 23-10-2018 IPR036192 Cell division protein ZapA-like superfamily CDG60_17130 881b9104cfbe57c00273b007da0105eb 223 Pfam PF03070 TENA/THI-4/PQQC family 22 214 7.8E-38 T 23-10-2018 IPR004305 Thiaminase-2/PQQC CDG60_17130 881b9104cfbe57c00273b007da0105eb 223 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 16 214 4.2E-43 T 23-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 CDG60_17130 881b9104cfbe57c00273b007da0105eb 223 Gene3D G3DSA:1.20.910.10 1 221 8.4E-67 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_17130 881b9104cfbe57c00273b007da0105eb 223 SUPERFAMILY SSF48613 1 213 1.93E-66 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_04035 1903598b5ff81fe6e3cff23a4969d6ea 428 PIRSF PIRSF001563 5 428 5.5E-108 T 23-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CDG60_04035 1903598b5ff81fe6e3cff23a4969d6ea 428 SUPERFAMILY SSF53623 12 287 2.52E-84 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_04035 1903598b5ff81fe6e3cff23a4969d6ea 428 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 423 1.5E-102 T 23-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CDG60_04035 1903598b5ff81fe6e3cff23a4969d6ea 428 Gene3D G3DSA:3.90.190.20 291 427 9.9E-27 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_04035 1903598b5ff81fe6e3cff23a4969d6ea 428 Pfam PF08245 Mur ligase middle domain 53 205 2.4E-14 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG60_04035 1903598b5ff81fe6e3cff23a4969d6ea 428 Gene3D G3DSA:3.40.1190.10 2 289 3.1E-90 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_04035 1903598b5ff81fe6e3cff23a4969d6ea 428 SUPERFAMILY SSF53244 291 425 6.26E-25 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_14610 ac6c348df408390d284249644f2f174a 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 1.1E-134 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 23-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 SUPERFAMILY SSF51569 6 335 1.11E-136 T 23-10-2018 CDG60_14610 ac6c348df408390d284249644f2f174a 337 SMART SM01004 10 333 9.9E-229 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 3.9E-57 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 3.9E-57 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 3.9E-57 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 3.9E-57 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 3.9E-57 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 3.9E-57 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_14610 ac6c348df408390d284249644f2f174a 337 Gene3D G3DSA:3.20.20.70 2 337 4.3E-144 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_14610 ac6c348df408390d284249644f2f174a 337 PIRSF PIRSF001415 2 336 2.4E-142 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG60_17805 5edbb8a08718679440814bceb8d23523 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.4E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_17805 5edbb8a08718679440814bceb8d23523 302 SUPERFAMILY SSF53850 92 297 2.57E-31 T 23-10-2018 CDG60_17805 5edbb8a08718679440814bceb8d23523 302 Gene3D G3DSA:1.10.10.10 3 90 2.0E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_17805 5edbb8a08718679440814bceb8d23523 302 Gene3D G3DSA:3.40.190.290 94 300 2.2E-32 T 23-10-2018 CDG60_17805 5edbb8a08718679440814bceb8d23523 302 SUPERFAMILY SSF46785 1 112 9.53E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_17805 5edbb8a08718679440814bceb8d23523 302 Pfam PF03466 LysR substrate binding domain 92 294 2.8E-30 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 Gene3D G3DSA:3.10.290.10 34 106 1.2E-15 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 Pfam PF00849 RNA pseudouridylate synthase 123 272 1.9E-30 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 48 344 1.8E-90 T 23-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 Gene3D G3DSA:3.30.2350.10 115 347 1.9E-68 T 23-10-2018 CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 SUPERFAMILY SSF55120 110 344 2.47E-74 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 SUPERFAMILY SSF55174 47 136 6.56E-9 T 23-10-2018 CDG60_05470 ddc2c3f049fe35273448720ea3d73614 350 Pfam PF01479 S4 domain 63 93 1.7E-5 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_12660 27bf7b52dd18a36cb3be40af9f86d97c 199 Gene3D G3DSA:3.40.50.10420 10 199 9.8E-48 T 23-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDG60_12660 27bf7b52dd18a36cb3be40af9f86d97c 199 PIRSF PIRSF006806 8 193 7.9E-35 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDG60_12660 27bf7b52dd18a36cb3be40af9f86d97c 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 191 9.4E-36 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDG60_12660 27bf7b52dd18a36cb3be40af9f86d97c 199 SUPERFAMILY SSF100950 11 197 1.81E-43 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_12660 27bf7b52dd18a36cb3be40af9f86d97c 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 191 1.8E-42 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 SUPERFAMILY SSF142984 254 337 5.1E-21 T 23-10-2018 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 429 2.3E-179 T 23-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 SMART SM00928 342 387 6.9E-21 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 Gene3D G3DSA:3.40.50.11540 64 241 6.6E-78 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 344 427 7.7E-25 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 Pfam PF10531 SLBB domain 259 304 4.9E-7 T 23-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 SUPERFAMILY SSF142019 29 247 1.83E-84 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 59 230 4.4E-49 T 23-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 Gene3D G3DSA:1.20.1440.230 340 441 4.5E-26 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 Gene3D G3DSA:3.10.20.600 245 339 1.1E-28 T 23-10-2018 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 SUPERFAMILY SSF140490 339 431 1.83E-30 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 355 366 - T 23-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13860 41ee5b79e663435ced290e69a24423a2 443 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 178 193 - T 23-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_03290 3a30c7b28ddc42811914c1db56e76708 83 Gene3D G3DSA:3.30.70.330 1 83 2.2E-25 T 23-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDG60_03290 3a30c7b28ddc42811914c1db56e76708 83 SMART SM00360 2 75 4.5E-25 T 23-10-2018 IPR000504 RNA recognition motif domain GO:0003676 CDG60_03290 3a30c7b28ddc42811914c1db56e76708 83 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 6.2E-22 T 23-10-2018 IPR000504 RNA recognition motif domain GO:0003676 CDG60_03290 3a30c7b28ddc42811914c1db56e76708 83 SUPERFAMILY SSF54928 2 81 8.6E-26 T 23-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 CDG60_14650 48b88b1ef0dcb5b13160f3d00d32a191 76 SUPERFAMILY SSF89447 3 65 2.09E-12 T 23-10-2018 IPR037914 SpoVT-AbrB domain superfamily CDG60_14650 48b88b1ef0dcb5b13160f3d00d32a191 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 43 1.1E-11 T 23-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CDG60_14650 48b88b1ef0dcb5b13160f3d00d32a191 76 SMART SM00966 7 45 5.4E-4 T 23-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CDG60_14650 48b88b1ef0dcb5b13160f3d00d32a191 76 Gene3D G3DSA:2.10.260.10 1 76 5.4E-30 T 23-10-2018 CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 Pfam PF00687 Ribosomal protein L1p/L10e family 36 220 5.0E-49 T 23-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 SUPERFAMILY SSF56808 6 225 3.79E-77 T 23-10-2018 IPR023674 Ribosomal protein L1-like CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 Gene3D G3DSA:3.30.190.20 25 221 2.1E-75 T 23-10-2018 CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 PIRSF PIRSF002155 1 227 1.4E-71 T 23-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.287 T 23-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 Gene3D G3DSA:3.40.50.790 68 159 2.1E-75 T 23-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_02245 c196f1890eb843cf4ab92aa37807f415 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.3E-97 T 23-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 Pfam PF00664 ABC transporter transmembrane region 21 297 8.8E-23 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 Gene3D G3DSA:3.40.50.300 341 588 8.8E-80 T 23-10-2018 CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 Gene3D G3DSA:1.20.1560.10 6 329 2.7E-46 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 SMART SM00382 371 569 3.7E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 SUPERFAMILY SSF52540 339 575 1.27E-75 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 Pfam PF00005 ABC transporter 362 507 3.9E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_02410 7cd5b78d70bb2621ff0e76d2a6979928 600 SUPERFAMILY SSF90123 9 333 2.09E-49 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_06680 4789de8225379800fa9e9891d76d9635 312 Gene3D G3DSA:3.40.190.10 94 292 4.1E-52 T 23-10-2018 CDG60_06680 4789de8225379800fa9e9891d76d9635 312 Gene3D G3DSA:1.10.10.10 6 92 1.7E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06680 4789de8225379800fa9e9891d76d9635 312 SUPERFAMILY SSF53850 92 298 1.56E-33 T 23-10-2018 CDG60_06680 4789de8225379800fa9e9891d76d9635 312 Gene3D G3DSA:3.40.190.10 166 267 4.1E-52 T 23-10-2018 CDG60_06680 4789de8225379800fa9e9891d76d9635 312 SUPERFAMILY SSF46785 6 89 3.86E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_06680 4789de8225379800fa9e9891d76d9635 312 Pfam PF03466 LysR substrate binding domain 91 295 4.0E-27 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_06680 4789de8225379800fa9e9891d76d9635 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.0E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 SUPERFAMILY SSF54675 7 112 3.53E-31 T 23-10-2018 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 SUPERFAMILY SSF51690 114 279 3.92E-60 T 23-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 279 6.5E-97 T 23-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 Gene3D G3DSA:3.90.1170.20 10 278 2.3E-112 T 23-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 Gene3D G3DSA:3.20.20.70 123 269 2.3E-112 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 112 3.5E-25 T 23-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 278 1.1E-58 T 23-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 CDG60_17775 f96228823deab1569ae8341abe77e5e4 281 PIRSF PIRSF006250 6 281 1.2E-96 T 23-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CDG60_06715 78058aa968eb3c8f061f94cb34a16005 446 SUPERFAMILY SSF109604 25 385 3.77E-63 T 23-10-2018 CDG60_06715 78058aa968eb3c8f061f94cb34a16005 446 Gene3D G3DSA:1.10.3210.10 28 244 3.8E-139 T 23-10-2018 CDG60_06715 78058aa968eb3c8f061f94cb34a16005 446 Gene3D G3DSA:1.10.3410.10 245 356 3.8E-139 T 23-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 CDG60_06715 78058aa968eb3c8f061f94cb34a16005 446 Gene3D G3DSA:1.10.3550.10 114 429 3.8E-139 T 23-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal CDG60_06715 78058aa968eb3c8f061f94cb34a16005 446 SMART SM00471 59 261 4.8E-7 T 23-10-2018 IPR003607 HD/PDEase domain CDG60_06715 78058aa968eb3c8f061f94cb34a16005 446 Pfam PF01966 HD domain 63 135 3.2E-8 T 23-10-2018 IPR006674 HD domain CDG60_06715 78058aa968eb3c8f061f94cb34a16005 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 438 4.7E-94 T 23-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 Pfam PF00557 Metallopeptidase family M24 19 256 2.3E-52 T 23-10-2018 IPR000994 Peptidase M24 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 82 95 1.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 1.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 1.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 1.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 182 200 - T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 Gene3D G3DSA:3.90.230.10 10 274 6.0E-107 T 23-10-2018 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 12 264 9.1E-99 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 SUPERFAMILY SSF55920 10 268 1.06E-89 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like CDG60_12490 367dbb70f9ddde3df76b57219e9b1aee 275 Hamap MF_01974 Methionine aminopeptidase [map]. 10 265 41.148 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG60_06235 54ff2b864282e2f416f2b3df574f8927 219 Gene3D G3DSA:3.30.420.10 13 211 1.3E-44 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_06235 54ff2b864282e2f416f2b3df574f8927 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 14 207 5.6E-84 T 23-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CDG60_06235 54ff2b864282e2f416f2b3df574f8927 219 Pfam PF00929 Exonuclease 23 200 7.5E-30 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_06235 54ff2b864282e2f416f2b3df574f8927 219 SUPERFAMILY SSF53098 12 209 1.63E-50 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_06235 54ff2b864282e2f416f2b3df574f8927 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 90.043 T 23-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CDG60_06235 54ff2b864282e2f416f2b3df574f8927 219 SMART SM00479 21 209 1.2E-17 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SUPERFAMILY SSF81901 169 310 1.31E-45 T 23-10-2018 CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Gene3D G3DSA:1.25.40.10 29 182 1.2E-59 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SUPERFAMILY SSF81901 310 405 9.68E-24 T 23-10-2018 CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 113 145 2.9E-11 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 292 326 3.3E-9 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 75 109 8.6E-11 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 148 181 1.1E-10 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 255 290 1.4E-13 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 220 254 3.9E-13 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 183 217 3.7E-12 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 39 73 1.5E-10 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 363 399 1.4E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Pfam PF08238 Sel1 repeat 327 362 2.5E-9 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 Gene3D G3DSA:1.25.40.10 183 412 9.3E-82 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SUPERFAMILY SSF81901 29 190 4.32E-51 T 23-10-2018 CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 255 290 1.0E-14 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 219 254 1.0E-14 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 291 326 8.9E-11 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 39 74 1.6E-12 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 75 110 1.1E-11 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 327 362 4.8E-10 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 111 146 3.6E-13 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 183 218 2.7E-13 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 363 399 5.0E-8 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06085 c35de4f9830d06ccbf9ce0e2a4686f64 413 SMART SM00671 147 182 4.0E-12 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 SMART SM00345 7 66 2.5E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 Gene3D G3DSA:1.10.10.10 1 66 4.9E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 SUPERFAMILY SSF46785 3 70 4.38E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 Gene3D G3DSA:1.20.120.530 94 229 6.3E-31 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 3.6E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 SMART SM00895 95 223 5.3E-21 T 23-10-2018 IPR011711 GntR, C-terminal CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 Pfam PF07729 FCD domain 96 222 3.8E-24 T 23-10-2018 IPR011711 GntR, C-terminal CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 SUPERFAMILY SSF48008 94 228 3.4E-28 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 4.4E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_06280 d60428d7feb7ea53b54b808ac064c96e 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 4.4E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 Gene3D G3DSA:2.60.260.20 221 296 7.8E-18 T 23-10-2018 CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 SUPERFAMILY SSF49493 225 306 1.19E-15 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 SUPERFAMILY SSF46565 3 101 1.7E-28 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 Gene3D G3DSA:1.10.287.110 1 126 1.6E-28 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 Pfam PF01556 DnaJ C terminal domain 143 296 1.0E-29 T 23-10-2018 IPR002939 Chaperone DnaJ, C-terminal CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 SUPERFAMILY SSF49493 135 220 1.96E-13 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 Gene3D G3DSA:2.60.260.20 135 217 3.8E-20 T 23-10-2018 CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 SMART SM00271 3 60 4.5E-28 T 23-10-2018 IPR001623 DnaJ domain CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 PRINTS PR00625 DnaJ domain signature 40 60 5.0E-19 T 23-10-2018 IPR001623 DnaJ domain CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 PRINTS PR00625 DnaJ domain signature 24 39 5.0E-19 T 23-10-2018 IPR001623 DnaJ domain CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 PRINTS PR00625 DnaJ domain signature 6 24 5.0E-19 T 23-10-2018 IPR001623 DnaJ domain CDG60_02695 763fee0040a4bcf0f8d0310807136bcb 322 Pfam PF00226 DnaJ domain 4 65 2.1E-23 T 23-10-2018 IPR001623 DnaJ domain CDG60_15265 334960323036df42697b37eb47b90bfb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15265 334960323036df42697b37eb47b90bfb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15265 334960323036df42697b37eb47b90bfb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15265 334960323036df42697b37eb47b90bfb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_15265 334960323036df42697b37eb47b90bfb 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 1.8E-86 T 23-10-2018 CDG60_15265 334960323036df42697b37eb47b90bfb 267 PIRSF PIRSF000094 3 263 5.3E-112 T 23-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG60_15265 334960323036df42697b37eb47b90bfb 267 SUPERFAMILY SSF51735 8 257 9.84E-64 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_15265 334960323036df42697b37eb47b90bfb 267 Gene3D G3DSA:3.40.50.720 1 267 6.7E-65 T 23-10-2018 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 306 4.8E-81 T 23-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 SUPERFAMILY SSF55120 95 307 3.36E-57 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 SMART SM00363 22 81 1.8E-9 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 Pfam PF00849 RNA pseudouridylate synthase 104 248 1.0E-29 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 Gene3D G3DSA:3.10.290.10 11 75 5.6E-19 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 Pfam PF01479 S4 domain 22 68 1.1E-10 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 Gene3D G3DSA:3.30.2350.10 95 310 1.1E-67 T 23-10-2018 CDG60_02945 a7971aa33a1ea71d68b264413065bb1f 316 SUPERFAMILY SSF55174 21 72 5.63E-10 T 23-10-2018 CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 13 569 2.8E-263 T 23-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 Pfam PF00437 Type II/IV secretion system protein 193 459 5.2E-89 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 Gene3D G3DSA:3.40.50.300 295 570 1.4E-105 T 23-10-2018 CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 Gene3D G3DSA:3.30.450.90 157 292 7.3E-48 T 23-10-2018 CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 Gene3D G3DSA:3.30.300.160 68 148 5.0E-6 T 23-10-2018 CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 SUPERFAMILY SSF160246 8 146 6.8E-30 T 23-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 151 4.2E-13 T 23-10-2018 IPR007831 General secretory system II, protein E, N-terminal CDG60_02500 544d19e98a9152f28416b0e4935c1caa 570 SUPERFAMILY SSF52540 176 568 7.16E-101 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_03785 08d0f8acec7c9bb4f41e61ba298f8a28 254 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 4 181 1.6E-22 T 23-10-2018 IPR002654 Glycosyl transferase, family 25 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.186 T 23-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 SUPERFAMILY SSF143800 1 67 5.1E-26 T 23-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.0E-32 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 Gene3D G3DSA:2.30.170.50 1 70 6.5E-31 T 23-10-2018 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.2E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.2E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.2E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_07245 fd91070a1c8e6036942b23ada3b8ab79 75 Pfam PF01197 Ribosomal protein L31 1 66 7.6E-30 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Gene3D G3DSA:3.90.1440.10 229 365 2.2E-169 T 23-10-2018 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Gene3D G3DSA:3.40.50.300 22 412 2.2E-169 T 23-10-2018 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Pfam PF02810 SEC-C motif 887 905 2.0E-9 T 23-10-2018 IPR004027 SEC-C motif CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 830 19.681 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 SUPERFAMILY SSF52540 413 616 2.57E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 SUPERFAMILY SSF52540 6 412 1.54E-81 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 PRINTS PR00906 SecA protein signature 410 423 2.3E-69 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 PRINTS PR00906 SecA protein signature 336 358 2.3E-69 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 PRINTS PR00906 SecA protein signature 373 390 2.3E-69 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 PRINTS PR00906 SecA protein signature 63 87 2.3E-69 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 PRINTS PR00906 SecA protein signature 117 127 2.3E-69 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 PRINTS PR00906 SecA protein signature 101 115 2.3E-69 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 PRINTS PR00906 SecA protein signature 170 190 2.3E-69 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 SUPERFAMILY SSF81767 227 365 6.15E-40 T 23-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Gene3D G3DSA:3.40.50.300 414 618 2.6E-85 T 23-10-2018 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Pfam PF01043 SecA preprotein cross-linking domain 232 355 8.4E-36 T 23-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Gene3D G3DSA:1.10.3060.10 619 830 3.3E-73 T 23-10-2018 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 SMART SM00957 6 399 3.4E-288 T 23-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 814 0.0 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 ProSitePatterns PS01312 SecA family signature. 498 513 - T 23-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Pfam PF07516 SecA Wing and Scaffold domain 615 827 1.8E-67 T 23-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 SUPERFAMILY SSF81886 618 895 2.49E-79 T 23-10-2018 IPR036266 SecA, Wing/Scaffold superfamily CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 Pfam PF07517 SecA DEAD-like domain 8 399 2.1E-128 T 23-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CDG60_04060 eaab59ed284989123199719b6a46d5fe 906 SMART SM00958 228 355 9.3E-71 T 23-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CDG60_11220 6e2f5b3c23c5c53adbcc9ad5d2e76d18 276 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 177 250 5.9E-6 T 23-10-2018 IPR012654 Conserved hypothetical protein CHP02391 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 SUPERFAMILY SSF81333 4 78 3.92E-18 T 23-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 23-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.906 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 7.0E-8 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 7.0E-8 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 7.0E-8 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 Gene3D G3DSA:1.20.20.10 1 77 2.4E-27 T 23-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.2E-28 T 23-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDG60_01560 d8713bb2ca90496ac7cab3e472b4df50 81 Pfam PF00137 ATP synthase subunit C 10 72 2.5E-9 T 23-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CDG60_07425 d9d2269e8373e1932e52ecfc97760911 242 Gene3D G3DSA:3.40.50.720 1 242 3.7E-82 T 23-10-2018 CDG60_07425 d9d2269e8373e1932e52ecfc97760911 242 SUPERFAMILY SSF69572 2 240 5.1E-79 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDG60_07425 d9d2269e8373e1932e52ecfc97760911 242 Pfam PF00899 ThiF family 4 239 2.9E-64 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:3.30.2090.10 715 803 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 SUPERFAMILY SSF82693 38 130 1.01E-24 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:3.30.70.1430 566 662 0.0 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.4E-97 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 SUPERFAMILY SSF82714 718 799 1.7E-16 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:1.20.1640.10 512 1016 0.0 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 SUPERFAMILY SSF82714 183 272 3.01E-22 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 SUPERFAMILY SSF82866 802 1021 3.27E-44 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1019 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:1.20.1640.10 8 511 0.0 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 SUPERFAMILY SSF82693 564 663 8.37E-23 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:3.30.70.1430 38 811 0.0 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 SUPERFAMILY SSF82866 296 497 6.28E-50 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 SUPERFAMILY SSF82693 135 329 4.19E-25 T 23-10-2018 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1030 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDG60_00630 dda5fc8838800fd8ec0bb390dd9ddbb0 1033 Gene3D G3DSA:3.30.70.1440 663 859 0.0 T 23-10-2018 CDG60_15085 b4772ade3b6679883693a0e7735509b8 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 4.2E-23 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG60_15085 b4772ade3b6679883693a0e7735509b8 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.4E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG60_15085 b4772ade3b6679883693a0e7735509b8 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.4E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG60_15085 b4772ade3b6679883693a0e7735509b8 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.4E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG60_15085 b4772ade3b6679883693a0e7735509b8 89 SUPERFAMILY SSF55594 1 87 6.54E-24 T 23-10-2018 IPR035895 HPr-like superfamily CDG60_15085 b4772ade3b6679883693a0e7735509b8 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.3E-23 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG60_15085 b4772ade3b6679883693a0e7735509b8 89 Gene3D G3DSA:3.30.1340.10 1 88 6.7E-26 T 23-10-2018 IPR035895 HPr-like superfamily CDG60_02435 bf88116f29814fffb308ba82c3e9ce74 67 Pfam PF07869 Protein of unknown function (DUF1656) 3 58 1.9E-11 T 23-10-2018 IPR012451 Protein of unknown function DUF1656 CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 SUPERFAMILY SSF81464 14 115 1.8E-23 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 Pfam PF06481 COX Aromatic Rich Motif 297 323 1.1E-8 T 23-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 Gene3D G3DSA:2.60.40.420 111 261 1.9E-47 T 23-10-2018 IPR008972 Cupredoxin CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 11 236 2.9E-99 T 23-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 SUPERFAMILY SSF49503 117 252 2.9E-43 T 23-10-2018 IPR008972 Cupredoxin CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 Gene3D G3DSA:1.10.287.90 26 110 6.7E-32 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 144 221 1.2E-6 T 23-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07325 70a6abfa169ed11f1c3e2e667de054f2 348 PIRSF PIRSF000292 1 348 5.6E-125 T 23-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CDG60_17715 bba6e216db2305a7260a62202efd8fda 120 Gene3D G3DSA:3.30.428.10 1 117 1.9E-24 T 23-10-2018 IPR036265 HIT-like superfamily CDG60_17715 bba6e216db2305a7260a62202efd8fda 120 SUPERFAMILY SSF54197 3 116 2.01E-25 T 23-10-2018 IPR036265 HIT-like superfamily CDG60_17715 bba6e216db2305a7260a62202efd8fda 120 Pfam PF01230 HIT domain 24 105 1.1E-11 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 SUPERFAMILY SSF63411 262 523 7.33E-54 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 Pfam PF00675 Insulinase (Peptidase family M16) 63 153 9.0E-8 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 SUPERFAMILY SSF63411 522 770 1.04E-50 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 Gene3D G3DSA:3.30.830.10 260 487 3.5E-56 T 23-10-2018 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 SUPERFAMILY SSF63411 791 977 1.42E-39 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 SMART SM01264 466 715 7.9E-75 T 23-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 Gene3D G3DSA:3.30.830.10 499 949 2.2E-110 T 23-10-2018 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 Pfam PF08367 Peptidase M16C associated 466 715 6.4E-55 T 23-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 SUPERFAMILY SSF63411 20 246 4.83E-42 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 Gene3D G3DSA:3.30.830.10 3 255 4.0E-82 T 23-10-2018 CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 Pfam PF05193 Peptidase M16 inactive domain 208 391 1.3E-9 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG60_08385 2e0efc4b9c4e206f6ea430430f484a11 979 Gene3D G3DSA:3.30.830.10 530 787 2.2E-110 T 23-10-2018 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 331 343 - T 23-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 Gene3D G3DSA:3.40.50.620 6 208 1.6E-73 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 SUPERFAMILY SSF52425 4 191 3.79E-45 T 23-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 Pfam PF03441 FAD binding domain of DNA photolyase 281 473 6.2E-83 T 23-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 PRINTS PR00147 DNA photolyase signature 351 369 1.1E-21 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 PRINTS PR00147 DNA photolyase signature 390 404 1.1E-21 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 PRINTS PR00147 DNA photolyase signature 331 347 1.1E-21 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 Gene3D G3DSA:1.25.40.80 135 291 1.6E-73 T 23-10-2018 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 Gene3D G3DSA:1.10.579.10 299 476 1.2E-80 T 23-10-2018 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 SUPERFAMILY SSF48173 195 473 1.03E-107 T 23-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 CDG60_11840 357a1cc4a7a9bdc541aa55bfe7da5790 476 Pfam PF00875 DNA photolyase 5 169 2.0E-37 T 23-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 Gene3D G3DSA:3.50.50.60 13 404 2.3E-148 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 Gene3D G3DSA:1.20.58.100 425 540 4.3E-42 T 23-10-2018 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 11 520 1.2E-191 T 23-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 Gene3D G3DSA:3.90.700.10 248 358 2.3E-148 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 6.2E-8 T 23-10-2018 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 6.2E-8 T 23-10-2018 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 5.5E-14 T 23-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 SUPERFAMILY SSF46977 426 526 1.44E-31 T 23-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 SUPERFAMILY SSF56425 238 353 4.04E-41 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 SUPERFAMILY SSF51905 4 447 1.55E-67 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 PIRSF PIRSF000171 3 291 1.7E-19 T 23-10-2018 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 PIRSF PIRSF000171 337 546 1.3E-14 T 23-10-2018 CDG60_06905 b533ca9190e4d89ffd9f68b3760f5cf4 553 Pfam PF00890 FAD binding domain 13 392 1.6E-90 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_03075 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF46689 8 110 4.12E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_03075 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Gene3D G3DSA:3.30.420.10 124 321 2.0E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_03075 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Pfam PF13384 Homeodomain-like domain 3 51 8.3E-10 T 23-10-2018 CDG60_03075 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF53098 129 286 6.98E-18 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_00605 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF46689 8 110 4.12E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_00605 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Gene3D G3DSA:3.30.420.10 124 321 2.0E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_00605 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Pfam PF13384 Homeodomain-like domain 3 51 8.3E-10 T 23-10-2018 CDG60_00605 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF53098 129 286 6.98E-18 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_00525 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF46689 8 110 4.12E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_00525 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Gene3D G3DSA:3.30.420.10 124 321 2.0E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_00525 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Pfam PF13384 Homeodomain-like domain 3 51 8.3E-10 T 23-10-2018 CDG60_00525 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF53098 129 286 6.98E-18 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_17545 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF46689 8 110 4.12E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17545 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Gene3D G3DSA:3.30.420.10 124 321 2.0E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_17545 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Pfam PF13384 Homeodomain-like domain 3 51 8.3E-10 T 23-10-2018 CDG60_17545 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF53098 129 286 6.98E-18 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_00030 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF46689 8 110 4.12E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_00030 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Gene3D G3DSA:3.30.420.10 124 321 2.0E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_00030 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 Pfam PF13384 Homeodomain-like domain 3 51 8.3E-10 T 23-10-2018 CDG60_00030 8e49e3ebbe22a45f1dabef4dd9e0fe5b 441 SUPERFAMILY SSF53098 129 286 6.98E-18 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 Pfam PF09278 MerR, DNA binding 45 107 2.9E-17 T 23-10-2018 IPR015358 Transcription regulator MerR, DNA binding CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 Gene3D G3DSA:1.10.1660.10 1 137 5.1E-36 T 23-10-2018 CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 SMART SM00422 1 70 1.2E-30 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 SUPERFAMILY SSF46955 1 125 1.39E-36 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 Pfam PF00376 MerR family regulatory protein 2 39 2.4E-16 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.2E-48 T 23-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.1E-10 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.1E-10 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_14200 5243f63394958dd6640e12c0ee2cd43a 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.1E-10 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Gene3D G3DSA:3.30.1050.10 886 999 3.3E-16 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Pfam PF02036 SCP-2 sterol transfer family 637 723 5.1E-12 T 23-10-2018 IPR003033 SCP2 sterol-binding domain CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Pfam PF02036 SCP-2 sterol transfer family 777 863 4.1E-13 T 23-10-2018 IPR003033 SCP2 sterol-binding domain CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Pfam PF02036 SCP-2 sterol transfer family 920 996 2.5E-13 T 23-10-2018 IPR003033 SCP2 sterol-binding domain CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.8E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.8E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.8E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 5.8E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 5.8E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 SUPERFAMILY SSF55718 901 996 4.88E-14 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 6.8E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.8E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 6.8E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Gene3D G3DSA:3.10.129.10 316 605 1.3E-89 T 23-10-2018 CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Pfam PF00106 short chain dehydrogenase 10 194 8.5E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 202 6.1E-5 T 23-10-2018 CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 SUPERFAMILY SSF54637 473 590 2.5E-30 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Pfam PF01575 MaoC like domain 472 587 4.4E-30 T 23-10-2018 IPR002539 MaoC-like dehydratase domain CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Gene3D G3DSA:3.40.50.720 1 248 5.7E-66 T 23-10-2018 CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Gene3D G3DSA:3.30.1050.10 615 731 2.8E-20 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Gene3D G3DSA:3.30.1050.10 755 874 1.7E-18 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 SUPERFAMILY SSF54637 321 468 9.32E-38 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 SUPERFAMILY SSF55718 761 863 7.3E-17 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 SUPERFAMILY SSF55718 624 723 2.75E-16 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 SUPERFAMILY SSF51735 4 270 7.65E-60 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_09235 2af30ca73d17431a82b70d38f80ae33f 1000 Gene3D G3DSA:3.30.160.260 249 300 5.7E-13 T 23-10-2018 CDG60_11255 f27ed86b456157c1a8445ec9cf275d97 285 Pfam PF00588 SpoU rRNA Methylase family 17 168 1.3E-33 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG60_11255 f27ed86b456157c1a8445ec9cf275d97 285 Gene3D G3DSA:1.10.8.590 191 278 1.2E-20 T 23-10-2018 CDG60_11255 f27ed86b456157c1a8445ec9cf275d97 285 PIRSF PIRSF004808 12 268 6.8E-66 T 23-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CDG60_11255 f27ed86b456157c1a8445ec9cf275d97 285 SUPERFAMILY SSF75217 14 174 2.94E-36 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_11255 f27ed86b456157c1a8445ec9cf275d97 285 Gene3D G3DSA:3.40.1280.10 13 178 2.6E-61 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_11255 f27ed86b456157c1a8445ec9cf275d97 285 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 15 264 5.7E-67 T 23-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CDG60_13000 717e5477af02c0b3b5081845cbcb796d 233 Gene3D G3DSA:3.30.1370.110 97 226 1.1E-32 T 23-10-2018 CDG60_13000 717e5477af02c0b3b5081845cbcb796d 233 Pfam PF01713 Smr domain 145 221 5.3E-20 T 23-10-2018 IPR002625 Smr domain CDG60_13000 717e5477af02c0b3b5081845cbcb796d 233 SMART SM00463 140 221 8.9E-11 T 23-10-2018 IPR002625 Smr domain CDG60_13000 717e5477af02c0b3b5081845cbcb796d 233 SUPERFAMILY SSF160443 145 221 1.44E-13 T 23-10-2018 IPR036063 Smr domain superfamily CDG60_12930 825e22dde8a723d759523a04453be7ec 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 7.1E-210 T 23-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CDG60_12930 825e22dde8a723d759523a04453be7ec 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG60_12930 825e22dde8a723d759523a04453be7ec 483 Pfam PF00171 Aldehyde dehydrogenase family 20 477 8.7E-174 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_12930 825e22dde8a723d759523a04453be7ec 483 Gene3D G3DSA:3.40.605.10 20 474 6.7E-186 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_12930 825e22dde8a723d759523a04453be7ec 483 Gene3D G3DSA:3.40.309.10 262 451 6.7E-186 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_12930 825e22dde8a723d759523a04453be7ec 483 SUPERFAMILY SSF53720 9 482 4.19E-172 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_12930 825e22dde8a723d759523a04453be7ec 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG60_10020 f58602590c3b2333c689f5f0cfbd7e0c 137 Pfam PF01230 HIT domain 14 109 9.8E-26 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG60_10020 f58602590c3b2333c689f5f0cfbd7e0c 137 Gene3D G3DSA:3.30.428.10 1 137 2.3E-37 T 23-10-2018 IPR036265 HIT-like superfamily CDG60_10020 f58602590c3b2333c689f5f0cfbd7e0c 137 PRINTS PR00332 Histidine triad family signature 29 47 5.7E-18 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG60_10020 f58602590c3b2333c689f5f0cfbd7e0c 137 PRINTS PR00332 Histidine triad family signature 96 106 5.7E-18 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG60_10020 f58602590c3b2333c689f5f0cfbd7e0c 137 PRINTS PR00332 Histidine triad family signature 8 24 5.7E-18 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG60_10020 f58602590c3b2333c689f5f0cfbd7e0c 137 SUPERFAMILY SSF54197 1 137 9.74E-38 T 23-10-2018 IPR036265 HIT-like superfamily CDG60_14980 10eaa485a346323e4fe67dadb84a7381 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 47.687 T 23-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CDG60_14980 10eaa485a346323e4fe67dadb84a7381 326 SUPERFAMILY SSF55681 91 325 1.65E-81 T 23-10-2018 CDG60_14980 10eaa485a346323e4fe67dadb84a7381 326 Gene3D G3DSA:3.30.930.10 6 326 1.6E-123 T 23-10-2018 CDG60_14980 10eaa485a346323e4fe67dadb84a7381 326 SUPERFAMILY SSF46589 11 98 3.66E-20 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDG60_14980 10eaa485a346323e4fe67dadb84a7381 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 86 1.5E-20 T 23-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDG60_14980 10eaa485a346323e4fe67dadb84a7381 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 5.2E-105 T 23-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CDG60_14980 10eaa485a346323e4fe67dadb84a7381 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 325 1.1E-110 T 23-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDG60_10440 d454188f67311ba3882601c20a01be29 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 136 2.7E-40 T 23-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CDG60_10440 d454188f67311ba3882601c20a01be29 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 131 2.7E-36 T 23-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CDG60_10440 d454188f67311ba3882601c20a01be29 158 SUPERFAMILY SSF52540 27 125 1.92E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10440 d454188f67311ba3882601c20a01be29 158 Gene3D G3DSA:3.40.50.300 3 154 8.2E-40 T 23-10-2018 CDG60_03020 884e1095f0432c9f1ce931f2f7997390 300 SUPERFAMILY SSF103481 46 144 5.36E-8 T 23-10-2018 CDG60_03020 884e1095f0432c9f1ce931f2f7997390 300 SUPERFAMILY SSF103481 192 295 4.45E-14 T 23-10-2018 CDG60_03020 884e1095f0432c9f1ce931f2f7997390 300 Pfam PF00892 EamA-like transporter family 153 289 2.5E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_03020 884e1095f0432c9f1ce931f2f7997390 300 Pfam PF00892 EamA-like transporter family 15 142 3.0E-10 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 Pfam PF10502 Signal peptidase, peptidase S26 217 256 1.4E-5 T 23-10-2018 IPR019533 Peptidase S26 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 257 4.5E-48 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 Gene3D G3DSA:2.170.230.10 136 218 2.6E-69 T 23-10-2018 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 SUPERFAMILY SSF51306 59 262 8.63E-66 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 Pfam PF00717 Peptidase S24-like 68 149 8.0E-21 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 Gene3D G3DSA:2.10.109.10 59 258 2.6E-69 T 23-10-2018 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 2.5E-24 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 137 2.5E-24 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 219 238 2.5E-24 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 ProSitePatterns PS00760 Signal peptidases I lysine active site. 127 139 - T 23-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CDG60_06925 66b5ac94daa85517062bce8ee20db10b 275 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 23-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 SUPERFAMILY SSF47323 678 873 2.43E-24 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Pfam PF08264 Anticodon-binding domain of tRNA 717 835 2.8E-11 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 634 674 5.5E-7 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 431 587 7.5E-8 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 873 0.0 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Gene3D G3DSA:3.10.330.110 582 644 0.0 T 23-10-2018 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Gene3D G3DSA:1.10.730.10 13 805 0.0 T 23-10-2018 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 873 22.803 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 SUPERFAMILY SSF50677 231 425 3.56E-51 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Pfam PF09334 tRNA synthetases class I (M) 40 176 3.3E-19 T 23-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 417 7.4E-73 T 23-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Gene3D G3DSA:3.40.50.620 37 581 0.0 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 SUPERFAMILY SSF52374 9 684 5.63E-144 T 23-10-2018 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Gene3D G3DSA:3.90.740.10 232 427 0.0 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 1.9E-48 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 1.9E-48 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 500 518 1.9E-48 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 1.9E-48 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 1.9E-48 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 539 561 1.9E-48 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 572 582 1.9E-48 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG60_15230 9da5dec16fd513e7bbc912259b9457e4 873 Gene3D G3DSA:3.10.20.590 814 873 1.6E-19 T 23-10-2018 CDG60_01065 e1c7deadeb7f5d4ad41017baa19f2c23 367 Gene3D G3DSA:3.30.1950.10 82 166 1.3E-78 T 23-10-2018 CDG60_01065 e1c7deadeb7f5d4ad41017baa19f2c23 367 Pfam PF02563 Polysaccharide biosynthesis/export protein 75 162 1.4E-21 T 23-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CDG60_01065 e1c7deadeb7f5d4ad41017baa19f2c23 367 Gene3D G3DSA:3.10.560.10 60 252 1.3E-78 T 23-10-2018 CDG60_01065 e1c7deadeb7f5d4ad41017baa19f2c23 367 Gene3D G3DSA:3.10.560.10 49 337 1.3E-78 T 23-10-2018 CDG60_13835 f3fcb1b24eae19147883bc441908e8b8 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 1.1E-21 T 23-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDG60_13835 f3fcb1b24eae19147883bc441908e8b8 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 17.961 T 23-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 719 764 7.2E-4 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 648 692 3.9E-11 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 916 960 1.7E-9 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 1035 1079 9.2E-11 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 847 891 2.0E-13 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 795 839 2.5E-14 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 986 1030 5.6E-13 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SMART SM00257 585 629 4.6E-6 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 584 628 2.09E-8 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 986 1030 1.44E-7 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 1034 1079 1.96E-8 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01464 Transglycosylase SLT domain 138 240 1.1E-24 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 717 765 2.35E-5 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 151 179 - T 23-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 707 780 2.1E-7 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 844 902 3.0E-13 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 971 1033 3.1E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 1034 1081 2.4E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 575 637 7.9E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 903 970 2.0E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 638 706 7.1E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:3.10.350.10 781 843 8.3E-15 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 847 890 6.02E-9 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 649 691 1.8E-9 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 720 764 1.1E-5 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 987 1030 5.0E-10 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 848 890 3.8E-11 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 796 839 2.9E-12 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 1036 1079 1.7E-11 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 586 626 4.1E-9 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Pfam PF01476 LysM domain 917 958 2.0E-10 T 23-10-2018 IPR018392 LysM domain CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 916 958 8.37E-8 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF53955 130 289 4.61E-43 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 794 839 2.49E-9 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 Gene3D G3DSA:1.10.530.10 128 276 4.2E-31 T 23-10-2018 CDG60_06050 b4eda2a2fa8cac4c59b226f64a68c7ae 1081 SUPERFAMILY SSF54106 648 691 1.44E-7 T 23-10-2018 CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 Pfam PF00691 OmpA family 381 476 2.5E-25 T 23-10-2018 IPR006665 OmpA-like domain CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 SUPERFAMILY SSF103088 374 480 3.66E-36 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 465 483 6.7E-9 T 23-10-2018 CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 427 444 6.7E-9 T 23-10-2018 CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 445 464 6.7E-9 T 23-10-2018 CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 PRINTS PR01021 OMPA domain signature 427 443 4.2E-11 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 PRINTS PR01021 OMPA domain signature 382 404 4.2E-11 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 PRINTS PR01021 OMPA domain signature 412 427 4.2E-11 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_06425 2a9fc0ef7fe027fd2549f721ed5f88cb 483 Gene3D G3DSA:3.30.1330.60 346 482 1.5E-41 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_13080 23c2596846cad14d99c19397c2a18b4d 76 Pfam PF00550 Phosphopantetheine attachment site 9 73 7.1E-14 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain CDG60_13080 23c2596846cad14d99c19397c2a18b4d 76 SUPERFAMILY SSF47336 8 76 1.31E-14 T 23-10-2018 IPR036736 ACP-like superfamily CDG60_13080 23c2596846cad14d99c19397c2a18b4d 76 Gene3D G3DSA:1.10.1200.10 1 76 1.4E-25 T 23-10-2018 IPR036736 ACP-like superfamily CDG60_04985 98ba8649ef93f2dd0e970e36fffcaf69 61 SUPERFAMILY SSF57829 2 54 1.22E-17 T 23-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CDG60_04985 98ba8649ef93f2dd0e970e36fffcaf69 61 Pfam PF01783 Ribosomal L32p protein family 2 55 2.7E-20 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_04985 98ba8649ef93f2dd0e970e36fffcaf69 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.561 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_04985 98ba8649ef93f2dd0e970e36fffcaf69 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 5.0E-20 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 Pfam PF04963 Sigma-54 factor, core binding domain 111 310 1.2E-53 T 23-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 Pfam PF04552 Sigma-54, DNA binding domain 324 481 7.3E-68 T 23-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDG60_14825 2dec1e45311a3811adcab772c1589400 484 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 48 6.8E-14 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 462 469 - T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 PIRSF PIRSF000774 1 483 1.5E-142 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 Gene3D G3DSA:1.10.10.1330 117 262 1.5E-20 T 23-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CDG60_14825 2dec1e45311a3811adcab772c1589400 484 PRINTS PR00045 Sigma-54 factor signature 194 211 3.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 PRINTS PR00045 Sigma-54 factor signature 383 395 3.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 PRINTS PR00045 Sigma-54 factor signature 457 475 3.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 PRINTS PR00045 Sigma-54 factor signature 399 410 3.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 371 390 - T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 481 2.7E-154 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG60_14825 2dec1e45311a3811adcab772c1589400 484 Gene3D G3DSA:1.10.10.60 424 482 8.2E-24 T 23-10-2018 CDG60_11125 119179ba67aeb039cf76807b0efccb23 332 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 30 290 1.4E-27 T 23-10-2018 IPR018713 Domain of unknown function DUF2236 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 SUPERFAMILY SSF50022 13 159 1.07E-49 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 Pfam PF00355 Rieske [2Fe-2S] domain 43 126 1.4E-21 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 Gene3D G3DSA:3.90.380.10 18 434 1.3E-152 T 23-10-2018 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 SUPERFAMILY SSF55961 162 445 8.63E-63 T 23-10-2018 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 Gene3D G3DSA:2.102.10.10 43 172 1.3E-152 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 9.4E-60 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 9.4E-60 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 9.4E-60 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 185 207 9.4E-60 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 9.4E-60 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 9.4E-60 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_02990 97c7f832a76120e827b43eb02dc57457 455 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 171 434 7.8E-43 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 Pfam PF00072 Response regulator receiver domain 23 133 2.2E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 Gene3D G3DSA:1.10.10.10 146 254 2.1E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 SMART SM00448 21 132 2.1E-43 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 172 248 1.3E-21 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 Gene3D G3DSA:3.40.50.2300 6 141 1.5E-40 T 23-10-2018 CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 SUPERFAMILY SSF46894 150 250 8.5E-27 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 SMART SM00862 172 248 7.8E-23 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_16910 c5c00fca8c49497012bc325f886686bd 254 SUPERFAMILY SSF52172 22 143 8.4E-42 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_00670 e6a78254f5e0314ab941f419b6d945e4 321 Gene3D G3DSA:3.30.460.10 23 165 5.6E-8 T 23-10-2018 CDG60_00670 e6a78254f5e0314ab941f419b6d945e4 321 SUPERFAMILY SSF81301 2 169 3.27E-26 T 23-10-2018 CDG60_00670 e6a78254f5e0314ab941f419b6d945e4 321 Gene3D G3DSA:1.10.1410.10 166 316 3.3E-9 T 23-10-2018 CDG60_00670 e6a78254f5e0314ab941f419b6d945e4 321 SUPERFAMILY SSF81631 175 295 1.33E-7 T 23-10-2018 CDG60_15080 dc6449a47e7b3bb899d5748e66daa0af 179 PIRSF PIRSF016183 3 177 4.1E-42 T 23-10-2018 IPR006839 Ribosome-associated, YjgA CDG60_15080 dc6449a47e7b3bb899d5748e66daa0af 179 SUPERFAMILY SSF158710 30 173 1.23E-35 T 23-10-2018 IPR023153 PSPTO4464-like domain superfamily CDG60_15080 dc6449a47e7b3bb899d5748e66daa0af 179 Gene3D G3DSA:1.10.60.30 102 174 6.6E-8 T 23-10-2018 CDG60_15080 dc6449a47e7b3bb899d5748e66daa0af 179 Pfam PF04751 Protein of unknown function (DUF615) 19 168 2.6E-33 T 23-10-2018 IPR006839 Ribosome-associated, YjgA CDG60_15080 dc6449a47e7b3bb899d5748e66daa0af 179 Gene3D G3DSA:1.10.60.30 29 101 3.9E-19 T 23-10-2018 CDG60_05325 342af8ace430f397edb7477648f3a24d 394 SUPERFAMILY SSF56796 5 394 6.54E-110 T 23-10-2018 CDG60_05325 342af8ace430f397edb7477648f3a24d 394 Gene3D G3DSA:1.20.1090.10 190 394 8.1E-56 T 23-10-2018 CDG60_05325 342af8ace430f397edb7477648f3a24d 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG60_05325 342af8ace430f397edb7477648f3a24d 394 Gene3D G3DSA:3.40.50.1970 1 188 1.1E-58 T 23-10-2018 CDG60_05325 342af8ace430f397edb7477648f3a24d 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 386 5.9E-109 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG60_05325 342af8ace430f397edb7477648f3a24d 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 SUPERFAMILY SSF55257 6 231 3.53E-31 T 23-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 Gene3D G3DSA:1.10.150.20 243 327 2.4E-37 T 23-10-2018 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.686 T 23-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 SUPERFAMILY SSF47789 249 322 6.54E-26 T 23-10-2018 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 SMART SM00662 23 232 2.5E-87 T 23-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 Gene3D G3DSA:3.30.1360.10 17 225 1.8E-79 T 23-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 306 4.8E-24 T 23-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 Gene3D G3DSA:2.170.120.12 53 175 1.8E-79 T 23-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 1.3E-20 T 23-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 1.6E-23 T 23-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 1.7E-105 T 23-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 SUPERFAMILY SSF56553 53 176 4.71E-36 T 23-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_15865 29e2a1ad862e826eb3ce0138ff8ee99f 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-35 T 23-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_01105 c113dc4ec47a5c6279dd72dc66ae01ef 375 Gene3D G3DSA:3.40.50.2000 20 183 6.6E-26 T 23-10-2018 CDG60_01105 c113dc4ec47a5c6279dd72dc66ae01ef 375 SUPERFAMILY SSF53756 20 343 1.1E-32 T 23-10-2018 CDG60_01105 c113dc4ec47a5c6279dd72dc66ae01ef 375 Gene3D G3DSA:3.40.50.2000 184 344 6.6E-26 T 23-10-2018 CDG60_01105 c113dc4ec47a5c6279dd72dc66ae01ef 375 Pfam PF00534 Glycosyl transferases group 1 202 344 3.3E-15 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Gene3D G3DSA:1.10.1030.10 404 553 7.1E-46 T 23-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SUPERFAMILY SSF52335 946 1073 2.62E-43 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Pfam PF02142 MGS-like domain 962 1047 1.0E-21 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Gene3D G3DSA:3.30.470.20 665 935 3.1E-120 T 23-10-2018 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SUPERFAMILY SSF52440 557 675 1.58E-49 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.7E-37 T 23-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Gene3D G3DSA:3.40.50.1380 945 1076 6.8E-40 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SUPERFAMILY SSF48108 396 554 5.23E-52 T 23-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SUPERFAMILY SSF52440 2 127 3.45E-49 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.127 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Gene3D G3DSA:3.40.50.20 554 662 1.5E-48 T 23-10-2018 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SUPERFAMILY SSF56059 673 933 2.83E-104 T 23-10-2018 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Gene3D G3DSA:3.30.470.20 119 403 4.8E-129 T 23-10-2018 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SMART SM00851 961 1047 2.9E-35 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SUPERFAMILY SSF56059 128 401 8.49E-109 T 23-10-2018 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.484 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 SMART SM01096 424 547 1.3E-69 T 23-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.0E-65 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.0E-65 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.0E-65 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.0E-65 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.0E-65 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.0E-65 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.0E-65 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.5E-36 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-72 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1059 0.0 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05740 3bc848c081e68ffdf806b8d12a78fdf7 1077 Gene3D G3DSA:3.40.50.20 1 116 2.6E-50 T 23-10-2018 CDG60_12615 864d4a7f90d456ea8badff249e7274a6 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 6.8E-58 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CDG60_12615 864d4a7f90d456ea8badff249e7274a6 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 164 5.9E-56 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CDG60_12615 864d4a7f90d456ea8badff249e7274a6 169 PIRSF PIRSF028301 2 169 2.0E-61 T 23-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 Gene3D G3DSA:3.30.420.40 1 186 1.5E-60 T 23-10-2018 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 TIGRFAM TIGR00016 ackA: acetate kinase 3 384 8.0E-127 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 PIRSF PIRSF000722 1 391 3.0E-127 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 Gene3D G3DSA:3.30.420.40 189 399 1.3E-68 T 23-10-2018 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 PRINTS PR00471 Acetate kinase family signature 368 380 2.4E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 PRINTS PR00471 Acetate kinase family signature 5 16 2.4E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 PRINTS PR00471 Acetate kinase family signature 291 304 2.4E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 PRINTS PR00471 Acetate kinase family signature 165 178 2.4E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 PRINTS PR00471 Acetate kinase family signature 194 215 2.4E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 PRINTS PR00471 Acetate kinase family signature 313 329 2.4E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 SUPERFAMILY SSF53067 149 386 1.73E-76 T 23-10-2018 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 23-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 SUPERFAMILY SSF53067 4 186 9.07E-58 T 23-10-2018 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 Hamap MF_00020 Acetate kinase [ackA]. 1 390 156.605 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15550 60a7a54f225f4d0558560322fc62693c 406 Pfam PF00871 Acetokinase family 5 381 7.8E-124 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG60_15725 96bbda81ab068f7cec4b6ea95ba06ca5 152 Gene3D G3DSA:2.40.128.270 34 149 1.2E-25 T 23-10-2018 IPR038670 HslJ-like superfamily CDG60_15725 96bbda81ab068f7cec4b6ea95ba06ca5 152 Pfam PF03724 META domain 38 146 4.9E-26 T 23-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Gene3D G3DSA:2.40.50.100 229 307 6.1E-20 T 23-10-2018 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 432 657 2.2E-67 T 23-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 141 170 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Pfam PF00364 Biotin-requiring enzyme 2 71 6.0E-18 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Pfam PF00364 Biotin-requiring enzyme 120 189 7.4E-16 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Pfam PF00364 Biotin-requiring enzyme 231 301 3.4E-17 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Gene3D G3DSA:4.10.320.10 349 400 3.1E-15 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 252 281 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 SUPERFAMILY SSF51230 118 208 3.14E-20 T 23-10-2018 IPR011053 Single hybrid motif CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Gene3D G3DSA:3.30.559.10 418 658 2.7E-75 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 SUPERFAMILY SSF51230 2 91 3.53E-21 T 23-10-2018 IPR011053 Single hybrid motif CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 SUPERFAMILY SSF47005 353 398 3.53E-10 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Pfam PF02817 e3 binding domain 359 393 2.5E-11 T 23-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Gene3D G3DSA:2.40.50.100 1 78 3.0E-19 T 23-10-2018 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 Gene3D G3DSA:2.40.50.100 119 195 2.3E-17 T 23-10-2018 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 SUPERFAMILY SSF51230 229 320 1.57E-21 T 23-10-2018 IPR011053 Single hybrid motif CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 SUPERFAMILY SSF52777 421 658 8.01E-72 T 23-10-2018 CDG60_17345 ba0f0fb6005d29e60bb660290a15cbde 658 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 23 52 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG60_13070 c37992221fd38be28884561accd67a8d 3607 SMART SM00869 3317 3596 9.1E-34 T 23-10-2018 IPR005546 Autotransporter beta-domain CDG60_13070 c37992221fd38be28884561accd67a8d 3607 SUPERFAMILY SSF103515 3256 3607 1.44E-41 T 23-10-2018 IPR036709 Autotransporter beta-domain superfamily CDG60_13070 c37992221fd38be28884561accd67a8d 3607 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 5.3E-10 T 23-10-2018 IPR024973 ESPR domain CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 Gene3D G3DSA:1.10.10.10 216 288 6.0E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 SUPERFAMILY SSF88659 205 287 6.17E-18 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 Pfam PF04545 Sigma-70, region 4 233 283 3.6E-15 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 Pfam PF04542 Sigma-70 region 2 57 126 2.7E-16 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 286 1.1E-32 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 5 288 52.136 T 23-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 PRINTS PR00046 Major sigma-70 factor signature 256 271 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 PRINTS PR00046 Major sigma-70 factor signature 237 249 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 PRINTS PR00046 Major sigma-70 factor signature 81 94 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 PRINTS PR00046 Major sigma-70 factor signature 271 282 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 Pfam PF00140 Sigma-70 factor, region 1.2 20 44 1.1E-5 T 23-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 Gene3D G3DSA:1.20.120.1810 19 126 2.0E-27 T 23-10-2018 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 SUPERFAMILY SSF88946 19 126 5.63E-40 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_07735 98e793ebcad9ef7625ed6eefb7500752 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 287 2.8E-122 T 23-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_13900 929c28b89c88747f67fea44fc75de0bc 456 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG60_13900 929c28b89c88747f67fea44fc75de0bc 456 Gene3D G3DSA:1.20.1740.10 8 454 7.0E-63 T 23-10-2018 CDG60_13900 929c28b89c88747f67fea44fc75de0bc 456 PIRSF PIRSF006060 2 451 6.3E-78 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_13900 929c28b89c88747f67fea44fc75de0bc 456 Pfam PF00324 Amino acid permease 16 420 1.3E-111 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_02800 d6fd924f6ad2110b21b8e668632d469d 61 SUPERFAMILY SSF57716 3 57 4.85E-19 T 23-10-2018 CDG60_02800 d6fd924f6ad2110b21b8e668632d469d 61 Gene3D G3DSA:3.30.50.10 1 59 2.7E-21 T 23-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 CDG60_02800 d6fd924f6ad2110b21b8e668632d469d 61 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 57 17.7 T 23-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CDG60_02800 d6fd924f6ad2110b21b8e668632d469d 61 Pfam PF03884 DNA gyrase inhibitor YacG 6 52 1.9E-22 T 23-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CDG60_12110 637b6c7c07838fa8e4895f678af84a9e 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 125 3.6E-14 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDG60_12110 637b6c7c07838fa8e4895f678af84a9e 134 SUPERFAMILY SSF54534 48 126 1.7E-14 T 23-10-2018 CDG60_12110 637b6c7c07838fa8e4895f678af84a9e 134 PIRSF PIRSF006092 5 127 1.8E-21 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDG60_12110 637b6c7c07838fa8e4895f678af84a9e 134 Pfam PF14760 Rnk N-terminus 4 43 1.5E-12 T 23-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CDG60_12110 637b6c7c07838fa8e4895f678af84a9e 134 Gene3D G3DSA:1.10.286.20 2 43 3.3E-9 T 23-10-2018 CDG60_12110 637b6c7c07838fa8e4895f678af84a9e 134 Gene3D G3DSA:3.10.50.30 44 134 9.3E-24 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDG60_16855 dc4722de298af973cf4cbb504e8e1509 324 SUPERFAMILY SSF160240 216 288 1.31E-6 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDG60_16855 dc4722de298af973cf4cbb504e8e1509 324 SUPERFAMILY SSF161111 18 213 9.68E-59 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG60_16855 dc4722de298af973cf4cbb504e8e1509 324 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 291 5.5E-89 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG60_16855 dc4722de298af973cf4cbb504e8e1509 324 Gene3D G3DSA:1.20.1510.10 18 212 2.9E-47 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG60_16855 dc4722de298af973cf4cbb504e8e1509 324 Pfam PF01545 Cation efflux family 22 212 4.5E-47 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG60_15450 9154ce21a0d85019cadf2e1757f029c2 274 Pfam PF01066 CDP-alcohol phosphatidyltransferase 47 110 4.0E-14 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG60_15450 9154ce21a0d85019cadf2e1757f029c2 274 Gene3D G3DSA:1.20.120.1760 37 192 7.8E-13 T 23-10-2018 CDG60_15450 9154ce21a0d85019cadf2e1757f029c2 274 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 54 218 2.5E-38 T 23-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CDG60_15450 9154ce21a0d85019cadf2e1757f029c2 274 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 88 110 - T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG60_15280 34314c1332569b0112ba831e6d834f57 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 92 342 5.7E-73 T 23-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CDG60_15280 34314c1332569b0112ba831e6d834f57 352 Gene3D G3DSA:3.40.50.300 117 284 3.3E-44 T 23-10-2018 CDG60_15280 34314c1332569b0112ba831e6d834f57 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 34 349 33.196 T 23-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CDG60_15280 34314c1332569b0112ba831e6d834f57 352 Gene3D G3DSA:2.40.50.140 32 116 5.2E-17 T 23-10-2018 CDG60_15280 34314c1332569b0112ba831e6d834f57 352 Gene3D G3DSA:1.10.40.50 285 352 1.2E-21 T 23-10-2018 CDG60_15280 34314c1332569b0112ba831e6d834f57 352 SUPERFAMILY SSF52540 128 345 4.06E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15280 34314c1332569b0112ba831e6d834f57 352 Pfam PF03193 RsgA GTPase 114 285 8.3E-50 T 23-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CDG60_15250 cb3ebdbbbf09c852d5654a68bb611567 664 SUPERFAMILY SSF52540 12 235 6.77E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15250 cb3ebdbbbf09c852d5654a68bb611567 664 Gene3D G3DSA:3.40.50.300 10 283 8.6E-68 T 23-10-2018 CDG60_15250 cb3ebdbbbf09c852d5654a68bb611567 664 SMART SM00382 41 235 4.9E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_15250 cb3ebdbbbf09c852d5654a68bb611567 664 Pfam PF00005 ABC transporter 32 180 4.3E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_15250 cb3ebdbbbf09c852d5654a68bb611567 664 Pfam PF12704 MacB-like periplasmic core domain 286 504 2.1E-37 T 23-10-2018 IPR025857 MacB-like periplasmic core domain CDG60_15250 cb3ebdbbbf09c852d5654a68bb611567 664 Pfam PF02687 FtsX-like permease family 568 657 9.6E-12 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDG60_15250 cb3ebdbbbf09c852d5654a68bb611567 664 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_17075 da364b090568a8d0a9b05269cc102f4d 207 Gene3D G3DSA:3.40.50.850 2 207 7.8E-60 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_17075 da364b090568a8d0a9b05269cc102f4d 207 Pfam PF00857 Isochorismatase family 14 165 6.2E-23 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG60_17075 da364b090568a8d0a9b05269cc102f4d 207 SUPERFAMILY SSF52499 5 201 8.9E-53 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_07850 ff830ca39ee6cb2d1605794153d8033d 438 SUPERFAMILY SSF63825 111 325 4.97E-5 T 23-10-2018 CDG60_07850 ff830ca39ee6cb2d1605794153d8033d 438 Pfam PF13449 Esterase-like activity of phytase 46 402 1.5E-56 T 23-10-2018 IPR027372 Phytase-like domain CDG60_14805 deb1601e697cdc537b12de76e2ec4975 231 Gene3D G3DSA:3.40.190.10 112 193 4.3E-70 T 23-10-2018 CDG60_14805 deb1601e697cdc537b12de76e2ec4975 231 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 160 181 - T 23-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CDG60_14805 deb1601e697cdc537b12de76e2ec4975 231 Pfam PF01634 ATP phosphoribosyltransferase 70 221 3.8E-49 T 23-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CDG60_14805 deb1601e697cdc537b12de76e2ec4975 231 Gene3D G3DSA:3.40.190.10 22 213 4.3E-70 T 23-10-2018 CDG60_14805 deb1601e697cdc537b12de76e2ec4975 231 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 21 201 3.5E-57 T 23-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CDG60_14805 deb1601e697cdc537b12de76e2ec4975 231 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 20 225 54.675 T 23-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CDG60_14805 deb1601e697cdc537b12de76e2ec4975 231 SUPERFAMILY SSF53850 19 224 2.06E-64 T 23-10-2018 CDG60_03325 abb78e996e7b9e26a6a7be438d5be721 481 Pfam PF00171 Aldehyde dehydrogenase family 11 446 1.2E-91 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_03325 abb78e996e7b9e26a6a7be438d5be721 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG60_03325 abb78e996e7b9e26a6a7be438d5be721 481 SUPERFAMILY SSF53720 16 475 3.01E-115 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_03325 abb78e996e7b9e26a6a7be438d5be721 481 PIRSF PIRSF036492 1 481 2.5E-158 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 CDG60_03325 abb78e996e7b9e26a6a7be438d5be721 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 253 264 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG60_03325 abb78e996e7b9e26a6a7be438d5be721 481 Gene3D G3DSA:3.40.605.10 33 451 7.7E-151 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_03325 abb78e996e7b9e26a6a7be438d5be721 481 Gene3D G3DSA:3.40.309.10 229 431 7.7E-151 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_02145 eecbe2c5542065401b1d8fe7627869c2 262 Gene3D G3DSA:3.40.50.10090 35 172 7.7E-43 T 23-10-2018 CDG60_02145 eecbe2c5542065401b1d8fe7627869c2 262 SUPERFAMILY SSF69618 8 234 2.35E-37 T 23-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_02145 eecbe2c5542065401b1d8fe7627869c2 262 Gene3D G3DSA:3.40.50.10090 8 224 7.7E-43 T 23-10-2018 CDG60_02145 eecbe2c5542065401b1d8fe7627869c2 262 Pfam PF02602 Uroporphyrinogen-III synthase HemD 18 223 7.6E-29 T 23-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 426 31.941 T 23-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 Pfam PF03129 Anticodon binding domain 346 424 1.4E-10 T 23-10-2018 IPR004154 Anticodon-binding CDG60_15145 a8f2cadc4416901080148d7164e14813 431 SUPERFAMILY SSF55681 7 324 2.39E-95 T 23-10-2018 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 416 2.1E-148 T 23-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 PIRSF PIRSF001549 1 427 1.0E-121 T 23-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 Gene3D G3DSA:3.30.930.10 192 328 2.9E-47 T 23-10-2018 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 Gene3D G3DSA:3.30.930.10 1 191 7.9E-72 T 23-10-2018 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 Pfam PF13393 Histidyl-tRNA synthetase 9 316 1.7E-46 T 23-10-2018 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 SUPERFAMILY SSF52954 339 426 6.87E-15 T 23-10-2018 CDG60_15145 a8f2cadc4416901080148d7164e14813 431 Gene3D G3DSA:3.40.50.800 329 425 4.5E-26 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily CDG60_17445 7b9de40c0d73197b3b3483b95006e618 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 84 6.9E-13 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_17445 7b9de40c0d73197b3b3483b95006e618 222 Gene3D G3DSA:1.20.1050.10 86 194 7.7E-62 T 23-10-2018 CDG60_17445 7b9de40c0d73197b3b3483b95006e618 222 Gene3D G3DSA:3.40.30.10 3 201 7.7E-62 T 23-10-2018 CDG60_17445 7b9de40c0d73197b3b3483b95006e618 222 SUPERFAMILY SSF52833 8 94 2.49E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_17445 7b9de40c0d73197b3b3483b95006e618 222 SUPERFAMILY SSF47616 84 205 1.56E-14 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG60_10330 196f5ccd7b597d587c947be88d20e588 208 Gene3D G3DSA:3.10.610.10 36 141 1.4E-8 T 23-10-2018 CDG60_10330 196f5ccd7b597d587c947be88d20e588 208 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10330 196f5ccd7b597d587c947be88d20e588 208 Pfam PF11612 Type II secretion system (T2SS), protein J 59 188 8.4E-16 T 23-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CDG60_10330 196f5ccd7b597d587c947be88d20e588 208 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 3.2E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10330 196f5ccd7b597d587c947be88d20e588 208 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 3.5E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10330 196f5ccd7b597d587c947be88d20e588 208 SUPERFAMILY SSF54523 38 198 3.45E-22 T 23-10-2018 CDG60_10330 196f5ccd7b597d587c947be88d20e588 208 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 5 184 1.1E-19 T 23-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 Gene3D G3DSA:3.30.565.10 310 450 1.1E-16 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 Pfam PF08521 Two-component sensor kinase N-terminal 19 153 4.6E-6 T 23-10-2018 IPR013727 Two-component sensor kinase, N-terminal CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 448 8.9E-11 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 Gene3D G3DSA:1.10.287.130 182 307 6.1E-13 T 23-10-2018 CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 SUPERFAMILY SSF55874 296 449 2.49E-20 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 SUPERFAMILY SSF47384 222 305 6.87E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 305 3.3E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 SMART SM00387 349 451 6.5E-12 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_09005 c604dba0288bc2ecf02c54e5ad6b0d88 451 SMART SM00388 237 306 9.6E-4 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_07675 335e6aeb26e579ffb416ce82ddd5ada1 329 TIGRFAM TIGR00874 talAB: transaldolase 5 319 3.3E-125 T 23-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG60_07675 335e6aeb26e579ffb416ce82ddd5ada1 329 ProSitePatterns PS01054 Transaldolase signature 1. 32 40 - T 23-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG60_07675 335e6aeb26e579ffb416ce82ddd5ada1 329 Gene3D G3DSA:3.20.20.70 1 322 2.1E-123 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_07675 335e6aeb26e579ffb416ce82ddd5ada1 329 ProSitePatterns PS00958 Transaldolase active site. 130 147 - T 23-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG60_07675 335e6aeb26e579ffb416ce82ddd5ada1 329 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 315 4.2E-89 T 23-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG60_07675 335e6aeb26e579ffb416ce82ddd5ada1 329 SUPERFAMILY SSF51569 4 319 5.97E-101 T 23-10-2018 CDG60_17185 61ed9c685a6ff914f9ba3100bfebdaf5 658 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 496 3.6E-191 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG60_17185 61ed9c685a6ff914f9ba3100bfebdaf5 658 ProSitePatterns PS01303 BCCT family of transporters signature. 316 325 - T 23-10-2018 IPR018093 BCCT transporter, conserved site CDG60_17185 61ed9c685a6ff914f9ba3100bfebdaf5 658 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 497 2.1E-163 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG60_15895 9b500c376dc39f787e96e961f5fad462 146 Gene3D G3DSA:3.100.10.10 72 146 2.5E-12 T 23-10-2018 CDG60_15895 9b500c376dc39f787e96e961f5fad462 146 SUPERFAMILY SSF52080 6 145 3.92E-41 T 23-10-2018 IPR036227 Ribosomal L18e/L15P superfamily CDG60_15895 9b500c376dc39f787e96e961f5fad462 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 3.4E-43 T 23-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15895 9b500c376dc39f787e96e961f5fad462 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 6.6E-27 T 23-10-2018 IPR021131 Ribosomal protein L18e/L15P CDG60_15895 9b500c376dc39f787e96e961f5fad462 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 17.642 T 23-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CDG60_15895 9b500c376dc39f787e96e961f5fad462 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 23-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 SMART SM00870 4 316 3.5E-19 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 SUPERFAMILY SSF53774 1 319 3.66E-59 T 23-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 Gene3D G3DSA:3.40.50.1170 2 202 7.5E-37 T 23-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 PIRSF PIRSF001220 1 308 8.2E-35 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 Gene3D G3DSA:3.40.50.40 206 317 2.0E-13 T 23-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 Pfam PF00710 Asparaginase, N-terminal 4 177 1.2E-34 T 23-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 PIRSF PIRSF500176 1 298 8.5E-48 T 23-10-2018 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 3.2E-9 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 PRINTS PR00139 Asparaginase/glutaminase family signature 254 272 3.2E-9 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG60_03185 8af4bfc2393d5f5d3f7e6f58d871f9ce 319 PRINTS PR00139 Asparaginase/glutaminase family signature 78 96 3.2E-9 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 PIRSF PIRSF006107 1 712 0.0 T 23-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 SUPERFAMILY SSF75138 229 353 1.22E-18 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 Pfam PF07085 DRTGG domain 233 344 1.3E-21 T 23-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 Pfam PF13500 AAA domain 2 228 2.8E-25 T 23-10-2018 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 Gene3D G3DSA:3.40.50.10750 527 680 7.3E-129 T 23-10-2018 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 704 7.9E-118 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 SUPERFAMILY SSF52540 1 239 4.67E-18 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 704 3.2E-129 T 23-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 Gene3D G3DSA:3.40.50.10950 399 706 7.3E-129 T 23-10-2018 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 SUPERFAMILY SSF53659 392 707 1.52E-88 T 23-10-2018 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 Gene3D G3DSA:3.40.50.300 1 225 5.1E-12 T 23-10-2018 CDG60_15555 d7a1202dd53aae1155d08d9817dc4360 712 Gene3D G3DSA:3.40.1390.20 226 366 9.6E-15 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDG60_15235 580ad1e21e09c960dba99c2bb5e74470 179 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 17.597 T 23-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CDG60_15235 580ad1e21e09c960dba99c2bb5e74470 179 Pfam PF04390 Lipopolysaccharide-assembly 46 159 3.6E-5 T 23-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CDG60_15235 580ad1e21e09c960dba99c2bb5e74470 179 Gene3D G3DSA:3.30.160.150 28 169 1.9E-36 T 23-10-2018 CDG60_12650 ac79557501ced14790e449689c95b359 319 Gene3D G3DSA:3.30.1380.10 165 290 6.4E-25 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_12650 ac79557501ced14790e449689c95b359 319 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 226 291 4.9E-14 T 23-10-2018 IPR039561 Peptidase M15C GO:0008233 CDG60_12650 ac79557501ced14790e449689c95b359 319 SUPERFAMILY SSF55166 171 291 3.92E-24 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_14690 2d11ad3237c6f953add83aedb0e0304f 371 Gene3D G3DSA:3.20.20.70 1 359 2.6E-119 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_14690 2d11ad3237c6f953add83aedb0e0304f 371 SUPERFAMILY SSF51395 1 363 1.01E-109 T 23-10-2018 CDG60_14690 2d11ad3237c6f953add83aedb0e0304f 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 342 1.7E-70 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG60_06260 632711e4ede37a1fb95ee7fd931c991f 283 Pfam PF03466 LysR substrate binding domain 90 277 3.9E-18 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_06260 632711e4ede37a1fb95ee7fd931c991f 283 SUPERFAMILY SSF53850 90 278 2.35E-18 T 23-10-2018 CDG60_06260 632711e4ede37a1fb95ee7fd931c991f 283 Gene3D G3DSA:1.10.10.10 3 90 3.9E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06260 632711e4ede37a1fb95ee7fd931c991f 283 Gene3D G3DSA:3.40.190.290 91 282 1.0E-17 T 23-10-2018 CDG60_06260 632711e4ede37a1fb95ee7fd931c991f 283 SUPERFAMILY SSF46785 2 102 3.21E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_06260 632711e4ede37a1fb95ee7fd931c991f 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.6E-14 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_02720 5cfbc519beab8084c72528045d5ccee1 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 279 3.0E-80 T 23-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CDG60_02720 5cfbc519beab8084c72528045d5ccee1 613 Gene3D G3DSA:3.40.50.720 396 559 2.4E-36 T 23-10-2018 CDG60_02720 5cfbc519beab8084c72528045d5ccee1 613 Pfam PF00999 Sodium/hydrogen exchanger family 9 370 3.9E-67 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDG60_02720 5cfbc519beab8084c72528045d5ccee1 613 Pfam PF02254 TrkA-N domain 400 512 7.5E-25 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDG60_02720 5cfbc519beab8084c72528045d5ccee1 613 Gene3D G3DSA:1.20.1530.20 1 380 6.8E-86 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_02720 5cfbc519beab8084c72528045d5ccee1 613 SUPERFAMILY SSF51735 399 527 7.16E-31 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_00730 174afb4fcfc9171296f8d6003095ecb8 286 SUPERFAMILY SSF110710 1 266 3.14E-76 T 23-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like CDG60_00730 174afb4fcfc9171296f8d6003095ecb8 286 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 23 263 9.6E-59 T 23-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Gene3D G3DSA:3.30.70.270 4 163 9.9E-64 T 23-10-2018 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Gene3D G3DSA:3.30.1490.100 239 347 4.9E-19 T 23-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 SUPERFAMILY SSF56672 1 233 2.4E-92 T 23-10-2018 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Gene3D G3DSA:2.30.40.20 21 72 9.9E-64 T 23-10-2018 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 345 1.4E-14 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 SUPERFAMILY SSF100879 237 336 2.35E-20 T 23-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 36.95 T 23-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Pfam PF00817 impB/mucB/samB family 7 153 1.5E-52 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Pfam PF11798 IMS family HHH motif 168 196 8.5E-9 T 23-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CDG60_01800 8b42ba9c2e598ab31e772e8cb64f9e8c 351 Gene3D G3DSA:1.10.150.20 165 227 5.1E-20 T 23-10-2018 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 SUPERFAMILY SSF56645 2 239 4.84E-79 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 1.7E-30 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 4.0E-51 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 7.1E-28 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 SUPERFAMILY SSF47203 226 376 2.09E-58 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 PIRSF PIRSF016578 130 193 0.0015 T 23-10-2018 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 PIRSF PIRSF016578 226 376 8.9E-13 T 23-10-2018 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 PIRSF PIRSF016578 4 94 1.6E-5 T 23-10-2018 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 Gene3D G3DSA:1.20.140.10 232 377 1.4E-56 T 23-10-2018 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 Gene3D G3DSA:1.10.540.10 1 118 4.3E-38 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_07405 a6f8b0153b412c7510be78c447ccc8fd 378 Gene3D G3DSA:2.40.110.10 119 231 3.1E-44 T 23-10-2018 CDG60_16155 2f1da43adfb13aaa9e58b7c34a7f8506 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.309 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG60_16155 2f1da43adfb13aaa9e58b7c34a7f8506 200 Gene3D G3DSA:3.40.50.10990 2 175 2.1E-74 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG60_16155 2f1da43adfb13aaa9e58b7c34a7f8506 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 194 1.3E-77 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG60_16155 2f1da43adfb13aaa9e58b7c34a7f8506 200 Pfam PF00925 GTP cyclohydrolase II 7 171 2.6E-67 T 23-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG60_16155 2f1da43adfb13aaa9e58b7c34a7f8506 200 SUPERFAMILY SSF142695 3 174 4.84E-63 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG60_00315 285ed34de1e34401121b61c709f5992d 270 SUPERFAMILY SSF56281 51 261 7.58E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_00315 285ed34de1e34401121b61c709f5992d 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.4E-9 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_00315 285ed34de1e34401121b61c709f5992d 270 SMART SM00849 74 250 2.4E-13 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_00315 285ed34de1e34401121b61c709f5992d 270 Gene3D G3DSA:3.60.15.10 29 270 2.6E-97 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_06125 a45aab3f911b19cc3631315cda0aa275 318 Gene3D G3DSA:2.60.40.3680 20 122 3.1E-5 T 23-10-2018 CDG60_06125 a45aab3f911b19cc3631315cda0aa275 318 Pfam PF14415 Domain of unknown function (DUF4424) 18 311 3.0E-80 T 23-10-2018 IPR025538 Domain of unknown function DUF4424 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 SUPERFAMILY SSF55486 212 456 3.66E-72 T 23-10-2018 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Gene3D G3DSA:1.25.50.10 558 868 1.1E-68 T 23-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 19 866 0.0 T 23-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 560 867 5.3E-71 T 23-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Gene3D G3DSA:2.60.40.1840 451 557 4.4E-25 T 23-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Gene3D G3DSA:2.60.40.1730 22 201 3.5E-65 T 23-10-2018 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 451 556 9.2E-23 T 23-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Gene3D G3DSA:1.10.390.10 287 450 4.4E-59 T 23-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 SUPERFAMILY SSF63737 12 200 3.79E-38 T 23-10-2018 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 4.9E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 4.9E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 4.9E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 4.9E-9 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Gene3D G3DSA:1.10.1740.60 202 286 1.6E-38 T 23-10-2018 CDG60_07635 cfe949e7ca11c1ba31c4893dc680b466 869 Pfam PF01433 Peptidase family M1 domain 215 443 2.9E-55 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 Gene3D G3DSA:2.40.110.10 130 228 2.1E-27 T 23-10-2018 CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 SUPERFAMILY SSF56645 26 228 1.26E-35 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 SUPERFAMILY SSF47203 243 384 8.14E-11 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 124 3.3E-6 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 PIRSF PIRSF016578 4 394 1.4E-28 T 23-10-2018 CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 383 2.2E-14 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 Gene3D G3DSA:1.20.140.10 229 405 6.4E-48 T 23-10-2018 CDG60_14275 c4c003bb93ff99eea1efb77f222d93ec 425 Gene3D G3DSA:1.10.540.10 15 129 1.1E-20 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_04485 0a4ee3f5894982d7e312a7154f5dff81 419 Gene3D G3DSA:3.50.50.60 1 70 9.9E-12 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_04485 0a4ee3f5894982d7e312a7154f5dff81 419 Pfam PF01266 FAD dependent oxidoreductase 2 397 3.1E-73 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG60_04485 0a4ee3f5894982d7e312a7154f5dff81 419 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 47.993 T 23-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CDG60_04485 0a4ee3f5894982d7e312a7154f5dff81 419 Gene3D G3DSA:3.50.50.60 105 403 4.6E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_04485 0a4ee3f5894982d7e312a7154f5dff81 419 Gene3D G3DSA:3.30.9.10 134 361 4.6E-52 T 23-10-2018 CDG60_04485 0a4ee3f5894982d7e312a7154f5dff81 419 SUPERFAMILY SSF51905 1 416 1.81E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_04485 0a4ee3f5894982d7e312a7154f5dff81 419 SUPERFAMILY SSF54373 270 359 8.5E-16 T 23-10-2018 CDG60_14210 c12f0f9922d00e668427375b075419fc 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_14210 c12f0f9922d00e668427375b075419fc 244 Gene3D G3DSA:3.40.50.720 1 244 3.9E-82 T 23-10-2018 CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.1E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.1E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.1E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.1E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.1E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 SUPERFAMILY SSF51735 4 243 2.68E-79 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.0E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.0E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.0E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14210 c12f0f9922d00e668427375b075419fc 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 9.0E-69 T 23-10-2018 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 SMART SM00382 160 303 3.2E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 Gene3D G3DSA:1.10.8.60 312 387 1.8E-21 T 23-10-2018 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 SUPERFAMILY SSF46689 354 471 1.79E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 Gene3D G3DSA:1.10.10.60 396 473 3.8E-15 T 23-10-2018 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 1.4E-15 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 1.9E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 1.9E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 Gene3D G3DSA:3.40.50.2300 2 132 2.7E-31 T 23-10-2018 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 Pfam PF00072 Response regulator receiver domain 7 116 2.0E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 SUPERFAMILY SSF52540 140 382 2.22E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 SUPERFAMILY SSF52172 6 185 4.98E-40 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 Gene3D G3DSA:3.40.50.300 133 311 1.5E-61 T 23-10-2018 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 Pfam PF00158 Sigma-54 interaction domain 140 306 8.4E-67 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG60_02010 2202424b0cb1af0eb117c653a0cfee63 475 SMART SM00448 5 116 9.5E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 SUPERFAMILY SSF55103 226 468 9.16E-61 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 466 2.4E-59 T 23-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 Gene3D G3DSA:3.30.43.10 1 98 3.4E-26 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 Gene3D G3DSA:1.10.45.10 427 466 4.0E-14 T 23-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 Gene3D G3DSA:3.30.70.2740 341 426 9.0E-27 T 23-10-2018 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 Pfam PF01565 FAD binding domain 46 184 1.7E-39 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 Gene3D G3DSA:3.30.70.2190 222 338 1.5E-25 T 23-10-2018 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 SUPERFAMILY SSF56176 4 222 1.87E-66 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_16365 239bf911565d7c9ce125eb1d4b1ca76b 469 Gene3D G3DSA:3.30.465.10 100 220 3.0E-39 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 SMART SM00996 10 459 4.2E-275 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 PIRSF PIRSF001109 1 460 6.1E-180 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 SUPERFAMILY SSF51735 197 373 1.18E-52 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_06115 066c517851b65447fd73880c0c55ce86 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 197 372 5.5E-58 T 23-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 23-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 219 235 - T 23-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 Gene3D G3DSA:3.40.50.1480 2 147 3.8E-70 T 23-10-2018 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 SUPERFAMILY SSF52283 8 460 3.74E-108 T 23-10-2018 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 Gene3D G3DSA:3.40.50.1480 369 460 3.7E-29 T 23-10-2018 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 Gene3D G3DSA:3.40.50.1480 148 203 4.0E-21 T 23-10-2018 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 SMART SM00997 197 372 5.6E-84 T 23-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 147 4.5E-73 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 452 4.0E-157 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 Gene3D G3DSA:3.40.50.720 204 368 1.6E-67 T 23-10-2018 CDG60_06115 066c517851b65447fd73880c0c55ce86 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 452 44.976 T 23-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 CDG60_00515 72a9b3e0db5e6f1f8abdb4d914a870de 96 Gene3D G3DSA:1.10.260.40 32 93 7.8E-6 T 23-10-2018 CDG60_00515 72a9b3e0db5e6f1f8abdb4d914a870de 96 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 7 93 1.8E-38 T 23-10-2018 IPR014057 Uncharacterized protein HI1420 CDG60_00515 72a9b3e0db5e6f1f8abdb4d914a870de 96 Pfam PF01381 Helix-turn-helix 47 92 6.0E-6 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_00515 72a9b3e0db5e6f1f8abdb4d914a870de 96 SUPERFAMILY SSF47413 25 91 5.18E-11 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Gene3D G3DSA:1.10.8.60 356 437 1.6E-30 T 23-10-2018 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.7E-14 T 23-10-2018 IPR004176 Clp, N-terminal CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 SUPERFAMILY SSF52540 436 728 3.49E-76 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 SMART SM00382 206 351 3.7E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 SMART SM00382 486 653 1.0E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Gene3D G3DSA:1.10.8.60 653 755 6.0E-28 T 23-10-2018 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 SUPERFAMILY SSF52540 168 420 1.82E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 306 5.3E-13 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Gene3D G3DSA:1.10.1780.10 1 143 1.5E-38 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Gene3D G3DSA:3.40.50.300 167 355 1.6E-63 T 23-10-2018 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 732 2.3E-23 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 23-10-2018 IPR028299 ClpA/B, conserved site 2 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Gene3D G3DSA:3.40.50.300 438 650 2.7E-79 T 23-10-2018 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 23-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 644 7.0E-47 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 9.6E-38 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 9.6E-38 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 9.6E-38 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 9.6E-38 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 SUPERFAMILY SSF81923 1 141 7.32E-49 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG60_08445 9f1bd610a6c31d44a1b125fb4d29512e 758 SMART SM01086 652 744 1.0E-26 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_06975 4d6d63cfbdcbd6c0317b56794d032e9a 261 SUPERFAMILY SSF53474 9 258 2.45E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_06975 4d6d63cfbdcbd6c0317b56794d032e9a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.3E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_06975 4d6d63cfbdcbd6c0317b56794d032e9a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.3E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_06975 4d6d63cfbdcbd6c0317b56794d032e9a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 1.3E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_06975 4d6d63cfbdcbd6c0317b56794d032e9a 261 Pfam PF00561 alpha/beta hydrolase fold 31 135 4.6E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_06975 4d6d63cfbdcbd6c0317b56794d032e9a 261 Gene3D G3DSA:3.40.50.1820 3 260 1.2E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 100 1.8E-20 T 23-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 Gene3D G3DSA:1.10.3730.10 165 272 6.4E-40 T 23-10-2018 CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 267 26.213 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 SUPERFAMILY SSF48179 163 270 5.27E-33 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 PIRSF PIRSF000193 7 270 3.5E-71 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 2.3E-34 T 23-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 SUPERFAMILY SSF51735 8 160 5.82E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 9 267 2.1E-76 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 Gene3D G3DSA:3.40.50.720 3 164 6.2E-47 T 23-10-2018 CDG60_14935 e56c3b72af3c87dc528e9938eab28d2f 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 SUPERFAMILY SSF52343 107 252 4.19E-33 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 4.4E-6 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 53 60 4.4E-6 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 4.4E-6 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 Pfam PF00970 Oxidoreductase FAD-binding domain 18 94 8.4E-9 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 Gene3D G3DSA:2.40.30.10 1 97 3.0E-29 T 23-10-2018 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 149 6.2E-7 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 6.2E-7 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 6.2E-7 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 6.2E-7 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 Gene3D G3DSA:3.40.50.80 99 253 3.0E-40 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 SUPERFAMILY SSF63380 7 101 1.56E-24 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_13800 8351fb6a1f2aee51e957be7f9fec6325 253 Pfam PF00175 Oxidoreductase NAD-binding domain 116 229 3.1E-15 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 431 5.6E-7 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 Pfam PF06745 KaiC 76 151 6.2E-10 T 23-10-2018 IPR014774 KaiC-like domain CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.2E-191 T 23-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 PRINTS PR01874 DNA repair protein radA signature 176 200 7.1E-92 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 PRINTS PR01874 DNA repair protein radA signature 10 34 7.1E-92 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 PRINTS PR01874 DNA repair protein radA signature 126 143 7.1E-92 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 PRINTS PR01874 DNA repair protein radA signature 84 112 7.1E-92 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 PRINTS PR01874 DNA repair protein radA signature 215 243 7.1E-92 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 PRINTS PR01874 DNA repair protein radA signature 250 276 7.1E-92 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 PRINTS PR01874 DNA repair protein radA signature 323 346 7.1E-92 T 23-10-2018 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 42.589 T 23-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 Gene3D G3DSA:3.30.230.10 315 458 4.4E-17 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 SUPERFAMILY SSF54211 257 453 5.31E-39 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 SMART SM00382 92 247 6.2E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 SUPERFAMILY SSF52540 72 289 1.07E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06440 35c619b1e9c0d2b769a6200d6a7f0853 463 Gene3D G3DSA:3.40.50.300 68 285 7.4E-38 T 23-10-2018 CDG60_06285 16cf498033867c5944372a535ff07e02 384 Gene3D G3DSA:3.20.20.70 2 382 1.9E-125 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_06285 16cf498033867c5944372a535ff07e02 384 SUPERFAMILY SSF51395 5 376 4.95E-99 T 23-10-2018 CDG60_06285 16cf498033867c5944372a535ff07e02 384 Pfam PF01070 FMN-dependent dehydrogenase 13 375 4.1E-125 T 23-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 CDG60_06285 16cf498033867c5944372a535ff07e02 384 PIRSF PIRSF000138 1 380 2.3E-120 T 23-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDG60_06285 16cf498033867c5944372a535ff07e02 384 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.763 T 23-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 CDG60_06285 16cf498033867c5944372a535ff07e02 384 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 23-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDG60_05650 32527cf1df1436c38e2ebaa2f7c9a6eb 499 Gene3D G3DSA:1.20.1530.20 2 418 1.0E-6 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_05650 32527cf1df1436c38e2ebaa2f7c9a6eb 499 Pfam PF00999 Sodium/hydrogen exchanger family 24 408 1.3E-34 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDG60_03400 472328db2bc657b8601ec841831cb69b 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 417 5.0E-41 T 23-10-2018 IPR000160 GGDEF domain CDG60_03400 472328db2bc657b8601ec841831cb69b 689 SUPERFAMILY SSF141868 438 683 1.28E-81 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_03400 472328db2bc657b8601ec841831cb69b 689 SUPERFAMILY SSF55073 266 422 2.67E-43 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_03400 472328db2bc657b8601ec841831cb69b 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 420 7.3E-38 T 23-10-2018 IPR000160 GGDEF domain CDG60_03400 472328db2bc657b8601ec841831cb69b 689 Pfam PF03707 Bacterial signalling protein N terminal repeat 185 238 1.5E-4 T 23-10-2018 IPR005330 MHYT domain CDG60_03400 472328db2bc657b8601ec841831cb69b 689 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 172 7.2E-15 T 23-10-2018 IPR005330 MHYT domain CDG60_03400 472328db2bc657b8601ec841831cb69b 689 Pfam PF03707 Bacterial signalling protein N terminal repeat 53 109 3.8E-16 T 23-10-2018 IPR005330 MHYT domain CDG60_03400 472328db2bc657b8601ec841831cb69b 689 Gene3D G3DSA:3.30.70.270 255 434 4.0E-50 T 23-10-2018 CDG60_03400 472328db2bc657b8601ec841831cb69b 689 Pfam PF00563 EAL domain 438 671 5.3E-67 T 23-10-2018 IPR001633 EAL domain CDG60_03400 472328db2bc657b8601ec841831cb69b 689 Gene3D G3DSA:3.20.20.450 435 685 1.4E-90 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_03400 472328db2bc657b8601ec841831cb69b 689 SMART SM00267 250 421 2.9E-49 T 23-10-2018 IPR000160 GGDEF domain CDG60_03400 472328db2bc657b8601ec841831cb69b 689 SMART SM00052 432 678 1.2E-99 T 23-10-2018 IPR001633 EAL domain CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 23-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 PIRSF PIRSF001554 1 388 2.4E-150 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 SUPERFAMILY SSF56059 1 239 5.11E-79 T 23-10-2018 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 Gene3D G3DSA:3.40.50.261 241 388 1.2E-54 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 4.3E-161 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 SUPERFAMILY SSF52210 240 386 7.98E-53 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 Pfam PF00549 CoA-ligase 263 383 3.1E-25 T 23-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 Pfam PF08442 ATP-grasp domain 2 203 3.8E-78 T 23-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 Gene3D G3DSA:3.30.1490.20 21 105 1.3E-89 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 Gene3D G3DSA:3.30.470.20 1 235 1.3E-89 T 23-10-2018 CDG60_05615 bf44befda7d81fd9663e7b07329ec329 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.691 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 SUPERFAMILY SSF50615 11 95 1.57E-27 T 23-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 512 1.2E-248 T 23-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 Gene3D G3DSA:2.40.30.20 2 94 1.8E-31 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 SUPERFAMILY SSF47917 384 512 5.23E-45 T 23-10-2018 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 SUPERFAMILY SSF52540 97 382 1.33E-91 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 3.9E-44 T 23-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 2.8E-73 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.499 T 23-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 Gene3D G3DSA:3.40.50.300 95 383 2.5E-128 T 23-10-2018 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 3.0E-14 T 23-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 23-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01575 ad291f51b9c230d2b23f1a0f077f5090 514 Gene3D G3DSA:1.20.150.20 384 514 4.0E-46 T 23-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_17315 e215074839b992591a230fb57839b9f9 443 SUPERFAMILY SSF53738 2 181 3.57E-47 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 2.0E-40 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Gene3D G3DSA:3.40.120.10 257 336 3.6E-66 T 23-10-2018 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Gene3D G3DSA:3.30.310.50 367 443 1.3E-22 T 23-10-2018 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Gene3D G3DSA:3.40.120.10 175 359 3.6E-66 T 23-10-2018 CDG60_17315 e215074839b992591a230fb57839b9f9 443 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 23-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 SUPERFAMILY SSF53738 259 362 2.16E-27 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 439 2.3E-184 T 23-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 9.9E-20 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Gene3D G3DSA:3.40.120.10 1 154 1.3E-45 T 23-10-2018 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 439 3.4E-15 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 SUPERFAMILY SSF53738 156 255 8.63E-33 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 361 2.8E-31 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.2E-14 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.2E-14 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.2E-14 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 45.889 T 23-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_17315 e215074839b992591a230fb57839b9f9 443 SUPERFAMILY SSF55957 355 441 1.44E-21 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_14790 59518b3680731410c66d836ffaf1b6df 365 Pfam PF00155 Aminotransferase class I and II 32 359 3.9E-56 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_14790 59518b3680731410c66d836ffaf1b6df 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 364 57.352 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDG60_14790 59518b3680731410c66d836ffaf1b6df 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 361 2.5E-94 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDG60_14790 59518b3680731410c66d836ffaf1b6df 365 Gene3D G3DSA:3.40.640.10 45 271 2.7E-110 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_14790 59518b3680731410c66d836ffaf1b6df 365 SUPERFAMILY SSF53383 12 361 4.54E-76 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_14790 59518b3680731410c66d836ffaf1b6df 365 Gene3D G3DSA:3.90.1150.10 27 353 2.7E-110 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_13415 4be8667cd014ad15a7cab72097c8ad8b 176 SMART SM01322 1 174 2.0E-90 T 23-10-2018 IPR009822 YaeQ CDG60_13415 4be8667cd014ad15a7cab72097c8ad8b 176 Pfam PF07152 YaeQ protein 1 171 3.7E-63 T 23-10-2018 IPR009822 YaeQ CDG60_13415 4be8667cd014ad15a7cab72097c8ad8b 176 PIRSF PIRSF011484 1 176 7.0E-57 T 23-10-2018 IPR009822 YaeQ CDG60_13415 4be8667cd014ad15a7cab72097c8ad8b 176 SUPERFAMILY SSF52980 2 176 1.1E-60 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_13415 4be8667cd014ad15a7cab72097c8ad8b 176 Gene3D G3DSA:3.10.640.10 1 176 3.8E-65 T 23-10-2018 IPR038590 YaeQ superfamily CDG60_01290 f731276144ad58ac3f1ef382c8442859 206 Pfam PF13649 Methyltransferase domain 38 135 2.6E-6 T 23-10-2018 CDG60_01290 f731276144ad58ac3f1ef382c8442859 206 SUPERFAMILY SSF53335 3 147 3.11E-12 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_01290 f731276144ad58ac3f1ef382c8442859 206 Gene3D G3DSA:3.40.50.150 4 206 1.6E-30 T 23-10-2018 CDG60_16335 90d09e0d2d3601961b50f50d2865129c 298 PIRSF PIRSF006232 4 298 9.2E-76 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG60_16335 90d09e0d2d3601961b50f50d2865129c 298 SUPERFAMILY SSF51182 26 291 1.06E-67 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_16335 90d09e0d2d3601961b50f50d2865129c 298 Gene3D G3DSA:2.60.120.10 33 284 8.6E-73 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_16335 90d09e0d2d3601961b50f50d2865129c 298 Pfam PF02678 Pirin 25 127 1.2E-29 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG60_16335 90d09e0d2d3601961b50f50d2865129c 298 Gene3D G3DSA:2.60.120.10 149 259 8.6E-73 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_16335 90d09e0d2d3601961b50f50d2865129c 298 Pfam PF05726 Pirin C-terminal cupin domain 187 290 2.0E-23 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDG60_13175 028cefb0a5a9e3434617cfdd18abce3d 482 Gene3D G3DSA:2.40.160.130 24 477 3.0E-159 T 23-10-2018 IPR038636 Capsule assembly protein Wzi superfamily CDG60_13175 028cefb0a5a9e3434617cfdd18abce3d 482 Pfam PF14052 Capsule assembly protein Wzi 93 468 2.3E-111 T 23-10-2018 IPR026950 Capsule assembly protein Wzi CDG60_11270 84cdd0891ee07c4b21dd7bf17b88a14c 664 Pfam PF07819 PGAP1-like protein 437 478 1.1E-5 T 23-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 CDG60_11270 84cdd0891ee07c4b21dd7bf17b88a14c 664 Gene3D G3DSA:3.40.50.1820 371 637 2.2E-23 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11270 84cdd0891ee07c4b21dd7bf17b88a14c 664 SUPERFAMILY SSF53474 373 639 1.54E-22 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_10565 ab255b8967cbb7729160f76ccf05f272 245 Pfam PF00106 short chain dehydrogenase 8 198 1.4E-36 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10565 ab255b8967cbb7729160f76ccf05f272 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.2E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10565 ab255b8967cbb7729160f76ccf05f272 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.2E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10565 ab255b8967cbb7729160f76ccf05f272 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.2E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10565 ab255b8967cbb7729160f76ccf05f272 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10565 ab255b8967cbb7729160f76ccf05f272 245 Gene3D G3DSA:3.40.50.720 3 245 1.0E-53 T 23-10-2018 CDG60_10565 ab255b8967cbb7729160f76ccf05f272 245 SUPERFAMILY SSF51735 7 240 3.77E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.1E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.1E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 SUPERFAMILY SSF51735 6 255 1.01E-63 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 168 191 3.9E-46 T 23-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 9 26 3.9E-46 T 23-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 207 226 3.9E-46 T 23-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 233 252 3.9E-46 T 23-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 83 100 3.9E-46 T 23-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 103 123 3.9E-46 T 23-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 Gene3D G3DSA:3.40.50.720 3 256 8.6E-64 T 23-10-2018 CDG60_13100 1061f45758752cac9a00aae05108ebf0 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 254 1.2E-51 T 23-10-2018 CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 Gene3D G3DSA:2.40.170.20 750 1034 2.0E-21 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 Pfam PF07660 Secretin and TonB N terminus short domain 64 112 1.1E-8 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 Pfam PF00593 TonB dependent receptor 585 1033 2.2E-22 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 Gene3D G3DSA:2.170.130.10 156 284 6.0E-35 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 SMART SM00965 62 112 3.2E-9 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 Gene3D G3DSA:3.55.50.30 38 119 9.9E-21 T 23-10-2018 CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 Gene3D G3DSA:2.40.170.20 336 652 5.2E-55 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 SUPERFAMILY SSF56935 159 1034 2.44E-63 T 23-10-2018 CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 Pfam PF07715 TonB-dependent Receptor Plug Domain 167 257 1.8E-10 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_06335 50033cceeea8eaef12686885e0a2685c 1034 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 1017 1034 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG60_05385 63df0764538126ba9cbb8e9b3d7ca056 219 SUPERFAMILY SSF55821 17 217 3.2E-80 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG60_05385 63df0764538126ba9cbb8e9b3d7ca056 219 Gene3D G3DSA:3.90.870.10 7 218 1.7E-84 T 23-10-2018 CDG60_05385 63df0764538126ba9cbb8e9b3d7ca056 219 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 22 213 2.5E-78 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_05385 63df0764538126ba9cbb8e9b3d7ca056 219 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 40.516 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_05385 63df0764538126ba9cbb8e9b3d7ca056 219 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 19 214 3.4E-74 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_14910 69349eeb95d641eea5c38c9bfe5ed6b1 309 SUPERFAMILY SSF82689 183 274 3.53E-24 T 23-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CDG60_14910 69349eeb95d641eea5c38c9bfe5ed6b1 309 SUPERFAMILY SSF82861 27 109 5.23E-8 T 23-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CDG60_14910 69349eeb95d641eea5c38c9bfe5ed6b1 309 Pfam PF00924 Mechanosensitive ion channel 70 270 1.7E-42 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CDG60_14910 69349eeb95d641eea5c38c9bfe5ed6b1 309 Gene3D G3DSA:2.30.30.60 127 180 2.6E-8 T 23-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CDG60_14910 69349eeb95d641eea5c38c9bfe5ed6b1 309 SUPERFAMILY SSF50182 112 181 5.89E-11 T 23-10-2018 IPR010920 LSM domain superfamily CDG60_14910 69349eeb95d641eea5c38c9bfe5ed6b1 309 Gene3D G3DSA:3.30.70.100 182 275 1.8E-23 T 23-10-2018 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 839 2.5E-234 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Gene3D G3DSA:3.10.20.310 22 95 1.8E-16 T 23-10-2018 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Gene3D G3DSA:3.10.20.310 271 347 2.8E-13 T 23-10-2018 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 7 839 23.367 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Pfam PF07244 Surface antigen variable number repeat 272 348 9.1E-9 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Pfam PF07244 Surface antigen variable number repeat 180 267 3.0E-13 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Pfam PF07244 Surface antigen variable number repeat 98 176 8.2E-13 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Pfam PF07244 Surface antigen variable number repeat 352 425 4.6E-15 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Gene3D G3DSA:3.10.20.310 179 270 2.1E-19 T 23-10-2018 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Gene3D G3DSA:3.10.20.310 96 177 6.2E-17 T 23-10-2018 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 PIRSF PIRSF006076 1 839 8.9E-241 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Pfam PF01103 Surface antigen 452 839 2.2E-77 T 23-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Gene3D G3DSA:3.10.20.310 352 429 1.1E-23 T 23-10-2018 CDG60_10210 5092dfdb8e4b5f5467aa6565969887dc 839 Gene3D G3DSA:2.40.160.50 431 839 1.1E-105 T 23-10-2018 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 Pfam PF12833 Helix-turn-helix domain 228 306 6.4E-21 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 Gene3D G3DSA:1.10.10.2730 265 309 1.7E-15 T 23-10-2018 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 Gene3D G3DSA:1.10.10.60 207 264 6.2E-12 T 23-10-2018 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 SMART SM00342 222 305 9.6E-32 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 SUPERFAMILY SSF51182 34 76 3.94E-7 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 SUPERFAMILY SSF46689 259 308 1.84E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 SUPERFAMILY SSF46689 206 257 2.69E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 305 2.1E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 289 2.1E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 Pfam PF12852 Cupin 2 189 9.0E-25 T 23-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CDG60_08190 779d4da65b35d381830b97a68a79ddf2 310 Gene3D G3DSA:2.60.120.10 30 102 6.3E-7 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_11225 6db36f376cf3cec42d1a262880ee4b1e 185 Gene3D G3DSA:3.40.630.30 2 158 2.1E-44 T 23-10-2018 CDG60_11225 6db36f376cf3cec42d1a262880ee4b1e 185 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 1.7E-34 T 23-10-2018 IPR000182 GNAT domain CDG60_11225 6db36f376cf3cec42d1a262880ee4b1e 185 SUPERFAMILY SSF55729 2 174 3.73E-43 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 319 340 - T 23-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 Pfam PF09312 SurA N-terminal domain 31 149 2.6E-23 T 23-10-2018 IPR015391 SurA N-terminal CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 SUPERFAMILY SSF54534 178 273 1.65E-14 T 23-10-2018 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 Gene3D G3DSA:3.10.50.40 179 273 5.3E-50 T 23-10-2018 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 Hamap MF_01183 Chaperone SurA [surA]. 5 426 25.988 T 23-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 Gene3D G3DSA:3.10.50.40 278 418 1.2E-42 T 23-10-2018 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 Pfam PF13616 PPIC-type PPIASE domain 281 381 1.3E-30 T 23-10-2018 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 Gene3D G3DSA:1.10.4030.30 31 277 5.3E-50 T 23-10-2018 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 Pfam PF00639 PPIC-type PPIASE domain 192 269 1.0E-7 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 SUPERFAMILY SSF109998 31 205 8.24E-30 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily CDG60_10420 36877a42b5d14cecb528d66c449f6ab9 438 SUPERFAMILY SSF54534 282 382 1.24E-32 T 23-10-2018 CDG60_06660 ca5ed515986200771e300bcc79541b1b 149 Gene3D G3DSA:3.30.420.270 65 143 1.1E-8 T 23-10-2018 CDG60_06660 ca5ed515986200771e300bcc79541b1b 149 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 10 146 25.913 T 23-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDG60_06660 ca5ed515986200771e300bcc79541b1b 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 147 7.8E-26 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG60_06660 ca5ed515986200771e300bcc79541b1b 149 TIGRFAM TIGR02801 tolR: protein TolR 17 146 4.0E-41 T 23-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDG60_04930 efe46226ddeca77cb11cff01fc2ad4c0 215 SUPERFAMILY SSF52540 1 211 1.28E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04930 efe46226ddeca77cb11cff01fc2ad4c0 215 PIRSF PIRSF006755 3 213 3.4E-57 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDG60_04930 efe46226ddeca77cb11cff01fc2ad4c0 215 Gene3D G3DSA:3.40.50.300 1 207 3.8E-54 T 23-10-2018 CDG60_04930 efe46226ddeca77cb11cff01fc2ad4c0 215 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 206 25.24 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDG60_04930 efe46226ddeca77cb11cff01fc2ad4c0 215 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 176 3.8E-48 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDG60_04930 efe46226ddeca77cb11cff01fc2ad4c0 215 Pfam PF13500 AAA domain 6 180 1.2E-32 T 23-10-2018 CDG60_09870 a3cc81cda88d5310e5673ecdc35c5e09 180 Gene3D G3DSA:1.10.530.10 53 180 7.8E-27 T 23-10-2018 CDG60_09870 a3cc81cda88d5310e5673ecdc35c5e09 180 SUPERFAMILY SSF53955 43 178 8.44E-30 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_09870 a3cc81cda88d5310e5673ecdc35c5e09 180 Pfam PF01464 Transglycosylase SLT domain 62 164 5.9E-18 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_02680 5936c5ecc2cb7f6f588685b2f0ded97d 407 Pfam PF01544 CorA-like Mg2+ transporter protein 27 358 1.1E-39 T 23-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CDG60_02680 5936c5ecc2cb7f6f588685b2f0ded97d 407 SUPERFAMILY SSF143865 18 296 1.44E-16 T 23-10-2018 CDG60_02680 5936c5ecc2cb7f6f588685b2f0ded97d 407 Gene3D G3DSA:1.20.58.340 167 303 1.1E-6 T 23-10-2018 CDG60_02680 5936c5ecc2cb7f6f588685b2f0ded97d 407 SUPERFAMILY SSF144083 297 359 3.79E-19 T 23-10-2018 CDG60_02680 5936c5ecc2cb7f6f588685b2f0ded97d 407 Gene3D G3DSA:1.20.58.340 305 361 9.2E-19 T 23-10-2018 CDG60_08885 a1b1d79d2ca0d77230d48e6e5510cfb8 138 SUPERFAMILY SSF51230 65 135 5.63E-21 T 23-10-2018 IPR011053 Single hybrid motif CDG60_08885 a1b1d79d2ca0d77230d48e6e5510cfb8 138 Gene3D G3DSA:2.40.50.100 61 135 7.2E-27 T 23-10-2018 CDG60_08885 a1b1d79d2ca0d77230d48e6e5510cfb8 138 Pfam PF00364 Biotin-requiring enzyme 65 135 8.7E-20 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG60_08885 a1b1d79d2ca0d77230d48e6e5510cfb8 138 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 66 79 1.3E-14 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDG60_08885 a1b1d79d2ca0d77230d48e6e5510cfb8 138 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 97 1.3E-14 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDG60_08885 a1b1d79d2ca0d77230d48e6e5510cfb8 138 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 111 1.3E-14 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDG60_06650 719bebbde519cec8d9854dd198f638be 428 SUPERFAMILY SSF69304 153 427 8.37E-52 T 23-10-2018 CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Pfam PF04052 TolB amino-terminal domain 31 125 4.0E-21 T 23-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CDG60_06650 719bebbde519cec8d9854dd198f638be 428 SUPERFAMILY SSF52964 38 158 2.75E-29 T 23-10-2018 CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Gene3D G3DSA:3.40.50.10070 26 161 2.6E-33 T 23-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Pfam PF07676 WD40-like Beta Propeller Repeat 201 226 0.0036 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Pfam PF07676 WD40-like Beta Propeller Repeat 371 395 0.0015 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Pfam PF07676 WD40-like Beta Propeller Repeat 237 269 2.8E-6 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Pfam PF07676 WD40-like Beta Propeller Repeat 278 314 2.9E-10 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 10 425 42.084 T 23-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CDG60_06650 719bebbde519cec8d9854dd198f638be 428 Gene3D G3DSA:2.120.10.30 162 428 1.4E-80 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG60_06650 719bebbde519cec8d9854dd198f638be 428 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 22 425 1.5E-149 T 23-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.9E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 SUPERFAMILY SSF54523 8 148 2.2E-26 T 23-10-2018 CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 2.7E-11 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 1.6E-11 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.6E-11 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 Pfam PF00114 Pilin (bacterial filament) 36 149 1.0E-21 T 23-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CDG60_16610 f6a09feb0d6e6b0b7a20c6ae1db1b0f3 161 Gene3D G3DSA:3.30.700.10 8 150 5.8E-35 T 23-10-2018 CDG60_16825 b0182f7a9dd3494f9e9cfbc9ba0222b0 332 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 50 62 - T 23-10-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CDG60_16825 b0182f7a9dd3494f9e9cfbc9ba0222b0 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 24 328 8.1E-138 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDG60_16825 b0182f7a9dd3494f9e9cfbc9ba0222b0 332 Pfam PF13531 Bacterial extracellular solute-binding protein 47 282 2.4E-43 T 23-10-2018 CDG60_16825 b0182f7a9dd3494f9e9cfbc9ba0222b0 332 Gene3D G3DSA:3.40.190.10 29 297 6.5E-131 T 23-10-2018 CDG60_16825 b0182f7a9dd3494f9e9cfbc9ba0222b0 332 Gene3D G3DSA:3.40.190.10 116 327 6.5E-131 T 23-10-2018 CDG60_16825 b0182f7a9dd3494f9e9cfbc9ba0222b0 332 SUPERFAMILY SSF53850 23 328 2.18E-84 T 23-10-2018 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 Gene3D G3DSA:2.40.30.10 29 127 1.9E-14 T 23-10-2018 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 Gene3D G3DSA:3.40.50.80 128 252 2.7E-21 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 SUPERFAMILY SSF54292 243 339 3.54E-14 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 SUPERFAMILY SSF63380 24 131 2.15E-20 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 Pfam PF00175 Oxidoreductase NAD-binding domain 138 231 2.9E-7 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 Gene3D G3DSA:3.10.20.30 253 340 2.3E-10 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 63 75 5.4E-5 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 131 5.4E-5 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 156 5.4E-5 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 SUPERFAMILY SSF52343 118 242 3.27E-21 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 311 1.7E-4 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG60_01005 8a8d6b3c9322b5ab135fbf98649935d7 340 Pfam PF00970 Oxidoreductase FAD-binding domain 35 127 7.9E-10 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_10770 2df95c49979dc1945d1f21ad40d6ee82 389 SUPERFAMILY SSF53383 2 389 4.35E-92 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_10770 2df95c49979dc1945d1f21ad40d6ee82 389 Gene3D G3DSA:3.90.1150.10 13 379 3.1E-122 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_10770 2df95c49979dc1945d1f21ad40d6ee82 389 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 388 9.9E-200 T 23-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 CDG60_10770 2df95c49979dc1945d1f21ad40d6ee82 389 Pfam PF00155 Aminotransferase class I and II 30 385 2.5E-50 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_10770 2df95c49979dc1945d1f21ad40d6ee82 389 Gene3D G3DSA:3.40.640.10 42 287 3.1E-122 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_14485 0080137f2f58770522299e20f0688f27 300 Pfam PF00701 Dihydrodipicolinate synthetase family 3 286 1.2E-61 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_14485 0080137f2f58770522299e20f0688f27 300 Gene3D G3DSA:3.20.20.70 1 290 7.6E-95 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_14485 0080137f2f58770522299e20f0688f27 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 3.1E-12 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_14485 0080137f2f58770522299e20f0688f27 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 3.1E-12 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_14485 0080137f2f58770522299e20f0688f27 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 3.1E-12 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_14485 0080137f2f58770522299e20f0688f27 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 3.1E-12 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_14485 0080137f2f58770522299e20f0688f27 300 PIRSF PIRSF001365 1 294 8.8E-77 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_14485 0080137f2f58770522299e20f0688f27 300 SMART SM01130 2 296 6.0E-90 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG60_14485 0080137f2f58770522299e20f0688f27 300 SUPERFAMILY SSF51569 1 289 5.55E-80 T 23-10-2018 CDG60_01150 1d65c985c73e6f1159cdf06fadc304b4 340 Gene3D G3DSA:3.40.50.720 4 275 4.9E-134 T 23-10-2018 CDG60_01150 1d65c985c73e6f1159cdf06fadc304b4 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 263 6.6E-56 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG60_01150 1d65c985c73e6f1159cdf06fadc304b4 340 Gene3D G3DSA:3.90.25.10 195 330 4.9E-134 T 23-10-2018 CDG60_01150 1d65c985c73e6f1159cdf06fadc304b4 340 SUPERFAMILY SSF51735 1 338 1.52E-95 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01150 1d65c985c73e6f1159cdf06fadc304b4 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 1.9E-132 T 23-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CDG60_02710 dc6211f191bbc2151d5b25a09cf44543 145 Gene3D G3DSA:2.40.128.520 16 145 2.5E-13 T 23-10-2018 CDG60_02710 dc6211f191bbc2151d5b25a09cf44543 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 21 142 4.4E-21 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_17005 3e10716cd04d9ac440c61eabab1e1e2d 315 Hamap MF_00301 Homoserine kinase [thrB]. 1 315 90.262 T 23-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CDG60_17005 3e10716cd04d9ac440c61eabab1e1e2d 315 Gene3D G3DSA:3.30.200.20 1 100 4.7E-22 T 23-10-2018 CDG60_17005 3e10716cd04d9ac440c61eabab1e1e2d 315 SUPERFAMILY SSF56112 5 312 1.18E-54 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_17005 3e10716cd04d9ac440c61eabab1e1e2d 315 Gene3D G3DSA:3.90.1200.10 103 313 6.8E-51 T 23-10-2018 CDG60_17005 3e10716cd04d9ac440c61eabab1e1e2d 315 Pfam PF01636 Phosphotransferase enzyme family 28 253 1.1E-20 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG60_14705 13d4a69ee58cd1a6c5a6a109d46a8b9d 93 Gene3D G3DSA:3.10.50.40 1 91 4.8E-32 T 23-10-2018 CDG60_14705 13d4a69ee58cd1a6c5a6a109d46a8b9d 93 SUPERFAMILY SSF54534 3 87 5.76E-28 T 23-10-2018 CDG60_14705 13d4a69ee58cd1a6c5a6a109d46a8b9d 93 Pfam PF00639 PPIC-type PPIASE domain 14 88 1.0E-19 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CDG60_00995 81d966c8bef3db5457ba15ee39395f41 205 SUPERFAMILY SSF52833 24 185 5.68E-42 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_00995 81d966c8bef3db5457ba15ee39395f41 205 Pfam PF01323 DSBA-like thioredoxin domain 91 187 1.8E-14 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG60_00995 81d966c8bef3db5457ba15ee39395f41 205 PIRSF PIRSF001488 1 205 2.1E-52 T 23-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CDG60_00995 81d966c8bef3db5457ba15ee39395f41 205 Gene3D G3DSA:3.40.30.10 25 205 3.1E-51 T 23-10-2018 CDG60_12700 83f5af149d68a186c51094d87056b011 300 SUPERFAMILY SSF53474 66 296 3.6E-52 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_12700 83f5af149d68a186c51094d87056b011 300 Pfam PF07859 alpha/beta hydrolase fold 75 276 4.7E-55 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG60_12700 83f5af149d68a186c51094d87056b011 300 Gene3D G3DSA:3.40.50.1820 42 299 1.3E-78 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 Gene3D G3DSA:3.90.45.10 1 160 1.2E-52 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 SUPERFAMILY SSF56420 4 159 1.1E-50 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 Hamap MF_00163 Peptide deformylase [def]. 3 161 24.242 T 23-10-2018 IPR023635 Peptide deformylase CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 Pfam PF01327 Polypeptide deformylase 6 159 2.4E-44 T 23-10-2018 IPR023635 Peptide deformylase CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 PRINTS PR01576 Peptide deformylase signature 37 66 4.0E-30 T 23-10-2018 IPR023635 Peptide deformylase CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 PRINTS PR01576 Peptide deformylase signature 101 112 4.0E-30 T 23-10-2018 IPR023635 Peptide deformylase CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 PRINTS PR01576 Peptide deformylase signature 132 161 4.0E-30 T 23-10-2018 IPR023635 Peptide deformylase CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 PRINTS PR01576 Peptide deformylase signature 113 131 4.0E-30 T 23-10-2018 IPR023635 Peptide deformylase CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 32 158 4.9E-39 T 23-10-2018 IPR023635 Peptide deformylase CDG60_13330 ee2a2da0d0e09445d4787a3f66e16c61 161 PIRSF PIRSF004749 1 160 1.0E-46 T 23-10-2018 IPR023635 Peptide deformylase CDG60_08670 8e591ebfcc1b6174ff85622dd14c00a8 221 SUPERFAMILY SSF50789 23 151 1.11E-6 T 23-10-2018 CDG60_08670 8e591ebfcc1b6174ff85622dd14c00a8 221 Pfam PF04586 Caudovirus prohead serine protease 11 160 5.0E-37 T 23-10-2018 IPR006433 Prohead protease CDG60_08670 8e591ebfcc1b6174ff85622dd14c00a8 221 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 19 157 2.4E-46 T 23-10-2018 IPR006433 Prohead protease CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 SUPERFAMILY SSF69742 1 153 5.49E-45 T 23-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 SUPERFAMILY SSF51735 159 315 4.77E-30 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 SUPERFAMILY SSF69075 317 414 1.31E-19 T 23-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 Gene3D G3DSA:3.40.50.720 157 313 3.7E-40 T 23-10-2018 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 PIRSF PIRSF000445 1 427 2.5E-140 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 23-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 3.0E-46 T 23-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 416 3.3E-118 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 28.159 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 Gene3D G3DSA:3.30.460.30 2 154 9.4E-53 T 23-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 167 306 2.7E-39 T 23-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDG60_05455 e0ffdaa622e5c3044274ec3cc41e38c6 427 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 409 6.8E-15 T 23-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 Pfam PF00394 Multicopper oxidase 159 330 5.2E-26 T 23-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 Gene3D G3DSA:2.60.40.420 10 144 1.2E-36 T 23-10-2018 IPR008972 Cupredoxin CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 Pfam PF07732 Multicopper oxidase 34 146 2.3E-34 T 23-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 Pfam PF07731 Multicopper oxidase 457 566 1.4E-25 T 23-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 ProSitePatterns PS00079 Multicopper oxidases signature 1. 543 563 - T 23-10-2018 IPR033138 Multicopper oxidases, conserved site CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 Gene3D G3DSA:2.60.40.420 155 363 9.6E-36 T 23-10-2018 IPR008972 Cupredoxin CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 SUPERFAMILY SSF49503 423 565 2.11E-34 T 23-10-2018 IPR008972 Cupredoxin CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 SUPERFAMILY SSF49503 22 174 2.44E-34 T 23-10-2018 IPR008972 Cupredoxin CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 25 565 4.5E-189 T 23-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 Gene3D G3DSA:2.60.40.420 423 579 5.8E-32 T 23-10-2018 IPR008972 Cupredoxin CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 SUPERFAMILY SSF49503 156 359 2.09E-40 T 23-10-2018 IPR008972 Cupredoxin CDG60_04430 d9dc4ab15b24912057cfd39b4eea164a 603 ProSitePatterns PS00080 Multicopper oxidases signature 2. 548 559 - T 23-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 Gene3D G3DSA:3.50.50.60 159 277 4.1E-88 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 SUPERFAMILY SSF51905 14 327 2.47E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 SUPERFAMILY SSF55424 352 468 5.67E-29 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 461 1.9E-27 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 334 5.1E-57 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 6.9E-27 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 6.9E-27 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 6.9E-27 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.9E-27 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 6.9E-27 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 64 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 2.6E-50 T 23-10-2018 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 Gene3D G3DSA:3.50.50.60 15 337 4.1E-88 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 Gene3D G3DSA:3.30.390.30 352 470 3.3E-31 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_12540 66ad20d1854b24810f9fba2dd51fafb2 471 PIRSF PIRSF000350 2 468 8.3E-66 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG60_12130 04e4f506553ac907a56fba0380286e37 232 SMART SM00479 2 170 5.2E-4 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_12130 04e4f506553ac907a56fba0380286e37 232 SUPERFAMILY SSF53098 3 194 1.52E-21 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_12130 04e4f506553ac907a56fba0380286e37 232 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 188 214 2.4E-5 T 23-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CDG60_12130 04e4f506553ac907a56fba0380286e37 232 Gene3D G3DSA:3.30.420.10 3 184 5.4E-20 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 SUPERFAMILY SSF52540 22 190 5.74E-6 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Gene3D G3DSA:3.30.565.10 731 877 2.5E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 873 2.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 801 815 2.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 853 2.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 829 2.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Gene3D G3DSA:1.20.120.620 388 493 3.4E-17 T 23-10-2018 IPR038318 KdpD, transmembrane domain superfamily CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 SUPERFAMILY SSF47384 647 719 2.16E-15 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Gene3D G3DSA:3.30.450.40 504 642 1.3E-19 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 768 874 3.7E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 227 2.6E-91 T 23-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Gene3D G3DSA:3.40.50.300 19 228 1.1E-94 T 23-10-2018 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 SMART SM00387 763 876 2.0E-29 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Pfam PF13493 Domain of unknown function (DUF4118) 395 494 2.0E-17 T 23-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 SUPERFAMILY SSF55874 709 874 1.28E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Gene3D G3DSA:1.10.287.130 645 718 4.2E-17 T 23-10-2018 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 Pfam PF00512 His Kinase A (phospho-acceptor) domain 652 718 4.7E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_07465 37bf87557e47dbcc5940c9a58a9bd120 878 SMART SM00388 651 719 1.4E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Gene3D G3DSA:3.40.50.300 345 542 1.6E-64 T 23-10-2018 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 291 303 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 316 7.3E-13 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 SUPERFAMILY SSF52540 157 543 7.4E-97 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 843 1.3E-25 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 4.2E-6 T 23-10-2018 IPR004176 Clp, N-terminal CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 142 2.7E-9 T 23-10-2018 IPR004176 Clp, N-terminal CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 SUPERFAMILY SSF81923 4 153 9.81E-35 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 SMART SM01086 764 853 8.9E-36 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 SMART SM00382 595 741 1.6E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 SMART SM00382 195 340 2.3E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 23-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Gene3D G3DSA:3.40.50.300 548 762 1.1E-85 T 23-10-2018 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 SUPERFAMILY SSF52540 544 853 4.33E-81 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 23-10-2018 IPR028299 ClpA/B, conserved site 2 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Gene3D G3DSA:1.10.1780.10 1 147 4.3E-27 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 3.1E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 3.1E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 3.1E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 3.1E-42 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Gene3D G3DSA:1.10.8.60 764 857 1.3E-27 T 23-10-2018 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 757 2.3E-53 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_10920 9ca456cdebad8c0e2f016e88aeb16756 859 Gene3D G3DSA:3.40.50.300 155 344 2.3E-74 T 23-10-2018 CDG60_05710 dd89c106a6021c776245df5057fe36ac 110 SUPERFAMILY SSF46767 11 94 8.24E-22 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDG60_05710 dd89c106a6021c776245df5057fe36ac 110 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 15 93 1.0E-20 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG60_05710 dd89c106a6021c776245df5057fe36ac 110 Gene3D G3DSA:1.10.10.10 10 110 1.4E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 Gene3D G3DSA:3.40.50.620 21 295 1.6E-97 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 21 301 37.846 T 23-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 Gene3D G3DSA:3.40.50.620 96 232 1.6E-97 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 200 208 1.3E-14 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 53 66 1.3E-14 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 194 1.3E-14 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 36 1.3E-14 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 22 251 5.3E-46 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 21 272 1.7E-102 T 23-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CDG60_02080 7a9f77539da83aebbe78cafe71ed8903 305 SUPERFAMILY SSF52374 21 295 2.95E-77 T 23-10-2018 CDG60_01655 63b657076d31077dcc0b15d8d119ca9c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 74 7.8E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01655 63b657076d31077dcc0b15d8d119ca9c 215 Gene3D G3DSA:1.10.10.60 17 85 1.0E-24 T 23-10-2018 CDG60_01655 63b657076d31077dcc0b15d8d119ca9c 215 SUPERFAMILY SSF48498 98 211 8.16E-26 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_01655 63b657076d31077dcc0b15d8d119ca9c 215 Gene3D G3DSA:1.10.357.10 89 213 1.2E-27 T 23-10-2018 CDG60_01655 63b657076d31077dcc0b15d8d119ca9c 215 SUPERFAMILY SSF46689 18 90 2.1E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_06155 d8c2dd7faf8cf91d017df0f5e565e62b 274 Pfam PF00589 Phage integrase family 99 259 1.3E-29 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_06155 d8c2dd7faf8cf91d017df0f5e565e62b 274 Gene3D G3DSA:1.10.150.130 18 97 6.0E-6 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_06155 d8c2dd7faf8cf91d017df0f5e565e62b 274 Gene3D G3DSA:1.10.443.10 98 271 6.8E-39 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_06155 d8c2dd7faf8cf91d017df0f5e565e62b 274 SUPERFAMILY SSF56349 31 266 3.53E-51 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 Hamap MF_01201 Alanine racemase. 2 365 30.916 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 SMART SM01005 237 365 4.8E-56 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 Pfam PF00842 Alanine racemase, C-terminal domain 238 361 2.9E-38 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 Gene3D G3DSA:3.20.20.10 11 220 3.9E-105 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 121 133 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 155 166 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 347 360 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 61 79 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 270 285 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 253 268 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 27 43 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 290 307 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 PRINTS PR00992 Alanine racemase signature 195 222 4.3E-53 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 SUPERFAMILY SSF50621 232 364 5.23E-40 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 Gene3D G3DSA:2.40.37.10 9 360 3.9E-105 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 SUPERFAMILY SSF51419 9 238 2.62E-59 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 23-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 Pfam PF01168 Alanine racemase, N-terminal domain 9 222 4.1E-61 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04490 524465adb71354ea4f62d0f75f28e1fc 366 TIGRFAM TIGR00492 alr: alanine racemase 4 363 9.9E-105 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_02995 b526617c337175129fb2242c9e90d3a4 172 Pfam PF00866 Ring hydroxylating beta subunit 18 163 4.2E-47 T 23-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 CDG60_02995 b526617c337175129fb2242c9e90d3a4 172 Gene3D G3DSA:3.10.450.50 1 172 1.7E-58 T 23-10-2018 CDG60_02995 b526617c337175129fb2242c9e90d3a4 172 SUPERFAMILY SSF54427 4 172 5.68E-45 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 SUPERFAMILY SSF54719 90 200 8.12E-42 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 Gene3D G3DSA:1.10.287.990 21 88 2.4E-26 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 1.1E-33 T 23-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 SUPERFAMILY SSF46609 3 88 2.49E-35 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 1.4E-36 T 23-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 Gene3D G3DSA:2.40.500.20 92 207 1.9E-41 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 PIRSF PIRSF000349 1 207 2.8E-80 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_12840 1e15e35440f45015836b8ee4da702e7b 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 23-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG60_04105 ddd7946c4d40368312ef838297e73679 410 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 394 6.6E-37 T 23-10-2018 IPR000160 GGDEF domain CDG60_04105 ddd7946c4d40368312ef838297e73679 410 SUPERFAMILY SSF55073 250 399 7.85E-41 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_04105 ddd7946c4d40368312ef838297e73679 410 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 394 5.9E-44 T 23-10-2018 IPR000160 GGDEF domain CDG60_04105 ddd7946c4d40368312ef838297e73679 410 Pfam PF17152 Periplasmic sensor domain 42 141 3.4E-12 T 23-10-2018 IPR033417 Periplasmic sensor domain CHASE8 CDG60_04105 ddd7946c4d40368312ef838297e73679 410 Gene3D G3DSA:3.30.70.270 229 401 5.9E-48 T 23-10-2018 CDG60_04105 ddd7946c4d40368312ef838297e73679 410 SMART SM00267 234 402 6.2E-53 T 23-10-2018 IPR000160 GGDEF domain CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 Gene3D G3DSA:1.10.940.10 8 142 4.2E-34 T 23-10-2018 IPR035926 NusB-like superfamily CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 18 434 1.1E-105 T 23-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 Pfam PF01029 NusB family 13 130 2.6E-18 T 23-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 SUPERFAMILY SSF48013 12 149 4.97E-28 T 23-10-2018 IPR035926 NusB-like superfamily CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 3.8E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 416 433 3.8E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 318 330 3.8E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 3.8E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 368 384 3.8E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 Gene3D G3DSA:3.40.50.150 143 433 2.1E-72 T 23-10-2018 CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 431 2.8E-49 T 23-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 CDG60_17850 e0797f28fb2549bbbb983f2cd8158633 435 SUPERFAMILY SSF53335 143 433 2.52E-64 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_09905 9282e46493b5c889879e9467e3007400 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 25 219 1.7E-27 T 23-10-2018 IPR018635 Uncharacterised protein family UPF0319 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 3.5E-254 T 23-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 40.415 T 23-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 Gene3D G3DSA:3.60.20.10 2 238 3.9E-78 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 Gene3D G3DSA:3.40.50.10490 247 611 1.4E-142 T 23-10-2018 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 SUPERFAMILY SSF53697 244 612 1.39E-107 T 23-10-2018 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 SUPERFAMILY SSF56235 2 222 3.09E-71 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 Gene3D G3DSA:3.40.50.10490 450 597 1.4E-142 T 23-10-2018 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 Pfam PF13522 Glutamine amidotransferase domain 65 181 1.1E-21 T 23-10-2018 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 Pfam PF01380 SIS domain 464 594 1.6E-26 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDG60_01340 6b3cf72857c446c56cb85d108bf0fcb8 612 Pfam PF01380 SIS domain 288 420 9.5E-27 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDG60_03670 c6791a533646157dcf29219678f955a5 289 SUPERFAMILY SSF48179 163 287 3.15E-28 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_03670 c6791a533646157dcf29219678f955a5 289 SUPERFAMILY SSF51735 7 163 2.32E-40 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03670 c6791a533646157dcf29219678f955a5 289 Gene3D G3DSA:1.10.1040.10 165 289 2.0E-31 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG60_03670 c6791a533646157dcf29219678f955a5 289 PIRSF PIRSF000103 1 289 8.6E-62 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG60_03670 c6791a533646157dcf29219678f955a5 289 Gene3D G3DSA:3.40.50.720 2 164 1.8E-41 T 23-10-2018 CDG60_03670 c6791a533646157dcf29219678f955a5 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 1.1E-22 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDG60_03670 c6791a533646157dcf29219678f955a5 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 162 5.1E-42 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDG60_00985 797380e290209f6b27c0b1e3b8934829 228 Gene3D G3DSA:1.10.150.240 16 84 8.6E-52 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG60_00985 797380e290209f6b27c0b1e3b8934829 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 184 2.1E-36 T 23-10-2018 CDG60_00985 797380e290209f6b27c0b1e3b8934829 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 80 179 2.4E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_00985 797380e290209f6b27c0b1e3b8934829 228 SUPERFAMILY SSF56784 1 220 1.25E-54 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_00985 797380e290209f6b27c0b1e3b8934829 228 Gene3D G3DSA:3.40.50.1000 4 191 8.6E-52 T 23-10-2018 IPR023214 HAD superfamily CDG60_00985 797380e290209f6b27c0b1e3b8934829 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 184 8.5E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_14365 a69fbc781e4aa018750bd7d39a76d94a 216 Gene3D G3DSA:3.40.1080.10 4 215 3.7E-84 T 23-10-2018 CDG60_14365 a69fbc781e4aa018750bd7d39a76d94a 216 SMART SM00882 9 206 1.7E-62 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG60_14365 a69fbc781e4aa018750bd7d39a76d94a 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 23-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CDG60_14365 a69fbc781e4aa018750bd7d39a76d94a 216 SUPERFAMILY SSF100950 8 212 5.09E-64 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_14365 a69fbc781e4aa018750bd7d39a76d94a 216 Pfam PF01144 Coenzyme A transferase 9 203 2.3E-40 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG60_14365 a69fbc781e4aa018750bd7d39a76d94a 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 5.4E-88 T 23-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CDG60_09995 413bd2498b6481f3f034f2856f348361 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 98 20.932 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG60_09995 413bd2498b6481f3f034f2856f348361 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 105 4.8E-24 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG60_09995 413bd2498b6481f3f034f2856f348361 109 SUPERFAMILY SSF82607 7 103 7.32E-29 T 23-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDG60_09995 413bd2498b6481f3f034f2856f348361 109 Pfam PF02575 YbaB/EbfC DNA-binding family 7 99 2.3E-29 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG60_09995 413bd2498b6481f3f034f2856f348361 109 PIRSF PIRSF004555 1 109 2.8E-31 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG60_09995 413bd2498b6481f3f034f2856f348361 109 Gene3D G3DSA:3.30.1310.10 1 109 3.0E-34 T 23-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 PRINTS PR00169 Potassium channel signature 130 156 5.2E-32 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 PRINTS PR00169 Potassium channel signature 190 212 5.2E-32 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 PRINTS PR00169 Potassium channel signature 219 245 5.2E-32 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 PRINTS PR00169 Potassium channel signature 63 86 5.2E-32 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 PRINTS PR00169 Potassium channel signature 21 49 5.2E-32 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 PRINTS PR00169 Potassium channel signature 159 182 5.2E-32 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 SUPERFAMILY SSF81324 25 246 1.96E-51 T 23-10-2018 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 Pfam PF00520 Ion transport protein 28 246 1.6E-29 T 23-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CDG60_10505 986e8260a9b80a15cb5fc04df50fd030 327 Gene3D G3DSA:1.10.287.70 27 249 1.2E-56 T 23-10-2018 CDG60_16920 d245d80fa248203321eee82c2979c904 509 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 215 2.8E-30 T 23-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CDG60_16920 d245d80fa248203321eee82c2979c904 509 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 321 464 1.2E-41 T 23-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDG60_16920 d245d80fa248203321eee82c2979c904 509 Gene3D G3DSA:3.30.750.70 228 326 4.2E-6 T 23-10-2018 CDG60_16920 d245d80fa248203321eee82c2979c904 509 Gene3D G3DSA:3.40.1080.10 13 184 9.9E-17 T 23-10-2018 CDG60_16920 d245d80fa248203321eee82c2979c904 509 SUPERFAMILY SSF100950 4 218 3.05E-76 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_16920 d245d80fa248203321eee82c2979c904 509 Gene3D G3DSA:3.40.1080.20 337 477 6.0E-39 T 23-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDG60_16920 d245d80fa248203321eee82c2979c904 509 SUPERFAMILY SSF100950 227 495 8.38E-83 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_16920 d245d80fa248203321eee82c2979c904 509 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 495 2.2E-233 T 23-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 CDG60_10560 c556706324d79b033d77ec8f19dd1c02 198 SUPERFAMILY SSF52833 3 196 9.23E-46 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_10560 c556706324d79b033d77ec8f19dd1c02 198 Gene3D G3DSA:3.40.30.10 3 198 7.2E-62 T 23-10-2018 CDG60_10560 c556706324d79b033d77ec8f19dd1c02 198 Pfam PF01323 DSBA-like thioredoxin domain 3 195 8.7E-43 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG60_10560 c556706324d79b033d77ec8f19dd1c02 198 PIRSF PIRSF006386 1 198 9.8E-59 T 23-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG60_02365 9e7f5baa699336fa23d5c9e626ae468b 304 SUPERFAMILY SSF51197 100 222 3.57E-17 T 23-10-2018 CDG60_02365 9e7f5baa699336fa23d5c9e626ae468b 304 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 7.1E-47 T 23-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 CDG60_02365 9e7f5baa699336fa23d5c9e626ae468b 304 Gene3D G3DSA:2.60.120.330 44 231 7.7E-43 T 23-10-2018 IPR027443 Isopenicillin N synthase-like CDG60_15020 7505520afcb510af9db2ab2d3d8c4bd9 243 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 67 119 6.0E-5 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG60_15020 7505520afcb510af9db2ab2d3d8c4bd9 243 Pfam PF13103 TonB C terminal 172 220 1.4E-4 T 23-10-2018 CDG60_15020 7505520afcb510af9db2ab2d3d8c4bd9 243 SUPERFAMILY SSF74653 154 216 6.15E-7 T 23-10-2018 CDG60_15020 7505520afcb510af9db2ab2d3d8c4bd9 243 SUPERFAMILY SSF74653 43 127 2.49E-9 T 23-10-2018 CDG60_15020 7505520afcb510af9db2ab2d3d8c4bd9 243 Gene3D G3DSA:3.30.1150.10 147 237 9.1E-6 T 23-10-2018 CDG60_15020 7505520afcb510af9db2ab2d3d8c4bd9 243 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 176 221 8.6E-7 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG60_15020 7505520afcb510af9db2ab2d3d8c4bd9 243 Gene3D G3DSA:3.30.1150.10 34 126 4.3E-5 T 23-10-2018 CDG60_03160 b89e18c3a0685e2d7584251a80b89104 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 6.7E-156 T 23-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CDG60_03160 b89e18c3a0685e2d7584251a80b89104 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.533 T 23-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CDG60_03160 b89e18c3a0685e2d7584251a80b89104 359 SMART SM01329 4 354 2.0E-197 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG60_03160 b89e18c3a0685e2d7584251a80b89104 359 Gene3D G3DSA:3.40.718.10 2 359 3.4E-145 T 23-10-2018 CDG60_03160 b89e18c3a0685e2d7584251a80b89104 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 2.3E-136 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG60_03160 b89e18c3a0685e2d7584251a80b89104 359 SUPERFAMILY SSF53659 1 358 2.34E-120 T 23-10-2018 CDG60_03160 b89e18c3a0685e2d7584251a80b89104 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.2E-22 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.2E-22 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.2E-22 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 Gene3D G3DSA:3.30.860.10 1 91 8.8E-39 T 23-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 SUPERFAMILY SSF54570 3 84 9.55E-34 T 23-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.6E-43 T 23-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 PIRSF PIRSF002144 1 91 7.4E-31 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 Pfam PF00203 Ribosomal protein S19 3 83 1.1E-34 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15970 5cdb93806056dc339adcf64e9aa7920e 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.564 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_10395 a557d2fd16ee7b140a457a86c376012a 260 PIRSF PIRSF009320 85 260 1.7E-9 T 23-10-2018 CDG60_10395 a557d2fd16ee7b140a457a86c376012a 260 PIRSF PIRSF009320 2 84 7.5E-16 T 23-10-2018 CDG60_10395 a557d2fd16ee7b140a457a86c376012a 260 Gene3D G3DSA:3.40.50.300 1 259 6.8E-79 T 23-10-2018 CDG60_10395 a557d2fd16ee7b140a457a86c376012a 260 Pfam PF13614 AAA domain 3 177 2.5E-60 T 23-10-2018 IPR025669 AAA domain CDG60_10395 a557d2fd16ee7b140a457a86c376012a 260 SUPERFAMILY SSF52540 1 252 2.66E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_05120 fc07ca65b9bf9bfae518d1d44ccd7ce9 371 PRINTS PR00184 Neisseria sp. porin signature 52 77 2.6E-5 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDG60_05120 fc07ca65b9bf9bfae518d1d44ccd7ce9 371 PRINTS PR00184 Neisseria sp. porin signature 150 167 2.6E-5 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDG60_05120 fc07ca65b9bf9bfae518d1d44ccd7ce9 371 PRINTS PR00184 Neisseria sp. porin signature 325 349 2.6E-5 T 23-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 CDG60_05120 fc07ca65b9bf9bfae518d1d44ccd7ce9 371 SUPERFAMILY SSF56935 24 371 4.88E-46 T 23-10-2018 CDG60_05120 fc07ca65b9bf9bfae518d1d44ccd7ce9 371 Gene3D G3DSA:2.40.160.10 13 371 2.3E-52 T 23-10-2018 IPR023614 Porin domain superfamily CDG60_05120 fc07ca65b9bf9bfae518d1d44ccd7ce9 371 Pfam PF13609 Gram-negative porin 8 349 1.2E-34 T 23-10-2018 CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 1.6E-12 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 1.6E-12 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 1.6E-12 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 PIRSF PIRSF001467 1 169 1.8E-27 T 23-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 23-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 165 2.1E-48 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 SUPERFAMILY SSF50891 6 167 1.9E-57 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG60_07970 a0f944399e17ab0f1e9a32315cf961c6 169 Gene3D G3DSA:2.40.100.10 3 167 1.1E-65 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG60_10575 a9210ac6a7ce692d8b6903ed696ecbe8 237 SUPERFAMILY SSF52317 42 228 9.17E-45 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_10575 a9210ac6a7ce692d8b6903ed696ecbe8 237 Pfam PF00117 Glutamine amidotransferase class-I 21 181 3.0E-17 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG60_10575 a9210ac6a7ce692d8b6903ed696ecbe8 237 Gene3D G3DSA:3.40.50.880 2 230 6.2E-54 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_17745 70588d75056554df7d29da03f03c1295 478 SUPERFAMILY SSF53383 99 469 4.26E-81 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_17745 70588d75056554df7d29da03f03c1295 478 Gene3D G3DSA:3.90.1150.10 103 468 3.7E-83 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_17745 70588d75056554df7d29da03f03c1295 478 Gene3D G3DSA:1.10.10.10 2 79 3.8E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_17745 70588d75056554df7d29da03f03c1295 478 SUPERFAMILY SSF46785 5 77 5.94E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_17745 70588d75056554df7d29da03f03c1295 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 3.8E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_17745 70588d75056554df7d29da03f03c1295 478 SMART SM00345 8 67 1.5E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_17745 70588d75056554df7d29da03f03c1295 478 Pfam PF00155 Aminotransferase class I and II 123 451 8.6E-28 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_17745 70588d75056554df7d29da03f03c1295 478 Gene3D G3DSA:3.40.640.10 144 362 3.7E-83 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_09125 16dae5062250b816cb378f9e6f96d80b 617 Gene3D G3DSA:1.10.10.160 123 196 2.6E-27 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily CDG60_09125 16dae5062250b816cb378f9e6f96d80b 617 SUPERFAMILY SSF52540 29 595 1.02E-34 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09125 16dae5062250b816cb378f9e6f96d80b 617 Gene3D G3DSA:3.40.50.300 377 607 2.4E-5 T 23-10-2018 CDG60_09125 16dae5062250b816cb378f9e6f96d80b 617 Pfam PF13245 AAA domain 30 263 6.2E-13 T 23-10-2018 CDG60_09125 16dae5062250b816cb378f9e6f96d80b 617 Gene3D G3DSA:3.40.50.300 33 263 2.6E-27 T 23-10-2018 CDG60_16315 9de3710940cb44d3030e8ab1e407374c 699 Pfam PF12805 FUSC-like inner membrane protein yccS 51 329 2.6E-81 T 23-10-2018 IPR032692 Integral membrane protein YccS, N-terminal CDG60_16315 9de3710940cb44d3030e8ab1e407374c 699 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 2 691 1.0E-208 T 23-10-2018 IPR010019 Integral membrane protein, YccS CDG60_16315 9de3710940cb44d3030e8ab1e407374c 699 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 1 691 1.8E-199 T 23-10-2018 IPR010020 Integral membrane protein, YccS/YhfK CDG60_16315 9de3710940cb44d3030e8ab1e407374c 699 Pfam PF13515 Fusaric acid resistance protein-like 394 513 5.1E-21 T 23-10-2018 CDG60_12285 ac8dd5a9c4dd8f92e9956542f139a213 424 Pfam PF04860 Phage portal protein 49 376 7.3E-63 T 23-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CDG60_12285 ac8dd5a9c4dd8f92e9956542f139a213 424 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 41 382 1.3E-63 T 23-10-2018 IPR006427 Phage portal protein, HK97 CDG60_05480 281e66ab78827e874e45873fd6f3a7b9 183 SUPERFAMILY SSF52218 7 181 2.49E-50 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_05480 281e66ab78827e874e45873fd6f3a7b9 183 Pfam PF03358 NADPH-dependent FMN reductase 48 121 2.7E-16 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG60_05480 281e66ab78827e874e45873fd6f3a7b9 183 ProSitePatterns PS00201 Flavodoxin signature. 10 26 - T 23-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CDG60_05480 281e66ab78827e874e45873fd6f3a7b9 183 Gene3D G3DSA:3.40.50.360 3 183 6.9E-55 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_12270 6cacb736ce9f0358fd823dce445dc6e0 110 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 8 101 9.9E-15 T 23-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CDG60_12270 6cacb736ce9f0358fd823dce445dc6e0 110 Gene3D G3DSA:2.40.10.270 4 109 1.2E-24 T 23-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily CDG60_12270 6cacb736ce9f0358fd823dce445dc6e0 110 Pfam PF05521 Phage head-tail joining protein 9 104 1.5E-21 T 23-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CDG60_17570 b19e636ea9991e2e2bd05b18ab9ac148 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 423 5.0E-74 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_17570 b19e636ea9991e2e2bd05b18ab9ac148 454 Pfam PF01554 MatE 22 182 2.9E-31 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_17570 b19e636ea9991e2e2bd05b18ab9ac148 454 Pfam PF01554 MatE 251 412 1.3E-29 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_17570 b19e636ea9991e2e2bd05b18ab9ac148 454 PIRSF PIRSF006603 1 454 3.3E-103 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_16890 7381f3af0d7ca8ca40930c619ca8c98f 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 1.5E-203 T 23-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CDG60_16890 7381f3af0d7ca8ca40930c619ca8c98f 425 Gene3D G3DSA:3.90.1150.10 291 425 1.4E-54 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_16890 7381f3af0d7ca8ca40930c619ca8c98f 425 SUPERFAMILY SSF53383 4 422 3.09E-132 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_16890 7381f3af0d7ca8ca40930c619ca8c98f 425 Gene3D G3DSA:3.40.640.10 4 287 1.6E-103 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_16890 7381f3af0d7ca8ca40930c619ca8c98f 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 422 8.1E-148 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_16890 7381f3af0d7ca8ca40930c619ca8c98f 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_16890 7381f3af0d7ca8ca40930c619ca8c98f 425 PIRSF PIRSF001434 1 425 1.7E-137 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_03085 f581dfbfd1f9816b5c9c908320d2e631 558 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 188 287 2.9E-16 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_03085 f581dfbfd1f9816b5c9c908320d2e631 558 SUPERFAMILY SSF56645 58 304 6.2E-32 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_03085 f581dfbfd1f9816b5c9c908320d2e631 558 Gene3D G3DSA:2.40.110.20 138 297 8.6E-53 T 23-10-2018 CDG60_03085 f581dfbfd1f9816b5c9c908320d2e631 558 SUPERFAMILY SSF47203 295 452 1.08E-37 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_03085 f581dfbfd1f9816b5c9c908320d2e631 558 Gene3D G3DSA:1.20.140.10 298 452 1.5E-35 T 23-10-2018 CDG60_03085 f581dfbfd1f9816b5c9c908320d2e631 558 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 297 450 2.0E-32 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_04420 d315da4eb01acdf57bb5dedf966e0a0a 228 Gene3D G3DSA:3.20.20.70 6 223 9.0E-84 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_04420 d315da4eb01acdf57bb5dedf966e0a0a 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG60_04420 d315da4eb01acdf57bb5dedf966e0a0a 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG60_04420 d315da4eb01acdf57bb5dedf966e0a0a 228 SUPERFAMILY SSF51366 5 220 1.06E-75 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_04420 d315da4eb01acdf57bb5dedf966e0a0a 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 2.5E-97 T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG60_04420 d315da4eb01acdf57bb5dedf966e0a0a 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 8.5E-89 T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG60_04420 d315da4eb01acdf57bb5dedf966e0a0a 228 PIRSF PIRSF001461 1 227 1.3E-102 T 23-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 Pfam PF03466 LysR substrate binding domain 89 288 1.0E-35 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.2E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.2E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.2E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 SUPERFAMILY SSF46785 1 83 2.72E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 Gene3D G3DSA:3.40.190.10 162 267 2.6E-72 T 23-10-2018 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.6E-23 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 Gene3D G3DSA:3.40.190.10 93 292 2.6E-72 T 23-10-2018 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 SUPERFAMILY SSF53850 89 292 5.67E-33 T 23-10-2018 CDG60_08070 a5d9f14f304869bb0b2e92d82f61273e 304 Gene3D G3DSA:1.10.10.10 1 92 2.0E-33 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10265 2d1a7764bc7932aee7f58d30c3c34749 299 SUPERFAMILY SSF53850 90 296 1.15E-39 T 23-10-2018 CDG60_10265 2d1a7764bc7932aee7f58d30c3c34749 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.2E-12 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_10265 2d1a7764bc7932aee7f58d30c3c34749 299 Pfam PF03466 LysR substrate binding domain 90 296 3.2E-38 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_10265 2d1a7764bc7932aee7f58d30c3c34749 299 Gene3D G3DSA:3.40.190.10 92 294 2.8E-55 T 23-10-2018 CDG60_10265 2d1a7764bc7932aee7f58d30c3c34749 299 Gene3D G3DSA:3.40.190.10 166 267 2.8E-55 T 23-10-2018 CDG60_10265 2d1a7764bc7932aee7f58d30c3c34749 299 Gene3D G3DSA:1.10.10.10 3 90 9.8E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10265 2d1a7764bc7932aee7f58d30c3c34749 299 SUPERFAMILY SSF46785 4 86 1.74E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_00725 c28f1cac84aed9dc75e93b3e845005b7 180 Gene3D G3DSA:3.40.50.300 1 179 8.4E-47 T 23-10-2018 CDG60_00725 c28f1cac84aed9dc75e93b3e845005b7 180 Pfam PF13238 AAA domain 3 135 2.7E-9 T 23-10-2018 CDG60_00725 c28f1cac84aed9dc75e93b3e845005b7 180 SUPERFAMILY SSF52540 1 177 3.86E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10355 212ad71d69717c9482fdfbb2ab666d7f 113 Gene3D G3DSA:2.40.10.220 2 113 2.0E-33 T 23-10-2018 CDG60_10355 212ad71d69717c9482fdfbb2ab666d7f 113 Pfam PF07238 PilZ domain 9 83 4.0E-7 T 23-10-2018 IPR009875 PilZ domain GO:0035438 CDG60_10820 576fe0ae8973d2accc9d450bbfa33aab 386 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG60_10820 576fe0ae8973d2accc9d450bbfa33aab 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG60_10820 576fe0ae8973d2accc9d450bbfa33aab 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 376 8.7E-109 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG60_10820 576fe0ae8973d2accc9d450bbfa33aab 386 SUPERFAMILY SSF56796 2 385 4.84E-114 T 23-10-2018 CDG60_10820 576fe0ae8973d2accc9d450bbfa33aab 386 Gene3D G3DSA:3.40.50.1970 1 185 1.9E-52 T 23-10-2018 CDG60_10820 576fe0ae8973d2accc9d450bbfa33aab 386 Gene3D G3DSA:1.20.1090.10 186 384 3.1E-58 T 23-10-2018 CDG60_13975 01516f53f486bb52f1780dd5374ff2c2 429 SUPERFAMILY SSF56935 19 429 4.03E-46 T 23-10-2018 CDG60_13975 01516f53f486bb52f1780dd5374ff2c2 429 Gene3D G3DSA:2.40.160.60 16 429 1.8E-27 T 23-10-2018 CDG60_09530 9987e69fe9ab14f17e20996f393f3e24 105 SUPERFAMILY SSF47598 8 45 6.67E-13 T 23-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDG60_09530 9987e69fe9ab14f17e20996f393f3e24 105 Gene3D G3DSA:1.10.1220.10 2 49 1.9E-16 T 23-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDG60_09530 9987e69fe9ab14f17e20996f393f3e24 105 Pfam PF03869 Arc-like DNA binding domain 9 45 9.0E-11 T 23-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 Gene3D G3DSA:2.20.28.60 2 52 1.7E-23 T 23-10-2018 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 Pfam PF00285 Citrate synthase, C-terminal domain 48 411 1.8E-134 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 Gene3D G3DSA:1.10.580.10 59 411 3.8E-145 T 23-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 SUPERFAMILY SSF48256 6 422 1.19E-164 T 23-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 Gene3D G3DSA:1.10.230.10 271 377 3.8E-145 T 23-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 23-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 PIRSF PIRSF001369 40 425 1.1E-169 T 23-10-2018 IPR024176 Citrate synthase, bacterial-type CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 PRINTS PR00143 Citrate synthase signature 167 180 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 PRINTS PR00143 Citrate synthase signature 222 237 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 PRINTS PR00143 Citrate synthase signature 360 376 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 PRINTS PR00143 Citrate synthase signature 244 272 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 PRINTS PR00143 Citrate synthase signature 297 317 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 PRINTS PR00143 Citrate synthase signature 380 394 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG60_05575 830d5278f4e7f297f07f17c98be99b5d 425 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 1.2E-236 T 23-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CDG60_05775 b58a144dc094654bbdcd0528f4753006 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 279 1.9E-95 T 23-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CDG60_05775 b58a144dc094654bbdcd0528f4753006 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_05775 b58a144dc094654bbdcd0528f4753006 283 Pfam PF00809 Pterin binding enzyme 26 265 9.4E-81 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_05775 b58a144dc094654bbdcd0528f4753006 283 SUPERFAMILY SSF51717 13 282 4.19E-95 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_05775 b58a144dc094654bbdcd0528f4753006 283 Gene3D G3DSA:3.20.20.20 3 283 1.2E-109 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_05775 b58a144dc094654bbdcd0528f4753006 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Pfam PF13328 HD domain 68 214 4.6E-38 T 23-10-2018 IPR003607 HD/PDEase domain CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 SUPERFAMILY SSF109604 31 229 2.95E-44 T 23-10-2018 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 SUPERFAMILY SSF81271 433 493 2.4E-17 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Pfam PF04607 Region found in RelA / SpoT proteins 274 382 2.5E-34 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 SUPERFAMILY SSF55021 689 765 5.0E-13 T 23-10-2018 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Gene3D G3DSA:3.30.70.260 690 767 1.7E-17 T 23-10-2018 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 SUPERFAMILY SSF81301 231 388 5.89E-58 T 23-10-2018 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 77 762 6.5E-170 T 23-10-2018 IPR004811 RelA/SpoT family GO:0015969 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 SMART SM00954 274 383 4.8E-60 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Pfam PF02824 TGS domain 434 493 1.3E-17 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Pfam PF13291 ACT domain 689 763 1.8E-18 T 23-10-2018 IPR002912 ACT domain CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Gene3D G3DSA:3.30.460.10 232 363 2.1E-49 T 23-10-2018 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Gene3D G3DSA:1.10.3210.10 27 230 6.1E-42 T 23-10-2018 CDG60_03700 461215840e4ee64ca68792c8a67a4d02 768 Gene3D G3DSA:3.10.20.30 431 502 1.4E-27 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 Pfam PF00384 Molybdopterin oxidoreductase 566 627 1.5E-5 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 SUPERFAMILY SSF54862 82 213 1.42E-31 T 23-10-2018 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 SMART SM00929 88 128 1.8E-17 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 6.6E-14 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 SUPERFAMILY SSF50692 799 877 9.04E-8 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 9.6E-11 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 Gene3D G3DSA:2.20.25.90 221 275 4.7E-13 T 23-10-2018 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 SMART SM00926 221 275 6.8E-11 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 644 1.6E-200 T 23-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 SUPERFAMILY SSF54292 1 77 2.88E-19 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 SUPERFAMILY SSF53706 219 678 4.82E-78 T 23-10-2018 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 2.6E-11 T 23-10-2018 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 Gene3D G3DSA:3.40.50.740 497 678 1.8E-11 T 23-10-2018 CDG60_13855 64748dcc97aeb72f5e101bc8779c1513 893 Gene3D G3DSA:3.10.20.740 1 128 5.7E-29 T 23-10-2018 CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 Gene3D G3DSA:3.40.50.720 115 234 6.1E-76 T 23-10-2018 CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 SUPERFAMILY SSF51735 102 259 9.29E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 Gene3D G3DSA:3.40.50.10860 5 253 6.1E-76 T 23-10-2018 CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 7.4E-22 T 23-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 194 6.3E-13 T 23-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 260 29.104 T 23-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 SUPERFAMILY SSF53223 2 101 1.61E-29 T 23-10-2018 CDG60_16180 f7a4d187ecbbcc495923654a1a5e789f 262 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 259 2.1E-72 T 23-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 476 2.1E-223 T 23-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 Pfam PF00072 Response regulator receiver domain 6 115 7.6E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 Pfam PF02954 Bacterial regulatory protein, Fis family 438 476 3.8E-14 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 459 4.6E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 459 479 4.6E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 SUPERFAMILY SSF52172 1 187 1.57E-43 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 Gene3D G3DSA:3.40.50.300 127 313 8.4E-68 T 23-10-2018 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 Gene3D G3DSA:3.40.50.2300 1 124 1.1E-38 T 23-10-2018 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 Gene3D G3DSA:1.10.10.60 387 479 4.3E-23 T 23-10-2018 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 SMART SM00448 4 115 1.1E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 Pfam PF00158 Sigma-54 interaction domain 142 309 9.6E-72 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 SUPERFAMILY SSF52540 141 385 1.82E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 SMART SM00382 162 305 1.6E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 SUPERFAMILY SSF46689 403 479 6.87E-18 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG60_10255 4a750783b2e4f1bca28abdcad235f2a9 491 Gene3D G3DSA:1.10.8.60 315 386 6.6E-18 T 23-10-2018 CDG60_03385 e4223fcb5cd63ee256c8e60741100809 290 Gene3D G3DSA:3.40.50.150 30 280 5.6E-24 T 23-10-2018 CDG60_03385 e4223fcb5cd63ee256c8e60741100809 290 Pfam PF04072 Leucine carboxyl methyltransferase 58 181 2.2E-12 T 23-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 CDG60_03385 e4223fcb5cd63ee256c8e60741100809 290 SUPERFAMILY SSF53335 49 255 6.14E-31 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_04685 cf30b0d9bac8165842939affb42ad227 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 5.1E-155 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDG60_04685 cf30b0d9bac8165842939affb42ad227 345 Pfam PF00437 Type II/IV secretion system protein 11 269 2.0E-46 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_04685 cf30b0d9bac8165842939affb42ad227 345 Gene3D G3DSA:3.30.450.90 1 100 1.1E-36 T 23-10-2018 CDG60_04685 cf30b0d9bac8165842939affb42ad227 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_04685 cf30b0d9bac8165842939affb42ad227 345 Gene3D G3DSA:3.40.50.300 101 345 7.5E-107 T 23-10-2018 CDG60_04685 cf30b0d9bac8165842939affb42ad227 345 SUPERFAMILY SSF52540 5 334 1.95E-73 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04685 cf30b0d9bac8165842939affb42ad227 345 SMART SM00382 122 247 5.7E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_11375 529526eeb53747a5cf4b7aefcca937ad 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 151 185 5.6E-6 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_11375 529526eeb53747a5cf4b7aefcca937ad 205 Gene3D G3DSA:2.160.10.10 40 204 4.9E-43 T 23-10-2018 CDG60_11375 529526eeb53747a5cf4b7aefcca937ad 205 SUPERFAMILY SSF51161 34 204 5.89E-39 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_04655 5680da4bf18f985758a04729e63ccd36 151 Pfam PF01814 Hemerythrin HHE cation binding domain 12 124 1.4E-9 T 23-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDG60_04655 5680da4bf18f985758a04729e63ccd36 151 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 123 7.5E-31 T 23-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CDG60_04655 5680da4bf18f985758a04729e63ccd36 151 Gene3D G3DSA:1.20.120.50 1 127 1.4E-31 T 23-10-2018 IPR035938 Hemerythrin-like superfamily CDG60_04655 5680da4bf18f985758a04729e63ccd36 151 SUPERFAMILY SSF47188 2 124 4.32E-28 T 23-10-2018 IPR035938 Hemerythrin-like superfamily CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 Gene3D G3DSA:3.30.70.1660 112 342 3.8E-95 T 23-10-2018 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 SMART SM00937 63 178 4.2E-66 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 Pfam PF03462 PCRF domain 13 203 2.0E-73 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 SUPERFAMILY SSF75620 12 353 1.05E-135 T 23-10-2018 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.711 T 23-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 Gene3D G3DSA:3.30.160.20 210 297 3.8E-95 T 23-10-2018 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 5.4E-164 T 23-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CDG60_07380 292a8dde12b00adfeb07ed876f91933b 362 Pfam PF00472 RF-1 domain 213 321 5.6E-40 T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 Gene3D G3DSA:3.40.640.10 6 258 5.3E-89 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 13 393 52.449 T 23-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 12 392 2.8E-175 T 23-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 SUPERFAMILY SSF53383 25 393 2.76E-121 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 Gene3D G3DSA:3.90.1150.10 261 395 1.2E-50 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 PIRSF PIRSF001434 1 395 2.3E-131 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_10000 134ac09ddf3a642ff5c3c7900e9bcc54 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 392 1.1E-138 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 Gene3D G3DSA:3.30.560.10 45 469 1.1E-177 T 23-10-2018 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 Pfam PF00732 GMC oxidoreductase 6 296 1.7E-87 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 PIRSF PIRSF000137 1 539 3.1E-156 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 Pfam PF05199 GMC oxidoreductase 389 524 1.9E-41 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 Gene3D G3DSA:3.50.50.60 6 529 1.1E-177 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 255 269 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 SUPERFAMILY SSF54373 291 474 2.55E-41 T 23-10-2018 CDG60_07690 d0eb1e93823a4ccaa1b914f8f3d7ba24 542 SUPERFAMILY SSF51905 2 531 2.43E-92 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_14865 969955ac3c611d86670a2ed63a98bd74 298 Pfam PF04333 MlaA lipoprotein 72 264 4.3E-56 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG60_14865 969955ac3c611d86670a2ed63a98bd74 298 PRINTS PR01805 VacJ lipoprotein signature 141 158 7.9E-17 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG60_14865 969955ac3c611d86670a2ed63a98bd74 298 PRINTS PR01805 VacJ lipoprotein signature 73 86 7.9E-17 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG60_14865 969955ac3c611d86670a2ed63a98bd74 298 PRINTS PR01805 VacJ lipoprotein signature 90 106 7.9E-17 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG60_14865 969955ac3c611d86670a2ed63a98bd74 298 PRINTS PR01805 VacJ lipoprotein signature 176 193 7.9E-17 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG60_00190 d04084bbe1825614812a6d1e55a89cec 415 Pfam PF01464 Transglycosylase SLT domain 30 132 2.9E-26 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_00190 d04084bbe1825614812a6d1e55a89cec 415 SUPERFAMILY SSF53955 21 150 3.44E-41 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_00190 d04084bbe1825614812a6d1e55a89cec 415 Pfam PF07996 Type IV secretion system proteins 227 393 4.7E-6 T 23-10-2018 IPR014158 Type IV secretion system, VirB5 CDG60_00190 d04084bbe1825614812a6d1e55a89cec 415 Gene3D G3DSA:1.10.530.10 21 154 1.0E-39 T 23-10-2018 CDG60_00190 d04084bbe1825614812a6d1e55a89cec 415 Gene3D G3DSA:1.20.58.430 224 405 2.8E-7 T 23-10-2018 IPR023220 Type IV secretion system, VirB5-domain CDG60_00190 d04084bbe1825614812a6d1e55a89cec 415 SUPERFAMILY SSF101082 227 391 1.7E-9 T 23-10-2018 CDG60_00980 2b096b46597d199c8333f654570d2c56 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.5E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_00980 2b096b46597d199c8333f654570d2c56 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.5E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_00980 2b096b46597d199c8333f654570d2c56 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 3.5E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_00980 2b096b46597d199c8333f654570d2c56 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 3.5E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_00980 2b096b46597d199c8333f654570d2c56 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 3.5E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_00980 2b096b46597d199c8333f654570d2c56 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.5E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_00980 2b096b46597d199c8333f654570d2c56 248 SUPERFAMILY SSF51735 12 244 2.26E-57 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_00980 2b096b46597d199c8333f654570d2c56 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_00980 2b096b46597d199c8333f654570d2c56 248 Gene3D G3DSA:3.40.50.720 3 248 1.4E-65 T 23-10-2018 CDG60_00980 2b096b46597d199c8333f654570d2c56 248 Pfam PF00106 short chain dehydrogenase 16 212 9.0E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14250 6b48018b3c62854361a6f4605992f47f 330 Pfam PF07859 alpha/beta hydrolase fold 100 304 4.7E-53 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG60_14250 6b48018b3c62854361a6f4605992f47f 330 Gene3D G3DSA:3.40.50.1820 6 329 9.7E-71 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_14250 6b48018b3c62854361a6f4605992f47f 330 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 100 116 - T 23-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 CDG60_14250 6b48018b3c62854361a6f4605992f47f 330 SUPERFAMILY SSF53474 67 327 7.33E-57 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_12610 d642a80348328e0d562c7651421927a9 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 489 7.3E-213 T 23-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CDG60_12610 d642a80348328e0d562c7651421927a9 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 489 4.1E-193 T 23-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CDG60_07555 e467235c2385d14d12cb45aceb4db12c 143 Gene3D G3DSA:3.30.10.10 77 142 1.3E-19 T 23-10-2018 CDG60_07555 e467235c2385d14d12cb45aceb4db12c 143 Pfam PF11720 Peptidase inhibitor I78 family 80 143 1.5E-13 T 23-10-2018 IPR021719 Proteinase inhibitor I78 CDG60_07555 e467235c2385d14d12cb45aceb4db12c 143 Pfam PF03891 Domain of unknown function (DUF333) 30 75 1.5E-23 T 23-10-2018 IPR005590 Protein of unknown function DUF333 CDG60_07555 e467235c2385d14d12cb45aceb4db12c 143 SUPERFAMILY SSF54654 94 139 4.32E-5 T 23-10-2018 IPR036354 Proteinase inhibitor I13, potato inhibitor I superfamily CDG60_11145 c340b1887790f7a1995b63665e0d2096 259 Pfam PF01841 Transglutaminase-like superfamily 121 212 2.6E-22 T 23-10-2018 IPR002931 Transglutaminase-like CDG60_11145 c340b1887790f7a1995b63665e0d2096 259 Gene3D G3DSA:3.10.620.30 69 250 3.9E-44 T 23-10-2018 CDG60_11145 c340b1887790f7a1995b63665e0d2096 259 SMART SM00460 153 215 2.7E-19 T 23-10-2018 IPR002931 Transglutaminase-like CDG60_11145 c340b1887790f7a1995b63665e0d2096 259 SUPERFAMILY SSF54001 54 250 1.96E-36 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CDG60_11145 c340b1887790f7a1995b63665e0d2096 259 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 2.0E-11 T 23-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal CDG60_02175 7143d043bdf8e0d6ae4085b00b82e51e 281 Pfam PF13180 PDZ domain 215 277 1.3E-6 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_02175 7143d043bdf8e0d6ae4085b00b82e51e 281 Gene3D G3DSA:2.30.30.830 82 147 7.0E-9 T 23-10-2018 CDG60_02175 7143d043bdf8e0d6ae4085b00b82e51e 281 Gene3D G3DSA:2.30.42.10 181 279 2.1E-12 T 23-10-2018 CDG60_02175 7143d043bdf8e0d6ae4085b00b82e51e 281 SUPERFAMILY SSF50156 186 278 4.21E-13 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_02175 7143d043bdf8e0d6ae4085b00b82e51e 281 Pfam PF11356 Type II secretion system protein C 26 146 2.5E-16 T 23-10-2018 IPR024961 Type II secretion system protein C, N-terminal CDG60_04615 6d210cf8f3001abd99713125ccd1a2a7 309 Pfam PF01553 Acyltransferase 86 234 4.1E-11 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_04615 6d210cf8f3001abd99713125ccd1a2a7 309 SUPERFAMILY SSF69593 72 303 9.15E-30 T 23-10-2018 CDG60_04615 6d210cf8f3001abd99713125ccd1a2a7 309 SMART SM00563 94 236 5.0E-6 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_15860 aa3dc99447e1074b705988d5ff204dce 121 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.095 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15860 aa3dc99447e1074b705988d5ff204dce 121 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15860 aa3dc99447e1074b705988d5ff204dce 121 Pfam PF01196 Ribosomal protein L17 20 116 1.6E-32 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15860 aa3dc99447e1074b705988d5ff204dce 121 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 1.9E-45 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15860 aa3dc99447e1074b705988d5ff204dce 121 SUPERFAMILY SSF64263 1 119 4.71E-49 T 23-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15860 aa3dc99447e1074b705988d5ff204dce 121 Gene3D G3DSA:3.90.1030.10 1 117 4.4E-45 T 23-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 Gene3D G3DSA:1.10.150.80 296 370 3.1E-10 T 23-10-2018 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 Gene3D G3DSA:3.30.420.10 1 189 1.6E-46 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 SMART SM00474 2 169 1.5E-23 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 SUPERFAMILY SSF53098 3 206 1.97E-47 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 Gene3D G3DSA:1.10.150.80 196 287 8.2E-14 T 23-10-2018 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 SUPERFAMILY SSF47819 198 278 6.98E-18 T 23-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 Pfam PF01612 3'-5' exonuclease 3 168 7.7E-24 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 SUPERFAMILY SSF47819 292 366 2.62E-14 T 23-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CDG60_09985 608364349fdbe60379b6874c3797e5c7 380 Pfam PF00570 HRDC domain 210 276 1.4E-14 T 23-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CDG60_05380 ca87a989f453fcc5bac050a2e0b332da 204 Pfam PF01810 LysE type translocator 15 199 2.7E-21 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 Gene3D G3DSA:1.10.8.260 265 327 8.5E-119 T 23-10-2018 IPR023166 HI0933-like insert domain superfamily CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 SUPERFAMILY SSF160996 194 343 7.46E-33 T 23-10-2018 CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 396 1.5E-116 T 23-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 4.6E-7 T 23-10-2018 CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.6E-7 T 23-10-2018 CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 374 4.6E-7 T 23-10-2018 CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 Pfam PF03486 HI0933-like protein 6 396 6.2E-139 T 23-10-2018 CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 SUPERFAMILY SSF51905 5 398 2.42E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 Gene3D G3DSA:3.50.50.60 9 393 8.5E-119 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_13785 c19cfff93b540270f373af4d09a45ebd 399 Gene3D G3DSA:2.40.30.10 192 344 8.5E-119 T 23-10-2018 CDG60_09085 570568c758f49802fb2d0e1e7c218f24 527 Pfam PF00589 Phage integrase family 218 385 8.9E-11 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_09085 570568c758f49802fb2d0e1e7c218f24 527 SUPERFAMILY SSF56349 213 390 1.88E-14 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_09085 570568c758f49802fb2d0e1e7c218f24 527 Gene3D G3DSA:1.10.443.10 203 405 6.1E-14 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_08500 221af8347a32fc587caf4a0d498a2347 103 Gene3D G3DSA:3.30.1420.10 1 29 5.0E-6 T 23-10-2018 CDG60_08500 221af8347a32fc587caf4a0d498a2347 103 Pfam PF04358 DsrC like protein 2 103 4.2E-26 T 23-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CDG60_08500 221af8347a32fc587caf4a0d498a2347 103 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 103 4.4E-25 T 23-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CDG60_08500 221af8347a32fc587caf4a0d498a2347 103 Gene3D G3DSA:1.10.10.370 33 103 3.2E-17 T 23-10-2018 CDG60_08500 221af8347a32fc587caf4a0d498a2347 103 PIRSF PIRSF006223 1 103 1.4E-18 T 23-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CDG60_08500 221af8347a32fc587caf4a0d498a2347 103 SUPERFAMILY SSF69721 2 103 3.27E-27 T 23-10-2018 IPR025526 DsrC-like domain superfamily CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 Gene3D G3DSA:3.40.190.10 103 294 3.2E-36 T 23-10-2018 CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 SUPERFAMILY SSF53850 102 305 1.01E-26 T 23-10-2018 CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 SUPERFAMILY SSF46785 10 92 3.71E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.6E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.6E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.6E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 Gene3D G3DSA:3.40.190.10 177 279 3.2E-36 T 23-10-2018 CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 Gene3D G3DSA:1.10.10.10 7 94 1.6E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 Pfam PF03466 LysR substrate binding domain 98 305 2.4E-23 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_14140 d0bf7df28b12f7ad65deddc3f26d8205 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 3.4E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_04725 53b843aa8e865cefe5ea0481fa76efec 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 115 2.6E-5 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG60_04725 53b843aa8e865cefe5ea0481fa76efec 125 Gene3D G3DSA:3.10.180.10 4 120 2.0E-22 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_04725 53b843aa8e865cefe5ea0481fa76efec 125 SUPERFAMILY SSF54593 3 123 1.75E-19 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:3.30.70.1430 40 809 0.0 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 SUPERFAMILY SSF82693 138 323 1.6E-20 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 SUPERFAMILY SSF82693 40 132 7.15E-23 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:3.30.2090.10 706 801 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 SUPERFAMILY SSF82866 797 1021 4.58E-49 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:3.30.70.1430 561 656 0.0 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:1.20.1640.10 507 1015 0.0 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:3.30.70.1440 657 858 0.0 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 SUPERFAMILY SSF82866 290 488 4.71E-45 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 SUPERFAMILY SSF82714 707 799 1.18E-8 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Pfam PF00873 AcrB/AcrD/AcrF family 4 1018 2.1E-271 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 9.8E-61 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:1.20.1640.10 10 506 0.0 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 SUPERFAMILY SSF82693 560 651 6.8E-11 T 23-10-2018 CDG60_13655 484428f0c6a8b778f1f2115a9f6aca43 1034 SUPERFAMILY SSF82714 182 263 1.03E-15 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG60_11890 c8c87fd6187c81e9710fb3a80ac95de7 343 Gene3D G3DSA:3.65.10.20 12 327 7.2E-109 T 23-10-2018 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily CDG60_11890 c8c87fd6187c81e9710fb3a80ac95de7 343 Pfam PF01137 RNA 3'-terminal phosphate cyclase 17 329 8.9E-72 T 23-10-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain CDG60_11890 c8c87fd6187c81e9710fb3a80ac95de7 343 Gene3D G3DSA:3.30.360.20 190 279 7.2E-109 T 23-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily CDG60_11890 c8c87fd6187c81e9710fb3a80ac95de7 343 SUPERFAMILY SSF52913 190 282 1.57E-18 T 23-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily CDG60_11890 c8c87fd6187c81e9710fb3a80ac95de7 343 SUPERFAMILY SSF55205 10 185 9.81E-52 T 23-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CDG60_11890 c8c87fd6187c81e9710fb3a80ac95de7 343 PIRSF PIRSF005378 6 343 1.6E-93 T 23-10-2018 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 CDG60_11890 c8c87fd6187c81e9710fb3a80ac95de7 343 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 10 328 3.2E-103 T 23-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 CDG60_17780 7320590b0bfaa8d1dcd1317d44a03a65 388 SUPERFAMILY SSF48452 272 376 5.69E-18 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_17780 7320590b0bfaa8d1dcd1317d44a03a65 388 SMART SM00028 273 306 1.5 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_17780 7320590b0bfaa8d1dcd1317d44a03a65 388 SMART SM00028 307 340 0.1 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_17780 7320590b0bfaa8d1dcd1317d44a03a65 388 SMART SM00028 344 377 2.1 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_17780 7320590b0bfaa8d1dcd1317d44a03a65 388 Pfam PF13431 Tetratricopeptide repeat 295 326 1.0E-5 T 23-10-2018 CDG60_17780 7320590b0bfaa8d1dcd1317d44a03a65 388 Gene3D G3DSA:1.25.40.10 255 388 9.2E-19 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 SUPERFAMILY SSF56059 99 303 6.88E-53 T 23-10-2018 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 SUPERFAMILY SSF52440 9 99 9.59E-26 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 Gene3D G3DSA:3.40.50.20 1 87 2.2E-32 T 23-10-2018 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 303 6.1E-98 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 PIRSF PIRSF039102 47 309 7.5E-79 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 PIRSF PIRSF039102 5 46 1.3E-7 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 Gene3D G3DSA:3.30.470.20 89 289 2.9E-79 T 23-10-2018 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 Pfam PF07478 D-ala D-ala ligase C-terminus 107 300 1.0E-53 T 23-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 Pfam PF01820 D-ala D-ala ligase N-terminus 9 88 1.3E-16 T 23-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 304 34.045 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 23-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_17385 e5c9e79146671094ba551f1b98a1542e 309 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 274 - T 23-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_07485 87acec080988e82ef30cab6377534ea9 921 Pfam PF01103 Surface antigen 617 919 2.5E-37 T 23-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CDG60_07485 87acec080988e82ef30cab6377534ea9 921 Gene3D G3DSA:3.10.20.310 332 419 1.6E-18 T 23-10-2018 CDG60_07485 87acec080988e82ef30cab6377534ea9 921 Gene3D G3DSA:2.40.160.50 588 921 1.3E-96 T 23-10-2018 CDG60_07485 87acec080988e82ef30cab6377534ea9 921 Pfam PF17243 POTRA domain TamA domain 1 269 330 9.5E-8 T 23-10-2018 IPR035243 TamA, POTRA domain 1 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Gene3D G3DSA:2.40.30.10 207 307 9.5E-36 T 23-10-2018 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Gene3D G3DSA:3.30.70.240 397 490 1.2E-132 T 23-10-2018 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Gene3D G3DSA:2.40.50.250 491 607 1.2E-132 T 23-10-2018 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 147 6.2E-23 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 607 2.4E-283 T 23-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Pfam PF03144 Elongation factor Tu domain 2 227 297 1.0E-8 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 SUPERFAMILY SSF54980 406 521 1.82E-28 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Pfam PF00679 Elongation factor G C-terminus 405 485 1.9E-23 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Pfam PF00009 Elongation factor Tu GTP binding domain 6 202 9.9E-51 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 SUPERFAMILY SSF50447 161 307 2.29E-32 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Gene3D G3DSA:3.30.70.870 314 598 1.2E-132 T 23-10-2018 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 SUPERFAMILY SSF54980 310 395 2.09E-15 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 Gene3D G3DSA:3.40.50.300 4 206 1.8E-61 T 23-10-2018 CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 SMART SM00838 406 491 0.0046 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG60_14725 ca309e41ee63fefadd200c646caa52dc 611 SUPERFAMILY SSF52540 4 227 7.4E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 SUPERFAMILY SSF51735 109 296 1.24E-55 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 295 8.4E-51 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 SUPERFAMILY SSF52283 9 137 4.46E-48 T 23-10-2018 CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 Gene3D G3DSA:3.40.50.720 15 313 4.9E-104 T 23-10-2018 CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 SUPERFAMILY SSF55021 333 409 6.62E-20 T 23-10-2018 CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 Gene3D G3DSA:3.40.50.720 110 298 4.9E-104 T 23-10-2018 CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 327 7.3E-33 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG60_16375 6adbcfefbb7fa01f6d01db0f58ef7ea2 410 Gene3D G3DSA:3.30.70.260 329 409 5.2E-31 T 23-10-2018 CDG60_06580 65a1b14f9a80ef476db3806b37f1d6dc 264 Gene3D G3DSA:3.40.50.1820 1 264 1.9E-45 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_06580 65a1b14f9a80ef476db3806b37f1d6dc 264 SUPERFAMILY SSF53474 2 260 1.95E-27 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_06580 65a1b14f9a80ef476db3806b37f1d6dc 264 Pfam PF12697 Alpha/beta hydrolase family 7 256 1.1E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_00645 28f9d305349c96a5f85593dcf556b8ed 272 SUPERFAMILY SSF51215 25 117 3.92E-16 T 23-10-2018 IPR037923 Transcription regulator HTH-like CDG60_00645 28f9d305349c96a5f85593dcf556b8ed 272 Pfam PF12833 Helix-turn-helix domain 192 265 7.1E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_00645 28f9d305349c96a5f85593dcf556b8ed 272 Gene3D G3DSA:1.10.10.60 168 269 1.8E-21 T 23-10-2018 CDG60_00645 28f9d305349c96a5f85593dcf556b8ed 272 Pfam PF02311 AraC-like ligand binding domain 20 146 2.3E-19 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG60_00645 28f9d305349c96a5f85593dcf556b8ed 272 SMART SM00342 184 266 1.3E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_00645 28f9d305349c96a5f85593dcf556b8ed 272 SUPERFAMILY SSF46689 169 217 8.06E-6 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_00645 28f9d305349c96a5f85593dcf556b8ed 272 SUPERFAMILY SSF46689 220 266 8.06E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17070 0e59d7614f09819dd536a0fb870d62ed 291 Pfam PF02678 Pirin 22 127 6.2E-30 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG60_17070 0e59d7614f09819dd536a0fb870d62ed 291 Gene3D G3DSA:2.60.120.10 17 281 5.5E-80 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_17070 0e59d7614f09819dd536a0fb870d62ed 291 SUPERFAMILY SSF51182 2 288 2.22E-77 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_17070 0e59d7614f09819dd536a0fb870d62ed 291 Gene3D G3DSA:2.60.120.10 149 254 5.5E-80 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_17070 0e59d7614f09819dd536a0fb870d62ed 291 PIRSF PIRSF006232 3 290 5.4E-83 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG60_17070 0e59d7614f09819dd536a0fb870d62ed 291 Pfam PF05726 Pirin C-terminal cupin domain 183 285 4.2E-26 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDG60_10095 4726062726012da5db41c76733d8648c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.8E-50 T 23-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CDG60_10095 4726062726012da5db41c76733d8648c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 92 9.2E-12 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG60_10095 4726062726012da5db41c76733d8648c 112 Gene3D G3DSA:3.10.20.30 1 112 7.8E-33 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_10095 4726062726012da5db41c76733d8648c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 23-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG60_10095 4726062726012da5db41c76733d8648c 112 PRINTS PR00355 Adrenodoxin signature 42 52 4.6E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG60_10095 4726062726012da5db41c76733d8648c 112 PRINTS PR00355 Adrenodoxin signature 60 74 4.6E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG60_10095 4726062726012da5db41c76733d8648c 112 PRINTS PR00355 Adrenodoxin signature 83 91 4.6E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG60_10095 4726062726012da5db41c76733d8648c 112 SUPERFAMILY SSF54292 6 108 6.06E-30 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_11755 ee94f549e2dd7dacc0991655565a3024 274 Pfam PF02567 Phenazine biosynthesis-like protein 6 269 3.4E-59 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CDG60_11755 ee94f549e2dd7dacc0991655565a3024 274 Gene3D G3DSA:3.10.310.10 4 269 1.0E-84 T 23-10-2018 CDG60_11755 ee94f549e2dd7dacc0991655565a3024 274 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 267 1.1E-40 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CDG60_11755 ee94f549e2dd7dacc0991655565a3024 274 SUPERFAMILY SSF54506 2 272 9.94E-73 T 23-10-2018 CDG60_11755 ee94f549e2dd7dacc0991655565a3024 274 Gene3D G3DSA:3.10.310.10 117 262 1.0E-84 T 23-10-2018 CDG60_11755 ee94f549e2dd7dacc0991655565a3024 274 PIRSF PIRSF016184 1 274 1.5E-57 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CDG60_16110 e1044cf8df3c04ebf8873730d9db7c97 337 SUPERFAMILY SSF143865 2 274 5.62E-36 T 23-10-2018 CDG60_16110 e1044cf8df3c04ebf8873730d9db7c97 337 SUPERFAMILY SSF144083 272 335 1.83E-13 T 23-10-2018 CDG60_16110 e1044cf8df3c04ebf8873730d9db7c97 337 Pfam PF01544 CorA-like Mg2+ transporter protein 26 332 1.7E-52 T 23-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CDG60_16110 e1044cf8df3c04ebf8873730d9db7c97 337 Gene3D G3DSA:1.20.58.340 261 337 5.1E-15 T 23-10-2018 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 2.6E-61 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 SUPERFAMILY SSF51735 314 497 9.87E-57 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_02360 155512bd008659a2ca9b9275cf067118 717 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 716 0.0 T 23-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 Gene3D G3DSA:1.10.1040.50 499 711 8.7E-77 T 23-10-2018 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 210 6.6E-37 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 SUPERFAMILY SSF52096 6 307 1.77E-64 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_02360 155512bd008659a2ca9b9275cf067118 717 Gene3D G3DSA:3.40.50.720 315 498 3.8E-67 T 23-10-2018 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 SUPERFAMILY SSF48179 626 716 9.35E-24 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 SUPERFAMILY SSF48179 497 642 1.28E-29 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 Gene3D G3DSA:3.90.226.10 1 313 3.9E-97 T 23-10-2018 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 498 593 3.6E-23 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG60_02360 155512bd008659a2ca9b9275cf067118 717 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 495 519 - T 23-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG60_05990 64d988a9f652a0894931b60a6b2d3ffd 161 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 31 122 2.1E-9 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDG60_05990 64d988a9f652a0894931b60a6b2d3ffd 161 Gene3D G3DSA:3.90.1590.10 3 133 9.1E-9 T 23-10-2018 CDG60_05990 64d988a9f652a0894931b60a6b2d3ffd 161 SUPERFAMILY SSF51316 8 142 7.85E-21 T 23-10-2018 IPR011057 Mss4-like superfamily CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 SMART SM00881 4 100 4.2E-34 T 23-10-2018 IPR003781 CoA-binding GO:0048037 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 Gene3D G3DSA:3.40.50.720 1 125 1.6E-48 T 23-10-2018 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 Gene3D G3DSA:3.40.50.261 126 291 1.2E-73 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 Pfam PF02629 CoA binding domain 6 99 4.1E-28 T 23-10-2018 IPR003781 CoA-binding GO:0048037 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 SUPERFAMILY SSF52210 125 289 2.09E-55 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 23-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 290 1.3E-138 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 23-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 Pfam PF00549 CoA-ligase 153 271 2.1E-19 T 23-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-38 T 23-10-2018 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 2.7E-38 T 23-10-2018 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 2.7E-38 T 23-10-2018 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 2.7E-38 T 23-10-2018 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 43.08 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 PIRSF PIRSF001553 1 293 3.0E-130 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_05620 981ae640588ab11cd63850b25d5e94d7 296 SUPERFAMILY SSF51735 1 124 4.78E-39 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_15985 979b100c2ffb5197ce3608f4b5b7ff7d 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 196 5.3E-71 T 23-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15985 979b100c2ffb5197ce3608f4b5b7ff7d 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 196 3.3E-61 T 23-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CDG60_15985 979b100c2ffb5197ce3608f4b5b7ff7d 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 2 200 32.591 T 23-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15985 979b100c2ffb5197ce3608f4b5b7ff7d 200 SUPERFAMILY SSF52166 7 196 5.1E-68 T 23-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15985 979b100c2ffb5197ce3608f4b5b7ff7d 200 Gene3D G3DSA:3.40.1370.10 4 199 7.4E-65 T 23-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 Pfam PF06723 MreB/Mbl protein 13 339 2.5E-140 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 SUPERFAMILY SSF53067 153 339 1.15E-48 T 23-10-2018 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 Gene3D G3DSA:3.30.420.40 14 332 3.3E-126 T 23-10-2018 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 4.1E-148 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 SUPERFAMILY SSF53067 10 151 3.4E-36 T 23-10-2018 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 Gene3D G3DSA:3.30.420.40 157 322 3.3E-126 T 23-10-2018 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 6.9E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 6.9E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 6.9E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 6.9E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 6.9E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG60_14025 dd9b34bbede9064402738b126aa60045 348 Gene3D G3DSA:3.90.640.10 189 264 3.3E-126 T 23-10-2018 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 1.2E-112 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 SUPERFAMILY SSF52374 3 307 5.63E-113 T 23-10-2018 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 SUPERFAMILY SSF48163 313 471 1.96E-34 T 23-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 30.419 T 23-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 2.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 2.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 8.5E-146 T 23-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 Gene3D G3DSA:3.40.50.620 1 327 1.3E-151 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_16835 cbdb778c8e7f1fd7e8507da2bdf7336f 502 Gene3D G3DSA:1.10.10.350 370 493 4.3E-29 T 23-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 PIRSF PIRSF000171 8 608 7.3E-33 T 23-10-2018 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 SUPERFAMILY SSF51905 11 470 8.17E-79 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05590 1e96188e34daf85296a722e30c19191d 632 Pfam PF02910 Fumarate reductase flavoprotein C-term 496 631 2.9E-34 T 23-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 SUPERFAMILY SSF56425 246 364 3.89E-41 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 19 631 9.0E-222 T 23-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 SUPERFAMILY SSF46977 486 632 4.71E-38 T 23-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 Gene3D G3DSA:1.20.58.100 467 581 1.5E-30 T 23-10-2018 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 Pfam PF00890 FAD binding domain 19 437 1.9E-111 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05590 1e96188e34daf85296a722e30c19191d 632 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 53 62 - T 23-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_09375 4efa8bc7262937606d5456fd069f94dc 196 SUPERFAMILY SSF52141 11 191 4.18E-18 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_09375 4efa8bc7262937606d5456fd069f94dc 196 Gene3D G3DSA:3.40.470.10 7 195 1.2E-19 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_03880 6c1c2b6bfe90ec09256f64958505bf18 164 PIRSF PIRSF029598 1 143 8.6E-36 T 23-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CDG60_03880 6c1c2b6bfe90ec09256f64958505bf18 164 Pfam PF06146 Phosphate-starvation-inducible E 57 125 3.0E-17 T 23-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like CDG60_08675 cffe4c6f97ad10034349e97b2194bea8 399 SUPERFAMILY SSF56563 107 399 4.97E-72 T 23-10-2018 CDG60_08675 cffe4c6f97ad10034349e97b2194bea8 399 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 8 396 1.7E-114 T 23-10-2018 IPR024455 Phage capsid CDG60_08675 cffe4c6f97ad10034349e97b2194bea8 399 Pfam PF05065 Phage capsid family 114 396 7.2E-81 T 23-10-2018 IPR024455 Phage capsid CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 Gene3D G3DSA:3.40.30.10 38 142 1.6E-31 T 23-10-2018 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 SUPERFAMILY SSF52833 25 140 2.81E-35 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 PIRSF PIRSF000077 35 139 3.5E-31 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 Gene3D G3DSA:2.20.28.140 1 33 6.5E-14 T 23-10-2018 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 1.5E-31 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 PRINTS PR00421 Thioredoxin family signature 64 73 6.1E-7 T 23-10-2018 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 PRINTS PR00421 Thioredoxin family signature 103 114 6.1E-7 T 23-10-2018 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 PRINTS PR00421 Thioredoxin family signature 56 64 6.1E-7 T 23-10-2018 CDG60_15380 2465eb2bf1bd0a39d89ac403d4500bca 143 Pfam PF00085 Thioredoxin 38 137 1.6E-28 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.0E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.0E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.0E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.0E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.0E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.5E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.5E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.5E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 SUPERFAMILY SSF51735 2 259 9.54E-62 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 188 0.0013 T 23-10-2018 CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 Gene3D G3DSA:3.40.50.720 1 263 3.3E-65 T 23-10-2018 CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_05220 482c3c70213daa892d5e424f30ba0376 263 Pfam PF00106 short chain dehydrogenase 5 190 1.6E-50 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04675 fb1c4972926d41d2518703b4d14862a0 145 Gene3D G3DSA:1.10.10.10 2 84 1.4E-35 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04675 fb1c4972926d41d2518703b4d14862a0 145 Gene3D G3DSA:3.30.1490.190 85 141 3.4E-23 T 23-10-2018 CDG60_04675 fb1c4972926d41d2518703b4d14862a0 145 SUPERFAMILY SSF46785 6 134 3.06E-43 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_04675 fb1c4972926d41d2518703b4d14862a0 145 Pfam PF01475 Ferric uptake regulator family 10 130 1.2E-44 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDG60_14730 a66576cc474c1e10a9bf5d23cc640a61 456 TIGRFAM TIGR03173 pbuX: xanthine permease 33 452 1.5E-128 T 23-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 CDG60_14730 a66576cc474c1e10a9bf5d23cc640a61 456 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 368 388 - T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CDG60_14730 a66576cc474c1e10a9bf5d23cc640a61 456 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 450 9.4E-123 T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CDG60_14730 a66576cc474c1e10a9bf5d23cc640a61 456 Pfam PF00860 Permease family 29 420 4.1E-99 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CDG60_13130 2b950a9ba08859b82a7c309c9a77b1c8 267 SUPERFAMILY SSF52540 3 232 1.49E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_13130 2b950a9ba08859b82a7c309c9a77b1c8 267 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_13130 2b950a9ba08859b82a7c309c9a77b1c8 267 Pfam PF00005 ABC transporter 18 166 3.1E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_13130 2b950a9ba08859b82a7c309c9a77b1c8 267 SMART SM00382 27 215 1.1E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_13130 2b950a9ba08859b82a7c309c9a77b1c8 267 Gene3D G3DSA:3.40.50.300 2 255 5.7E-67 T 23-10-2018 CDG60_01945 b0c49891388df061fb38b262e3bc12ae 155 Pfam PF03477 ATP cone domain 50 136 3.2E-17 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CDG60_01945 b0c49891388df061fb38b262e3bc12ae 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 79.361 T 23-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CDG60_01945 b0c49891388df061fb38b262e3bc12ae 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 3.9E-59 T 23-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CDG60_13890 18942f5afa13638c3172a897de60bc3b 302 SUPERFAMILY SSF48576 11 290 1.35E-78 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG60_13890 18942f5afa13638c3172a897de60bc3b 302 Pfam PF00348 Polyprenyl synthetase 36 272 1.4E-55 T 23-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CDG60_13890 18942f5afa13638c3172a897de60bc3b 302 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 221 233 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site CDG60_13890 18942f5afa13638c3172a897de60bc3b 302 Gene3D G3DSA:1.10.600.10 8 299 1.2E-86 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG60_12105 db090548610424d20ff99065a585f478 514 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 33 127 2.3E-10 T 23-10-2018 IPR025554 Domain of unknown function DUF4140 CDG60_12105 db090548610424d20ff99065a585f478 514 Pfam PF13598 Domain of unknown function (DUF4139) 196 506 1.8E-41 T 23-10-2018 IPR037291 Domain of unknown function DUF4139 CDG60_12105 db090548610424d20ff99065a585f478 514 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 30 510 3.8E-54 T 23-10-2018 IPR011935 Conserved hypothetical protein CHP02231 CDG60_01225 4ab895ce7169997e812c84f9d0d255d4 301 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 300 30.758 T 23-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 CDG60_01225 4ab895ce7169997e812c84f9d0d255d4 301 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 295 3.5E-64 T 23-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 CDG60_17325 3582370e936c14c6d4c4495754c9134f 269 Pfam PF00753 Metallo-beta-lactamase superfamily 28 227 3.3E-16 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_17325 3582370e936c14c6d4c4495754c9134f 269 SUPERFAMILY SSF56281 28 249 2.94E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_17325 3582370e936c14c6d4c4495754c9134f 269 Gene3D G3DSA:3.60.15.10 2 245 8.5E-33 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_17325 3582370e936c14c6d4c4495754c9134f 269 SMART SM00849 30 227 2.6E-14 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_15920 ced19ce0868eef53531c01de114dc933 131 SUPERFAMILY SSF56047 2 130 2.49E-46 T 23-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15920 ced19ce0868eef53531c01de114dc933 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15920 ced19ce0868eef53531c01de114dc933 131 Pfam PF00410 Ribosomal protein S8 5 130 2.2E-48 T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15920 ced19ce0868eef53531c01de114dc933 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.656 T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15920 ced19ce0868eef53531c01de114dc933 131 Gene3D G3DSA:3.30.1370.30 2 73 2.5E-28 T 23-10-2018 CDG60_15920 ced19ce0868eef53531c01de114dc933 131 Gene3D G3DSA:3.30.1490.10 74 130 1.5E-21 T 23-10-2018 CDG60_03775 812b567c1174b469499fd8207e1f0530 258 SUPERFAMILY SSF53448 22 257 3.37E-26 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 Pfam PF00209 Sodium:neurotransmitter symporter family 5 119 2.1E-39 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 Pfam PF00209 Sodium:neurotransmitter symporter family 124 467 5.1E-64 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 SUPERFAMILY SSF161070 5 483 8.11E-135 T 23-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 5.8E-25 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 5.8E-25 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 310 329 5.8E-25 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG60_17860 ca4c563b28a4f0528c97bfdb31a74cc9 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 5.8E-25 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF52029 184 376 1.24E-82 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:3.50.7.10 173 379 8.9E-236 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.407 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-96 T 23-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF48592 7 521 5.42E-77 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.4E-254 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:1.10.560.10 8 521 8.9E-236 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF54849 139 203 2.52E-24 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG60_00345 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:3.30.260.10 138 410 8.9E-236 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Pfam PF00226 DnaJ domain 5 67 4.4E-29 T 23-10-2018 IPR001623 DnaJ domain CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Gene3D G3DSA:2.10.230.10 147 207 1.8E-37 T 23-10-2018 CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-10-2018 IPR018253 DnaJ domain, conserved site CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Pfam PF01556 DnaJ C terminal domain 121 332 5.8E-42 T 23-10-2018 IPR002939 Chaperone DnaJ, C-terminal CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 SMART SM00271 4 62 3.5E-33 T 23-10-2018 IPR001623 DnaJ domain CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 SUPERFAMILY SSF57938 134 209 7.32E-22 T 23-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 SUPERFAMILY SSF46565 1 108 1.96E-36 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 41.099 T 23-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 SUPERFAMILY SSF49493 258 343 6.67E-22 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Gene3D G3DSA:1.10.287.110 1 114 6.2E-38 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 SUPERFAMILY SSF49493 115 265 1.12E-19 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Gene3D G3DSA:2.60.260.20 253 365 1.6E-29 T 23-10-2018 CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 PRINTS PR00625 DnaJ domain signature 62 81 3.3E-33 T 23-10-2018 IPR001623 DnaJ domain CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 PRINTS PR00625 DnaJ domain signature 7 25 3.3E-33 T 23-10-2018 IPR001623 DnaJ domain CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 PRINTS PR00625 DnaJ domain signature 42 62 3.3E-33 T 23-10-2018 IPR001623 DnaJ domain CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 PRINTS PR00625 DnaJ domain signature 25 40 3.3E-33 T 23-10-2018 IPR001623 DnaJ domain CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Gene3D G3DSA:2.60.260.20 117 248 1.8E-37 T 23-10-2018 CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 1.2E-139 T 23-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CDG60_01035 590e2dbce7d79b2b48757a39b0bc56a2 370 Pfam PF00684 DnaJ central domain 147 207 1.8E-14 T 23-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 Gene3D G3DSA:1.10.287.40 1 104 9.1E-25 T 23-10-2018 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 SUPERFAMILY SSF55681 116 417 4.24E-103 T 23-10-2018 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.387 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 6.4E-40 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 SUPERFAMILY SSF46589 1 112 1.67E-31 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.8E-32 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.8E-32 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.8E-32 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.8E-32 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.8E-32 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 PIRSF PIRSF001529 1 423 2.4E-186 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.8E-31 T 23-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 2.0E-174 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG60_05295 366f1245df63f6d5881fedf2422251fb 423 Gene3D G3DSA:3.30.930.10 105 423 3.9E-119 T 23-10-2018 CDG60_01565 af602c7c3e64726f0469ef7fbbbbe442 156 Gene3D G3DSA:1.20.5.620 62 122 9.0E-14 T 23-10-2018 CDG60_01565 af602c7c3e64726f0469ef7fbbbbe442 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.1E-35 T 23-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDG60_01565 af602c7c3e64726f0469ef7fbbbbe442 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 3.7E-46 T 23-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CDG60_01565 af602c7c3e64726f0469ef7fbbbbe442 156 SUPERFAMILY SSF81573 63 121 3.66E-12 T 23-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CDG60_01565 af602c7c3e64726f0469ef7fbbbbe442 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.183 T 23-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDG60_03845 4b5ee0e73a1616ad4422a1d57cf10c3d 292 PIRSF PIRSF026649 1 286 7.2E-69 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_03845 4b5ee0e73a1616ad4422a1d57cf10c3d 292 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 277 9.4E-44 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.5E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.5E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.5E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.5E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.5E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 Gene3D G3DSA:3.40.50.720 11 264 3.3E-63 T 23-10-2018 CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 SUPERFAMILY SSF51735 11 270 2.11E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PIRSF PIRSF000126 1 278 5.7E-51 T 23-10-2018 CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 Pfam PF00106 short chain dehydrogenase 16 204 9.6E-50 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 5.1E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 5.1E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_05565 89a644c43841c620d134b0bf72ebb361 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.1E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_04595 d1321e0be4da2129a238dab2d38f2648 90 SUPERFAMILY SSF55229 38 89 2.48E-11 T 23-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CDG60_04595 d1321e0be4da2129a238dab2d38f2648 90 Pfam PF03776 Septum formation topological specificity factor MinE 17 87 8.2E-19 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDG60_04595 d1321e0be4da2129a238dab2d38f2648 90 Hamap MF_00262 Cell division topological specificity factor [minE]. 4 90 15.103 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDG60_04595 d1321e0be4da2129a238dab2d38f2648 90 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 15 88 1.1E-19 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDG60_04595 d1321e0be4da2129a238dab2d38f2648 90 Gene3D G3DSA:3.30.1070.10 21 88 8.2E-20 T 23-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CDG60_07235 ff930250cb868df0d645f07447a5c0f4 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.4E-24 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG60_07235 ff930250cb868df0d645f07447a5c0f4 133 Gene3D G3DSA:3.10.180.10 1 132 5.8E-50 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_07235 ff930250cb868df0d645f07447a5c0f4 133 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 23-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDG60_07235 ff930250cb868df0d645f07447a5c0f4 133 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 1.2E-66 T 23-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDG60_07235 ff930250cb868df0d645f07447a5c0f4 133 SUPERFAMILY SSF54593 1 127 3.76E-36 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_07235 ff930250cb868df0d645f07447a5c0f4 133 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDG60_16425 a86a233820a614d41d5e0af940204642 149 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 102 1.9E-9 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG60_16425 a86a233820a614d41d5e0af940204642 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 4.1E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16425 a86a233820a614d41d5e0af940204642 149 SUPERFAMILY SSF54523 8 129 2.77E-20 T 23-10-2018 CDG60_16425 a86a233820a614d41d5e0af940204642 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 1.8E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16425 a86a233820a614d41d5e0af940204642 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 1.1E-10 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16425 a86a233820a614d41d5e0af940204642 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.1E-10 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16425 a86a233820a614d41d5e0af940204642 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16425 a86a233820a614d41d5e0af940204642 149 Gene3D G3DSA:3.30.700.10 8 145 1.0E-21 T 23-10-2018 CDG60_08860 3347e2c25171d9244466c612248bc594 385 Gene3D G3DSA:1.20.1250.20 8 187 5.4E-22 T 23-10-2018 CDG60_08860 3347e2c25171d9244466c612248bc594 385 SUPERFAMILY SSF103473 10 381 1.29E-47 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_08860 3347e2c25171d9244466c612248bc594 385 Gene3D G3DSA:1.20.1250.20 191 384 1.6E-34 T 23-10-2018 CDG60_08860 3347e2c25171d9244466c612248bc594 385 Pfam PF12832 MFS_1 like family 9 362 1.7E-83 T 23-10-2018 IPR024989 Major facilitator superfamily associated domain CDG60_08860 3347e2c25171d9244466c612248bc594 385 PIRSF PIRSF004925 1 385 2.6E-105 T 23-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter CDG60_03815 903ef9a508d33140059c184827d7c1e9 182 Gene3D G3DSA:3.40.630.30 7 182 3.6E-33 T 23-10-2018 CDG60_03815 903ef9a508d33140059c184827d7c1e9 182 SUPERFAMILY SSF55729 8 154 5.9E-18 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_03815 903ef9a508d33140059c184827d7c1e9 182 Pfam PF13302 Acetyltransferase (GNAT) domain 15 151 9.3E-12 T 23-10-2018 IPR000182 GNAT domain CDG60_08770 239314f1ee5d0151de16cbdab7a83d60 194 Pfam PF11860 N-acetylmuramidase 20 191 2.5E-57 T 23-10-2018 IPR024408 N-acetylmuramidase CDG60_15285 6a92a0038a7110676021e7e47c377ee1 135 SUPERFAMILY SSF52821 14 133 1.22E-26 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_15285 6a92a0038a7110676021e7e47c377ee1 135 Gene3D G3DSA:3.40.250.10 31 134 3.3E-24 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_15285 6a92a0038a7110676021e7e47c377ee1 135 SMART SM00450 37 130 4.3E-15 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_15285 6a92a0038a7110676021e7e47c377ee1 135 Pfam PF00581 Rhodanese-like domain 47 126 1.7E-13 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 407 418 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 267 280 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 138 151 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 191 204 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 205 220 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 281 294 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 162 170 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 469 482 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 PRINTS PR00415 Aconitase family signature 360 374 2.2E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 Pfam PF00330 Aconitase family (aconitate hydratase) 68 538 9.6E-145 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 SUPERFAMILY SSF53732 16 592 5.23E-185 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 SUPERFAMILY SSF52016 603 866 3.92E-68 T 23-10-2018 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 Gene3D G3DSA:3.30.499.10 361 566 9.9E-77 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 Gene3D G3DSA:1.10.1440.20 567 622 3.0E-7 T 23-10-2018 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 Gene3D G3DSA:3.20.19.10 623 867 8.9E-83 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 Gene3D G3DSA:3.30.499.20 4 360 9.5E-130 T 23-10-2018 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 868 0.0 T 23-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 CDG60_14660 0f2b0073f89e9c9b264ddcd259c13bfd 872 Pfam PF00694 Aconitase C-terminal domain 661 793 1.9E-31 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDG60_14030 8de170fb5b4d7687bfaa08a10a2f1013 104 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 11 104 22.322 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDG60_14030 8de170fb5b4d7687bfaa08a10a2f1013 104 SUPERFAMILY SSF141000 12 102 2.88E-27 T 23-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 CDG60_14030 8de170fb5b4d7687bfaa08a10a2f1013 104 Gene3D G3DSA:1.10.20.60 9 102 2.7E-21 T 23-10-2018 CDG60_14030 8de170fb5b4d7687bfaa08a10a2f1013 104 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 28 99 2.5E-17 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDG60_14030 8de170fb5b4d7687bfaa08a10a2f1013 104 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 13 104 5.4E-28 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDG60_15950 62b2c3acba6bf761fd7ffbe9c3d25f56 65 SUPERFAMILY SSF46561 1 63 2.62E-18 T 23-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15950 62b2c3acba6bf761fd7ffbe9c3d25f56 65 Gene3D G3DSA:1.10.287.310 1 63 2.3E-21 T 23-10-2018 CDG60_15950 62b2c3acba6bf761fd7ffbe9c3d25f56 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15950 62b2c3acba6bf761fd7ffbe9c3d25f56 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.26 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15950 62b2c3acba6bf761fd7ffbe9c3d25f56 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 8.3E-18 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15950 62b2c3acba6bf761fd7ffbe9c3d25f56 65 Pfam PF00831 Ribosomal L29 protein 4 60 5.8E-19 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 Gene3D G3DSA:3.90.1310.10 64 244 1.3E-47 T 23-10-2018 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 600 9.8E-74 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 606 5.8E-219 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 Gene3D G3DSA:3.30.1390.30 85 160 1.3E-47 T 23-10-2018 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 SUPERFAMILY SSF56601 250 607 1.27E-97 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 SUPERFAMILY SSF56519 56 249 1.31E-52 T 23-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 Gene3D G3DSA:3.40.710.10 245 616 2.8E-100 T 23-10-2018 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 235 3.5E-46 T 23-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CDG60_12745 947eeddc985a5db49958cf5ee281a36c 659 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 609 49.855 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_08935 34f30c51b58893ff5aec7cf010ba4c3c 275 Pfam PF12697 Alpha/beta hydrolase family 33 264 3.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_08935 34f30c51b58893ff5aec7cf010ba4c3c 275 Gene3D G3DSA:3.40.50.1820 19 273 1.1E-21 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_08935 34f30c51b58893ff5aec7cf010ba4c3c 275 SUPERFAMILY SSF53474 26 273 1.17E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11970 ce9f9f90770b580e6dd2b7ff7f40bf10 221 Gene3D G3DSA:3.40.50.2300 1 123 2.3E-36 T 23-10-2018 CDG60_11970 ce9f9f90770b580e6dd2b7ff7f40bf10 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.8E-22 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_11970 ce9f9f90770b580e6dd2b7ff7f40bf10 221 Gene3D G3DSA:1.10.10.10 124 221 1.4E-28 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_11970 ce9f9f90770b580e6dd2b7ff7f40bf10 221 SMART SM00862 145 216 1.6E-25 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_11970 ce9f9f90770b580e6dd2b7ff7f40bf10 221 SMART SM00448 1 112 8.4E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_11970 ce9f9f90770b580e6dd2b7ff7f40bf10 221 SUPERFAMILY SSF52172 1 179 1.76E-39 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_11970 ce9f9f90770b580e6dd2b7ff7f40bf10 221 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_12045 0accf000f88f34a7ac2c821eb3e1c770 157 Gene3D G3DSA:3.40.50.2300 1 136 1.2E-33 T 23-10-2018 CDG60_12045 0accf000f88f34a7ac2c821eb3e1c770 157 SUPERFAMILY SSF52788 1 135 1.02E-34 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG60_12045 0accf000f88f34a7ac2c821eb3e1c770 157 SMART SM00226 1 136 1.4E-33 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG60_12045 0accf000f88f34a7ac2c821eb3e1c770 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 134 3.6E-22 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG60_18065 8115f2712c4884fc85376045f4100c38 440 Gene3D G3DSA:2.30.40.10 10 429 5.9E-197 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_18065 8115f2712c4884fc85376045f4100c38 440 Pfam PF01979 Amidohydrolase family 73 432 1.7E-72 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG60_18065 8115f2712c4884fc85376045f4100c38 440 SUPERFAMILY SSF51338 31 435 8.1E-6 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_18065 8115f2712c4884fc85376045f4100c38 440 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 431 3.7E-191 T 23-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CDG60_18065 8115f2712c4884fc85376045f4100c38 440 SUPERFAMILY SSF51556 75 378 2.28E-102 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_18065 8115f2712c4884fc85376045f4100c38 440 Gene3D G3DSA:3.20.20.140 76 393 5.9E-197 T 23-10-2018 CDG60_11140 c1557e3b74610fc2d9d122e7f3763342 244 PIRSF PIRSF009120 1 243 1.4E-107 T 23-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 CDG60_11140 c1557e3b74610fc2d9d122e7f3763342 244 Gene3D G3DSA:3.60.20.10 2 237 3.6E-29 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_11140 c1557e3b74610fc2d9d122e7f3763342 244 SUPERFAMILY SSF56235 2 237 7.53E-37 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_11140 c1557e3b74610fc2d9d122e7f3763342 244 Pfam PF00227 Proteasome subunit 4 173 5.6E-10 T 23-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 3.4E-228 T 23-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 90.406 T 23-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 Gene3D G3DSA:1.20.200.10 138 405 7.4E-117 T 23-10-2018 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 Pfam PF00206 Lyase 11 341 3.3E-115 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 5.2E-5 T 23-10-2018 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 5.2E-5 T 23-10-2018 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 Gene3D G3DSA:1.10.40.30 406 463 2.0E-27 T 23-10-2018 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 Gene3D G3DSA:1.10.275.10 4 137 1.1E-57 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 SUPERFAMILY SSF48557 3 461 1.4E-156 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 2.5E-34 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 2.5E-34 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.5E-34 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 2.5E-34 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_09515 47d9460d2916cc7fde4ffeb2f3456302 464 Pfam PF10415 Fumarase C C-terminus 407 459 8.4E-26 T 23-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG60_00420 cce7904fa1c6e20a333cabe6ee48e107 1178 SUPERFAMILY SSF56349 650 894 2.8E-7 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_12675 340d6f9ea9890b1ec013294974b85a15 316 Gene3D G3DSA:3.40.630.10 21 316 1.2E-54 T 23-10-2018 CDG60_12675 340d6f9ea9890b1ec013294974b85a15 316 SUPERFAMILY SSF53187 54 314 5.14E-42 T 23-10-2018 CDG60_12675 340d6f9ea9890b1ec013294974b85a15 316 Pfam PF04389 Peptidase family M28 95 310 1.6E-28 T 23-10-2018 IPR007484 Peptidase M28 CDG60_06055 275a1ff858818415f93c00a8cc45b6f7 612 PIRSF PIRSF002741 12 601 8.0E-82 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CDG60_06055 275a1ff858818415f93c00a8cc45b6f7 612 Gene3D G3DSA:3.10.105.10 315 576 5.0E-211 T 23-10-2018 CDG60_06055 275a1ff858818415f93c00a8cc45b6f7 612 SUPERFAMILY SSF53850 53 598 1.81E-96 T 23-10-2018 CDG60_06055 275a1ff858818415f93c00a8cc45b6f7 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 101 513 1.1E-62 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain CDG60_06055 275a1ff858818415f93c00a8cc45b6f7 612 Gene3D G3DSA:3.40.190.10 32 596 5.0E-211 T 23-10-2018 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 Gene3D G3DSA:1.10.45.10 389 425 2.3E-8 T 23-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 Pfam PF01565 FAD binding domain 21 152 2.3E-22 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 Gene3D G3DSA:3.30.43.10 3 69 2.9E-24 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 PIRSF PIRSF000136 1 427 4.3E-102 T 23-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 SUPERFAMILY SSF56176 5 182 1.12E-37 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 Gene3D G3DSA:3.30.70.2520 296 388 1.3E-26 T 23-10-2018 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 Pfam PF04030 D-arabinono-1,4-lactone oxidase 177 423 2.0E-57 T 23-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 10 425 2.4E-140 T 23-10-2018 CDG60_15060 a185ec55fc9fb238a2589f9eafce905d 428 Gene3D G3DSA:3.30.465.10 71 195 3.4E-30 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 SUPERFAMILY SSF51230 1 92 7.2E-24 T 23-10-2018 IPR011053 Single hybrid motif CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 Gene3D G3DSA:2.40.50.100 2 79 1.7E-20 T 23-10-2018 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 401 1.3E-176 T 23-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 399 3.8E-79 T 23-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 SUPERFAMILY SSF52777 174 401 6.23E-87 T 23-10-2018 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 Gene3D G3DSA:3.30.559.10 170 402 1.1E-93 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 Pfam PF00364 Biotin-requiring enzyme 4 75 1.3E-19 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 Gene3D G3DSA:4.10.320.10 107 158 3.4E-12 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 SUPERFAMILY SSF47005 118 157 1.44E-9 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG60_05605 86b26bdad6ed14f4467e60ce593dbb8d 402 Pfam PF02817 e3 binding domain 122 152 3.0E-10 T 23-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CDG60_11710 d2a612fc8903d09b858d136c306f9279 487 SUPERFAMILY SSF55154 1 219 1.11E-35 T 23-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CDG60_11710 d2a612fc8903d09b858d136c306f9279 487 SMART SM01118 1 203 1.8E-25 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDG60_11710 d2a612fc8903d09b858d136c306f9279 487 Pfam PF01928 CYTH domain 1 178 6.6E-20 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDG60_11710 d2a612fc8903d09b858d136c306f9279 487 Gene3D G3DSA:2.40.320.10 1 196 1.8E-31 T 23-10-2018 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 Pfam PF00342 Phosphoglucose isomerase 56 548 1.2E-168 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 Gene3D G3DSA:3.40.50.10490 19 512 1.7E-199 T 23-10-2018 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 50 530 38.691 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 Gene3D G3DSA:3.40.50.10490 102 297 1.7E-199 T 23-10-2018 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 Gene3D G3DSA:1.10.1390.10 513 554 2.5E-15 T 23-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 271 284 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 SUPERFAMILY SSF53697 23 552 4.73E-173 T 23-10-2018 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 503 520 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 489 503 1.3E-50 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 503 516 1.3E-50 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 344 365 1.3E-50 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 1.3E-50 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 267 285 1.3E-50 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_01145 e94f37208b43746f2fb2cf562fb5a460 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 471 489 1.3E-50 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 21 270 7.7E-81 T 23-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 274 39.841 T 23-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 275 3.3E-66 T 23-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 Gene3D G3DSA:1.10.8.10 4 81 2.2E-14 T 23-10-2018 CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 SUPERFAMILY SSF53335 19 258 8.44E-49 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 Pfam PF05175 Methyltransferase small domain 93 210 1.1E-14 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CDG60_07385 803bbcaa1b429da9d1218ce7f0d6bc1d 285 Gene3D G3DSA:3.40.50.150 84 275 6.8E-53 T 23-10-2018 CDG60_03030 fb116ddfcc1c1c8c905f20475e09169c 312 SUPERFAMILY SSF160240 221 295 6.02E-5 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDG60_03030 fb116ddfcc1c1c8c905f20475e09169c 312 SUPERFAMILY SSF161111 5 218 1.57E-43 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG60_03030 fb116ddfcc1c1c8c905f20475e09169c 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 300 6.1E-45 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG60_03030 fb116ddfcc1c1c8c905f20475e09169c 312 Gene3D G3DSA:1.20.1510.10 5 216 1.9E-37 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG60_03030 fb116ddfcc1c1c8c905f20475e09169c 312 Pfam PF01545 Cation efflux family 10 216 2.5E-37 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 4.3E-163 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 1.2E-153 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.409 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 SUPERFAMILY SSF55681 10 291 5.92E-137 T 23-10-2018 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.3E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.3E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.3E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.3E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.3E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.3E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 Gene3D G3DSA:1.20.58.180 217 298 2.2E-34 T 23-10-2018 CDG60_02880 4cb3743124de2b229f0f31f00f26f9f5 330 Gene3D G3DSA:3.30.930.10 3 216 4.0E-113 T 23-10-2018 CDG60_17355 a395320c271b31c1a25a7db55992c8ca 230 Gene3D G3DSA:2.70.70.10 74 229 1.4E-44 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG60_17355 a395320c271b31c1a25a7db55992c8ca 230 SUPERFAMILY SSF51261 26 226 1.41E-52 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG60_17355 a395320c271b31c1a25a7db55992c8ca 230 Pfam PF01551 Peptidase family M23 128 222 4.1E-31 T 23-10-2018 IPR016047 Peptidase M23 CDG60_06730 615f29a026ad2033a12940dfdf08ef17 485 Gene3D G3DSA:3.40.605.10 27 474 1.1E-179 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_06730 615f29a026ad2033a12940dfdf08ef17 485 SUPERFAMILY SSF53720 7 483 1.3E-169 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_06730 615f29a026ad2033a12940dfdf08ef17 485 Pfam PF00171 Aldehyde dehydrogenase family 27 479 7.1E-172 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_06730 615f29a026ad2033a12940dfdf08ef17 485 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 33 477 1.1E-206 T 23-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CDG60_06730 615f29a026ad2033a12940dfdf08ef17 485 Gene3D G3DSA:3.40.309.10 263 451 1.1E-179 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_06730 615f29a026ad2033a12940dfdf08ef17 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG60_06730 615f29a026ad2033a12940dfdf08ef17 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG60_06630 549870fcf269c236d993f39b90f8ffa3 258 Gene3D G3DSA:3.40.1280.10 113 258 2.6E-47 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_06630 549870fcf269c236d993f39b90f8ffa3 258 SUPERFAMILY SSF75217 110 258 6.41E-38 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_06630 549870fcf269c236d993f39b90f8ffa3 258 SUPERFAMILY SSF55315 5 104 1.65E-18 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG60_06630 549870fcf269c236d993f39b90f8ffa3 258 Pfam PF00588 SpoU rRNA Methylase family 116 250 4.0E-33 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG60_06630 549870fcf269c236d993f39b90f8ffa3 258 Gene3D G3DSA:3.30.1330.30 5 105 1.2E-11 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG60_06960 0b1d440aa1058778d00da04d3246f724 214 SUPERFAMILY SSF47240 10 214 7.58E-73 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_06960 0b1d440aa1058778d00da04d3246f724 214 PIRSF PIRSF020736 1 214 9.6E-88 T 23-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CDG60_06960 0b1d440aa1058778d00da04d3246f724 214 Gene3D G3DSA:1.20.1260.10 6 214 1.9E-74 T 23-10-2018 IPR012347 Ferritin-like CDG60_06960 0b1d440aa1058778d00da04d3246f724 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 59 1.9E-16 T 23-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CDG60_06960 0b1d440aa1058778d00da04d3246f724 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 62 210 2.8E-48 T 23-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CDG60_05240 a63ad0a100b240229596bacb910fb8e1 485 Gene3D G3DSA:2.20.200.10 102 351 7.4E-127 T 23-10-2018 CDG60_05240 a63ad0a100b240229596bacb910fb8e1 485 Gene3D G3DSA:1.20.1600.10 57 462 7.4E-127 T 23-10-2018 CDG60_05240 a63ad0a100b240229596bacb910fb8e1 485 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 462 1.8E-107 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDG60_05240 a63ad0a100b240229596bacb910fb8e1 485 SUPERFAMILY SSF56954 10 462 6.02E-105 T 23-10-2018 CDG60_05240 a63ad0a100b240229596bacb910fb8e1 485 Pfam PF02321 Outer membrane efflux protein 280 460 2.4E-28 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_05240 a63ad0a100b240229596bacb910fb8e1 485 Pfam PF02321 Outer membrane efflux protein 67 251 1.1E-25 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_14590 e89874cece231306b6f5bc815249b752 494 SUPERFAMILY SSF53067 3 252 7.17E-89 T 23-10-2018 CDG60_14590 e89874cece231306b6f5bc815249b752 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 491 6.8E-213 T 23-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CDG60_14590 e89874cece231306b6f5bc815249b752 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.0E-75 T 23-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CDG60_14590 e89874cece231306b6f5bc815249b752 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 447 5.3E-60 T 23-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CDG60_14590 e89874cece231306b6f5bc815249b752 494 PIRSF PIRSF000538 1 494 1.6E-170 T 23-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDG60_14590 e89874cece231306b6f5bc815249b752 494 Gene3D G3DSA:3.30.420.40 1 250 1.6E-101 T 23-10-2018 CDG60_14590 e89874cece231306b6f5bc815249b752 494 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 52.46 T 23-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CDG60_14590 e89874cece231306b6f5bc815249b752 494 SUPERFAMILY SSF53067 252 492 4.1E-80 T 23-10-2018 CDG60_14590 e89874cece231306b6f5bc815249b752 494 Gene3D G3DSA:3.30.420.40 251 494 1.3E-83 T 23-10-2018 CDG60_14590 e89874cece231306b6f5bc815249b752 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 23-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDG60_14590 e89874cece231306b6f5bc815249b752 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 23-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 SUPERFAMILY SSF56322 15 490 1.02E-151 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 Gene3D G3DSA:3.60.120.10 1 494 7.2E-176 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 173 1.1E-36 T 23-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 PRINTS PR00095 Anthranilate synthase component I signature 422 436 3.5E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 PRINTS PR00095 Anthranilate synthase component I signature 328 341 3.5E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 PRINTS PR00095 Anthranilate synthase component I signature 342 355 3.5E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 PRINTS PR00095 Anthranilate synthase component I signature 437 451 3.5E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 Pfam PF00425 chorismate binding enzyme 221 480 2.0E-92 T 23-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDG60_02195 d6b833595f9e046c9d550a2d968dc826 497 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 488 1.5E-161 T 23-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 Gene3D G3DSA:3.40.50.10490 4 196 3.7E-58 T 23-10-2018 CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 SUPERFAMILY SSF53697 7 322 5.34E-65 T 23-10-2018 CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 SMART SM00116 276 324 3.6E-6 T 23-10-2018 IPR000644 CBS domain CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 SMART SM00116 210 258 0.22 T 23-10-2018 IPR000644 CBS domain CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 Gene3D G3DSA:3.10.580.10 197 322 1.3E-44 T 23-10-2018 CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 Pfam PF01380 SIS domain 41 172 4.4E-25 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 Pfam PF00571 CBS domain 269 322 2.3E-11 T 23-10-2018 IPR000644 CBS domain CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 Pfam PF00571 CBS domain 201 257 2.6E-5 T 23-10-2018 IPR000644 CBS domain CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 2.2E-105 T 23-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CDG60_11420 4af70c6c53ccb81bdc7f7a04661d8f7d 325 PIRSF PIRSF004692 1 325 3.6E-134 T 23-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 SUPERFAMILY SSF51064 135 178 3.4E-10 T 23-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 ProSitePatterns PS01071 grpE protein signature. 136 177 - T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 Hamap MF_01151 Protein GrpE [grpE]. 3 179 15.834 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 Gene3D G3DSA:3.90.20.20 22 125 8.2E-16 T 23-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 SUPERFAMILY SSF58014 31 126 1.7E-17 T 23-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 Gene3D G3DSA:2.30.22.10 126 178 1.1E-13 T 23-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 PRINTS PR00773 GrpE protein signature 158 177 1.4E-9 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 PRINTS PR00773 GrpE protein signature 133 148 1.4E-9 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 PRINTS PR00773 GrpE protein signature 58 74 1.4E-9 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG60_17945 4da2a286ef4dc1479f317003ae3c5142 179 Pfam PF01025 GrpE 15 178 2.6E-34 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG60_07950 ce158bdf64c9a704e99f53f65b585bc5 286 Pfam PF00892 EamA-like transporter family 3 132 6.5E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_07950 ce158bdf64c9a704e99f53f65b585bc5 286 Pfam PF00892 EamA-like transporter family 146 280 3.0E-6 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_07950 ce158bdf64c9a704e99f53f65b585bc5 286 SUPERFAMILY SSF103481 42 135 2.88E-10 T 23-10-2018 CDG60_07950 ce158bdf64c9a704e99f53f65b585bc5 286 SUPERFAMILY SSF103481 184 281 1.28E-7 T 23-10-2018 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 Pfam PF00459 Inositol monophosphatase family 2 264 5.5E-66 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 Gene3D G3DSA:3.30.540.10 1 144 5.1E-45 T 23-10-2018 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 Gene3D G3DSA:3.40.190.80 145 272 1.9E-31 T 23-10-2018 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 23-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 23-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 SUPERFAMILY SSF56655 1 272 4.84E-76 T 23-10-2018 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 2.6E-49 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 2.6E-49 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 2.6E-49 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 2.6E-49 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 2.6E-49 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_16145 d5b3a37079de0eb6d9ebd292bfc9721e 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 2.6E-49 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG60_01350 19b2986796ed556307422509ca9379da 305 SUPERFAMILY SSF56042 139 291 2.39E-35 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_01350 19b2986796ed556307422509ca9379da 305 Gene3D G3DSA:3.30.1330.10 1 141 9.0E-47 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_01350 19b2986796ed556307422509ca9379da 305 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 304 3.0E-106 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDG60_01350 19b2986796ed556307422509ca9379da 305 SUPERFAMILY SSF55326 2 135 2.88E-37 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG60_01350 19b2986796ed556307422509ca9379da 305 Gene3D G3DSA:3.90.650.10 143 305 8.3E-49 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG60_01350 19b2986796ed556307422509ca9379da 305 Pfam PF02769 AIR synthase related protein, C-terminal domain 186 282 9.0E-6 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG60_01350 19b2986796ed556307422509ca9379da 305 PIRSF PIRSF005303 1 304 1.7E-95 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDG60_01350 19b2986796ed556307422509ca9379da 305 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 304 29.252 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDG60_01350 19b2986796ed556307422509ca9379da 305 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 135 3.3E-27 T 23-10-2018 IPR016188 PurM-like, N-terminal domain CDG60_07160 65fff5879ee85c612b14dbe90230d572 161 SUPERFAMILY SSF55811 2 147 1.11E-29 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_07160 65fff5879ee85c612b14dbe90230d572 161 Pfam PF00293 NUDIX domain 7 127 1.4E-15 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_07160 65fff5879ee85c612b14dbe90230d572 161 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG60_07160 65fff5879ee85c612b14dbe90230d572 161 Gene3D G3DSA:3.90.79.10 1 153 7.2E-38 T 23-10-2018 CDG60_02050 5b84415081644b33f55416fc645c0ac8 89 Gene3D G3DSA:2.30.30.90 1 86 9.9E-25 T 23-10-2018 IPR038157 Ferrous iron transporter, core domain CDG60_02050 5b84415081644b33f55416fc645c0ac8 89 SUPERFAMILY SSF50037 4 82 1.83E-14 T 23-10-2018 IPR008988 Transcriptional repressor, C-terminal CDG60_02050 5b84415081644b33f55416fc645c0ac8 89 SMART SM00899 1 82 1.6E-18 T 23-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CDG60_02050 5b84415081644b33f55416fc645c0ac8 89 Pfam PF04023 FeoA domain 1 81 3.9E-16 T 23-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CDG60_08485 11c9d6822847181ccb177ffaef782f53 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 254 1.1E-49 T 23-10-2018 CDG60_08485 11c9d6822847181ccb177ffaef782f53 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 292 47.132 T 23-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CDG60_08485 11c9d6822847181ccb177ffaef782f53 294 SUPERFAMILY SSF51621 9 290 1.93E-99 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG60_08485 11c9d6822847181ccb177ffaef782f53 294 Gene3D G3DSA:3.20.20.60 5 294 1.8E-99 T 23-10-2018 CDG60_08485 11c9d6822847181ccb177ffaef782f53 294 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 23-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 CDG60_08485 11c9d6822847181ccb177ffaef782f53 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 291 2.9E-124 T 23-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CDG60_00555 5beb625f2f0337d3d8da96751692b191 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_00555 5beb625f2f0337d3d8da96751692b191 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_00555 5beb625f2f0337d3d8da96751692b191 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_00555 5beb625f2f0337d3d8da96751692b191 341 Gene3D G3DSA:3.30.420.10 172 334 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_13390 90c211c62b4a3bc159d9585347b98556 420 SUPERFAMILY SSF53448 45 323 9.21E-61 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_13390 90c211c62b4a3bc159d9585347b98556 420 Pfam PF13641 Glycosyltransferase like family 2 53 277 1.8E-36 T 23-10-2018 CDG60_13390 90c211c62b4a3bc159d9585347b98556 420 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 13 415 1.3E-181 T 23-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 CDG60_13390 90c211c62b4a3bc159d9585347b98556 420 Gene3D G3DSA:3.90.550.10 31 267 1.4E-42 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_10720 edb69a0189c7adbffdd31d404fd1d786 157 Gene3D G3DSA:3.30.70.920 56 140 2.7E-21 T 23-10-2018 CDG60_10720 edb69a0189c7adbffdd31d404fd1d786 157 SUPERFAMILY SSF46785 2 62 1.66E-9 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_10720 edb69a0189c7adbffdd31d404fd1d786 157 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 6.0E-18 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG60_10720 edb69a0189c7adbffdd31d404fd1d786 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 45 7.0E-9 T 23-10-2018 CDG60_10720 edb69a0189c7adbffdd31d404fd1d786 157 SUPERFAMILY SSF54909 65 144 6.03E-15 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_10720 edb69a0189c7adbffdd31d404fd1d786 157 Gene3D G3DSA:1.10.10.10 1 55 2.1E-9 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10720 edb69a0189c7adbffdd31d404fd1d786 157 SMART SM00344 3 112 2.4E-22 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 3.7E-93 T 23-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 SUPERFAMILY SSF54713 57 269 6.26E-43 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 Gene3D G3DSA:1.10.8.10 1 56 3.4E-24 T 23-10-2018 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 Pfam PF00889 Elongation factor TS 71 269 3.0E-60 T 23-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 23-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 Gene3D G3DSA:3.30.479.20 57 148 5.2E-25 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 Gene3D G3DSA:3.30.479.20 153 268 1.5E-36 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 72.431 T 23-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 SUPERFAMILY SSF46934 4 54 1.69E-17 T 23-10-2018 IPR009060 UBA-like superfamily GO:0005515 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 23-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG60_12480 c37ed22805d0b490e47e29c759ca651e 292 Gene3D G3DSA:1.10.286.20 188 234 1.5E-36 T 23-10-2018 CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 Gene3D G3DSA:3.40.50.2300 1 142 3.2E-43 T 23-10-2018 CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 SUPERFAMILY SSF52788 2 142 1.44E-39 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 138 7.9E-33 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 1.3E-17 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 98 111 1.3E-17 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.3E-17 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 1.3E-17 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 1.3E-17 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG60_01060 c278cefc249c67bebdb280d7340b471d 142 SMART SM00226 4 141 2.9E-52 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG60_18020 89f7d55728841f04537c8018d62cbe62 94 Gene3D G3DSA:3.40.630.30 3 94 3.3E-27 T 23-10-2018 CDG60_18020 89f7d55728841f04537c8018d62cbe62 94 Pfam PF14542 GCN5-related N-acetyl-transferase 14 92 6.0E-24 T 23-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CDG60_18020 89f7d55728841f04537c8018d62cbe62 94 SUPERFAMILY SSF55729 3 93 6.97E-26 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_10880 87985526bc1493af98d8392400db4dfd 494 Pfam PF00691 OmpA family 374 469 5.4E-23 T 23-10-2018 IPR006665 OmpA-like domain CDG60_10880 87985526bc1493af98d8392400db4dfd 494 SUPERFAMILY SSF103088 370 474 6.67E-32 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_10880 87985526bc1493af98d8392400db4dfd 494 Gene3D G3DSA:3.30.1330.60 339 483 4.5E-37 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_10880 87985526bc1493af98d8392400db4dfd 494 ProSitePatterns PS01068 OmpA-like domain. 407 451 - T 23-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CDG60_10880 87985526bc1493af98d8392400db4dfd 494 PRINTS PR01021 OMPA domain signature 375 397 8.9E-8 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_10880 87985526bc1493af98d8392400db4dfd 494 PRINTS PR01021 OMPA domain signature 420 436 8.9E-8 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_10880 87985526bc1493af98d8392400db4dfd 494 PRINTS PR01021 OMPA domain signature 405 420 8.9E-8 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_10880 87985526bc1493af98d8392400db4dfd 494 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 438 457 2.0E-9 T 23-10-2018 CDG60_10880 87985526bc1493af98d8392400db4dfd 494 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 458 478 2.0E-9 T 23-10-2018 CDG60_10880 87985526bc1493af98d8392400db4dfd 494 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 420 437 2.0E-9 T 23-10-2018 CDG60_10880 87985526bc1493af98d8392400db4dfd 494 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 229 247 2.0E-9 T 23-10-2018 CDG60_00970 68a813b763fc873927a3f34d0219f971 129 Pfam PF11776 Nickel/cobalt transporter regulator 76 125 9.5E-16 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG60_00970 68a813b763fc873927a3f34d0219f971 129 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 71 124 8.0E-20 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG60_00970 68a813b763fc873927a3f34d0219f971 129 Gene3D G3DSA:3.10.450.160 61 129 3.0E-13 T 23-10-2018 CDG60_04845 863480fb6a7aa3e84ac9e97e4277b1c0 246 SUPERFAMILY SSF53067 4 113 1.42E-19 T 23-10-2018 CDG60_04845 863480fb6a7aa3e84ac9e97e4277b1c0 246 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 238 1.0E-26 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDG60_04845 863480fb6a7aa3e84ac9e97e4277b1c0 246 Gene3D G3DSA:3.30.420.490 120 228 4.1E-50 T 23-10-2018 CDG60_04845 863480fb6a7aa3e84ac9e97e4277b1c0 246 Pfam PF03309 Type III pantothenate kinase 4 199 4.0E-41 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDG60_04845 863480fb6a7aa3e84ac9e97e4277b1c0 246 SUPERFAMILY SSF53067 119 241 2.68E-26 T 23-10-2018 CDG60_04845 863480fb6a7aa3e84ac9e97e4277b1c0 246 Gene3D G3DSA:3.30.420.40 6 235 4.1E-50 T 23-10-2018 CDG60_04845 863480fb6a7aa3e84ac9e97e4277b1c0 246 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 243 18.716 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDG60_17225 149172679505bddf307c801625109bc6 375 Gene3D G3DSA:3.20.20.30 11 367 8.6E-107 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_17225 149172679505bddf307c801625109bc6 375 Pfam PF00296 Luciferase-like monooxygenase 16 335 5.2E-72 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG60_17225 149172679505bddf307c801625109bc6 375 SUPERFAMILY SSF51679 12 362 7.85E-90 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_17225 149172679505bddf307c801625109bc6 375 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 15 364 3.6E-187 T 23-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 SUPERFAMILY SSF52317 1 192 6.97E-54 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_12975 22ee77642175f36ec62771083ee5a696 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 7.6E-53 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.0E-34 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.0E-34 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.0E-34 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.0E-34 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.0E-34 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.0E-34 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 5.4E-13 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.4E-13 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.4E-13 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.2E-5 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.2E-5 T 23-10-2018 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.1E-82 T 23-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG60_12975 22ee77642175f36ec62771083ee5a696 194 Gene3D G3DSA:3.40.50.880 1 193 1.3E-60 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_03685 4266f5b2570245005e10643a1b266233 306 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 41 59 - T 23-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CDG60_03685 4266f5b2570245005e10643a1b266233 306 TIGRFAM TIGR01138 cysM: cysteine synthase B 16 300 1.1E-139 T 23-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG60_03685 4266f5b2570245005e10643a1b266233 306 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 300 1.1E-117 T 23-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG60_03685 4266f5b2570245005e10643a1b266233 306 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 289 1.0E-66 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG60_03685 4266f5b2570245005e10643a1b266233 306 SUPERFAMILY SSF53686 14 297 4.85E-90 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG60_03685 4266f5b2570245005e10643a1b266233 306 Gene3D G3DSA:3.40.50.1100 19 296 1.9E-106 T 23-10-2018 CDG60_03685 4266f5b2570245005e10643a1b266233 306 Gene3D G3DSA:3.40.50.1100 46 161 1.9E-106 T 23-10-2018 CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 SUPERFAMILY SSF52540 5 169 1.34E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 Pfam PF07664 Ferrous iron transport protein B C terminus 396 448 1.4E-14 T 23-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 Pfam PF02421 Ferrous iron transport protein B 6 163 9.0E-55 T 23-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 Gene3D G3DSA:3.40.50.300 5 203 5.7E-43 T 23-10-2018 CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 1.5E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 1.5E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 Pfam PF07670 Nucleoside recognition 285 376 8.7E-12 T 23-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CDG60_02055 6786eca1218f82efc2ab2321c7fcd247 620 Pfam PF07670 Nucleoside recognition 453 589 9.6E-24 T 23-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CDG60_13005 79ea2c7723d7ab25d714b3682b7864c0 184 Gene3D G3DSA:1.10.286.10 1 49 1.5E-17 T 23-10-2018 CDG60_13005 79ea2c7723d7ab25d714b3682b7864c0 184 SUPERFAMILY SSF55620 2 180 1.56E-72 T 23-10-2018 CDG60_13005 79ea2c7723d7ab25d714b3682b7864c0 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 34.728 T 23-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG60_13005 79ea2c7723d7ab25d714b3682b7864c0 184 Gene3D G3DSA:3.30.1130.10 51 183 2.3E-58 T 23-10-2018 CDG60_13005 79ea2c7723d7ab25d714b3682b7864c0 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 23-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG60_13005 79ea2c7723d7ab25d714b3682b7864c0 184 Pfam PF01227 GTP cyclohydrolase I 4 179 2.3E-72 T 23-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG60_13005 79ea2c7723d7ab25d714b3682b7864c0 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 3 180 2.7E-70 T 23-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG60_08910 da0ebfc23a89df8bc7728d297427ecb6 208 SMART SM00855 4 163 1.4E-7 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG60_08910 da0ebfc23a89df8bc7728d297427ecb6 208 Gene3D G3DSA:3.40.50.1240 3 206 1.8E-42 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_08910 da0ebfc23a89df8bc7728d297427ecb6 208 PIRSF PIRSF000709 1 201 9.3E-8 T 23-10-2018 CDG60_08910 da0ebfc23a89df8bc7728d297427ecb6 208 SUPERFAMILY SSF53254 3 190 2.55E-41 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_08910 da0ebfc23a89df8bc7728d297427ecb6 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 188 7.7E-41 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG60_13640 152f0532304ea5a88f0fbc8870db05bb 128 SUPERFAMILY SSF52172 7 127 2.28E-37 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_13640 152f0532304ea5a88f0fbc8870db05bb 128 SMART SM00448 9 122 3.3E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_13640 152f0532304ea5a88f0fbc8870db05bb 128 Gene3D G3DSA:3.40.50.12740 8 128 2.4E-39 T 23-10-2018 CDG60_13640 152f0532304ea5a88f0fbc8870db05bb 128 Pfam PF00072 Response regulator receiver domain 11 123 1.1E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 PIRSF PIRSF000726 1 62 1.3E-20 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 PIRSF PIRSF000726 53 422 6.6E-136 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 Pfam PF00696 Amino acid kinase family 3 229 2.2E-51 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 SUPERFAMILY SSF53633 4 254 3.4E-76 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 Gene3D G3DSA:3.40.1160.10 1 257 4.8E-87 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 SUPERFAMILY SSF55021 342 416 2.04E-25 T 23-10-2018 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 Gene3D G3DSA:3.30.2130.10 258 424 3.1E-60 T 23-10-2018 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 8.5E-131 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 Pfam PF01842 ACT domain 279 335 8.7E-10 T 23-10-2018 IPR002912 ACT domain CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 Pfam PF13840 ACT domain 348 410 4.1E-18 T 23-10-2018 IPR027795 CASTOR, ACT domain CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 SUPERFAMILY SSF55021 260 337 1.19E-17 T 23-10-2018 CDG60_11050 109f5da7fceaf2b9696a19c683b7fd55 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 414 3.7E-111 T 23-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG60_08985 a557a0c5e9fba924f661786aef26de52 253 Gene3D G3DSA:3.10.450.70 30 97 7.5E-19 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG60_08985 a557a0c5e9fba924f661786aef26de52 253 SUPERFAMILY SSF52833 97 244 5.72E-27 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_08985 a557a0c5e9fba924f661786aef26de52 253 Gene3D G3DSA:3.40.30.10 112 253 5.4E-34 T 23-10-2018 CDG60_08985 a557a0c5e9fba924f661786aef26de52 253 Pfam PF13098 Thioredoxin-like domain 123 234 3.0E-12 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG60_08985 a557a0c5e9fba924f661786aef26de52 253 SUPERFAMILY SSF54423 30 85 2.22E-10 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG60_02095 1f76fe3eeb7014ad765027b66a37ba24 206 Gene3D G3DSA:3.90.79.10 3 202 1.3E-47 T 23-10-2018 CDG60_02095 1f76fe3eeb7014ad765027b66a37ba24 206 SUPERFAMILY SSF55811 9 201 4.6E-37 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_02095 1f76fe3eeb7014ad765027b66a37ba24 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 197 6.5E-39 T 23-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CDG60_02095 1f76fe3eeb7014ad765027b66a37ba24 206 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG60_02095 1f76fe3eeb7014ad765027b66a37ba24 206 Pfam PF00293 NUDIX domain 55 175 3.3E-9 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_13625 0fa960c606fe9492b53c8570607bd303 690 SMART SM00283 426 687 9.7E-88 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDG60_13625 0fa960c606fe9492b53c8570607bd303 690 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 655 6.6E-41 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDG60_13625 0fa960c606fe9492b53c8570607bd303 690 Gene3D G3DSA:1.10.287.950 363 689 4.3E-63 T 23-10-2018 CDG60_13625 0fa960c606fe9492b53c8570607bd303 690 SUPERFAMILY SSF58104 386 688 1.74E-68 T 23-10-2018 CDG60_13625 0fa960c606fe9492b53c8570607bd303 690 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 553 582 3.7E-7 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDG60_13625 0fa960c606fe9492b53c8570607bd303 690 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 3.7E-7 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDG60_14425 28bee4eab88dd712c519b5c6d83e0b4a 238 Gene3D G3DSA:3.90.226.10 23 225 4.8E-20 T 23-10-2018 CDG60_14425 28bee4eab88dd712c519b5c6d83e0b4a 238 SUPERFAMILY SSF52096 66 201 7.36E-17 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_14425 28bee4eab88dd712c519b5c6d83e0b4a 238 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 6 235 3.0E-57 T 23-10-2018 CDG60_14425 28bee4eab88dd712c519b5c6d83e0b4a 238 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 5 237 2.5E-72 T 23-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 CDG60_15355 6255bd789298d9b18c075fb02b49dabd 104 SMART SM00450 3 99 1.2E-8 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_15355 6255bd789298d9b18c075fb02b49dabd 104 SUPERFAMILY SSF52821 14 103 1.57E-16 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_15355 6255bd789298d9b18c075fb02b49dabd 104 Pfam PF00581 Rhodanese-like domain 16 90 2.5E-7 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_15355 6255bd789298d9b18c075fb02b49dabd 104 Gene3D G3DSA:3.40.250.10 12 104 2.7E-16 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_17555 bf6a3af44e3f8bce064c18e918e62d56 331 SMART SM00342 244 326 2.0E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_17555 bf6a3af44e3f8bce064c18e918e62d56 331 SUPERFAMILY SSF46689 279 328 2.55E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17555 bf6a3af44e3f8bce064c18e918e62d56 331 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 198 8.9E-32 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_17555 bf6a3af44e3f8bce064c18e918e62d56 331 Gene3D G3DSA:1.10.10.60 224 331 6.3E-22 T 23-10-2018 CDG60_17555 bf6a3af44e3f8bce064c18e918e62d56 331 Pfam PF12833 Helix-turn-helix domain 250 328 7.1E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 Gene3D G3DSA:1.10.357.10 52 185 2.4E-22 T 23-10-2018 CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 Pfam PF16859 Bacterial transcriptional repressor C-terminal 83 178 6.1E-17 T 23-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 4.5E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 SUPERFAMILY SSF48498 91 183 6.67E-17 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 SUPERFAMILY SSF46689 5 69 4.1E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.8E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.8E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13480 c8aa52507e2367283c70550e5e27c09b 185 Gene3D G3DSA:1.10.10.60 3 51 9.2E-17 T 23-10-2018 CDG60_00310 f2abcb6adc981f6a92b2f75f79a1aee4 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_00310 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_00310 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_00310 f2abcb6adc981f6a92b2f75f79a1aee4 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_01960 162921ae11b81b3798a039f4948d3245 219 Gene3D G3DSA:2.40.30.20 1 88 2.0E-26 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01960 162921ae11b81b3798a039f4948d3245 219 Pfam PF00677 Lumazine binding domain 99 183 2.6E-23 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01960 162921ae11b81b3798a039f4948d3245 219 Pfam PF00677 Lumazine binding domain 3 86 8.2E-21 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01960 162921ae11b81b3798a039f4948d3245 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 7.3E-63 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01960 162921ae11b81b3798a039f4948d3245 219 SUPERFAMILY SSF63380 1 88 6.89E-26 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_01960 162921ae11b81b3798a039f4948d3245 219 Gene3D G3DSA:2.40.30.20 101 204 2.5E-34 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_01960 162921ae11b81b3798a039f4948d3245 219 SUPERFAMILY SSF63380 92 193 1.11E-30 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_01960 162921ae11b81b3798a039f4948d3245 219 PIRSF PIRSF000498 1 212 1.1E-75 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 1402 1494 6.54E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:2.150.10.10 138 306 4.9E-30 T 23-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 428 555 4.58E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 736 823 4.32E-6 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 562 689 1.96E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF54523 2121 2211 9.73E-15 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 1683 1765 7.59E-6 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 2001 2034 3.4E-14 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 496 533 4.6E-17 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 1569 1608 1.0E-14 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 1435 1474 5.0E-15 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 1165 1204 7.1E-15 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 755 805 6.2E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 1865 1902 1.2E-13 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 363 400 3.7E-17 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 1695 1742 2.0E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 901 937 1.7E-12 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 629 668 8.6E-16 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.390.90 1032 1069 1.1E-15 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 807 830 8.5E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 669 694 2.8E-9 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 1342 1366 1.7E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 1476 1500 2.8E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 1206 1231 8.0E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 1610 1635 3.0E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 992 1091 2.48E-6 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 1098 1224 1.31E-6 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 5.6E-10 T 23-10-2018 IPR024973 ESPR domain CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF03895 YadA-like membrane anchor domain 2155 2211 2.6E-7 T 23-10-2018 IPR005594 YadA-like, C-terminal CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 938 983 1.6E-6 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:2.20.25.490 1804 1859 5.7E-9 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:2.20.25.490 307 362 2.4E-11 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:2.20.25.490 1233 1290 4.5E-8 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:2.20.25.490 1637 1694 1.7E-8 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 1536 1628 1.09E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 155 307 6.02E-26 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 350 422 5.23E-9 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 397 441 1.2E-7 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1199 1238 2.9E-8 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1469 1511 3.0E-8 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1739 1783 1.3E-9 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 802 839 2.0E-7 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1898 1940 6.5E-4 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1066 1107 3.2E-8 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2036 2073 4.5E-4 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 530 574 2.0E-9 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1603 1642 5.8E-9 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 663 703 1.6E-10 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1335 1377 1.5E-7 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 932 974 7.9E-8 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 285 326 1.9E-9 T 23-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:3.30.1300.30 2139 2213 2.1E-8 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 534 578 4.0E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 401 445 5.1E-7 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 1743 1799 1.4E-8 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 1070 1110 2.9E-6 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Gene3D G3DSA:1.20.5.170 2035 2138 9.3E-16 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 SUPERFAMILY SSF101967 868 957 2.35E-8 T 23-10-2018 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05658 Head domain of trimeric autotransporter adhesin 159 182 2.2E-5 T 23-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05658 Head domain of trimeric autotransporter adhesin 85 107 1.9E-5 T 23-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05658 Head domain of trimeric autotransporter adhesin 232 257 1.0E-5 T 23-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_17840 b314615f58e4a9e16d63ed93a8883983 2215 Pfam PF05658 Head domain of trimeric autotransporter adhesin 201 227 3.3E-4 T 23-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CDG60_06480 d77b3a8eea2aaf68a02cd1dd8961b85e 197 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 5.7E-27 T 23-10-2018 IPR000182 GNAT domain CDG60_06480 d77b3a8eea2aaf68a02cd1dd8961b85e 197 SUPERFAMILY SSF55729 3 175 1.63E-33 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_06480 d77b3a8eea2aaf68a02cd1dd8961b85e 197 Gene3D G3DSA:3.40.630.30 1 161 1.4E-35 T 23-10-2018 CDG60_04750 d746221061d71233868650413b4c0287 221 SUPERFAMILY SSF55120 13 216 9.28E-58 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_04750 d746221061d71233868650413b4c0287 221 Pfam PF00849 RNA pseudouridylate synthase 24 171 2.5E-27 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_04750 d746221061d71233868650413b4c0287 221 Gene3D G3DSA:3.30.2350.10 7 219 1.2E-63 T 23-10-2018 CDG60_12415 be4c0149650f5cc81d23eceb55df6ce5 311 SUPERFAMILY SSF52540 4 228 1.23E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12415 be4c0149650f5cc81d23eceb55df6ce5 311 SMART SM00382 30 213 4.5E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_12415 be4c0149650f5cc81d23eceb55df6ce5 311 Gene3D G3DSA:3.40.50.300 1 235 8.6E-65 T 23-10-2018 CDG60_12415 be4c0149650f5cc81d23eceb55df6ce5 311 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_12415 be4c0149650f5cc81d23eceb55df6ce5 311 Pfam PF00005 ABC transporter 21 165 7.3E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_15825 c282c4f4b3851d4e59ce2561d0000c6b 731 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 310 721 3.3E-16 T 23-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 SMART SM00116 312 359 9.7E-9 T 23-10-2018 IPR000644 CBS domain CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 SMART SM00116 244 292 1.9 T 23-10-2018 IPR000644 CBS domain CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 Gene3D G3DSA:3.10.580.10 200 293 7.7E-10 T 23-10-2018 CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 SUPERFAMILY SSF54631 235 358 1.61E-24 T 23-10-2018 CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 Pfam PF04982 HPP family 54 173 2.7E-38 T 23-10-2018 IPR007065 HPP CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 Pfam PF00571 CBS domain 239 289 6.5E-5 T 23-10-2018 IPR000644 CBS domain CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 Pfam PF00571 CBS domain 305 358 1.7E-10 T 23-10-2018 IPR000644 CBS domain CDG60_02895 6720215ac9127f91bf577ce61bdb5613 368 Gene3D G3DSA:3.10.580.10 294 363 4.4E-13 T 23-10-2018 CDG60_13590 dd4bfe2487f83fd75a5aef5788666d7b 167 SUPERFAMILY SSF141523 6 160 2.75E-22 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG60_13590 dd4bfe2487f83fd75a5aef5788666d7b 167 Gene3D G3DSA:2.40.440.10 2 166 7.6E-22 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG60_13590 dd4bfe2487f83fd75a5aef5788666d7b 167 Pfam PF03734 L,D-transpeptidase catalytic domain 10 160 3.4E-14 T 23-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDG60_05145 6f30e060ad879bb3a8af9989126c5042 234 Pfam PF01569 PAP2 superfamily 101 216 2.3E-8 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG60_05145 6f30e060ad879bb3a8af9989126c5042 234 SUPERFAMILY SSF48317 34 217 9.65E-12 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 Gene3D G3DSA:3.40.50.300 195 388 3.5E-75 T 23-10-2018 CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 Hamap MF_00983 Probable primosomal protein N' [priA]. 16 739 24.209 T 23-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 Gene3D G3DSA:1.10.8.630 13 125 8.3E-31 T 23-10-2018 CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 SUPERFAMILY SSF52540 470 620 1.68E-18 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 SMART SM00487 204 401 2.2E-18 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 SMART SM00490 502 599 4.2E-4 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 Pfam PF00270 DEAD/DEAH box helicase 211 371 1.1E-14 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 SUPERFAMILY SSF52540 205 379 5.81E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02725 7af96214d4bebb35ed10dc949bef4fc0 740 TIGRFAM TIGR00595 priA: primosomal protein N' 230 736 4.1E-181 T 23-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 Gene3D G3DSA:3.40.140.10 1 144 1.0E-44 T 23-10-2018 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 352 8.0E-113 T 23-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 Pfam PF01872 RibD C-terminal domain 151 351 2.0E-40 T 23-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 103 1.0E-17 T 23-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 SUPERFAMILY SSF53597 148 353 3.14E-50 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 Gene3D G3DSA:3.40.430.10 145 362 7.2E-70 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 PIRSF PIRSF006769 2 359 1.8E-118 T 23-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 355 1.9E-50 T 23-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CDG60_01950 daa1a5f3beb681e9e99515e894907b97 362 SUPERFAMILY SSF53927 7 147 4.09E-46 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG60_09555 78b0bf9046be0b7ee972025a9f0f419f 463 Pfam PF02219 Methylenetetrahydrofolate reductase 63 264 6.5E-24 T 23-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CDG60_09555 78b0bf9046be0b7ee972025a9f0f419f 463 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 360 440 4.3E-18 T 23-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal CDG60_09555 78b0bf9046be0b7ee972025a9f0f419f 463 SUPERFAMILY SSF51730 2 266 1.12E-39 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like CDG60_09555 78b0bf9046be0b7ee972025a9f0f419f 463 Gene3D G3DSA:3.20.20.220 10 277 2.7E-32 T 23-10-2018 CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 Gene3D G3DSA:3.40.190.10 167 266 8.4E-83 T 23-10-2018 CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.4E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 Gene3D G3DSA:3.40.190.10 91 301 8.4E-83 T 23-10-2018 CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 Pfam PF03466 LysR substrate binding domain 91 280 6.0E-39 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 Gene3D G3DSA:1.10.10.10 1 86 8.8E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 SUPERFAMILY SSF46785 2 112 1.06E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_06835 4fbf9fbf80256e2da152c844ce6ca8d2 307 SUPERFAMILY SSF53850 92 293 5.18E-40 T 23-10-2018 CDG60_15875 d62d98601d5b7b74164ddb0d4040b590 128 SUPERFAMILY SSF53137 15 128 5.89E-47 T 23-10-2018 CDG60_15875 d62d98601d5b7b74164ddb0d4040b590 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 3.1E-54 T 23-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15875 d62d98601d5b7b74164ddb0d4040b590 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 23-10-2018 IPR018102 Ribosomal S11, conserved site CDG60_15875 d62d98601d5b7b74164ddb0d4040b590 128 Pfam PF00411 Ribosomal protein S11 18 127 3.5E-50 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDG60_15875 d62d98601d5b7b74164ddb0d4040b590 128 Gene3D G3DSA:3.30.420.80 1 128 5.2E-54 T 23-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15875 d62d98601d5b7b74164ddb0d4040b590 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 32.395 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDG60_15875 d62d98601d5b7b74164ddb0d4040b590 128 PIRSF PIRSF002131 1 128 1.3E-51 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 Gene3D G3DSA:3.40.50.80 200 339 1.8E-28 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 SUPERFAMILY SSF63380 105 199 4.89E-28 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 SUPERFAMILY SSF54292 2 89 1.57E-29 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 Pfam PF00970 Oxidoreductase FAD-binding domain 107 198 1.3E-18 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 82 1.3E-17 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 Gene3D G3DSA:3.10.20.30 1 95 1.7E-26 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 1.9E-33 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 1.9E-33 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 202 1.9E-33 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 1.9E-33 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 302 310 1.9E-33 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 1.9E-33 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 Gene3D G3DSA:2.40.30.10 104 199 3.5E-29 T 23-10-2018 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 Pfam PF00175 Oxidoreductase NAD-binding domain 210 315 1.8E-15 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_14320 f9e0e58225d2e0254ec22c20491e922e 353 SUPERFAMILY SSF52343 187 332 2.88E-34 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_14215 2428428ca8f95afb94a5884b031419a7 146 Pfam PF13279 Thioesterase-like superfamily 13 125 1.2E-18 T 23-10-2018 CDG60_14215 2428428ca8f95afb94a5884b031419a7 146 SUPERFAMILY SSF54637 7 132 4.46E-31 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_14215 2428428ca8f95afb94a5884b031419a7 146 Gene3D G3DSA:3.10.129.10 3 133 4.0E-38 T 23-10-2018 CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 3.1E-11 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 3.3E-9 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 3.3E-9 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 SUPERFAMILY SSF54523 8 118 3.45E-23 T 23-10-2018 CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 119 1.6E-9 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 3.5E-11 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 Gene3D G3DSA:3.30.700.10 8 141 2.0E-23 T 23-10-2018 CDG60_16510 4ab7699cc0639eaf3c48fb5cd1f21e6a 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 Gene3D G3DSA:3.30.465.10 350 429 1.2E-29 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 Pfam PF03471 Transporter associated domain 350 427 2.2E-20 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 Pfam PF01595 Domain of unknown function DUF21 8 199 8.8E-38 T 23-10-2018 IPR002550 CNNM, transmembrane domain CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 Gene3D G3DSA:3.10.580.10 195 349 1.1E-33 T 23-10-2018 CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 Pfam PF00571 CBS domain 288 331 1.1E-5 T 23-10-2018 IPR000644 CBS domain CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 SMART SM01091 349 429 6.7E-28 T 23-10-2018 IPR005170 Transporter-associated domain CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 SUPERFAMILY SSF54631 201 336 1.83E-22 T 23-10-2018 CDG60_12795 7071b8cad08bc37a9cde88d035e9e156 441 SUPERFAMILY SSF56176 347 434 3.0E-22 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_09255 bfca90e91f020615a18008243c2098ea 332 Gene3D G3DSA:3.40.50.1100 58 160 7.4E-120 T 23-10-2018 CDG60_09255 bfca90e91f020615a18008243c2098ea 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 1.8E-63 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG60_09255 bfca90e91f020615a18008243c2098ea 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 23-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CDG60_09255 bfca90e91f020615a18008243c2098ea 332 Gene3D G3DSA:3.40.50.1100 25 321 7.4E-120 T 23-10-2018 CDG60_09255 bfca90e91f020615a18008243c2098ea 332 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 326 9.5E-130 T 23-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG60_09255 bfca90e91f020615a18008243c2098ea 332 SUPERFAMILY SSF53686 18 325 3.67E-94 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG60_09255 bfca90e91f020615a18008243c2098ea 332 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 326 3.4E-124 T 23-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG60_11445 e286092da8068d48d5873a93210c8d0d 200 Gene3D G3DSA:3.30.70.2540 1 200 1.1E-68 T 23-10-2018 CDG60_11445 e286092da8068d48d5873a93210c8d0d 200 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 200 2.4E-41 T 23-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 CDG60_11445 e286092da8068d48d5873a93210c8d0d 200 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 5 200 2.8E-59 T 23-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 CDG60_16605 bed68c8f82f03c2c9be0f4f23c884ba6 84 Gene3D G3DSA:1.10.1220.170 41 84 1.9E-14 T 23-10-2018 CDG60_16605 bed68c8f82f03c2c9be0f4f23c884ba6 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 56 2.4E-8 T 23-10-2018 CDG60_16605 bed68c8f82f03c2c9be0f4f23c884ba6 84 SUPERFAMILY SSF143120 1 77 3.66E-21 T 23-10-2018 IPR036165 YefM-like superfamily CDG60_16605 bed68c8f82f03c2c9be0f4f23c884ba6 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 1.3E-18 T 23-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDG60_16605 bed68c8f82f03c2c9be0f4f23c884ba6 84 Gene3D G3DSA:3.40.1620.10 1 40 6.3E-10 T 23-10-2018 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 PIRSF PIRSF000729 10 377 4.1E-131 T 23-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 Gene3D G3DSA:2.30.130.10 275 377 4.1E-31 T 23-10-2018 IPR036974 PUA domain superfamily GO:0003723 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 SMART SM00359 286 360 2.2E-16 T 23-10-2018 IPR002478 PUA domain GO:0003723 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 Gene3D G3DSA:3.40.1160.10 5 274 4.8E-94 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 7.4E-48 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 7.4E-48 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 7.4E-48 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 7.4E-48 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 7.4E-48 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 35.759 T 23-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 Pfam PF00696 Amino acid kinase family 15 244 3.2E-47 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 SUPERFAMILY SSF53633 15 265 1.17E-72 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 SUPERFAMILY SSF88697 286 376 3.28E-20 T 23-10-2018 IPR015947 PUA-like superfamily CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 375 4.7E-129 T 23-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 Pfam PF01472 PUA domain 286 360 3.4E-22 T 23-10-2018 IPR002478 PUA domain GO:0003723 CDG60_07065 6cea5baf6def571b907aab67af343ef3 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 23-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 Pfam PF00344 SecY translocase 81 423 3.3E-112 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 27 435 4.5E-125 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PIRSF PIRSF004557 9 445 3.7E-121 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 Gene3D G3DSA:1.10.3370.10 12 435 1.6E-157 T 23-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 80 100 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 1.4E-92 T 23-10-2018 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 ProSitePatterns PS00755 Protein secY signature 1. 81 100 - T 23-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 439 28.501 T 23-10-2018 IPR026593 Protein translocase subunit SecY CDG60_15890 6812aa8ece628ac1d6cdb0079cde95c4 450 SUPERFAMILY SSF103491 9 430 3.92E-127 T 23-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 Pfam PF03958 Bacterial type II/III secretion system short domain 268 394 2.8E-12 T 23-10-2018 IPR005644 NolW-like CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 Pfam PF03958 Bacterial type II/III secretion system short domain 193 261 9.4E-14 T 23-10-2018 IPR005644 NolW-like CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 Pfam PF03958 Bacterial type II/III secretion system short domain 129 185 3.3E-8 T 23-10-2018 IPR005644 NolW-like CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 Gene3D G3DSA:3.30.1370.120 191 258 3.0E-16 T 23-10-2018 IPR038591 NolW-like superfamily CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 Gene3D G3DSA:3.30.1370.120 25 186 8.3E-52 T 23-10-2018 IPR038591 NolW-like superfamily CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 Pfam PF00263 Bacterial type II and III secretion system protein 486 649 1.6E-48 T 23-10-2018 IPR004846 Type II/III secretion system GO:0009306 CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 614 632 5.2E-33 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 506 5.2E-33 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 517 527 5.2E-33 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 637 651 5.2E-33 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 PRINTS PR00811 Bacterial general secretion pathway protein D signature 394 404 5.2E-33 T 23-10-2018 IPR001775 GspD/PilQ family CDG60_02180 907ca3b126f0627ccee75ca09364eb32 759 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 659 2.9E-163 T 23-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CDG60_08695 ef50396bc2de8175be76e3651d95851e 151 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 13 113 5.4E-11 T 23-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CDG60_08695 ef50396bc2de8175be76e3651d95851e 151 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 9 145 3.8E-18 T 23-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 9 512 48.312 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 511 2.9E-217 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 SUPERFAMILY SSF64158 82 310 1.96E-80 T 23-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 Gene3D G3DSA:3.40.1450.10 82 312 1.2E-203 T 23-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 87 299 2.7E-76 T 23-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 Pfam PF01676 Metalloenzyme superfamily 11 499 3.4E-75 T 23-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 Gene3D G3DSA:3.40.720.10 10 509 1.2E-203 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 PIRSF PIRSF001492 4 514 1.1E-192 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG60_02000 ba77cb3dd9a38c4abc72f770a0246ada 515 SUPERFAMILY SSF53649 11 511 3.14E-68 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_14960 d1d37a79cade12a3729032c093144688 422 SMART SM00357 52 118 5.8E-19 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG60_14960 d1d37a79cade12a3729032c093144688 422 SMART SM00959 5 47 8.6E-17 T 23-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CDG60_14960 d1d37a79cade12a3729032c093144688 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.6E-23 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_14960 d1d37a79cade12a3729032c093144688 422 SUPERFAMILY SSF50249 48 125 1.33E-28 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_14960 d1d37a79cade12a3729032c093144688 422 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.1E-32 T 23-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CDG60_14960 d1d37a79cade12a3729032c093144688 422 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-15 T 23-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CDG60_14960 d1d37a79cade12a3729032c093144688 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.3E-211 T 23-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CDG60_14960 d1d37a79cade12a3729032c093144688 422 SMART SM00382 170 355 6.5E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_14960 d1d37a79cade12a3729032c093144688 422 Gene3D G3DSA:3.40.50.300 130 417 4.5E-129 T 23-10-2018 CDG60_14960 d1d37a79cade12a3729032c093144688 422 Gene3D G3DSA:1.10.720.10 1 46 4.1E-20 T 23-10-2018 CDG60_14960 d1d37a79cade12a3729032c093144688 422 SUPERFAMILY SSF52540 90 370 9.29E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14960 d1d37a79cade12a3729032c093144688 422 SUPERFAMILY SSF68912 1 46 2.2E-11 T 23-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily CDG60_14960 d1d37a79cade12a3729032c093144688 422 Gene3D G3DSA:2.40.50.140 47 123 4.6E-34 T 23-10-2018 CDG60_14960 d1d37a79cade12a3729032c093144688 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 242.547 T 23-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CDG60_15255 53b186237364e8225617f65df162c808 473 Gene3D G3DSA:2.20.200.10 105 350 3.4E-107 T 23-10-2018 CDG60_15255 53b186237364e8225617f65df162c808 473 Gene3D G3DSA:1.20.1600.10 58 460 3.4E-107 T 23-10-2018 CDG60_15255 53b186237364e8225617f65df162c808 473 Pfam PF02321 Outer membrane efflux protein 279 459 1.9E-25 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_15255 53b186237364e8225617f65df162c808 473 Pfam PF02321 Outer membrane efflux protein 68 251 1.6E-19 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_15255 53b186237364e8225617f65df162c808 473 SUPERFAMILY SSF56954 3 461 1.12E-90 T 23-10-2018 CDG60_15255 53b186237364e8225617f65df162c808 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 460 5.2E-88 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 1.1E-17 T 23-10-2018 CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 1.0E-19 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 SUPERFAMILY SSF46785 3 62 1.53E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 Gene3D G3DSA:1.10.10.10 1 55 7.5E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.6E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.6E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.6E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 SMART SM00344 4 113 2.3E-45 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 SUPERFAMILY SSF54909 66 151 1.47E-17 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_04480 7886bc35eb442e49712536c2cfd0db86 154 Gene3D G3DSA:3.30.70.920 56 148 1.4E-22 T 23-10-2018 CDG60_10725 012da0be4fc909e7df8f0f191348bd36 254 Pfam PF14497 Glutathione S-transferase, C-terminal domain 161 227 2.1E-5 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG60_10725 012da0be4fc909e7df8f0f191348bd36 254 SUPERFAMILY SSF47616 138 209 9.88E-10 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG60_10725 012da0be4fc909e7df8f0f191348bd36 254 Gene3D G3DSA:1.20.1050.10 126 233 6.8E-7 T 23-10-2018 CDG60_10725 012da0be4fc909e7df8f0f191348bd36 254 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 3.3E-16 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_10725 012da0be4fc909e7df8f0f191348bd36 254 SUPERFAMILY SSF52833 2 94 3.03E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_10725 012da0be4fc909e7df8f0f191348bd36 254 Gene3D G3DSA:3.40.30.10 2 103 1.2E-14 T 23-10-2018 CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 Pfam PF00206 Lyase 12 309 5.5E-65 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 328 445 7.3E-45 T 23-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 Gene3D G3DSA:1.20.200.10 116 446 4.3E-146 T 23-10-2018 CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 455 1.3E-129 T 23-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 1.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 1.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 1.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 1.7E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 Gene3D G3DSA:1.10.275.10 1 115 8.2E-48 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 SUPERFAMILY SSF48557 8 455 3.93E-104 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 Gene3D G3DSA:1.10.40.30 379 445 4.3E-146 T 23-10-2018 CDG60_07145 cb61087e5add0371bb858a92ccc1451b 462 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG60_00580 d06748ddb91a6565b84307ec005bfa65 156 SUPERFAMILY SSF51215 19 148 6.54E-19 T 23-10-2018 IPR037923 Transcription regulator HTH-like CDG60_00580 d06748ddb91a6565b84307ec005bfa65 156 Pfam PF02311 AraC-like ligand binding domain 14 146 2.3E-20 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG60_15680 94032ade1cf745a0f347ba068098b38f 737 Pfam PF05787 Bacterial protein of unknown function (DUF839) 80 690 1.2E-135 T 23-10-2018 IPR008557 Protein of unknown function DUF839 CDG60_15680 94032ade1cf745a0f347ba068098b38f 737 SUPERFAMILY SSF63829 495 691 3.6E-7 T 23-10-2018 CDG60_04690 2bc8fbb7c48c473329a07b5d7205af82 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 224 2.0E-74 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG60_04690 2bc8fbb7c48c473329a07b5d7205af82 228 PIRSF PIRSF004848 1 228 3.0E-75 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG60_04690 2bc8fbb7c48c473329a07b5d7205af82 228 SUPERFAMILY SSF51419 2 222 3.27E-75 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_04690 2bc8fbb7c48c473329a07b5d7205af82 228 Pfam PF01168 Alanine racemase, N-terminal domain 12 224 2.5E-28 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_04690 2bc8fbb7c48c473329a07b5d7205af82 228 Gene3D G3DSA:3.20.20.10 1 227 4.6E-81 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_04690 2bc8fbb7c48c473329a07b5d7205af82 228 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG60_04690 2bc8fbb7c48c473329a07b5d7205af82 228 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 223 31.075 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG60_17565 e7cf1bde01eddb2af9cd70b5d538cd35 384 Gene3D G3DSA:3.40.640.10 41 280 6.6E-129 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_17565 e7cf1bde01eddb2af9cd70b5d538cd35 384 Gene3D G3DSA:3.90.1150.10 17 379 6.6E-129 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_17565 e7cf1bde01eddb2af9cd70b5d538cd35 384 SUPERFAMILY SSF53383 3 382 3.46E-98 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_17565 e7cf1bde01eddb2af9cd70b5d538cd35 384 Pfam PF00155 Aminotransferase class I and II 29 370 4.9E-60 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_07290 2f96e58e106b8f58730e8d57898e8441 669 Pfam PF01841 Transglutaminase-like superfamily 378 473 1.9E-22 T 23-10-2018 IPR002931 Transglutaminase-like CDG60_07290 2f96e58e106b8f58730e8d57898e8441 669 Gene3D G3DSA:3.10.620.30 314 496 2.2E-22 T 23-10-2018 CDG60_07290 2f96e58e106b8f58730e8d57898e8441 669 Pfam PF11992 Domain of unknown function (DUF3488) 10 305 1.6E-69 T 23-10-2018 IPR021878 Protein of unknown function DUF3488 CDG60_07290 2f96e58e106b8f58730e8d57898e8441 669 SMART SM00460 405 475 1.2E-19 T 23-10-2018 IPR002931 Transglutaminase-like CDG60_07290 2f96e58e106b8f58730e8d57898e8441 669 SUPERFAMILY SSF54001 344 568 3.36E-48 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CDG60_14170 f814dc76491ad3fe99e0d13e1b3467a9 241 Gene3D G3DSA:3.50.30.100 3 204 1.7E-53 T 23-10-2018 CDG60_14170 f814dc76491ad3fe99e0d13e1b3467a9 241 SUPERFAMILY SSF89562 14 194 1.23E-40 T 23-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CDG60_14170 f814dc76491ad3fe99e0d13e1b3467a9 241 Pfam PF03737 Aldolase/RraA 18 183 3.6E-36 T 23-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 SUPERFAMILY SSF51569 20 328 2.93E-98 T 23-10-2018 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 SMART SM00917 422 553 1.1E-21 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 554 51.505 T 23-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 552 1.6E-235 T 23-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 Gene3D G3DSA:3.30.160.270 377 552 2.4E-47 T 23-10-2018 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 Pfam PF08502 LeuA allosteric (dimerisation) domain 424 550 1.4E-18 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 Gene3D G3DSA:3.20.20.70 9 376 1.4E-155 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 SUPERFAMILY SSF89000 388 436 6.67E-14 T 23-10-2018 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 SUPERFAMILY SSF110921 444 548 2.88E-19 T 23-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG60_15810 3c11fcb6fa122621da321aad34a49b0f 562 Pfam PF00682 HMGL-like 31 311 2.8E-75 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 Pfam PF01743 Poly A polymerase head domain 3 122 8.3E-20 T 23-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 400 40.452 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 Gene3D G3DSA:1.10.3090.10 122 411 3.3E-42 T 23-10-2018 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 2.0E-14 T 23-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.599 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 SUPERFAMILY SSF81301 1 119 2.94E-31 T 23-10-2018 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 SUPERFAMILY SSF81891 120 361 1.7E-53 T 23-10-2018 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 Gene3D G3DSA:3.30.460.10 1 121 2.5E-29 T 23-10-2018 CDG60_06090 121ff10b1013c95b8e071e89c777a66b 413 PIRSF PIRSF000813 1 407 3.2E-190 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDG60_05305 52467a3a39a1540ba5109da6938e9946 159 SUPERFAMILY SSF75217 2 157 1.18E-42 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_05305 52467a3a39a1540ba5109da6938e9946 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 30.725 T 23-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CDG60_05305 52467a3a39a1540ba5109da6938e9946 159 Gene3D G3DSA:3.40.1280.10 1 159 3.2E-58 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_05305 52467a3a39a1540ba5109da6938e9946 159 PIRSF PIRSF029256 1 159 6.1E-59 T 23-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CDG60_05305 52467a3a39a1540ba5109da6938e9946 159 Pfam PF00588 SpoU rRNA Methylase family 2 147 1.5E-34 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG60_04050 f7da896adfa67fcb4cddffde3a3bda49 271 Pfam PF00753 Metallo-beta-lactamase superfamily 32 234 3.5E-17 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_04050 f7da896adfa67fcb4cddffde3a3bda49 271 Gene3D G3DSA:3.60.15.10 2 271 2.7E-52 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_04050 f7da896adfa67fcb4cddffde3a3bda49 271 SUPERFAMILY SSF56281 31 264 2.1E-30 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_04050 f7da896adfa67fcb4cddffde3a3bda49 271 SMART SM00849 31 261 2.0E-15 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_15120 d9fd745248c04fe44b52431efacc726b 255 Gene3D G3DSA:1.10.287.1080 125 252 1.7E-34 T 23-10-2018 CDG60_15120 d9fd745248c04fe44b52431efacc726b 255 Gene3D G3DSA:1.10.287.1080 1 121 1.5E-42 T 23-10-2018 CDG60_15120 d9fd745248c04fe44b52431efacc726b 255 SUPERFAMILY SSF101386 1 96 1.8E-23 T 23-10-2018 CDG60_15120 d9fd745248c04fe44b52431efacc726b 255 TIGRFAM TIGR00444 mazG: MazG family protein 7 249 6.1E-75 T 23-10-2018 IPR011551 NTP pyrophosphohydrolase MazG CDG60_15120 d9fd745248c04fe44b52431efacc726b 255 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 161 218 8.0E-7 T 23-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CDG60_15120 d9fd745248c04fe44b52431efacc726b 255 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 94 1.3E-24 T 23-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CDG60_15120 d9fd745248c04fe44b52431efacc726b 255 SUPERFAMILY SSF101386 140 227 1.61E-18 T 23-10-2018 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Pfam PF06505 Activator of aromatic catabolism 22 120 3.2E-32 T 23-10-2018 IPR010523 Activator of aromatic catabolism CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 SMART SM00382 265 409 2.2E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 SUPERFAMILY SSF111126 50 190 3.45E-13 T 23-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Gene3D G3DSA:3.30.1380.20 17 200 7.3E-10 T 23-10-2018 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 269 282 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 458 467 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Gene3D G3DSA:1.10.8.60 416 482 9.4E-25 T 23-10-2018 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 SMART SM00989 133 195 2.6E-24 T 23-10-2018 IPR004096 4-vinyl reductase, 4VR CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 40 151 2.0E-57 T 23-10-2018 IPR010523 Activator of aromatic catabolism CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 523 540 2.2E-7 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 540 560 2.2E-7 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Gene3D G3DSA:3.40.50.300 231 415 1.2E-62 T 23-10-2018 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Pfam PF02954 Bacterial regulatory protein, Fis family 516 556 6.0E-11 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Pfam PF02830 V4R domain 136 195 1.2E-15 T 23-10-2018 IPR004096 4-vinyl reductase, 4VR CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 SUPERFAMILY SSF52540 246 483 4.06E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Gene3D G3DSA:1.10.10.60 513 558 2.3E-12 T 23-10-2018 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 SUPERFAMILY SSF46689 458 556 1.39E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_14290 bd319f4ed92aa283bb6e344f055e5b28 563 Pfam PF00158 Sigma-54 interaction domain 246 411 1.9E-67 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG60_04310 0974ad9b09a7f9a0602cf92dd23e2614 372 Gene3D G3DSA:3.30.1540.10 226 314 1.2E-105 T 23-10-2018 CDG60_04310 0974ad9b09a7f9a0602cf92dd23e2614 372 Gene3D G3DSA:3.40.50.10540 5 333 1.2E-105 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily CDG60_04310 0974ad9b09a7f9a0602cf92dd23e2614 372 SUPERFAMILY SSF89796 1 369 1.06E-103 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily CDG60_04310 0974ad9b09a7f9a0602cf92dd23e2614 372 Pfam PF02515 CoA-transferase family III 5 357 4.5E-93 T 23-10-2018 IPR003673 CoA-transferase family III GO:0003824 CDG60_07075 53c7ea0cf9d639a8071dc266b80ae8cd 198 Pfam PF01569 PAP2 superfamily 62 164 1.3E-14 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG60_07075 53c7ea0cf9d639a8071dc266b80ae8cd 198 SUPERFAMILY SSF48317 5 172 7.46E-30 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG60_07075 53c7ea0cf9d639a8071dc266b80ae8cd 198 Gene3D G3DSA:1.20.144.10 88 180 7.5E-16 T 23-10-2018 CDG60_07075 53c7ea0cf9d639a8071dc266b80ae8cd 198 SMART SM00014 57 166 2.1E-14 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG60_06785 4d5de188c12024a7d3ac157c3e99efc8 193 SMART SM00867 32 191 5.7E-35 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG60_06785 4d5de188c12024a7d3ac157c3e99efc8 193 Gene3D G3DSA:2.40.128.110 32 191 9.8E-37 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG60_06785 4d5de188c12024a7d3ac157c3e99efc8 193 SUPERFAMILY SSF101874 30 191 6.28E-36 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG60_06785 4d5de188c12024a7d3ac157c3e99efc8 193 Pfam PF04264 YceI-like domain 37 188 8.7E-30 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG60_14615 ace0171d022e798ba5ce2a5ac7fa7826 371 SUPERFAMILY SSF54373 221 306 8.11E-20 T 23-10-2018 CDG60_14615 ace0171d022e798ba5ce2a5ac7fa7826 371 Pfam PF01266 FAD dependent oxidoreductase 2 346 2.0E-57 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG60_14615 ace0171d022e798ba5ce2a5ac7fa7826 371 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 3 351 2.8E-78 T 23-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 CDG60_14615 ace0171d022e798ba5ce2a5ac7fa7826 371 SUPERFAMILY SSF51905 1 365 1.68E-41 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_14615 ace0171d022e798ba5ce2a5ac7fa7826 371 Gene3D G3DSA:3.50.50.60 3 348 5.1E-79 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_14615 ace0171d022e798ba5ce2a5ac7fa7826 371 Gene3D G3DSA:3.30.9.10 88 307 5.1E-79 T 23-10-2018 CDG60_14355 454466e9998ae6c598f457e48d39742a 96 SUPERFAMILY SSF54909 1 95 2.52E-38 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_14355 454466e9998ae6c598f457e48d39742a 96 PIRSF PIRSF001486 1 94 4.9E-49 T 23-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG60_14355 454466e9998ae6c598f457e48d39742a 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 1.4E-48 T 23-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG60_14355 454466e9998ae6c598f457e48d39742a 96 Gene3D G3DSA:3.30.70.1060 1 94 3.7E-36 T 23-10-2018 CDG60_14355 454466e9998ae6c598f457e48d39742a 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 9.0E-41 T 23-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG60_14355 454466e9998ae6c598f457e48d39742a 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 1.0E-25 T 23-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG60_05290 42fc69902efa38ed09376d9ed23ad649 260 Gene3D G3DSA:3.90.640.20 168 254 8.9E-19 T 23-10-2018 IPR037126 PdaC/RsiV-like superfamily CDG60_05290 42fc69902efa38ed09376d9ed23ad649 260 Pfam PF11738 Protein of unknown function (DUF3298) 171 239 1.2E-8 T 23-10-2018 IPR021729 Domain of unknown function DUF3298 CDG60_05290 42fc69902efa38ed09376d9ed23ad649 260 Gene3D G3DSA:3.30.565.40 47 167 3.4E-13 T 23-10-2018 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 SUPERFAMILY SSF50249 132 189 6.85E-17 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 SUPERFAMILY SSF50104 2 63 2.16E-21 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 SMART SM01185 69 125 6.3E-25 T 23-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 SUPERFAMILY SSF50249 69 130 1.03E-14 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 Gene3D G3DSA:2.30.30.30 1 65 3.1E-28 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 Gene3D G3DSA:2.40.50.140 66 131 1.3E-28 T 23-10-2018 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 Pfam PF09285 Elongation factor P, C-terminal 133 188 3.2E-24 T 23-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 Hamap MF_00141 Elongation factor P [efp]. 3 189 49.149 T 23-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 Gene3D G3DSA:2.40.50.140 132 189 9.5E-27 T 23-10-2018 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 SMART SM00841 133 188 1.2E-30 T 23-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.0E-26 T 23-10-2018 IPR013185 Translation elongation factor, KOW-like CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 125 2.7E-21 T 23-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 189 2.2E-76 T 23-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CDG60_07265 a807aa1bb0b72ce9d0faf46c9bc1d351 189 PIRSF PIRSF005901 2 189 3.2E-63 T 23-10-2018 IPR020599 Translation elongation factor P/YeiP CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Gene3D G3DSA:1.20.120.1080 503 576 1.0E-15 T 23-10-2018 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Gene3D G3DSA:1.10.10.2130 425 469 2.3E-9 T 23-10-2018 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 645 720 1.1E-15 T 23-10-2018 IPR011709 Domain of unknown function DUF1605 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 SMART SM00487 58 242 7.8E-29 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 11 1306 0.0 T 23-10-2018 IPR010222 RNA helicase HrpA GO:0004004 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Pfam PF00270 DEAD/DEAH box helicase 65 216 5.7E-7 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Pfam PF11898 Domain of unknown function (DUF3418) 736 1306 4.6E-147 T 23-10-2018 IPR024590 RNA helicase HrpA, C-terminal CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 SUPERFAMILY SSF52540 60 590 2.11E-96 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 SMART SM00382 75 384 5.7E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 SMART SM00847 464 582 5.4E-33 T 23-10-2018 IPR007502 Helicase-associated domain GO:0004386 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Pfam PF00271 Helicase conserved C-terminal domain 288 403 1.9E-11 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 SMART SM00490 303 404 8.9E-14 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Pfam PF04408 Helicase associated domain (HA2) 466 586 1.9E-15 T 23-10-2018 IPR007502 Helicase-associated domain GO:0004386 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Gene3D G3DSA:3.40.50.300 8 235 1.8E-73 T 23-10-2018 CDG60_11540 14df27b090c3f540d602909e8f192bee 1311 Gene3D G3DSA:3.40.50.300 236 421 1.2E-50 T 23-10-2018 CDG60_01535 c9af80aec0ba203a1d4234694a25b774 260 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_01535 c9af80aec0ba203a1d4234694a25b774 260 SUPERFAMILY SSF52540 7 222 3.77E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01535 c9af80aec0ba203a1d4234694a25b774 260 Gene3D G3DSA:3.40.50.300 2 241 1.9E-56 T 23-10-2018 CDG60_01535 c9af80aec0ba203a1d4234694a25b774 260 SMART SM00382 36 203 9.7E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_01535 c9af80aec0ba203a1d4234694a25b774 260 Pfam PF00005 ABC transporter 27 154 2.2E-27 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_08340 fe990d7b068ec182f4a513077b4c4c5f 528 PIRSF PIRSF006446 2 329 3.7E-116 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG60_08340 fe990d7b068ec182f4a513077b4c4c5f 528 PIRSF PIRSF006446 355 527 6.3E-32 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG60_08340 fe990d7b068ec182f4a513077b4c4c5f 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 2.3E-174 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 Pfam PF01926 50S ribosome-binding GTPase 206 323 7.6E-20 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 PIRSF PIRSF006809 9 426 4.0E-136 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 Hamap MF_00900 GTPase HflX [hflX]. 33 394 45.792 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 Gene3D G3DSA:3.40.50.11060 22 144 1.1E-37 T 23-10-2018 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 17 365 5.6E-142 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 Gene3D G3DSA:3.40.50.300 203 370 9.3E-36 T 23-10-2018 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 Pfam PF16360 GTP-binding GTPase Middle Region 120 198 7.6E-24 T 23-10-2018 IPR032305 GTP-binding protein, middle domain CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 273 291 2.7E-7 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.7E-7 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 206 226 2.7E-7 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 SUPERFAMILY SSF52540 204 377 8.93E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04230 e6bd827b8ed7aa7c34f1acc4da189a36 448 Pfam PF13167 GTP-binding GTPase N-terminal 33 118 2.8E-31 T 23-10-2018 IPR025121 GTPase HflX, N-terminal CDG60_14740 39a184b8791d8d2c1a4bfba05eb80216 487 Gene3D G3DSA:1.20.1740.10 8 475 7.4E-62 T 23-10-2018 CDG60_14740 39a184b8791d8d2c1a4bfba05eb80216 487 PIRSF PIRSF006060 1 487 1.5E-81 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_14740 39a184b8791d8d2c1a4bfba05eb80216 487 Pfam PF00324 Amino acid permease 17 470 1.4E-131 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_14740 39a184b8791d8d2c1a4bfba05eb80216 487 ProSitePatterns PS00218 Amino acid permeases signature. 42 73 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG60_02400 7e078104cb9f24964eb8ffb24a8151ab 264 Pfam PF13622 Thioesterase-like superfamily 19 262 8.8E-41 T 23-10-2018 CDG60_02400 7e078104cb9f24964eb8ffb24a8151ab 264 SUPERFAMILY SSF54637 117 262 1.23E-20 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_02400 7e078104cb9f24964eb8ffb24a8151ab 264 SUPERFAMILY SSF54637 13 108 2.65E-17 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_02400 7e078104cb9f24964eb8ffb24a8151ab 264 Gene3D G3DSA:3.10.129.90 6 263 1.1E-60 T 23-10-2018 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 PIRSF PIRSF017184 3 504 6.2E-100 T 23-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 SUPERFAMILY SSF53613 230 498 1.88E-59 T 23-10-2018 IPR029056 Ribokinase-like CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 439 449 - T 23-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 Pfam PF01256 Carbohydrate kinase 249 491 2.2E-48 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 SUPERFAMILY SSF64153 5 248 3.01E-49 T 23-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 21 211 4.9E-29 T 23-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 Gene3D G3DSA:3.40.50.10260 2 221 4.0E-46 T 23-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 Pfam PF03853 YjeF-related protein N-terminus 58 196 5.0E-32 T 23-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 Gene3D G3DSA:3.40.1190.20 227 499 2.4E-69 T 23-10-2018 IPR029056 Ribokinase-like CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 226 502 19.01 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDG60_10660 3c34301bd2e6167a338afae6fba1eaf5 505 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 497 5.9E-59 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDG60_12400 a4cf97fd81a17598a285293a756ca54a 58 Pfam PF12728 Helix-turn-helix domain 2 40 1.8E-9 T 23-10-2018 CDG60_12400 a4cf97fd81a17598a285293a756ca54a 58 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 3 40 6.1E-10 T 23-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CDG60_12035 9eede202fd1f336b335293d074896cda 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_12035 9eede202fd1f336b335293d074896cda 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 4.8E-6 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_12035 9eede202fd1f336b335293d074896cda 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 4.8E-6 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_12035 9eede202fd1f336b335293d074896cda 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 4.8E-6 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_12035 9eede202fd1f336b335293d074896cda 135 SUPERFAMILY SSF46955 4 124 4.03E-31 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG60_12035 9eede202fd1f336b335293d074896cda 135 Gene3D G3DSA:1.10.1660.10 1 129 2.5E-30 T 23-10-2018 CDG60_12035 9eede202fd1f336b335293d074896cda 135 SMART SM00422 4 73 5.2E-21 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_12035 9eede202fd1f336b335293d074896cda 135 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.4E-16 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_16225 f156221592c103dbbb110078057c9071 383 SUPERFAMILY SSF48452 10 113 3.25E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_16225 f156221592c103dbbb110078057c9071 383 Gene3D G3DSA:1.25.40.10 19 132 1.1E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 Pfam PF03466 LysR substrate binding domain 93 293 2.9E-35 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 SUPERFAMILY SSF46785 2 104 4.94E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 SUPERFAMILY SSF53850 94 297 3.67E-31 T 23-10-2018 CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 66 1.2E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 Gene3D G3DSA:1.10.10.10 1 92 2.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_08930 9e8ea4db237a3ebdaaf2e965333bdebb 299 Gene3D G3DSA:3.40.190.290 94 297 3.8E-39 T 23-10-2018 CDG60_02775 b1871f0b6e7dec991358b808365ddfab 203 PIRSF PIRSF029557 7 201 2.0E-44 T 23-10-2018 IPR010707 Protein of unknown function DUF1285 CDG60_02775 b1871f0b6e7dec991358b808365ddfab 203 Pfam PF06938 Protein of unknown function (DUF1285) 56 196 9.1E-47 T 23-10-2018 IPR010707 Protein of unknown function DUF1285 CDG60_02775 b1871f0b6e7dec991358b808365ddfab 203 Gene3D G3DSA:2.30.270.10 107 174 4.1E-12 T 23-10-2018 IPR023361 DUF1285, beta-roll domain superfamily CDG60_02775 b1871f0b6e7dec991358b808365ddfab 203 Gene3D G3DSA:3.10.540.10 15 106 2.4E-32 T 23-10-2018 CDG60_02280 dd927fc895819f023cc8c2873066e02c 290 Gene3D G3DSA:3.40.50.1820 1 289 1.7E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_02280 dd927fc895819f023cc8c2873066e02c 290 PRINTS PR00412 Epoxide hydrolase signature 33 51 2.0E-5 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_02280 dd927fc895819f023cc8c2873066e02c 290 PRINTS PR00412 Epoxide hydrolase signature 99 112 2.0E-5 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_02280 dd927fc895819f023cc8c2873066e02c 290 PRINTS PR00412 Epoxide hydrolase signature 262 284 2.0E-5 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG60_02280 dd927fc895819f023cc8c2873066e02c 290 SUPERFAMILY SSF53474 8 284 8.85E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_02280 dd927fc895819f023cc8c2873066e02c 290 Pfam PF00561 alpha/beta hydrolase fold 27 272 4.9E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.0E-17 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.0E-17 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.0E-17 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.0E-17 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 379 1.4E-19 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 Gene3D G3DSA:3.30.930.10 11 468 2.5E-233 T 23-10-2018 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 SUPERFAMILY SSF55681 10 481 4.79E-104 T 23-10-2018 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 Gene3D G3DSA:3.40.50.800 4 557 2.5E-233 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 SUPERFAMILY SSF55826 218 393 2.75E-22 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 4.3E-47 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 570 1.1E-246 T 23-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 PIRSF PIRSF001535 1 571 1.2E-260 T 23-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 Gene3D G3DSA:3.90.960.10 240 392 2.5E-233 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 40.865 T 23-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 SUPERFAMILY SSF52954 466 570 4.23E-30 T 23-10-2018 CDG60_13660 2d72a0886647ce6dd308ca5e10c0fd4c 571 Pfam PF03129 Anticodon binding domain 478 570 2.6E-19 T 23-10-2018 IPR004154 Anticodon-binding CDG60_10785 a3f788a2222dbbf39449b68581872581 139 Pfam PF01641 SelR domain 10 128 6.9E-56 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG60_10785 a3f788a2222dbbf39449b68581872581 139 Gene3D G3DSA:2.170.150.20 2 139 1.2E-62 T 23-10-2018 CDG60_10785 a3f788a2222dbbf39449b68581872581 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.262 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG60_10785 a3f788a2222dbbf39449b68581872581 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 138 2.2E-58 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG60_10785 a3f788a2222dbbf39449b68581872581 139 SUPERFAMILY SSF51316 5 138 1.73E-59 T 23-10-2018 IPR011057 Mss4-like superfamily CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 Gene3D G3DSA:3.30.2060.10 56 144 6.6E-240 T 23-10-2018 CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 Pfam PF00912 Transglycosylase 153 323 7.1E-58 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 SUPERFAMILY SSF56601 305 745 1.48E-111 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 Pfam PF00905 Penicillin binding protein transpeptidase domain 418 656 2.8E-25 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 Pfam PF14814 Bifunctional transglycosylase second domain 59 141 1.5E-20 T 23-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 PIRSF PIRSF002799 1 775 2.4E-298 T 23-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 11 735 2.3E-236 T 23-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 Gene3D G3DSA:3.40.710.10 48 704 6.6E-240 T 23-10-2018 CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 SUPERFAMILY SSF53955 149 345 1.97E-66 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_11945 3653e41c403702c3ed426261dbe94a7b 799 Gene3D G3DSA:1.10.3810.10 145 347 6.6E-240 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 SUPERFAMILY SSF47384 129 195 1.71E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 362 9.0E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 Gene3D G3DSA:3.30.565.10 200 362 2.6E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 194 1.1E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 SUPERFAMILY SSF55874 203 362 1.02E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 Gene3D G3DSA:1.10.287.130 140 197 2.6E-13 T 23-10-2018 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 SMART SM00091 7 74 2.1E-5 T 23-10-2018 IPR000014 PAS domain CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 SUPERFAMILY SSF55785 9 86 1.33E-7 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 Gene3D G3DSA:3.30.450.20 9 120 1.9E-14 T 23-10-2018 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 3.5E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 3.5E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 3.5E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 Pfam PF00989 PAS fold 8 97 1.5E-10 T 23-10-2018 IPR013767 PAS fold GO:0006355 CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 SMART SM00387 241 364 1.7E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 103 1.4E-5 T 23-10-2018 IPR000014 PAS domain CDG60_10250 a75a54ab584a8f0dbbb7d07bcacd9957 369 SMART SM00388 137 201 9.0E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_05970 d0188369dc69fdda0399d671f8147177 208 Gene3D G3DSA:1.20.120.740 2 176 2.4E-39 T 23-10-2018 CDG60_05970 d0188369dc69fdda0399d671f8147177 208 SUPERFAMILY SSF101327 7 166 1.57E-36 T 23-10-2018 IPR036255 YgfB-like superfamily CDG60_05970 d0188369dc69fdda0399d671f8147177 208 Pfam PF03695 Uncharacterised protein family (UPF0149) 19 164 6.1E-23 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 CDG60_05170 59d2d31281d12b68f92e5420035973b8 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 131 6.6E-15 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDG60_05170 59d2d31281d12b68f92e5420035973b8 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 238 5.1E-24 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_05170 59d2d31281d12b68f92e5420035973b8 247 Gene3D G3DSA:1.10.3720.10 19 239 4.3E-46 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_05170 59d2d31281d12b68f92e5420035973b8 247 SUPERFAMILY SSF161098 24 223 1.83E-38 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 Gene3D G3DSA:1.10.287.130 86 202 1.1E-17 T 23-10-2018 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 Gene3D G3DSA:3.30.565.10 209 366 2.6E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 SUPERFAMILY SSF47384 127 209 4.32E-10 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 SMART SM00304 88 143 1.1E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 SMART SM00387 252 364 1.0E-24 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 SUPERFAMILY SSF55874 197 360 5.24E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 SUPERFAMILY SSF158472 89 139 3.66E-6 T 23-10-2018 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 361 2.1E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 2.0E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 2.0E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 2.0E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 316 2.0E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_00620 81fc12506c54d280e3433e9925cb0267 368 SMART SM00388 144 208 3.4E-4 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_14455 effe612304d9612fc3804f935322c202 222 SMART SM00345 13 71 6.4E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14455 effe612304d9612fc3804f935322c202 222 SMART SM00895 81 205 2.3E-23 T 23-10-2018 IPR011711 GntR, C-terminal CDG60_14455 effe612304d9612fc3804f935322c202 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.5E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14455 effe612304d9612fc3804f935322c202 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.5E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14455 effe612304d9612fc3804f935322c202 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 70 2.9E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14455 effe612304d9612fc3804f935322c202 222 Pfam PF07729 FCD domain 81 203 3.2E-27 T 23-10-2018 IPR011711 GntR, C-terminal CDG60_14455 effe612304d9612fc3804f935322c202 222 Gene3D G3DSA:1.10.10.10 6 72 9.7E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14455 effe612304d9612fc3804f935322c202 222 SUPERFAMILY SSF48008 79 208 1.91E-27 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG60_14455 effe612304d9612fc3804f935322c202 222 Gene3D G3DSA:1.20.120.530 78 207 1.4E-29 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG60_14455 effe612304d9612fc3804f935322c202 222 SUPERFAMILY SSF46785 4 75 6.94E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 6.4E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 6.4E-8 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 Gene3D G3DSA:1.10.10.10 11 80 6.4E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 SUPERFAMILY SSF46785 8 83 1.36E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 SMART SM00866 97 236 1.4E-27 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 Pfam PF07702 UTRA domain 97 233 1.4E-29 T 23-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 SUPERFAMILY SSF64288 64 240 1.08E-37 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 Gene3D G3DSA:3.40.1410.10 81 240 3.4E-31 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 SMART SM00345 17 76 7.4E-14 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_08945 0347fbffc1d771fad6d62e05af9e59a5 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 76 3.5E-14 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_02420 c5900d3a96702bffb6b9eb36a0fbeca4 232 Pfam PF02525 Flavodoxin-like fold 1 208 2.5E-56 T 23-10-2018 IPR003680 Flavodoxin-like fold CDG60_02420 c5900d3a96702bffb6b9eb36a0fbeca4 232 SUPERFAMILY SSF52218 1 229 2.86E-67 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_02420 c5900d3a96702bffb6b9eb36a0fbeca4 232 Gene3D G3DSA:3.40.50.360 1 231 1.6E-80 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_03800 e76925e60d2e073c1651187cf1ef35f4 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 4.8E-156 T 23-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDG60_03800 e76925e60d2e073c1651187cf1ef35f4 352 Gene3D G3DSA:3.90.25.10 201 331 1.7E-135 T 23-10-2018 CDG60_03800 e76925e60d2e073c1651187cf1ef35f4 352 SUPERFAMILY SSF51735 1 334 5.8E-92 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03800 e76925e60d2e073c1651187cf1ef35f4 352 Gene3D G3DSA:3.40.50.720 2 323 1.7E-135 T 23-10-2018 CDG60_03800 e76925e60d2e073c1651187cf1ef35f4 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.2E-100 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG60_06000 b6a402e2a661db62c455eada31549360 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 1.7E-19 T 23-10-2018 CDG60_06000 b6a402e2a661db62c455eada31549360 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 1.7E-19 T 23-10-2018 CDG60_06000 b6a402e2a661db62c455eada31549360 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 1.7E-19 T 23-10-2018 CDG60_06000 b6a402e2a661db62c455eada31549360 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.7E-19 T 23-10-2018 CDG60_06000 b6a402e2a661db62c455eada31549360 402 Gene3D G3DSA:3.30.9.50 84 278 1.1E-97 T 23-10-2018 CDG60_06000 b6a402e2a661db62c455eada31549360 402 SUPERFAMILY SSF51905 4 392 4.75E-56 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06000 b6a402e2a661db62c455eada31549360 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 399 3.3E-109 T 23-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CDG60_06000 b6a402e2a661db62c455eada31549360 402 Pfam PF01494 FAD binding domain 4 357 5.8E-39 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG60_06000 b6a402e2a661db62c455eada31549360 402 Gene3D G3DSA:3.50.50.60 5 347 1.1E-97 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_14440 c45f6162955b6128e974b1e50156d98a 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 10 551 2.5E-292 T 23-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CDG60_14440 c45f6162955b6128e974b1e50156d98a 551 Gene3D G3DSA:3.40.1080.10 36 236 1.3E-13 T 23-10-2018 CDG60_14440 c45f6162955b6128e974b1e50156d98a 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 10 551 0.0 T 23-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CDG60_14440 c45f6162955b6128e974b1e50156d98a 551 SUPERFAMILY SSF100950 226 477 4.67E-19 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_14440 c45f6162955b6128e974b1e50156d98a 551 SUPERFAMILY SSF100950 40 277 3.21E-28 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 SMART SM00065 28 171 1.3E-4 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 Pfam PF00990 Diguanylate cyclase, GGDEF domain 176 331 2.2E-44 T 23-10-2018 IPR000160 GGDEF domain CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 SMART SM00267 165 337 6.9E-48 T 23-10-2018 IPR000160 GGDEF domain CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 SUPERFAMILY SSF55073 181 332 1.02E-43 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 Pfam PF13185 GAF domain 27 160 2.6E-16 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 Gene3D G3DSA:3.30.450.40 10 170 3.3E-23 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 332 7.5E-43 T 23-10-2018 IPR000160 GGDEF domain CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 Gene3D G3DSA:3.30.70.270 171 336 3.7E-50 T 23-10-2018 CDG60_10475 a54af813cced4bb2308e519c0fc0a813 339 SUPERFAMILY SSF55781 18 167 4.58E-21 T 23-10-2018 CDG60_10520 cd354b50956ecd4b80b45a908ad3ddce 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 267 287 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG60_10520 cd354b50956ecd4b80b45a908ad3ddce 390 Gene3D G3DSA:3.40.50.1970 3 191 2.5E-55 T 23-10-2018 CDG60_10520 cd354b50956ecd4b80b45a908ad3ddce 390 Gene3D G3DSA:1.20.1090.10 193 390 7.6E-76 T 23-10-2018 CDG60_10520 cd354b50956ecd4b80b45a908ad3ddce 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 180 208 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG60_10520 cd354b50956ecd4b80b45a908ad3ddce 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 20 382 9.6E-126 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG60_10520 cd354b50956ecd4b80b45a908ad3ddce 390 SUPERFAMILY SSF56796 13 389 7.98E-134 T 23-10-2018 CDG60_06860 f0a250be6ca1ce95770766f152ac238c 336 Pfam PF13531 Bacterial extracellular solute-binding protein 46 282 4.2E-42 T 23-10-2018 CDG60_06860 f0a250be6ca1ce95770766f152ac238c 336 Gene3D G3DSA:3.40.190.10 30 297 1.9E-129 T 23-10-2018 CDG60_06860 f0a250be6ca1ce95770766f152ac238c 336 SUPERFAMILY SSF53850 25 329 1.3E-82 T 23-10-2018 CDG60_06860 f0a250be6ca1ce95770766f152ac238c 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 19 328 4.3E-141 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDG60_06860 f0a250be6ca1ce95770766f152ac238c 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 149 157 - T 23-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CDG60_06860 f0a250be6ca1ce95770766f152ac238c 336 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 51 63 - T 23-10-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CDG60_06860 f0a250be6ca1ce95770766f152ac238c 336 Gene3D G3DSA:3.40.190.10 118 327 1.9E-129 T 23-10-2018 CDG60_02455 6c5bd19e7d1f4457dc4c8273d026d03f 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 184 33.223 T 23-10-2018 IPR003774 Protein of unknown function UPF0301 CDG60_02455 6c5bd19e7d1f4457dc4c8273d026d03f 184 SUPERFAMILY SSF143456 5 184 1.31E-59 T 23-10-2018 CDG60_02455 6c5bd19e7d1f4457dc4c8273d026d03f 184 Pfam PF02622 Uncharacterized ACR, COG1678 15 171 9.3E-44 T 23-10-2018 IPR003774 Protein of unknown function UPF0301 CDG60_02455 6c5bd19e7d1f4457dc4c8273d026d03f 184 Gene3D G3DSA:3.40.1740.10 1 184 1.4E-72 T 23-10-2018 CDG60_00485 22951f27ee1c8f1886492e684a949de4 64 Pfam PF02609 Exonuclease VII small subunit 8 59 8.2E-7 T 23-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CDG60_00485 22951f27ee1c8f1886492e684a949de4 64 SUPERFAMILY SSF116842 2 59 3.53E-5 T 23-10-2018 CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 Gene3D G3DSA:1.10.150.170 110 209 1.6E-102 T 23-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 301 3.9E-107 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 SUPERFAMILY SSF81799 111 207 3.4E-34 T 23-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 SUPERFAMILY SSF53335 3 302 4.78E-43 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 Pfam PF01795 MraW methylase family 2 301 5.0E-106 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 Gene3D G3DSA:3.40.50.150 6 301 1.6E-102 T 23-10-2018 CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 302 37.228 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG60_16805 8280aa14b9c644307795f3de138b6bce 307 PIRSF PIRSF004486 1 303 1.3E-103 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 PIRSF PIRSF001399 1 148 9.2E-63 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 2.0E-66 T 23-10-2018 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 Pfam PF01220 Dehydroquinase class II 5 141 6.2E-62 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 23-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 SUPERFAMILY SSF52304 4 147 1.96E-61 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 71.072 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 144 7.0E-62 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG60_08890 d86938ed97f5cbe46c6ed02b401c0953 151 Gene3D G3DSA:3.40.50.9100 1 151 1.3E-66 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Gene3D G3DSA:2.30.30.140 5 57 1.9E-24 T 23-10-2018 CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Gene3D G3DSA:3.40.50.300 437 612 5.1E-38 T 23-10-2018 CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 SMART SM00490 496 580 6.6E-15 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 943 26.378 T 23-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Pfam PF12137 RNA polymerase recycling family C-terminal 585 942 8.1E-119 T 23-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 SMART SM00487 156 355 6.7E-19 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 SUPERFAMILY SSF52540 281 620 1.97E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Pfam PF00271 Helicase conserved C-terminal domain 476 580 4.9E-11 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Pfam PF00176 SNF2 family N-terminal domain 180 352 1.3E-11 T 23-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Gene3D G3DSA:3.40.50.10810 156 425 2.2E-85 T 23-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 SUPERFAMILY SSF52540 136 386 4.54E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11650 decd05b4c2f125e45e050d7362e9b84a 945 Gene3D G3DSA:3.30.360.80 691 762 1.1E-21 T 23-10-2018 CDG60_17020 6b32327c9578b9beda67cccbabb55420 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 201 1.4E-28 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_17020 6b32327c9578b9beda67cccbabb55420 333 Gene3D G3DSA:1.10.10.60 223 332 5.6E-24 T 23-10-2018 CDG60_17020 6b32327c9578b9beda67cccbabb55420 333 SMART SM00342 246 328 1.6E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_17020 6b32327c9578b9beda67cccbabb55420 333 Pfam PF12833 Helix-turn-helix domain 252 328 1.0E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_17020 6b32327c9578b9beda67cccbabb55420 333 SUPERFAMILY SSF46689 281 328 1.61E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_01100 109be734e392318b8bd4b73683ee5f52 388 Gene3D G3DSA:3.40.50.2000 15 195 5.6E-9 T 23-10-2018 CDG60_01100 109be734e392318b8bd4b73683ee5f52 388 Pfam PF00534 Glycosyl transferases group 1 191 354 5.4E-15 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG60_01100 109be734e392318b8bd4b73683ee5f52 388 Gene3D G3DSA:3.40.50.2000 196 366 2.1E-19 T 23-10-2018 CDG60_01100 109be734e392318b8bd4b73683ee5f52 388 SUPERFAMILY SSF53756 35 375 1.15E-34 T 23-10-2018 CDG60_05950 6da281178670987d3d30177e5176fab2 257 SUPERFAMILY SSF51294 20 245 9.68E-19 T 23-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_05950 6da281178670987d3d30177e5176fab2 257 Gene3D G3DSA:2.170.16.10 181 245 4.5E-7 T 23-10-2018 CDG60_05950 6da281178670987d3d30177e5176fab2 257 Gene3D G3DSA:2.170.16.10 17 166 2.8E-20 T 23-10-2018 CDG60_05950 6da281178670987d3d30177e5176fab2 257 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 222 246 3.7E-7 T 23-10-2018 IPR030934 Intein C-terminal splicing region CDG60_05950 6da281178670987d3d30177e5176fab2 257 Pfam PF07591 Pretoxin HINT domain 26 155 2.7E-6 T 23-10-2018 CDG60_05950 6da281178670987d3d30177e5176fab2 257 SMART SM00306 18 127 6.8E-4 T 23-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_17735 b8ef6d684b14ed705a001fc841a5dd66 187 Pfam PF03352 Methyladenine glycosylase 8 184 1.2E-68 T 23-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CDG60_17735 b8ef6d684b14ed705a001fc841a5dd66 187 SUPERFAMILY SSF48150 4 185 1.02E-71 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDG60_17735 b8ef6d684b14ed705a001fc841a5dd66 187 Gene3D G3DSA:1.10.340.30 3 187 1.7E-72 T 23-10-2018 CDG60_17735 b8ef6d684b14ed705a001fc841a5dd66 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 182 2.7E-70 T 23-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 Pfam PF01177 Asp/Glu/Hydantoin racemase 23 235 3.0E-27 T 23-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 23-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 TIGRFAM TIGR00067 glut_race: glutamate racemase 23 264 7.4E-67 T 23-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 Hamap MF_00258 Glutamate racemase [murI]. 21 279 34.908 T 23-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 Gene3D G3DSA:3.40.50.1860 22 262 1.2E-77 T 23-10-2018 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 SUPERFAMILY SSF53681 22 125 1.18E-34 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 SUPERFAMILY SSF53681 127 265 8.94E-30 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 Gene3D G3DSA:3.40.50.1860 114 227 1.2E-77 T 23-10-2018 CDG60_02780 dd194a09f0fd46f746698ffb22f01612 290 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 87 95 - T 23-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG60_17865 2d879f6dedb53a82106794533245def2 194 Pfam PF06940 Domain of unknown function (DUF1287) 30 189 3.6E-62 T 23-10-2018 IPR009706 Protein of unknown function DUF1287 CDG60_17865 2d879f6dedb53a82106794533245def2 194 PIRSF PIRSF011444 9 192 3.0E-74 T 23-10-2018 IPR009706 Protein of unknown function DUF1287 CDG60_17865 2d879f6dedb53a82106794533245def2 194 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 23 189 9.0E-52 T 23-10-2018 IPR009706 Protein of unknown function DUF1287 CDG60_17700 29c9eeab4d2642d47c6d12bfc44a0632 150 PIRSF PIRSF006173 1 150 2.8E-65 T 23-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 CDG60_17700 29c9eeab4d2642d47c6d12bfc44a0632 150 Pfam PF03692 Putative zinc- or iron-chelating domain 27 95 6.1E-9 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CDG60_17700 29c9eeab4d2642d47c6d12bfc44a0632 150 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 5 150 37.066 T 23-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 Pfam PF00581 Rhodanese-like domain 157 267 8.7E-17 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 Pfam PF00581 Rhodanese-like domain 14 123 1.2E-14 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 SUPERFAMILY SSF52821 149 278 4.19E-29 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 Gene3D G3DSA:3.40.250.10 7 142 3.9E-31 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 SMART SM00450 153 272 1.3E-17 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 SMART SM00450 12 127 3.9E-14 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 SUPERFAMILY SSF52821 10 181 2.23E-29 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_17600 1f125572a0463af795d36d8ba339b1f8 281 Gene3D G3DSA:3.40.250.10 150 274 4.0E-29 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_01450 4ab35c824f4a81f9f377befaeadf541c 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 5.3E-18 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_01450 4ab35c824f4a81f9f377befaeadf541c 219 Gene3D G3DSA:1.20.1050.10 84 209 1.5E-22 T 23-10-2018 CDG60_01450 4ab35c824f4a81f9f377befaeadf541c 219 SUPERFAMILY SSF52833 1 82 2.84E-20 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_01450 4ab35c824f4a81f9f377befaeadf541c 219 Gene3D G3DSA:3.40.30.10 1 83 3.4E-34 T 23-10-2018 CDG60_01450 4ab35c824f4a81f9f377befaeadf541c 219 SUPERFAMILY SSF47616 83 209 9.61E-19 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG60_01450 4ab35c824f4a81f9f377befaeadf541c 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 201 1.4E-6 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG60_01905 99ec8f8b01848f6ecefb4661e7ae9d29 441 Pfam PF03573 outer membrane porin, OprD family 30 440 8.6E-106 T 23-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 CDG60_01905 99ec8f8b01848f6ecefb4661e7ae9d29 441 Gene3D G3DSA:2.40.160.10 12 441 1.7E-140 T 23-10-2018 IPR023614 Porin domain superfamily CDG60_08220 58f28a9d477de226c618f077bd08310d 431 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 80 190 3.4E-17 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 Gene3D G3DSA:2.40.110.10 197 290 2.4E-11 T 23-10-2018 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 199 285 6.7E-10 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 399 418 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 Gene3D G3DSA:1.20.140.10 298 428 3.5E-34 T 23-10-2018 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 SUPERFAMILY SSF56645 75 290 9.03E-35 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 SUPERFAMILY SSF47203 301 424 4.19E-35 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 302 424 2.8E-27 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_08220 58f28a9d477de226c618f077bd08310d 431 Gene3D G3DSA:1.10.540.10 69 193 2.8E-20 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_17975 151b695541211c85994cdcef36056bd3 303 PRINTS PR00138 Matrixin signature 257 282 6.5E-8 T 23-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 CDG60_17975 151b695541211c85994cdcef36056bd3 303 PRINTS PR00138 Matrixin signature 65 80 6.5E-8 T 23-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 CDG60_17975 151b695541211c85994cdcef36056bd3 303 Gene3D G3DSA:3.40.390.10 139 302 8.8E-15 T 23-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CDG60_17975 151b695541211c85994cdcef36056bd3 303 SUPERFAMILY SSF55486 235 302 1.66E-14 T 23-10-2018 CDG60_17975 151b695541211c85994cdcef36056bd3 303 Pfam PF00413 Matrixin 141 298 6.7E-12 T 23-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 CDG60_17975 151b695541211c85994cdcef36056bd3 303 SUPERFAMILY SSF55486 102 292 4.81E-12 T 23-10-2018 CDG60_18110 7d65c1a20020e525331b75ca22e41542 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.1E-26 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_18110 7d65c1a20020e525331b75ca22e41542 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_18110 7d65c1a20020e525331b75ca22e41542 44 Pfam PF00468 Ribosomal protein L34 1 44 1.8E-25 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_18110 7d65c1a20020e525331b75ca22e41542 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_18110 7d65c1a20020e525331b75ca22e41542 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_12345 20be0d72c3f9a079e32beb0215ffe1f7 300 Pfam PF08273 Zinc-binding domain of primase-helicase 34 69 1.9E-16 T 23-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CDG60_12345 20be0d72c3f9a079e32beb0215ffe1f7 300 Pfam PF13662 Toprim domain 214 283 1.4E-7 T 23-10-2018 IPR006171 TOPRIM domain CDG60_12345 20be0d72c3f9a079e32beb0215ffe1f7 300 SUPERFAMILY SSF57783 22 95 5.53E-11 T 23-10-2018 CDG60_12345 20be0d72c3f9a079e32beb0215ffe1f7 300 SMART SM00778 33 69 8.6E-18 T 23-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 Gene3D G3DSA:2.40.30.170 49 314 3.4E-80 T 23-10-2018 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 SUPERFAMILY SSF111369 52 248 1.31E-24 T 23-10-2018 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 329 9.2E-40 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 Gene3D G3DSA:2.40.50.100 60 222 3.4E-80 T 23-10-2018 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 Gene3D G3DSA:1.10.287.470 94 185 3.4E-80 T 23-10-2018 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 Gene3D G3DSA:2.40.420.20 371 444 1.6E-7 T 23-10-2018 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 Gene3D G3DSA:2.40.420.20 44 331 3.4E-80 T 23-10-2018 CDG60_15245 6c33e5744d3a6a503a458eb013a4eaa4 447 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 265 2.7E-13 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG60_10025 bb093bfffeeb652744048957bfe5751d 350 Pfam PF13609 Gram-negative porin 8 328 4.7E-27 T 23-10-2018 CDG60_10025 bb093bfffeeb652744048957bfe5751d 350 SUPERFAMILY SSF56935 19 350 8.85E-48 T 23-10-2018 CDG60_10025 bb093bfffeeb652744048957bfe5751d 350 Gene3D G3DSA:2.40.160.10 8 350 1.5E-55 T 23-10-2018 IPR023614 Porin domain superfamily CDG60_09980 ffa83ad23ecdd058f2b38403da4821ac 97 SUPERFAMILY SSF160191 1 81 1.31E-27 T 23-10-2018 IPR038068 YcgL-like superfamily CDG60_09980 ffa83ad23ecdd058f2b38403da4821ac 97 Pfam PF05166 YcgL domain 3 80 1.5E-28 T 23-10-2018 IPR027354 YcgL domain CDG60_09980 ffa83ad23ecdd058f2b38403da4821ac 97 Hamap MF_01866 Protein YcgL [ycgL]. 1 93 23.346 T 23-10-2018 IPR027354 YcgL domain CDG60_09980 ffa83ad23ecdd058f2b38403da4821ac 97 Gene3D G3DSA:3.10.510.20 1 79 2.5E-29 T 23-10-2018 IPR038068 YcgL-like superfamily CDG60_09980 ffa83ad23ecdd058f2b38403da4821ac 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 81 2.0E-29 T 23-10-2018 IPR027354 YcgL domain CDG60_11155 a96e68ac22b11c209c241169c75efc71 517 PIRSF PIRSF005522 35 517 4.2E-213 T 23-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 CDG60_11155 a96e68ac22b11c209c241169c75efc71 517 Pfam PF14403 Circularly permuted ATP-grasp type 2 116 490 6.7E-152 T 23-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 CDG60_11155 a96e68ac22b11c209c241169c75efc71 517 Gene3D G3DSA:3.30.1490.270 386 446 1.7E-24 T 23-10-2018 CDG60_11155 a96e68ac22b11c209c241169c75efc71 517 Gene3D G3DSA:3.40.50.11290 251 349 1.2E-38 T 23-10-2018 CDG60_11155 a96e68ac22b11c209c241169c75efc71 517 SUPERFAMILY SSF56059 92 505 8.22E-54 T 23-10-2018 CDG60_15675 65d38f4719b0e601c7974118d0c6d7f6 260 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 15 254 15.759 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG60_15675 65d38f4719b0e601c7974118d0c6d7f6 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 119 145 4.7E-39 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG60_15675 65d38f4719b0e601c7974118d0c6d7f6 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 170 198 4.7E-39 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG60_15675 65d38f4719b0e601c7974118d0c6d7f6 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 101 119 4.7E-39 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG60_15675 65d38f4719b0e601c7974118d0c6d7f6 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 24 51 4.7E-39 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG60_15675 65d38f4719b0e601c7974118d0c6d7f6 260 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 25 242 1.4E-63 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG60_15675 65d38f4719b0e601c7974118d0c6d7f6 260 Pfam PF00902 Sec-independent protein translocase protein (TatC) 27 237 3.1E-59 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 SMART SM00387 332 440 2.8E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 434 1.5E-12 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 SUPERFAMILY SSF55874 296 436 7.33E-25 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 286 8.0E-14 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 SMART SM00388 224 287 6.3E-14 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 Gene3D G3DSA:3.30.565.10 288 437 1.8E-26 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 SUPERFAMILY SSF47384 207 285 1.41E-14 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_11965 ceb5ff2498d05b4330d44b31a8d29be0 440 Gene3D G3DSA:1.10.287.130 209 287 4.4E-16 T 23-10-2018 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 Gene3D G3DSA:3.40.50.1980 31 232 2.1E-123 T 23-10-2018 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 428 40.436 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 Gene3D G3DSA:3.40.50.1980 234 350 2.1E-123 T 23-10-2018 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 Pfam PF00815 Histidinol dehydrogenase 25 427 1.4E-167 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 SUPERFAMILY SSF53720 27 428 2.16E-85 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 6.6E-79 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 PIRSF PIRSF000099 1 429 1.7E-156 T 23-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 5.5E-159 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_14795 a5b1eef9be3dc1f548596f142f8a172d 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 23-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CDG60_15635 034f7272e3b53c6637448765f08d02d5 195 SMART SM00671 53 88 3.2E-9 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15635 034f7272e3b53c6637448765f08d02d5 195 SMART SM00671 89 124 4.6E-8 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15635 034f7272e3b53c6637448765f08d02d5 195 SUPERFAMILY SSF81901 42 152 7.46E-26 T 23-10-2018 CDG60_15635 034f7272e3b53c6637448765f08d02d5 195 Gene3D G3DSA:1.25.40.10 24 195 2.4E-36 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15635 034f7272e3b53c6637448765f08d02d5 195 Pfam PF08238 Sel1 repeat 138 152 87.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15635 034f7272e3b53c6637448765f08d02d5 195 Pfam PF08238 Sel1 repeat 89 124 8.6E-8 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15635 034f7272e3b53c6637448765f08d02d5 195 Pfam PF08238 Sel1 repeat 54 87 7.4E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_08465 848d30e9267ef705076020a8b621d933 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.1E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 1.1E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 1.1E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 1.1E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 Gene3D G3DSA:3.40.50.1370 134 294 4.0E-111 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 SUPERFAMILY SSF53671 2 300 1.96E-102 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 296 1.5E-49 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 299 1.6E-114 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG60_08465 848d30e9267ef705076020a8b621d933 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 1.2E-50 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 Gene3D G3DSA:3.40.50.1370 4 133 4.0E-111 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG60_08465 848d30e9267ef705076020a8b621d933 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 78.559 T 23-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CDG60_11675 d235f9e9fbc2ce9c73372813a56c978c 207 Gene3D G3DSA:3.20.20.70 3 200 3.3E-49 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_11675 d235f9e9fbc2ce9c73372813a56c978c 207 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 203 21.052 T 23-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_11675 d235f9e9fbc2ce9c73372813a56c978c 207 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 4 185 1.5E-46 T 23-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_11675 d235f9e9fbc2ce9c73372813a56c978c 207 SUPERFAMILY SSF51391 3 185 4.19E-50 T 23-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_11675 d235f9e9fbc2ce9c73372813a56c978c 207 Pfam PF02581 Thiamine monophosphate synthase 4 183 1.0E-51 T 23-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_11070 96b1ac24034f98ff6a24f8262f4fd6b0 184 Pfam PF01292 Prokaryotic cytochrome b561 8 181 1.3E-27 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDG60_11070 96b1ac24034f98ff6a24f8262f4fd6b0 184 SUPERFAMILY SSF81342 3 180 7.77E-35 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDG60_11070 96b1ac24034f98ff6a24f8262f4fd6b0 184 Gene3D G3DSA:1.20.950.20 2 89 8.6E-7 T 23-10-2018 CDG60_06275 ecd05ff8091bb479aee9710efa7829c9 554 Pfam PF02652 L-lactate permease 18 545 1.3E-214 T 23-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CDG60_06275 ecd05ff8091bb479aee9710efa7829c9 554 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 547 3.7E-224 T 23-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CDG60_07230 4a694e921e78472f6924609341c0fad3 721 Gene3D G3DSA:1.20.1250.20 21 408 2.6E-9 T 23-10-2018 CDG60_07230 4a694e921e78472f6924609341c0fad3 721 SUPERFAMILY SSF103473 289 417 1.96E-6 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_07230 4a694e921e78472f6924609341c0fad3 721 Gene3D G3DSA:2.60.40.10 487 585 5.1E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_07230 4a694e921e78472f6924609341c0fad3 721 Pfam PF07690 Major Facilitator Superfamily 28 348 1.7E-9 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_07230 4a694e921e78472f6924609341c0fad3 721 SUPERFAMILY SSF103473 22 297 5.23E-14 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_05230 410b7399a45cd55df73838f4decdf04a 147 Pfam PF01906 Putative heavy-metal-binding 60 142 1.2E-21 T 23-10-2018 IPR002765 Uncharacterised protein family UPF0145 CDG60_05230 410b7399a45cd55df73838f4decdf04a 147 Gene3D G3DSA:3.30.110.70 45 145 1.2E-22 T 23-10-2018 CDG60_05230 410b7399a45cd55df73838f4decdf04a 147 SUPERFAMILY SSF117782 60 143 2.09E-22 T 23-10-2018 IPR035439 UPF0145 domain superfamily CDG60_13705 2b0323dca6fd7ffe1abfa109eb23fb09 417 ProSitePatterns PS01215 Mrp family signature. 268 284 - T 23-10-2018 IPR000808 Mrp, conserved site GO:0005524 CDG60_13705 2b0323dca6fd7ffe1abfa109eb23fb09 417 SUPERFAMILY SSF52540 156 386 3.23E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_13705 2b0323dca6fd7ffe1abfa109eb23fb09 417 Gene3D G3DSA:3.40.50.300 154 402 4.2E-81 T 23-10-2018 CDG60_13705 2b0323dca6fd7ffe1abfa109eb23fb09 417 Hamap MF_02040 Iron-sulfur cluster carrier protein. 153 403 35.987 T 23-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein CDG60_13705 2b0323dca6fd7ffe1abfa109eb23fb09 417 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 161 402 9.9E-98 T 23-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 Gene3D G3DSA:3.40.50.720 1 238 6.1E-68 T 23-10-2018 CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 238 6.3E-59 T 23-10-2018 CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 SUPERFAMILY SSF51735 6 239 5.2E-68 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 9.7E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 9.7E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 9.7E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 9.7E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 9.7E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.7E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.9E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.9E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_14220 4ff734f2d3b6b6e1bd8685fe04b9bb41 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.9E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03575 aad53467f0ea7beb85215999416958d9 996 Gene3D G3DSA:3.40.50.300 48 239 1.1E-24 T 23-10-2018 CDG60_03575 aad53467f0ea7beb85215999416958d9 996 SUPERFAMILY SSF52540 99 384 3.78E-27 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_03575 aad53467f0ea7beb85215999416958d9 996 Pfam PF00271 Helicase conserved C-terminal domain 294 375 1.6E-6 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_03575 aad53467f0ea7beb85215999416958d9 996 Gene3D G3DSA:3.40.50.300 253 434 2.1E-15 T 23-10-2018 CDG60_03575 aad53467f0ea7beb85215999416958d9 996 SMART SM00490 297 376 0.0015 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_03575 aad53467f0ea7beb85215999416958d9 996 SMART SM00487 48 251 6.4E-15 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_03575 aad53467f0ea7beb85215999416958d9 996 Pfam PF04851 Type III restriction enzyme, res subunit 70 219 8.2E-22 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 SUPERFAMILY SSF56601 252 609 8.72E-97 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 SUPERFAMILY SSF56519 58 251 4.19E-52 T 23-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 604 3.6E-73 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 612 48.881 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 Gene3D G3DSA:3.90.1310.10 66 247 1.9E-47 T 23-10-2018 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 Gene3D G3DSA:3.30.1390.30 87 162 1.9E-47 T 23-10-2018 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 609 1.5E-218 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 Gene3D G3DSA:3.40.710.10 251 612 9.6E-100 T 23-10-2018 CDG60_01200 e5711df5d945b7fcf3f360a83fe107ca 613 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 237 3.3E-46 T 23-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CDG60_04375 0e743523a947771ac8945e40916dd738 202 Pfam PF00293 NUDIX domain 24 130 2.5E-11 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_04375 0e743523a947771ac8945e40916dd738 202 SUPERFAMILY SSF55811 24 173 1.29E-27 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_04375 0e743523a947771ac8945e40916dd738 202 Gene3D G3DSA:3.90.79.10 3 180 3.5E-44 T 23-10-2018 CDG60_16875 c89fa6b6832279c7da2fdfc46eaed125 465 Gene3D G3DSA:1.20.1600.10 38 426 2.2E-35 T 23-10-2018 CDG60_16875 c89fa6b6832279c7da2fdfc46eaed125 465 Pfam PF02321 Outer membrane efflux protein 258 414 3.1E-11 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_16875 c89fa6b6832279c7da2fdfc46eaed125 465 Pfam PF02321 Outer membrane efflux protein 53 225 3.2E-12 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_16875 c89fa6b6832279c7da2fdfc46eaed125 465 SUPERFAMILY SSF56954 23 425 3.01E-47 T 23-10-2018 CDG60_11485 f87ba8382f14e5d1bc09b2f172c01aa0 517 Pfam PF10029 Predicted periplasmic protein (DUF2271) 378 507 2.1E-38 T 23-10-2018 IPR014469 Protein of unknown function DUF2271 CDG60_11485 f87ba8382f14e5d1bc09b2f172c01aa0 517 SUPERFAMILY SSF143631 52 351 4.18E-60 T 23-10-2018 IPR003374 ApbE-like superfamily CDG60_11485 f87ba8382f14e5d1bc09b2f172c01aa0 517 Pfam PF02424 ApbE family 60 327 1.7E-55 T 23-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 CDG60_11485 f87ba8382f14e5d1bc09b2f172c01aa0 517 Gene3D G3DSA:3.10.520.20 45 361 1.3E-66 T 23-10-2018 CDG60_10195 6a96ad27363dfc71a1d34af1c347c7e4 162 SUPERFAMILY SSF54637 19 154 1.32E-44 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_10195 6a96ad27363dfc71a1d34af1c347c7e4 162 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 17 158 30.926 T 23-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG60_10195 6a96ad27363dfc71a1d34af1c347c7e4 162 Gene3D G3DSA:3.10.129.10 11 159 3.0E-54 T 23-10-2018 CDG60_10195 6a96ad27363dfc71a1d34af1c347c7e4 162 Pfam PF07977 FabA-like domain 26 150 6.8E-31 T 23-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG60_10195 6a96ad27363dfc71a1d34af1c347c7e4 162 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 17 154 1.8E-55 T 23-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG60_03730 e0f6ad90bad514fbc1784e4e412cdb90 188 SUPERFAMILY SSF140478 24 164 1.16E-32 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG60_03730 e0f6ad90bad514fbc1784e4e412cdb90 188 Gene3D G3DSA:1.20.1440.20 16 180 7.3E-30 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG60_03730 e0f6ad90bad514fbc1784e4e412cdb90 188 Pfam PF04011 LemA family 5 164 2.6E-34 T 23-10-2018 IPR007156 LemA CDG60_11625 ffb9cf5f824f9e823a37cbb97c77a66f 223 Gene3D G3DSA:3.40.50.1000 11 207 1.0E-33 T 23-10-2018 IPR023214 HAD superfamily CDG60_11625 ffb9cf5f824f9e823a37cbb97c77a66f 223 SUPERFAMILY SSF56784 7 202 4.61E-21 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_11625 ffb9cf5f824f9e823a37cbb97c77a66f 223 Gene3D G3DSA:1.20.1440.100 23 94 1.0E-33 T 23-10-2018 CDG60_11625 ffb9cf5f824f9e823a37cbb97c77a66f 223 ProSitePatterns PS01228 Hypothetical cof family signature 1. 11 22 - T 23-10-2018 CDG60_11625 ffb9cf5f824f9e823a37cbb97c77a66f 223 Pfam PF12710 haloacid dehalogenase-like hydrolase 12 191 7.2E-26 T 23-10-2018 CDG60_11625 ffb9cf5f824f9e823a37cbb97c77a66f 223 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 11 193 1.1E-24 T 23-10-2018 CDG60_11625 ffb9cf5f824f9e823a37cbb97c77a66f 223 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 11 201 4.5E-30 T 23-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDG60_05315 5f9d9b935560b05f40247a310dbcb6df 464 PIRSF PIRSF006060 2 463 1.5E-64 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_05315 5f9d9b935560b05f40247a310dbcb6df 464 Gene3D G3DSA:1.20.1740.10 12 459 3.7E-72 T 23-10-2018 CDG60_05315 5f9d9b935560b05f40247a310dbcb6df 464 Pfam PF00324 Amino acid permease 21 383 1.6E-37 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 SMART SM00448 4 118 8.1E-42 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 Gene3D G3DSA:1.10.10.10 132 231 1.4E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 Pfam PF00072 Response regulator receiver domain 6 119 1.3E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 228 8.1E-102 T 23-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 SUPERFAMILY SSF46894 130 228 2.1E-29 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 Gene3D G3DSA:3.40.50.2300 2 131 1.1E-36 T 23-10-2018 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 SMART SM00862 152 227 9.8E-26 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 4.4E-25 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_17585 a0eaef64ccacc12a6bf57e6dfad48bdf 236 SUPERFAMILY SSF52172 5 130 2.99E-40 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_13120 319fdbe2f9675921ef3679240ccbf0a0 342 SUPERFAMILY SSF81345 10 330 2.48E-61 T 23-10-2018 IPR037294 ABC transporter, BtuC-like CDG60_13120 319fdbe2f9675921ef3679240ccbf0a0 342 Pfam PF01032 FecCD transport family 20 330 1.2E-72 T 23-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CDG60_13120 319fdbe2f9675921ef3679240ccbf0a0 342 Gene3D G3DSA:1.10.3470.10 7 336 1.6E-73 T 23-10-2018 IPR037294 ABC transporter, BtuC-like CDG60_11770 ade9cfe6cd2e994fb3d75d65469c9fc7 392 SUPERFAMILY SSF103473 5 389 7.46E-27 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_11770 ade9cfe6cd2e994fb3d75d65469c9fc7 392 Gene3D G3DSA:1.20.1250.20 205 389 7.6E-6 T 23-10-2018 CDG60_11770 ade9cfe6cd2e994fb3d75d65469c9fc7 392 Gene3D G3DSA:1.20.1250.20 4 195 6.4E-12 T 23-10-2018 CDG60_11770 ade9cfe6cd2e994fb3d75d65469c9fc7 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 16 376 2.0E-44 T 23-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 SUPERFAMILY SSF46548 10 160 4.6E-38 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 3.8E-25 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 1.9E-34 T 23-10-2018 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 1.9E-34 T 23-10-2018 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 1.9E-34 T 23-10-2018 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 1.9E-34 T 23-10-2018 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 1.9E-34 T 23-10-2018 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 Gene3D G3DSA:1.10.1060.10 13 148 6.4E-32 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 Gene3D G3DSA:3.50.50.60 255 401 9.6E-47 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 473 7.0E-237 T 23-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 135 4.8E-36 T 23-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 SUPERFAMILY SSF51971 148 402 1.59E-69 T 23-10-2018 CDG60_16720 074e1674fcc89d84af5b88d1c34bbbba 473 Gene3D G3DSA:3.40.50.720 149 254 1.5E-13 T 23-10-2018 CDG60_04235 96f6c1616defbe2fe9c67195cf74672a 275 SMART SM00563 83 194 1.4E-13 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_04235 96f6c1616defbe2fe9c67195cf74672a 275 SUPERFAMILY SSF69593 40 260 3.79E-21 T 23-10-2018 CDG60_04235 96f6c1616defbe2fe9c67195cf74672a 275 Pfam PF01553 Acyltransferase 72 187 7.1E-16 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_17740 d398301ee07849068854450f48635094 340 SMART SM00829 16 336 7.9E-7 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG60_17740 d398301ee07849068854450f48635094 340 Gene3D G3DSA:3.40.50.720 154 308 1.5E-113 T 23-10-2018 CDG60_17740 d398301ee07849068854450f48635094 340 Pfam PF00107 Zinc-binding dehydrogenase 180 302 6.4E-21 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG60_17740 d398301ee07849068854450f48635094 340 Gene3D G3DSA:3.90.180.10 20 336 1.5E-113 T 23-10-2018 CDG60_17740 d398301ee07849068854450f48635094 340 SUPERFAMILY SSF50129 8 163 1.07E-42 T 23-10-2018 IPR011032 GroES-like superfamily CDG60_17740 d398301ee07849068854450f48635094 340 SUPERFAMILY SSF51735 143 306 3.95E-35 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_17740 d398301ee07849068854450f48635094 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CDG60_17740 d398301ee07849068854450f48635094 340 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 173 200 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG60_17740 d398301ee07849068854450f48635094 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 138 5.6E-25 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG60_10555 7cd10be5e289d1ed971e11dd9b8d03d7 305 Gene3D G3DSA:1.20.1530.20 157 305 6.7E-8 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_10555 7cd10be5e289d1ed971e11dd9b8d03d7 305 Pfam PF01758 Sodium Bile acid symporter family 198 302 3.8E-7 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG60_12530 140c37a712bc3453c5da1f32288d0fde 365 PIRSF PIRSF029347 1 365 2.5E-137 T 23-10-2018 IPR014555 RecF-like CDG60_12530 140c37a712bc3453c5da1f32288d0fde 365 SUPERFAMILY SSF52540 1 347 5.82E-27 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12530 140c37a712bc3453c5da1f32288d0fde 365 Gene3D G3DSA:3.40.50.300 1 153 1.2E-10 T 23-10-2018 CDG60_12530 140c37a712bc3453c5da1f32288d0fde 365 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 337 2.7E-27 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_12530 140c37a712bc3453c5da1f32288d0fde 365 Gene3D G3DSA:3.40.50.300 173 365 2.3E-10 T 23-10-2018 CDG60_01120 51d841cf8d282cdc1e6594b3da2dffc2 217 SUPERFAMILY SSF51161 9 213 1.3E-35 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_01120 51d841cf8d282cdc1e6594b3da2dffc2 217 Gene3D G3DSA:3.40.50.20 3 92 5.2E-21 T 23-10-2018 CDG60_01120 51d841cf8d282cdc1e6594b3da2dffc2 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 8 212 1.7E-52 T 23-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like CDG60_01120 51d841cf8d282cdc1e6594b3da2dffc2 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 155 5.1E-4 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_01120 51d841cf8d282cdc1e6594b3da2dffc2 217 Gene3D G3DSA:2.160.10.10 93 207 1.4E-34 T 23-10-2018 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Pfam PF02151 UvrB/uvrC motif 638 670 3.2E-8 T 23-10-2018 IPR001943 UVR domain GO:0005515 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 7 668 0.0 T 23-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 SMART SM00490 461 547 7.3E-21 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_07020 868bafa7c711aa3014c10693acf78378 673 SUPERFAMILY SSF52540 36 587 3.17E-37 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 670 42.802 T 23-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 SUPERFAMILY SSF46600 634 672 4.32E-10 T 23-10-2018 IPR036876 UVR domain superfamily CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Pfam PF12344 Ultra-violet resistance protein B 553 593 7.0E-21 T 23-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Gene3D G3DSA:4.10.860.10 615 673 8.3E-10 T 23-10-2018 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Gene3D G3DSA:3.40.50.300 416 590 2.0E-48 T 23-10-2018 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 SMART SM00487 11 427 3.1E-27 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Gene3D G3DSA:3.40.50.300 1 236 4.6E-75 T 23-10-2018 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 SUPERFAMILY SSF52540 5 416 5.26E-142 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Pfam PF00271 Helicase conserved C-terminal domain 442 546 1.1E-17 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Gene3D G3DSA:3.40.50.300 266 415 7.4E-52 T 23-10-2018 CDG60_07020 868bafa7c711aa3014c10693acf78378 673 Pfam PF04851 Type III restriction enzyme, res subunit 17 99 2.2E-9 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG60_10450 05dff45c6484d0c8e282d65b3de374f8 110 Gene3D G3DSA:1.10.1220.10 2 51 2.3E-14 T 23-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDG60_10450 05dff45c6484d0c8e282d65b3de374f8 110 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 81 3.4E-18 T 23-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CDG60_10450 05dff45c6484d0c8e282d65b3de374f8 110 Pfam PF04221 RelB antitoxin 6 70 1.2E-12 T 23-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CDG60_13025 7e1894f5639aee289e6061f9e0a4bf91 53 Pfam PF07235 Protein of unknown function (DUF1427) 2 53 1.5E-24 T 23-10-2018 IPR009872 Protein of unknown function DUF1427 CDG60_13025 7e1894f5639aee289e6061f9e0a4bf91 53 TIGRFAM TIGR03510 XapX: XapX domain 4 50 1.2E-20 T 23-10-2018 IPR020017 XapX domain CDG60_14415 f4fa5a7d55822312cf879781f2a21109 292 Gene3D G3DSA:1.10.4200.10 168 286 2.9E-7 T 23-10-2018 CDG60_14415 f4fa5a7d55822312cf879781f2a21109 292 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 18 285 5.0E-87 T 23-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CDG60_14415 f4fa5a7d55822312cf879781f2a21109 292 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 23 281 1.2E-69 T 23-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CDG60_17815 8171bee7118db6696b50f19d0f46713f 474 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 275 290 - T 23-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDG60_17815 8171bee7118db6696b50f19d0f46713f 474 SUPERFAMILY SSF54368 44 146 3.92E-6 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_17815 8171bee7118db6696b50f19d0f46713f 474 Gene3D G3DSA:3.30.590.10 146 471 6.6E-88 T 23-10-2018 CDG60_17815 8171bee7118db6696b50f19d0f46713f 474 Pfam PF00120 Glutamine synthetase, catalytic domain 150 471 9.3E-86 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_17815 8171bee7118db6696b50f19d0f46713f 474 SUPERFAMILY SSF55931 149 472 1.23E-82 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDG60_17815 8171bee7118db6696b50f19d0f46713f 474 SMART SM01230 149 395 3.2E-77 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG60_01705 c68076b148e655cc04dbfa8d692862ba 198 SUPERFAMILY SSF46689 2 77 3.09E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_01705 c68076b148e655cc04dbfa8d692862ba 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.1E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01705 c68076b148e655cc04dbfa8d692862ba 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.1E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01705 c68076b148e655cc04dbfa8d692862ba 198 Gene3D G3DSA:1.10.357.10 13 198 1.2E-22 T 23-10-2018 CDG60_01705 c68076b148e655cc04dbfa8d692862ba 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG60_01705 c68076b148e655cc04dbfa8d692862ba 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 6.3E-14 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_16440 c6506057c86765a15277c8f7820fc66f 364 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.8E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16440 c6506057c86765a15277c8f7820fc66f 364 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16440 c6506057c86765a15277c8f7820fc66f 364 Pfam PF16074 Type IV Pilus-assembly protein W 248 356 4.9E-14 T 23-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CDG60_16440 c6506057c86765a15277c8f7820fc66f 364 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.4E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_12435 04451f6e4b81dea90611197c02789e8c 333 Gene3D G3DSA:1.10.530.10 76 327 7.8E-92 T 23-10-2018 CDG60_12435 04451f6e4b81dea90611197c02789e8c 333 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 330 9.6E-92 T 23-10-2018 IPR011757 Lytic transglycosylase MltB CDG60_12435 04451f6e4b81dea90611197c02789e8c 333 SUPERFAMILY SSF53955 20 332 4.22E-79 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_12435 04451f6e4b81dea90611197c02789e8c 333 Gene3D G3DSA:1.10.8.350 43 209 7.8E-92 T 23-10-2018 CDG60_12435 04451f6e4b81dea90611197c02789e8c 333 Pfam PF13406 Transglycosylase SLT domain 35 327 5.1E-86 T 23-10-2018 IPR031304 Transglycosylase SLT domain 2 CDG60_11960 6597dd9570c5e551e7256c1d2ec885e5 56 Gene3D G3DSA:2.10.70.10 19 56 8.6E-18 T 23-10-2018 CDG60_11960 6597dd9570c5e551e7256c1d2ec885e5 56 Pfam PF10636 Hemin uptake protein hemP 21 56 1.4E-16 T 23-10-2018 IPR019600 Hemin uptake protein HemP CDG60_13865 66a81cf3677b0c780a7cd64642093a28 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13865 66a81cf3677b0c780a7cd64642093a28 169 Gene3D G3DSA:3.40.30.10 86 168 2.2E-23 T 23-10-2018 CDG60_13865 66a81cf3677b0c780a7cd64642093a28 169 PIRSF PIRSF000216 5 169 8.5E-50 T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13865 66a81cf3677b0c780a7cd64642093a28 169 Gene3D G3DSA:1.10.10.1590 16 85 1.3E-16 T 23-10-2018 CDG60_13865 66a81cf3677b0c780a7cd64642093a28 169 SUPERFAMILY SSF52833 19 168 4.81E-47 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_13865 66a81cf3677b0c780a7cd64642093a28 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 25 168 2.5E-47 T 23-10-2018 CDG60_13865 66a81cf3677b0c780a7cd64642093a28 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 25 168 1.1E-46 T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_01125 94c1b2e11cebe0cd8725a3f48c1886be 389 PIRSF PIRSF000390 1 389 3.7E-114 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG60_01125 94c1b2e11cebe0cd8725a3f48c1886be 389 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 381 6.4E-94 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG60_01125 94c1b2e11cebe0cd8725a3f48c1886be 389 Gene3D G3DSA:3.90.1150.10 257 388 6.0E-15 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_01125 94c1b2e11cebe0cd8725a3f48c1886be 389 SUPERFAMILY SSF53383 9 386 1.36E-100 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_01125 94c1b2e11cebe0cd8725a3f48c1886be 389 Gene3D G3DSA:3.40.640.10 5 256 1.2E-84 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 2.5E-121 T 23-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 SMART SM01400 4 121 3.3E-77 T 23-10-2018 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 Gene3D G3DSA:3.40.50.2020 7 302 8.4E-131 T 23-10-2018 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 23-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 313 3.0E-29 T 23-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 48.411 T 23-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.3E-49 T 23-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 SUPERFAMILY SSF53271 69 306 3.09E-65 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_05415 8b2b0cfa23c3532e91ad45463bf2f74f 317 Gene3D G3DSA:3.40.50.2020 148 290 8.4E-131 T 23-10-2018 CDG60_07605 cf52139f8cec51756b4050f393390310 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 9.0E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_07605 cf52139f8cec51756b4050f393390310 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 9.0E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_07605 cf52139f8cec51756b4050f393390310 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 9.0E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_07605 cf52139f8cec51756b4050f393390310 161 SUPERFAMILY SSF46785 6 67 1.22E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_07605 cf52139f8cec51756b4050f393390310 161 Gene3D G3DSA:3.30.70.920 62 145 4.2E-26 T 23-10-2018 CDG60_07605 cf52139f8cec51756b4050f393390310 161 Gene3D G3DSA:1.10.10.10 1 61 1.0E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_07605 cf52139f8cec51756b4050f393390310 161 SMART SM00344 8 117 3.7E-46 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG60_07605 cf52139f8cec51756b4050f393390310 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 6.5E-19 T 23-10-2018 CDG60_07605 cf52139f8cec51756b4050f393390310 161 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 2.1E-25 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG60_07605 cf52139f8cec51756b4050f393390310 161 SUPERFAMILY SSF54909 73 150 1.61E-20 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_06330 283a5ae26a5c8535f6753cd80ed51ca2 294 PIRSF PIRSF018266 11 294 5.0E-57 T 23-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CDG60_06330 283a5ae26a5c8535f6753cd80ed51ca2 294 Gene3D G3DSA:3.55.50.30 218 294 4.4E-7 T 23-10-2018 CDG60_06330 283a5ae26a5c8535f6753cd80ed51ca2 294 Pfam PF16344 Domain of unknown function (DUF4974) 203 283 9.1E-11 T 23-10-2018 IPR032508 Protein FecR, C-terminal CDG60_06330 283a5ae26a5c8535f6753cd80ed51ca2 294 Gene3D G3DSA:2.60.120.1440 71 214 8.6E-22 T 23-10-2018 CDG60_06330 283a5ae26a5c8535f6753cd80ed51ca2 294 Pfam PF04773 FecR protein 81 177 3.5E-15 T 23-10-2018 IPR006860 FecR protein CDG60_10915 80c16ec53542ef93a6cc68d8dfcacc01 429 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 423 3.7E-22 T 23-10-2018 IPR010352 Protein of unknown function DUF945 CDG60_04260 ce96a79b3c2cdcc7140f0231cb404fad 214 Pfam PF03006 Haemolysin-III related 12 206 9.5E-34 T 23-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CDG60_04260 ce96a79b3c2cdcc7140f0231cb404fad 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 213 1.6E-57 T 23-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 Gene3D G3DSA:1.10.530.10 89 341 2.1E-82 T 23-10-2018 CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 Pfam PF13406 Transglycosylase SLT domain 47 342 2.9E-104 T 23-10-2018 IPR031304 Transglycosylase SLT domain 2 CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 Gene3D G3DSA:1.10.8.350 61 222 2.1E-82 T 23-10-2018 CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 Gene3D G3DSA:1.10.101.10 349 422 2.5E-9 T 23-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 Pfam PF01471 Putative peptidoglycan binding domain 363 417 1.1E-11 T 23-10-2018 IPR002477 Peptidoglycan binding-like CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 46 346 2.9E-108 T 23-10-2018 IPR011970 Lytic murein transglycosylase CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 SUPERFAMILY SSF47090 350 419 9.42E-14 T 23-10-2018 IPR036365 PGBD-like superfamily CDG60_17985 b5d8c613e948907f60f8671dd226e320 428 SUPERFAMILY SSF53955 40 347 8.06E-95 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_15990 06ae1990309f5ff9c58eed187207715f 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 3.4E-85 T 23-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15990 06ae1990309f5ff9c58eed187207715f 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.339 T 23-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15990 06ae1990309f5ff9c58eed187207715f 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 23-10-2018 IPR019926 Ribosomal protein L3, conserved site CDG60_15990 06ae1990309f5ff9c58eed187207715f 212 SUPERFAMILY SSF50447 2 211 2.56E-77 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG60_15990 06ae1990309f5ff9c58eed187207715f 212 Pfam PF00297 Ribosomal protein L3 49 184 3.1E-14 T 23-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15990 06ae1990309f5ff9c58eed187207715f 212 Gene3D G3DSA:2.40.50.620 34 92 5.3E-14 T 23-10-2018 CDG60_15990 06ae1990309f5ff9c58eed187207715f 212 Gene3D G3DSA:2.40.30.10 132 212 8.2E-14 T 23-10-2018 CDG60_16460 36b171f0c251cb675d151bff437f5927 248 Gene3D G3DSA:1.10.1270.20 170 248 4.0E-31 T 23-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG60_16460 36b171f0c251cb675d151bff437f5927 248 SUPERFAMILY SSF75217 1 244 1.64E-95 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_16460 36b171f0c251cb675d151bff437f5927 248 PIRSF PIRSF000386 1 248 2.8E-90 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG60_16460 36b171f0c251cb675d151bff437f5927 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 1.1E-53 T 23-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG60_16460 36b171f0c251cb675d151bff437f5927 248 Gene3D G3DSA:3.40.1280.10 1 169 1.2E-61 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_16460 36b171f0c251cb675d151bff437f5927 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 102.689 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG60_16460 36b171f0c251cb675d151bff437f5927 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 238 1.4E-89 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG60_03510 b54d77585e263378bc8e3f604d7f8adb 349 Pfam PF09588 YqaJ-like viral recombinase domain 42 183 5.1E-35 T 23-10-2018 IPR019080 YqaJ viral recombinase CDG60_03510 b54d77585e263378bc8e3f604d7f8adb 349 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 37 193 9.2E-38 T 23-10-2018 IPR017482 Putative phage-type endonuclease CDG60_03510 b54d77585e263378bc8e3f604d7f8adb 349 SUPERFAMILY SSF52980 40 225 2.14E-31 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_03510 b54d77585e263378bc8e3f604d7f8adb 349 Gene3D G3DSA:3.90.320.10 39 247 5.5E-38 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDG60_13205 7800229debf7412554e0852de38b2e8f 311 Gene3D G3DSA:3.40.50.1820 24 300 1.3E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_13205 7800229debf7412554e0852de38b2e8f 311 SUPERFAMILY SSF53474 7 296 3.65E-59 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_13205 7800229debf7412554e0852de38b2e8f 311 Pfam PF00561 alpha/beta hydrolase fold 40 165 8.9E-17 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_15570 055a8a7ed6dce47acc62ef203074076d 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 285 5.9E-69 T 23-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CDG60_15570 055a8a7ed6dce47acc62ef203074076d 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 486 3.8E-48 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CDG60_15570 055a8a7ed6dce47acc62ef203074076d 508 Gene3D G3DSA:3.20.130.10 307 487 3.3E-60 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CDG60_15570 055a8a7ed6dce47acc62ef203074076d 508 SUPERFAMILY SSF117457 317 486 3.01E-64 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CDG60_15570 055a8a7ed6dce47acc62ef203074076d 508 Pfam PF05681 Fumarate hydratase (Fumerase) 12 285 2.1E-102 T 23-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CDG60_15570 055a8a7ed6dce47acc62ef203074076d 508 PIRSF PIRSF001394 1 505 1.6E-212 T 23-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CDG60_15570 055a8a7ed6dce47acc62ef203074076d 508 Pfam PF05683 Fumarase C-terminus 289 488 7.9E-78 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 PRINTS PR01438 Universal stress protein signature 1 11 6.3E-9 T 23-10-2018 IPR006015 Universal stress protein A CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 PRINTS PR01438 Universal stress protein signature 258 280 6.3E-9 T 23-10-2018 IPR006015 Universal stress protein A CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 PRINTS PR01438 Universal stress protein signature 240 252 6.3E-9 T 23-10-2018 IPR006015 Universal stress protein A CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 Gene3D G3DSA:3.40.50.12370 2 280 1.8E-44 T 23-10-2018 CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 Pfam PF09095 Domain of unknown function (DUF1926) 82 134 4.1E-4 T 23-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 SUPERFAMILY SSF52402 1 157 2.93E-10 T 23-10-2018 CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 Pfam PF00582 Universal stress protein family 212 280 1.3E-11 T 23-10-2018 IPR006016 UspA CDG60_11370 f73ace56c9ede0d783671cba4abc3bdd 280 SUPERFAMILY SSF52402 166 280 1.51E-18 T 23-10-2018 CDG60_16230 28b518ab24696aba5fbae84fc50ccbf6 239 Pfam PF01925 Sulfite exporter TauE/SafE 6 234 6.5E-23 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_14605 1475a9780b7baa66eba982034d45fb94 166 SUPERFAMILY SSF54637 27 164 4.52E-19 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_14605 1475a9780b7baa66eba982034d45fb94 166 Pfam PF03061 Thioesterase superfamily 69 155 1.1E-11 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG60_14605 1475a9780b7baa66eba982034d45fb94 166 Gene3D G3DSA:3.10.129.10 9 166 2.1E-40 T 23-10-2018 CDG60_14605 1475a9780b7baa66eba982034d45fb94 166 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 45 160 6.3E-11 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CDG60_16970 afa043d34c312480857fc0e991453b99 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 23-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG60_16970 afa043d34c312480857fc0e991453b99 197 SUPERFAMILY SSF54211 4 88 2.66E-33 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_16970 afa043d34c312480857fc0e991453b99 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 23-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG60_16970 afa043d34c312480857fc0e991453b99 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 1.8E-63 T 23-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG60_16970 afa043d34c312480857fc0e991453b99 197 Gene3D G3DSA:3.30.230.40 92 197 1.4E-38 T 23-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CDG60_16970 afa043d34c312480857fc0e991453b99 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 41.126 T 23-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG60_16970 afa043d34c312480857fc0e991453b99 197 Gene3D G3DSA:3.30.230.40 1 91 1.0E-37 T 23-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CDG60_16970 afa043d34c312480857fc0e991453b99 197 SUPERFAMILY SSF54211 90 180 4.17E-35 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_11545 3ce96b2c7f188b6eff13c19e0c6fe251 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 2.3E-6 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_11545 3ce96b2c7f188b6eff13c19e0c6fe251 187 Pfam PF00578 AhpC/TSA family 8 132 4.6E-34 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_11545 3ce96b2c7f188b6eff13c19e0c6fe251 187 SUPERFAMILY SSF52833 1 186 2.14E-58 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_11545 3ce96b2c7f188b6eff13c19e0c6fe251 187 PIRSF PIRSF000239 1 187 1.0E-53 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_11545 3ce96b2c7f188b6eff13c19e0c6fe251 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.9E-103 T 23-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG60_11545 3ce96b2c7f188b6eff13c19e0c6fe251 187 Gene3D G3DSA:3.40.30.10 1 186 4.1E-63 T 23-10-2018 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 SMART SM00434 9 502 1.0E-260 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 951 23.195 T 23-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Gene3D G3DSA:1.10.268.10 368 496 7.9E-218 T 23-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 732 775 8.4E-9 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 853 899 4.3E-15 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 780 814 4.8E-10 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 638 4.0E-6 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 541 588 2.3E-10 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 904 949 1.1E-11 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 509 1.5E-151 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 SUPERFAMILY SSF56719 28 525 1.31E-171 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 SUPERFAMILY SSF101904 536 640 5.75E-33 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 SUPERFAMILY SSF101904 725 959 2.62E-57 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Gene3D G3DSA:3.30.1360.40 234 331 7.9E-218 T 23-10-2018 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Gene3D G3DSA:3.90.199.10 31 524 7.9E-218 T 23-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 642 4.4E-283 T 23-10-2018 CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Gene3D G3DSA:2.120.10.90 691 949 1.9E-67 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG60_06505 7d0fa9eb48d898b90ae0a87b34d4be8c 990 Gene3D G3DSA:2.120.10.90 533 653 1.0E-38 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG60_11305 c50c01abf943f2dbcbc15073c1fcbe89 163 SUPERFAMILY SSF54427 1 162 1.49E-45 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_11305 c50c01abf943f2dbcbc15073c1fcbe89 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 1.7E-90 T 23-10-2018 IPR017640 Anthranilate 1,2-dioxygenase, small subunit GO:0019439 KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 CDG60_11305 c50c01abf943f2dbcbc15073c1fcbe89 163 Gene3D G3DSA:3.10.450.50 6 163 4.5E-40 T 23-10-2018 CDG60_11305 c50c01abf943f2dbcbc15073c1fcbe89 163 Pfam PF00866 Ring hydroxylating beta subunit 16 155 6.9E-44 T 23-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 Gene3D G3DSA:1.20.1260.10 1 154 3.9E-56 T 23-10-2018 IPR012347 Ferritin-like CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.2E-54 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.2E-54 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PRINTS PR00601 Bacterioferritin signature 107 127 4.2E-54 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.2E-54 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PRINTS PR00601 Bacterioferritin signature 86 106 4.2E-54 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PRINTS PR00601 Bacterioferritin signature 65 85 4.2E-54 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.2E-54 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 6.0E-61 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 SUPERFAMILY SSF47240 1 154 4.06E-43 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 PIRSF PIRSF002560 1 154 3.4E-60 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_16570 f1abbc77effa1bf416ff31f12f5ade6e 154 Pfam PF00210 Ferritin-like domain 8 142 3.0E-32 T 23-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CDG60_11380 d011c05d0061a70fe70f9a1ebc029d71 198 SUPERFAMILY SSF54980 131 195 7.12E-7 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG60_11380 d011c05d0061a70fe70f9a1ebc029d71 198 Gene3D G3DSA:3.30.230.30 1 125 1.5E-44 T 23-10-2018 IPR036956 Impact, N-terminal domain superfamily CDG60_11380 d011c05d0061a70fe70f9a1ebc029d71 198 SUPERFAMILY SSF54211 4 122 1.59E-39 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_11380 d011c05d0061a70fe70f9a1ebc029d71 198 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 3.0E-29 T 23-10-2018 IPR001498 Impact, N-terminal CDG60_11380 d011c05d0061a70fe70f9a1ebc029d71 198 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 23-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.105 T 23-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 SUPERFAMILY SSF54747 3 73 4.45E-31 T 23-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.5E-65 T 23-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 Gene3D G3DSA:3.30.1550.10 2 72 3.5E-36 T 23-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 SMART SM00649 9 141 9.8E-85 T 23-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.7E-23 T 23-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 141 - T 23-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 8.0E-16 T 23-10-2018 CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 Gene3D G3DSA:1.10.10.250 73 141 1.8E-26 T 23-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 SUPERFAMILY SSF46906 68 141 7.59E-25 T 23-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDG60_02240 4744757dc1e99c4d184eaf116d76023a 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.7E-32 T 23-10-2018 IPR020784 Ribosomal protein L11, N-terminal CDG60_10130 9c7310f7a19a24ce2987e3951841deaa 221 Gene3D G3DSA:3.40.50.720 1 220 1.9E-48 T 23-10-2018 CDG60_10130 9c7310f7a19a24ce2987e3951841deaa 221 SUPERFAMILY SSF51735 7 211 3.46E-32 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_10130 9c7310f7a19a24ce2987e3951841deaa 221 Pfam PF13460 NAD(P)H-binding 12 203 1.5E-8 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG60_17870 df8c7040e482f9c227f5f4e2780a7031 485 Pfam PF00171 Aldehyde dehydrogenase family 26 477 4.9E-131 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_17870 df8c7040e482f9c227f5f4e2780a7031 485 Gene3D G3DSA:3.40.309.10 260 448 3.6E-140 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_17870 df8c7040e482f9c227f5f4e2780a7031 485 Gene3D G3DSA:3.40.605.10 40 469 3.6E-140 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_17870 df8c7040e482f9c227f5f4e2780a7031 485 SUPERFAMILY SSF53720 7 482 3.27E-125 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_17870 df8c7040e482f9c227f5f4e2780a7031 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG60_03330 841dc5c1fabe5ac22aff53e1247b6e49 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.6E-13 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_03330 841dc5c1fabe5ac22aff53e1247b6e49 234 Pfam PF13972 Bacterial transcriptional repressor 62 208 5.5E-36 T 23-10-2018 IPR025722 Bacterial transcriptional repressor TetR CDG60_03330 841dc5c1fabe5ac22aff53e1247b6e49 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.1E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_03330 841dc5c1fabe5ac22aff53e1247b6e49 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.1E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_03330 841dc5c1fabe5ac22aff53e1247b6e49 234 Gene3D G3DSA:1.10.357.10 4 222 1.7E-63 T 23-10-2018 CDG60_03330 841dc5c1fabe5ac22aff53e1247b6e49 234 SUPERFAMILY SSF46689 7 80 3.93E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_02185 e8997ddb5fcac89dac947a35638bf55e 218 SUPERFAMILY SSF49879 2 100 2.3E-24 T 23-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CDG60_02185 e8997ddb5fcac89dac947a35638bf55e 218 Gene3D G3DSA:2.60.200.20 2 99 2.1E-24 T 23-10-2018 CDG60_02185 e8997ddb5fcac89dac947a35638bf55e 218 Pfam PF00498 FHA domain 24 86 1.4E-18 T 23-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDG60_02185 e8997ddb5fcac89dac947a35638bf55e 218 SMART SM00240 22 72 1.2E-10 T 23-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDG60_14175 7150a483fa25f31bdaf2e8481c7b4508 310 SUPERFAMILY SSF54593 5 286 6.28E-32 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_14175 7150a483fa25f31bdaf2e8481c7b4508 310 Gene3D G3DSA:3.10.180.10 6 131 8.3E-14 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_14175 7150a483fa25f31bdaf2e8481c7b4508 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 273 3.6E-9 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG60_14175 7150a483fa25f31bdaf2e8481c7b4508 310 Gene3D G3DSA:3.10.180.10 148 305 5.9E-34 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_08335 3aaa32161b5522e61fc0ce7214157fbf 381 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 381 1.1E-152 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_08335 3aaa32161b5522e61fc0ce7214157fbf 381 PIRSF PIRSF000267 2 380 1.8E-121 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_08335 3aaa32161b5522e61fc0ce7214157fbf 381 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 364 3.7E-105 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_00830 3052f273a42a2b0c3647dfa1f1ab09e1 287 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 11 276 1.0E-68 T 23-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CDG60_00830 3052f273a42a2b0c3647dfa1f1ab09e1 287 Gene3D G3DSA:3.60.130.10 8 283 1.2E-96 T 23-10-2018 CDG60_00830 3052f273a42a2b0c3647dfa1f1ab09e1 287 SUPERFAMILY SSF51197 8 284 6.41E-96 T 23-10-2018 CDG60_11765 86b5d041ecdf3ee03f110e8ee501d72f 194 SUPERFAMILY SSF50475 4 187 1.86E-36 T 23-10-2018 CDG60_11765 86b5d041ecdf3ee03f110e8ee501d72f 194 Pfam PF01613 Flavin reductase like domain 20 163 6.0E-19 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_11765 86b5d041ecdf3ee03f110e8ee501d72f 194 SMART SM00903 15 162 6.2E-18 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_11765 86b5d041ecdf3ee03f110e8ee501d72f 194 Gene3D G3DSA:2.30.110.10 1 190 5.6E-47 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 Pfam PF03466 LysR substrate binding domain 91 294 2.3E-31 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 SUPERFAMILY SSF53850 91 298 1.57E-36 T 23-10-2018 CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 SUPERFAMILY SSF46785 6 114 7.69E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 3.3E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 Gene3D G3DSA:3.40.190.290 93 295 2.6E-53 T 23-10-2018 CDG60_09165 c2b0229ac99e29a6d32cbb98615537c5 304 Gene3D G3DSA:1.10.10.10 5 90 8.0E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10490 ced0d4442526b9c84235b1ea168ccd89 306 Gene3D G3DSA:3.40.190.10 90 292 6.6E-67 T 23-10-2018 CDG60_10490 ced0d4442526b9c84235b1ea168ccd89 306 Gene3D G3DSA:1.10.10.10 1 89 1.2E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10490 ced0d4442526b9c84235b1ea168ccd89 306 Gene3D G3DSA:3.40.190.10 163 271 6.6E-67 T 23-10-2018 CDG60_10490 ced0d4442526b9c84235b1ea168ccd89 306 SUPERFAMILY SSF46785 1 112 1.76E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_10490 ced0d4442526b9c84235b1ea168ccd89 306 Pfam PF03466 LysR substrate binding domain 90 294 8.6E-34 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_10490 ced0d4442526b9c84235b1ea168ccd89 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.2E-13 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_10490 ced0d4442526b9c84235b1ea168ccd89 306 SUPERFAMILY SSF53850 89 294 9.0E-34 T 23-10-2018 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 990 0.0 T 23-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 SUPERFAMILY SSF89550 3 254 1.53E-12 T 23-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 Gene3D G3DSA:1.10.10.1600 428 511 8.1E-26 T 23-10-2018 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 SUPERFAMILY SSF160975 823 873 7.32E-5 T 23-10-2018 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 Pfam PF02811 PHP domain 5 162 1.2E-27 T 23-10-2018 IPR004013 PHP domain GO:0003824 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 285 723 1.3E-164 T 23-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 Pfam PF14579 Helix-hairpin-helix motif 799 888 4.4E-27 T 23-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 Gene3D G3DSA:3.20.20.140 1 261 4.0E-78 T 23-10-2018 CDG60_11250 acf69a05fbbf216155bec567da78f462 1190 SMART SM00481 4 71 2.3E-16 T 23-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDG60_11265 a8e595eca251b6be759378632789c744 305 SUPERFAMILY SSF48452 195 293 3.16E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_11265 a8e595eca251b6be759378632789c744 305 Gene3D G3DSA:1.25.40.10 145 296 1.5E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 Gene3D G3DSA:3.90.380.10 243 368 4.5E-7 T 23-10-2018 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 3.0E-20 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 3.0E-20 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 3.0E-20 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 3.0E-20 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 3.0E-20 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 181 369 2.0E-20 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 Gene3D G3DSA:2.102.10.10 43 165 4.6E-48 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 SUPERFAMILY SSF55961 158 369 2.12E-32 T 23-10-2018 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 Gene3D G3DSA:3.90.380.10 21 214 4.6E-48 T 23-10-2018 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 Pfam PF00355 Rieske [2Fe-2S] domain 43 131 4.2E-19 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG60_12935 dee69bc6da3bb6242688b6a0fac90742 371 SUPERFAMILY SSF50022 16 157 4.58E-44 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_06350 865305b95920e9f9ad6875d26858fec8 534 SUPERFAMILY SSF53649 28 534 3.93E-123 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_06350 865305b95920e9f9ad6875d26858fec8 534 Pfam PF00245 Alkaline phosphatase 50 533 6.4E-99 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06350 865305b95920e9f9ad6875d26858fec8 534 SMART SM00098 50 534 2.6E-72 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06350 865305b95920e9f9ad6875d26858fec8 534 PRINTS PR00113 Alkaline phosphatase signature 217 227 2.3E-38 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06350 865305b95920e9f9ad6875d26858fec8 534 PRINTS PR00113 Alkaline phosphatase signature 49 69 2.3E-38 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06350 865305b95920e9f9ad6875d26858fec8 534 PRINTS PR00113 Alkaline phosphatase signature 158 178 2.3E-38 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_06350 865305b95920e9f9ad6875d26858fec8 534 PRINTS PR00113 Alkaline phosphatase signature 297 326 2.3E-38 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 Pfam PF02803 Thiolase, C-terminal domain 266 387 6.8E-45 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 Gene3D G3DSA:3.40.47.10 124 386 2.1E-144 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 SUPERFAMILY SSF53901 3 266 8.93E-82 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 4 387 5.0E-132 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 82 100 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 Gene3D G3DSA:3.40.47.10 3 272 2.1E-144 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 Pfam PF00108 Thiolase, N-terminal domain 2 259 2.3E-87 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 SUPERFAMILY SSF53901 267 388 3.41E-39 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 PIRSF PIRSF000429 1 389 5.0E-117 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_11500 0bc648196d00411c8f7c4bff62ec042e 389 ProSitePatterns PS00099 Thiolases active site. 370 383 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG60_00080 cf3daefaa1e006c21db92914b557a130 224 Pfam PF00481 Protein phosphatase 2C 25 135 2.6E-4 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG60_00080 cf3daefaa1e006c21db92914b557a130 224 SUPERFAMILY SSF81606 31 196 7.06E-17 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG60_00080 cf3daefaa1e006c21db92914b557a130 224 SMART SM00332 2 222 0.0057 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG60_00080 cf3daefaa1e006c21db92914b557a130 224 Gene3D G3DSA:3.60.40.10 25 222 1.2E-19 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 23-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 PIRSF PIRSF005572 2 385 4.1E-128 T 23-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 Gene3D G3DSA:3.40.640.10 16 263 5.4E-157 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 396 53.19 T 23-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 405 1.8E-210 T 23-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 SUPERFAMILY SSF53383 3 391 2.61E-105 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 Gene3D G3DSA:3.90.1150.10 5 376 5.4E-157 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_10070 1cd5e2fefa7a3db445295868e84bb9e0 405 Pfam PF00266 Aminotransferase class-V 5 369 7.2E-81 T 23-10-2018 IPR000192 Aminotransferase class V domain CDG60_09630 c6250cc20af4c0a5442a5a35b8d79e57 165 Pfam PF08875 Domain of unknown function (DUF1833) 12 116 1.8E-5 T 23-10-2018 IPR014974 Domain of unknown function DUF1833 CDG60_04565 93a7676dffa6dc136991f3bf2d1103f9 271 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 11 239 40.27 T 23-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 CDG60_04565 93a7676dffa6dc136991f3bf2d1103f9 271 PIRSF PIRSF037208 4 252 7.9E-99 T 23-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 CDG60_04565 93a7676dffa6dc136991f3bf2d1103f9 271 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 21 91 5.8E-16 T 23-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 CDG60_04565 93a7676dffa6dc136991f3bf2d1103f9 271 SUPERFAMILY SSF55729 85 243 9.9E-28 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_04565 93a7676dffa6dc136991f3bf2d1103f9 271 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 233 1.5E-39 T 23-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 CDG60_13315 7ca586614637b2f534e674426ce8666a 124 SUPERFAMILY SSF52980 10 118 5.9E-15 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_13315 7ca586614637b2f534e674426ce8666a 124 Gene3D G3DSA:3.40.960.10 16 118 1.7E-31 T 23-10-2018 CDG60_13315 7ca586614637b2f534e674426ce8666a 124 Pfam PF04480 Protein of unknown function (DUF559) 7 114 3.5E-34 T 23-10-2018 IPR007569 Protein of unknown function DUF559 CDG60_04650 b960ca96ddb8eaf623a0a3bebe9e91fc 282 Gene3D G3DSA:3.60.20.10 1 258 8.8E-95 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_04650 b960ca96ddb8eaf623a0a3bebe9e91fc 282 SUPERFAMILY SSF56235 2 252 1.21E-45 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_04650 b960ca96ddb8eaf623a0a3bebe9e91fc 282 Pfam PF13230 Glutamine amidotransferases class-II 1 265 5.3E-121 T 23-10-2018 IPR026869 Putative glutamine amidotransferase type 2 CDG60_15940 0e76470ec86ed194bb361931fb802e83 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 9.5E-54 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDG60_15940 0e76470ec86ed194bb361931fb802e83 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.882 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDG60_15940 0e76470ec86ed194bb361931fb802e83 122 SUPERFAMILY SSF50193 1 122 9.42E-51 T 23-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15940 0e76470ec86ed194bb361931fb802e83 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.9E-57 T 23-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CDG60_15940 0e76470ec86ed194bb361931fb802e83 122 SMART SM01374 1 122 1.5E-84 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDG60_15940 0e76470ec86ed194bb361931fb802e83 122 Gene3D G3DSA:2.40.150.20 1 122 8.2E-54 T 23-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15940 0e76470ec86ed194bb361931fb802e83 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_06600 8348727ea55bd41c60ecfc66ef1c36ec 234 Pfam PF00308 Bacterial dnaA protein 36 189 1.3E-11 T 23-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CDG60_06600 8348727ea55bd41c60ecfc66ef1c36ec 234 SUPERFAMILY SSF52540 25 204 7.08E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06600 8348727ea55bd41c60ecfc66ef1c36ec 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 227 3.5E-62 T 23-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CDG60_06600 8348727ea55bd41c60ecfc66ef1c36ec 234 Gene3D G3DSA:3.40.50.300 1 158 1.1E-25 T 23-10-2018 CDG60_14300 6b2b76579e8a054e514161b218bc5e73 329 SUPERFAMILY SSF47240 1 326 2.97E-101 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_14300 6b2b76579e8a054e514161b218bc5e73 329 PIRSF PIRSF000040 1 328 1.2E-104 T 23-10-2018 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 CDG60_14300 6b2b76579e8a054e514161b218bc5e73 329 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 51 274 3.7E-60 T 23-10-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CDG60_14300 6b2b76579e8a054e514161b218bc5e73 329 Gene3D G3DSA:1.10.620.20 1 328 3.3E-111 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDG60_06675 76d2f6bebda000226d69ba8207e55bb5 394 Pfam PF07396 Phosphate-selective porin O and P 100 199 3.5E-6 T 23-10-2018 IPR010870 Phosphate-selective porin O/P CDG60_06675 76d2f6bebda000226d69ba8207e55bb5 394 SUPERFAMILY SSF56935 31 394 1.32E-9 T 23-10-2018 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 PIRSF PIRSF005917 1 278 3.0E-100 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 3.7E-29 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 Gene3D G3DSA:3.30.950.10 112 232 3.5E-39 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 225 36.599 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 SUPERFAMILY SSF53790 4 223 3.66E-80 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 Gene3D G3DSA:3.40.1010.10 1 111 4.1E-45 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 273 9.5E-84 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDG60_06015 44106f2dc7f1c43a36948aa6af211c98 281 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 23-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 CDG60_04910 0f82ccf6772015d55bebb8500c2d51e1 242 Gene3D G3DSA:3.40.50.1820 2 234 5.0E-12 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04910 0f82ccf6772015d55bebb8500c2d51e1 242 SUPERFAMILY SSF53474 4 238 6.41E-10 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_03885 42c5649624b5ff1888658dffb3583c08 209 Gene3D G3DSA:2.30.110.10 1 207 1.3E-61 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG60_03885 42c5649624b5ff1888658dffb3583c08 209 Pfam PF04299 Putative FMN-binding domain 1 167 1.2E-54 T 23-10-2018 IPR007396 Transcriptional regulator PAI 2-type CDG60_03885 42c5649624b5ff1888658dffb3583c08 209 SUPERFAMILY SSF50475 11 194 6.04E-34 T 23-10-2018 CDG60_03885 42c5649624b5ff1888658dffb3583c08 209 PIRSF PIRSF010372 1 208 1.8E-66 T 23-10-2018 IPR007396 Transcriptional regulator PAI 2-type CDG60_17955 42725e7674d619fbb1eb8b18383c348c 266 PRINTS PR00625 DnaJ domain signature 224 239 4.4E-5 T 23-10-2018 IPR001623 DnaJ domain CDG60_17955 42725e7674d619fbb1eb8b18383c348c 266 PRINTS PR00625 DnaJ domain signature 206 224 4.4E-5 T 23-10-2018 IPR001623 DnaJ domain CDG60_17955 42725e7674d619fbb1eb8b18383c348c 266 Gene3D G3DSA:1.10.287.110 194 264 3.4E-11 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_17955 42725e7674d619fbb1eb8b18383c348c 266 SMART SM00271 203 266 6.2E-8 T 23-10-2018 IPR001623 DnaJ domain CDG60_17955 42725e7674d619fbb1eb8b18383c348c 266 Pfam PF00226 DnaJ domain 207 241 4.8E-8 T 23-10-2018 IPR001623 DnaJ domain CDG60_17955 42725e7674d619fbb1eb8b18383c348c 266 SUPERFAMILY SSF46565 204 260 9.81E-13 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_13840 ba3981ff0a722a11c918ae734584fed2 174 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 162 1.2E-33 T 23-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13840 ba3981ff0a722a11c918ae734584fed2 174 Gene3D G3DSA:1.20.120.1200 1 164 3.6E-45 T 23-10-2018 CDG60_13635 7d31156df59fd8bf0ad685556b253b9c 122 SUPERFAMILY SSF52172 1 120 6.12E-38 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_13635 7d31156df59fd8bf0ad685556b253b9c 122 Gene3D G3DSA:3.40.50.12740 1 122 2.2E-41 T 23-10-2018 CDG60_13635 7d31156df59fd8bf0ad685556b253b9c 122 Pfam PF00072 Response regulator receiver domain 4 115 1.4E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_13635 7d31156df59fd8bf0ad685556b253b9c 122 SMART SM00448 2 115 1.3E-37 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_00655 30c63efb9b0182b8dab48711add81214 401 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 88 134 1.9E-11 T 23-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDG60_00655 30c63efb9b0182b8dab48711add81214 401 Pfam PF01610 Transposase 153 392 2.2E-64 T 23-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDG60_08065 be41bb780ae59e3f0008182c2bb5a59a 412 Gene3D G3DSA:3.40.50.10540 4 363 1.2E-136 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily CDG60_08065 be41bb780ae59e3f0008182c2bb5a59a 412 SUPERFAMILY SSF89796 1 403 7.72E-137 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily CDG60_08065 be41bb780ae59e3f0008182c2bb5a59a 412 Gene3D G3DSA:3.30.1540.10 235 326 1.2E-136 T 23-10-2018 CDG60_08065 be41bb780ae59e3f0008182c2bb5a59a 412 Pfam PF02515 CoA-transferase family III 4 381 1.4E-133 T 23-10-2018 IPR003673 CoA-transferase family III GO:0003824 CDG60_10530 72cab54337011df366b2c97ffa05b586 277 Pfam PF00106 short chain dehydrogenase 3 205 2.0E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.5E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.5E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 6.5E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.5E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.5E-19 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.3E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.3E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 8.3E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10530 72cab54337011df366b2c97ffa05b586 277 Gene3D G3DSA:3.40.50.720 1 277 1.4E-71 T 23-10-2018 CDG60_10530 72cab54337011df366b2c97ffa05b586 277 SUPERFAMILY SSF51735 2 243 6.18E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 SUPERFAMILY SSF118215 29 442 2.22E-93 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 Gene3D G3DSA:1.10.3860.10 19 461 5.5E-103 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.5E-25 T 23-10-2018 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.5E-25 T 23-10-2018 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 2.5E-25 T 23-10-2018 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.5E-25 T 23-10-2018 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.5E-25 T 23-10-2018 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.5E-25 T 23-10-2018 CDG60_11760 5eba13cefb3b16160a3268e7c88efb5e 463 Pfam PF00375 Sodium:dicarboxylate symporter family 30 442 2.1E-101 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG60_05885 19a54dd3baed763b30d4a76799d84f8f 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 122 1.5E-31 T 23-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDG60_05885 19a54dd3baed763b30d4a76799d84f8f 124 Gene3D G3DSA:1.10.3830.10 8 124 1.2E-35 T 23-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDG60_06470 e24656053baf9d25d1631157f71ba2d2 308 Gene3D G3DSA:1.10.443.10 113 296 1.3E-54 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_06470 e24656053baf9d25d1631157f71ba2d2 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 89 1.5E-15 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG60_06470 e24656053baf9d25d1631157f71ba2d2 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 302 50.134 T 23-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CDG60_06470 e24656053baf9d25d1631157f71ba2d2 308 Gene3D G3DSA:1.10.150.130 1 108 2.5E-23 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_06470 e24656053baf9d25d1631157f71ba2d2 308 SUPERFAMILY SSF56349 6 296 1.53E-55 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_06470 e24656053baf9d25d1631157f71ba2d2 308 Pfam PF00589 Phage integrase family 117 288 8.5E-40 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_05695 3d6267d0fc483802f782c662f6f09669 522 Gene3D G3DSA:3.90.1200.10 303 475 5.6E-5 T 23-10-2018 CDG60_05695 3d6267d0fc483802f782c662f6f09669 522 SUPERFAMILY SSF53448 21 208 1.1E-6 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_05695 3d6267d0fc483802f782c662f6f09669 522 SUPERFAMILY SSF56112 234 441 1.18E-10 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_05695 3d6267d0fc483802f782c662f6f09669 522 Gene3D G3DSA:3.90.550.10 15 209 2.9E-7 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_02440 46a356f87e6185bdcff6a3a633ff4918 336 Pfam PF13533 Biotin-lipoyl like 48 96 1.4E-13 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG60_02440 46a356f87e6185bdcff6a3a633ff4918 336 SUPERFAMILY SSF111369 47 250 5.75E-13 T 23-10-2018 CDG60_02440 46a356f87e6185bdcff6a3a633ff4918 336 Gene3D G3DSA:2.40.50.100 49 81 4.3E-11 T 23-10-2018 CDG60_02440 46a356f87e6185bdcff6a3a633ff4918 336 Gene3D G3DSA:2.40.30.170 213 336 5.0E-24 T 23-10-2018 CDG60_02440 46a356f87e6185bdcff6a3a633ff4918 336 Gene3D G3DSA:1.10.287.470 82 106 4.3E-11 T 23-10-2018 CDG60_02440 46a356f87e6185bdcff6a3a633ff4918 336 Gene3D G3DSA:1.10.287.470 107 174 3.2E-8 T 23-10-2018 CDG60_02440 46a356f87e6185bdcff6a3a633ff4918 336 Pfam PF13437 HlyD family secretion protein 200 282 1.3E-9 T 23-10-2018 CDG60_08145 a8cce06f10a82399585f2f7f61d6308b 378 Pfam PF01098 Cell cycle protein 37 378 3.7E-97 T 23-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_08145 a8cce06f10a82399585f2f7f61d6308b 378 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 27 378 24.78 T 23-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_08145 a8cce06f10a82399585f2f7f61d6308b 378 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 33 378 1.7E-116 T 23-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 Gene3D G3DSA:3.90.190.20 323 469 2.6E-40 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 SUPERFAMILY SSF63418 13 108 1.06E-22 T 23-10-2018 IPR035911 MurE/MurF, N-terminal CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 Gene3D G3DSA:3.40.1390.10 1 93 1.4E-35 T 23-10-2018 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 Pfam PF08245 Mur ligase middle domain 120 303 1.3E-41 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 Pfam PF01225 Mur ligase family, catalytic domain 37 93 2.8E-8 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 SUPERFAMILY SSF53623 114 323 1.83E-53 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 399 1.3E-12 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 SUPERFAMILY SSF53244 325 465 6.64E-26 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 14 466 30.665 T 23-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 Gene3D G3DSA:3.40.1190.10 94 322 4.9E-81 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG60_16785 0d9127e10c082fdd0448bf79ca159c6a 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 43 463 1.0E-120 T 23-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 Pfam PF12848 ABC transporter 230 304 7.3E-11 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 551 1.7E-281 T 23-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 SUPERFAMILY SSF52540 302 527 7.01E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 SUPERFAMILY SSF52540 9 244 3.64E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 Pfam PF00005 ABC transporter 22 191 3.2E-27 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 SMART SM00382 348 522 2.0E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 SMART SM00382 31 242 8.3E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 Gene3D G3DSA:3.40.50.300 1 286 2.7E-82 T 23-10-2018 CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 Gene3D G3DSA:3.40.50.300 287 551 3.9E-72 T 23-10-2018 CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 Pfam PF00005 ABC transporter 339 473 4.4E-22 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_16885 e7822893da74d8d773e26b911e94c1b6 553 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_00480 71a8952ef3176a94aba603479c8ffd8e 432 Gene3D G3DSA:1.10.150.20 188 241 2.6E-6 T 23-10-2018 CDG60_00480 71a8952ef3176a94aba603479c8ffd8e 432 Gene3D G3DSA:3.30.70.270 10 165 5.3E-43 T 23-10-2018 CDG60_00480 71a8952ef3176a94aba603479c8ffd8e 432 SUPERFAMILY SSF56672 7 246 1.25E-63 T 23-10-2018 CDG60_00480 71a8952ef3176a94aba603479c8ffd8e 432 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 364 7.4E-9 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_00480 71a8952ef3176a94aba603479c8ffd8e 432 Gene3D G3DSA:2.30.40.20 16 79 5.3E-43 T 23-10-2018 CDG60_00480 71a8952ef3176a94aba603479c8ffd8e 432 Pfam PF13438 Domain of unknown function (DUF4113) 381 429 1.6E-5 T 23-10-2018 IPR025188 Domain of unknown function DUF4113 CDG60_00480 71a8952ef3176a94aba603479c8ffd8e 432 Pfam PF00817 impB/mucB/samB family 11 158 2.7E-36 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 Gene3D G3DSA:1.10.560.10 8 521 2.2E-239 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 9.2E-254 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 SUPERFAMILY SSF48592 7 521 2.98E-78 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 Gene3D G3DSA:3.50.7.10 173 379 2.2E-239 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 Gene3D G3DSA:3.30.260.10 138 410 2.2E-239 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.201 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 6.5E-96 T 23-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 SUPERFAMILY SSF54849 137 204 1.42E-22 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG60_05870 424ec4e5772b08293a79f0cf4481539c 544 SUPERFAMILY SSF52029 184 376 1.26E-83 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG60_09520 fb0c652242d20606f29bb3b2b55d14a6 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 247 4.8E-38 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG60_09520 fb0c652242d20606f29bb3b2b55d14a6 335 Gene3D G3DSA:3.90.25.10 194 328 5.7E-81 T 23-10-2018 CDG60_09520 fb0c652242d20606f29bb3b2b55d14a6 335 SUPERFAMILY SSF51735 2 330 9.07E-57 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_09520 fb0c652242d20606f29bb3b2b55d14a6 335 Gene3D G3DSA:3.40.50.720 2 316 5.7E-81 T 23-10-2018 CDG60_07480 52ea34197be6cc83977e668d79808cf7 439 Gene3D G3DSA:1.20.1250.20 9 424 5.4E-30 T 23-10-2018 CDG60_07480 52ea34197be6cc83977e668d79808cf7 439 SUPERFAMILY SSF103473 6 426 1.19E-33 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_07480 52ea34197be6cc83977e668d79808cf7 439 Pfam PF07690 Major Facilitator Superfamily 17 199 8.0E-12 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_07480 52ea34197be6cc83977e668d79808cf7 439 Pfam PF07690 Major Facilitator Superfamily 244 438 1.3E-8 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_08470 88e4030fd5d52d82c975547d4d2a558a 137 SUPERFAMILY SSF48498 20 136 5.25E-6 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_08470 88e4030fd5d52d82c975547d4d2a558a 137 Gene3D G3DSA:1.10.357.10 1 137 2.1E-17 T 23-10-2018 CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 Gene3D G3DSA:3.40.50.720 2 244 1.6E-55 T 23-10-2018 CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 SUPERFAMILY SSF51735 3 234 6.09E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.5E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.5E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.5E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.5E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.5E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.4E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.4E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.4E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 0.0091 T 23-10-2018 CDG60_09425 7122a8a39acc36aa1fd7c55f6e4e9743 247 Pfam PF00106 short chain dehydrogenase 3 194 1.4E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 104 289 1.2E-47 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 Pfam PF07549 SecD/SecF GG Motif 41 68 2.8E-9 T 23-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 SUPERFAMILY SSF82866 82 299 1.31E-38 T 23-10-2018 CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 Gene3D G3DSA:1.20.1640.10 106 303 1.8E-12 T 23-10-2018 CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 19 302 25.919 T 23-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 47 291 2.8E-76 T 23-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 Pfam PF02355 Protein export membrane protein 123 298 7.2E-61 T 23-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.0E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 PRINTS PR01755 Bacterial translocase SecF protein signature 46 61 1.0E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.0E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG60_03710 6283f68d868edbdac3ecda15aa602859 322 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.0E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG60_04475 01de4537257b078a53c231ae2ce1b70f 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 177 1.4E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_04475 01de4537257b078a53c231ae2ce1b70f 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 1.7E-28 T 23-10-2018 CDG60_04475 01de4537257b078a53c231ae2ce1b70f 214 SUPERFAMILY SSF56784 1 214 9.65E-55 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_04475 01de4537257b078a53c231ae2ce1b70f 214 Gene3D G3DSA:1.10.150.240 16 84 2.8E-59 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG60_04475 01de4537257b078a53c231ae2ce1b70f 214 Gene3D G3DSA:3.40.50.1000 6 204 2.8E-59 T 23-10-2018 IPR023214 HAD superfamily CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 Gene3D G3DSA:3.40.50.1220 191 362 7.6E-61 T 23-10-2018 CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 3.6E-46 T 23-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 Gene3D G3DSA:3.40.50.970 366 575 1.4E-63 T 23-10-2018 CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 3.3E-251 T 23-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 1.6E-58 T 23-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 Gene3D G3DSA:3.40.50.970 1 182 1.5E-72 T 23-10-2018 CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 SUPERFAMILY SSF52518 371 570 7.32E-66 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 SUPERFAMILY SSF52467 190 362 1.51E-64 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 6.2E-44 T 23-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CDG60_15210 7d3d1ecc57c427a7bbd837614b873c94 575 SUPERFAMILY SSF52518 4 179 2.99E-63 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 SUPERFAMILY SSF50129 2 95 1.41E-30 T 23-10-2018 IPR011032 GroES-like superfamily CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 SMART SM00883 3 94 6.5E-51 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 95 25.086 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 93 3.8E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.2E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.2E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.2E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.2E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG60_05865 edd355d86500e22a9da818e91ae8620a 96 Gene3D G3DSA:2.30.33.40 1 96 4.2E-35 T 23-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CDG60_08155 12fb6ffc37bfa85e3db2797c2d1457fd 296 Gene3D G3DSA:3.10.129.90 9 291 2.0E-72 T 23-10-2018 CDG60_08155 12fb6ffc37bfa85e3db2797c2d1457fd 296 Pfam PF13622 Thioesterase-like superfamily 38 288 6.8E-39 T 23-10-2018 CDG60_08155 12fb6ffc37bfa85e3db2797c2d1457fd 296 SUPERFAMILY SSF54637 12 117 3.29E-25 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_08155 12fb6ffc37bfa85e3db2797c2d1457fd 296 SUPERFAMILY SSF54637 121 289 5.96E-35 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 Pfam PF00462 Glutaredoxin 4 64 2.0E-22 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 Gene3D G3DSA:3.40.30.10 1 84 3.3E-30 T 23-10-2018 CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 PRINTS PR00160 Glutaredoxin signature 4 22 6.4E-14 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 PRINTS PR00160 Glutaredoxin signature 47 60 6.4E-14 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 PRINTS PR00160 Glutaredoxin signature 61 74 6.4E-14 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 SUPERFAMILY SSF52833 1 83 1.09E-28 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_15290 8d7ef234414d9cfecd8ca8b4c4cb3d6e 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 8.8E-33 T 23-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CDG60_10465 fce526e43f94435a6aad8ffc00fdc7ef 153 Pfam PF04284 Protein of unknown function (DUF441) 12 150 2.7E-48 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CDG60_10465 fce526e43f94435a6aad8ffc00fdc7ef 153 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 20 135 5.0E-32 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CDG60_10465 fce526e43f94435a6aad8ffc00fdc7ef 153 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 8 153 18.902 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 SUPERFAMILY SSF47240 1 154 8.49E-47 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 PRINTS PR00601 Bacterioferritin signature 3 22 1.9E-39 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 PRINTS PR00601 Bacterioferritin signature 44 64 1.9E-39 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 PRINTS PR00601 Bacterioferritin signature 85 105 1.9E-39 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 PRINTS PR00601 Bacterioferritin signature 106 126 1.9E-39 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 PRINTS PR00601 Bacterioferritin signature 23 43 1.9E-39 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 PRINTS PR00601 Bacterioferritin signature 128 149 1.9E-39 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 PIRSF PIRSF002560 1 154 2.0E-58 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 1.8E-45 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 Gene3D G3DSA:1.20.1260.10 1 154 1.1E-58 T 23-10-2018 IPR012347 Ferritin-like CDG60_04900 4548920613977084ac1e62d12dfa88b5 154 Pfam PF00210 Ferritin-like domain 8 143 2.8E-34 T 23-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 138 3.3E-41 T 23-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 139 6.9E-35 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 139 22.454 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 3.5E-10 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 3.5E-10 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.5E-10 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 SUPERFAMILY SSF81330 13 134 4.45E-34 T 23-10-2018 IPR036019 Gated mechanosensitive channel CDG60_14715 771608fc7fa17139ba53a66b3e6599c4 141 Gene3D G3DSA:1.10.1200.120 3 141 1.7E-39 T 23-10-2018 IPR036019 Gated mechanosensitive channel CDG60_09000 ab43275a5e4360e4bb2bf6aa3a1a196b 222 SMART SM00448 1 112 2.2E-31 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_09000 ab43275a5e4360e4bb2bf6aa3a1a196b 222 Pfam PF00072 Response regulator receiver domain 3 112 7.2E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_09000 ab43275a5e4360e4bb2bf6aa3a1a196b 222 Gene3D G3DSA:3.40.50.2300 1 121 2.2E-36 T 23-10-2018 CDG60_09000 ab43275a5e4360e4bb2bf6aa3a1a196b 222 SMART SM00862 145 216 1.1E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_09000 ab43275a5e4360e4bb2bf6aa3a1a196b 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 1.1E-20 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_09000 ab43275a5e4360e4bb2bf6aa3a1a196b 222 Gene3D G3DSA:1.10.10.10 122 220 3.9E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09000 ab43275a5e4360e4bb2bf6aa3a1a196b 222 SUPERFAMILY SSF52172 3 173 2.2E-37 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_02450 3c969b2331f5c70867c8865e01b4204d 147 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 139 9.9E-31 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDG60_02450 3c969b2331f5c70867c8865e01b4204d 147 Pfam PF03652 Holliday junction resolvase 9 139 3.0E-34 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDG60_02450 3c969b2331f5c70867c8865e01b4204d 147 SMART SM00732 8 108 1.2E-24 T 23-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CDG60_02450 3c969b2331f5c70867c8865e01b4204d 147 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 20.985 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDG60_02450 3c969b2331f5c70867c8865e01b4204d 147 SUPERFAMILY SSF53098 8 140 1.18E-33 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_02450 3c969b2331f5c70867c8865e01b4204d 147 Gene3D G3DSA:3.30.420.140 7 141 5.5E-34 T 23-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CDG60_01955 a92bc72006fec04a41f39d7234e66b37 434 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_01955 a92bc72006fec04a41f39d7234e66b37 434 SUPERFAMILY SSF53335 25 361 2.52E-35 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_01955 a92bc72006fec04a41f39d7234e66b37 434 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 31 292 5.7E-25 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CDG60_16710 80f170d7f7246b3c2de73a69749d0b8f 196 Pfam PF04011 LemA family 13 195 5.6E-67 T 23-10-2018 IPR007156 LemA CDG60_16710 80f170d7f7246b3c2de73a69749d0b8f 196 Gene3D G3DSA:1.20.1440.20 18 195 4.7E-64 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG60_16710 80f170d7f7246b3c2de73a69749d0b8f 196 SUPERFAMILY SSF140478 27 184 1.96E-52 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG60_04470 575596c22082f3e9c151da1f86990ce5 255 Gene3D G3DSA:3.40.1190.20 1 237 2.3E-78 T 23-10-2018 IPR029056 Ribokinase-like CDG60_04470 575596c22082f3e9c151da1f86990ce5 255 Pfam PF08543 Phosphomethylpyrimidine kinase 12 243 3.8E-69 T 23-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CDG60_04470 575596c22082f3e9c151da1f86990ce5 255 SUPERFAMILY SSF53613 2 240 5.07E-60 T 23-10-2018 IPR029056 Ribokinase-like CDG60_15090 9faaa40dccc8c2e21725c4e24b2a4c17 283 PIRSF PIRSF005052 2 283 6.8E-111 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 CDG60_15090 9faaa40dccc8c2e21725c4e24b2a4c17 283 Pfam PF03668 P-loop ATPase protein family 4 280 5.8E-88 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 CDG60_15090 9faaa40dccc8c2e21725c4e24b2a4c17 283 SUPERFAMILY SSF52540 3 157 9.93E-10 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15090 9faaa40dccc8c2e21725c4e24b2a4c17 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 281 38.04 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 CDG60_14580 5762c59073057eb3eca996742e1bab39 378 SUPERFAMILY SSF56349 87 366 1.47E-53 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_14580 5762c59073057eb3eca996742e1bab39 378 Gene3D G3DSA:1.10.443.10 197 367 1.3E-14 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_14580 5762c59073057eb3eca996742e1bab39 378 Gene3D G3DSA:1.10.150.130 86 194 8.5E-27 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_14580 5762c59073057eb3eca996742e1bab39 378 Pfam PF00589 Phage integrase family 196 356 1.8E-16 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_14580 5762c59073057eb3eca996742e1bab39 378 Gene3D G3DSA:3.30.160.390 1 85 1.0E-24 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG60_14580 5762c59073057eb3eca996742e1bab39 378 Pfam PF13356 Arm DNA-binding domain 3 72 1.5E-11 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG60_11860 18c17314d92d55a4f870a8ab443bfe1e 210 Gene3D G3DSA:3.40.50.1820 1 208 2.8E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11860 18c17314d92d55a4f870a8ab443bfe1e 210 SUPERFAMILY SSF53474 3 207 5.69E-33 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_14480 beb90e13ad36363bb3012920c1711f0a 261 SUPERFAMILY SSF53639 27 237 3.34E-64 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDG60_14480 beb90e13ad36363bb3012920c1711f0a 261 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 210 1.3E-38 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal CDG60_14480 beb90e13ad36363bb3012920c1711f0a 261 SMART SM01007 32 210 4.7E-43 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal CDG60_14480 beb90e13ad36363bb3012920c1711f0a 261 Gene3D G3DSA:3.40.225.10 13 258 3.4E-56 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDG60_09370 7039b7e7e7e875eb1ad2fef8a4db521e 287 SUPERFAMILY SSF103481 44 136 6.21E-6 T 23-10-2018 CDG60_09370 7039b7e7e7e875eb1ad2fef8a4db521e 287 Pfam PF00892 EamA-like transporter family 149 280 3.6E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_09370 7039b7e7e7e875eb1ad2fef8a4db521e 287 Pfam PF00892 EamA-like transporter family 6 130 5.2E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_09370 7039b7e7e7e875eb1ad2fef8a4db521e 287 SUPERFAMILY SSF103481 183 282 5.89E-8 T 23-10-2018 CDG60_07830 805a7bb151604c93b7cd052367c2bb45 148 Gene3D G3DSA:1.10.1510.10 1 91 4.1E-26 T 23-10-2018 CDG60_07830 805a7bb151604c93b7cd052367c2bb45 148 Gene3D G3DSA:1.10.10.410 92 147 5.0E-17 T 23-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDG60_07830 805a7bb151604c93b7cd052367c2bb45 148 SUPERFAMILY SSF89095 3 147 1.26E-37 T 23-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CDG60_07830 805a7bb151604c93b7cd052367c2bb45 148 Pfam PF09424 Yqey-like protein 5 147 3.8E-50 T 23-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 CDG60_00935 d93a51d62b784e42156c78d631547e7f 264 Gene3D G3DSA:3.40.50.300 29 256 5.6E-62 T 23-10-2018 CDG60_00935 d93a51d62b784e42156c78d631547e7f 264 Pfam PF00005 ABC transporter 45 181 4.2E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_00935 d93a51d62b784e42156c78d631547e7f 264 SMART SM00382 54 231 2.5E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_00935 d93a51d62b784e42156c78d631547e7f 264 SUPERFAMILY SSF52540 30 238 2.24E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12295 5fce6ddb7e150cbd75303d4c99dc6b3a 442 Pfam PF05065 Phage capsid family 167 398 3.8E-21 T 23-10-2018 IPR024455 Phage capsid CDG60_12295 5fce6ddb7e150cbd75303d4c99dc6b3a 442 Gene3D G3DSA:3.30.2320.10 290 383 1.3E-5 T 23-10-2018 CDG60_12295 5fce6ddb7e150cbd75303d4c99dc6b3a 442 Gene3D G3DSA:3.30.2400.10 207 424 1.3E-5 T 23-10-2018 CDG60_12295 5fce6ddb7e150cbd75303d4c99dc6b3a 442 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 10 397 1.2E-21 T 23-10-2018 IPR024455 Phage capsid CDG60_12295 5fce6ddb7e150cbd75303d4c99dc6b3a 442 SUPERFAMILY SSF56563 166 436 6.28E-26 T 23-10-2018 CDG60_02670 f4daae2922f10818c13084d6d8529908 89 Gene3D G3DSA:1.10.287.10 2 89 1.7E-35 T 23-10-2018 CDG60_02670 f4daae2922f10818c13084d6d8529908 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-35 T 23-10-2018 CDG60_02670 f4daae2922f10818c13084d6d8529908 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_02670 f4daae2922f10818c13084d6d8529908 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.414 T 23-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02670 f4daae2922f10818c13084d6d8529908 89 Pfam PF00312 Ribosomal protein S15 9 88 6.9E-37 T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_02670 f4daae2922f10818c13084d6d8529908 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 4.3E-38 T 23-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02670 f4daae2922f10818c13084d6d8529908 89 SUPERFAMILY SSF47060 3 89 9.42E-35 T 23-10-2018 IPR009068 S15/NS1, RNA-binding CDG60_02670 f4daae2922f10818c13084d6d8529908 89 SMART SM01387 8 88 5.2E-52 T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_10305 2ae9176268a08245d13c84026797bb63 173 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 155 39.989 T 23-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CDG60_10305 2ae9176268a08245d13c84026797bb63 173 SUPERFAMILY SSF53927 6 159 2.51E-49 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG60_10305 2ae9176268a08245d13c84026797bb63 173 Gene3D G3DSA:3.40.140.10 1 173 5.6E-54 T 23-10-2018 CDG60_10305 2ae9176268a08245d13c84026797bb63 173 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 96 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CDG60_10305 2ae9176268a08245d13c84026797bb63 173 Pfam PF14437 MafB19-like deaminase 9 154 7.6E-31 T 23-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CDG60_10075 21e2e200ea97e6d5cc79ddc27444fd4c 128 SUPERFAMILY SSF82649 1 125 1.2E-48 T 23-10-2018 CDG60_10075 21e2e200ea97e6d5cc79ddc27444fd4c 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.0E-67 T 23-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CDG60_10075 21e2e200ea97e6d5cc79ddc27444fd4c 128 Pfam PF01592 NifU-like N terminal domain 2 127 1.4E-56 T 23-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CDG60_10075 21e2e200ea97e6d5cc79ddc27444fd4c 128 Gene3D G3DSA:3.90.1010.10 1 128 7.3E-58 T 23-10-2018 CDG60_11640 b70fabda6ac61526e26ec8ed701bac8e 230 Gene3D G3DSA:1.10.357.10 77 229 2.7E-28 T 23-10-2018 CDG60_11640 b70fabda6ac61526e26ec8ed701bac8e 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 41 86 6.5E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_11640 b70fabda6ac61526e26ec8ed701bac8e 230 SUPERFAMILY SSF46689 26 100 2.02E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_11640 b70fabda6ac61526e26ec8ed701bac8e 230 Gene3D G3DSA:1.10.10.60 25 76 9.4E-17 T 23-10-2018 CDG60_13690 b5ba5b6d1b0bfc02babe590d60e49f1d 197 Pfam PF01810 LysE type translocator 12 189 2.7E-14 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_17580 39a19d813be0cd1ba1175b837f54fedd 236 SUPERFAMILY SSF48498 112 215 8.9E-6 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_17580 39a19d813be0cd1ba1175b837f54fedd 236 SUPERFAMILY SSF46689 31 110 2.72E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17580 39a19d813be0cd1ba1175b837f54fedd 236 Gene3D G3DSA:1.10.357.10 87 225 4.2E-11 T 23-10-2018 CDG60_17580 39a19d813be0cd1ba1175b837f54fedd 236 Gene3D G3DSA:1.10.10.60 17 86 3.0E-11 T 23-10-2018 CDG60_17580 39a19d813be0cd1ba1175b837f54fedd 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 88 4.9E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_09615 4235eddee85b29967849cb28c01b5ef2 578 Gene3D G3DSA:3.40.50.1110 260 572 1.6E-28 T 23-10-2018 IPR036514 SGNH hydrolase superfamily CDG60_09615 4235eddee85b29967849cb28c01b5ef2 578 SUPERFAMILY SSF52266 413 577 1.04E-17 T 23-10-2018 CDG60_09615 4235eddee85b29967849cb28c01b5ef2 578 Gene3D G3DSA:2.60.120.1360 294 424 1.6E-28 T 23-10-2018 CDG60_09615 4235eddee85b29967849cb28c01b5ef2 578 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 423 564 8.6E-9 T 23-10-2018 IPR013830 SGNH hydrolase-type esterase domain CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 Gene3D G3DSA:3.30.460.10 2 155 2.1E-47 T 23-10-2018 CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 SUPERFAMILY SSF81891 157 383 1.03E-39 T 23-10-2018 CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 248 1.4E-12 T 23-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 Pfam PF12626 Polymerase A arginine-rich C-terminus 296 408 2.8E-27 T 23-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 Pfam PF01743 Poly A polymerase head domain 34 159 6.3E-31 T 23-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 6 410 9.3E-119 T 23-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 Gene3D G3DSA:1.10.3090.10 157 399 1.5E-68 T 23-10-2018 CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 440 33.722 T 23-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CDG60_15110 79c6c61deeb67f2e3714da9f38d427c6 484 SUPERFAMILY SSF81301 10 156 1.2E-35 T 23-10-2018 CDG60_05255 2629ca0341ad13740f50bdb196c2a83b 202 Pfam PF01569 PAP2 superfamily 82 195 5.1E-19 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG60_05255 2629ca0341ad13740f50bdb196c2a83b 202 SMART SM00014 75 189 3.4E-16 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG60_05255 2629ca0341ad13740f50bdb196c2a83b 202 Gene3D G3DSA:1.20.144.10 7 111 7.1E-9 T 23-10-2018 CDG60_05255 2629ca0341ad13740f50bdb196c2a83b 202 Gene3D G3DSA:1.20.144.10 112 202 8.2E-21 T 23-10-2018 CDG60_05255 2629ca0341ad13740f50bdb196c2a83b 202 SUPERFAMILY SSF48317 7 193 7.98E-34 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG60_17435 6369a955f1bf9869117324ac700f60a0 188 Gene3D G3DSA:3.40.50.360 1 188 4.7E-54 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_17435 6369a955f1bf9869117324ac700f60a0 188 SUPERFAMILY SSF52218 1 188 7.29E-47 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_17435 6369a955f1bf9869117324ac700f60a0 188 Pfam PF02525 Flavodoxin-like fold 1 187 1.7E-43 T 23-10-2018 IPR003680 Flavodoxin-like fold CDG60_17435 6369a955f1bf9869117324ac700f60a0 188 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 188 27.839 T 23-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CDG60_05110 b015867891c7abc22134444249001fb4 208 SUPERFAMILY SSF69593 32 159 4.97E-13 T 23-10-2018 CDG60_05110 b015867891c7abc22134444249001fb4 208 SMART SM00563 46 158 2.8E-16 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_05110 b015867891c7abc22134444249001fb4 208 Pfam PF01553 Acyltransferase 46 151 8.4E-8 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_06870 46d50e02fe1a15205d7d7dc9060b39a2 353 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 33 351 1.4E-84 T 23-10-2018 IPR003770 Endolytic murein transglycosylase CDG60_06870 46d50e02fe1a15205d7d7dc9060b39a2 353 Pfam PF02618 YceG-like family 60 343 4.2E-78 T 23-10-2018 IPR003770 Endolytic murein transglycosylase CDG60_06870 46d50e02fe1a15205d7d7dc9060b39a2 353 Gene3D G3DSA:3.30.160.60 318 353 6.0E-17 T 23-10-2018 CDG60_06870 46d50e02fe1a15205d7d7dc9060b39a2 353 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 32 351 32.169 T 23-10-2018 IPR003770 Endolytic murein transglycosylase CDG60_02620 9e9b1ec21a9fcbae88a758d3775b1304 539 SUPERFAMILY SSF56112 95 435 2.04E-22 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_02620 9e9b1ec21a9fcbae88a758d3775b1304 539 Pfam PF03109 ABC1 family 113 231 6.5E-33 T 23-10-2018 IPR004147 UbiB domain CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 PIRSF PIRSF000101 1 564 2.4E-268 T 23-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Gene3D G3DSA:3.30.465.10 103 266 7.4E-75 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Pfam PF09330 D-lactate dehydrogenase, membrane binding 275 563 4.7E-134 T 23-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Gene3D G3DSA:3.30.1370.20 431 510 7.4E-39 T 23-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Pfam PF01565 FAD binding domain 44 164 4.7E-8 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Gene3D G3DSA:3.30.43.10 511 562 1.7E-19 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Gene3D G3DSA:3.30.70.610 359 430 2.3E-16 T 23-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Gene3D G3DSA:3.30.70.610 267 343 2.8E-12 T 23-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Gene3D G3DSA:3.30.43.10 2 100 1.2E-12 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 7 564 56.462 T 23-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 SUPERFAMILY SSF55103 273 563 2.32E-103 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDG60_06290 6020af2e0ccf562e7f974204b6c54c14 564 SUPERFAMILY SSF56176 8 269 1.68E-66 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG60_13140 1ce4afea5d4af55443227e9409ca829a 195 SUPERFAMILY SSF46689 3 81 5.13E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_13140 1ce4afea5d4af55443227e9409ca829a 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 1.5E-14 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13140 1ce4afea5d4af55443227e9409ca829a 195 Gene3D G3DSA:1.10.357.10 1 190 1.6E-45 T 23-10-2018 CDG60_13140 1ce4afea5d4af55443227e9409ca829a 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13140 1ce4afea5d4af55443227e9409ca829a 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13140 1ce4afea5d4af55443227e9409ca829a 195 SUPERFAMILY SSF48498 77 185 7.23E-8 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_06375 9e39bcc78ce14ecb0e882294ee856f24 828 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 38 826 1.5E-174 T 23-10-2018 IPR010104 Bacterial TonB-dependent receptor CDG60_06375 9e39bcc78ce14ecb0e882294ee856f24 828 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 162 2.6E-13 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_06375 9e39bcc78ce14ecb0e882294ee856f24 828 SUPERFAMILY SSF56935 37 826 1.22E-91 T 23-10-2018 CDG60_06375 9e39bcc78ce14ecb0e882294ee856f24 828 Pfam PF00593 TonB dependent receptor 369 826 2.6E-37 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_06375 9e39bcc78ce14ecb0e882294ee856f24 828 Gene3D G3DSA:2.170.130.10 41 165 2.7E-12 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_06375 9e39bcc78ce14ecb0e882294ee856f24 828 Gene3D G3DSA:2.40.170.20 193 827 3.8E-52 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_02330 106d363475eae6e2c8fd6d96b2c18b9a 232 Pfam PF01323 DSBA-like thioredoxin domain 2 200 1.5E-43 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG60_02330 106d363475eae6e2c8fd6d96b2c18b9a 232 SUPERFAMILY SSF52833 1 209 5.52E-41 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_02330 106d363475eae6e2c8fd6d96b2c18b9a 232 Gene3D G3DSA:3.40.30.10 1 207 1.5E-69 T 23-10-2018 CDG60_05715 5341e0b22a547a7479ea1b803a88cac9 146 Pfam PF00582 Universal stress protein family 3 145 6.3E-33 T 23-10-2018 IPR006016 UspA CDG60_05715 5341e0b22a547a7479ea1b803a88cac9 146 PRINTS PR01438 Universal stress protein signature 123 145 7.8E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG60_05715 5341e0b22a547a7479ea1b803a88cac9 146 PRINTS PR01438 Universal stress protein signature 105 117 7.8E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG60_05715 5341e0b22a547a7479ea1b803a88cac9 146 PRINTS PR01438 Universal stress protein signature 3 21 7.8E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG60_05715 5341e0b22a547a7479ea1b803a88cac9 146 SUPERFAMILY SSF52402 3 145 5.44E-40 T 23-10-2018 CDG60_05715 5341e0b22a547a7479ea1b803a88cac9 146 PIRSF PIRSF006276 1 146 9.6E-24 T 23-10-2018 IPR006015 Universal stress protein A CDG60_05715 5341e0b22a547a7479ea1b803a88cac9 146 Gene3D G3DSA:3.40.50.620 1 146 1.4E-40 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.2E-34 T 23-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 PIRSF PIRSF002158 10 274 8.4E-103 T 23-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 5.5E-125 T 23-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 Gene3D G3DSA:4.10.950.10 197 273 3.8E-34 T 23-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 SUPERFAMILY SSF50104 126 269 9.03E-57 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 Gene3D G3DSA:2.40.50.140 1 114 1.6E-49 T 23-10-2018 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 45.45 T 23-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 4.1E-53 T 23-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 SUPERFAMILY SSF50249 3 124 1.41E-49 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 SMART SM01382 124 251 2.6E-84 T 23-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 SMART SM01383 42 118 2.7E-47 T 23-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15975 dfe1e83d2222a45c799803eab06bf94d 274 Gene3D G3DSA:2.30.30.30 118 196 3.0E-30 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG60_01805 668f8c59a1951571da4de42db57b917d 338 SMART SM00849 63 284 0.0039 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_01805 668f8c59a1951571da4de42db57b917d 338 SUPERFAMILY SSF56281 63 291 8.0E-26 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_01805 668f8c59a1951571da4de42db57b917d 338 Gene3D G3DSA:3.60.15.10 30 327 1.5E-35 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_01805 668f8c59a1951571da4de42db57b917d 338 Pfam PF12706 Beta-lactamase superfamily domain 101 285 6.7E-12 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_17255 edec38e88390efb97b2afe7b85cf587a 599 Gene3D G3DSA:3.40.50.1110 454 593 2.4E-5 T 23-10-2018 IPR036514 SGNH hydrolase superfamily CDG60_17255 edec38e88390efb97b2afe7b85cf587a 599 Pfam PF01757 Acyltransferase family 8 318 1.2E-29 T 23-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CDG60_17255 edec38e88390efb97b2afe7b85cf587a 599 SUPERFAMILY SSF52266 386 592 1.61E-5 T 23-10-2018 CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 30 683 48.572 T 23-10-2018 IPR022946 Uncharacterised protein family UPF0313 CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 Pfam PF04055 Radical SAM superfamily 417 620 2.7E-19 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 417 437 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 Pfam PF11842 Domain of unknown function (DUF3362) 631 782 2.6E-63 T 23-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 SMART SM00729 413 663 2.0E-7 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 SUPERFAMILY SSF102114 404 657 1.15E-10 T 23-10-2018 CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 30 681 1.4E-256 T 23-10-2018 IPR022946 Uncharacterised protein family UPF0313 CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 Gene3D G3DSA:3.80.30.20 413 676 2.4E-15 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG60_01785 93c44ed9b313bb87e6c49ebb6d15b34f 804 Pfam PF08497 Radical SAM N-terminal 30 416 3.8E-140 T 23-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CDG60_14160 c56d009fedc7f12bbbc9742d168fb65f 521 Pfam PF00171 Aldehyde dehydrogenase family 43 505 4.8E-123 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_14160 c56d009fedc7f12bbbc9742d168fb65f 521 Gene3D G3DSA:3.40.605.10 46 499 1.4E-135 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_14160 c56d009fedc7f12bbbc9742d168fb65f 521 SUPERFAMILY SSF53720 40 511 3.8E-123 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_14160 c56d009fedc7f12bbbc9742d168fb65f 521 Gene3D G3DSA:3.40.309.10 282 474 1.4E-135 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 Gene3D G3DSA:2.30.42.10 108 193 2.0E-66 T 23-10-2018 CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 Gene3D G3DSA:3.30.750.44 59 342 2.0E-66 T 23-10-2018 CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 SMART SM00245 170 367 1.0E-48 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 SUPERFAMILY SSF52096 39 371 6.63E-64 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 Pfam PF03572 Peptidase family S41 205 363 1.1E-43 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 371 1.5E-66 T 23-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 Gene3D G3DSA:3.90.226.10 194 363 2.0E-66 T 23-10-2018 CDG60_02005 f9326dc5feabb79f6177d59dbdf98668 389 SUPERFAMILY SSF50156 105 183 7.19E-5 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_11395 939b803b5e82a0af846ce6a052558d46 510 SUPERFAMILY SSF56954 101 491 2.09E-61 T 23-10-2018 CDG60_11395 939b803b5e82a0af846ce6a052558d46 510 Gene3D G3DSA:1.20.1600.10 105 505 9.0E-62 T 23-10-2018 CDG60_11395 939b803b5e82a0af846ce6a052558d46 510 Pfam PF02321 Outer membrane efflux protein 315 490 5.0E-19 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_11395 939b803b5e82a0af846ce6a052558d46 510 Pfam PF02321 Outer membrane efflux protein 107 285 3.6E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 174 187 1.1E-30 T 23-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 192 205 1.1E-30 T 23-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 257 263 1.1E-30 T 23-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 127 145 1.1E-30 T 23-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 66 79 1.1E-30 T 23-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 207 218 1.1E-30 T 23-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 111 125 1.1E-30 T 23-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 71 249 1.9E-25 T 23-10-2018 IPR000477 Reverse transcriptase domain CDG60_05200 4baf11d6152a3e416cd170bdfc73731b 340 SUPERFAMILY SSF56672 70 302 4.0E-12 T 23-10-2018 CDG60_16400 566a0033d5d98f7af39ebcd4f81fe592 301 Gene3D G3DSA:3.30.2350.10 3 246 3.6E-87 T 23-10-2018 CDG60_16400 566a0033d5d98f7af39ebcd4f81fe592 301 SUPERFAMILY SSF55120 12 243 1.97E-77 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_16400 566a0033d5d98f7af39ebcd4f81fe592 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 13 299 18.326 T 23-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_16400 566a0033d5d98f7af39ebcd4f81fe592 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 14 221 5.8E-73 T 23-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_16400 566a0033d5d98f7af39ebcd4f81fe592 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 247 299 1.9E-7 T 23-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_16400 566a0033d5d98f7af39ebcd4f81fe592 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 237 4.4E-9 T 23-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CDG60_16400 566a0033d5d98f7af39ebcd4f81fe592 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 35 183 1.1E-59 T 23-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CDG60_01425 fb40ba51b9f0366204b64db9dcb25fd8 163 SUPERFAMILY SSF46785 8 106 1.39E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01425 fb40ba51b9f0366204b64db9dcb25fd8 163 Pfam PF03551 Transcriptional regulator PadR-like family 24 93 9.5E-18 T 23-10-2018 IPR005149 Transcription regulator PadR, N-terminal CDG60_01425 fb40ba51b9f0366204b64db9dcb25fd8 163 Gene3D G3DSA:1.10.10.10 7 117 1.8E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12955 ded5db9e5e21554bec21419f7fc19c00 327 Gene3D G3DSA:1.10.10.10 6 92 4.1E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12955 ded5db9e5e21554bec21419f7fc19c00 327 Gene3D G3DSA:3.40.190.10 166 267 1.6E-51 T 23-10-2018 CDG60_12955 ded5db9e5e21554bec21419f7fc19c00 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.9E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12955 ded5db9e5e21554bec21419f7fc19c00 327 SUPERFAMILY SSF46785 6 90 5.1E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_12955 ded5db9e5e21554bec21419f7fc19c00 327 Pfam PF03466 LysR substrate binding domain 91 295 1.9E-28 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_12955 ded5db9e5e21554bec21419f7fc19c00 327 Gene3D G3DSA:3.40.190.10 95 291 1.6E-51 T 23-10-2018 CDG60_12955 ded5db9e5e21554bec21419f7fc19c00 327 SUPERFAMILY SSF53850 93 298 4.71E-34 T 23-10-2018 CDG60_12635 5ead726307f7ab2c759459b3f4f10c6c 455 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 451 2.2E-120 T 23-10-2018 IPR010263 Type VI secretion protein, VC_A0114 CDG60_12635 5ead726307f7ab2c759459b3f4f10c6c 455 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 453 3.8E-134 T 23-10-2018 IPR010263 Type VI secretion protein, VC_A0114 CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 329 2.4E-54 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.6E-28 T 23-10-2018 CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 PRINTS PR01713 Nucleotide sugar epimerase signature 221 236 1.6E-28 T 23-10-2018 CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 PRINTS PR01713 Nucleotide sugar epimerase signature 300 317 1.6E-28 T 23-10-2018 CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 PRINTS PR01713 Nucleotide sugar epimerase signature 261 276 1.6E-28 T 23-10-2018 CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 Gene3D G3DSA:3.90.25.10 185 333 1.2E-95 T 23-10-2018 CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 Gene3D G3DSA:3.40.50.720 4 321 1.2E-95 T 23-10-2018 CDG60_03765 ff06edfdd63ea59b49098776725ba4e4 340 SUPERFAMILY SSF51735 1 338 4.3E-87 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_05930 1d89b245afc3e649f9d13c24a871f2f7 128 Pfam PF02036 SCP-2 sterol transfer family 35 108 5.6E-7 T 23-10-2018 IPR003033 SCP2 sterol-binding domain CDG60_05930 1d89b245afc3e649f9d13c24a871f2f7 128 Gene3D G3DSA:3.30.1050.10 33 122 8.8E-12 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_05930 1d89b245afc3e649f9d13c24a871f2f7 128 SUPERFAMILY SSF55718 5 108 7.77E-11 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_06390 558b3632d080ab5dae991fdbbd171676 148 TIGRFAM TIGR02801 tolR: protein TolR 11 144 1.9E-38 T 23-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDG60_06390 558b3632d080ab5dae991fdbbd171676 148 Gene3D G3DSA:3.30.420.270 59 137 2.6E-9 T 23-10-2018 CDG60_06390 558b3632d080ab5dae991fdbbd171676 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 144 5.7E-28 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG60_06390 558b3632d080ab5dae991fdbbd171676 148 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 144 27.502 T 23-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDG60_03295 86a9e59f33521e293642956be3387a20 120 SUPERFAMILY SSF88697 2 118 3.23E-16 T 23-10-2018 IPR015947 PUA-like superfamily CDG60_03295 86a9e59f33521e293642956be3387a20 120 Pfam PF04266 ASCH domain 9 90 6.6E-8 T 23-10-2018 IPR007374 ASCH domain CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 SUPERFAMILY SSF54211 1 155 1.29E-42 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 Gene3D G3DSA:3.30.70.890 158 274 4.5E-19 T 23-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 Pfam PF08544 GHMP kinases C terminal 204 246 1.0E-5 T 23-10-2018 IPR013750 GHMP kinase, C-terminal domain CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 Gene3D G3DSA:3.30.230.10 1 155 2.7E-55 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 SUPERFAMILY SSF55060 156 262 2.83E-21 T 23-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 Pfam PF00288 GHMP kinases N terminal domain 83 140 3.8E-11 T 23-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 262 29.878 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 256 2.1E-72 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDG60_05440 3cfbc851069e4e756c1f4da230b3d6e1 275 PIRSF PIRSF010376 1 269 2.7E-75 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDG60_14335 9129f932e5bf4f405b44b7d74f85af2c 419 Gene3D G3DSA:3.40.50.300 31 202 9.4E-20 T 23-10-2018 CDG60_14335 9129f932e5bf4f405b44b7d74f85af2c 419 Pfam PF01926 50S ribosome-binding GTPase 39 150 3.7E-7 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_14335 9129f932e5bf4f405b44b7d74f85af2c 419 SUPERFAMILY SSF52540 24 225 1.1E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_03220 5e517ddacfbdc72b5829355f28179b17 311 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 9 311 41.596 T 23-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 CDG60_03220 5e517ddacfbdc72b5829355f28179b17 311 PIRSF PIRSF026649 10 311 1.6E-85 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_03220 5e517ddacfbdc72b5829355f28179b17 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 302 4.4E-67 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 91 9.4E-9 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 SMART SM00829 15 327 6.2E-58 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 328 2.2E-138 T 23-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 Gene3D G3DSA:3.40.50.720 125 266 6.0E-105 T 23-10-2018 CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 Pfam PF00107 Zinc-binding dehydrogenase 156 277 4.1E-23 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 SUPERFAMILY SSF51735 117 293 9.28E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 Gene3D G3DSA:3.90.180.10 18 327 6.0E-105 T 23-10-2018 CDG60_12815 c5e721868689481e929e2542ab2ac5f1 330 SUPERFAMILY SSF50129 6 154 5.78E-41 T 23-10-2018 IPR011032 GroES-like superfamily CDG60_14195 5b77920a316957be3f0a6d4dfa41c85b 64 SUPERFAMILY SSF55008 2 62 1.96E-12 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG60_14195 5b77920a316957be3f0a6d4dfa41c85b 64 Pfam PF00403 Heavy-metal-associated domain 3 51 7.0E-11 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG60_14195 5b77920a316957be3f0a6d4dfa41c85b 64 Gene3D G3DSA:3.30.70.100 1 61 6.9E-14 T 23-10-2018 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 Pfam PF12327 FtsZ family, C-terminal domain 227 322 1.5E-30 T 23-10-2018 IPR024757 Cell division protein FtsZ, C-terminal CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 15 372 36.244 T 23-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 SUPERFAMILY SSF52490 18 213 5.63E-69 T 23-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 SUPERFAMILY SSF55307 209 325 5.26E-37 T 23-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 SMART SM00864 19 210 2.9E-112 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 333 1.7E-126 T 23-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 SMART SM00865 212 331 2.1E-46 T 23-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 21 178 1.3E-43 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 ProSitePatterns PS01134 FtsZ protein signature 1. 50 84 - T 23-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 PRINTS PR00423 Cell division protein FtsZ signature 194 216 8.6E-46 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 PRINTS PR00423 Cell division protein FtsZ signature 132 153 8.6E-46 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 PRINTS PR00423 Cell division protein FtsZ signature 104 124 8.6E-46 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 PRINTS PR00423 Cell division protein FtsZ signature 217 238 8.6E-46 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 Gene3D G3DSA:3.40.50.1440 9 225 1.4E-80 T 23-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 Gene3D G3DSA:3.30.1330.20 226 338 7.5E-34 T 23-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 CDG60_17370 d62e272bf83ebd17a1d52a9e1dad7feb 395 ProSitePatterns PS01135 FtsZ protein signature 2. 103 124 - T 23-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 Gene3D G3DSA:1.10.166.10 1 70 6.3E-29 T 23-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.217 T 23-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 3.2E-24 T 23-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.1E-12 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 271 7.9E-146 T 23-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 Gene3D G3DSA:2.160.10.10 87 257 7.1E-55 T 23-10-2018 CDG60_06820 88abe8c1afbf2414d5b8c05e255b464c 273 SUPERFAMILY SSF51161 2 256 4.57E-72 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_08285 e42c7eb24ccb5d3808c2bf4b885b82ac 502 Gene3D G3DSA:3.50.50.60 311 500 1.0E-37 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08285 e42c7eb24ccb5d3808c2bf4b885b82ac 502 SUPERFAMILY SSF51905 273 485 3.5E-20 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08285 e42c7eb24ccb5d3808c2bf4b885b82ac 502 Gene3D G3DSA:3.50.50.60 3 176 4.1E-56 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08285 e42c7eb24ccb5d3808c2bf4b885b82ac 502 SUPERFAMILY SSF51905 11 479 1.65E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08285 e42c7eb24ccb5d3808c2bf4b885b82ac 502 Pfam PF00743 Flavin-binding monooxygenase-like 14 345 2.9E-23 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 Gene3D G3DSA:3.40.50.80 348 490 6.9E-33 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 SUPERFAMILY SSF52343 352 490 4.58E-27 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 SUPERFAMILY SSF63380 194 348 2.76E-15 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 Pfam PF00258 Flavodoxin 46 170 4.5E-26 T 23-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 PRINTS PR00369 Flavodoxin signature 45 58 1.1E-6 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 PRINTS PR00369 Flavodoxin signature 124 134 1.1E-6 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 PRINTS PR00369 Flavodoxin signature 93 104 1.1E-6 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 Gene3D G3DSA:3.40.50.360 42 183 3.9E-38 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_11475 6d3c524743fc4ce3dd535a2a375a26fd 490 SUPERFAMILY SSF52218 42 180 2.73E-37 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_04370 c26449bcab803d807f47a97533fc85cc 182 Gene3D G3DSA:3.90.79.10 36 181 3.0E-38 T 23-10-2018 CDG60_04370 c26449bcab803d807f47a97533fc85cc 182 Pfam PF00293 NUDIX domain 46 141 2.5E-9 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_04370 c26449bcab803d807f47a97533fc85cc 182 SUPERFAMILY SSF55811 2 162 3.79E-36 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_04370 c26449bcab803d807f47a97533fc85cc 182 Gene3D G3DSA:2.20.70.10 1 35 3.7E-13 T 23-10-2018 CDG60_04370 c26449bcab803d807f47a97533fc85cc 182 Pfam PF14803 Nudix N-terminal 2 34 1.6E-13 T 23-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 CDG60_06265 b193ec5e55b21329be317b910719f431 300 SUPERFAMILY SSF103481 185 286 4.05E-12 T 23-10-2018 CDG60_06265 b193ec5e55b21329be317b910719f431 300 Pfam PF00892 EamA-like transporter family 8 137 5.1E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_06265 b193ec5e55b21329be317b910719f431 300 Pfam PF00892 EamA-like transporter family 152 287 2.2E-19 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_06265 b193ec5e55b21329be317b910719f431 300 SUPERFAMILY SSF103481 39 142 2.35E-15 T 23-10-2018 CDG60_11895 033824b20a27003fc0c8f12c664f7d1a 146 Gene3D G3DSA:2.40.128.520 19 146 6.6E-17 T 23-10-2018 CDG60_11895 033824b20a27003fc0c8f12c664f7d1a 146 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 24 144 8.7E-24 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 SUPERFAMILY SSF55816 428 603 1.27E-40 T 23-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 PRINTS PR01607 Apyrase family signature 472 495 5.9E-30 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 PRINTS PR01607 Apyrase family signature 37 55 5.9E-30 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 PRINTS PR01607 Apyrase family signature 298 318 5.9E-30 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 PRINTS PR01607 Apyrase family signature 552 571 5.9E-30 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 PRINTS PR01607 Apyrase family signature 232 249 5.9E-30 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 PRINTS PR01607 Apyrase family signature 251 274 5.9E-30 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 SUPERFAMILY SSF56300 34 349 3.32E-68 T 23-10-2018 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 ProSitePatterns PS00785 5'-nucleotidase signature 1. 39 51 - T 23-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 Pfam PF00149 Calcineurin-like phosphoesterase 39 268 1.4E-8 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 Gene3D G3DSA:3.90.780.10 415 621 5.7E-50 T 23-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 Gene3D G3DSA:3.60.21.10 29 393 3.8E-101 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG60_00840 882d7a3bf5953275dd35b8229dfe917c 630 Pfam PF02872 5'-nucleotidase, C-terminal domain 433 578 3.4E-31 T 23-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG60_03310 098117626d582ab5d1f35ec9fb2f65f5 572 Pfam PF02254 TrkA-N domain 431 542 9.5E-17 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDG60_03310 098117626d582ab5d1f35ec9fb2f65f5 572 Gene3D G3DSA:3.40.50.720 424 567 8.7E-24 T 23-10-2018 CDG60_03310 098117626d582ab5d1f35ec9fb2f65f5 572 SUPERFAMILY SSF51735 429 560 1.6E-21 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03310 098117626d582ab5d1f35ec9fb2f65f5 572 Gene3D G3DSA:1.20.1530.20 5 401 1.2E-76 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_03310 098117626d582ab5d1f35ec9fb2f65f5 572 Pfam PF00999 Sodium/hydrogen exchanger family 14 390 4.8E-72 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 1.2E-30 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 8 75 4.2E-8 T 23-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 Gene3D G3DSA:1.10.10.10 77 160 1.2E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 7.1E-35 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 SUPERFAMILY SSF46767 77 158 1.09E-30 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 158 41.638 T 23-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 SUPERFAMILY SSF53155 5 83 8.24E-18 T 23-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG60_04455 861bc6b642a7f6d035684593dbd85d6c 160 Gene3D G3DSA:3.30.160.70 3 74 1.1E-17 T 23-10-2018 CDG60_08090 ea2e30ce52562f55ffbdf18b5219b417 134 Gene3D G3DSA:3.10.450.50 3 133 6.2E-46 T 23-10-2018 CDG60_08090 ea2e30ce52562f55ffbdf18b5219b417 134 SUPERFAMILY SSF54427 7 114 1.78E-21 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_08090 ea2e30ce52562f55ffbdf18b5219b417 134 Pfam PF12680 SnoaL-like domain 11 107 1.2E-9 T 23-10-2018 IPR037401 SnoaL-like domain CDG60_07165 8aa1fea4ecca1c68507d95b4fbd08c98 310 Pfam PF00756 Putative esterase 149 219 4.2E-7 T 23-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CDG60_07165 8aa1fea4ecca1c68507d95b4fbd08c98 310 SUPERFAMILY SSF53474 43 305 1.71E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_07165 8aa1fea4ecca1c68507d95b4fbd08c98 310 Gene3D G3DSA:3.40.50.1820 38 308 2.9E-61 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 399 1.9E-97 T 23-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 Pfam PF01494 FAD binding domain 7 354 9.5E-29 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 SUPERFAMILY SSF51905 7 394 3.56E-50 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 305 318 - T 23-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 Gene3D G3DSA:3.30.9.50 81 280 1.1E-87 T 23-10-2018 CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 Gene3D G3DSA:3.50.50.60 7 348 1.1E-87 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 1.3E-18 T 23-10-2018 CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 322 1.3E-18 T 23-10-2018 CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 1.3E-18 T 23-10-2018 CDG60_06005 88bd9bb1b2b32249a5858365768054bc 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.3E-18 T 23-10-2018 CDG60_17190 e2d02f05e1b962cc5bc6bcde143082d8 234 SUPERFAMILY SSF81324 124 215 1.1E-9 T 23-10-2018 CDG60_17190 e2d02f05e1b962cc5bc6bcde143082d8 234 Pfam PF07885 Ion channel 132 214 1.9E-6 T 23-10-2018 IPR013099 Potassium channel domain CDG60_17190 e2d02f05e1b962cc5bc6bcde143082d8 234 Gene3D G3DSA:1.10.287.70 121 217 6.3E-10 T 23-10-2018 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 Gene3D G3DSA:3.10.310.10 117 263 2.4E-106 T 23-10-2018 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 23-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.1E-93 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 SUPERFAMILY SSF54506 3 276 1.02E-55 T 23-10-2018 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 Pfam PF01678 Diaminopimelate epimerase 155 266 2.9E-27 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 Pfam PF01678 Diaminopimelate epimerase 5 125 1.2E-31 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.829 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG60_06465 aae035f09af504d184e4a89e93b2dca3 281 Gene3D G3DSA:3.10.310.10 4 272 2.4E-106 T 23-10-2018 CDG60_03600 56ca63fd4b42b7cf36d3e47a5ae2997a 142 Gene3D G3DSA:3.30.1330.40 14 142 2.1E-22 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_03600 56ca63fd4b42b7cf36d3e47a5ae2997a 142 SUPERFAMILY SSF55298 15 141 2.36E-22 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_03600 56ca63fd4b42b7cf36d3e47a5ae2997a 142 Pfam PF01042 Endoribonuclease L-PSP 28 140 3.3E-16 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG60_14925 0f0a319671ca3c02fc5a1df33c3842ab 58 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 2 53 7.3E-5 T 23-10-2018 IPR018756 Domain of unknown function DUF2314 CDG60_01390 8ddb3264ca65bef7e579bfe82f6812b8 278 SUPERFAMILY SSF52540 3 277 3.02E-53 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01390 8ddb3264ca65bef7e579bfe82f6812b8 278 Pfam PF13614 AAA domain 6 205 8.3E-40 T 23-10-2018 IPR025669 AAA domain CDG60_01390 8ddb3264ca65bef7e579bfe82f6812b8 278 Gene3D G3DSA:3.40.50.300 2 278 1.1E-62 T 23-10-2018 CDG60_01650 9729f12a66d2284e2ffe6741426f8606 409 Pfam PF07690 Major Facilitator Superfamily 31 342 4.7E-35 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_01650 9729f12a66d2284e2ffe6741426f8606 409 Gene3D G3DSA:1.20.1250.20 19 396 1.0E-43 T 23-10-2018 CDG60_01650 9729f12a66d2284e2ffe6741426f8606 409 SUPERFAMILY SSF103473 14 398 2.35E-56 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_01920 15f1457f707d7213b46b8fdd7a3bffa2 257 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 12 257 2.0E-47 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG60_01920 15f1457f707d7213b46b8fdd7a3bffa2 257 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 33 257 1.4E-35 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG60_06955 ad375985b96fc74f4dbf3d208dc180f4 241 SUPERFAMILY SSF63892 3 239 9.29E-98 T 23-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG60_06955 ad375985b96fc74f4dbf3d208dc180f4 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 127.31 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG60_06955 ad375985b96fc74f4dbf3d208dc180f4 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 238 1.8E-95 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG60_06955 ad375985b96fc74f4dbf3d208dc180f4 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 237 1.4E-101 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG60_06955 ad375985b96fc74f4dbf3d208dc180f4 241 Gene3D G3DSA:3.20.20.70 1 241 3.6E-104 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_08970 20531244ee4bfcba06a88964be377af6 370 Gene3D G3DSA:3.90.1150.10 14 359 7.0E-109 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_08970 20531244ee4bfcba06a88964be377af6 370 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 12 367 1.9E-146 T 23-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CDG60_08970 20531244ee4bfcba06a88964be377af6 370 Pfam PF00266 Aminotransferase class-V 38 314 3.4E-28 T 23-10-2018 IPR000192 Aminotransferase class V domain CDG60_08970 20531244ee4bfcba06a88964be377af6 370 Gene3D G3DSA:3.40.640.10 22 267 7.0E-109 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_08970 20531244ee4bfcba06a88964be377af6 370 PIRSF PIRSF000524 4 369 6.5E-58 T 23-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 CDG60_08970 20531244ee4bfcba06a88964be377af6 370 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 9 367 5.8E-172 T 23-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CDG60_08970 20531244ee4bfcba06a88964be377af6 370 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 370 185.268 T 23-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CDG60_08970 20531244ee4bfcba06a88964be377af6 370 SUPERFAMILY SSF53383 10 367 4.74E-85 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_00795 b0a4bd7048a29c3d2f58c36424b6f479 111 SUPERFAMILY SSF89360 6 100 2.94E-29 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG60_00795 b0a4bd7048a29c3d2f58c36424b6f479 111 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 23-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CDG60_00795 b0a4bd7048a29c3d2f58c36424b6f479 111 Gene3D G3DSA:2.60.300.12 5 111 2.5E-33 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG60_00795 b0a4bd7048a29c3d2f58c36424b6f479 111 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 110 1.1E-37 T 23-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CDG60_00795 b0a4bd7048a29c3d2f58c36424b6f479 111 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 111 32.72 T 23-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CDG60_00795 b0a4bd7048a29c3d2f58c36424b6f479 111 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 2.3E-18 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDG60_05160 82072dda6865c5c0d61f2dcdb5f38fc9 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_05160 82072dda6865c5c0d61f2dcdb5f38fc9 247 Pfam PF00005 ABC transporter 24 171 5.3E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_05160 82072dda6865c5c0d61f2dcdb5f38fc9 247 SMART SM00382 32 219 6.2E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_05160 82072dda6865c5c0d61f2dcdb5f38fc9 247 Gene3D G3DSA:3.40.50.300 5 247 2.5E-73 T 23-10-2018 CDG60_05160 82072dda6865c5c0d61f2dcdb5f38fc9 247 PIRSF PIRSF039085 4 247 5.0E-101 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CDG60_05160 82072dda6865c5c0d61f2dcdb5f38fc9 247 SUPERFAMILY SSF52540 7 241 5.56E-75 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 311 7.0E-18 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 SMART SM00876 220 312 4.9E-41 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 SMART SM00729 43 250 6.4E-40 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 TIGRFAM TIGR00433 bioB: biotin synthase 14 311 9.3E-122 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 Gene3D G3DSA:3.20.20.70 4 315 1.7E-128 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 Hamap MF_01694 Biotin synthase [bioB]. 5 313 42.173 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 SUPERFAMILY SSF102114 5 311 3.66E-89 T 23-10-2018 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 Pfam PF04055 Radical SAM superfamily 50 205 8.4E-14 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_10670 47aba312b8911e8b264dede5cb6bd035 329 PIRSF PIRSF001619 1 318 1.5E-137 T 23-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG60_15645 d0f75b4ec9de01ce104c452be52f04aa 391 SUPERFAMILY SSF51735 141 342 6.64E-26 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_15645 d0f75b4ec9de01ce104c452be52f04aa 391 Pfam PF00107 Zinc-binding dehydrogenase 175 340 2.1E-10 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG60_15645 d0f75b4ec9de01ce104c452be52f04aa 391 SUPERFAMILY SSF50129 10 174 7.81E-26 T 23-10-2018 IPR011032 GroES-like superfamily CDG60_15645 d0f75b4ec9de01ce104c452be52f04aa 391 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 102 8.5E-11 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG60_03930 ed609e16752cc9dd0f2cf1c12b03afe3 125 Gene3D G3DSA:3.90.1150.30 2 125 2.2E-35 T 23-10-2018 IPR038056 YjbR-like superfamily CDG60_03930 ed609e16752cc9dd0f2cf1c12b03afe3 125 Pfam PF04237 YjbR 20 106 6.7E-19 T 23-10-2018 IPR007351 Uncharacterised protein YjbR CDG60_03930 ed609e16752cc9dd0f2cf1c12b03afe3 125 SUPERFAMILY SSF142906 12 120 1.2E-31 T 23-10-2018 IPR038056 YjbR-like superfamily CDG60_05185 1e06e2ab844ff36a77d19d83020336ea 49 Pfam PF04480 Protein of unknown function (DUF559) 2 47 7.0E-14 T 23-10-2018 IPR007569 Protein of unknown function DUF559 CDG60_05185 1e06e2ab844ff36a77d19d83020336ea 49 Gene3D G3DSA:3.40.960.10 3 49 3.3E-11 T 23-10-2018 CDG60_00650 a9ace4254e3bab24d719bef3ce2341a9 188 Pfam PF00239 Resolvase, N terminal domain 6 139 1.6E-38 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG60_00650 a9ace4254e3bab24d719bef3ce2341a9 188 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG60_00650 a9ace4254e3bab24d719bef3ce2341a9 188 SMART SM00857 5 139 3.5E-49 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG60_00650 a9ace4254e3bab24d719bef3ce2341a9 188 Gene3D G3DSA:3.40.50.1390 5 128 2.0E-41 T 23-10-2018 CDG60_00650 a9ace4254e3bab24d719bef3ce2341a9 188 SUPERFAMILY SSF53041 5 139 1.83E-41 T 23-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 Gene3D G3DSA:2.40.420.20 309 378 6.4E-104 T 23-10-2018 CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 Gene3D G3DSA:2.40.50.100 70 214 6.4E-104 T 23-10-2018 CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 Pfam PF00529 HlyD membrane-fusion protein of T1SS 299 365 1.8E-7 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 380 3.8E-80 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 Gene3D G3DSA:1.10.287.470 105 178 6.4E-104 T 23-10-2018 CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 298 1.8E-15 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 SUPERFAMILY SSF111369 59 305 2.22E-79 T 23-10-2018 CDG60_05250 86a5272e2cc5b1b8de649f1f189b4bc9 419 Gene3D G3DSA:2.40.30.170 57 308 6.4E-104 T 23-10-2018 CDG60_06395 36cff6b6d39aadc3ef61d7a2ad6480f8 202 Gene3D G3DSA:3.30.1150.10 102 201 2.5E-16 T 23-10-2018 CDG60_06395 36cff6b6d39aadc3ef61d7a2ad6480f8 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 8 18 3.8E-6 T 23-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CDG60_06395 36cff6b6d39aadc3ef61d7a2ad6480f8 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 3.8E-6 T 23-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CDG60_06395 36cff6b6d39aadc3ef61d7a2ad6480f8 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 3.8E-6 T 23-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CDG60_06395 36cff6b6d39aadc3ef61d7a2ad6480f8 202 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 123 199 4.3E-12 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG60_06395 36cff6b6d39aadc3ef61d7a2ad6480f8 202 SUPERFAMILY SSF74653 115 192 1.14E-14 T 23-10-2018 CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 Pfam PF01011 PQQ enzyme repeat 732 766 7.3E-7 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 SMART SM00564 288 320 42.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 SMART SM00564 724 757 1.9E-6 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 SMART SM00564 346 386 48.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 SMART SM00564 222 254 0.76 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 SMART SM00564 415 464 41.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 Gene3D G3DSA:2.140.10.10 166 555 2.0E-109 T 23-10-2018 CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 23 802 6.1E-275 T 23-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 Pfam PF13360 PQQ-like domain 238 465 1.1E-8 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 Gene3D G3DSA:2.140.10.10 558 803 1.0E-37 T 23-10-2018 CDG60_12015 076c75f5c3531b45bdf0c9d04b587ca0 805 SUPERFAMILY SSF50998 170 789 1.26E-133 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG60_16755 3a536becdb4224f1749c7c53dd3172b1 239 Gene3D G3DSA:3.30.70.60 118 229 5.6E-35 T 23-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDG60_16755 3a536becdb4224f1749c7c53dd3172b1 239 PIRSF PIRSF016482 20 235 2.1E-58 T 23-10-2018 IPR007445 Pilus assembly protein, PilO CDG60_16755 3a536becdb4224f1749c7c53dd3172b1 239 Pfam PF04350 Pilus assembly protein, PilO 74 220 1.5E-50 T 23-10-2018 IPR007445 Pilus assembly protein, PilO CDG60_08095 0321130a4a4a42649be7a70760c77e66 359 Pfam PF12146 Serine aminopeptidase, S33 104 321 2.1E-8 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG60_08095 0321130a4a4a42649be7a70760c77e66 359 SUPERFAMILY SSF53474 79 357 2.01E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_08095 0321130a4a4a42649be7a70760c77e66 359 Gene3D G3DSA:3.40.50.1820 67 358 8.5E-20 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_08095 0321130a4a4a42649be7a70760c77e66 359 PIRSF PIRSF005211 2 359 2.5E-56 T 23-10-2018 IPR012020 AB hydrolase 4 family CDG60_10275 18805144ad20f02dbcbcde497c953f42 430 Pfam PF05525 Branched-chain amino acid transport protein 7 428 3.4E-146 T 23-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CDG60_10275 18805144ad20f02dbcbcde497c953f42 430 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 1.1E-142 T 23-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CDG60_03280 7228ed90307f812ff84a8aa8ea1758f6 377 PIRSF PIRSF006078 3 377 8.0E-134 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CDG60_03280 7228ed90307f812ff84a8aa8ea1758f6 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 5 376 7.3E-154 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CDG60_03280 7228ed90307f812ff84a8aa8ea1758f6 377 Gene3D G3DSA:3.40.50.10350 6 365 4.3E-138 T 23-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold CDG60_03280 7228ed90307f812ff84a8aa8ea1758f6 377 SUPERFAMILY SSF110738 5 376 4.18E-135 T 23-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 CDG60_03280 7228ed90307f812ff84a8aa8ea1758f6 377 Gene3D G3DSA:3.90.1510.10 44 279 4.3E-138 T 23-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 CDG60_03280 7228ed90307f812ff84a8aa8ea1758f6 377 Pfam PF02595 Glycerate kinase family 5 376 7.9E-146 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 Gene3D G3DSA:2.40.230.10 114 375 1.5E-89 T 23-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 Pfam PF02253 Phospholipase A1 109 371 4.7E-107 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 322 339 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 225 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 183 199 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 250 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 251 269 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 344 364 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 161 178 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 PRINTS PR01486 Bacterial phospholipase A1 protein signature 286 304 1.8E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_08390 1313c414929c1a6cf6688cab99bd3b16 375 SUPERFAMILY SSF56931 110 375 8.37E-92 T 23-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG60_11645 fdbd5d139444d1475d6307887af7fc0b 273 Pfam PF12697 Alpha/beta hydrolase family 42 262 1.6E-10 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_11645 fdbd5d139444d1475d6307887af7fc0b 273 SUPERFAMILY SSF53474 10 269 4.72E-25 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_11645 fdbd5d139444d1475d6307887af7fc0b 273 Gene3D G3DSA:3.40.50.1820 3 273 5.6E-45 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Pfam PF04546 Sigma-70, non-essential region 141 363 2.3E-52 T 23-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Gene3D G3DSA:1.10.10.10 543 628 2.9E-36 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 3.1E-27 T 23-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Pfam PF04539 Sigma-70 region 3 473 549 4.4E-31 T 23-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 SUPERFAMILY SSF88659 467 540 1.4E-20 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 SUPERFAMILY SSF88659 524 626 4.3E-27 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 390 615 4.5E-38 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 587 613 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Gene3D G3DSA:1.10.220.120 5 66 8.0E-26 T 23-10-2018 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 390 626 2.9E-122 T 23-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Gene3D G3DSA:1.10.601.10 115 463 4.3E-129 T 23-10-2018 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Pfam PF00140 Sigma-70 factor, region 1.2 100 130 2.2E-12 T 23-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Gene3D G3DSA:1.10.10.10 467 542 1.1E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Pfam PF04542 Sigma-70 region 2 394 463 1.8E-21 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 418 431 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Pfam PF04545 Sigma-70, region 4 562 615 5.4E-18 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 627 43.818 T 23-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 SUPERFAMILY SSF88946 117 461 3.4E-94 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 PRINTS PR00046 Major sigma-70 factor signature 566 578 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 PRINTS PR00046 Major sigma-70 factor signature 587 602 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 PRINTS PR00046 Major sigma-70 factor signature 418 431 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 PRINTS PR00046 Major sigma-70 factor signature 442 450 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_05345 9bf53ab5c963bfb4748a97fb437f7152 629 PRINTS PR00046 Major sigma-70 factor signature 602 613 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG60_06825 814da352eb691bdda3f1d45eb0faebdc 247 Gene3D G3DSA:2.40.160.170 22 247 3.7E-74 T 23-10-2018 CDG60_06825 814da352eb691bdda3f1d45eb0faebdc 247 SUPERFAMILY SSF56925 41 202 8.37E-7 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_07170 dca4d1f0bacac97c6486a4b482a7293a 439 Gene3D G3DSA:3.40.710.10 14 326 1.5E-81 T 23-10-2018 CDG60_07170 dca4d1f0bacac97c6486a4b482a7293a 439 SUPERFAMILY SSF56601 5 323 1.07E-81 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_07170 dca4d1f0bacac97c6486a4b482a7293a 439 Pfam PF00144 Beta-lactamase 10 314 1.5E-58 T 23-10-2018 IPR001466 Beta-lactamase-related CDG60_10360 6fdba4cc386eb77889b5927da90e45c3 327 Pfam PF13177 DNA polymerase III, delta subunit 27 173 6.3E-35 T 23-10-2018 CDG60_10360 6fdba4cc386eb77889b5927da90e45c3 327 Gene3D G3DSA:3.40.50.300 7 172 9.9E-43 T 23-10-2018 CDG60_10360 6fdba4cc386eb77889b5927da90e45c3 327 SUPERFAMILY SSF52540 10 214 2.96E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12125 fa1347a48bca2e7af8216d9b49cee47f 410 PIRSF PIRSF029171 1 410 6.1E-76 T 23-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CDG60_12125 fa1347a48bca2e7af8216d9b49cee47f 410 SUPERFAMILY SSF53474 73 408 1.61E-25 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_12125 fa1347a48bca2e7af8216d9b49cee47f 410 Pfam PF03583 Secretory lipase 125 225 6.9E-9 T 23-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CDG60_12125 fa1347a48bca2e7af8216d9b49cee47f 410 Gene3D G3DSA:3.40.50.1820 44 256 3.1E-52 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04175 efb668189372ffbc8cdf96638b517b32 217 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 196 1.2E-5 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG60_04175 efb668189372ffbc8cdf96638b517b32 217 SUPERFAMILY SSF52833 11 108 1.92E-14 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_04175 efb668189372ffbc8cdf96638b517b32 217 Gene3D G3DSA:1.20.1050.10 87 195 3.5E-58 T 23-10-2018 CDG60_04175 efb668189372ffbc8cdf96638b517b32 217 SUPERFAMILY SSF47616 90 207 1.42E-18 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG60_04175 efb668189372ffbc8cdf96638b517b32 217 Gene3D G3DSA:3.40.30.10 11 203 3.5E-58 T 23-10-2018 CDG60_04175 efb668189372ffbc8cdf96638b517b32 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 78 7.9E-11 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_06035 06e9eefe03d53196a5c668d60e65bd23 257 SUPERFAMILY SSF55811 65 237 5.37E-46 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_06035 06e9eefe03d53196a5c668d60e65bd23 257 ProSitePatterns PS00893 Nudix box signature. 154 175 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG60_06035 06e9eefe03d53196a5c668d60e65bd23 257 Pfam PF00293 NUDIX domain 123 229 1.7E-19 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_06035 06e9eefe03d53196a5c668d60e65bd23 257 Gene3D G3DSA:3.90.79.10 120 248 2.4E-39 T 23-10-2018 CDG60_06035 06e9eefe03d53196a5c668d60e65bd23 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 87 118 3.2E-12 T 23-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CDG60_06035 06e9eefe03d53196a5c668d60e65bd23 257 Gene3D G3DSA:3.90.79.20 3 119 4.8E-22 T 23-10-2018 CDG60_04570 577e6b529aad9ed6f7fdd015dc0bac8c 243 Gene3D G3DSA:2.30.210.20 1 59 1.7E-20 T 23-10-2018 CDG60_04570 577e6b529aad9ed6f7fdd015dc0bac8c 243 Gene3D G3DSA:3.40.630.70 60 237 7.1E-59 T 23-10-2018 CDG60_04570 577e6b529aad9ed6f7fdd015dc0bac8c 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 79.002 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDG60_04570 577e6b529aad9ed6f7fdd015dc0bac8c 243 SUPERFAMILY SSF55729 4 225 1.22E-80 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_04570 577e6b529aad9ed6f7fdd015dc0bac8c 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 215 4.2E-54 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDG60_04570 577e6b529aad9ed6f7fdd015dc0bac8c 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 202 1.8E-63 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDG60_10235 2bc2f3bcd08cf77690e02a4147a4b037 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 24.796 T 23-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CDG60_10235 2bc2f3bcd08cf77690e02a4147a4b037 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 3.9E-63 T 23-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CDG60_10235 2bc2f3bcd08cf77690e02a4147a4b037 184 Pfam PF01765 Ribosome recycling factor 21 182 4.5E-57 T 23-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CDG60_10235 2bc2f3bcd08cf77690e02a4147a4b037 184 Gene3D G3DSA:1.10.132.20 12 181 3.0E-60 T 23-10-2018 CDG60_10235 2bc2f3bcd08cf77690e02a4147a4b037 184 Gene3D G3DSA:3.30.1360.40 31 104 3.0E-60 T 23-10-2018 CDG60_10235 2bc2f3bcd08cf77690e02a4147a4b037 184 SUPERFAMILY SSF55194 1 184 6.67E-65 T 23-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 CDG60_01540 323ba1e26aff686cee2fefa38ebb3b7f 165 Gene3D G3DSA:3.30.1490.190 106 165 3.0E-13 T 23-10-2018 CDG60_01540 323ba1e26aff686cee2fefa38ebb3b7f 165 Pfam PF01475 Ferric uptake regulator family 35 153 1.0E-11 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDG60_01540 323ba1e26aff686cee2fefa38ebb3b7f 165 SUPERFAMILY SSF46785 27 159 1.66E-27 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01540 323ba1e26aff686cee2fefa38ebb3b7f 165 Gene3D G3DSA:1.10.10.10 16 105 1.1E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_01520 9958be6ca38f6968f518bc50e270e9bf 206 Pfam PF01810 LysE type translocator 16 200 5.0E-35 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_01520 9958be6ca38f6968f518bc50e270e9bf 206 PIRSF PIRSF006324 1 206 3.7E-51 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_08960 37922968d1ea191148e2e9ce5427d5b9 570 SUPERFAMILY SSF161098 309 549 7.06E-38 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_08960 37922968d1ea191148e2e9ce5427d5b9 570 SUPERFAMILY SSF161098 26 278 6.45E-47 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_08960 37922968d1ea191148e2e9ce5427d5b9 570 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 26 567 7.0E-201 T 23-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative CDG60_08960 37922968d1ea191148e2e9ce5427d5b9 570 Gene3D G3DSA:1.10.3720.10 21 285 2.0E-51 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_08960 37922968d1ea191148e2e9ce5427d5b9 570 Gene3D G3DSA:1.10.3720.10 300 562 1.1E-34 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_08960 37922968d1ea191148e2e9ce5427d5b9 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 282 2.8E-12 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_08960 37922968d1ea191148e2e9ce5427d5b9 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 374 558 8.0E-13 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_06320 1d4396c3e0b0c63f4ccfbdd570a76ee2 141 Pfam PF04304 Protein of unknown function (DUF454) 28 138 5.9E-28 T 23-10-2018 IPR007401 Protein of unknown function DUF454 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 ProSitePatterns PS00543 HlyD family secretion proteins signature. 361 383 - T 23-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 SUPERFAMILY SSF111369 71 165 3.53E-8 T 23-10-2018 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 Pfam PF13437 HlyD family secretion protein 246 354 1.1E-17 T 23-10-2018 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 Pfam PF13533 Biotin-lipoyl like 69 101 2.1E-8 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 1.6E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 376 396 1.6E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 258 279 1.6E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 291 315 1.6E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 1.6E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 338 1.6E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 376 1.6E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_11385 21db9ec5359158bf67421e2e6f656dad 396 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 187 396 7.5E-63 T 23-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CDG60_17610 6348c7fc0e074d3037533e6c7001d78b 176 SUPERFAMILY SSF48403 49 158 1.55E-21 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG60_17610 6348c7fc0e074d3037533e6c7001d78b 176 Pfam PF12796 Ankyrin repeats (3 copies) 51 131 1.5E-9 T 23-10-2018 IPR020683 Ankyrin repeat-containing domain CDG60_17610 6348c7fc0e074d3037533e6c7001d78b 176 Gene3D G3DSA:1.25.40.20 32 175 1.1E-21 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG60_17610 6348c7fc0e074d3037533e6c7001d78b 176 SMART SM00248 110 139 4100.0 T 23-10-2018 IPR002110 Ankyrin repeat GO:0005515 CDG60_17610 6348c7fc0e074d3037533e6c7001d78b 176 SMART SM00248 77 106 0.065 T 23-10-2018 IPR002110 Ankyrin repeat GO:0005515 CDG60_17610 6348c7fc0e074d3037533e6c7001d78b 176 SMART SM00248 44 73 69.0 T 23-10-2018 IPR002110 Ankyrin repeat GO:0005515 CDG60_02560 665fe058422388567e66eeba6ba4da56 91 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 84 1.0E-16 T 23-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CDG60_02560 665fe058422388567e66eeba6ba4da56 91 PIRSF PIRSF028784 1 91 2.8E-26 T 23-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CDG60_15520 5e52392aab1637e0a558ffa53b4c65f1 292 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 205 282 3.8E-11 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG60_15520 5e52392aab1637e0a558ffa53b4c65f1 292 SUPERFAMILY SSF74653 187 285 4.12E-15 T 23-10-2018 CDG60_15520 5e52392aab1637e0a558ffa53b4c65f1 292 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 207 284 2.7E-12 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG60_01165 0ccc9280b467b6cb3e9666c8b08d3228 298 SMART SM00382 69 217 5.8E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_01165 0ccc9280b467b6cb3e9666c8b08d3228 298 Gene3D G3DSA:3.40.50.300 16 235 7.5E-24 T 23-10-2018 CDG60_01165 0ccc9280b467b6cb3e9666c8b08d3228 298 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 74 212 4.8E-18 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_01165 0ccc9280b467b6cb3e9666c8b08d3228 298 SUPERFAMILY SSF52540 58 292 8.89E-21 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Gene3D G3DSA:2.70.150.20 292 408 3.5E-39 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00943 Copper-transporting ATPase signature 222 241 2.3E-13 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00943 Copper-transporting ATPase signature 427 441 2.3E-13 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00943 Copper-transporting ATPase signature 682 699 2.3E-13 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00943 Copper-transporting ATPase signature 122 142 2.3E-13 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00943 Copper-transporting ATPase signature 274 293 2.3E-13 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00943 Copper-transporting ATPase signature 294 312 2.3E-13 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 SUPERFAMILY SSF81653 307 404 7.32E-28 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 508 514 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 237 814 5.5E-191 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Pfam PF00122 E1-E2 ATPase 305 485 1.7E-54 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 662 3.9E-29 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 3.9E-29 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 520 3.9E-29 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 728 740 3.9E-29 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 724 3.9E-29 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 641 3.9E-29 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Gene3D G3DSA:3.40.50.1000 487 757 4.5E-92 T 23-10-2018 IPR023214 HAD superfamily CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Gene3D G3DSA:3.30.70.100 1 78 2.5E-20 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 14 75 3.4E-11 T 23-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 80 142 1.2E-13 T 23-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Gene3D G3DSA:3.30.70.100 79 145 3.5E-23 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Pfam PF00403 Heavy-metal-associated domain 15 73 3.1E-17 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Pfam PF00403 Heavy-metal-associated domain 82 141 6.5E-18 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 SUPERFAMILY SSF55008 80 144 2.88E-21 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 719 5.4E-44 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 SUPERFAMILY SSF55008 11 76 8.64E-18 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 ProSitePatterns PS01047 Heavy-metal-associated domain. 84 113 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 783 3.1E-94 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 219 815 1.7E-182 T 23-10-2018 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 SUPERFAMILY SSF81665 271 793 4.32E-14 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDG60_14205 66ae59fa28d44234afbd488c86290818 825 SUPERFAMILY SSF56784 504 812 1.26E-58 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_14205 66ae59fa28d44234afbd488c86290818 825 Gene3D G3DSA:3.40.1110.10 517 637 4.5E-92 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDG60_18000 66477b7099a94e48e240b79843e1336b 115 PIRSF PIRSF021239 1 115 4.7E-47 T 23-10-2018 IPR007437 Protein of unknown function DUF486 CDG60_18000 66477b7099a94e48e240b79843e1336b 115 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 112 1.1E-40 T 23-10-2018 IPR007437 Protein of unknown function DUF486 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 Gene3D G3DSA:3.40.50.620 1 309 9.8E-136 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 Gene3D G3DSA:1.20.120.640 311 472 2.1E-41 T 23-10-2018 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 471 4.6E-174 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 SUPERFAMILY SSF52374 6 318 2.53E-97 T 23-10-2018 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 Pfam PF09190 DALR domain 349 411 1.2E-17 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 318 5.6E-132 T 23-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 SMART SM00840 349 411 2.3E-18 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 9.8E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 9.8E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 9.8E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 9.8E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 472 38.426 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDG60_11435 17594a7ed5e20033acab0cfad7770f56 473 SUPERFAMILY SSF47323 322 471 4.45E-34 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 SUPERFAMILY SSF63380 96 203 5.95E-25 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 PIRSF PIRSF000498 1 209 1.2E-51 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 Gene3D G3DSA:2.40.30.20 100 190 4.6E-23 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 205 2.0E-49 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 Gene3D G3DSA:2.40.30.20 1 91 1.0E-22 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 SUPERFAMILY SSF63380 1 95 4.34E-20 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 Pfam PF00677 Lumazine binding domain 103 188 1.3E-17 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_07845 d3cce87e32a605ac1205c01d2cbaa9b3 209 Pfam PF00677 Lumazine binding domain 3 88 1.8E-15 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_14430 608057e9c863ea7095a5356b0f8c49d4 295 SUPERFAMILY SSF52096 12 235 6.45E-40 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_14430 608057e9c863ea7095a5356b0f8c49d4 295 Gene3D G3DSA:3.90.226.10 3 224 3.3E-45 T 23-10-2018 CDG60_14430 608057e9c863ea7095a5356b0f8c49d4 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 177 188 1.9E-5 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14430 608057e9c863ea7095a5356b0f8c49d4 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 75 89 1.9E-5 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14430 608057e9c863ea7095a5356b0f8c49d4 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 110 128 1.9E-5 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG60_14430 608057e9c863ea7095a5356b0f8c49d4 295 Pfam PF01039 Carboxyl transferase domain 13 196 3.8E-21 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDG60_14430 608057e9c863ea7095a5356b0f8c49d4 295 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 8 273 5.9E-113 T 23-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 CDG60_12525 f0c26f5f92cb89e11adcc05cd8bdfacf 139 Pfam PF00583 Acetyltransferase (GNAT) family 24 127 5.1E-12 T 23-10-2018 IPR000182 GNAT domain CDG60_12525 f0c26f5f92cb89e11adcc05cd8bdfacf 139 SUPERFAMILY SSF55729 5 131 3.55E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_12525 f0c26f5f92cb89e11adcc05cd8bdfacf 139 Gene3D G3DSA:3.40.630.30 2 138 4.6E-32 T 23-10-2018 CDG60_16300 039dadf4f04efc7c26ccb15ac292f5a2 214 SUPERFAMILY SSF52540 1 188 1.24E-33 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16300 039dadf4f04efc7c26ccb15ac292f5a2 214 Gene3D G3DSA:3.40.50.300 1 207 2.2E-41 T 23-10-2018 CDG60_16300 039dadf4f04efc7c26ccb15ac292f5a2 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 181 8.0E-18 T 23-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDG60_16300 039dadf4f04efc7c26ccb15ac292f5a2 214 PIRSF PIRSF009320 1 204 5.0E-30 T 23-10-2018 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 11 186 5.1E-57 T 23-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 SUPERFAMILY SSF56655 9 323 2.62E-107 T 23-10-2018 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 140 163 5.4E-63 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 299 324 5.4E-63 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 197 224 5.4E-63 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 171 194 5.4E-63 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 63 89 5.4E-63 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 26 53 5.4E-63 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 Gene3D G3DSA:3.30.540.10 3 187 2.0E-63 T 23-10-2018 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 Gene3D G3DSA:3.40.190.80 188 324 3.2E-51 T 23-10-2018 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 324 43.756 T 23-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PIRSF PIRSF000904 1 324 4.6E-118 T 23-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_06635 8025753c7b47c6ffbd2a8a2fa2ebb9b1 324 PIRSF PIRSF500210 1 324 1.7E-120 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG60_15820 f4742163d3a7567670d2c73480b316e8 734 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 314 724 1.9E-16 T 23-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDG60_15140 8923ca280beffa9874ccc2208956dbdb 232 Gene3D G3DSA:1.25.40.10 42 217 2.1E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15140 8923ca280beffa9874ccc2208956dbdb 232 Pfam PF09976 Tetratricopeptide repeat-like domain 14 212 2.7E-42 T 23-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CDG60_15140 8923ca280beffa9874ccc2208956dbdb 232 SUPERFAMILY SSF48452 80 192 2.98E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15140 8923ca280beffa9874ccc2208956dbdb 232 PIRSF PIRSF006170 1 217 6.7E-65 T 23-10-2018 IPR026039 Uncharacterised protein family UPF0070 CDG60_17220 cd261974d00cc83d30d39a2164d0d326 245 Gene3D G3DSA:3.40.50.360 3 183 1.8E-40 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_17220 cd261974d00cc83d30d39a2164d0d326 245 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 11 183 8.4E-71 T 23-10-2018 IPR019912 FMN reductase, MsuE-like CDG60_17220 cd261974d00cc83d30d39a2164d0d326 245 Pfam PF03358 NADPH-dependent FMN reductase 11 155 8.7E-30 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG60_17220 cd261974d00cc83d30d39a2164d0d326 245 SUPERFAMILY SSF52218 7 181 1.23E-29 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_15115 9e6c536340f2d3342d7a81571a03cf1b 141 Pfam PF12836 Helix-hairpin-helix motif 78 139 2.3E-23 T 23-10-2018 CDG60_15115 9e6c536340f2d3342d7a81571a03cf1b 141 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 77 140 2.2E-26 T 23-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CDG60_15115 9e6c536340f2d3342d7a81571a03cf1b 141 SUPERFAMILY SSF47781 70 138 6.78E-28 T 23-10-2018 IPR010994 RuvA domain 2-like CDG60_15115 9e6c536340f2d3342d7a81571a03cf1b 141 SMART SM00278 119 138 4.9 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_15115 9e6c536340f2d3342d7a81571a03cf1b 141 SMART SM00278 89 108 0.016 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_15115 9e6c536340f2d3342d7a81571a03cf1b 141 Gene3D G3DSA:1.10.150.280 69 140 9.9E-24 T 23-10-2018 CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 74 2.2E-27 T 23-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 2.1E-28 T 23-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 Gene3D G3DSA:3.30.230.10 73 165 1.9E-35 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 SUPERFAMILY SSF54768 7 75 9.73E-23 T 23-10-2018 CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 33.862 T 23-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 SUPERFAMILY SSF54211 78 157 2.23E-25 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 23-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 Gene3D G3DSA:3.30.160.20 1 72 4.6E-29 T 23-10-2018 CDG60_15905 60f46de01c004dc3330e8aef3b5a474d 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 161 1.1E-64 T 23-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG60_04760 e3534e39e56c3fe32e6500c1cbf1229e 123 Pfam PF06877 Regulator of ribonuclease activity B 11 110 4.6E-26 T 23-10-2018 IPR009671 Regulator of ribonuclease activity B domain CDG60_04760 e3534e39e56c3fe32e6500c1cbf1229e 123 Gene3D G3DSA:3.30.70.970 3 122 3.3E-10 T 23-10-2018 IPR036701 RraB-like superfamily CDG60_04760 e3534e39e56c3fe32e6500c1cbf1229e 123 SUPERFAMILY SSF89946 6 119 3.79E-31 T 23-10-2018 IPR036701 RraB-like superfamily CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 Gene3D G3DSA:2.30.110.50 32 377 3.4E-40 T 23-10-2018 CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 SUPERFAMILY SSF69255 435 528 2.46E-23 T 23-10-2018 CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 Gene3D G3DSA:3.55.50.10 111 221 3.4E-40 T 23-10-2018 CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 24 582 6.2E-65 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 584 8.5E-57 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 558 664 9.1E-35 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 Pfam PF05954 Phage late control gene D protein (GPD) 45 384 1.2E-57 T 23-10-2018 CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 850 993 1.3E-45 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 Gene3D G3DSA:3.30.1920.30 254 335 3.4E-40 T 23-10-2018 CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 SUPERFAMILY SSF69279 24 199 4.48E-37 T 23-10-2018 CDG60_01485 3ae5a47925f5b37923f49239696d393c 1124 Gene3D G3DSA:2.40.50.230 426 534 5.5E-30 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 Gene3D G3DSA:3.50.50.60 7 363 2.9E-89 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 Gene3D G3DSA:3.30.9.50 73 300 2.9E-89 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 Gene3D G3DSA:3.40.30.120 424 577 5.6E-38 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 Pfam PF01494 FAD binding domain 6 369 2.8E-96 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.8E-41 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 170 185 1.8E-41 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 354 1.8E-41 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 334 1.8E-41 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 1.8E-41 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 318 1.8E-41 T 23-10-2018 CDG60_06750 4dc29e08d4c532cbb2601a24eaf83f14 580 SUPERFAMILY SSF51905 6 375 2.85E-48 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_02025 f393aabcdc992f630ca1089846a38afb 341 SUPERFAMILY SSF56601 88 334 1.75E-58 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_02025 f393aabcdc992f630ca1089846a38afb 341 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 175 192 1.5E-13 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_02025 f393aabcdc992f630ca1089846a38afb 341 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 202 215 1.5E-13 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_02025 f393aabcdc992f630ca1089846a38afb 341 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 134 1.5E-13 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_02025 f393aabcdc992f630ca1089846a38afb 341 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 90 318 1.9E-60 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDG60_02025 f393aabcdc992f630ca1089846a38afb 341 Gene3D G3DSA:3.40.710.10 64 340 2.8E-66 T 23-10-2018 CDG60_01050 6e70ff35f7c55423b9568f21f0a620ee 216 Gene3D G3DSA:3.30.530.20 28 209 3.1E-47 T 23-10-2018 IPR023393 START-like domain superfamily CDG60_01050 6e70ff35f7c55423b9568f21f0a620ee 216 PIRSF PIRSF039033 1 214 5.3E-44 T 23-10-2018 IPR028347 START domain-containing protein CDG60_01050 6e70ff35f7c55423b9568f21f0a620ee 216 Pfam PF01852 START domain 46 203 2.8E-10 T 23-10-2018 IPR002913 START domain GO:0008289 CDG60_01050 6e70ff35f7c55423b9568f21f0a620ee 216 SUPERFAMILY SSF55961 28 204 4.13E-34 T 23-10-2018 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 Gene3D G3DSA:3.30.200.20 7 231 1.9E-92 T 23-10-2018 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 234 1.2E-77 T 23-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 SUPERFAMILY SSF56104 2 232 9.81E-79 T 23-10-2018 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 Gene3D G3DSA:3.30.470.20 85 220 1.9E-92 T 23-10-2018 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 Pfam PF01259 SAICAR synthetase 7 231 6.4E-64 T 23-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 30.896 T 23-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 23-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_17680 bef37e7a8ea146bafa19a21e517b31ef 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 23-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG60_08150 7a766cc77c584a167f04c6bb518c7609 430 SUPERFAMILY SSF51905 17 427 2.33E-45 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08150 7a766cc77c584a167f04c6bb518c7609 430 SUPERFAMILY SSF54373 293 385 5.76E-10 T 23-10-2018 CDG60_08150 7a766cc77c584a167f04c6bb518c7609 430 Pfam PF01266 FAD dependent oxidoreductase 19 421 2.1E-60 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG60_08150 7a766cc77c584a167f04c6bb518c7609 430 Gene3D G3DSA:3.30.9.10 149 384 1.7E-40 T 23-10-2018 CDG60_08150 7a766cc77c584a167f04c6bb518c7609 430 Gene3D G3DSA:3.50.50.60 118 423 1.7E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08150 7a766cc77c584a167f04c6bb518c7609 430 Gene3D G3DSA:3.50.50.60 20 67 8.7E-11 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 SUPERFAMILY SSF46689 214 260 1.93E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 3.8E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 3.8E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 SUPERFAMILY SSF51182 19 186 6.67E-10 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 Pfam PF12833 Helix-turn-helix domain 183 260 1.6E-21 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 SMART SM00342 177 259 4.9E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 255 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG60_03355 2b35f507ebd6768e9a9ac38e34b3a16b 264 Gene3D G3DSA:1.10.10.60 158 263 1.9E-25 T 23-10-2018 CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.3E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.3E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 Gene3D G3DSA:3.40.50.720 1 275 2.4E-70 T 23-10-2018 CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 SUPERFAMILY SSF51735 1 243 6.75E-57 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 Pfam PF00106 short chain dehydrogenase 2 208 3.6E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 2.0E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.0E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_10525 9f6f59248edb2afdcbd49c175abf715e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.0E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_06365 73f01e6ae6c0173e210270662b91d165 333 SMART SM00342 250 332 2.0E-5 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_06365 73f01e6ae6c0173e210270662b91d165 333 Gene3D G3DSA:1.10.10.60 202 333 1.3E-14 T 23-10-2018 CDG60_06365 73f01e6ae6c0173e210270662b91d165 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 205 5.8E-13 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_08140 c2bcce2cf2e85d4b4e61ecfeb8bf6210 229 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 225 39.666 T 23-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDG60_08140 c2bcce2cf2e85d4b4e61ecfeb8bf6210 229 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 225 3.3E-65 T 23-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDG60_08140 c2bcce2cf2e85d4b4e61ecfeb8bf6210 229 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 226 3.0E-61 T 23-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDG60_08140 c2bcce2cf2e85d4b4e61ecfeb8bf6210 229 SUPERFAMILY SSF53448 5 225 1.13E-52 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_08140 c2bcce2cf2e85d4b4e61ecfeb8bf6210 229 Gene3D G3DSA:3.90.550.10 1 228 1.1E-69 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_09020 7dc37387dcbd6ccc4a2ffd3fe040a1a4 293 Gene3D G3DSA:3.60.15.10 3 289 1.6E-102 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_09020 7dc37387dcbd6ccc4a2ffd3fe040a1a4 293 Pfam PF00753 Metallo-beta-lactamase superfamily 15 206 3.8E-18 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_09020 7dc37387dcbd6ccc4a2ffd3fe040a1a4 293 SMART SM00849 16 206 5.2E-20 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_09020 7dc37387dcbd6ccc4a2ffd3fe040a1a4 293 SUPERFAMILY SSF56281 9 290 7.58E-44 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_10230 9d698612f87bdd68f46b730e3eb82a64 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 237 1.9E-82 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDG60_10230 9d698612f87bdd68f46b730e3eb82a64 250 Gene3D G3DSA:3.40.1180.10 1 238 5.8E-89 T 23-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CDG60_10230 9d698612f87bdd68f46b730e3eb82a64 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 10 238 36.313 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDG60_10230 9d698612f87bdd68f46b730e3eb82a64 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 17 237 8.4E-74 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDG60_10230 9d698612f87bdd68f46b730e3eb82a64 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 23-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CDG60_10230 9d698612f87bdd68f46b730e3eb82a64 250 SUPERFAMILY SSF64005 7 233 9.42E-80 T 23-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CDG60_16470 2079f18e4757659459667b5d88a960b3 85 SUPERFAMILY SSF54565 1 75 6.67E-28 T 23-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16470 2079f18e4757659459667b5d88a960b3 85 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-30 T 23-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16470 2079f18e4757659459667b5d88a960b3 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.021 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16470 2079f18e4757659459667b5d88a960b3 85 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 23-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_16470 2079f18e4757659459667b5d88a960b3 85 Pfam PF00886 Ribosomal protein S16 8 68 2.1E-24 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_16470 2079f18e4757659459667b5d88a960b3 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.7E-28 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_00410 3a5d6fd272473e89db494e45fcf24dc2 236 SUPERFAMILY SSF53955 14 146 7.6E-44 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_00410 3a5d6fd272473e89db494e45fcf24dc2 236 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 43 71 - T 23-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDG60_00410 3a5d6fd272473e89db494e45fcf24dc2 236 Gene3D G3DSA:1.10.530.10 17 158 2.1E-41 T 23-10-2018 CDG60_00410 3a5d6fd272473e89db494e45fcf24dc2 236 Pfam PF01464 Transglycosylase SLT domain 25 130 1.8E-28 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 SUPERFAMILY SSF46785 15 97 9.25E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 Gene3D G3DSA:3.40.190.10 182 275 8.2E-32 T 23-10-2018 CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 Gene3D G3DSA:1.10.10.10 10 100 7.8E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 Gene3D G3DSA:3.40.190.10 109 298 8.2E-32 T 23-10-2018 CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 Pfam PF03466 LysR substrate binding domain 109 299 4.5E-10 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 8.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 8.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 8.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 1.1E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09445 be011e269b2eb0087320f92191e42b1a 305 SUPERFAMILY SSF53850 109 303 4.48E-25 T 23-10-2018 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 23-10-2018 IPR028299 ClpA/B, conserved site 2 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Gene3D G3DSA:1.10.1780.10 1 158 1.0E-36 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 14 862 0.0 T 23-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 226 338 1.8E-11 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Pfam PF07724 AAA domain (Cdc48 subfamily) 604 772 1.7E-38 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 778 848 1.1E-7 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Gene3D G3DSA:3.40.50.300 173 365 4.5E-62 T 23-10-2018 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 1.2E-30 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 1.2E-30 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 1.2E-30 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 1.2E-30 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 SUPERFAMILY SSF52540 553 841 4.76E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Gene3D G3DSA:3.40.50.300 367 551 8.5E-39 T 23-10-2018 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 SMART SM01086 778 870 0.0091 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 317 329 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 SMART SM00382 221 366 6.2E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 SMART SM00382 604 757 1.2E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 SUPERFAMILY SSF52540 182 504 3.72E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 SUPERFAMILY SSF81923 10 131 3.53E-19 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Gene3D G3DSA:1.10.8.60 778 875 7.0E-9 T 23-10-2018 CDG60_12625 0b2349646f3b01cb52207a4e3173548b 891 Gene3D G3DSA:3.40.50.300 557 776 6.2E-64 T 23-10-2018 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 SUPERFAMILY SSF51735 1 182 7.14E-75 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 SUPERFAMILY SSF48179 183 332 1.56E-64 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 Gene3D G3DSA:3.40.50.720 1 181 1.9E-79 T 23-10-2018 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.693 T 23-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 4.4E-131 T 23-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 PIRSF PIRSF000116 201 333 7.0E-13 T 23-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 PIRSF PIRSF000116 2 203 3.1E-52 T 23-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.6E-58 T 23-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 Gene3D G3DSA:1.10.3730.40 182 338 2.4E-70 T 23-10-2018 CDG60_15200 3d71adea5673a3c863f2448844d131ff 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.4E-75 T 23-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 5.3E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 5.3E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 5.3E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 Pfam PF01047 MarR family 41 95 3.8E-8 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 SUPERFAMILY SSF46785 11 142 1.86E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 Gene3D G3DSA:3.40.630.30 169 308 4.1E-24 T 23-10-2018 CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 SUPERFAMILY SSF55729 171 308 1.41E-24 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 Gene3D G3DSA:1.10.10.10 3 147 9.0E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 Pfam PF00583 Acetyltransferase (GNAT) family 207 295 2.3E-14 T 23-10-2018 IPR000182 GNAT domain CDG60_12535 bb31e80f0a6b96ba1bef21bc9ef9aa98 320 SMART SM00347 31 131 1.5E-8 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 Gene3D G3DSA:1.10.1660.10 1 128 5.0E-30 T 23-10-2018 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 Pfam PF09278 MerR, DNA binding 47 112 9.9E-14 T 23-10-2018 IPR015358 Transcription regulator MerR, DNA binding CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 SUPERFAMILY SSF46955 5 127 1.87E-26 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 2.1E-10 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 2.1E-10 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.1E-10 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 Pfam PF00376 MerR family regulatory protein 6 42 7.5E-11 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 5 141 1.6E-57 T 23-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 CDG60_03605 66a58d45d0fcecd69dcf93d77c3c5e77 165 SMART SM00422 5 73 2.5E-21 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG60_15740 3334494ff0da26244fd9a946fdf5848a 213 Gene3D G3DSA:3.90.850.10 1 205 1.1E-63 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG60_15740 3334494ff0da26244fd9a946fdf5848a 213 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 7 199 3.9E-45 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDG60_15740 3334494ff0da26244fd9a946fdf5848a 213 SUPERFAMILY SSF56529 4 200 4.84E-61 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 2.5E-20 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 3.1E-30 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 3.1E-30 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 3.1E-30 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 3.1E-30 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 SUPERFAMILY SSF53738 151 259 3.92E-25 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 438 1.8E-9 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Gene3D G3DSA:3.40.120.10 253 371 7.5E-30 T 23-10-2018 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 SUPERFAMILY SSF53738 261 367 1.26E-27 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 1.4E-32 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 SUPERFAMILY SSF55957 370 455 8.37E-18 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 SUPERFAMILY SSF53738 4 175 2.28E-37 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 371 3.2E-21 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Gene3D G3DSA:3.40.120.10 170 252 2.3E-28 T 23-10-2018 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Gene3D G3DSA:3.30.310.50 372 456 4.6E-25 T 23-10-2018 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 23-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG60_01155 20c0a20d781a6a14cb12412fe6cfa1be 456 Gene3D G3DSA:3.40.120.10 2 147 1.1E-49 T 23-10-2018 CDG60_13320 6fb980793a8a2b7dfddeec8aaf32dd3e 406 SUPERFAMILY SSF103473 10 400 7.59E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_13320 6fb980793a8a2b7dfddeec8aaf32dd3e 406 Gene3D G3DSA:1.20.1250.20 224 405 3.1E-19 T 23-10-2018 CDG60_13320 6fb980793a8a2b7dfddeec8aaf32dd3e 406 Pfam PF07690 Major Facilitator Superfamily 32 265 1.3E-24 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_13320 6fb980793a8a2b7dfddeec8aaf32dd3e 406 Gene3D G3DSA:1.20.1250.20 21 210 3.5E-22 T 23-10-2018 CDG60_10350 40491b49ca38810522bc31858cc29bd3 257 SUPERFAMILY SSF51556 2 256 1.07E-78 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_10350 40491b49ca38810522bc31858cc29bd3 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 2.1E-80 T 23-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CDG60_10350 40491b49ca38810522bc31858cc29bd3 257 Gene3D G3DSA:3.20.20.140 1 257 1.0E-83 T 23-10-2018 CDG60_10350 40491b49ca38810522bc31858cc29bd3 257 PIRSF PIRSF005902 1 257 4.6E-71 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG60_10350 40491b49ca38810522bc31858cc29bd3 257 Pfam PF01026 TatD related DNase 3 254 4.4E-69 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 23-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 Gene3D G3DSA:1.10.1050.10 6 208 5.3E-78 T 23-10-2018 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.954 T 23-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 Pfam PF01479 S4 domain 99 145 5.7E-18 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 Gene3D G3DSA:3.10.290.10 97 193 5.3E-78 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 SUPERFAMILY SSF55174 2 208 1.24E-66 T 23-10-2018 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 7.1E-80 T 23-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 SMART SM01390 3 97 4.5E-45 T 23-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 SMART SM00363 98 162 1.7E-16 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15870 3cf61e0b4ac5545493e0f43cf077751d 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 4.8E-31 T 23-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CDG60_14880 1216985eb1cb8b989ad6ccd3acc57ef7 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 23-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CDG60_14880 1216985eb1cb8b989ad6ccd3acc57ef7 274 Gene3D G3DSA:3.60.110.10 1 274 1.6E-76 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG60_14880 1216985eb1cb8b989ad6ccd3acc57ef7 274 SUPERFAMILY SSF56317 4 269 5.36E-64 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG60_14880 1216985eb1cb8b989ad6ccd3acc57ef7 274 Pfam PF00795 Carbon-nitrogen hydrolase 4 259 6.4E-43 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDG60_07440 70fd66a588f9993193f9e4999ec7241b 146 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 125 7.1E-11 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_07440 70fd66a588f9993193f9e4999ec7241b 146 SUPERFAMILY SSF55083 8 131 3.4E-12 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_07440 70fd66a588f9993193f9e4999ec7241b 146 Gene3D G3DSA:3.30.70.560 6 137 1.1E-10 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_13820 16dc42780b57f2ddde3af64faeb16cd4 498 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 478 6.5E-125 T 23-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CDG60_13820 16dc42780b57f2ddde3af64faeb16cd4 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 3.8E-6 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13820 16dc42780b57f2ddde3af64faeb16cd4 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 3.8E-6 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13820 16dc42780b57f2ddde3af64faeb16cd4 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 3.8E-6 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13820 16dc42780b57f2ddde3af64faeb16cd4 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 3.8E-6 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13820 16dc42780b57f2ddde3af64faeb16cd4 498 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 478 17.436 T 23-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CDG60_13820 16dc42780b57f2ddde3af64faeb16cd4 498 Pfam PF00361 Proton-conducting membrane transporter 127 423 1.4E-72 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02630 96a996d1fb9398c835f0cf74b51ee26f 314 SUPERFAMILY SSF53335 82 311 2.79E-49 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_02630 96a996d1fb9398c835f0cf74b51ee26f 314 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 221 235 - T 23-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CDG60_02630 96a996d1fb9398c835f0cf74b51ee26f 314 Gene3D G3DSA:3.40.50.150 94 314 1.6E-74 T 23-10-2018 CDG60_02630 96a996d1fb9398c835f0cf74b51ee26f 314 Pfam PF01209 ubiE/COQ5 methyltransferase family 84 313 1.0E-99 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDG60_02630 96a996d1fb9398c835f0cf74b51ee26f 314 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 88 313 8.5E-83 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDG60_02630 96a996d1fb9398c835f0cf74b51ee26f 314 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 79 313 38.655 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDG60_02630 96a996d1fb9398c835f0cf74b51ee26f 314 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 99 114 - T 23-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CDG60_11465 2c3cb4a36ba2e8b48c455443a1b8dad4 1124 Gene3D G3DSA:1.10.3210.30 88 299 3.9E-10 T 23-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CDG60_11465 2c3cb4a36ba2e8b48c455443a1b8dad4 1124 SUPERFAMILY SSF52540 429 891 4.66E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11465 2c3cb4a36ba2e8b48c455443a1b8dad4 1124 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1118 9.5E-281 T 23-10-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type CDG60_11655 5d097c5997041cebd3de6dff87f6eda0 214 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_11655 5d097c5997041cebd3de6dff87f6eda0 214 SUPERFAMILY SSF55120 7 213 8.48E-59 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_11655 5d097c5997041cebd3de6dff87f6eda0 214 Pfam PF00849 RNA pseudouridylate synthase 15 164 2.8E-30 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_11655 5d097c5997041cebd3de6dff87f6eda0 214 Gene3D G3DSA:3.30.2350.10 5 212 6.5E-65 T 23-10-2018 CDG60_09550 62b00ffe9e3f940f33c71682ab1f2c6b 74 Pfam PF05901 Excalibur calcium-binding domain 19 57 1.8E-5 T 23-10-2018 IPR008613 Excalibur calcium-binding domain CDG60_09550 62b00ffe9e3f940f33c71682ab1f2c6b 74 SMART SM00894 17 58 9.7E-5 T 23-10-2018 IPR008613 Excalibur calcium-binding domain CDG60_03360 ab4272631633b1913456b69e37f47533 289 SUPERFAMILY SSF103481 34 132 9.55E-11 T 23-10-2018 CDG60_03360 ab4272631633b1913456b69e37f47533 289 Pfam PF00892 EamA-like transporter family 2 129 3.9E-15 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_03360 ab4272631633b1913456b69e37f47533 289 Pfam PF00892 EamA-like transporter family 145 280 6.6E-22 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_03360 ab4272631633b1913456b69e37f47533 289 SUPERFAMILY SSF103481 180 286 2.09E-15 T 23-10-2018 CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.34 T 23-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.1E-23 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 23-10-2018 IPR018336 Ribonuclease PH, conserved site CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 SUPERFAMILY SSF54211 1 181 1.97E-46 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.1E-116 T 23-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 Gene3D G3DSA:3.30.230.70 10 237 4.5E-65 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 2.7E-10 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_17790 9f519cd01478b0a41e330a6968f03528 238 SUPERFAMILY SSF55666 153 236 1.83E-24 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG60_07175 68944d98d8f8585f74c801342309de76 149 SUPERFAMILY SSF55729 3 140 5.66E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_07175 68944d98d8f8585f74c801342309de76 149 Gene3D G3DSA:3.40.630.30 47 146 1.0E-20 T 23-10-2018 CDG60_07175 68944d98d8f8585f74c801342309de76 149 Pfam PF00583 Acetyltransferase (GNAT) family 47 132 1.7E-12 T 23-10-2018 IPR000182 GNAT domain CDG60_04680 8cf813806e58c1722f983e345cc46183 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 345 4.5E-130 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDG60_04680 8cf813806e58c1722f983e345cc46183 372 Gene3D G3DSA:3.40.50.300 102 356 2.8E-86 T 23-10-2018 CDG60_04680 8cf813806e58c1722f983e345cc46183 372 Gene3D G3DSA:3.30.450.90 1 100 4.3E-26 T 23-10-2018 CDG60_04680 8cf813806e58c1722f983e345cc46183 372 SUPERFAMILY SSF52540 4 338 1.54E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04680 8cf813806e58c1722f983e345cc46183 372 SMART SM00382 123 248 3.0E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_04680 8cf813806e58c1722f983e345cc46183 372 Pfam PF00437 Type II/IV secretion system protein 10 250 2.4E-36 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 Gene3D G3DSA:1.20.81.30 254 363 4.3E-26 T 23-10-2018 CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 23-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 2.7E-143 T 23-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.6E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.6E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.6E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.6E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 Gene3D G3DSA:1.20.81.30 55 170 1.5E-27 T 23-10-2018 CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 Pfam PF00482 Type II secretion system (T2SS), protein F 70 191 2.1E-29 T 23-10-2018 IPR018076 Type II secretion system F domain CDG60_02730 e5643082744c96008b4d49e3db12a6b9 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 5.7E-28 T 23-10-2018 IPR018076 Type II secretion system F domain CDG60_12835 78ccd4e40f1421e48f23b110a0c86459 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 240 8.6E-62 T 23-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDG60_12835 78ccd4e40f1421e48f23b110a0c86459 252 Gene3D G3DSA:3.40.1390.30 15 237 1.4E-79 T 23-10-2018 CDG60_12835 78ccd4e40f1421e48f23b110a0c86459 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 250 2.6E-62 T 23-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDG60_12835 78ccd4e40f1421e48f23b110a0c86459 252 SUPERFAMILY SSF102705 1 251 1.44E-76 T 23-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDG60_12835 78ccd4e40f1421e48f23b110a0c86459 252 Gene3D G3DSA:3.40.1390.30 98 223 1.4E-79 T 23-10-2018 CDG60_09585 bbe18c1d9514b4c76c6798fda1ee24f8 119 Gene3D G3DSA:1.10.10.10 2 118 1.6E-38 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09585 bbe18c1d9514b4c76c6798fda1ee24f8 119 Pfam PF01638 HxlR-like helix-turn-helix 19 106 3.5E-22 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type CDG60_09585 bbe18c1d9514b4c76c6798fda1ee24f8 119 SUPERFAMILY SSF46785 6 111 6.69E-34 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01015 e212580aa4075149983eb50649151688 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 1.0E-13 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01015 e212580aa4075149983eb50649151688 205 SUPERFAMILY SSF46689 7 82 4.36E-18 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_01015 e212580aa4075149983eb50649151688 205 Gene3D G3DSA:1.10.357.10 3 205 1.0E-38 T 23-10-2018 CDG60_01015 e212580aa4075149983eb50649151688 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01015 e212580aa4075149983eb50649151688 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01615 effce5fc627c51187a71c0ca6a08655a 209 SUPERFAMILY SSF48498 99 208 2.42E-15 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_01615 effce5fc627c51187a71c0ca6a08655a 209 SUPERFAMILY SSF46689 9 78 2.55E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_01615 effce5fc627c51187a71c0ca6a08655a 209 Gene3D G3DSA:1.10.10.60 8 62 2.2E-17 T 23-10-2018 CDG60_01615 effce5fc627c51187a71c0ca6a08655a 209 Gene3D G3DSA:1.10.357.10 63 209 4.1E-19 T 23-10-2018 CDG60_01615 effce5fc627c51187a71c0ca6a08655a 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.8E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01615 effce5fc627c51187a71c0ca6a08655a 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.8E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01615 effce5fc627c51187a71c0ca6a08655a 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 2.0E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_09950 cb86106bbe943f7f4dbb7efd786077a7 143 Pfam PF00571 CBS domain 15 61 6.9E-10 T 23-10-2018 IPR000644 CBS domain CDG60_09950 cb86106bbe943f7f4dbb7efd786077a7 143 Pfam PF00571 CBS domain 73 125 6.5E-15 T 23-10-2018 IPR000644 CBS domain CDG60_09950 cb86106bbe943f7f4dbb7efd786077a7 143 Gene3D G3DSA:3.10.580.10 1 143 3.8E-47 T 23-10-2018 CDG60_09950 cb86106bbe943f7f4dbb7efd786077a7 143 SMART SM00116 80 127 8.0E-10 T 23-10-2018 IPR000644 CBS domain CDG60_09950 cb86106bbe943f7f4dbb7efd786077a7 143 SMART SM00116 15 62 1.7E-8 T 23-10-2018 IPR000644 CBS domain CDG60_09950 cb86106bbe943f7f4dbb7efd786077a7 143 SUPERFAMILY SSF54631 13 141 1.15E-34 T 23-10-2018 CDG60_17105 2947932cf618c0c38cb961875826fcfe 154 SUPERFAMILY SSF54637 14 150 1.07E-21 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_17105 2947932cf618c0c38cb961875826fcfe 154 Gene3D G3DSA:3.10.129.10 10 153 4.8E-46 T 23-10-2018 CDG60_17105 2947932cf618c0c38cb961875826fcfe 154 Pfam PF14539 Domain of unknown function (DUF4442) 17 150 5.9E-53 T 23-10-2018 IPR027961 Protein of unknown function DUF4442 CDG60_04410 27170c36ab286947a47bfa257a7996fb 366 Pfam PF05987 Bacterial protein of unknown function (DUF898) 36 359 1.8E-81 T 23-10-2018 IPR010295 Protein of unknown function DUF898 CDG60_00250 9b2992d3e11f65741b8325846faf0415 229 PIRSF PIRSF009320 9 229 5.7E-41 T 23-10-2018 CDG60_00250 9b2992d3e11f65741b8325846faf0415 229 Gene3D G3DSA:3.40.50.300 9 224 3.4E-49 T 23-10-2018 CDG60_00250 9b2992d3e11f65741b8325846faf0415 229 SUPERFAMILY SSF52540 10 226 4.7E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00250 9b2992d3e11f65741b8325846faf0415 229 Pfam PF13614 AAA domain 68 140 1.2E-6 T 23-10-2018 IPR025669 AAA domain CDG60_00250 9b2992d3e11f65741b8325846faf0415 229 Pfam PF13614 AAA domain 9 53 6.5E-16 T 23-10-2018 IPR025669 AAA domain CDG60_11805 68cc6b85ac56ef3e7f2557324fc89d2c 329 Pfam PF08908 Domain of unknown function (DUF1852) 1 318 6.5E-164 T 23-10-2018 IPR015004 Protein of unknown function DUF1852 CDG60_11805 68cc6b85ac56ef3e7f2557324fc89d2c 329 PIRSF PIRSF034367 1 323 3.1E-165 T 23-10-2018 IPR015004 Protein of unknown function DUF1852 CDG60_12010 f4319f25ff572e713ebd885abe7a384e 189 SUPERFAMILY SSF48498 79 180 2.45E-9 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_12010 f4319f25ff572e713ebd885abe7a384e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 7.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_12010 f4319f25ff572e713ebd885abe7a384e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 7.0E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_12010 f4319f25ff572e713ebd885abe7a384e 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 1.4E-13 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_12010 f4319f25ff572e713ebd885abe7a384e 189 SUPERFAMILY SSF46689 3 66 9.23E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_12010 f4319f25ff572e713ebd885abe7a384e 189 Gene3D G3DSA:1.10.357.10 1 188 2.2E-36 T 23-10-2018 CDG60_07055 b26a0fd711b083385cc7f9f24b95a677 124 Pfam PF01638 HxlR-like helix-turn-helix 27 114 3.2E-28 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type CDG60_07055 b26a0fd711b083385cc7f9f24b95a677 124 Gene3D G3DSA:1.10.10.10 2 123 1.5E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_07055 b26a0fd711b083385cc7f9f24b95a677 124 SUPERFAMILY SSF46785 13 117 1.62E-31 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 Pfam PF16326 ABC transporter C-terminal domain 564 633 2.4E-19 T 23-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 Gene3D G3DSA:3.40.50.300 281 553 1.8E-59 T 23-10-2018 CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 SMART SM00382 344 514 1.6E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 SMART SM00382 28 229 2.2E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 Pfam PF00005 ABC transporter 19 183 1.7E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 Pfam PF00005 ABC transporter 336 468 4.0E-18 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 Gene3D G3DSA:1.10.287.380 554 637 1.7E-19 T 23-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 SUPERFAMILY SSF52540 306 513 1.08E-37 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 Pfam PF12848 ABC transporter 223 296 1.7E-11 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 Gene3D G3DSA:3.40.50.300 6 278 2.9E-65 T 23-10-2018 CDG60_03225 48c291763d2f0ce763a747b0112187f5 637 SUPERFAMILY SSF52540 3 242 1.29E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14385 024238585ebd45c66025c1187ef2ce55 248 Pfam PF02661 Fic/DOC family 90 187 2.1E-26 T 23-10-2018 IPR003812 Fido domain CDG60_14385 024238585ebd45c66025c1187ef2ce55 248 Gene3D G3DSA:1.10.3290.10 1 242 5.9E-77 T 23-10-2018 IPR036597 Fido-like domain superfamily CDG60_14385 024238585ebd45c66025c1187ef2ce55 248 SUPERFAMILY SSF140931 67 236 8.24E-48 T 23-10-2018 IPR036597 Fido-like domain superfamily CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 Gene3D G3DSA:3.90.110.10 157 328 3.0E-63 T 23-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 56.607 T 23-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 SUPERFAMILY SSF51735 4 157 2.56E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 SUPERFAMILY SSF56327 159 327 4.63E-61 T 23-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 321 2.9E-33 T 23-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 Gene3D G3DSA:3.40.50.720 1 156 1.4E-56 T 23-10-2018 CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 322 7.5E-146 T 23-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 5.5E-35 T 23-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_15480 b9ad7988af231baf1b35e87a9af83523 328 PIRSF PIRSF000102 1 325 7.8E-64 T 23-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CDG60_03380 ce198ea165928bb81fecba7eb9ed89af 427 SUPERFAMILY SSF53474 75 423 5.49E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_03380 ce198ea165928bb81fecba7eb9ed89af 427 PIRSF PIRSF029171 6 427 5.9E-63 T 23-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CDG60_03380 ce198ea165928bb81fecba7eb9ed89af 427 Gene3D G3DSA:3.40.50.1820 350 426 3.2E-7 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_03380 ce198ea165928bb81fecba7eb9ed89af 427 Gene3D G3DSA:3.40.50.1820 38 258 5.0E-42 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_16815 d313ded97ebe3e61fcd0f8e70f85b7b8 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 23 333 6.2E-131 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDG60_16815 d313ded97ebe3e61fcd0f8e70f85b7b8 338 SUPERFAMILY SSF53850 29 334 6.32E-80 T 23-10-2018 CDG60_16815 d313ded97ebe3e61fcd0f8e70f85b7b8 338 Gene3D G3DSA:3.40.190.10 35 302 2.2E-126 T 23-10-2018 CDG60_16815 d313ded97ebe3e61fcd0f8e70f85b7b8 338 Pfam PF13531 Bacterial extracellular solute-binding protein 41 287 2.6E-38 T 23-10-2018 CDG60_16815 d313ded97ebe3e61fcd0f8e70f85b7b8 338 Gene3D G3DSA:3.40.190.10 122 332 2.2E-126 T 23-10-2018 CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 SMART SM00487 36 226 3.1E-27 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 Gene3D G3DSA:3.40.50.10810 36 308 9.0E-62 T 23-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 Pfam PF00271 Helicase conserved C-terminal domain 418 545 1.7E-16 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 SUPERFAMILY SSF52540 157 589 8.16E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 SUPERFAMILY SSF52540 30 234 5.12E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 Gene3D G3DSA:3.40.50.300 322 638 1.7E-39 T 23-10-2018 CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 SMART SM00490 465 545 1.9E-19 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_14510 e1c491b906dfaf600cb2bb5865b42ac8 952 Pfam PF00176 SNF2 family N-terminal domain 9 279 3.3E-34 T 23-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 879 0.0 T 23-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 Gene3D G3DSA:3.40.50.970 53 467 7.0E-132 T 23-10-2018 CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 SUPERFAMILY SSF52518 54 464 4.16E-136 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 135 293 2.0E-8 T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 Gene3D G3DSA:3.40.50.920 702 882 4.4E-66 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 SUPERFAMILY SSF52922 697 879 5.23E-51 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 Gene3D G3DSA:3.40.50.970 468 701 1.0E-107 T 23-10-2018 CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 SUPERFAMILY SSF52518 469 695 2.35E-95 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG60_17350 c8218d6dc0e4af222518df6bd177a992 902 PIRSF PIRSF000156 2 882 0.0 T 23-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CDG60_17365 f884652fce95129a43a7e92b142883db 300 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 9.1E-110 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG60_17365 f884652fce95129a43a7e92b142883db 300 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 274 1.3E-97 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG60_17365 f884652fce95129a43a7e92b142883db 300 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 42.407 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG60_17365 f884652fce95129a43a7e92b142883db 300 SUPERFAMILY SSF54211 3 125 2.73E-37 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_17365 f884652fce95129a43a7e92b142883db 300 Gene3D G3DSA:3.30.230.20 1 127 6.6E-43 T 23-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG60_17365 f884652fce95129a43a7e92b142883db 300 SUPERFAMILY SSF54211 133 277 4.02E-48 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_17365 f884652fce95129a43a7e92b142883db 300 Gene3D G3DSA:3.30.1700.10 128 300 2.0E-61 T 23-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG60_05370 2298a7ebb7bd1ddaf97298d0414adf37 310 Gene3D G3DSA:3.30.70.100 9 110 5.7E-28 T 23-10-2018 CDG60_05370 2298a7ebb7bd1ddaf97298d0414adf37 310 Gene3D G3DSA:3.40.250.10 114 261 1.8E-50 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_05370 2298a7ebb7bd1ddaf97298d0414adf37 310 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 267 42.733 T 23-10-2018 IPR020936 Uncharacterised protein family UPF0176 CDG60_05370 2298a7ebb7bd1ddaf97298d0414adf37 310 SUPERFAMILY SSF52821 122 250 1.0E-31 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_05370 2298a7ebb7bd1ddaf97298d0414adf37 310 Pfam PF00581 Rhodanese-like domain 128 223 4.4E-12 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_05370 2298a7ebb7bd1ddaf97298d0414adf37 310 SMART SM00450 126 227 1.6E-21 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_08010 8f3b7a3f533d576a386259af37368753 414 SUPERFAMILY SSF56935 21 414 3.36E-38 T 23-10-2018 CDG60_08010 8f3b7a3f533d576a386259af37368753 414 Gene3D G3DSA:2.40.160.60 30 414 4.0E-19 T 23-10-2018 CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 SMART SM00490 269 350 8.1E-32 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 SUPERFAMILY SSF52540 85 371 2.67E-69 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 Pfam PF00271 Helicase conserved C-terminal domain 245 350 4.1E-26 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 Gene3D G3DSA:3.40.50.300 229 390 6.4E-48 T 23-10-2018 CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 Pfam PF00270 DEAD/DEAH box helicase 27 200 2.0E-45 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 Gene3D G3DSA:3.40.50.300 1 228 2.0E-72 T 23-10-2018 CDG60_16140 2f67ab2157eef070ee93073a1913e3c8 626 SMART SM00487 22 232 5.0E-55 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_11020 498f03490fd217f78551b7f28d722be2 211 Pfam PF04403 Paraquat-inducible protein A 48 205 2.8E-36 T 23-10-2018 IPR007498 Intermembrane transport protein PqiA-like CDG60_07345 a32d1cb05e57c0638273b35a9459d4ea 185 SUPERFAMILY SSF51905 22 183 9.07E-11 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_07345 a32d1cb05e57c0638273b35a9459d4ea 185 Gene3D G3DSA:3.50.50.60 15 184 2.2E-5 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_13815 14a423dbb0cc259d0cf795d4b8eb6199 211 Gene3D G3DSA:3.40.50.2020 1 207 8.9E-71 T 23-10-2018 CDG60_13815 14a423dbb0cc259d0cf795d4b8eb6199 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.897 T 23-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CDG60_13815 14a423dbb0cc259d0cf795d4b8eb6199 211 Pfam PF14681 Uracil phosphoribosyltransferase 7 206 2.2E-63 T 23-10-2018 CDG60_13815 14a423dbb0cc259d0cf795d4b8eb6199 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 3.8E-86 T 23-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CDG60_13815 14a423dbb0cc259d0cf795d4b8eb6199 211 SUPERFAMILY SSF53271 3 206 2.62E-66 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_15100 c449ea24d5576b3ba3d5f29574a0c010 269 PIRSF PIRSF000388 1 268 6.4E-92 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG60_15100 c449ea24d5576b3ba3d5f29574a0c010 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 7 266 1.8E-96 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG60_15100 c449ea24d5576b3ba3d5f29574a0c010 269 SUPERFAMILY SSF51621 2 265 3.66E-95 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG60_15100 c449ea24d5576b3ba3d5f29574a0c010 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 265 40.059 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG60_15100 c449ea24d5576b3ba3d5f29574a0c010 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 5.1E-100 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG60_15100 c449ea24d5576b3ba3d5f29574a0c010 269 Gene3D G3DSA:3.20.20.60 1 269 1.0E-98 T 23-10-2018 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 Gene3D G3DSA:1.20.970.10 1 70 1.2E-29 T 23-10-2018 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 SUPERFAMILY SSF47648 1 70 7.85E-20 T 23-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 Pfam PF00591 Glycosyl transferase family, a/b domain 76 330 3.2E-100 T 23-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 Gene3D G3DSA:3.40.1030.10 71 348 1.2E-102 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 66 1.4E-19 T 23-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 SUPERFAMILY SSF52418 75 342 1.13E-87 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 337 3.0E-119 T 23-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CDG60_12980 c161306ca5c8db41c4b8d88db797401a 348 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 38.106 T 23-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CDG60_07715 1cda8e9d965cab150251255b15cc8f98 203 SUPERFAMILY SSF47616 81 199 8.38E-23 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG60_07715 1cda8e9d965cab150251255b15cc8f98 203 SUPERFAMILY SSF52833 1 84 3.78E-16 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_07715 1cda8e9d965cab150251255b15cc8f98 203 Gene3D G3DSA:1.20.1050.10 83 189 7.1E-60 T 23-10-2018 CDG60_07715 1cda8e9d965cab150251255b15cc8f98 203 Gene3D G3DSA:3.40.30.10 3 195 7.1E-60 T 23-10-2018 CDG60_07715 1cda8e9d965cab150251255b15cc8f98 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.1E-7 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_07715 1cda8e9d965cab150251255b15cc8f98 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 189 5.7E-8 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG60_03340 ca487a5a2d7719bfb9e9cc858023e69b 260 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 257 6.7E-8 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG60_03340 ca487a5a2d7719bfb9e9cc858023e69b 260 Pfam PF13103 TonB C terminal 192 243 6.6E-5 T 23-10-2018 CDG60_03340 ca487a5a2d7719bfb9e9cc858023e69b 260 SUPERFAMILY SSF74653 58 257 3.01E-6 T 23-10-2018 CDG60_03985 0ebe05f7f86d9f6fccc32992f0ace8b5 216 SUPERFAMILY SSF51366 4 210 8.79E-59 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_03985 0ebe05f7f86d9f6fccc32992f0ace8b5 216 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 208 6.1E-56 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG60_03985 0ebe05f7f86d9f6fccc32992f0ace8b5 216 Gene3D G3DSA:3.20.20.70 2 215 5.4E-66 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_03985 0ebe05f7f86d9f6fccc32992f0ace8b5 216 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 213 39.776 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 SUPERFAMILY SSF48179 618 708 1.53E-15 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 Gene3D G3DSA:1.10.1040.50 498 701 2.9E-57 T 23-10-2018 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.1E-59 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 Gene3D G3DSA:3.40.50.720 315 497 3.5E-65 T 23-10-2018 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 Gene3D G3DSA:3.90.226.10 1 313 4.1E-99 T 23-10-2018 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 SUPERFAMILY SSF48179 496 634 9.35E-22 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 SUPERFAMILY SSF51735 314 495 4.18E-55 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 597 4.9E-17 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 202 4.3E-31 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG60_04295 454955da85da7fe864f00e6b47a5d468 710 SUPERFAMILY SSF52096 1 295 4.29E-61 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 96 367 1.5E-107 T 23-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 95 368 60.424 T 23-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 Gene3D G3DSA:3.40.50.300 165 356 1.1E-114 T 23-10-2018 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 Gene3D G3DSA:1.20.120.140 68 366 1.1E-114 T 23-10-2018 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 SUPERFAMILY SSF47364 66 146 2.36E-19 T 23-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 SUPERFAMILY SSF52540 165 368 2.79E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 SMART SM00962 167 368 3.8E-120 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 341 354 - T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 SMART SM00382 166 346 1.2E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 Pfam PF00448 SRP54-type protein, GTPase domain 167 367 8.7E-77 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 SMART SM00963 71 152 1.6E-24 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_09915 71d06d766865b53edce237c7d7edc82d 371 Pfam PF02881 SRP54-type protein, helical bundle domain 86 148 4.8E-11 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG60_15485 a42fd7801a83ba1c0295ba7ac69ec339 217 Gene3D G3DSA:3.90.730.10 30 216 3.2E-6 T 23-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CDG60_15485 a42fd7801a83ba1c0295ba7ac69ec339 217 SUPERFAMILY SSF55895 36 213 4.58E-14 T 23-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CDG60_01175 78f3dc4078279affbdbb169de0a7084c 315 SUPERFAMILY SSF81631 179 284 2.28E-7 T 23-10-2018 CDG60_01175 78f3dc4078279affbdbb169de0a7084c 315 Pfam PF09249 tRNA nucleotidyltransferase, second domain 223 284 9.9E-5 T 23-10-2018 IPR015329 tRNA nucleotidyltransferase, substrate binding GO:0004810|GO:0016437 CDG60_01175 78f3dc4078279affbdbb169de0a7084c 315 Gene3D G3DSA:3.30.460.10 20 172 5.3E-8 T 23-10-2018 CDG60_01175 78f3dc4078279affbdbb169de0a7084c 315 SUPERFAMILY SSF81301 1 170 1.47E-18 T 23-10-2018 CDG60_06020 4fc2a0b432f87c4ab045d1deb1d631dc 135 SUPERFAMILY SSF52980 2 102 3.43E-20 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_06020 4fc2a0b432f87c4ab045d1deb1d631dc 135 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 116 3.5E-31 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 CDG60_06020 4fc2a0b432f87c4ab045d1deb1d631dc 135 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 111 18.607 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 CDG60_06020 4fc2a0b432f87c4ab045d1deb1d631dc 135 Pfam PF02021 Uncharacterised protein family UPF0102 7 97 5.0E-24 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 CDG60_06020 4fc2a0b432f87c4ab045d1deb1d631dc 135 Gene3D G3DSA:3.40.1350.10 6 127 5.6E-30 T 23-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Gene3D G3DSA:2.40.50.140 321 393 3.6E-32 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 334 349 - T 23-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SUPERFAMILY SSF56091 5 319 6.17E-113 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 325 401 8.1E-33 T 23-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Gene3D G3DSA:2.20.70.80 396 433 5.4E-14 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Gene3D G3DSA:1.10.150.20 511 589 1.2E-27 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 PIRSF PIRSF001604 1 675 1.4E-242 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SUPERFAMILY SSF52113 596 671 6.87E-18 T 23-10-2018 IPR036420 BRCT domain superfamily CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SMART SM00292 596 673 1.3E-11 T 23-10-2018 IPR001357 BRCT domain CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Gene3D G3DSA:3.30.470.90 73 320 2.3E-96 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SMART SM00532 5 451 2.2E-240 T 23-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 597 669 1.6E-12 T 23-10-2018 IPR001357 BRCT domain CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 666 2.0E-242 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Pfam PF14520 Helix-hairpin-helix domain 449 505 2.7E-4 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SUPERFAMILY SSF47781 407 588 3.5E-60 T 23-10-2018 IPR010994 RuvA domain 2-like CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 320 4.7E-124 T 23-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Gene3D G3DSA:1.10.150.20 435 510 5.3E-27 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 410 437 1.5E-7 T 23-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Gene3D G3DSA:3.40.50.10190 590 672 5.4E-26 T 23-10-2018 IPR036420 BRCT domain superfamily CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Hamap MF_01588 DNA ligase [ligA]. 4 670 50.755 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Gene3D G3DSA:1.10.287.610 1 72 2.4E-25 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 Pfam PF12826 Helix-hairpin-helix motif 516 578 1.3E-21 T 23-10-2018 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SUPERFAMILY SSF50249 322 402 6.51E-27 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SMART SM00278 549 568 330.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SMART SM00278 485 504 2.2 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SMART SM00278 517 536 13.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_04875 7465004426246ca5ba8c126bf6baeb29 676 SMART SM00278 449 468 510.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 Gene3D G3DSA:2.30.42.10 269 354 1.5E-10 T 23-10-2018 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 575 723 9.5E-32 T 23-10-2018 IPR020992 Tail specific protease, C-terminal CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 Pfam PF03572 Peptidase family S41 396 569 9.7E-40 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 SUPERFAMILY SSF52096 226 575 7.62E-52 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 SUPERFAMILY SSF50156 273 360 4.81E-11 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 275 352 4.3E-8 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 238 590 5.7E-73 T 23-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 SMART SM00245 361 571 4.2E-35 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 SMART SM00228 277 357 5.5E-6 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG60_03395 d8fad5af6006cc7d7552f47a24f268aa 731 Gene3D G3DSA:3.90.226.10 360 590 3.0E-53 T 23-10-2018 CDG60_09940 3456a6825e512db4c6ae28332f01d55f 77 SUPERFAMILY SSF81901 17 74 1.7E-7 T 23-10-2018 CDG60_09940 3456a6825e512db4c6ae28332f01d55f 77 Gene3D G3DSA:1.25.40.10 3 77 4.3E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_14130 4b5ade7dd72b4d9f7d7522348c4a8fa0 273 SUPERFAMILY SSF111364 25 273 1.03E-16 T 23-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDG60_00435 33e5cb48e97d02e728408bc5441043c8 332 SMART SM00470 40 133 8.6E-15 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG60_00435 33e5cb48e97d02e728408bc5441043c8 332 SUPERFAMILY SSF109709 127 193 2.25E-6 T 23-10-2018 CDG60_00435 33e5cb48e97d02e728408bc5441043c8 332 Pfam PF02195 ParB-like nuclease domain 42 132 1.9E-14 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG60_00435 33e5cb48e97d02e728408bc5441043c8 332 Gene3D G3DSA:1.10.10.2830 120 229 8.4E-6 T 23-10-2018 CDG60_00435 33e5cb48e97d02e728408bc5441043c8 332 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 213 2.4E-22 T 23-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CDG60_00435 33e5cb48e97d02e728408bc5441043c8 332 SUPERFAMILY SSF110849 31 136 1.17E-16 T 23-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CDG60_00435 33e5cb48e97d02e728408bc5441043c8 332 Gene3D G3DSA:3.90.1530.30 53 117 9.4E-13 T 23-10-2018 CDG60_11450 32c91d201f5e3eec0abd70bdf1379c05 337 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 8 334 8.4E-126 T 23-10-2018 IPR013399 CRISPR-associated protein Csy3 CDG60_11450 32c91d201f5e3eec0abd70bdf1379c05 337 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 8 332 4.0E-145 T 23-10-2018 IPR013399 CRISPR-associated protein Csy3 CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 Gene3D G3DSA:1.10.10.10 2 94 8.9E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 SUPERFAMILY SSF46785 3 88 3.35E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 Gene3D G3DSA:3.40.190.10 166 272 7.0E-46 T 23-10-2018 CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 Pfam PF03466 LysR substrate binding domain 87 295 1.5E-31 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.0E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 SUPERFAMILY SSF53850 88 296 2.64E-26 T 23-10-2018 CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_14075 f87556a25e139e7f7aabb8064f82e6f0 297 Gene3D G3DSA:3.40.190.10 95 291 7.0E-46 T 23-10-2018 CDG60_16520 9625694949bcc6e33e4a938d3c85e780 1373 SUPERFAMILY SSF50998 821 1131 3.14E-6 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG60_16520 9625694949bcc6e33e4a938d3c85e780 1373 Pfam PF05567 Neisseria PilC beta-propeller domain 822 1119 1.1E-10 T 23-10-2018 IPR008707 PilC beta-propeller domain CDG60_05390 0f44a527d76831e319dfded0e1e8bcaa 588 Pfam PF09925 Predicted membrane protein (DUF2157) 13 119 4.3E-16 T 23-10-2018 IPR018677 Domain of unknown function DUF2157 CDG60_05390 0f44a527d76831e319dfded0e1e8bcaa 588 Pfam PF14351 Domain of unknown function (DUF4401) 289 585 8.5E-13 T 23-10-2018 IPR025513 Domain of unknown function DUF4401 CDG60_08950 1943ce27198062c970362d415a85ab9c 347 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 20 346 1.1E-140 T 23-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative CDG60_08950 1943ce27198062c970362d415a85ab9c 347 Gene3D G3DSA:3.40.190.10 143 327 1.4E-84 T 23-10-2018 CDG60_08950 1943ce27198062c970362d415a85ab9c 347 Pfam PF13343 Bacterial extracellular solute-binding protein 87 318 1.4E-30 T 23-10-2018 CDG60_08950 1943ce27198062c970362d415a85ab9c 347 SUPERFAMILY SSF53850 40 342 2.08E-63 T 23-10-2018 CDG60_08950 1943ce27198062c970362d415a85ab9c 347 PIRSF PIRSF002825 8 346 1.1E-84 T 23-10-2018 IPR026045 Ferric binding protein CDG60_08950 1943ce27198062c970362d415a85ab9c 347 Gene3D G3DSA:3.40.190.10 42 315 1.4E-84 T 23-10-2018 CDG60_16735 20fc835964adfb327e78738ca86eef39 359 Gene3D G3DSA:3.40.50.1970 1 171 1.6E-64 T 23-10-2018 CDG60_16735 20fc835964adfb327e78738ca86eef39 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 68.291 T 23-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG60_16735 20fc835964adfb327e78738ca86eef39 359 Gene3D G3DSA:1.20.1090.10 172 359 6.1E-69 T 23-10-2018 CDG60_16735 20fc835964adfb327e78738ca86eef39 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 352 1.4E-111 T 23-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG60_16735 20fc835964adfb327e78738ca86eef39 359 SUPERFAMILY SSF56796 4 354 1.09E-110 T 23-10-2018 CDG60_16735 20fc835964adfb327e78738ca86eef39 359 Pfam PF01761 3-dehydroquinate synthase 66 323 5.3E-104 T 23-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG60_16735 20fc835964adfb327e78738ca86eef39 359 PIRSF PIRSF001455 7 359 4.9E-101 T 23-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.2E-24 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 Gene3D G3DSA:1.20.5.1150 16 54 1.2E-20 T 23-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 Pfam PF01165 Ribosomal protein S21 3 55 4.1E-22 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 5.0E-10 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_07835 c349c11dd68e8fcbfad6a09541def5d4 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.252 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 PIRSF PIRSF000446 12 321 2.0E-103 T 23-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 Gene3D G3DSA:3.40.366.10 17 296 2.9E-91 T 23-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 SUPERFAMILY SSF52151 15 318 4.19E-69 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 Gene3D G3DSA:3.30.70.250 134 207 2.9E-91 T 23-10-2018 CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 18 312 1.2E-38 T 23-10-2018 IPR020801 Polyketide synthase, acyl transferase domain CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 Pfam PF00698 Acyl transferase domain 17 249 7.2E-34 T 23-10-2018 IPR014043 Acyl transferase CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 SUPERFAMILY SSF55048 139 203 4.05E-14 T 23-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDG60_04990 0fa56f3d9d0ab1689ada149093ae37cc 328 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 14 298 1.3E-97 T 23-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CDG60_02470 2d033ea6abb46e0c98e4959574076ccb 107 Gene3D G3DSA:2.60.120.10 1 107 7.3E-47 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_02470 2d033ea6abb46e0c98e4959574076ccb 107 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 11 106 25.197 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDG60_02470 2d033ea6abb46e0c98e4959574076ccb 107 Pfam PF06865 Protein of unknown function (DUF1255) 12 104 1.0E-32 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDG60_02470 2d033ea6abb46e0c98e4959574076ccb 107 SUPERFAMILY SSF51182 11 104 1.08E-30 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_13060 545792df21d9ca3ce335cb3492609358 411 Gene3D G3DSA:1.10.101.10 136 196 1.1E-10 T 23-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CDG60_13060 545792df21d9ca3ce335cb3492609358 411 Pfam PF03734 L,D-transpeptidase catalytic domain 279 406 6.7E-18 T 23-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDG60_13060 545792df21d9ca3ce335cb3492609358 411 Gene3D G3DSA:2.40.440.10 221 411 3.0E-43 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG60_13060 545792df21d9ca3ce335cb3492609358 411 SUPERFAMILY SSF141523 279 407 3.14E-27 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG60_13060 545792df21d9ca3ce335cb3492609358 411 SUPERFAMILY SSF47090 140 188 1.24E-11 T 23-10-2018 IPR036365 PGBD-like superfamily CDG60_13060 545792df21d9ca3ce335cb3492609358 411 Pfam PF01471 Putative peptidoglycan binding domain 142 187 4.6E-10 T 23-10-2018 IPR002477 Peptidoglycan binding-like CDG60_17035 f44f1d15efcbfe48431237f82db8882f 360 SMART SM00892 84 273 3.8E-40 T 23-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CDG60_17035 f44f1d15efcbfe48431237f82db8882f 360 Pfam PF01223 DNA/RNA non-specific endonuclease 76 268 2.5E-42 T 23-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CDG60_17035 f44f1d15efcbfe48431237f82db8882f 360 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 144 152 - T 23-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 CDG60_17035 f44f1d15efcbfe48431237f82db8882f 360 SUPERFAMILY SSF54060 59 280 1.24E-62 T 23-10-2018 CDG60_17035 f44f1d15efcbfe48431237f82db8882f 360 Gene3D G3DSA:3.40.570.10 73 280 1.1E-54 T 23-10-2018 CDG60_17035 f44f1d15efcbfe48431237f82db8882f 360 SMART SM00477 85 273 1.9E-36 T 23-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 Pfam PF01467 Cytidylyltransferase-like 7 135 1.4E-20 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 Gene3D G3DSA:3.40.50.620 1 163 1.5E-58 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 35.643 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 62 2.2E-17 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 3.5E-58 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 SUPERFAMILY SSF52374 3 158 1.39E-45 T 23-10-2018 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 2.8E-49 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 2.8E-49 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 2.8E-49 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 2.8E-49 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG60_05505 2a903f71e9f5894c18af60086e5f98cb 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 2.8E-49 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG60_07150 3efb8b22ff6385769976a14659f1416d 243 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 11 237 26.135 T 23-10-2018 IPR007451 High frequency lysogenization protein HflD CDG60_07150 3efb8b22ff6385769976a14659f1416d 243 Gene3D G3DSA:1.10.3890.10 13 241 8.2E-59 T 23-10-2018 IPR035932 HflD-like superfamily CDG60_07150 3efb8b22ff6385769976a14659f1416d 243 SUPERFAMILY SSF101322 13 236 1.96E-49 T 23-10-2018 IPR035932 HflD-like superfamily CDG60_07150 3efb8b22ff6385769976a14659f1416d 243 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 229 4.0E-104 T 23-10-2018 CDG60_07150 3efb8b22ff6385769976a14659f1416d 243 Pfam PF04356 Protein of unknown function (DUF489) 17 230 1.5E-52 T 23-10-2018 IPR007451 High frequency lysogenization protein HflD CDG60_02290 518c67f146fae891ba0c150a82aced7d 203 SUPERFAMILY SSF56925 21 203 6.28E-20 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_02290 518c67f146fae891ba0c150a82aced7d 203 Gene3D G3DSA:2.40.160.20 15 203 1.6E-40 T 23-10-2018 CDG60_02290 518c67f146fae891ba0c150a82aced7d 203 Pfam PF03922 OmpW family 19 203 2.2E-39 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG60_04600 83536b2a1e6240184fa3f5d2ec26262b 270 Pfam PF13614 AAA domain 3 167 1.1E-21 T 23-10-2018 IPR025669 AAA domain CDG60_04600 83536b2a1e6240184fa3f5d2ec26262b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 9.8E-106 T 23-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CDG60_04600 83536b2a1e6240184fa3f5d2ec26262b 270 SUPERFAMILY SSF52540 2 268 2.54E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04600 83536b2a1e6240184fa3f5d2ec26262b 270 Gene3D G3DSA:3.40.50.300 1 259 3.0E-72 T 23-10-2018 CDG60_04600 83536b2a1e6240184fa3f5d2ec26262b 270 PIRSF PIRSF003092 1 270 6.4E-89 T 23-10-2018 IPR025501 ATP binding protein MinD CDG60_01020 abe3192b08a9d37cd7c0198218c6c38d 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 1.2E-68 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG60_01020 abe3192b08a9d37cd7c0198218c6c38d 368 Gene3D G3DSA:1.10.287.470 92 164 3.8E-74 T 23-10-2018 CDG60_01020 abe3192b08a9d37cd7c0198218c6c38d 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 266 2.2E-17 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG60_01020 abe3192b08a9d37cd7c0198218c6c38d 368 Gene3D G3DSA:2.40.50.100 58 204 3.8E-74 T 23-10-2018 CDG60_01020 abe3192b08a9d37cd7c0198218c6c38d 368 Gene3D G3DSA:2.40.30.170 44 279 3.8E-74 T 23-10-2018 CDG60_01020 abe3192b08a9d37cd7c0198218c6c38d 368 Gene3D G3DSA:2.40.420.20 43 350 3.8E-74 T 23-10-2018 CDG60_01020 abe3192b08a9d37cd7c0198218c6c38d 368 SUPERFAMILY SSF111369 49 199 1.83E-21 T 23-10-2018 CDG60_06940 7db53f8173685130bd53178625efd441 343 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 41 203 1.0E-33 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG60_06940 7db53f8173685130bd53178625efd441 343 Hamap MF_00367 GTPase Era [era]. 38 340 36.489 T 23-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_06940 7db53f8173685130bd53178625efd441 343 Pfam PF01926 50S ribosome-binding GTPase 43 157 1.0E-25 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_06940 7db53f8173685130bd53178625efd441 343 TIGRFAM TIGR00436 era: GTP-binding protein Era 41 323 8.8E-95 T 23-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_06940 7db53f8173685130bd53178625efd441 343 SUPERFAMILY SSF54814 215 341 3.71E-38 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG60_06940 7db53f8173685130bd53178625efd441 343 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 43 63 5.2E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_06940 7db53f8173685130bd53178625efd441 343 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 111 129 5.2E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_06940 7db53f8173685130bd53178625efd441 343 Gene3D G3DSA:3.30.300.20 218 342 1.9E-40 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_06940 7db53f8173685130bd53178625efd441 343 Gene3D G3DSA:3.40.50.300 37 215 1.2E-51 T 23-10-2018 CDG60_06940 7db53f8173685130bd53178625efd441 343 Pfam PF07650 KH domain 272 328 2.1E-13 T 23-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_06940 7db53f8173685130bd53178625efd441 343 SUPERFAMILY SSF52540 36 252 1.27E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01590 52638e204a84b2662d18405946468a2c 139 Gene3D G3DSA:2.60.15.10 2 89 1.1E-29 T 23-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01590 52638e204a84b2662d18405946468a2c 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.5E-30 T 23-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01590 52638e204a84b2662d18405946468a2c 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 2.2E-40 T 23-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01590 52638e204a84b2662d18405946468a2c 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 89 2.0E-31 T 23-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01590 52638e204a84b2662d18405946468a2c 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.466 T 23-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01590 52638e204a84b2662d18405946468a2c 139 SUPERFAMILY SSF51344 3 85 1.83E-25 T 23-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01590 52638e204a84b2662d18405946468a2c 139 SUPERFAMILY SSF46604 88 135 8.37E-10 T 23-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01590 52638e204a84b2662d18405946468a2c 139 Gene3D G3DSA:1.20.5.440 90 132 7.8E-7 T 23-10-2018 CDG60_12985 792d16b385abef8085087c5989dc2fd7 269 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 261 5.6E-96 T 23-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CDG60_12985 792d16b385abef8085087c5989dc2fd7 269 Gene3D G3DSA:3.20.20.70 2 268 3.1E-97 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_12985 792d16b385abef8085087c5989dc2fd7 269 SUPERFAMILY SSF51366 16 263 9.42E-87 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_12985 792d16b385abef8085087c5989dc2fd7 269 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 263 35.163 T 23-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CDG60_12985 792d16b385abef8085087c5989dc2fd7 269 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 23-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CDG60_08290 99b4544d35ab035bb9d3ee2453b86a12 335 SUPERFAMILY SSF46689 290 334 1.21E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_08290 99b4544d35ab035bb9d3ee2453b86a12 335 Pfam PF12833 Helix-turn-helix domain 259 334 1.8E-13 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_08290 99b4544d35ab035bb9d3ee2453b86a12 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 19 204 2.2E-15 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_08290 99b4544d35ab035bb9d3ee2453b86a12 335 SMART SM00342 252 334 7.7E-14 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_08290 99b4544d35ab035bb9d3ee2453b86a12 335 Gene3D G3DSA:1.10.10.60 232 335 2.9E-19 T 23-10-2018 CDG60_08290 99b4544d35ab035bb9d3ee2453b86a12 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 9.7E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_08290 99b4544d35ab035bb9d3ee2453b86a12 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 9.7E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_01855 96a496c565db6b6afafc7d6a8d57d012 159 SUPERFAMILY SSF103642 137 158 7.85E-7 T 23-10-2018 CDG60_01855 96a496c565db6b6afafc7d6a8d57d012 159 SUPERFAMILY SSF54427 25 132 8.67E-32 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_01855 96a496c565db6b6afafc7d6a8d57d012 159 Gene3D G3DSA:3.10.450.50 1 159 1.3E-51 T 23-10-2018 CDG60_01855 96a496c565db6b6afafc7d6a8d57d012 159 Pfam PF02810 SEC-C motif 139 156 2.3E-7 T 23-10-2018 IPR004027 SEC-C motif CDG60_03560 53cd3e4f60265f389b1e720d2fa30e43 620 Gene3D G3DSA:3.40.50.300 337 581 3.6E-7 T 23-10-2018 CDG60_03560 53cd3e4f60265f389b1e720d2fa30e43 620 Gene3D G3DSA:3.40.50.300 59 272 1.8E-10 T 23-10-2018 CDG60_03560 53cd3e4f60265f389b1e720d2fa30e43 620 Pfam PF04851 Type III restriction enzyme, res subunit 52 256 1.9E-19 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG60_03560 53cd3e4f60265f389b1e720d2fa30e43 620 SUPERFAMILY SSF52540 82 538 4.54E-8 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_03560 53cd3e4f60265f389b1e720d2fa30e43 620 SUPERFAMILY SSF52540 11 273 2.66E-10 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_17270 3fa56986a3434a8cb589b3409671bc73 426 Gene3D G3DSA:3.40.50.2000 219 410 2.5E-62 T 23-10-2018 CDG60_17270 3fa56986a3434a8cb589b3409671bc73 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 215 9.9E-56 T 23-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CDG60_17270 3fa56986a3434a8cb589b3409671bc73 426 Pfam PF00534 Glycosyl transferases group 1 252 405 1.2E-6 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG60_17270 3fa56986a3434a8cb589b3409671bc73 426 Gene3D G3DSA:3.40.50.11720 32 213 2.0E-42 T 23-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CDG60_17270 3fa56986a3434a8cb589b3409671bc73 426 SUPERFAMILY SSF53756 53 423 1.67E-14 T 23-10-2018 CDG60_10030 9f4afcf47de2f74597df58d784e63eab 196 SUPERFAMILY SSF140804 49 194 1.07E-26 T 23-10-2018 IPR027405 YidB-like CDG60_10030 9f4afcf47de2f74597df58d784e63eab 196 Pfam PF06078 Bacterial protein of unknown function (DUF937) 12 170 6.2E-21 T 23-10-2018 IPR009282 Protein of unknown function DUF937 CDG60_10030 9f4afcf47de2f74597df58d784e63eab 196 Gene3D G3DSA:1.10.10.690 43 196 5.7E-28 T 23-10-2018 IPR027405 YidB-like CDG60_02445 767231e6e628891ff01834cbe3148a06 237 Pfam PF00106 short chain dehydrogenase 5 187 3.1E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_02445 767231e6e628891ff01834cbe3148a06 237 Gene3D G3DSA:3.40.50.720 2 231 1.5E-28 T 23-10-2018 CDG60_02445 767231e6e628891ff01834cbe3148a06 237 SUPERFAMILY SSF51735 2 219 5.62E-27 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_02445 767231e6e628891ff01834cbe3148a06 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_02445 767231e6e628891ff01834cbe3148a06 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_02445 767231e6e628891ff01834cbe3148a06 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 1.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_02445 767231e6e628891ff01834cbe3148a06 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_02020 9777280c1de57813db46e5c0843139bf 211 SMART SM00421 146 203 1.3E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.9E-7 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.9E-7 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.9E-7 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 Pfam PF00072 Response regulator receiver domain 4 116 1.3E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 SUPERFAMILY SSF52172 2 132 2.99E-34 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_02020 9777280c1de57813db46e5c0843139bf 211 SMART SM00448 2 115 9.6E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 Gene3D G3DSA:3.40.50.12740 2 209 6.4E-61 T 23-10-2018 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 1.2E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG60_02020 9777280c1de57813db46e5c0843139bf 211 SUPERFAMILY SSF46894 137 209 8.84E-20 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 3.7E-20 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.7E-20 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.7E-20 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 23-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 Pfam PF00255 Glutathione peroxidase 4 110 3.4E-40 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 PIRSF PIRSF000303 1 160 2.4E-69 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 Gene3D G3DSA:3.40.30.10 1 160 1.1E-71 T 23-10-2018 CDG60_10780 6b18f7b3d0f97f7d7fe2a639a83fb275 160 SUPERFAMILY SSF52833 2 158 6.29E-63 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_04200 f04513ca58be3a05fe69b73fc43c1aa0 282 PIRSF PIRSF000903 7 281 6.1E-93 T 23-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CDG60_04200 f04513ca58be3a05fe69b73fc43c1aa0 282 SUPERFAMILY SSF56300 10 270 5.54E-46 T 23-10-2018 CDG60_04200 f04513ca58be3a05fe69b73fc43c1aa0 282 Pfam PF00149 Calcineurin-like phosphoesterase 11 164 1.6E-13 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG60_04200 f04513ca58be3a05fe69b73fc43c1aa0 282 Gene3D G3DSA:3.60.21.10 9 281 4.7E-65 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG60_04200 f04513ca58be3a05fe69b73fc43c1aa0 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 9 277 8.4E-82 T 23-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CDG60_11330 156f0c5ee04cd610f5bb3491397698bc 176 SMART SM00903 24 167 2.8E-57 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_11330 156f0c5ee04cd610f5bb3491397698bc 176 Pfam PF01613 Flavin reductase like domain 25 166 2.3E-32 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_11330 156f0c5ee04cd610f5bb3491397698bc 176 Gene3D G3DSA:2.30.110.10 14 174 1.9E-45 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG60_11330 156f0c5ee04cd610f5bb3491397698bc 176 SUPERFAMILY SSF50475 16 170 4.56E-46 T 23-10-2018 CDG60_06800 35a671833ff200bc765e9e774d0e0ebc 153 PIRSF PIRSF000239 4 153 2.3E-23 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_06800 35a671833ff200bc765e9e774d0e0ebc 153 Pfam PF00578 AhpC/TSA family 12 128 1.7E-25 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_06800 35a671833ff200bc765e9e774d0e0ebc 153 SUPERFAMILY SSF52833 7 151 1.98E-38 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_06800 35a671833ff200bc765e9e774d0e0ebc 153 Gene3D G3DSA:3.40.30.10 5 152 6.4E-35 T 23-10-2018 CDG60_13510 fdabacdd39a42a9ba7a2fc362ee9b23b 435 Gene3D G3DSA:2.40.160.10 87 435 2.1E-9 T 23-10-2018 IPR023614 Porin domain superfamily CDG60_13510 fdabacdd39a42a9ba7a2fc362ee9b23b 435 SUPERFAMILY SSF56935 90 435 2.2E-27 T 23-10-2018 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.656 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 1.7E-51 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 23-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.9E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.9E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.9E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.9E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.9E-24 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 Gene3D G3DSA:1.10.520.20 2 107 1.8E-30 T 23-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 5.9E-43 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_01570 dfea1d2159716336c6fcbaeedc9a68c8 178 SUPERFAMILY SSF47928 3 106 1.11E-24 T 23-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG60_00545 9c7662eaaac8238bdca3066e73ea9536 341 Gene3D G3DSA:3.30.420.10 172 334 1.7E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_00545 9c7662eaaac8238bdca3066e73ea9536 341 SUPERFAMILY SSF53098 180 326 8.35E-28 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_00545 9c7662eaaac8238bdca3066e73ea9536 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_00545 9c7662eaaac8238bdca3066e73ea9536 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_08600 9c7662eaaac8238bdca3066e73ea9536 341 Gene3D G3DSA:3.30.420.10 172 334 1.7E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_08600 9c7662eaaac8238bdca3066e73ea9536 341 SUPERFAMILY SSF53098 180 326 8.35E-28 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_08600 9c7662eaaac8238bdca3066e73ea9536 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_08600 9c7662eaaac8238bdca3066e73ea9536 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_06655 795ec31214e7e166f58d998eea91e30f 473 Gene3D G3DSA:3.30.1150.10 373 470 2.3E-15 T 23-10-2018 CDG60_06655 795ec31214e7e166f58d998eea91e30f 473 SUPERFAMILY SSF74653 393 466 3.92E-11 T 23-10-2018 CDG60_06655 795ec31214e7e166f58d998eea91e30f 473 Pfam PF13103 TonB C terminal 394 454 1.1E-7 T 23-10-2018 CDG60_06655 795ec31214e7e166f58d998eea91e30f 473 TIGRFAM TIGR02794 tolA_full: protein TolA 15 241 6.0E-18 T 23-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CDG60_06655 795ec31214e7e166f58d998eea91e30f 473 TIGRFAM TIGR02794 tolA_full: protein TolA 286 467 2.5E-26 T 23-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CDG60_12570 d904bf8d5b063015f97b9488832d0c11 255 Gene3D G3DSA:3.30.1330.60 122 255 3.1E-35 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_12570 d904bf8d5b063015f97b9488832d0c11 255 Gene3D G3DSA:3.40.1520.20 23 121 6.1E-5 T 23-10-2018 CDG60_12570 d904bf8d5b063015f97b9488832d0c11 255 Pfam PF00691 OmpA family 154 248 2.6E-22 T 23-10-2018 IPR006665 OmpA-like domain CDG60_12570 d904bf8d5b063015f97b9488832d0c11 255 SUPERFAMILY SSF103088 147 253 7.98E-31 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_12570 d904bf8d5b063015f97b9488832d0c11 255 PRINTS PR01021 OMPA domain signature 154 176 2.5E-8 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_12570 d904bf8d5b063015f97b9488832d0c11 255 PRINTS PR01021 OMPA domain signature 184 199 2.5E-8 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_12570 d904bf8d5b063015f97b9488832d0c11 255 PRINTS PR01021 OMPA domain signature 199 215 2.5E-8 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_05150 a801087619dd12a1b5d444caebb10b14 395 Pfam PF00909 Ammonium Transporter Family 8 386 3.4E-85 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDG60_05150 a801087619dd12a1b5d444caebb10b14 395 Gene3D G3DSA:1.10.3430.10 1 394 3.3E-98 T 23-10-2018 IPR029020 Ammonium/urea transporter CDG60_05150 a801087619dd12a1b5d444caebb10b14 395 ProSitePatterns PS01219 Ammonium transporters signature. 152 177 - T 23-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CDG60_05150 a801087619dd12a1b5d444caebb10b14 395 SUPERFAMILY SSF111352 2 370 1.96E-94 T 23-10-2018 CDG60_00550 41ea894f695dd4430ef21990e2c39036 259 PIRSF PIRSF000706 1 259 3.6E-77 T 23-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 CDG60_00550 41ea894f695dd4430ef21990e2c39036 259 Gene3D G3DSA:3.30.200.20 1 88 2.1E-24 T 23-10-2018 CDG60_00550 41ea894f695dd4430ef21990e2c39036 259 Pfam PF01636 Phosphotransferase enzyme family 27 242 1.1E-14 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG60_00550 41ea894f695dd4430ef21990e2c39036 259 SUPERFAMILY SSF56112 2 248 5.32E-36 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_00550 41ea894f695dd4430ef21990e2c39036 259 Gene3D G3DSA:3.90.1200.10 95 259 5.6E-32 T 23-10-2018 CDG60_13240 3115a2816fe38dad42ec9d254df1b667 229 SMART SM00382 34 225 6.7E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_13240 3115a2816fe38dad42ec9d254df1b667 229 Pfam PF00005 ABC transporter 26 174 4.9E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_13240 3115a2816fe38dad42ec9d254df1b667 229 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_13240 3115a2816fe38dad42ec9d254df1b667 229 Gene3D G3DSA:3.40.50.300 3 229 7.3E-62 T 23-10-2018 CDG60_13240 3115a2816fe38dad42ec9d254df1b667 229 SUPERFAMILY SSF52540 5 227 4.15E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 Gene3D G3DSA:3.30.70.1050 1 114 1.2E-34 T 23-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 236 3.5E-16 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 SUPERFAMILY SSF54534 102 239 1.59E-35 T 23-10-2018 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 PIRSF PIRSF003095 1 441 1.7E-126 T 23-10-2018 IPR005215 Trigger factor GO:0015031 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 Gene3D G3DSA:3.10.50.40 149 245 2.4E-95 T 23-10-2018 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 8.1E-41 T 23-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 SUPERFAMILY SSF109998 247 436 1.22E-43 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 SUPERFAMILY SSF102735 1 128 9.81E-37 T 23-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 419 5.4E-37 T 23-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 Gene3D G3DSA:1.10.3120.10 115 424 2.4E-95 T 23-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 Hamap MF_00303 Trigger factor [tig]. 1 425 21.742 T 23-10-2018 IPR005215 Trigger factor GO:0015031 CDG60_15595 bc0790959917b0fe6fe36dee6bf7ed8c 444 TIGRFAM TIGR00115 tig: trigger factor 12 419 5.5E-141 T 23-10-2018 IPR005215 Trigger factor GO:0015031 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 SUPERFAMILY SSF50475 20 218 1.3E-63 T 23-10-2018 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 Gene3D G3DSA:2.30.110.10 4 218 4.0E-80 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 41 123 1.2E-26 T 23-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 23-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 3.2E-20 T 23-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 14 218 37.055 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 218 1.6E-79 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG60_17310 a9cadf6367750e94c7019b615acd993b 218 PIRSF PIRSF000190 1 218 8.9E-79 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG60_15310 1ac2a768b76c7c9cc158c6494eaaefb1 125 SUPERFAMILY SSF47175 25 122 2.47E-15 T 23-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CDG60_15310 1ac2a768b76c7c9cc158c6494eaaefb1 125 Gene3D G3DSA:1.20.120.10 24 123 9.8E-25 T 23-10-2018 CDG60_15310 1ac2a768b76c7c9cc158c6494eaaefb1 125 Pfam PF07361 Cytochrome b562 26 122 4.1E-16 T 23-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CDG60_09725 d177299c30960ff5865ec43031f58379 475 Pfam PF13264 Domain of unknown function (DUF4055) 260 394 1.3E-28 T 23-10-2018 IPR025129 Domain of unknown function DUF4055 CDG60_13405 43ca27fdb0b08c449c882cab7838c45c 618 SUPERFAMILY SSF55073 455 614 2.59E-32 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_13405 43ca27fdb0b08c449c882cab7838c45c 618 SMART SM00267 439 617 1.7E-41 T 23-10-2018 IPR000160 GGDEF domain CDG60_13405 43ca27fdb0b08c449c882cab7838c45c 618 Pfam PF00990 Diguanylate cyclase, GGDEF domain 450 612 1.4E-33 T 23-10-2018 IPR000160 GGDEF domain CDG60_13405 43ca27fdb0b08c449c882cab7838c45c 618 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 615 2.2E-36 T 23-10-2018 IPR000160 GGDEF domain CDG60_13405 43ca27fdb0b08c449c882cab7838c45c 618 Gene3D G3DSA:3.30.70.270 436 616 1.0E-39 T 23-10-2018 CDG60_10710 b81ff5d4186684c518818db9c11f4cc4 187 Pfam PF01553 Acyltransferase 26 139 5.1E-12 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_10710 b81ff5d4186684c518818db9c11f4cc4 187 SMART SM00563 30 146 1.4E-16 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_10710 b81ff5d4186684c518818db9c11f4cc4 187 SUPERFAMILY SSF69593 24 143 2.88E-15 T 23-10-2018 CDG60_17425 d30a4e801a55c00afe42deaf5fa3fdf9 145 Gene3D G3DSA:2.40.128.520 23 145 2.2E-17 T 23-10-2018 CDG60_17425 d30a4e801a55c00afe42deaf5fa3fdf9 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 2.2E-25 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_01055 b126f87e030c639443029612b69570ec 730 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 514 715 4.6E-48 T 23-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CDG60_01055 b126f87e030c639443029612b69570ec 730 Pfam PF13807 G-rich domain on putative tyrosine kinase 377 458 1.7E-30 T 23-10-2018 IPR032807 Tyrosine kinase, G-rich domain CDG60_01055 b126f87e030c639443029612b69570ec 730 Gene3D G3DSA:3.40.50.300 452 727 1.4E-75 T 23-10-2018 CDG60_01055 b126f87e030c639443029612b69570ec 730 Pfam PF13614 AAA domain 544 691 4.6E-14 T 23-10-2018 IPR025669 AAA domain CDG60_01055 b126f87e030c639443029612b69570ec 730 Pfam PF02706 Chain length determinant protein 9 99 2.6E-20 T 23-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CDG60_01055 b126f87e030c639443029612b69570ec 730 SUPERFAMILY SSF52540 532 713 5.63E-37 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09160 647b715fdffa8ec37af28a1e0a870bc3 323 Pfam PF00296 Luciferase-like monooxygenase 27 238 3.5E-38 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG60_09160 647b715fdffa8ec37af28a1e0a870bc3 323 SUPERFAMILY SSF51679 22 321 2.88E-56 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_09160 647b715fdffa8ec37af28a1e0a870bc3 323 Gene3D G3DSA:3.20.20.30 4 323 2.3E-92 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_09160 647b715fdffa8ec37af28a1e0a870bc3 323 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 15 320 6.6E-117 T 23-10-2018 IPR020020 Luciferase-type oxidoreductase CDG60_17605 44bc8e237f320ec1403bf7941ae65f40 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 399 47.698 T 23-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG60_17605 44bc8e237f320ec1403bf7941ae65f40 401 SUPERFAMILY SSF51690 121 396 1.77E-89 T 23-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG60_17605 44bc8e237f320ec1403bf7941ae65f40 401 PIRSF PIRSF000484 1 384 3.5E-78 T 23-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CDG60_17605 44bc8e237f320ec1403bf7941ae65f40 401 SUPERFAMILY SSF54675 2 139 1.88E-41 T 23-10-2018 CDG60_17605 44bc8e237f320ec1403bf7941ae65f40 401 Gene3D G3DSA:3.20.140.10 1 401 1.1E-148 T 23-10-2018 CDG60_17605 44bc8e237f320ec1403bf7941ae65f40 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 397 2.6E-169 T 23-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG60_17605 44bc8e237f320ec1403bf7941ae65f40 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 397 1.2E-81 T 23-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 624 21.653 T 23-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 Gene3D G3DSA:3.30.9.10 355 560 6.8E-76 T 23-10-2018 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 Gene3D G3DSA:3.50.50.60 278 621 6.8E-76 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 277 622 4.0E-72 T 23-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 SUPERFAMILY SSF51971 274 604 2.59E-20 T 23-10-2018 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 PRINTS PR00419 Adrenodoxin reductase family signature 277 299 3.5E-5 T 23-10-2018 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 PRINTS PR00419 Adrenodoxin reductase family signature 300 313 3.5E-5 T 23-10-2018 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 Pfam PF01266 FAD dependent oxidoreductase 278 600 6.5E-28 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 SUPERFAMILY SSF54373 469 552 3.01E-5 T 23-10-2018 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 240 2.1E-36 T 23-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDG60_15350 1a21d68ee68bf2d5871b694c0a868b19 637 Gene3D G3DSA:3.40.50.150 10 251 7.4E-89 T 23-10-2018 CDG60_04855 90eff21a08034a7fe4a3bc41d53e127a 269 Pfam PF01925 Sulfite exporter TauE/SafE 7 259 3.1E-49 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_05235 1adeb86b6c5cba59615ceb118062a428 117 Pfam PF01906 Putative heavy-metal-binding 1 103 9.1E-39 T 23-10-2018 IPR002765 Uncharacterised protein family UPF0145 CDG60_05235 1adeb86b6c5cba59615ceb118062a428 117 SUPERFAMILY SSF117782 1 105 3.66E-37 T 23-10-2018 IPR035439 UPF0145 domain superfamily CDG60_05235 1adeb86b6c5cba59615ceb118062a428 117 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.88 T 23-10-2018 IPR002765 Uncharacterised protein family UPF0145 CDG60_05235 1adeb86b6c5cba59615ceb118062a428 117 Gene3D G3DSA:3.30.110.70 2 105 6.6E-33 T 23-10-2018 CDG60_04495 c6ac50196cd28503fbfc2207e0166ab8 120 Gene3D G3DSA:3.30.1330.40 1 120 1.0E-35 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_04495 c6ac50196cd28503fbfc2207e0166ab8 120 Pfam PF01042 Endoribonuclease L-PSP 10 118 2.5E-21 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG60_04495 c6ac50196cd28503fbfc2207e0166ab8 120 SUPERFAMILY SSF55298 12 118 7.7E-28 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_01930 6f8bcb3ecc736ffff995466638dbee73 75 Pfam PF04380 Membrane fusogenic activity 4 68 6.9E-14 T 23-10-2018 IPR007475 Membrane fusogenic activity CDG60_05945 64511ea511d5073fc1b43a48f6c802eb 394 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 355 378 4.9E-4 T 23-10-2018 IPR030934 Intein C-terminal splicing region CDG60_05945 64511ea511d5073fc1b43a48f6c802eb 394 SMART SM00306 146 240 0.0041 T 23-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_05945 64511ea511d5073fc1b43a48f6c802eb 394 Gene3D G3DSA:2.170.16.10 310 378 2.1E-6 T 23-10-2018 CDG60_05945 64511ea511d5073fc1b43a48f6c802eb 394 Gene3D G3DSA:2.170.16.10 145 245 1.6E-19 T 23-10-2018 CDG60_05945 64511ea511d5073fc1b43a48f6c802eb 394 SUPERFAMILY SSF51294 147 377 1.83E-15 T 23-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_00965 9adf8354d37623a4d65aa7ec72750b6e 119 Pfam PF11776 Nickel/cobalt transporter regulator 66 116 2.5E-14 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG60_00965 9adf8354d37623a4d65aa7ec72750b6e 119 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 63 117 1.0E-10 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG60_00965 9adf8354d37623a4d65aa7ec72750b6e 119 Gene3D G3DSA:3.10.450.160 43 119 6.1E-13 T 23-10-2018 CDG60_01440 48b131f5e7574591fc236997a92d6c77 315 Pfam PF05726 Pirin C-terminal cupin domain 190 287 1.0E-18 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDG60_01440 48b131f5e7574591fc236997a92d6c77 315 PIRSF PIRSF006232 19 300 2.1E-73 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG60_01440 48b131f5e7574591fc236997a92d6c77 315 Gene3D G3DSA:2.60.120.10 19 263 4.0E-61 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_01440 48b131f5e7574591fc236997a92d6c77 315 SUPERFAMILY SSF51182 34 300 6.23E-68 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_01440 48b131f5e7574591fc236997a92d6c77 315 Pfam PF02678 Pirin 40 138 1.1E-28 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG60_11285 a53d35ea0472fa211c14a4da8a7f9516 401 SUPERFAMILY SSF55073 240 399 4.24E-46 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_11285 a53d35ea0472fa211c14a4da8a7f9516 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 235 396 1.2E-49 T 23-10-2018 IPR000160 GGDEF domain CDG60_11285 a53d35ea0472fa211c14a4da8a7f9516 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 231 399 2.4E-49 T 23-10-2018 IPR000160 GGDEF domain CDG60_11285 a53d35ea0472fa211c14a4da8a7f9516 401 SMART SM00267 224 400 1.1E-64 T 23-10-2018 IPR000160 GGDEF domain CDG60_11285 a53d35ea0472fa211c14a4da8a7f9516 401 Gene3D G3DSA:3.30.70.270 220 398 4.2E-54 T 23-10-2018 CDG60_07435 55551e8050db1b49c69a5ac1bb74a5e3 126 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 114 2.8E-24 T 23-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG60_07435 55551e8050db1b49c69a5ac1bb74a5e3 126 SUPERFAMILY SSF55620 1 117 1.11E-28 T 23-10-2018 CDG60_07435 55551e8050db1b49c69a5ac1bb74a5e3 126 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 1.7E-26 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG60_07435 55551e8050db1b49c69a5ac1bb74a5e3 126 SMART SM00905 4 115 3.5E-34 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG60_07435 55551e8050db1b49c69a5ac1bb74a5e3 126 Pfam PF02152 Dihydroneopterin aldolase 4 113 4.3E-26 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG60_07435 55551e8050db1b49c69a5ac1bb74a5e3 126 Gene3D G3DSA:3.30.1130.10 1 118 3.3E-32 T 23-10-2018 CDG60_08110 f35755f1ace4aa36eb8f43bbf3d744f3 296 Gene3D G3DSA:3.40.190.10 164 263 2.8E-65 T 23-10-2018 CDG60_08110 f35755f1ace4aa36eb8f43bbf3d744f3 296 SUPERFAMILY SSF53850 90 294 9.93E-45 T 23-10-2018 CDG60_08110 f35755f1ace4aa36eb8f43bbf3d744f3 296 Pfam PF03466 LysR substrate binding domain 90 292 1.4E-44 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_08110 f35755f1ace4aa36eb8f43bbf3d744f3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.4E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08110 f35755f1ace4aa36eb8f43bbf3d744f3 296 SUPERFAMILY SSF46785 5 113 4.33E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08110 f35755f1ace4aa36eb8f43bbf3d744f3 296 Gene3D G3DSA:3.40.190.10 92 290 2.8E-65 T 23-10-2018 CDG60_08110 f35755f1ace4aa36eb8f43bbf3d744f3 296 Gene3D G3DSA:1.10.10.10 4 90 9.4E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 427 49.539 T 23-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 SUPERFAMILY SSF53383 6 427 5.97E-133 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 Gene3D G3DSA:3.40.640.10 63 333 4.5E-166 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 282 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 Gene3D G3DSA:3.90.1150.10 12 417 4.5E-166 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 Pfam PF00202 Aminotransferase class-III 28 423 1.5E-130 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 424 1.4E-181 T 23-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 PIRSF PIRSF000521 178 427 1.7E-22 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_04915 d29588d356dd8825d77fa1e06176ae60 435 PIRSF PIRSF000521 23 146 6.8E-9 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG60_17705 019bf2e726c96ebdf64a69bd0dfac7ba 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.1E-8 T 23-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CDG60_17705 019bf2e726c96ebdf64a69bd0dfac7ba 52 PIRSF PIRSF036466 1 52 1.6E-17 T 23-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CDG60_17705 019bf2e726c96ebdf64a69bd0dfac7ba 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 17.134 T 23-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 Gene3D G3DSA:3.40.50.12160 5 125 5.1E-28 T 23-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 Gene3D G3DSA:3.80.30.20 135 376 6.8E-72 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 SMART SM00729 137 362 6.5E-52 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 439 5.9E-104 T 23-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 Pfam PF00919 Uncharacterized protein family UPF0004 5 93 1.8E-20 T 23-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 Pfam PF04055 Radical SAM superfamily 143 320 1.7E-28 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 1.0E-181 T 23-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 441 60.992 T 23-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 SUPERFAMILY SSF102114 122 367 2.88E-52 T 23-10-2018 CDG60_10245 7c7ce78fbfe4d8d216d1513f3d7282b6 447 Gene3D G3DSA:2.40.50.140 377 446 2.2E-19 T 23-10-2018 CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 SMART SM00382 335 477 0.0099 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 SUPERFAMILY SSF52540 193 582 3.18E-96 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 63 162 4.8E-12 T 23-10-2018 IPR007831 General secretory system II, protein E, N-terminal CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 Gene3D G3DSA:3.40.50.300 311 583 6.1E-104 T 23-10-2018 CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 Pfam PF00437 Type II/IV secretion system protein 214 474 3.8E-77 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 Gene3D G3DSA:3.30.450.90 170 307 5.9E-42 T 23-10-2018 CDG60_11980 1da09651ec3e9b4eaa989609beb10efb 585 SUPERFAMILY SSF160246 16 160 3.66E-7 T 23-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG60_15800 09b299141c1ef3e56a3f000cc75e9ba3 301 Pfam PF00892 EamA-like transporter family 154 285 5.4E-19 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_15800 09b299141c1ef3e56a3f000cc75e9ba3 301 Pfam PF00892 EamA-like transporter family 10 138 7.1E-22 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_15800 09b299141c1ef3e56a3f000cc75e9ba3 301 SUPERFAMILY SSF103481 191 289 1.7E-12 T 23-10-2018 CDG60_15800 09b299141c1ef3e56a3f000cc75e9ba3 301 SUPERFAMILY SSF103481 46 141 8.24E-12 T 23-10-2018 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 2.0E-5 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 2.0E-5 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 571 683 5.1E-7 T 23-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 Gene3D G3DSA:3.40.50.300 12 176 1.5E-102 T 23-10-2018 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 Pfam PF13177 DNA polymerase III, delta subunit 19 177 1.5E-39 T 23-10-2018 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 SMART SM00382 36 177 6.9E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 355 7.2E-134 T 23-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 Gene3D G3DSA:1.20.272.10 241 361 4.8E-31 T 23-10-2018 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 SUPERFAMILY SSF52540 33 222 1.28E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 SUPERFAMILY SSF48019 242 363 1.87E-25 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 365 1.8E-26 T 23-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CDG60_10835 99d44d9dabe3e43b6ec80dc33c6a6a0b 688 Gene3D G3DSA:1.10.8.60 7 239 1.5E-102 T 23-10-2018 CDG60_06890 552d8fdb5a566e6c88a013f250baf974 137 Gene3D G3DSA:3.10.129.10 4 137 4.5E-49 T 23-10-2018 CDG60_06890 552d8fdb5a566e6c88a013f250baf974 137 Pfam PF03061 Thioesterase superfamily 47 118 3.8E-8 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG60_06890 552d8fdb5a566e6c88a013f250baf974 137 SUPERFAMILY SSF54637 9 133 1.85E-23 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_12800 d297eb9df5422f42ecd25ab25de795bb 448 TIGRFAM TIGR00784 citMHS: citrate transporter 1 441 1.6E-173 T 23-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 CDG60_12800 d297eb9df5422f42ecd25ab25de795bb 448 Pfam PF03600 Citrate transporter 13 389 6.1E-51 T 23-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CDG60_05705 0addbe41e67f62a8a6e8e4ca65244de9 322 Gene3D G3DSA:3.40.50.1820 31 322 4.4E-82 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_05705 0addbe41e67f62a8a6e8e4ca65244de9 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 263 277 1.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_05705 0addbe41e67f62a8a6e8e4ca65244de9 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 111 1.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_05705 0addbe41e67f62a8a6e8e4ca65244de9 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 1.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_05705 0addbe41e67f62a8a6e8e4ca65244de9 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 156 169 1.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_05705 0addbe41e67f62a8a6e8e4ca65244de9 322 SUPERFAMILY SSF53474 45 320 2.57E-50 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_05705 0addbe41e67f62a8a6e8e4ca65244de9 322 Pfam PF00561 alpha/beta hydrolase fold 71 305 6.0E-23 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_17115 e208cd3e6cfebba97ff936ead099860d 194 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 34.685 T 23-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CDG60_17115 e208cd3e6cfebba97ff936ead099860d 194 Gene3D G3DSA:2.40.50.140 1 126 2.0E-44 T 23-10-2018 CDG60_17115 e208cd3e6cfebba97ff936ead099860d 194 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 194 5.4E-53 T 23-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CDG60_17115 e208cd3e6cfebba97ff936ead099860d 194 Pfam PF00436 Single-strand binding protein family 4 108 5.4E-39 T 23-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CDG60_17115 e208cd3e6cfebba97ff936ead099860d 194 SUPERFAMILY SSF50249 2 194 2.67E-54 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_08050 cdcd13fdf4704486dfd2dbf231ec8e74 236 Gene3D G3DSA:3.30.1600.10 18 154 5.8E-64 T 23-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily CDG60_08050 cdcd13fdf4704486dfd2dbf231ec8e74 236 Gene3D G3DSA:3.40.50.1220 5 201 5.8E-64 T 23-10-2018 CDG60_08050 cdcd13fdf4704486dfd2dbf231ec8e74 236 Pfam PF02146 Sir2 family 9 182 2.8E-47 T 23-10-2018 IPR003000 Sirtuin family GO:0070403 CDG60_08050 cdcd13fdf4704486dfd2dbf231ec8e74 236 SUPERFAMILY SSF52467 2 230 8.94E-66 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG60_08050 cdcd13fdf4704486dfd2dbf231ec8e74 236 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 3 228 48.953 T 23-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CDG60_11705 d12659ed0d2198c29bdd33ac12dd70a9 127 Pfam PF06127 Protein of unknown function (DUF962) 22 114 9.9E-30 T 23-10-2018 IPR009305 Protein of unknown function DUF962 CDG60_07685 9800dc18334071d11ccb7521f45f8a22 366 Pfam PF03922 OmpW family 206 366 1.7E-12 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG60_07685 9800dc18334071d11ccb7521f45f8a22 366 SUPERFAMILY SSF56925 136 366 6.54E-17 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_10855 1f2646569034e5c4b296644b159f3563 508 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 93 507 7.6E-116 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_10855 1f2646569034e5c4b296644b159f3563 508 Gene3D G3DSA:3.40.47.10 81 508 5.8E-101 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_10855 1f2646569034e5c4b296644b159f3563 508 Pfam PF00108 Thiolase, N-terminal domain 91 358 3.3E-48 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_10855 1f2646569034e5c4b296644b159f3563 508 Pfam PF02803 Thiolase, C-terminal domain 385 508 6.7E-30 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_10855 1f2646569034e5c4b296644b159f3563 508 SUPERFAMILY SSF53901 91 364 5.76E-56 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_10855 1f2646569034e5c4b296644b159f3563 508 SUPERFAMILY SSF53901 364 508 2.47E-28 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 SUPERFAMILY SSF90123 141 458 3.53E-59 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 Gene3D G3DSA:1.20.1560.10 146 457 9.5E-61 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 Pfam PF00005 ABC transporter 496 640 5.1E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 Gene3D G3DSA:3.40.50.300 467 711 1.8E-67 T 23-10-2018 CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 Pfam PF00664 ABC transporter transmembrane region 161 426 8.0E-30 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 8 703 2.9E-260 T 23-10-2018 IPR017750 ATPase, type I secretion system CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 SMART SM00382 500 686 6.5E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 Gene3D G3DSA:3.90.70.10 4 127 1.0E-16 T 23-10-2018 CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 SUPERFAMILY SSF52540 464 701 1.04E-61 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11390 76d8f6bdd482b3220dc102cea9adac6c 712 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_13605 adfe0ee59bcd01499048ec914a86762f 46 Pfam PF08085 Entericidin EcnA/B family 19 39 4.7E-9 T 23-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CDG60_10655 29b7a14846c633543db64ef84fd53d20 90 SUPERFAMILY SSF54975 1 88 8.07E-22 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDG60_10655 29b7a14846c633543db64ef84fd53d20 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 23-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDG60_10655 29b7a14846c633543db64ef84fd53d20 90 Pfam PF00708 Acylphosphatase 4 87 9.2E-23 T 23-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDG60_10655 29b7a14846c633543db64ef84fd53d20 90 Gene3D G3DSA:3.30.70.100 1 89 5.4E-25 T 23-10-2018 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 432 1.1E-117 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 SUPERFAMILY SSF53901 294 433 1.08E-30 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 ProSitePatterns PS00737 Thiolases signature 2. 380 396 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 PIRSF PIRSF000429 8 434 1.0E-113 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 Pfam PF02803 Thiolase, C-terminal domain 294 432 7.4E-35 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 93 111 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 Pfam PF00108 Thiolase, N-terminal domain 14 286 7.6E-57 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 SUPERFAMILY SSF53901 12 289 9.27E-57 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 Gene3D G3DSA:3.40.47.10 5 433 8.6E-109 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG60_11040 c416b67a4bce5c51b3ac1d0103777e5c 434 ProSitePatterns PS00099 Thiolases active site. 415 428 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG60_04195 6372b237c98b4018442f3c3da48224be 270 SUPERFAMILY SSF53335 10 268 2.44E-75 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_04195 6372b237c98b4018442f3c3da48224be 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 14 266 1.7E-64 T 23-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CDG60_04195 6372b237c98b4018442f3c3da48224be 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 269 56.857 T 23-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CDG60_04195 6372b237c98b4018442f3c3da48224be 270 Gene3D G3DSA:3.40.50.150 8 203 1.5E-67 T 23-10-2018 CDG60_04195 6372b237c98b4018442f3c3da48224be 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 267 2.2E-85 T 23-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CDG60_04195 6372b237c98b4018442f3c3da48224be 270 SMART SM00650 30 202 1.3E-81 T 23-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CDG60_04195 6372b237c98b4018442f3c3da48224be 270 Gene3D G3DSA:1.10.8.100 207 270 1.4E-20 T 23-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CDG60_04195 6372b237c98b4018442f3c3da48224be 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 23-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CDG60_16080 38f7ccbc8e9c2a4e573f565bd61ac5a5 249 SUPERFAMILY SSF51735 13 229 2.5E-24 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_16080 38f7ccbc8e9c2a4e573f565bd61ac5a5 249 Gene3D G3DSA:3.40.50.720 1 245 8.0E-50 T 23-10-2018 CDG60_16080 38f7ccbc8e9c2a4e573f565bd61ac5a5 249 Pfam PF13460 NAD(P)H-binding 9 198 9.6E-11 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG60_03110 881d4a30736583dda725559b3d09a7bc 160 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG60_03110 881d4a30736583dda725559b3d09a7bc 160 Pfam PF00293 NUDIX domain 7 145 1.3E-24 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_03110 881d4a30736583dda725559b3d09a7bc 160 SUPERFAMILY SSF55811 7 154 1.34E-30 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_03110 881d4a30736583dda725559b3d09a7bc 160 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.1E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_03110 881d4a30736583dda725559b3d09a7bc 160 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.1E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_03110 881d4a30736583dda725559b3d09a7bc 160 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.112 T 23-10-2018 IPR022927 RNA pyrophosphohydrolase RppH CDG60_03110 881d4a30736583dda725559b3d09a7bc 160 Gene3D G3DSA:3.90.79.10 1 155 8.9E-45 T 23-10-2018 CDG60_13810 dbe243ee36a800718091b7eae533ec3b 97 Gene3D G3DSA:2.40.50.140 1 88 5.3E-15 T 23-10-2018 CDG60_13810 dbe243ee36a800718091b7eae533ec3b 97 SUPERFAMILY SSF50249 5 67 8.57E-12 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_13810 dbe243ee36a800718091b7eae533ec3b 97 SMART SM00357 7 68 3.1E-5 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG60_13810 dbe243ee36a800718091b7eae533ec3b 97 Pfam PF00313 'Cold-shock' DNA-binding domain 8 66 2.8E-10 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_13810 dbe243ee36a800718091b7eae533ec3b 97 PIRSF PIRSF002599 1 91 8.0E-12 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 2.9E-14 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 Pfam PF00416 Ribosomal protein S13/S18 65 108 9.7E-17 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 PIRSF PIRSF002134 1 118 2.0E-40 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 Gene3D G3DSA:4.10.910.10 72 118 3.8E-27 T 23-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 SUPERFAMILY SSF46946 2 114 4.19E-45 T 23-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 Gene3D G3DSA:1.10.8.50 1 71 5.7E-26 T 23-10-2018 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.7E-53 T 23-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15880 e3c0972a315832051e284845fd5a23c3 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.047 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_07695 5ca968b8ccd8897f478e6439d880632a 482 Pfam PF00171 Aldehyde dehydrogenase family 15 445 3.6E-93 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG60_07695 5ca968b8ccd8897f478e6439d880632a 482 Gene3D G3DSA:3.40.309.10 226 425 7.2E-161 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG60_07695 5ca968b8ccd8897f478e6439d880632a 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 222 229 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG60_07695 5ca968b8ccd8897f478e6439d880632a 482 Gene3D G3DSA:3.40.605.10 25 445 7.2E-161 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG60_07695 5ca968b8ccd8897f478e6439d880632a 482 SUPERFAMILY SSF53720 15 461 1.57E-117 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG60_07695 5ca968b8ccd8897f478e6439d880632a 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 250 261 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG60_07695 5ca968b8ccd8897f478e6439d880632a 482 PIRSF PIRSF036492 3 481 2.8E-171 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 CDG60_09490 dfd44bd9b62590798209e29a8ee96c7c 148 SMART SM00347 24 123 4.8E-13 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_09490 dfd44bd9b62590798209e29a8ee96c7c 148 SUPERFAMILY SSF46785 9 139 1.86E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_09490 dfd44bd9b62590798209e29a8ee96c7c 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.5E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_09490 dfd44bd9b62590798209e29a8ee96c7c 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.5E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_09490 dfd44bd9b62590798209e29a8ee96c7c 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.5E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_09490 dfd44bd9b62590798209e29a8ee96c7c 148 Pfam PF13463 Winged helix DNA-binding domain 32 96 8.4E-8 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_09490 dfd44bd9b62590798209e29a8ee96c7c 148 Gene3D G3DSA:1.10.10.10 1 142 4.6E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_11580 fc2f0e5ee2b95952575d5f7d9377527c 132 SMART SM00960 15 106 8.4E-5 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain CDG60_11580 fc2f0e5ee2b95952575d5f7d9377527c 132 Pfam PF03259 Roadblock/LC7 domain 16 96 7.3E-6 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain CDG60_11580 fc2f0e5ee2b95952575d5f7d9377527c 132 Gene3D G3DSA:3.30.450.30 15 131 4.8E-17 T 23-10-2018 CDG60_11580 fc2f0e5ee2b95952575d5f7d9377527c 132 SUPERFAMILY SSF103196 15 130 1.46E-12 T 23-10-2018 CDG60_11060 886d17936670cb13f0d12b7df4db1635 189 Gene3D G3DSA:3.30.420.10 1 188 2.1E-76 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_11060 886d17936670cb13f0d12b7df4db1635 189 Pfam PF01351 Ribonuclease HII 5 180 1.1E-42 T 23-10-2018 IPR024567 Ribonuclease HII/HIII domain CDG60_11060 886d17936670cb13f0d12b7df4db1635 189 Hamap MF_00052_B Ribonuclease HII [rnhB]. 2 182 37.615 T 23-10-2018 IPR022898 Ribonuclease HII GO:0004523 CDG60_11060 886d17936670cb13f0d12b7df4db1635 189 SUPERFAMILY SSF53098 3 187 4.55E-68 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_17620 05463ce6a62d994d5703f7a2d2ec084c 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 32.284 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDG60_17620 05463ce6a62d994d5703f7a2d2ec084c 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 3.7E-55 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDG60_17620 05463ce6a62d994d5703f7a2d2ec084c 146 Gene3D G3DSA:3.50.80.10 1 145 3.0E-53 T 23-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDG60_17620 05463ce6a62d994d5703f7a2d2ec084c 146 SUPERFAMILY SSF69500 1 144 4.97E-54 T 23-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDG60_17620 05463ce6a62d994d5703f7a2d2ec084c 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 5.3E-50 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDG60_12895 3196ec2007106286a4c66efe673e40af 1250 Gene3D G3DSA:2.60.40.10 884 1008 8.3E-7 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_12895 3196ec2007106286a4c66efe673e40af 1250 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 430 473 1.4E-8 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_12895 3196ec2007106286a4c66efe673e40af 1250 Pfam PF01345 Domain of unknown function DUF11 428 513 1.3E-8 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_12895 3196ec2007106286a4c66efe673e40af 1250 Gene3D G3DSA:2.60.40.740 424 567 1.4E-5 T 23-10-2018 CDG60_05475 c63d2fea95b296aa70ed4f06c065b1ce 249 SUPERFAMILY SSF64438 25 245 2.38E-65 T 23-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CDG60_05475 c63d2fea95b296aa70ed4f06c065b1ce 249 Gene3D G3DSA:3.60.140.10 17 248 3.1E-68 T 23-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CDG60_05475 c63d2fea95b296aa70ed4f06c065b1ce 249 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 245 4.7E-50 T 23-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CDG60_05475 c63d2fea95b296aa70ed4f06c065b1ce 249 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 28 243 2.3E-59 T 23-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CDG60_05280 755d1eecba25e4c202d11469d2fbb880 230 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 230 3.4E-27 T 23-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CDG60_05280 755d1eecba25e4c202d11469d2fbb880 230 Gene3D G3DSA:2.50.20.10 33 230 5.2E-52 T 23-10-2018 CDG60_05280 755d1eecba25e4c202d11469d2fbb880 230 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 22 230 29.273 T 23-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CDG60_05280 755d1eecba25e4c202d11469d2fbb880 230 SUPERFAMILY SSF89392 38 230 1.88E-45 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDG60_05280 755d1eecba25e4c202d11469d2fbb880 230 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 47 219 2.2E-39 T 23-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 313 2.0E-119 T 23-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 SUPERFAMILY SSF51905 2 313 2.22E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 23-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 Gene3D G3DSA:3.50.50.60 117 244 6.6E-121 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 Gene3D G3DSA:3.50.50.60 8 312 6.6E-121 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 301 5.0E-49 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 1.2E-75 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.1E-39 T 23-10-2018 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.1E-39 T 23-10-2018 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 3.1E-39 T 23-10-2018 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.1E-39 T 23-10-2018 CDG60_04575 a149482f83dd5c8bd4525ca087aa7731 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.1E-39 T 23-10-2018 CDG60_12455 30aa9a2127d2da9bab13c9d376fb1289 148 Pfam PF06127 Protein of unknown function (DUF962) 1 135 7.3E-22 T 23-10-2018 IPR009305 Protein of unknown function DUF962 CDG60_04395 1eb536450964978215fe5a21ebdda61a 270 SUPERFAMILY SSF53335 20 267 8.16E-52 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_04395 1eb536450964978215fe5a21ebdda61a 270 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 4 268 27.806 T 23-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CDG60_04395 1eb536450964978215fe5a21ebdda61a 270 Gene3D G3DSA:3.40.50.150 71 269 7.9E-61 T 23-10-2018 CDG60_04395 1eb536450964978215fe5a21ebdda61a 270 Pfam PF04445 Putative SAM-dependent methyltransferase 78 266 1.7E-51 T 23-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CDG60_08510 98ce490a799fd6219e09a942ab8ef065 116 SUPERFAMILY SSF75169 1 116 2.14E-7 T 23-10-2018 IPR027396 DsrEFH-like CDG60_08510 98ce490a799fd6219e09a942ab8ef065 116 Gene3D G3DSA:3.40.1260.10 1 115 1.2E-14 T 23-10-2018 IPR027396 DsrEFH-like CDG60_09225 0f6e0780ec8e4483a074e2c5bb269722 296 PIRSF PIRSF007580 7 289 1.6E-60 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_09225 0f6e0780ec8e4483a074e2c5bb269722 296 Pfam PF10118 Predicted metal-dependent hydrolase 20 270 3.3E-73 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_16090 19bf5eb9faf6d6c697a37572c3f4a7b0 257 Pfam PF13803 Domain of unknown function (DUF4184) 1 239 8.9E-57 T 23-10-2018 IPR025238 Protein of unknown function DUF4184 CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 474 19.717 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 503 3.1E-133 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 Pfam PF03023 MviN-like protein 30 474 7.4E-131 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PIRSF PIRSF002869 1 512 3.0E-155 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PRINTS PR01806 Virulence factor MviN signature 52 68 1.0E-68 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PRINTS PR01806 Virulence factor MviN signature 133 157 1.0E-68 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PRINTS PR01806 Virulence factor MviN signature 357 376 1.0E-68 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PRINTS PR01806 Virulence factor MviN signature 416 433 1.0E-68 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PRINTS PR01806 Virulence factor MviN signature 33 52 1.0E-68 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PRINTS PR01806 Virulence factor MviN signature 157 178 1.0E-68 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17765 9f06e648946a6544d9fb7d68a053016f 515 PRINTS PR01806 Virulence factor MviN signature 259 285 1.0E-68 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG60_17335 aaab546eaf6634ef568f0245c1f5efde 265 Pfam PF00753 Metallo-beta-lactamase superfamily 30 229 8.9E-13 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_17335 aaab546eaf6634ef568f0245c1f5efde 265 SMART SM00849 32 229 2.0E-16 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_17335 aaab546eaf6634ef568f0245c1f5efde 265 SUPERFAMILY SSF56281 30 250 6.86E-28 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_17335 aaab546eaf6634ef568f0245c1f5efde 265 Gene3D G3DSA:3.60.15.10 7 249 8.6E-33 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_03035 d1b98abf7995093f1189d30453eea84b 351 Gene3D G3DSA:3.60.15.10 67 351 7.2E-72 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_03035 d1b98abf7995093f1189d30453eea84b 351 SUPERFAMILY SSF56281 97 317 1.22E-28 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_03035 d1b98abf7995093f1189d30453eea84b 351 PIRSF PIRSF038896 12 351 5.1E-90 T 23-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 CDG60_03035 d1b98abf7995093f1189d30453eea84b 351 Pfam PF12706 Beta-lactamase superfamily domain 115 309 2.2E-35 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_01160 08652647cafcbc33c9332352edc0de63 183 SMART SM00479 7 182 0.0071 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_01160 08652647cafcbc33c9332352edc0de63 183 SUPERFAMILY SSF53098 5 177 1.64E-29 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_01160 08652647cafcbc33c9332352edc0de63 183 Gene3D G3DSA:3.30.420.10 2 180 4.2E-29 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_01160 08652647cafcbc33c9332352edc0de63 183 Pfam PF00929 Exonuclease 10 173 1.8E-9 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG60_00440 52205bca89f5fb31912ce2e92b6c7fb3 205 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 185 7.3E-16 T 23-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDG60_00440 52205bca89f5fb31912ce2e92b6c7fb3 205 PIRSF PIRSF009320 1 205 4.5E-42 T 23-10-2018 CDG60_00440 52205bca89f5fb31912ce2e92b6c7fb3 205 Gene3D G3DSA:3.40.50.300 1 205 1.1E-45 T 23-10-2018 CDG60_00440 52205bca89f5fb31912ce2e92b6c7fb3 205 SUPERFAMILY SSF52540 1 204 3.93E-34 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07080 722f9d862a24ff8bfaa2e77ae1433e0a 233 Pfam PF04402 Protein of unknown function (DUF541) 32 229 4.7E-26 T 23-10-2018 IPR007497 Protein of unknown function DUF541 CDG60_07080 722f9d862a24ff8bfaa2e77ae1433e0a 233 Gene3D G3DSA:3.30.70.2970 44 146 7.9E-20 T 23-10-2018 CDG60_07080 722f9d862a24ff8bfaa2e77ae1433e0a 233 Gene3D G3DSA:3.30.110.170 34 226 7.9E-20 T 23-10-2018 CDG60_02575 406a3e5679747970b7ed002c11b105a8 121 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 107 1.3E-25 T 23-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDG60_07995 eead6348eacc59df6e163d4bf2c088f8 149 SUPERFAMILY SSF55961 2 132 5.74E-20 T 23-10-2018 CDG60_07995 eead6348eacc59df6e163d4bf2c088f8 149 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 131 4.1E-12 T 23-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDG60_07995 eead6348eacc59df6e163d4bf2c088f8 149 Gene3D G3DSA:3.30.530.20 4 140 4.2E-26 T 23-10-2018 IPR023393 START-like domain superfamily CDG60_10175 573a89e8fd2a4a12ae275e2c24935d92 209 Pfam PF02631 RecX family 95 206 4.7E-25 T 23-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CDG60_10175 573a89e8fd2a4a12ae275e2c24935d92 209 Hamap MF_01114 Regulatory protein RecX [recX]. 28 209 13.05 T 23-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CDG60_10175 573a89e8fd2a4a12ae275e2c24935d92 209 Gene3D G3DSA:1.10.10.10 158 206 7.5E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_10175 573a89e8fd2a4a12ae275e2c24935d92 209 Gene3D G3DSA:1.10.10.10 114 157 2.4E-9 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04925 4260ff4d3284986689a32fde0ad38346 267 Pfam PF13489 Methyltransferase domain 37 192 2.2E-9 T 23-10-2018 CDG60_04925 4260ff4d3284986689a32fde0ad38346 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 7 265 29.06 T 23-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CDG60_04925 4260ff4d3284986689a32fde0ad38346 267 SUPERFAMILY SSF53335 22 236 9.23E-26 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_04925 4260ff4d3284986689a32fde0ad38346 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 15 265 7.7E-61 T 23-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CDG60_04925 4260ff4d3284986689a32fde0ad38346 267 Gene3D G3DSA:3.40.50.150 8 247 3.0E-21 T 23-10-2018 CDG60_05065 948a8ed0716cf396eac79b9ad4299ab3 427 PIRSF PIRSF000355 78 427 8.4E-140 T 23-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_05065 948a8ed0716cf396eac79b9ad4299ab3 427 SUPERFAMILY SSF47240 71 401 2.35E-97 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_05065 948a8ed0716cf396eac79b9ad4299ab3 427 Gene3D G3DSA:1.10.620.20 85 421 5.7E-111 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDG60_05065 948a8ed0716cf396eac79b9ad4299ab3 427 Pfam PF00268 Ribonucleotide reductase, small chain 108 395 9.3E-86 T 23-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG60_01110 89ce8e991b7913eb0b1428eaa5bd386e 413 SUPERFAMILY SSF53756 26 407 4.71E-43 T 23-10-2018 CDG60_01110 89ce8e991b7913eb0b1428eaa5bd386e 413 Pfam PF00534 Glycosyl transferases group 1 223 389 4.3E-14 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG60_01110 89ce8e991b7913eb0b1428eaa5bd386e 413 Gene3D G3DSA:3.40.50.2000 11 222 4.2E-16 T 23-10-2018 CDG60_01110 89ce8e991b7913eb0b1428eaa5bd386e 413 Pfam PF13439 Glycosyltransferase Family 4 26 209 1.6E-15 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDG60_01110 89ce8e991b7913eb0b1428eaa5bd386e 413 Gene3D G3DSA:3.40.50.2000 223 394 3.6E-23 T 23-10-2018 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Gene3D G3DSA:3.40.50.620 50 269 8.0E-100 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 362 547 2.1E-56 T 23-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Gene3D G3DSA:3.90.800.10 123 231 8.0E-100 T 23-10-2018 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Gene3D G3DSA:2.40.240.10 362 565 5.5E-78 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 50 359 5.7E-106 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 SUPERFAMILY SSF50715 362 567 9.94E-69 T 23-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 50 568 3.5E-224 T 23-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 SUPERFAMILY SSF52374 50 368 1.93E-94 T 23-10-2018 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 7 568 49.668 T 23-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Gene3D G3DSA:1.10.1160.10 283 361 5.5E-33 T 23-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 82 95 3.2E-7 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 232 242 3.2E-7 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 53 65 3.2E-7 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG60_07975 8a8054660cfb4489ad8dbfe7b8475bb2 572 Gene3D G3DSA:2.40.240.10 370 484 5.5E-78 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_00815 815fb6fffb2a357689ae9cb2a8fb239e 329 SUPERFAMILY SSF53850 25 246 3.78E-44 T 23-10-2018 CDG60_00815 815fb6fffb2a357689ae9cb2a8fb239e 329 SMART SM00062 26 250 1.2E-9 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG60_00815 815fb6fffb2a357689ae9cb2a8fb239e 329 Gene3D G3DSA:1.10.8.450 237 275 8.2E-55 T 23-10-2018 CDG60_00815 815fb6fffb2a357689ae9cb2a8fb239e 329 Gene3D G3DSA:3.40.190.10 28 236 8.2E-55 T 23-10-2018 CDG60_00815 815fb6fffb2a357689ae9cb2a8fb239e 329 Pfam PF09084 NMT1/THI5 like 33 234 8.4E-19 T 23-10-2018 IPR015168 SsuA/THI5-like CDG60_00815 815fb6fffb2a357689ae9cb2a8fb239e 329 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 27 325 3.2E-119 T 23-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 CDG60_00815 815fb6fffb2a357689ae9cb2a8fb239e 329 Gene3D G3DSA:3.40.190.10 104 203 8.2E-55 T 23-10-2018 CDG60_07820 8ac3a7494ccf6ee5ea2c673fcdf4b382 122 Gene3D G3DSA:2.170.150.70 2 113 1.8E-14 T 23-10-2018 CDG60_07820 8ac3a7494ccf6ee5ea2c673fcdf4b382 122 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 111 2.1E-16 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDG60_07820 8ac3a7494ccf6ee5ea2c673fcdf4b382 122 SUPERFAMILY SSF51316 2 115 2.2E-29 T 23-10-2018 IPR011057 Mss4-like superfamily CDG60_17855 28516826b471511e88a46e22304ceca2 36 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 33 1.9E-14 T 23-10-2018 IPR031596 Putative methionine and alanine importer, small subunit CDG60_06160 66adebb56b163c196ae8e70265f53690 481 Gene3D G3DSA:3.40.50.300 116 262 1.5E-14 T 23-10-2018 CDG60_06160 66adebb56b163c196ae8e70265f53690 481 Gene3D G3DSA:3.40.50.300 4 94 1.3E-11 T 23-10-2018 CDG60_06160 66adebb56b163c196ae8e70265f53690 481 Pfam PF05707 Zonular occludens toxin (Zot) 9 261 2.2E-16 T 23-10-2018 IPR008900 Zona occludens toxin CDG60_17195 5fab15c0f6c1501ab6c50248088b72be 571 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG60_17195 5fab15c0f6c1501ab6c50248088b72be 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 489 1.1E-61 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG60_17195 5fab15c0f6c1501ab6c50248088b72be 571 Pfam PF00474 Sodium:solute symporter family 68 489 1.8E-112 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG60_17195 5fab15c0f6c1501ab6c50248088b72be 571 Gene3D G3DSA:1.20.1730.10 55 568 6.4E-61 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily CDG60_09260 972be0b6548a042149e6259f222f71f0 833 PIRSF PIRSF500064 7 828 1.8E-204 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG60_09260 972be0b6548a042149e6259f222f71f0 833 PIRSF PIRSF000437 25 827 5.4E-199 T 23-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CDG60_09260 972be0b6548a042149e6259f222f71f0 833 Pfam PF01553 Acyltransferase 291 431 3.9E-20 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_09260 972be0b6548a042149e6259f222f71f0 833 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 15 800 5.2E-247 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG60_09260 972be0b6548a042149e6259f222f71f0 833 SMART SM00563 308 435 1.6E-26 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_09260 972be0b6548a042149e6259f222f71f0 833 SUPERFAMILY SSF69593 275 519 1.2E-22 T 23-10-2018 CDG60_14735 aa993de01093fd1ebe53b8d6a5203a2c 341 Pfam PF05175 Methyltransferase small domain 165 333 2.0E-51 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CDG60_14735 aa993de01093fd1ebe53b8d6a5203a2c 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_14735 aa993de01093fd1ebe53b8d6a5203a2c 341 Gene3D G3DSA:3.40.50.150 1 148 8.9E-41 T 23-10-2018 CDG60_14735 aa993de01093fd1ebe53b8d6a5203a2c 341 Gene3D G3DSA:3.40.50.150 150 340 1.1E-38 T 23-10-2018 CDG60_14735 aa993de01093fd1ebe53b8d6a5203a2c 341 SUPERFAMILY SSF53335 151 315 4.82E-23 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_14735 aa993de01093fd1ebe53b8d6a5203a2c 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 337 38.717 T 23-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 CDG60_14735 aa993de01093fd1ebe53b8d6a5203a2c 341 Pfam PF08468 Methyltransferase small domain N-terminal 5 156 2.5E-45 T 23-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 CDG60_00140 ec3b4d02bf4f2e0b3cd536d115b23ec0 312 Pfam PF01051 Initiator Replication protein 2 224 1.8E-55 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG60_00140 ec3b4d02bf4f2e0b3cd536d115b23ec0 312 SUPERFAMILY SSF46785 126 227 4.79E-31 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_00140 ec3b4d02bf4f2e0b3cd536d115b23ec0 312 Gene3D G3DSA:1.10.10.10 1 139 2.6E-43 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_00140 ec3b4d02bf4f2e0b3cd536d115b23ec0 312 SUPERFAMILY SSF46785 1 127 3.97E-34 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_00140 ec3b4d02bf4f2e0b3cd536d115b23ec0 312 Gene3D G3DSA:1.10.10.10 140 233 1.9E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 Gene3D G3DSA:1.25.40.10 430 569 6.3E-15 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 Gene3D G3DSA:1.25.40.10 162 257 3.9E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 SUPERFAMILY SSF48452 72 340 4.17E-15 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 SUPERFAMILY SSF48452 391 511 1.0E-12 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 Pfam PF13432 Tetratricopeptide repeat 252 305 0.0071 T 23-10-2018 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 Pfam PF13432 Tetratricopeptide repeat 461 513 7.2E-5 T 23-10-2018 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 Gene3D G3DSA:1.25.40.10 25 161 9.5E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 SMART SM00028 114 147 8.4 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 SMART SM00028 383 416 25.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 SMART SM00028 214 247 46.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 SMART SM00028 180 213 22.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 SMART SM00028 486 519 230.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG60_05450 a99be3aa98d0a11640324d35968bac07 570 Gene3D G3DSA:1.25.40.10 258 428 7.2E-11 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 Gene3D G3DSA:3.30.870.10 241 450 2.3E-33 T 23-10-2018 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 SUPERFAMILY SSF56024 39 207 4.71E-38 T 23-10-2018 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 Pfam PF13091 PLD-like domain 49 171 5.6E-18 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 Pfam PF13091 PLD-like domain 286 434 1.1E-17 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 SMART SM00155 138 165 0.0019 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 SMART SM00155 383 409 1.7E-6 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 Gene3D G3DSA:3.30.870.10 22 233 9.8E-38 T 23-10-2018 CDG60_09350 18500160e9dac6a0bbb210c53f1a4e10 492 SUPERFAMILY SSF56024 253 437 1.64E-23 T 23-10-2018 CDG60_02250 97e63416efd1fce5ff53403622dcd9ba 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 23-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_02250 97e63416efd1fce5ff53403622dcd9ba 168 Pfam PF00466 Ribosomal protein L10 6 103 1.8E-24 T 23-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CDG60_02250 97e63416efd1fce5ff53403622dcd9ba 168 Gene3D G3DSA:3.30.70.1730 1 126 2.1E-32 T 23-10-2018 CDG60_02250 97e63416efd1fce5ff53403622dcd9ba 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 163 26.13 T 23-10-2018 IPR022973 Ribosomal protein L10 CDG60_02250 97e63416efd1fce5ff53403622dcd9ba 168 SUPERFAMILY SSF160369 5 162 6.28E-44 T 23-10-2018 CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 SUPERFAMILY SSF81901 30 188 1.7E-20 T 23-10-2018 CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 SUPERFAMILY SSF81901 152 251 4.58E-7 T 23-10-2018 CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 SMART SM00671 59 94 2.9E-8 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 SMART SM00671 95 131 0.0013 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 SMART SM00671 206 241 18.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 Gene3D G3DSA:1.25.40.10 28 269 2.6E-34 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 Pfam PF08238 Sel1 repeat 95 130 9.8E-5 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_14685 63516c2d330d1ad06b89e958ab1be5e5 269 Pfam PF08238 Sel1 repeat 59 94 4.2E-8 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_09925 034547a4b249a5caa5b3411c492167a6 525 Gene3D G3DSA:3.30.830.10 64 274 4.6E-40 T 23-10-2018 CDG60_09925 034547a4b249a5caa5b3411c492167a6 525 SUPERFAMILY SSF63411 291 469 2.62E-37 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_09925 034547a4b249a5caa5b3411c492167a6 525 SUPERFAMILY SSF63411 66 265 5.59E-35 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG60_09925 034547a4b249a5caa5b3411c492167a6 525 Gene3D G3DSA:3.30.830.10 283 478 1.7E-47 T 23-10-2018 CDG60_09925 034547a4b249a5caa5b3411c492167a6 525 Pfam PF05193 Peptidase M16 inactive domain 226 401 7.0E-24 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG60_09925 034547a4b249a5caa5b3411c492167a6 525 Pfam PF00675 Insulinase (Peptidase family M16) 81 220 5.5E-13 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG60_04800 ba5f1963474299e811249d013cc2a053 388 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 26 363 4.1E-87 T 23-10-2018 IPR010640 Low temperature requirement A CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.7E-12 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.7E-12 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.7E-12 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.7E-12 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.7E-12 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 Gene3D G3DSA:1.10.420.20 191 399 1.3E-202 T 23-10-2018 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 Hamap MF_01961 Catalase-peroxidase [katG]. 5 729 39.19 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 Gene3D G3DSA:1.10.420.10 583 704 2.3E-145 T 23-10-2018 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 Pfam PF00141 Peroxidase 406 703 4.5E-38 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 Pfam PF00141 Peroxidase 70 398 1.5E-43 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 7.8E-48 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 7.8E-48 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 481 507 7.8E-48 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 7.8E-48 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 7.8E-48 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 SUPERFAMILY SSF48113 19 431 8.57E-139 T 23-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 SUPERFAMILY SSF48113 432 728 9.87E-107 T 23-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 Gene3D G3DSA:1.10.520.10 21 432 1.3E-202 T 23-10-2018 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 Gene3D G3DSA:1.10.520.10 433 728 2.3E-145 T 23-10-2018 CDG60_03040 fcb9acc7413fbd3a39b9b89217ebcb27 729 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 13 728 0.0 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG60_06315 70af9ede4228aba948f993b69cd82c28 198 Pfam PF01126 Heme oxygenase 13 192 3.2E-19 T 23-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_06315 70af9ede4228aba948f993b69cd82c28 198 Gene3D G3DSA:1.20.910.10 2 194 3.1E-44 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_06315 70af9ede4228aba948f993b69cd82c28 198 SUPERFAMILY SSF48613 11 194 1.43E-46 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG60_10325 eab339c247b42522e46878e93a390434 330 Gene3D G3DSA:1.10.40.60 100 208 8.3E-68 T 23-10-2018 IPR038072 GspK, central domain superfamily CDG60_10325 eab339c247b42522e46878e93a390434 330 SUPERFAMILY SSF158544 102 206 2.09E-29 T 23-10-2018 IPR038072 GspK, central domain superfamily CDG60_10325 eab339c247b42522e46878e93a390434 330 PIRSF PIRSF002786 1 315 1.8E-85 T 23-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CDG60_10325 eab339c247b42522e46878e93a390434 330 Pfam PF03934 Type II secretion system (T2SS), protein K 30 307 1.2E-72 T 23-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CDG60_10325 eab339c247b42522e46878e93a390434 330 SUPERFAMILY SSF54523 38 311 1.73E-18 T 23-10-2018 CDG60_10325 eab339c247b42522e46878e93a390434 330 Gene3D G3DSA:1.10.40.60 209 276 8.3E-68 T 23-10-2018 IPR038072 GspK, central domain superfamily CDG60_10325 eab339c247b42522e46878e93a390434 330 Gene3D G3DSA:3.30.1300.30 43 301 8.3E-68 T 23-10-2018 CDG60_12580 7f815e82028657f2f9ad0810d8031e12 1270 Pfam PF06744 Type VI secretion protein IcmF C-terminal 971 1177 1.7E-44 T 23-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal CDG60_12580 7f815e82028657f2f9ad0810d8031e12 1270 SUPERFAMILY SSF52540 119 279 2.31E-9 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12580 7f815e82028657f2f9ad0810d8031e12 1270 Gene3D G3DSA:3.40.50.300 123 308 6.4E-6 T 23-10-2018 CDG60_12580 7f815e82028657f2f9ad0810d8031e12 1270 Pfam PF14331 ImcF-related N-terminal domain 186 446 7.6E-76 T 23-10-2018 IPR025743 ImcF-related, N-terminal domain CDG60_12580 7f815e82028657f2f9ad0810d8031e12 1270 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 43 1188 3.2E-189 T 23-10-2018 IPR017731 Type VI secretion system, IcmF CDG60_12580 7f815e82028657f2f9ad0810d8031e12 1270 Pfam PF06761 Intracellular multiplication and human macrophage-killing 496 835 1.3E-74 T 23-10-2018 IPR009612 ImcF-related CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 SUPERFAMILY SSF50104 3 99 2.77E-29 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 2.4E-34 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 23-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 SMART SM00739 3 30 3.1E-6 T 23-10-2018 IPR005824 KOW CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 Gene3D G3DSA:2.30.30.30 1 102 9.9E-34 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 95 19.111 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 Pfam PF00467 KOW motif 6 34 1.6E-6 T 23-10-2018 IPR005824 KOW CDG60_15935 17a63961b981908819f5e70bdb1f6cb3 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 100 1.1E-20 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 52 174 28.945 T 23-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 PRINTS PR00618 DksA/TraR zinc finger signature 150 162 8.5E-5 T 23-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 PRINTS PR00618 DksA/TraR zinc finger signature 138 149 8.5E-5 T 23-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 Gene3D G3DSA:1.20.120.910 45 174 1.1E-36 T 23-10-2018 CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 SUPERFAMILY SSF109635 37 134 1.11E-34 T 23-10-2018 IPR037187 DksA, N-terminal domain superfamily CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 56 164 7.1E-51 T 23-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 134 167 1.1E-11 T 23-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 SUPERFAMILY SSF57716 135 172 3.28E-10 T 23-10-2018 CDG60_02085 9bf221c35545286a22c250e0d8d576b2 175 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 138 162 - T 23-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDG60_13460 25f8c1b3fe8a0e08ccedf48fb26943fa 271 SUPERFAMILY SSF51556 3 267 4.52E-59 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_13460 25f8c1b3fe8a0e08ccedf48fb26943fa 271 Gene3D G3DSA:3.20.20.140 3 269 5.1E-69 T 23-10-2018 CDG60_13460 25f8c1b3fe8a0e08ccedf48fb26943fa 271 Pfam PF04909 Amidohydrolase 4 265 3.6E-25 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 Pfam PF03466 LysR substrate binding domain 91 306 9.5E-32 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 SUPERFAMILY SSF53850 92 309 2.17E-34 T 23-10-2018 CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 Gene3D G3DSA:3.40.190.10 90 188 1.1E-26 T 23-10-2018 CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 SUPERFAMILY SSF46785 3 85 1.51E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.5E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 Gene3D G3DSA:1.10.10.10 7 89 3.9E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_08055 59a8abfb72983b7ccb5b205c729e8ce9 325 Gene3D G3DSA:3.40.190.10 189 279 4.2E-21 T 23-10-2018 CDG60_13190 3ffa4e7cd3dc31c906fc3f6dd59ed6d1 180 Gene3D G3DSA:3.40.50.2020 1 174 2.4E-41 T 23-10-2018 CDG60_13190 3ffa4e7cd3dc31c906fc3f6dd59ed6d1 180 SUPERFAMILY SSF53271 7 159 7.6E-31 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_13190 3ffa4e7cd3dc31c906fc3f6dd59ed6d1 180 Pfam PF00156 Phosphoribosyl transferase domain 42 153 9.0E-16 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG60_08660 bc79b374184c1cc52b7ada7842a25988 573 Gene3D G3DSA:3.40.50.300 32 258 2.5E-18 T 23-10-2018 CDG60_08660 bc79b374184c1cc52b7ada7842a25988 573 Pfam PF03354 Phage Terminase 84 549 2.9E-73 T 23-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type CDG60_14085 972bc2da983e72f3527618e15750e995 171 Pfam PF02417 Chromate transporter 5 167 6.8E-35 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 Gene3D G3DSA:1.10.275.10 23 227 3.7E-191 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 Gene3D G3DSA:1.20.200.10 117 447 3.7E-191 T 23-10-2018 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 454 9.3E-195 T 23-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 1.4E-66 T 23-10-2018 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00145 Argininosuccinate lyase family signature 308 327 1.4E-66 T 23-10-2018 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 1.4E-66 T 23-10-2018 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 1.4E-66 T 23-10-2018 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 1.4E-66 T 23-10-2018 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00145 Argininosuccinate lyase family signature 191 207 1.4E-66 T 23-10-2018 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 1 452 43.185 T 23-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 Pfam PF00206 Lyase 4 298 5.7E-77 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 Pfam PF14698 Argininosuccinate lyase C-terminal 361 430 6.6E-26 T 23-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 5.0E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 5.0E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 5.0E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 5.0E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 SUPERFAMILY SSF48557 1 454 5.81E-154 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG60_02125 054cdc3345e4fa778a2adf7f1588f5ee 459 Gene3D G3DSA:1.10.40.30 358 431 3.7E-191 T 23-10-2018 CDG60_13970 ad9241cb172d89718ccfefeb95d6dbfa 247 Pfam PF13274 Protein of unknown function (DUF4065) 122 215 6.1E-21 T 23-10-2018 IPR025272 Domain of unknown function DUF4065 CDG60_02505 77600dce373c84370ec663841115e974 263 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 258 55.339 T 23-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_02505 77600dce373c84370ec663841115e974 263 ProSitePatterns PS00171 Triosephosphate isomerase active site. 176 186 - T 23-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_02505 77600dce373c84370ec663841115e974 263 Pfam PF00121 Triosephosphate isomerase 9 255 6.5E-82 T 23-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_02505 77600dce373c84370ec663841115e974 263 SUPERFAMILY SSF51351 7 260 7.33E-81 T 23-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_02505 77600dce373c84370ec663841115e974 263 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 10 249 2.2E-53 T 23-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_02505 77600dce373c84370ec663841115e974 263 Gene3D G3DSA:3.20.20.70 5 263 4.9E-87 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_16415 8b63411e3764fbdb74e555f8da4f6f5c 325 Gene3D G3DSA:3.40.50.1820 35 325 1.3E-83 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_16415 8b63411e3764fbdb74e555f8da4f6f5c 325 SUPERFAMILY SSF53474 39 297 7.02E-42 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_16415 8b63411e3764fbdb74e555f8da4f6f5c 325 Pfam PF00561 alpha/beta hydrolase fold 43 273 8.7E-15 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_08735 d2b620670b685d8776820a175b83193b 165 Pfam PF08875 Domain of unknown function (DUF1833) 11 117 1.1E-7 T 23-10-2018 IPR014974 Domain of unknown function DUF1833 CDG60_01075 97e350f066bcfa3b2074a2f1204a196d 314 Gene3D G3DSA:3.30.360.10 131 314 7.0E-66 T 23-10-2018 CDG60_01075 97e350f066bcfa3b2074a2f1204a196d 314 Gene3D G3DSA:3.40.50.720 1 130 4.9E-30 T 23-10-2018 CDG60_01075 97e350f066bcfa3b2074a2f1204a196d 314 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 152 229 7.9E-14 T 23-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CDG60_01075 97e350f066bcfa3b2074a2f1204a196d 314 SUPERFAMILY SSF51735 3 172 5.25E-28 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01075 97e350f066bcfa3b2074a2f1204a196d 314 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 124 7.3E-22 T 23-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 SMART SM00382 30 218 4.6E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 Pfam PF00005 ABC transporter 21 169 2.2E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 SMART SM00930 262 337 4.8E-18 T 23-10-2018 IPR018449 NIL domain CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 SUPERFAMILY SSF55021 250 335 6.18E-19 T 23-10-2018 CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 SUPERFAMILY SSF52540 1 240 8.23E-83 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 Gene3D G3DSA:3.40.50.300 1 232 2.0E-74 T 23-10-2018 CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 Pfam PF09383 NIL domain 265 335 1.5E-18 T 23-10-2018 IPR018449 NIL domain CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_11240 5b0da55cbb682c4c8c4bbe8dfc076533 341 Gene3D G3DSA:3.30.70.260 233 339 1.2E-26 T 23-10-2018 CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 Pfam PF00158 Sigma-54 interaction domain 186 353 1.0E-49 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 275 290 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 5 183 6.5E-75 T 23-10-2018 IPR009715 Regulator of RNA terminal phosphate cyclase CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 SUPERFAMILY SSF52540 192 436 6.93E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 Gene3D G3DSA:1.10.8.60 360 444 2.1E-9 T 23-10-2018 CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 PIRSF PIRSF037354 4 531 2.3E-234 T 23-10-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 Gene3D G3DSA:3.40.50.300 169 359 2.1E-51 T 23-10-2018 CDG60_11870 31cf650a50f043c40c00436aaebe4ed9 532 SMART SM00382 206 352 2.3E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_08125 c0c9adf9675f551d30a0ef0beeb9c444 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 22 277 4.4E-114 T 23-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG60_08125 c0c9adf9675f551d30a0ef0beeb9c444 285 Gene3D G3DSA:3.20.20.70 2 285 1.8E-96 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_08125 c0c9adf9675f551d30a0ef0beeb9c444 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 279 48.362 T 23-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG60_08125 c0c9adf9675f551d30a0ef0beeb9c444 285 SUPERFAMILY SSF51569 7 281 1.56E-100 T 23-10-2018 CDG60_08125 c0c9adf9675f551d30a0ef0beeb9c444 285 Pfam PF00793 DAHP synthetase I family 14 276 5.8E-72 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG60_06575 8e6dee55c1d7e13df69f2f01c4338d56 341 Gene3D G3DSA:3.90.226.10 86 291 6.9E-66 T 23-10-2018 CDG60_06575 8e6dee55c1d7e13df69f2f01c4338d56 341 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 85 297 5.1E-49 T 23-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CDG60_06575 8e6dee55c1d7e13df69f2f01c4338d56 341 Pfam PF01343 Peptidase family S49 148 300 2.7E-38 T 23-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CDG60_06575 8e6dee55c1d7e13df69f2f01c4338d56 341 Gene3D G3DSA:3.40.1750.20 189 255 6.9E-66 T 23-10-2018 CDG60_06575 8e6dee55c1d7e13df69f2f01c4338d56 341 SUPERFAMILY SSF52096 81 286 5.8E-41 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 375 2.5E-168 T 23-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 SUPERFAMILY SSF55031 181 290 7.18E-33 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 Pfam PF01546 Peptidase family M20/M25/M40 64 373 1.4E-44 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.645 T 23-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 Pfam PF07687 Peptidase dimerisation domain 177 284 2.2E-25 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 Gene3D G3DSA:3.30.70.360 181 294 1.1E-133 T 23-10-2018 CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 Gene3D G3DSA:3.40.630.10 12 364 1.1E-133 T 23-10-2018 CDG60_13610 4d3e288b2401e577d2209703b62c74b5 377 SUPERFAMILY SSF53187 3 376 1.51E-65 T 23-10-2018 CDG60_12075 be9b85a803779300b90fdedcd4ac9338 222 Gene3D G3DSA:3.40.50.360 1 215 8.6E-49 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_12075 be9b85a803779300b90fdedcd4ac9338 222 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 213 25.061 T 23-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CDG60_12075 be9b85a803779300b90fdedcd4ac9338 222 Pfam PF02525 Flavodoxin-like fold 3 210 1.5E-36 T 23-10-2018 IPR003680 Flavodoxin-like fold CDG60_12075 be9b85a803779300b90fdedcd4ac9338 222 SUPERFAMILY SSF52218 1 214 5.32E-39 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 SUPERFAMILY SSF53098 3 155 3.68E-52 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.708 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 1.6E-61 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.4E-59 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 23-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CDG60_10640 4b1f020f06fef73bbe11ee44296c0166 181 Gene3D G3DSA:3.30.420.10 3 157 7.0E-51 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_01360 2da0ca479121e12b672a13c336f63ac5 156 Gene3D G3DSA:3.40.50.960 3 156 2.1E-59 T 23-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01360 2da0ca479121e12b672a13c336f63ac5 156 SUPERFAMILY SSF52121 11 156 1.01E-59 T 23-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01360 2da0ca479121e12b672a13c336f63ac5 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 31.122 T 23-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01360 2da0ca479121e12b672a13c336f63ac5 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 4.9E-53 T 23-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_01360 2da0ca479121e12b672a13c336f63ac5 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 2.6E-56 T 23-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG60_18040 2b7aafb9827bfaf392dcc23a24a4914c 138 Pfam PF06042 Nucleotidyltransferase 23 136 7.1E-32 T 23-10-2018 IPR009267 Putative nucleotidyltransferase CDG60_17330 37b62bb79b123736942fcacce9d0b074 121 Pfam PF03692 Putative zinc- or iron-chelating domain 10 87 1.4E-8 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CDG60_17165 9af08cfe449660b0cff8a74cb2696173 283 Pfam PF00905 Penicillin binding protein transpeptidase domain 74 263 3.7E-24 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG60_17165 9af08cfe449660b0cff8a74cb2696173 283 Gene3D G3DSA:3.40.710.10 31 279 4.4E-79 T 23-10-2018 CDG60_17165 9af08cfe449660b0cff8a74cb2696173 283 SUPERFAMILY SSF56601 39 251 3.94E-29 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 4.6E-235 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 550 6.3E-200 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 24.888 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 Pfam PF05746 DALR anticodon binding domain 582 679 2.6E-8 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 SUPERFAMILY SSF109604 337 502 7.69E-17 T 23-10-2018 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_02875 ea1f9578022c38d3ef8ad16fd58e5727 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 379 5.9E-108 T 23-10-2018 IPR017687 Outer membrane protein assembly factor BamB CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 381 27.775 T 23-10-2018 IPR017687 Outer membrane protein assembly factor BamB CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 SMART SM00564 242 273 43.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 SMART SM00564 321 352 49.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 SMART SM00564 191 222 140.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 SMART SM00564 104 136 0.0011 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 SMART SM00564 145 176 0.042 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 SMART SM00564 280 311 0.39 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 Gene3D G3DSA:2.130.10.10 48 381 1.4E-78 T 23-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 Pfam PF13360 PQQ-like domain 79 310 4.5E-40 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG60_15135 1caacab825bb91b71810bc0c662da0a0 382 SUPERFAMILY SSF50998 35 369 4.51E-61 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG60_16550 656c579e963369a9bc40b717f4f57bef 93 SUPERFAMILY SSF63562 1 70 7.06E-26 T 23-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG60_16550 656c579e963369a9bc40b717f4f57bef 93 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 9.0E-23 T 23-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_16550 656c579e963369a9bc40b717f4f57bef 93 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.463 T 23-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG60_16550 656c579e963369a9bc40b717f4f57bef 93 Pfam PF01192 RNA polymerase Rpb6 8 59 5.1E-18 T 23-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG60_16550 656c579e963369a9bc40b717f4f57bef 93 Gene3D G3DSA:3.90.940.10 1 85 9.5E-28 T 23-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG60_16550 656c579e963369a9bc40b717f4f57bef 93 SMART SM01409 8 61 3.3E-18 T 23-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 SMART SM00836 475 601 3.3E-44 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 91 2.4E-20 T 23-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 344 365 3.8E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 3.8E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 3.8E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 3.8E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 SUPERFAMILY SSF52374 117 484 1.26E-81 T 23-10-2018 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 Gene3D G3DSA:1.10.730.10 470 601 1.8E-29 T 23-10-2018 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 Pfam PF05746 DALR anticodon binding domain 475 601 7.4E-30 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 601 7.3E-127 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 SMART SM01016 3 91 1.3E-31 T 23-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 Gene3D G3DSA:3.30.1360.70 1 111 3.7E-23 T 23-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 SUPERFAMILY SSF47323 469 601 4.38E-28 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 601 24.299 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 SUPERFAMILY SSF55190 21 111 2.88E-22 T 23-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 Pfam PF00750 tRNA synthetases class I (R) 101 177 9.4E-10 T 23-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CDG60_01475 1cdc75132a6b5b8d82310d4bbf2ac266 601 Pfam PF00750 tRNA synthetases class I (R) 272 456 4.2E-12 T 23-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CDG60_09130 4e2e9faf68e693e8dc653190651822d8 624 Gene3D G3DSA:3.40.50.300 1 352 5.8E-33 T 23-10-2018 CDG60_09130 4e2e9faf68e693e8dc653190651822d8 624 SUPERFAMILY SSF52540 1 351 3.63E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09130 4e2e9faf68e693e8dc653190651822d8 624 Pfam PF13175 AAA ATPase domain 193 336 9.3E-20 T 23-10-2018 CDG60_09130 4e2e9faf68e693e8dc653190651822d8 624 Pfam PF13175 AAA ATPase domain 1 96 3.0E-17 T 23-10-2018 CDG60_13600 f8ce58f81868d0a99bb9aa0016ebef3b 302 Pfam PF08907 Domain of unknown function (DUF1853) 23 252 3.2E-42 T 23-10-2018 IPR015003 Protein of unknown function DUF1853 CDG60_12865 1d3ff659015118d8ec58a37ff418d4e0 147 Gene3D G3DSA:3.40.960.10 40 147 6.0E-10 T 23-10-2018 CDG60_12865 1d3ff659015118d8ec58a37ff418d4e0 147 Pfam PF10881 Protein of unknown function (DUF2726) 37 145 4.2E-20 T 23-10-2018 IPR024402 Domain of unknown function DUF2726 CDG60_09055 3d2b4f3b87c35b9e5513d143abf03727 406 Pfam PF05144 Phage replication protein CRI 1 265 8.4E-58 T 23-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 CDG60_09055 3d2b4f3b87c35b9e5513d143abf03727 406 Pfam PF05155 Phage X family 309 398 1.0E-15 T 23-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 CDG60_09055 3d2b4f3b87c35b9e5513d143abf03727 406 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 3 402 2.5E-82 T 23-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 CDG60_09070 3d2b4f3b87c35b9e5513d143abf03727 406 Pfam PF05144 Phage replication protein CRI 1 265 8.4E-58 T 23-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 CDG60_09070 3d2b4f3b87c35b9e5513d143abf03727 406 Pfam PF05155 Phage X family 309 398 1.0E-15 T 23-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 CDG60_09070 3d2b4f3b87c35b9e5513d143abf03727 406 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 3 402 2.5E-82 T 23-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 CDG60_07315 c60e7ca2513bd8f93094b632dabc787f 205 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 205 6.8E-80 T 23-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 CDG60_07315 c60e7ca2513bd8f93094b632dabc787f 205 Pfam PF00510 Cytochrome c oxidase subunit III 20 203 1.5E-14 T 23-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07315 c60e7ca2513bd8f93094b632dabc787f 205 Gene3D G3DSA:1.20.120.80 17 205 4.0E-53 T 23-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_07315 c60e7ca2513bd8f93094b632dabc787f 205 SUPERFAMILY SSF81452 8 203 8.76E-56 T 23-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG60_11810 525960ff6d6b7b9f9fab70e86a4fee46 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG60_11810 525960ff6d6b7b9f9fab70e86a4fee46 743 PIRSF PIRSF009407 1 743 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG60_11810 525960ff6d6b7b9f9fab70e86a4fee46 743 SUPERFAMILY SSF53659 5 742 0.0 T 23-10-2018 CDG60_11810 525960ff6d6b7b9f9fab70e86a4fee46 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 742 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG60_11810 525960ff6d6b7b9f9fab70e86a4fee46 743 Gene3D G3DSA:3.40.718.10 406 666 3.5E-8 T 23-10-2018 CDG60_12520 7e08729ffe450dfc561144a84681aed4 287 PIRSF PIRSF006232 1 287 4.0E-77 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG60_12520 7e08729ffe450dfc561144a84681aed4 287 Gene3D G3DSA:2.60.120.10 149 256 8.6E-77 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_12520 7e08729ffe450dfc561144a84681aed4 287 Gene3D G3DSA:2.60.120.10 17 283 8.6E-77 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_12520 7e08729ffe450dfc561144a84681aed4 287 SUPERFAMILY SSF51182 2 286 1.78E-71 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_12520 7e08729ffe450dfc561144a84681aed4 287 Pfam PF02678 Pirin 24 127 1.3E-27 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG60_12520 7e08729ffe450dfc561144a84681aed4 287 Pfam PF05726 Pirin C-terminal cupin domain 187 286 8.2E-25 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDG60_09265 e9681d607215582f2af554842451908b 105 Gene3D G3DSA:1.10.10.10 6 103 5.8E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09265 e9681d607215582f2af554842451908b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 3.7E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_09265 e9681d607215582f2af554842451908b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 3.7E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_09265 e9681d607215582f2af554842451908b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 3.7E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_09265 e9681d607215582f2af554842451908b 105 SUPERFAMILY SSF46785 14 100 4.12E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_09265 e9681d607215582f2af554842451908b 105 SMART SM00418 19 94 8.1E-20 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_09265 e9681d607215582f2af554842451908b 105 Pfam PF01022 Bacterial regulatory protein, arsR family 28 71 1.7E-12 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_13360 abc35ad03ce29b264d0046be795ec816 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 261 6.7E-42 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG60_13360 abc35ad03ce29b264d0046be795ec816 262 Gene3D G3DSA:3.90.226.10 2 204 3.2E-55 T 23-10-2018 CDG60_13360 abc35ad03ce29b264d0046be795ec816 262 Gene3D G3DSA:1.10.12.10 205 262 3.1E-19 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDG60_13360 abc35ad03ce29b264d0046be795ec816 262 SUPERFAMILY SSF52096 7 261 3.11E-63 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_13985 204ea1bf1b2d3fe64c31aeae89521481 472 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 60 472 1.7E-11 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG60_13985 204ea1bf1b2d3fe64c31aeae89521481 472 SUPERFAMILY SSF56935 22 472 1.33E-41 T 23-10-2018 CDG60_13985 204ea1bf1b2d3fe64c31aeae89521481 472 Gene3D G3DSA:2.40.160.60 32 472 3.9E-26 T 23-10-2018 CDG60_07915 fc87280b70813028c6329651d110c2eb 388 SUPERFAMILY SSF51197 6 295 7.14E-60 T 23-10-2018 CDG60_07915 fc87280b70813028c6329651d110c2eb 388 Gene3D G3DSA:2.60.120.650 1 213 2.2E-74 T 23-10-2018 CDG60_07915 fc87280b70813028c6329651d110c2eb 388 Pfam PF08007 Cupin superfamily protein 14 311 3.8E-88 T 23-10-2018 IPR003347 JmjC domain CDG60_07915 fc87280b70813028c6329651d110c2eb 388 SMART SM00558 90 228 5.9E-5 T 23-10-2018 IPR003347 JmjC domain CDG60_07915 fc87280b70813028c6329651d110c2eb 388 Gene3D G3DSA:1.10.10.2510 238 388 1.3E-13 T 23-10-2018 CDG60_04025 65e5660ce3b6bf886b625ba2edf4d14a 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_04025 65e5660ce3b6bf886b625ba2edf4d14a 267 Gene3D G3DSA:3.20.20.70 1 267 2.4E-100 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_04025 65e5660ce3b6bf886b625ba2edf4d14a 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 35.203 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_04025 65e5660ce3b6bf886b625ba2edf4d14a 267 Pfam PF00290 Tryptophan synthase alpha chain 8 260 4.0E-88 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_04025 65e5660ce3b6bf886b625ba2edf4d14a 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 252 1.8E-76 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG60_04025 65e5660ce3b6bf886b625ba2edf4d14a 267 SUPERFAMILY SSF51366 1 249 1.41E-91 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 144 1.6E-16 T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 PRINTS PR01650 Bacterial translocase SecE signature 111 131 5.4E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 PRINTS PR01650 Bacterial translocase SecE signature 66 87 5.4E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 PRINTS PR01650 Bacterial translocase SecE signature 87 107 5.4E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 PRINTS PR01650 Bacterial translocase SecE signature 131 146 5.4E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 93 121 - T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 Gene3D G3DSA:1.20.5.1030 88 144 1.3E-15 T 23-10-2018 IPR038379 SecE superfamily CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 Hamap MF_00422 Protein translocase subunit SecE [secE]. 88 143 12.26 T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG60_02230 01630768298a425f5a9ad65d513b5a93 146 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 91 145 1.4E-18 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG60_00475 b69b3df84aaafb23930cbd960f49f128 192 SUPERFAMILY SSF51306 62 187 2.27E-31 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_00475 b69b3df84aaafb23930cbd960f49f128 192 Gene3D G3DSA:2.10.109.10 74 189 1.6E-41 T 23-10-2018 CDG60_00475 b69b3df84aaafb23930cbd960f49f128 192 Pfam PF00717 Peptidase S24-like 104 171 1.3E-11 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_00475 b69b3df84aaafb23930cbd960f49f128 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 101 111 1.3E-5 T 23-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CDG60_00475 b69b3df84aaafb23930cbd960f49f128 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 112 123 1.3E-5 T 23-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CDG60_00475 b69b3df84aaafb23930cbd960f49f128 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 140 152 1.3E-5 T 23-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CDG60_00385 3690a9bb8ce09869a45f4b4e2f201712 160 ProSitePatterns PS01123 Thermonuclease family signature 1. 29 54 - T 23-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 CDG60_00385 3690a9bb8ce09869a45f4b4e2f201712 160 SMART SM00318 18 147 2.9E-43 T 23-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CDG60_00385 3690a9bb8ce09869a45f4b4e2f201712 160 SUPERFAMILY SSF50199 16 152 4.18E-38 T 23-10-2018 CDG60_00385 3690a9bb8ce09869a45f4b4e2f201712 160 Pfam PF00565 Staphylococcal nuclease homologue 44 146 7.2E-26 T 23-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CDG60_00385 3690a9bb8ce09869a45f4b4e2f201712 160 Gene3D G3DSA:2.40.50.90 11 152 1.9E-36 T 23-10-2018 IPR035437 SNase-like, OB-fold superfamily CDG60_15615 c0229a5b5db50626c6b8fa1ade8d55ca 366 PIRSF PIRSF000138 7 366 1.5E-115 T 23-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDG60_15615 c0229a5b5db50626c6b8fa1ade8d55ca 366 Gene3D G3DSA:3.20.20.70 15 366 6.1E-118 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_15615 c0229a5b5db50626c6b8fa1ade8d55ca 366 SUPERFAMILY SSF51395 18 361 3.17E-84 T 23-10-2018 CDG60_15615 c0229a5b5db50626c6b8fa1ade8d55ca 366 Pfam PF01070 FMN-dependent dehydrogenase 26 364 3.9E-114 T 23-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 CDG60_04645 9cbc2d682acf5aab2895691cb46bee5e 259 Pfam PF13444 Acetyltransferase (GNAT) domain 44 139 1.1E-16 T 23-10-2018 CDG60_04645 9cbc2d682acf5aab2895691cb46bee5e 259 Gene3D G3DSA:3.40.630.30 29 192 3.1E-15 T 23-10-2018 CDG60_04645 9cbc2d682acf5aab2895691cb46bee5e 259 SUPERFAMILY SSF55729 24 230 5.72E-24 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 Gene3D G3DSA:3.40.50.300 281 641 3.2E-115 T 23-10-2018 CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 Gene3D G3DSA:3.40.50.300 8 273 6.1E-91 T 23-10-2018 CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 678 38.922 T 23-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 6.7E-69 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 SUPERFAMILY SSF52540 5 647 6.62E-157 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 Gene3D G3DSA:1.10.486.10 384 553 3.2E-115 T 23-10-2018 CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 Gene3D G3DSA:1.10.10.160 112 188 6.1E-91 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily CDG60_04625 0316013abf90de3c05ce3e61c9664356 679 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 272 3.3E-71 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG60_11975 0eacab79a1503f97c26a3ef31cabb630 121 SUPERFAMILY SSF101756 18 120 1.57E-26 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG60_11975 0eacab79a1503f97c26a3ef31cabb630 121 Gene3D G3DSA:2.40.50.200 16 121 1.5E-29 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG60_11975 0eacab79a1503f97c26a3ef31cabb630 121 Pfam PF04076 Bacterial OB fold (BOF) protein 32 120 4.0E-24 T 23-10-2018 IPR005220 Bacterial OB-fold CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 SUPERFAMILY SSF55831 1 280 2.36E-127 T 23-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 Hamap MF_00008 Thymidylate synthase [thyA]. 1 280 39.694 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 PRINTS PR00108 Thymidylate synthase family signature 131 150 4.3E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.3E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 PRINTS PR00108 Thymidylate synthase family signature 175 201 4.3E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 PRINTS PR00108 Thymidylate synthase family signature 213 230 4.3E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 PRINTS PR00108 Thymidylate synthase family signature 157 172 4.3E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 Gene3D G3DSA:3.30.572.10 1 280 1.6E-130 T 23-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 Pfam PF00303 Thymidylate synthase 3 280 6.4E-118 T 23-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 ProSitePatterns PS00091 Thymidylate synthase active site. 142 170 - T 23-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_15710 68f465c47ca0ba581243226c0d52fda8 280 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 280 5.2E-139 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG60_08215 f26a1d56dd2542fee471e3c8358bdd58 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 390 3.0E-40 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_08215 f26a1d56dd2542fee471e3c8358bdd58 399 Gene3D G3DSA:1.20.140.10 245 389 3.1E-32 T 23-10-2018 CDG60_08215 f26a1d56dd2542fee471e3c8358bdd58 399 Gene3D G3DSA:2.40.110.10 128 244 3.5E-36 T 23-10-2018 CDG60_08215 f26a1d56dd2542fee471e3c8358bdd58 399 SUPERFAMILY SSF47203 239 393 3.7E-33 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_08215 f26a1d56dd2542fee471e3c8358bdd58 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.4E-23 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_08215 f26a1d56dd2542fee471e3c8358bdd58 399 SUPERFAMILY SSF56645 7 252 2.49E-43 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_13500 60c174145dd47de075a1448d8121c4b6 404 PIRSF PIRSF004810 1 404 1.1E-92 T 23-10-2018 IPR014047 Chromate transporter, long chain CDG60_13500 60c174145dd47de075a1448d8121c4b6 404 TIGRFAM TIGR00937 2A51: chromate efflux transporter 14 390 4.8E-74 T 23-10-2018 IPR014047 Chromate transporter, long chain CDG60_13500 60c174145dd47de075a1448d8121c4b6 404 Pfam PF02417 Chromate transporter 9 174 2.2E-27 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG60_13500 60c174145dd47de075a1448d8121c4b6 404 Pfam PF02417 Chromate transporter 238 392 3.5E-29 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG60_00775 c9554c302a52a05459ba92fc469d06cb 335 Gene3D G3DSA:3.40.190.170 37 315 1.4E-11 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG60_02845 fd36b5888e421e2500b83f2786789176 232 SUPERFAMILY SSF46689 19 90 1.85E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_02845 fd36b5888e421e2500b83f2786789176 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 77 2.9E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_02845 fd36b5888e421e2500b83f2786789176 232 Gene3D G3DSA:1.10.357.10 27 221 1.5E-18 T 23-10-2018 CDG60_11360 86c71a0d593bd561ef3419e9befbac75 239 SUPERFAMILY SSF55166 100 231 5.1E-15 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_11360 86c71a0d593bd561ef3419e9befbac75 239 Pfam PF08291 Peptidase M15 140 176 3.8E-5 T 23-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 CDG60_06865 18dab16c2087f1b6d6e7291b2fc9651d 270 Gene3D G3DSA:3.20.10.10 125 262 2.8E-35 T 23-10-2018 CDG60_06865 18dab16c2087f1b6d6e7291b2fc9651d 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 6 261 2.8E-67 T 23-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CDG60_06865 18dab16c2087f1b6d6e7291b2fc9651d 270 Gene3D G3DSA:3.30.470.10 3 110 2.3E-22 T 23-10-2018 CDG60_06865 18dab16c2087f1b6d6e7291b2fc9651d 270 Pfam PF01063 Amino-transferase class IV 25 241 1.6E-41 T 23-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CDG60_06865 18dab16c2087f1b6d6e7291b2fc9651d 270 SUPERFAMILY SSF56752 4 259 1.7E-51 T 23-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CDG60_05445 6039521b525bb8522f853c5c59673f7f 193 Pfam PF03550 Outer membrane lipoprotein LolB 42 192 1.8E-38 T 23-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CDG60_05445 6039521b525bb8522f853c5c59673f7f 193 Gene3D G3DSA:2.50.20.10 23 192 1.7E-33 T 23-10-2018 CDG60_05445 6039521b525bb8522f853c5c59673f7f 193 SUPERFAMILY SSF89392 21 192 3.92E-34 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDG60_05445 6039521b525bb8522f853c5c59673f7f 193 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 41 191 1.8E-28 T 23-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CDG60_16625 0d4debbf08a21b3e3b6ebe7841be3c24 501 Gene3D G3DSA:3.40.50.150 271 495 7.2E-32 T 23-10-2018 CDG60_16625 0d4debbf08a21b3e3b6ebe7841be3c24 501 SUPERFAMILY SSF103473 10 188 9.68E-6 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_16625 0d4debbf08a21b3e3b6ebe7841be3c24 501 SUPERFAMILY SSF53335 234 423 6.01E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_16625 0d4debbf08a21b3e3b6ebe7841be3c24 501 Pfam PF01564 Spermine/spermidine synthase domain 278 396 3.6E-10 T 23-10-2018 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 Pfam PF07690 Major Facilitator Superfamily 8 252 3.1E-38 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 Gene3D G3DSA:1.20.1250.20 1 387 2.4E-71 T 23-10-2018 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 SUPERFAMILY SSF103473 3 387 7.59E-67 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 101 122 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 131 153 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 159 179 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 74 98 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 217 234 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 364 383 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 299 319 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 43 62 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 246 266 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 334 357 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_00040 aa080ee55c6137586ccfd4d21bae477a 395 PRINTS PR01035 Tetracycline resistance protein signature 274 295 1.9E-110 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG60_01995 02332794b0de1e37cb099156edd1aebf 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 1.3E-63 T 23-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CDG60_01995 02332794b0de1e37cb099156edd1aebf 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 354 9.0E-103 T 23-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CDG60_16705 497c16696cf46b8edc4c8ca5358a5474 355 Pfam PF04536 TPM domain 95 218 6.8E-37 T 23-10-2018 IPR007621 TPM domain CDG60_16705 497c16696cf46b8edc4c8ca5358a5474 355 Gene3D G3DSA:3.10.310.50 84 226 1.6E-46 T 23-10-2018 CDG60_08275 4058a57a65c369120d0b688baa5b03f9 226 SUPERFAMILY SSF51366 3 224 3.46E-72 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG60_08275 4058a57a65c369120d0b688baa5b03f9 226 Gene3D G3DSA:3.20.20.70 1 225 1.9E-82 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_08275 4058a57a65c369120d0b688baa5b03f9 226 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 4 222 1.1E-61 T 23-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_08275 4058a57a65c369120d0b688baa5b03f9 226 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 3 221 1.4E-50 T 23-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_08275 4058a57a65c369120d0b688baa5b03f9 226 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 54 67 - T 23-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_08275 4058a57a65c369120d0b688baa5b03f9 226 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 226 34.962 T 23-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_08275 4058a57a65c369120d0b688baa5b03f9 226 SMART SM00934 2 222 2.3E-96 T 23-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_05670 8da277e0e1c6273f2f8c874f03e1cb3c 556 Gene3D G3DSA:1.50.10.10 211 439 4.0E-8 T 23-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 CDG60_05670 8da277e0e1c6273f2f8c874f03e1cb3c 556 SUPERFAMILY SSF48208 227 423 4.82E-12 T 23-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 CDG60_04970 93f186264f0135a2b2d1ad76df3cefb4 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 200 1.6E-57 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 CDG60_04970 93f186264f0135a2b2d1ad76df3cefb4 205 Gene3D G3DSA:3.90.870.10 2 205 1.5E-57 T 23-10-2018 CDG60_04970 93f186264f0135a2b2d1ad76df3cefb4 205 Pfam PF01300 Telomere recombination 22 197 3.6E-40 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 CDG60_04970 93f186264f0135a2b2d1ad76df3cefb4 205 SUPERFAMILY SSF55821 4 203 7.94E-57 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG60_13515 e32f2b3474420df8f7f891081f5347d2 235 Gene3D G3DSA:3.40.109.10 2 230 7.2E-65 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_13515 e32f2b3474420df8f7f891081f5347d2 235 SUPERFAMILY SSF55469 10 232 2.22E-47 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_13515 e32f2b3474420df8f7f891081f5347d2 235 Pfam PF00881 Nitroreductase family 13 208 7.2E-35 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG60_12775 830782748a652ce3b5fb35ae726d93b9 198 Pfam PF01553 Acyltransferase 29 139 6.3E-11 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_12775 830782748a652ce3b5fb35ae726d93b9 198 SMART SM00563 29 147 2.4E-18 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_12775 830782748a652ce3b5fb35ae726d93b9 198 SUPERFAMILY SSF69593 29 144 1.83E-13 T 23-10-2018 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 Gene3D G3DSA:3.40.1500.10 1 313 2.8E-138 T 23-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PIRSF PIRSF000166 1 310 7.6E-122 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 Pfam PF01218 Coproporphyrinogen III oxidase 11 309 1.6E-121 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 6 284 50.521 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 SUPERFAMILY SSF102886 7 309 2.75E-127 T 23-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 173 197 - T 23-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PRINTS PR00073 Coprogen oxidase signature 132 154 1.9E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PRINTS PR00073 Coprogen oxidase signature 97 121 1.9E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PRINTS PR00073 Coprogen oxidase signature 55 76 1.9E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PRINTS PR00073 Coprogen oxidase signature 241 268 1.9E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PRINTS PR00073 Coprogen oxidase signature 38 54 1.9E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PRINTS PR00073 Coprogen oxidase signature 169 198 1.9E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_16170 a6649f3d85de988fba15a4c9a3f53fc3 313 PRINTS PR00073 Coprogen oxidase signature 269 295 1.9E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG60_07220 06605984a37bd10c93f18c5d6b25407a 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 2.0E-43 T 23-10-2018 IPR004480 Monothiol glutaredoxin-related CDG60_07220 06605984a37bd10c93f18c5d6b25407a 113 SUPERFAMILY SSF52833 7 107 3.78E-33 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_07220 06605984a37bd10c93f18c5d6b25407a 113 PIRSF PIRSF005894 2 110 6.2E-46 T 23-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CDG60_07220 06605984a37bd10c93f18c5d6b25407a 113 Pfam PF00462 Glutaredoxin 21 85 1.4E-17 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDG60_07220 06605984a37bd10c93f18c5d6b25407a 113 Gene3D G3DSA:3.40.30.10 6 108 6.9E-30 T 23-10-2018 CDG60_13475 61aa836d3c0bf7c390c53972c6461764 406 SUPERFAMILY SSF103473 9 396 1.7E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_13475 61aa836d3c0bf7c390c53972c6461764 406 Gene3D G3DSA:1.20.1250.20 8 396 1.0E-49 T 23-10-2018 CDG60_13475 61aa836d3c0bf7c390c53972c6461764 406 Pfam PF07690 Major Facilitator Superfamily 23 361 2.5E-43 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_17880 dd42fb4bd956861969e5e72d34f73e32 453 SUPERFAMILY SSF103473 12 431 1.83E-81 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_17880 dd42fb4bd956861969e5e72d34f73e32 453 Gene3D G3DSA:1.20.1250.20 19 432 1.4E-73 T 23-10-2018 CDG60_17880 dd42fb4bd956861969e5e72d34f73e32 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_17880 dd42fb4bd956861969e5e72d34f73e32 453 Pfam PF00083 Sugar (and other) transporter 46 430 9.6E-34 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG60_10100 a591a31367c5867990baab1008a88caa 483 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 224 406 4.5E-34 T 23-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CDG60_10100 a591a31367c5867990baab1008a88caa 483 Gene3D G3DSA:3.30.70.1230 218 412 5.7E-64 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_10100 a591a31367c5867990baab1008a88caa 483 SMART SM00044 191 388 8.0E-17 T 23-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CDG60_10100 a591a31367c5867990baab1008a88caa 483 SUPERFAMILY SSF55073 223 407 6.75E-55 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_13980 369066eda10569a8d446edc399b53833 386 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 54 386 1.5E-12 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG60_13980 369066eda10569a8d446edc399b53833 386 Gene3D G3DSA:2.40.160.60 27 386 1.3E-30 T 23-10-2018 CDG60_13980 369066eda10569a8d446edc399b53833 386 SUPERFAMILY SSF56935 22 386 4.45E-49 T 23-10-2018 CDG60_00205 57a4dc3f4e0f91b6a4ade39f2deeaca1 345 Gene3D G3DSA:3.40.50.300 123 338 6.7E-54 T 23-10-2018 CDG60_00205 57a4dc3f4e0f91b6a4ade39f2deeaca1 345 Gene3D G3DSA:3.30.450.90 8 118 2.1E-23 T 23-10-2018 CDG60_00205 57a4dc3f4e0f91b6a4ade39f2deeaca1 345 Pfam PF00437 Type II/IV secretion system protein 17 316 3.2E-57 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG60_00205 57a4dc3f4e0f91b6a4ade39f2deeaca1 345 SUPERFAMILY SSF52540 15 320 1.51E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00205 57a4dc3f4e0f91b6a4ade39f2deeaca1 345 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 17 328 5.5E-91 T 23-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 SUPERFAMILY SSF54909 63 151 2.28E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 Gene3D G3DSA:3.30.70.920 56 140 4.2E-23 T 23-10-2018 CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 1.1E-19 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 2.7E-18 T 23-10-2018 CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.4E-14 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.4E-14 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.4E-14 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 SUPERFAMILY SSF46785 3 62 3.65E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 SMART SM00344 3 112 5.8E-37 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG60_04290 8f008db44269c9055484b4f7f2e267c3 156 Gene3D G3DSA:1.10.10.10 4 54 9.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 3.1E-18 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 157 2.0E-16 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Gene3D G3DSA:2.40.110.10 161 287 3.7E-29 T 23-10-2018 CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Gene3D G3DSA:1.20.140.10 288 464 8.7E-42 T 23-10-2018 CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Gene3D G3DSA:1.10.540.10 34 159 4.7E-20 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 SUPERFAMILY SSF56645 37 280 6.81E-62 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 598 9.2E-29 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 28 1.1E-8 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 457 1.4E-21 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG60_16190 e016615fc369c2d3dc175b06b5adf5b3 607 SUPERFAMILY SSF47203 287 477 3.87E-45 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG60_05365 0d8a20685cb2c63066993d4c1c8cdbd5 202 Pfam PF09335 SNARE associated Golgi protein 30 160 2.8E-25 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG60_16260 8174fe8e90727b4ad6502a57b68cf768 432 SUPERFAMILY SSF56112 93 304 6.52E-23 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_16260 8174fe8e90727b4ad6502a57b68cf768 432 Pfam PF03109 ABC1 family 110 228 1.2E-32 T 23-10-2018 IPR004147 UbiB domain CDG60_11400 d2ef554ff5e5491d3b7d6fa35b6d8be0 248 SMART SM00382 35 220 5.2E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_11400 d2ef554ff5e5491d3b7d6fa35b6d8be0 248 SUPERFAMILY SSF52540 11 244 4.5E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11400 d2ef554ff5e5491d3b7d6fa35b6d8be0 248 Pfam PF00005 ABC transporter 26 173 3.2E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_11400 d2ef554ff5e5491d3b7d6fa35b6d8be0 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_11400 d2ef554ff5e5491d3b7d6fa35b6d8be0 248 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 11 247 7.8E-120 T 23-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CDG60_11400 d2ef554ff5e5491d3b7d6fa35b6d8be0 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 243 8.2E-8 T 23-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDG60_11400 d2ef554ff5e5491d3b7d6fa35b6d8be0 248 Gene3D G3DSA:3.40.50.300 9 248 9.4E-69 T 23-10-2018 CDG60_17500 2ac9bb7fcaf611c1bc3cd22bfd824d1b 443 Pfam PF07819 PGAP1-like protein 153 375 3.0E-28 T 23-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 CDG60_17500 2ac9bb7fcaf611c1bc3cd22bfd824d1b 443 SUPERFAMILY SSF53474 156 373 2.29E-20 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_17500 2ac9bb7fcaf611c1bc3cd22bfd824d1b 443 Gene3D G3DSA:3.40.50.1820 158 416 2.1E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_01635 080515a1e584960a5920c57ee25b1f15 119 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 62 116 5.0E-10 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG60_01635 080515a1e584960a5920c57ee25b1f15 119 Gene3D G3DSA:3.10.450.160 42 119 5.8E-16 T 23-10-2018 CDG60_01635 080515a1e584960a5920c57ee25b1f15 119 Pfam PF11776 Nickel/cobalt transporter regulator 65 114 5.7E-15 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG60_09640 c4f5ef64d9cba219fd5a8c985e88f86c 1359 Pfam PF01464 Transglycosylase SLT domain 713 800 4.5E-11 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_09640 c4f5ef64d9cba219fd5a8c985e88f86c 1359 SUPERFAMILY SSF53955 711 806 9.38E-17 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_09640 c4f5ef64d9cba219fd5a8c985e88f86c 1359 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 148 209 8.1E-11 T 23-10-2018 IPR013491 Caudovirus, tape measure, N-terminal CDG60_09640 c4f5ef64d9cba219fd5a8c985e88f86c 1359 Gene3D G3DSA:1.10.530.10 707 835 2.2E-13 T 23-10-2018 CDG60_02640 8f326bcd70907036fd011115db75835f 472 Gene3D G3DSA:3.40.50.300 226 472 3.4E-93 T 23-10-2018 CDG60_02640 8f326bcd70907036fd011115db75835f 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 19 225 1.9E-21 T 23-10-2018 IPR022488 Polyphosphate kinase-2-related CDG60_02640 8f326bcd70907036fd011115db75835f 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 255 471 4.2E-79 T 23-10-2018 IPR022488 Polyphosphate kinase-2-related CDG60_02640 8f326bcd70907036fd011115db75835f 472 SUPERFAMILY SSF52540 280 470 7.24E-26 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02640 8f326bcd70907036fd011115db75835f 472 Gene3D G3DSA:3.40.50.300 4 225 2.0E-41 T 23-10-2018 CDG60_01325 18a9de2c009a2550b7fab5e280ae3153 551 SUPERFAMILY SSF52540 129 380 1.85E-10 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01325 18a9de2c009a2550b7fab5e280ae3153 551 Pfam PF13401 AAA domain 127 275 7.6E-28 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_01325 18a9de2c009a2550b7fab5e280ae3153 551 Gene3D G3DSA:1.10.10.960 501 551 1.3E-8 T 23-10-2018 CDG60_01325 18a9de2c009a2550b7fab5e280ae3153 551 Pfam PF11426 Tn7 transposition regulator TnsC 505 547 1.3E-8 T 23-10-2018 IPR021542 Tn7 transposition regulator TnsC CDG60_01325 18a9de2c009a2550b7fab5e280ae3153 551 Gene3D G3DSA:3.40.50.300 116 284 8.2E-11 T 23-10-2018 CDG60_15395 605f8b94efab422ea3876cfeb5945e58 142 Pfam PF04273 Putative phosphatase (DUF442) 32 132 3.2E-19 T 23-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CDG60_15395 605f8b94efab422ea3876cfeb5945e58 142 Gene3D G3DSA:3.90.190.10 17 141 8.2E-23 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG60_01755 63ebcf9fc8f6cd5c01ec716aa878f6c7 416 Pfam PF13449 Esterase-like activity of phytase 72 390 4.3E-55 T 23-10-2018 IPR027372 Phytase-like domain CDG60_05500 96b4ad706e3c1f45a9b8393efaa293e8 158 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 23-10-2018 IPR020081 SsrA-binding protein, conserved site CDG60_05500 96b4ad706e3c1f45a9b8393efaa293e8 158 SUPERFAMILY SSF74982 9 139 9.02E-49 T 23-10-2018 IPR023620 Small protein B CDG60_05500 96b4ad706e3c1f45a9b8393efaa293e8 158 Gene3D G3DSA:2.40.280.10 7 136 3.6E-45 T 23-10-2018 IPR023620 Small protein B CDG60_05500 96b4ad706e3c1f45a9b8393efaa293e8 158 Pfam PF01668 SmpB protein 15 157 1.8E-55 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG60_05500 96b4ad706e3c1f45a9b8393efaa293e8 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 5.3E-50 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG60_05500 96b4ad706e3c1f45a9b8393efaa293e8 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 68.579 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG60_05500 96b4ad706e3c1f45a9b8393efaa293e8 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 8.0E-62 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 2.1E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 2.1E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 2.1E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 2.1E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 401 2.7E-116 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 Gene3D G3DSA:3.10.290.10 329 402 8.9E-6 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 5 402 45.677 T 23-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 Gene3D G3DSA:1.10.240.10 221 328 5.9E-31 T 23-10-2018 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 Gene3D G3DSA:3.40.50.620 7 220 2.1E-75 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 Pfam PF00579 tRNA synthetases class I (W and Y) 33 313 5.9E-77 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 SUPERFAMILY SSF52374 8 311 3.07E-95 T 23-10-2018 CDG60_00810 7691bd4b03cfa82af7012976172dcf78 404 SUPERFAMILY SSF55174 327 402 4.27E-9 T 23-10-2018 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PIRSF PIRSF000724 1 396 2.9E-127 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 Pfam PF00162 Phosphoglycerate kinase 6 383 4.7E-138 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 8.9E-80 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 Gene3D G3DSA:3.40.50.1260 165 383 6.9E-158 T 23-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 Gene3D G3DSA:3.40.50.1260 10 389 6.9E-158 T 23-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 38.102 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_07935 d99c7c1ca054231efb8848dd4f9222b5 396 SUPERFAMILY SSF53748 2 392 4.59E-138 T 23-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG60_04170 ec772a6eddbbd99b0bd5eb5139022a23 142 PIRSF PIRSF005276 5 142 4.7E-52 T 23-10-2018 IPR007481 Stringent starvation protein B CDG60_04170 ec772a6eddbbd99b0bd5eb5139022a23 142 Gene3D G3DSA:2.30.30.220 4 131 1.6E-49 T 23-10-2018 IPR036760 SspB-like superfamily CDG60_04170 ec772a6eddbbd99b0bd5eb5139022a23 142 Pfam PF04386 Stringent starvation protein B 11 129 2.5E-35 T 23-10-2018 IPR007481 Stringent starvation protein B CDG60_04170 ec772a6eddbbd99b0bd5eb5139022a23 142 SUPERFAMILY SSF101738 7 114 8.63E-47 T 23-10-2018 IPR036760 SspB-like superfamily CDG60_04945 18f87e8d19037de893bb69d83338c695 388 Gene3D G3DSA:3.10.290.10 1 58 2.4E-19 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 Gene3D G3DSA:3.30.70.580 68 235 2.5E-48 T 23-10-2018 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 Gene3D G3DSA:3.30.70.1560 134 217 2.5E-48 T 23-10-2018 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 Pfam PF01479 S4 domain 4 47 4.0E-10 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 Pfam PF00849 RNA pseudouridylate synthase 67 199 3.6E-15 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 SMART SM00363 3 64 2.2E-8 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 SUPERFAMILY SSF55120 66 235 4.56E-41 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 5.9E-52 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG60_04945 18f87e8d19037de893bb69d83338c695 388 SUPERFAMILY SSF55174 5 94 3.97E-16 T 23-10-2018 CDG60_12325 10d4ae3a69dc1c47f67583dac88c90c8 104 SMART SM00507 40 91 7.2E-10 T 23-10-2018 IPR003615 HNH nuclease CDG60_12325 10d4ae3a69dc1c47f67583dac88c90c8 104 Gene3D G3DSA:3.30.40.60 31 103 2.0E-11 T 23-10-2018 CDG60_12325 10d4ae3a69dc1c47f67583dac88c90c8 104 Pfam PF01844 HNH endonuclease 53 96 6.0E-13 T 23-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CDG60_06405 bdd9017693e5d76f982f6337a47b62e0 131 Gene3D G3DSA:2.30.30.40 72 131 2.2E-5 T 23-10-2018 CDG60_05755 c1cfb2b3976b1008cd00d668d974c037 179 Gene3D G3DSA:2.60.40.1190 27 178 6.8E-6 T 23-10-2018 CDG60_10940 cd19344d5bfb0e9102723358fe85cd5d 648 Gene3D G3DSA:3.40.640.10 275 535 8.3E-163 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_10940 cd19344d5bfb0e9102723358fe85cd5d 648 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 246 642 2.6E-164 T 23-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDG60_10940 cd19344d5bfb0e9102723358fe85cd5d 648 Pfam PF00266 Aminotransferase class-V 264 633 1.2E-142 T 23-10-2018 IPR000192 Aminotransferase class V domain CDG60_10940 cd19344d5bfb0e9102723358fe85cd5d 648 SUPERFAMILY SSF53383 243 642 1.29E-120 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_10940 cd19344d5bfb0e9102723358fe85cd5d 648 Gene3D G3DSA:3.90.1150.10 247 636 8.3E-163 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 Hamap MF_00235 Adenylate kinase [adk]. 1 216 49.569 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 SUPERFAMILY SSF52540 1 189 4.52E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.4E-16 T 23-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 PRINTS PR00094 Adenylate kinase signature 32 46 1.4E-30 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 PRINTS PR00094 Adenylate kinase signature 81 97 1.4E-30 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 PRINTS PR00094 Adenylate kinase signature 156 171 1.4E-30 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 PRINTS PR00094 Adenylate kinase signature 4 17 1.4E-30 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 PRINTS PR00094 Adenylate kinase signature 173 187 1.4E-30 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 198 1.8E-71 T 23-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 Pfam PF00406 Adenylate kinase 5 185 8.1E-53 T 23-10-2018 CDG60_12730 f0056417967b3756cfcb3cca26d2537a 217 Gene3D G3DSA:3.40.50.300 1 217 3.9E-78 T 23-10-2018 CDG60_07515 b9ae0b297b0c98c0beb13c1a256711ff 176 SUPERFAMILY SSF53056 9 166 1.23E-40 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDG60_07515 b9ae0b297b0c98c0beb13c1a256711ff 176 Gene3D G3DSA:3.40.1050.10 2 170 2.0E-43 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDG60_07515 b9ae0b297b0c98c0beb13c1a256711ff 176 SMART SM00947 13 162 1.6E-39 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG60_07515 b9ae0b297b0c98c0beb13c1a256711ff 176 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 25 32 - T 23-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG60_07515 b9ae0b297b0c98c0beb13c1a256711ff 176 Pfam PF00484 Carbonic anhydrase 20 155 6.7E-31 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG60_07515 b9ae0b297b0c98c0beb13c1a256711ff 176 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 62 82 - T 23-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG60_09220 1713369b544ea8cb5c767e25b29a7a1c 334 Pfam PF00487 Fatty acid desaturase 58 313 9.1E-35 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG60_08650 8c1114ea41bcc44f802727e628ec9b80 122 Gene3D G3DSA:3.30.40.60 15 116 4.3E-11 T 23-10-2018 CDG60_08650 8c1114ea41bcc44f802727e628ec9b80 122 SMART SM00507 54 108 5.6E-15 T 23-10-2018 IPR003615 HNH nuclease CDG60_08650 8c1114ea41bcc44f802727e628ec9b80 122 Pfam PF01844 HNH endonuclease 67 111 1.8E-13 T 23-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CDG60_07090 671d6db2239d80eb25d4ba38a4b1569c 510 Gene3D G3DSA:3.40.640.10 113 372 6.2E-127 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_07090 671d6db2239d80eb25d4ba38a4b1569c 510 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 83 428 3.9E-60 T 23-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CDG60_07090 671d6db2239d80eb25d4ba38a4b1569c 510 SUPERFAMILY SSF53383 20 496 1.79E-115 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_07090 671d6db2239d80eb25d4ba38a4b1569c 510 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 - T 23-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 CDG60_07090 671d6db2239d80eb25d4ba38a4b1569c 510 Gene3D G3DSA:3.90.1150.170 47 487 6.2E-127 T 23-10-2018 CDG60_18025 b2e5b0878d9afe922bacb6f0877ceb87 95 Gene3D G3DSA:3.40.630.30 2 95 1.5E-25 T 23-10-2018 CDG60_18025 b2e5b0878d9afe922bacb6f0877ceb87 95 SUPERFAMILY SSF55729 3 93 1.01E-24 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_18025 b2e5b0878d9afe922bacb6f0877ceb87 95 Pfam PF14542 GCN5-related N-acetyl-transferase 14 92 2.4E-22 T 23-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 Gene3D G3DSA:3.40.430.10 2 170 3.1E-50 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 PIRSF PIRSF000194 3 170 4.5E-53 T 23-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 23-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 SUPERFAMILY SSF53597 6 170 5.5E-49 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 PRINTS PR00070 Dihydrofolate reductase signature 104 118 2.3E-15 T 23-10-2018 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 PRINTS PR00070 Dihydrofolate reductase signature 33 41 2.3E-15 T 23-10-2018 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 PRINTS PR00070 Dihydrofolate reductase signature 19 29 2.3E-15 T 23-10-2018 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 PRINTS PR00070 Dihydrofolate reductase signature 46 57 2.3E-15 T 23-10-2018 CDG60_15715 b89786ae269692c0db0a2d20d50bdda7 170 Pfam PF00186 Dihydrofolate reductase 8 170 2.4E-53 T 23-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CDG60_10135 fc63722b2f4ff1a6e14d6df44f45338f 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 3.0E-28 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_10135 fc63722b2f4ff1a6e14d6df44f45338f 89 Pfam PF01649 Ribosomal protein S20 2 84 3.6E-26 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_10135 fc63722b2f4ff1a6e14d6df44f45338f 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.755 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_10135 fc63722b2f4ff1a6e14d6df44f45338f 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 4.0E-21 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_10135 fc63722b2f4ff1a6e14d6df44f45338f 89 Gene3D G3DSA:1.20.58.110 1 87 1.8E-27 T 23-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_10135 fc63722b2f4ff1a6e14d6df44f45338f 89 SUPERFAMILY SSF46992 3 86 1.23E-30 T 23-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_05465 3737cc9faa9b7098a70c9b45cc4dd6b1 339 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 251 34.271 T 23-10-2018 IPR017689 Outer membrane protein assembly factor BamD CDG60_05465 3737cc9faa9b7098a70c9b45cc4dd6b1 339 Gene3D G3DSA:1.25.40.10 39 260 2.1E-51 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_05465 3737cc9faa9b7098a70c9b45cc4dd6b1 339 SUPERFAMILY SSF48452 42 142 2.42E-9 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_05465 3737cc9faa9b7098a70c9b45cc4dd6b1 339 Pfam PF13525 Outer membrane lipoprotein 39 243 7.1E-57 T 23-10-2018 IPR039565 Outer membrane lipoprotein BamD-like CDG60_05465 3737cc9faa9b7098a70c9b45cc4dd6b1 339 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 253 5.4E-76 T 23-10-2018 IPR017689 Outer membrane protein assembly factor BamD CDG60_17265 9283eb9ca778112548264e2ed8f9f573 237 SUPERFAMILY SSF75217 73 234 1.48E-35 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_17265 9283eb9ca778112548264e2ed8f9f573 237 Gene3D G3DSA:3.40.1280.10 5 236 2.5E-33 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_17265 9283eb9ca778112548264e2ed8f9f573 237 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 230 7.3E-33 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG60_17265 9283eb9ca778112548264e2ed8f9f573 237 PIRSF PIRSF015601 1 236 5.6E-49 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG60_17265 9283eb9ca778112548264e2ed8f9f573 237 Pfam PF04452 RNA methyltransferase 21 233 2.2E-46 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 2.8E-37 T 23-10-2018 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 2.8E-37 T 23-10-2018 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 2.8E-37 T 23-10-2018 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 334 2.8E-37 T 23-10-2018 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 2.8E-37 T 23-10-2018 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 350 2.8E-37 T 23-10-2018 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 Gene3D G3DSA:3.30.70.2450 191 272 2.3E-85 T 23-10-2018 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 Pfam PF01494 FAD binding domain 12 348 1.0E-79 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 SUPERFAMILY SSF51905 12 384 6.98E-65 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_13435 dc55bf3bdcb0d3a76d289e83745e0eee 538 Gene3D G3DSA:3.50.50.60 14 347 2.3E-85 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_07945 bc10d36bcf70eee15eac850c824b7256 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 3.5E-93 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG60_07945 bc10d36bcf70eee15eac850c824b7256 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 344 4.1E-192 T 23-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CDG60_07945 bc10d36bcf70eee15eac850c824b7256 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 5.8E-90 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG60_07945 bc10d36bcf70eee15eac850c824b7256 345 Gene3D G3DSA:3.20.20.70 1 345 1.6E-151 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_07945 bc10d36bcf70eee15eac850c824b7256 345 SUPERFAMILY SSF51569 3 328 6.45E-104 T 23-10-2018 CDG60_07945 bc10d36bcf70eee15eac850c824b7256 345 PIRSF PIRSF001359 1 329 3.2E-80 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG60_07945 bc10d36bcf70eee15eac850c824b7256 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG60_02565 65b4d5b9b5a7065500059fe603a0969c 173 Pfam PF01899 Na+/H+ ion antiporter subunit 18 164 3.3E-38 T 23-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CDG60_02565 65b4d5b9b5a7065500059fe603a0969c 173 PIRSF PIRSF019239 7 169 2.8E-46 T 23-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CDG60_01385 25b0c4a18b2849db810c9ee128483bbf 131 Pfam PF04247 Invasion gene expression up-regulator, SirB 7 128 2.6E-13 T 23-10-2018 IPR007360 Invasion gene expression up-regulator, SirB CDG60_14285 24278db01ce891f286d2427dd1808bee 467 SUPERFAMILY SSF51679 1 438 1.16E-124 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_14285 24278db01ce891f286d2427dd1808bee 467 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 434 7.3E-167 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CDG60_14285 24278db01ce891f286d2427dd1808bee 467 PIRSF PIRSF000337 2 448 8.0E-142 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CDG60_14285 24278db01ce891f286d2427dd1808bee 467 Pfam PF00296 Luciferase-like monooxygenase 23 392 7.4E-51 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG60_14285 24278db01ce891f286d2427dd1808bee 467 Gene3D G3DSA:3.20.20.30 1 457 4.8E-144 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG60_06900 1b55c8a8592d5e2875b44cd079bd7ab0 290 SUPERFAMILY SSF52768 5 280 2.54E-47 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily CDG60_06900 1b55c8a8592d5e2875b44cd079bd7ab0 290 Gene3D G3DSA:3.40.800.20 4 285 9.5E-32 T 23-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDG60_06900 1b55c8a8592d5e2875b44cd079bd7ab0 290 Pfam PF00850 Histone deacetylase domain 16 271 4.3E-26 T 23-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDG60_06685 22f6be852ad2747b2ffecc351980ca60 362 Gene3D G3DSA:3.40.718.10 1 362 1.9E-143 T 23-10-2018 CDG60_06685 22f6be852ad2747b2ffecc351980ca60 362 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.6E-86 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG60_06685 22f6be852ad2747b2ffecc351980ca60 362 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 357 1.2E-166 T 23-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 CDG60_06685 22f6be852ad2747b2ffecc351980ca60 362 SUPERFAMILY SSF53659 3 357 2.5E-114 T 23-10-2018 CDG60_06685 22f6be852ad2747b2ffecc351980ca60 362 SMART SM01329 6 355 3.1E-178 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG60_06685 22f6be852ad2747b2ffecc351980ca60 362 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CDG60_07730 2d4ec98582a13db55f3ac3807a2affca 121 Pfam PF04241 Protein of unknown function (DUF423) 16 102 9.2E-25 T 23-10-2018 IPR006696 Protein of unknown function DUF423 CDG60_11510 a1ac8015a1bbccab334bd75aefa3cbee 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 61 4.7E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_11510 a1ac8015a1bbccab334bd75aefa3cbee 199 SUPERFAMILY SSF46689 5 81 2.1E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_11510 a1ac8015a1bbccab334bd75aefa3cbee 199 Gene3D G3DSA:1.10.357.10 11 166 2.1E-13 T 23-10-2018 CDG60_11510 a1ac8015a1bbccab334bd75aefa3cbee 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.8E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_11510 a1ac8015a1bbccab334bd75aefa3cbee 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_15610 0c5d31a98e203bd7db25f7815173eb8f 227 Gene3D G3DSA:2.60.120.620 1 178 2.4E-43 T 23-10-2018 CDG60_15610 0c5d31a98e203bd7db25f7815173eb8f 227 SMART SM00702 1 177 1.2E-16 T 23-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CDG60_15610 0c5d31a98e203bd7db25f7815173eb8f 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 45.814 T 23-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 CDG60_15610 0c5d31a98e203bd7db25f7815173eb8f 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 7.2E-14 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CDG60_15610 0c5d31a98e203bd7db25f7815173eb8f 227 SUPERFAMILY SSF51197 4 178 1.37E-7 T 23-10-2018 CDG60_15610 0c5d31a98e203bd7db25f7815173eb8f 227 Gene3D G3DSA:4.10.860.20 180 227 1.1E-20 T 23-10-2018 CDG60_11320 aadcb98c39bb4dd010761c00cdd94041 352 SUPERFAMILY SSF46689 290 339 5.82E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_11320 aadcb98c39bb4dd010761c00cdd94041 352 Pfam PF14525 AraC-binding-like domain 39 214 3.3E-37 T 23-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CDG60_11320 aadcb98c39bb4dd010761c00cdd94041 352 SMART SM00342 253 337 9.3E-29 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_11320 aadcb98c39bb4dd010761c00cdd94041 352 SUPERFAMILY SSF46689 238 287 4.03E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_11320 aadcb98c39bb4dd010761c00cdd94041 352 Pfam PF12833 Helix-turn-helix domain 259 338 3.7E-27 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_11320 aadcb98c39bb4dd010761c00cdd94041 352 Gene3D G3DSA:1.10.10.60 238 340 6.1E-33 T 23-10-2018 CDG60_11620 8b99e96de96cc7cfa308f86dd4ce6451 401 Pfam PF07759 Protein of unknown function (DUF1615) 51 395 4.7E-120 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 CDG60_11620 8b99e96de96cc7cfa308f86dd4ce6451 401 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 24 395 7.0E-164 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Gene3D G3DSA:2.160.20.60 1222 1491 5.7E-97 T 23-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Gene3D G3DSA:3.60.20.10 25 558 0.0 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Pfam PF00310 Glutamine amidotransferases class-II 25 439 2.1E-162 T 23-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 SUPERFAMILY SSF51395 460 1201 7.33E-245 T 23-10-2018 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Gene3D G3DSA:3.20.20.70 496 1182 0.0 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Gene3D G3DSA:3.20.20.70 444 804 0.0 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 SUPERFAMILY SSF69336 1223 1478 3.53E-87 T 23-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Pfam PF01645 Conserved region in glutamate synthase 806 1167 8.3E-148 T 23-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Pfam PF01493 GXGXG motif 1248 1435 1.6E-76 T 23-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 Pfam PF04898 Glutamate synthase central domain 470 749 1.3E-103 T 23-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CDG60_16725 cf9056a15d7080a72e415e42a0008234 1493 SUPERFAMILY SSF56235 25 443 1.47E-141 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_00495 c9378212c4ee24cf116c04b208772e65 234 Gene3D G3DSA:3.30.420.10 67 210 1.8E-5 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_00495 c9378212c4ee24cf116c04b208772e65 234 Pfam PF13610 DDE domain 74 212 7.1E-50 T 23-10-2018 IPR032874 DDE domain CDG60_00495 c9378212c4ee24cf116c04b208772e65 234 SUPERFAMILY SSF53098 72 191 9.36E-9 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_14990 0c29c32b5b22ca269b7427ea418678e0 181 SUPERFAMILY SSF52540 3 106 1.05E-14 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_14990 0c29c32b5b22ca269b7427ea418678e0 181 Gene3D G3DSA:3.40.50.300 1 159 1.1E-14 T 23-10-2018 CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 SUPERFAMILY SSF51735 161 333 2.49E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 Gene3D G3DSA:3.40.50.720 174 312 2.8E-148 T 23-10-2018 CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 SUPERFAMILY SSF50129 1 184 3.54E-70 T 23-10-2018 IPR011032 GroES-like superfamily CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 3.5E-25 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 SUPERFAMILY SSF50129 318 369 4.33E-11 T 23-10-2018 IPR011032 GroES-like superfamily CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 Gene3D G3DSA:3.90.180.10 6 364 2.8E-148 T 23-10-2018 CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 SMART SM00829 12 367 1.3E-4 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 6.6E-219 T 23-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CDG60_09345 0ce149fe4356c1ec9a39febf8237d493 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 3.7E-25 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG60_16045 053984685121532b8ba816de02c5e892 142 Pfam PF02082 Transcriptional regulator 1 81 1.1E-17 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG60_16045 053984685121532b8ba816de02c5e892 142 SUPERFAMILY SSF46785 2 130 4.41E-28 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_16045 053984685121532b8ba816de02c5e892 142 Gene3D G3DSA:1.10.10.10 1 136 7.2E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_16045 053984685121532b8ba816de02c5e892 142 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 127 1.4E-23 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG60_09665 f3472656a4ef78c636db89d6a4a7f735 147 Gene3D G3DSA:2.30.30.40 16 79 2.4E-6 T 23-10-2018 CDG60_01255 3aa54d321d0e857f61218c6f30227710 108 SUPERFAMILY SSF46785 9 102 2.91E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01255 3aa54d321d0e857f61218c6f30227710 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 4.4E-11 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_01255 3aa54d321d0e857f61218c6f30227710 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 4.4E-11 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_01255 3aa54d321d0e857f61218c6f30227710 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 4.4E-11 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_01255 3aa54d321d0e857f61218c6f30227710 108 Pfam PF01022 Bacterial regulatory protein, arsR family 27 72 1.0E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_01255 3aa54d321d0e857f61218c6f30227710 108 SMART SM00418 20 95 2.0E-17 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG60_01255 3aa54d321d0e857f61218c6f30227710 108 Gene3D G3DSA:1.10.10.10 1 99 7.9E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14620 2754bdcc2c51ba8c540d2c130f638b49 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 224 6.6E-23 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG60_14620 2754bdcc2c51ba8c540d2c130f638b49 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 6 294 1.1E-87 T 23-10-2018 IPR010099 Epimerase family protein SDR39U1 CDG60_14620 2754bdcc2c51ba8c540d2c130f638b49 301 Pfam PF08338 Domain of unknown function (DUF1731) 251 297 7.1E-18 T 23-10-2018 IPR013549 Domain of unknown function DUF1731 CDG60_14620 2754bdcc2c51ba8c540d2c130f638b49 301 SUPERFAMILY SSF51735 5 255 3.56E-39 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_14620 2754bdcc2c51ba8c540d2c130f638b49 301 Gene3D G3DSA:3.40.50.720 6 300 2.1E-70 T 23-10-2018 CDG60_09470 1ac2b47b788ad626d7ca80ff86f57a63 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 322 1.9E-97 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_09470 1ac2b47b788ad626d7ca80ff86f57a63 334 PIRSF PIRSF000267 1 334 1.7E-91 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_09470 1ac2b47b788ad626d7ca80ff86f57a63 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 210 5.1E-44 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.9E-48 T 23-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 Gene3D G3DSA:3.90.1170.10 1 137 2.8E-55 T 23-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 SUPERFAMILY SSF54686 1 134 1.7E-54 T 23-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.575 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15955 1bd4608725a449af92cbc11323b3f424 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.9E-57 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_14360 e25c64adbeafbaa9de6b1335c147e469 227 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CDG60_14360 e25c64adbeafbaa9de6b1335c147e469 227 SUPERFAMILY SSF100950 2 220 7.18E-75 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG60_14360 e25c64adbeafbaa9de6b1335c147e469 227 Gene3D G3DSA:3.40.1080.10 1 218 1.3E-74 T 23-10-2018 CDG60_14360 e25c64adbeafbaa9de6b1335c147e469 227 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 8.0E-117 T 23-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CDG60_14360 e25c64adbeafbaa9de6b1335c147e469 227 Pfam PF01144 Coenzyme A transferase 8 218 7.9E-69 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG60_14360 e25c64adbeafbaa9de6b1335c147e469 227 SMART SM00882 6 219 9.0E-77 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG60_00785 8efa69bd76006412ff1791cfd82c74a8 331 Gene3D G3DSA:3.40.190.170 46 243 1.7E-16 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 PIRSF PIRSF000332 240 410 7.9E-10 T 23-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 PIRSF PIRSF000332 1 231 4.3E-33 T 23-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 Gene3D G3DSA:3.50.50.60 172 271 9.1E-165 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 Pfam PF00743 Flavin-binding monooxygenase-like 243 380 5.7E-9 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 Pfam PF00743 Flavin-binding monooxygenase-like 3 225 5.2E-27 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 SUPERFAMILY SSF51905 1 239 3.7E-49 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 Gene3D G3DSA:3.50.50.60 3 415 9.1E-165 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_10635 482417bbb57396aa9b0dfc0254eeee7e 453 SUPERFAMILY SSF51905 253 385 1.04E-8 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_15180 909c81361b2940cf04348c9c78a0c03a 183 SMART SM00014 65 173 4.3E-14 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG60_15180 909c81361b2940cf04348c9c78a0c03a 183 SUPERFAMILY SSF48317 12 178 1.7E-36 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG60_15180 909c81361b2940cf04348c9c78a0c03a 183 Gene3D G3DSA:1.20.144.10 8 180 5.4E-19 T 23-10-2018 CDG60_15180 909c81361b2940cf04348c9c78a0c03a 183 Pfam PF01569 PAP2 superfamily 65 178 1.7E-21 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG60_14595 dbb0d72b0843c132acb768827c773ad0 508 Gene3D G3DSA:1.20.1250.20 271 501 1.9E-18 T 23-10-2018 CDG60_14595 dbb0d72b0843c132acb768827c773ad0 508 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 493 9.2E-134 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CDG60_14595 dbb0d72b0843c132acb768827c773ad0 508 SUPERFAMILY SSF103473 13 498 5.75E-67 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_14595 dbb0d72b0843c132acb768827c773ad0 508 Gene3D G3DSA:1.20.1720.10 19 258 2.1E-45 T 23-10-2018 CDG60_14595 dbb0d72b0843c132acb768827c773ad0 508 Pfam PF07690 Major Facilitator Superfamily 22 416 5.1E-53 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_14505 3aa968c2cc01b1177d7e70ddfcb85fb0 590 Pfam PF10592 AIPR protein 242 552 6.4E-45 T 23-10-2018 IPR018891 Abortive bacteriophage infection, resistance CDG60_17410 d76c00290731dca15d63eeb57448b5d6 216 Pfam PF00156 Phosphoribosyl transferase domain 53 163 1.5E-13 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG60_17410 d76c00290731dca15d63eeb57448b5d6 216 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 216 32.65 T 23-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_17410 d76c00290731dca15d63eeb57448b5d6 216 SUPERFAMILY SSF53271 11 199 2.23E-46 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_17410 d76c00290731dca15d63eeb57448b5d6 216 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 191 1.0E-56 T 23-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG60_17410 d76c00290731dca15d63eeb57448b5d6 216 Gene3D G3DSA:3.40.50.2020 8 216 4.9E-74 T 23-10-2018 CDG60_05860 e15e5a10ddcfb4858a36da89697858fc 257 SUPERFAMILY SSF56300 2 235 1.34E-41 T 23-10-2018 CDG60_05860 e15e5a10ddcfb4858a36da89697858fc 257 Gene3D G3DSA:3.60.21.10 1 248 1.3E-29 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG60_05860 e15e5a10ddcfb4858a36da89697858fc 257 Pfam PF00149 Calcineurin-like phosphoesterase 2 189 6.5E-14 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG60_13995 3c3aff45bec431b4153ea446da226824 243 SUPERFAMILY SSF52402 15 201 9.21E-47 T 23-10-2018 CDG60_13995 3c3aff45bec431b4153ea446da226824 243 PIRSF PIRSF000857 6 243 1.9E-78 T 23-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CDG60_13995 3c3aff45bec431b4153ea446da226824 243 Gene3D G3DSA:3.40.50.620 9 228 2.4E-67 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_13995 3c3aff45bec431b4153ea446da226824 243 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 213 4.1E-48 T 23-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CDG60_13995 3c3aff45bec431b4153ea446da226824 243 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 42 237 9.7E-79 T 23-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 CDG60_12120 af3a5c128b782a225a481aaca08ed932 417 Pfam PF00464 Serine hydroxymethyltransferase 7 385 9.4E-182 T 23-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG60_12120 af3a5c128b782a225a481aaca08ed932 417 SUPERFAMILY SSF53383 4 415 1.65E-182 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_12120 af3a5c128b782a225a481aaca08ed932 417 Gene3D G3DSA:3.40.640.10 36 288 3.4E-186 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_12120 af3a5c128b782a225a481aaca08ed932 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG60_12120 af3a5c128b782a225a481aaca08ed932 417 Gene3D G3DSA:3.90.1150.10 9 393 3.4E-186 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_12120 af3a5c128b782a225a481aaca08ed932 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 416 53.074 T 23-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG60_12120 af3a5c128b782a225a481aaca08ed932 417 PIRSF PIRSF000412 2 417 1.2E-168 T 23-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG60_15025 8d119a8be92a1ee3b75d1b6e0dba2b91 141 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 2 136 0.001 T 23-10-2018 IPR020143 Uncharacterised protein family, RP436 CDG60_15025 8d119a8be92a1ee3b75d1b6e0dba2b91 141 Pfam PF09335 SNARE associated Golgi protein 18 135 1.5E-10 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG60_16620 65554fa1e3df6a7c97702492e852aa14 205 Pfam PF07690 Major Facilitator Superfamily 14 201 4.8E-9 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_16620 65554fa1e3df6a7c97702492e852aa14 205 SUPERFAMILY SSF103473 11 202 3.27E-13 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_16620 65554fa1e3df6a7c97702492e852aa14 205 Gene3D G3DSA:1.20.1250.20 4 202 3.0E-13 T 23-10-2018 CDG60_16325 4eeb3d47c52373227545717ca1525966 413 Gene3D G3DSA:1.20.1720.10 22 395 1.5E-67 T 23-10-2018 CDG60_16325 4eeb3d47c52373227545717ca1525966 413 Pfam PF07690 Major Facilitator Superfamily 28 360 2.3E-38 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_16325 4eeb3d47c52373227545717ca1525966 413 SUPERFAMILY SSF103473 11 394 4.71E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_16325 4eeb3d47c52373227545717ca1525966 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_09415 4781fc63b7f451e8cf20699421affa68 253 SMART SM00953 74 212 1.4E-18 T 23-10-2018 IPR014914 RES domain CDG60_09415 4781fc63b7f451e8cf20699421affa68 253 Pfam PF08808 RES domain 64 201 5.0E-23 T 23-10-2018 IPR014914 RES domain CDG60_16980 cc9a9de0578e629ab578f8de4be35f42 132 SMART SM00530 17 72 4.9E-8 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_16980 cc9a9de0578e629ab578f8de4be35f42 132 Pfam PF01381 Helix-turn-helix 18 72 3.8E-7 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_16980 cc9a9de0578e629ab578f8de4be35f42 132 Gene3D G3DSA:1.10.260.40 13 77 7.7E-14 T 23-10-2018 CDG60_16980 cc9a9de0578e629ab578f8de4be35f42 132 SUPERFAMILY SSF47413 15 76 1.41E-10 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_09010 917ace62684d6b16d42c60c24bf5dc37 138 Pfam PF04143 Sulphur transport 69 126 7.7E-10 T 23-10-2018 IPR007272 Sulphur transport domain CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 SUPERFAMILY SSF46565 1 68 1.96E-13 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 82 153 1.8E-14 T 23-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 160 17.607 T 23-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 Gene3D G3DSA:1.10.287.110 1 74 1.7E-16 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 SUPERFAMILY SSF47144 76 161 2.09E-19 T 23-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 158 3.4E-27 T 23-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 Gene3D G3DSA:1.20.1280.20 75 161 9.0E-20 T 23-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 Pfam PF00226 DnaJ domain 11 65 6.1E-8 T 23-10-2018 IPR001623 DnaJ domain CDG60_10085 c8eb874f277616e29ccc6ed3dc8f0492 171 SMART SM00271 1 61 5.3E-7 T 23-10-2018 IPR001623 DnaJ domain CDG60_08300 eb34b183b895a19c501deb138a88107b 240 Gene3D G3DSA:3.90.550.10 1 210 8.1E-17 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_08300 eb34b183b895a19c501deb138a88107b 240 Pfam PF00535 Glycosyl transferase family 2 12 128 5.7E-8 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDG60_08300 eb34b183b895a19c501deb138a88107b 240 SUPERFAMILY SSF53448 9 190 4.01E-18 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 Gene3D G3DSA:3.40.50.720 1 255 4.2E-67 T 23-10-2018 CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 SUPERFAMILY SSF51735 7 248 9.78E-68 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 245 2.4E-58 T 23-10-2018 CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.2E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.2E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.2E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.2E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.2E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.2E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.0E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.0E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11340 34195aa8b4ef3c8ed1db954d9ff095ba 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.0E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_02790 02aef65a98d937645e6ebd0da107995c 337 Hamap MF_00323 Ferrochelatase [hemH]. 7 328 35.236 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG60_02790 02aef65a98d937645e6ebd0da107995c 337 SUPERFAMILY SSF53800 6 331 1.64E-96 T 23-10-2018 CDG60_02790 02aef65a98d937645e6ebd0da107995c 337 Gene3D G3DSA:3.40.50.1400 171 309 1.3E-93 T 23-10-2018 CDG60_02790 02aef65a98d937645e6ebd0da107995c 337 Gene3D G3DSA:3.40.50.1400 8 329 1.3E-93 T 23-10-2018 CDG60_02790 02aef65a98d937645e6ebd0da107995c 337 ProSitePatterns PS00534 Ferrochelatase signature. 197 216 - T 23-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG60_02790 02aef65a98d937645e6ebd0da107995c 337 Pfam PF00762 Ferrochelatase 8 326 2.3E-102 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG60_02790 02aef65a98d937645e6ebd0da107995c 337 TIGRFAM TIGR00109 hemH: ferrochelatase 5 328 4.1E-91 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG60_09495 00eeaf25ef3dd8c6f17f9f052a0d9e59 402 Pfam PF07690 Major Facilitator Superfamily 25 244 8.3E-30 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_09495 00eeaf25ef3dd8c6f17f9f052a0d9e59 402 SUPERFAMILY SSF103473 1 394 1.57E-59 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_09495 00eeaf25ef3dd8c6f17f9f052a0d9e59 402 Gene3D G3DSA:1.20.1250.20 6 393 1.3E-51 T 23-10-2018 CDG60_13910 9bc0c8212c9cbc1bf1d7ea2429505e33 439 Gene3D G3DSA:3.30.160.390 6 92 9.9E-25 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG60_13910 9bc0c8212c9cbc1bf1d7ea2429505e33 439 Gene3D G3DSA:1.10.150.130 93 211 1.1E-24 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_13910 9bc0c8212c9cbc1bf1d7ea2429505e33 439 Gene3D G3DSA:1.10.443.10 212 401 7.6E-13 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_13910 9bc0c8212c9cbc1bf1d7ea2429505e33 439 SUPERFAMILY SSF56349 103 393 1.06E-42 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_13910 9bc0c8212c9cbc1bf1d7ea2429505e33 439 Pfam PF00589 Phage integrase family 227 390 7.4E-10 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_13910 9bc0c8212c9cbc1bf1d7ea2429505e33 439 ProSitePatterns PS00018 EF-hand calcium-binding domain. 409 421 - T 23-10-2018 IPR018247 EF-Hand 1, calcium-binding site CDG60_13910 9bc0c8212c9cbc1bf1d7ea2429505e33 439 Pfam PF13356 Arm DNA-binding domain 8 89 2.0E-15 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG60_07000 fe9f614923398adbe3ef87be48887af2 408 SUPERFAMILY SSF53383 4 392 1.25E-115 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_07000 fe9f614923398adbe3ef87be48887af2 408 Gene3D G3DSA:3.40.640.10 64 286 2.7E-133 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_07000 fe9f614923398adbe3ef87be48887af2 408 Gene3D G3DSA:3.90.1150.10 27 387 2.7E-133 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_07000 fe9f614923398adbe3ef87be48887af2 408 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 23-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDG60_07000 fe9f614923398adbe3ef87be48887af2 408 Pfam PF00155 Aminotransferase class I and II 32 385 4.7E-73 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_11410 3e526c0eaf3bae3d9ece5534ad5a7361 181 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 179 1.6E-31 T 23-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CDG60_11410 3e526c0eaf3bae3d9ece5534ad5a7361 181 Gene3D G3DSA:2.60.450.10 57 181 2.1E-7 T 23-10-2018 CDG60_11410 3e526c0eaf3bae3d9ece5534ad5a7361 181 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 178 3.4E-34 T 23-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CDG60_07270 805f17fa05b145ea9ff589d77eaf7af1 698 Pfam PF02554 Carbon starvation protein CstA 38 414 3.9E-170 T 23-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CDG60_07270 805f17fa05b145ea9ff589d77eaf7af1 698 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 597 2.8E-33 T 23-10-2018 IPR025299 CstA, C-terminal domain CDG60_13380 086f6d6a87e8b2a3d15f33ef548a8b2f 320 Pfam PF00892 EamA-like transporter family 36 162 7.3E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_13380 086f6d6a87e8b2a3d15f33ef548a8b2f 320 Pfam PF00892 EamA-like transporter family 176 309 3.0E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_13380 086f6d6a87e8b2a3d15f33ef548a8b2f 320 SUPERFAMILY SSF103481 219 314 1.57E-9 T 23-10-2018 CDG60_13380 086f6d6a87e8b2a3d15f33ef548a8b2f 320 SUPERFAMILY SSF103481 64 162 2.09E-11 T 23-10-2018 CDG60_11165 e19d521e2f1efcf638eb92e4417d347e 401 Gene3D G3DSA:1.20.1250.20 215 400 8.0E-19 T 23-10-2018 CDG60_11165 e19d521e2f1efcf638eb92e4417d347e 401 Gene3D G3DSA:1.20.1250.20 5 198 2.2E-32 T 23-10-2018 CDG60_11165 e19d521e2f1efcf638eb92e4417d347e 401 SUPERFAMILY SSF103473 8 397 1.31E-63 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_11165 e19d521e2f1efcf638eb92e4417d347e 401 Pfam PF07690 Major Facilitator Superfamily 19 358 3.5E-38 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_15270 71102630ef4c32aa7b04688f88173594 244 Pfam PF12811 Bax inhibitor 1 like 5 241 2.8E-61 T 23-10-2018 IPR010539 Protein of unknown function UCP009160 CDG60_15270 71102630ef4c32aa7b04688f88173594 244 PIRSF PIRSF009160 1 244 2.9E-75 T 23-10-2018 IPR010539 Protein of unknown function UCP009160 CDG60_11930 febce28af70e494ae73f7a9c4ff574eb 331 Pfam PF02885 Glycosyl transferase family, helical bundle domain 25 80 4.0E-16 T 23-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_11930 febce28af70e494ae73f7a9c4ff574eb 331 Pfam PF00591 Glycosyl transferase family, a/b domain 108 326 1.4E-10 T 23-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_11930 febce28af70e494ae73f7a9c4ff574eb 331 Gene3D G3DSA:3.40.1030.10 85 331 4.7E-63 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_11930 febce28af70e494ae73f7a9c4ff574eb 331 SUPERFAMILY SSF52418 87 330 1.1E-61 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_11930 febce28af70e494ae73f7a9c4ff574eb 331 SUPERFAMILY SSF47648 23 81 2.09E-15 T 23-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG60_11930 febce28af70e494ae73f7a9c4ff574eb 331 Gene3D G3DSA:1.20.970.10 14 82 6.3E-26 T 23-10-2018 CDG60_08550 1f337bc7b57d883ae4cd33e8fdf3e9c5 59 SUPERFAMILY SSF47413 16 52 4.87E-7 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_08550 1f337bc7b57d883ae4cd33e8fdf3e9c5 59 Pfam PF14549 DNA-binding transcriptional regulator Cro 17 51 4.7E-9 T 23-10-2018 CDG60_08550 1f337bc7b57d883ae4cd33e8fdf3e9c5 59 Gene3D G3DSA:1.10.260.40 1 58 3.5E-8 T 23-10-2018 CDG60_04805 dd0a325cb6a44f4690889bcc631624f4 134 PRINTS PR00502 NUDIX hydrolase family signature 34 48 8.1E-6 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_04805 dd0a325cb6a44f4690889bcc631624f4 134 PRINTS PR00502 NUDIX hydrolase family signature 48 63 8.1E-6 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG60_04805 dd0a325cb6a44f4690889bcc631624f4 134 SUPERFAMILY SSF55811 6 113 7.18E-27 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_04805 dd0a325cb6a44f4690889bcc631624f4 134 Gene3D G3DSA:3.90.79.10 9 129 1.2E-26 T 23-10-2018 CDG60_04805 dd0a325cb6a44f4690889bcc631624f4 134 Pfam PF00293 NUDIX domain 10 113 3.0E-19 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_09300 d7bc8a859ffa62a1bb1f015770bdf639 149 Pfam PF01575 MaoC like domain 10 113 4.3E-12 T 23-10-2018 IPR002539 MaoC-like dehydratase domain CDG60_09300 d7bc8a859ffa62a1bb1f015770bdf639 149 Gene3D G3DSA:3.10.129.10 1 147 1.6E-39 T 23-10-2018 CDG60_09300 d7bc8a859ffa62a1bb1f015770bdf639 149 SUPERFAMILY SSF54637 2 145 5.34E-32 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_08520 2daacc82cb685f99973f6a6062d016fd 339 SUPERFAMILY SSF56349 61 334 6.18E-53 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_08520 2daacc82cb685f99973f6a6062d016fd 339 Pfam PF00589 Phage integrase family 178 326 4.1E-15 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_08520 2daacc82cb685f99973f6a6062d016fd 339 Gene3D G3DSA:1.10.150.130 58 166 1.6E-11 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_08520 2daacc82cb685f99973f6a6062d016fd 339 Gene3D G3DSA:1.10.443.10 167 337 3.4E-24 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_17830 117a0f27172a59df672697774edbc60c 609 Gene3D G3DSA:3.50.30.80 421 572 4.1E-54 T 23-10-2018 CDG60_17830 117a0f27172a59df672697774edbc60c 609 SUPERFAMILY SSF52016 421 608 1.57E-59 T 23-10-2018 CDG60_17830 117a0f27172a59df672697774edbc60c 609 Pfam PF00920 Dehydratase family 34 605 3.8E-223 T 23-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG60_17830 117a0f27172a59df672697774edbc60c 609 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG60_17830 117a0f27172a59df672697774edbc60c 609 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG60_17830 117a0f27172a59df672697774edbc60c 609 SUPERFAMILY SSF143975 3 420 4.18E-136 T 23-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG60_17830 117a0f27172a59df672697774edbc60c 609 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.772 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG60_17830 117a0f27172a59df672697774edbc60c 609 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 608 5.0E-254 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 SUPERFAMILY SSF54913 1 112 5.08E-46 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 83 103 2.0E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 23 41 2.0E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 52 75 2.0E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 2 17 2.0E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 SMART SM00938 4 105 8.4E-67 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 Gene3D G3DSA:3.30.70.120 1 112 1.0E-46 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG60_01935 b061b3e4c16ca8ac5542667d38b1a6bc 112 PIRSF PIRSF039144 1 112 3.3E-55 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG60_00290 f1414e8c7d9c19a3b68462fb9ca9c62d 157 Gene3D G3DSA:1.10.472.120 16 148 1.3E-7 T 23-10-2018 CDG60_15670 ee41cbdec09b381011e32074694ae2b2 144 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 2.6E-22 T 23-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CDG60_15670 ee41cbdec09b381011e32074694ae2b2 144 Pfam PF02416 mttA/Hcf106 family 4 50 9.7E-9 T 23-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CDG60_15670 ee41cbdec09b381011e32074694ae2b2 144 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 14.448 T 23-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CDG60_15670 ee41cbdec09b381011e32074694ae2b2 144 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.7E-16 T 23-10-2018 CDG60_15670 ee41cbdec09b381011e32074694ae2b2 144 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.7E-16 T 23-10-2018 CDG60_15670 ee41cbdec09b381011e32074694ae2b2 144 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.7E-16 T 23-10-2018 CDG60_03875 b1d40e77c146acda5850836927e9f338 143 Pfam PF11776 Nickel/cobalt transporter regulator 110 140 1.7E-7 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG60_03875 b1d40e77c146acda5850836927e9f338 143 Gene3D G3DSA:3.10.450.160 80 143 1.1E-7 T 23-10-2018 CDG60_16535 5d5bb0fbc83559462594572f94aa8fa2 169 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 7 135 7.7E-23 T 23-10-2018 IPR013362 Pilus modification type IV, PilV CDG60_15910 b24f9ce39f1149e932c2c8d601b47efe 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 9.3E-41 T 23-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_15910 b24f9ce39f1149e932c2c8d601b47efe 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 25.832 T 23-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15910 b24f9ce39f1149e932c2c8d601b47efe 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 3.0E-39 T 23-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15910 b24f9ce39f1149e932c2c8d601b47efe 116 SUPERFAMILY SSF53137 4 114 3.49E-50 T 23-10-2018 CDG60_15910 b24f9ce39f1149e932c2c8d601b47efe 116 Gene3D G3DSA:3.30.420.100 2 116 2.8E-40 T 23-10-2018 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 SUPERFAMILY SSF51412 3 478 4.97E-125 T 23-10-2018 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 Gene3D G3DSA:3.20.20.70 2 487 8.7E-206 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 474 8.5E-159 T 23-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 SUPERFAMILY SSF54631 93 202 4.17E-27 T 23-10-2018 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 487 82.305 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 23-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 SMART SM01240 7 474 0.0 T 23-10-2018 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 PIRSF PIRSF000130 1 488 7.4E-201 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 Pfam PF00571 CBS domain 157 204 3.2E-4 T 23-10-2018 IPR000644 CBS domain CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 Pfam PF00571 CBS domain 89 137 6.9E-11 T 23-10-2018 IPR000644 CBS domain CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.6E-186 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 SMART SM00116 157 205 1.8E-5 T 23-10-2018 IPR000644 CBS domain CDG60_17320 71a55ab700434afcfcb911f1500338f1 488 SMART SM00116 96 143 1.0E-8 T 23-10-2018 IPR000644 CBS domain CDG60_15925 a331b403cba1bdbe49a25eac6824b79d 101 Gene3D G3DSA:4.10.830.10 41 101 5.8E-22 T 23-10-2018 CDG60_15925 a331b403cba1bdbe49a25eac6824b79d 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 23-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15925 a331b403cba1bdbe49a25eac6824b79d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.4E-25 T 23-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15925 a331b403cba1bdbe49a25eac6824b79d 101 SUPERFAMILY SSF57716 2 101 5.35E-39 T 23-10-2018 CDG60_15925 a331b403cba1bdbe49a25eac6824b79d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.922 T 23-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CDG60_05980 73f4874ade859ba3a7a23df8fbc62bf3 203 SUPERFAMILY SSF46689 17 87 8.48E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_05980 73f4874ade859ba3a7a23df8fbc62bf3 203 SUPERFAMILY SSF48498 91 202 3.11E-15 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_05980 73f4874ade859ba3a7a23df8fbc62bf3 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 70 7.9E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_05980 73f4874ade859ba3a7a23df8fbc62bf3 203 Gene3D G3DSA:1.10.357.10 11 203 2.8E-42 T 23-10-2018 CDG60_05980 73f4874ade859ba3a7a23df8fbc62bf3 203 Pfam PF13305 WHG domain 100 180 8.7E-13 T 23-10-2018 IPR025996 WHG domain CDG60_07460 2ca1fc9090d5d312300de6bd00e74dc8 203 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 19 198 7.7E-56 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG60_07460 2ca1fc9090d5d312300de6bd00e74dc8 203 Pfam PF02669 K+-transporting ATPase, c chain 19 198 5.6E-65 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG60_07460 2ca1fc9090d5d312300de6bd00e74dc8 203 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 15 199 30.192 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG60_07460 2ca1fc9090d5d312300de6bd00e74dc8 203 PIRSF PIRSF001296 14 202 1.2E-65 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG60_05105 19b2cc3769ae9cb5b3057c84bcca3be6 305 Gene3D G3DSA:3.40.1090.10 23 137 3.1E-26 T 23-10-2018 CDG60_05105 19b2cc3769ae9cb5b3057c84bcca3be6 305 Pfam PF01734 Patatin-like phospholipase 42 198 4.0E-26 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDG60_05105 19b2cc3769ae9cb5b3057c84bcca3be6 305 SUPERFAMILY SSF52151 34 279 2.25E-56 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG60_17595 11225c158e641d6b515cbaf897fe2ea2 283 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 16 283 43.335 T 23-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CDG60_17595 11225c158e641d6b515cbaf897fe2ea2 283 Pfam PF02666 Phosphatidylserine decarboxylase 69 280 1.1E-59 T 23-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CDG60_17595 11225c158e641d6b515cbaf897fe2ea2 283 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 55 281 2.9E-70 T 23-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CDG60_15155 fb812cfef24471c98603b8b2f643b95f 262 Pfam PF13464 Domain of unknown function (DUF4115) 189 260 4.9E-11 T 23-10-2018 IPR025194 Domain of unknown function DUF4115 CDG60_15155 fb812cfef24471c98603b8b2f643b95f 262 Gene3D G3DSA:1.10.260.40 16 105 4.4E-21 T 23-10-2018 CDG60_15155 fb812cfef24471c98603b8b2f643b95f 262 Pfam PF13413 Helix-turn-helix domain 29 89 1.3E-17 T 23-10-2018 CDG60_02110 de737154958bf06cd0fe22608e2147b1 447 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 442 2.5E-82 T 23-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 CDG60_02110 de737154958bf06cd0fe22608e2147b1 447 SUPERFAMILY SSF56954 2 433 3.01E-86 T 23-10-2018 CDG60_02110 de737154958bf06cd0fe22608e2147b1 447 Gene3D G3DSA:1.20.1600.10 23 446 1.4E-99 T 23-10-2018 CDG60_02110 de737154958bf06cd0fe22608e2147b1 447 Pfam PF02321 Outer membrane efflux protein 25 219 9.2E-23 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_02110 de737154958bf06cd0fe22608e2147b1 447 Pfam PF02321 Outer membrane efflux protein 242 428 9.1E-32 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_10410 062db5e9d7b0c899dc561d61b77ab355 337 Gene3D G3DSA:3.90.1200.10 93 332 5.2E-66 T 23-10-2018 CDG60_10410 062db5e9d7b0c899dc561d61b77ab355 337 Pfam PF01636 Phosphotransferase enzyme family 23 243 1.9E-23 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG60_10410 062db5e9d7b0c899dc561d61b77ab355 337 Gene3D G3DSA:3.30.200.20 1 92 9.2E-25 T 23-10-2018 CDG60_10410 062db5e9d7b0c899dc561d61b77ab355 337 SUPERFAMILY SSF56112 6 305 3.94E-44 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_03445 382c739e12f3fb98f49783d5c53d6716 224 Pfam PF01553 Acyltransferase 49 170 3.4E-19 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_03445 382c739e12f3fb98f49783d5c53d6716 224 SMART SM00563 50 172 1.1E-18 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_03445 382c739e12f3fb98f49783d5c53d6716 224 SUPERFAMILY SSF69593 29 218 7.98E-26 T 23-10-2018 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 364 34.362 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 SUPERFAMILY SSF51717 15 208 1.41E-8 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 Pfam PF04551 GcpE protein 11 352 3.7E-132 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 Gene3D G3DSA:3.30.413.10 261 360 1.4E-26 T 23-10-2018 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 PIRSF PIRSF004640 1 363 7.8E-145 T 23-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 SUPERFAMILY SSF56014 264 352 1.19E-13 T 23-10-2018 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 351 3.5E-129 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG60_15150 b6342bd7c567e7be348b7192bf369ac7 373 Gene3D G3DSA:3.20.20.20 1 260 1.1E-103 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG60_05560 3d2958186d54eb571ef5554e2b0dcc66 318 Pfam PF10118 Predicted metal-dependent hydrolase 31 284 2.3E-62 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_05560 3d2958186d54eb571ef5554e2b0dcc66 318 PIRSF PIRSF007580 17 301 1.4E-51 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_05510 20703be977b85c01ba0f9c06b7413de1 87 Pfam PF00037 4Fe-4S binding domain 5 24 1.9E-6 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG60_05510 20703be977b85c01ba0f9c06b7413de1 87 Gene3D G3DSA:3.30.70.20 2 83 1.3E-31 T 23-10-2018 CDG60_05510 20703be977b85c01ba0f9c06b7413de1 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG60_05510 20703be977b85c01ba0f9c06b7413de1 87 SUPERFAMILY SSF54862 4 76 5.93E-19 T 23-10-2018 CDG60_06855 f245300b5e9a0b1e7119e7f262905b82 201 Pfam PF06821 Serine hydrolase 4 178 5.6E-54 T 23-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CDG60_06855 f245300b5e9a0b1e7119e7f262905b82 201 Gene3D G3DSA:3.40.50.1820 2 183 3.5E-47 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_06855 f245300b5e9a0b1e7119e7f262905b82 201 SUPERFAMILY SSF53474 4 179 2.08E-33 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04895 c2e7731709830a983a6c989dc95e3fa8 542 Pfam PF03929 PepSY-associated TM region 14 381 1.3E-58 T 23-10-2018 IPR005625 PepSY-associated TM protein CDG60_07680 666357e9b3ffe162872e46720fa84a2d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.1E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_07680 666357e9b3ffe162872e46720fa84a2d 296 Pfam PF03466 LysR substrate binding domain 89 290 3.6E-19 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_07680 666357e9b3ffe162872e46720fa84a2d 296 SUPERFAMILY SSF53850 90 294 2.17E-22 T 23-10-2018 CDG60_07680 666357e9b3ffe162872e46720fa84a2d 296 Gene3D G3DSA:3.40.190.290 94 292 7.1E-27 T 23-10-2018 CDG60_07680 666357e9b3ffe162872e46720fa84a2d 296 SUPERFAMILY SSF46785 2 82 1.9E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_07680 666357e9b3ffe162872e46720fa84a2d 296 Gene3D G3DSA:1.10.10.10 1 86 2.3E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04755 3f3433191fc2b8b47763726652f410ab 159 Pfam PF13673 Acetyltransferase (GNAT) domain 32 129 5.6E-13 T 23-10-2018 IPR000182 GNAT domain CDG60_04755 3f3433191fc2b8b47763726652f410ab 159 Gene3D G3DSA:3.40.630.30 9 157 9.0E-34 T 23-10-2018 CDG60_04755 3f3433191fc2b8b47763726652f410ab 159 SUPERFAMILY SSF55729 19 154 7.55E-21 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 Gene3D G3DSA:2.40.128.20 13 184 5.0E-52 T 23-10-2018 IPR012674 Calycin CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 ProSitePatterns PS00213 Lipocalin signature. 37 48 - T 23-10-2018 IPR022272 Lipocalin family conserved site CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 PRINTS PR01171 Bacterial lipocalin signature 36 50 5.0E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 PRINTS PR01171 Bacterial lipocalin signature 145 156 5.0E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 PRINTS PR01171 Bacterial lipocalin signature 130 138 5.0E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 PRINTS PR01171 Bacterial lipocalin signature 172 182 5.0E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 PIRSF PIRSF036893 2 184 2.1E-55 T 23-10-2018 IPR022271 Lipocalin, ApoD type CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 Pfam PF08212 Lipocalin-like domain 36 183 1.1E-48 T 23-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CDG60_08790 cea7dc261790a2689c609dbfafd57f04 184 SUPERFAMILY SSF50814 29 183 2.18E-43 T 23-10-2018 IPR012674 Calycin CDG60_12405 6b74720b949b01ee7f66d6ff393ad597 412 Gene3D G3DSA:1.10.150.130 101 215 3.1E-23 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG60_12405 6b74720b949b01ee7f66d6ff393ad597 412 Gene3D G3DSA:1.10.443.10 227 397 1.0E-12 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_12405 6b74720b949b01ee7f66d6ff393ad597 412 Gene3D G3DSA:3.30.160.390 6 100 4.4E-24 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG60_12405 6b74720b949b01ee7f66d6ff393ad597 412 SUPERFAMILY SSF56349 110 396 1.59E-52 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_12405 6b74720b949b01ee7f66d6ff393ad597 412 Pfam PF13356 Arm DNA-binding domain 8 98 4.4E-16 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG60_12405 6b74720b949b01ee7f66d6ff393ad597 412 Pfam PF00589 Phage integrase family 236 384 3.7E-10 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_00820 284444f3c2df6c5fda9ce448999a5f51 268 Pfam PF00005 ABC transporter 21 160 3.4E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_00820 284444f3c2df6c5fda9ce448999a5f51 268 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_00820 284444f3c2df6c5fda9ce448999a5f51 268 SMART SM00382 30 211 1.4E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_00820 284444f3c2df6c5fda9ce448999a5f51 268 SUPERFAMILY SSF52540 4 217 4.14E-60 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00820 284444f3c2df6c5fda9ce448999a5f51 268 Gene3D G3DSA:3.40.50.300 2 253 2.4E-57 T 23-10-2018 CDG60_14765 a7fa2db9f7895b1c6914792aa1db334f 554 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 27 553 6.1E-72 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG60_14765 a7fa2db9f7895b1c6914792aa1db334f 554 SUPERFAMILY SSF56935 30 552 2.31E-57 T 23-10-2018 CDG60_14765 a7fa2db9f7895b1c6914792aa1db334f 554 Gene3D G3DSA:2.40.160.60 118 554 3.0E-59 T 23-10-2018 CDG60_10430 748a0c5ce56513a5801ff4230ae4da36 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 28.703 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDG60_10430 748a0c5ce56513a5801ff4230ae4da36 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 295 2.4E-85 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDG60_10430 748a0c5ce56513a5801ff4230ae4da36 314 Pfam PF01715 IPP transferase 41 291 1.2E-78 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDG60_10430 748a0c5ce56513a5801ff4230ae4da36 314 SUPERFAMILY SSF52540 8 142 3.87E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10430 748a0c5ce56513a5801ff4230ae4da36 314 SUPERFAMILY SSF52540 6 234 3.38E-5 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10430 748a0c5ce56513a5801ff4230ae4da36 314 Gene3D G3DSA:1.10.20.140 114 186 1.4E-91 T 23-10-2018 CDG60_10430 748a0c5ce56513a5801ff4230ae4da36 314 Gene3D G3DSA:3.40.50.300 11 295 1.4E-91 T 23-10-2018 CDG60_16670 9a4ed7ac6fd793e02df21515e3445fd2 314 Pfam PF03869 Arc-like DNA binding domain 7 44 3.9E-9 T 23-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 CDG60_16670 9a4ed7ac6fd793e02df21515e3445fd2 314 SUPERFAMILY SSF47598 5 45 2.63E-10 T 23-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDG60_16670 9a4ed7ac6fd793e02df21515e3445fd2 314 Gene3D G3DSA:1.10.1220.10 4 46 1.2E-15 T 23-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDG60_01470 16df449cc9114318ff2a19e9176d927b 199 Pfam PF05036 Sporulation related domain 125 198 2.3E-16 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 CDG60_01470 16df449cc9114318ff2a19e9176d927b 199 Gene3D G3DSA:3.30.70.1070 119 199 6.0E-15 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG60_01470 16df449cc9114318ff2a19e9176d927b 199 SUPERFAMILY SSF110997 124 198 2.62E-14 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG60_15385 219b48c6e10e973160759af4fcc3421e 299 SUPERFAMILY SSF53474 4 296 1.29E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_15385 219b48c6e10e973160759af4fcc3421e 299 Pfam PF12146 Serine aminopeptidase, S33 32 259 6.3E-16 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG60_15385 219b48c6e10e973160759af4fcc3421e 299 Gene3D G3DSA:3.40.50.1820 14 275 4.7E-41 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_15385 219b48c6e10e973160759af4fcc3421e 299 Gene3D G3DSA:1.10.10.800 141 223 4.7E-41 T 23-10-2018 CDG60_10870 ac3544991eed060078e0144752bd7f77 259 Pfam PF10728 Domain of unknown function (DUF2520) 126 250 5.5E-30 T 23-10-2018 IPR018931 Domain of unknown function DUF2520 CDG60_10870 ac3544991eed060078e0144752bd7f77 259 Gene3D G3DSA:1.10.1040.20 156 256 1.4E-35 T 23-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily CDG60_10870 ac3544991eed060078e0144752bd7f77 259 Gene3D G3DSA:3.40.50.720 1 154 1.3E-33 T 23-10-2018 CDG60_10870 ac3544991eed060078e0144752bd7f77 259 SUPERFAMILY SSF48179 159 256 4.08E-24 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG60_10870 ac3544991eed060078e0144752bd7f77 259 Pfam PF10727 Rossmann-like domain 2 104 6.9E-5 T 23-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain CDG60_10870 ac3544991eed060078e0144752bd7f77 259 SUPERFAMILY SSF51735 2 157 3.67E-21 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_03275 88d2d30009400b637ce04d68b2cdc15d 149 SUPERFAMILY SSF69118 5 147 3.17E-36 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG60_03275 88d2d30009400b637ce04d68b2cdc15d 149 Pfam PF02627 Carboxymuconolactone decarboxylase family 11 95 2.0E-15 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG60_03275 88d2d30009400b637ce04d68b2cdc15d 149 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 81 2.0E-14 T 23-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG60_03275 88d2d30009400b637ce04d68b2cdc15d 149 Gene3D G3DSA:1.20.1290.10 1 148 5.7E-42 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG60_01515 d3f85c073f49278683fedff0bf7487b0 305 Pfam PF04261 Dyp-type peroxidase family 39 297 2.8E-72 T 23-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CDG60_01515 d3f85c073f49278683fedff0bf7487b0 305 SUPERFAMILY SSF54909 4 303 2.68E-88 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_01515 d3f85c073f49278683fedff0bf7487b0 305 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 296 4.9E-67 T 23-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CDG60_07760 ab46807aadd59fa37cd6eaebe11675a7 191 Gene3D G3DSA:3.40.109.10 8 186 7.7E-37 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_07760 ab46807aadd59fa37cd6eaebe11675a7 191 PIRSF PIRSF000232 4 191 9.1E-63 T 23-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CDG60_07760 ab46807aadd59fa37cd6eaebe11675a7 191 Pfam PF00881 Nitroreductase family 16 168 8.8E-24 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG60_07760 ab46807aadd59fa37cd6eaebe11675a7 191 SUPERFAMILY SSF55469 8 187 2.22E-33 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 PRINTS PR00721 Stomatin signature 131 154 7.6E-23 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 PRINTS PR00721 Stomatin signature 111 128 7.6E-23 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 PRINTS PR00721 Stomatin signature 174 195 7.6E-23 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 PRINTS PR00721 Stomatin signature 155 173 7.6E-23 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 PRINTS PR00721 Stomatin signature 76 97 7.6E-23 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 SUPERFAMILY SSF117892 52 186 9.02E-37 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 Pfam PF01145 SPFH domain / Band 7 family 25 195 2.1E-35 T 23-10-2018 IPR001107 Band 7 domain CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 Gene3D G3DSA:3.30.479.30 49 181 5.3E-37 T 23-10-2018 CDG60_05095 f86284b4087d3c8957c670c24ad2dfb8 284 SMART SM00244 21 179 9.2E-53 T 23-10-2018 IPR001107 Band 7 domain CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 85 5.7E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 5.7E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 5.7E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 Gene3D G3DSA:1.10.10.10 22 89 3.1E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 Gene3D G3DSA:3.40.640.10 108 473 1.0E-84 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 Pfam PF00155 Aminotransferase class I and II 133 399 3.5E-20 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 SMART SM00345 26 85 7.8E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 SUPERFAMILY SSF46785 19 89 6.39E-11 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_09455 c9d4de76ced7697fd66d032a22bd3757 489 SUPERFAMILY SSF53383 96 478 1.41E-63 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_03050 4ef88db3d3749ce545cd8e80cec8cb9d 340 SUPERFAMILY SSF46689 291 339 1.39E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_03050 4ef88db3d3749ce545cd8e80cec8cb9d 340 SMART SM00342 255 337 6.9E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_03050 4ef88db3d3749ce545cd8e80cec8cb9d 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 111 212 6.7E-6 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_03050 4ef88db3d3749ce545cd8e80cec8cb9d 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 3.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_03050 4ef88db3d3749ce545cd8e80cec8cb9d 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 3.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_03050 4ef88db3d3749ce545cd8e80cec8cb9d 340 Gene3D G3DSA:1.10.10.60 247 340 9.5E-21 T 23-10-2018 CDG60_03050 4ef88db3d3749ce545cd8e80cec8cb9d 340 Pfam PF12833 Helix-turn-helix domain 261 338 1.2E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 Hamap MF_00268 Protein RecA [recA]. 5 329 51.62 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.1E-171 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 Pfam PF00154 recA bacterial DNA recombination protein 7 268 1.7E-148 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 SUPERFAMILY SSF52540 3 267 4.84E-69 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 PRINTS PR00142 RecA protein signature 243 272 5.0E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 PRINTS PR00142 RecA protein signature 210 238 5.0E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 PRINTS PR00142 RecA protein signature 297 314 5.0E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 PRINTS PR00142 RecA protein signature 165 194 5.0E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 PRINTS PR00142 RecA protein signature 93 122 5.0E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 PRINTS PR00142 RecA protein signature 127 156 5.0E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 Gene3D G3DSA:3.40.50.300 26 267 4.2E-85 T 23-10-2018 CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 Gene3D G3DSA:3.30.250.10 269 327 6.3E-24 T 23-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 SUPERFAMILY SSF54752 269 325 2.09E-19 T 23-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 SMART SM00382 57 228 3.6E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_10170 50ebb1f4d409a7d3ce214dd246ca8f4f 348 ProSitePatterns PS00321 recA signature. 213 221 - T 23-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CDG60_04540 7b76eb07ed5c0f204f6acefa1c11f796 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_04540 7b76eb07ed5c0f204f6acefa1c11f796 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.6E-64 T 23-10-2018 IPR023798 Ribosomal protein S7 domain CDG60_04540 7b76eb07ed5c0f204f6acefa1c11f796 156 PIRSF PIRSF002122 3 156 1.9E-58 T 23-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CDG60_04540 7b76eb07ed5c0f204f6acefa1c11f796 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.0E-67 T 23-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CDG60_04540 7b76eb07ed5c0f204f6acefa1c11f796 156 Gene3D G3DSA:1.10.455.10 2 155 9.3E-59 T 23-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CDG60_04540 7b76eb07ed5c0f204f6acefa1c11f796 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.97 T 23-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CDG60_04540 7b76eb07ed5c0f204f6acefa1c11f796 156 SUPERFAMILY SSF47973 6 149 3.01E-59 T 23-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CDG60_09270 35a67e8f7b8f313949cf13be743961ae 576 TIGRFAM TIGR00815 sulP: sulfate permease 13 558 6.8E-125 T 23-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CDG60_09270 35a67e8f7b8f313949cf13be743961ae 576 Pfam PF00916 Sulfate permease family 26 406 1.5E-95 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDG60_09270 35a67e8f7b8f313949cf13be743961ae 576 SUPERFAMILY SSF52091 458 568 2.75E-15 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_09270 35a67e8f7b8f313949cf13be743961ae 576 Gene3D G3DSA:3.30.750.24 437 572 1.4E-26 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_09270 35a67e8f7b8f313949cf13be743961ae 576 Pfam PF01740 STAS domain 459 554 2.0E-16 T 23-10-2018 IPR002645 STAS domain CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 6.9E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.9E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 Gene3D G3DSA:3.30.700.10 11 148 2.8E-9 T 23-10-2018 CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 SUPERFAMILY SSF54523 11 84 2.2E-11 T 23-10-2018 CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 PRINTS PR00885 Bacterial general secretion pathway protein H signature 146 161 1.4E-9 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 PRINTS PR00885 Bacterial general secretion pathway protein H signature 21 35 1.4E-9 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG60_10340 b16de67c058b70870d5ac3d079ed3bdc 186 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 1.4E-9 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG60_03175 1655fb22b81e810e818c8599b532db35 335 Pfam PF12833 Helix-turn-helix domain 254 332 8.5E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_03175 1655fb22b81e810e818c8599b532db35 335 SMART SM00342 248 330 2.1E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_03175 1655fb22b81e810e818c8599b532db35 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 205 9.2E-35 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_03175 1655fb22b81e810e818c8599b532db35 335 Gene3D G3DSA:1.10.10.60 228 335 3.2E-25 T 23-10-2018 CDG60_03175 1655fb22b81e810e818c8599b532db35 335 SUPERFAMILY SSF46689 283 332 2.46E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17440 c86d6c5aeeb14593d925ad37d8c32ec9 400 SMART SM00267 219 391 1.8E-51 T 23-10-2018 IPR000160 GGDEF domain CDG60_17440 c86d6c5aeeb14593d925ad37d8c32ec9 400 SUPERFAMILY SSF55073 235 391 2.51E-45 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_17440 c86d6c5aeeb14593d925ad37d8c32ec9 400 Pfam PF00990 Diguanylate cyclase, GGDEF domain 231 387 4.6E-44 T 23-10-2018 IPR000160 GGDEF domain CDG60_17440 c86d6c5aeeb14593d925ad37d8c32ec9 400 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 388 1.0E-46 T 23-10-2018 IPR000160 GGDEF domain CDG60_17440 c86d6c5aeeb14593d925ad37d8c32ec9 400 Gene3D G3DSA:3.30.70.270 217 392 1.8E-53 T 23-10-2018 CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 Gene3D G3DSA:3.30.1330.30 1 78 3.0E-24 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 Pfam PF00588 SpoU rRNA Methylase family 98 241 2.2E-36 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 SUPERFAMILY SSF75217 70 248 1.7E-44 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 SMART SM00967 6 82 8.5E-17 T 23-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 248 38.125 T 23-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 247 5.3E-65 T 23-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 SUPERFAMILY SSF55315 3 78 8.83E-18 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 6.6E-18 T 23-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CDG60_02475 9954b1ebd7cd027cb2f8ff9e9d56fcd9 249 Gene3D G3DSA:3.40.1280.10 81 248 3.8E-51 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG60_06610 4a6edc57f5467392407b7ba00cb8656d 816 SUPERFAMILY SSF51126 12 375 6.91E-17 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor CDG60_06610 4a6edc57f5467392407b7ba00cb8656d 816 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 27 52 5.2E-12 T 23-10-2018 IPR026457 CSLREA domain CDG60_08185 4d454bac74bfca90b6a4bd5bfbd819a8 392 Pfam PF02684 Lipid-A-disaccharide synthetase 9 376 2.7E-104 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDG60_08185 4d454bac74bfca90b6a4bd5bfbd819a8 392 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 390 36.399 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDG60_08185 4d454bac74bfca90b6a4bd5bfbd819a8 392 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 387 5.3E-103 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDG60_08185 4d454bac74bfca90b6a4bd5bfbd819a8 392 SUPERFAMILY SSF53756 7 363 7.85E-27 T 23-10-2018 CDG60_11260 03c717dab90630a69d3d887b2569f028 288 SUPERFAMILY SSF51161 19 193 1.94E-58 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_11260 03c717dab90630a69d3d887b2569f028 288 Gene3D G3DSA:1.10.3130.10 5 85 6.9E-26 T 23-10-2018 CDG60_11260 03c717dab90630a69d3d887b2569f028 288 Pfam PF06426 Serine acetyltransferase, N-terminal 13 54 1.5E-5 T 23-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CDG60_11260 03c717dab90630a69d3d887b2569f028 288 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 25 185 2.2E-76 T 23-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CDG60_11260 03c717dab90630a69d3d887b2569f028 288 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 127 7.3E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_11260 03c717dab90630a69d3d887b2569f028 288 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 137 171 8.2E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_11260 03c717dab90630a69d3d887b2569f028 288 Gene3D G3DSA:2.160.10.10 86 208 1.6E-38 T 23-10-2018 CDG60_13420 708c0ed1587e686d5c720a92c3c6f67e 338 SUPERFAMILY SSF52540 9 192 4.73E-24 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_13420 708c0ed1587e686d5c720a92c3c6f67e 338 Gene3D G3DSA:3.40.50.300 7 203 1.5E-45 T 23-10-2018 CDG60_13420 708c0ed1587e686d5c720a92c3c6f67e 338 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 176 2.4E-41 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDG60_12355 91b1fb5eff12a8383f110e2f98b3d6ef 68 Gene3D G3DSA:1.10.260.40 1 68 3.4E-7 T 23-10-2018 CDG60_12355 91b1fb5eff12a8383f110e2f98b3d6ef 68 Pfam PF14549 DNA-binding transcriptional regulator Cro 14 46 1.3E-7 T 23-10-2018 CDG60_12355 91b1fb5eff12a8383f110e2f98b3d6ef 68 SUPERFAMILY SSF47413 2 48 3.82E-5 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_09500 426bb2d73cbc7b4d0d28cb64a8cc3c91 200 SUPERFAMILY SSF55469 3 199 1.44E-67 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_09500 426bb2d73cbc7b4d0d28cb64a8cc3c91 200 Pfam PF00881 Nitroreductase family 10 178 7.5E-14 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG60_09500 426bb2d73cbc7b4d0d28cb64a8cc3c91 200 Gene3D G3DSA:3.40.109.10 2 200 1.1E-82 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_09305 7e885f4773b4a7658ccca6375f28d2db 343 Gene3D G3DSA:1.10.10.60 237 341 1.2E-27 T 23-10-2018 CDG60_09305 7e885f4773b4a7658ccca6375f28d2db 343 Pfam PF12833 Helix-turn-helix domain 262 339 2.5E-21 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_09305 7e885f4773b4a7658ccca6375f28d2db 343 SMART SM00342 256 338 1.5E-26 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_09305 7e885f4773b4a7658ccca6375f28d2db 343 SUPERFAMILY SSF46689 291 340 2.87E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_09305 7e885f4773b4a7658ccca6375f28d2db 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 212 1.0E-19 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_09305 7e885f4773b4a7658ccca6375f28d2db 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 2.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_09305 7e885f4773b4a7658ccca6375f28d2db 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 2.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG60_01380 a9e3a17d999837a3b00b018317f6761b 103 Gene3D G3DSA:3.30.300.90 1 92 1.3E-25 T 23-10-2018 CDG60_01380 a9e3a17d999837a3b00b018317f6761b 103 SUPERFAMILY SSF82657 2 90 1.7E-27 T 23-10-2018 IPR036065 BolA-like superfamily CDG60_01380 a9e3a17d999837a3b00b018317f6761b 103 PIRSF PIRSF003113 1 99 4.5E-31 T 23-10-2018 IPR002634 BolA protein CDG60_01380 a9e3a17d999837a3b00b018317f6761b 103 Pfam PF01722 BolA-like protein 11 86 7.0E-24 T 23-10-2018 IPR002634 BolA protein CDG60_17295 bf22bf5f77cbc7c432021dd13e9f9ae7 257 Gene3D G3DSA:2.40.160.10 12 257 2.7E-5 T 23-10-2018 IPR023614 Porin domain superfamily CDG60_17295 bf22bf5f77cbc7c432021dd13e9f9ae7 257 SUPERFAMILY SSF56935 30 257 3.05E-8 T 23-10-2018 CDG60_17295 bf22bf5f77cbc7c432021dd13e9f9ae7 257 Pfam PF16956 Putative general bacterial porin 1 148 1.1E-14 T 23-10-2018 IPR031593 Putative general bacterial porin CDG60_03630 11789085614f633559e7e5b83ce723ac 484 SUPERFAMILY SSF52467 308 480 1.05E-73 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG60_03630 11789085614f633559e7e5b83ce723ac 484 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 477 2.2E-182 T 23-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CDG60_03630 11789085614f633559e7e5b83ce723ac 484 PIRSF PIRSF000204 3 481 1.3E-190 T 23-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CDG60_03630 11789085614f633559e7e5b83ce723ac 484 Gene3D G3DSA:3.40.50.1220 302 480 1.1E-81 T 23-10-2018 CDG60_09715 0ca2d734330e620902f6f072e4456227 206 Pfam PF14163 Super-infection exclusion protein B 20 163 1.7E-15 T 23-10-2018 IPR025982 Superinfection exclusion protein B CDG60_04010 4eb4aa3fede47949d6392ad6b1b47aef 291 Pfam PF10118 Predicted metal-dependent hydrolase 16 260 1.0E-71 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_04010 4eb4aa3fede47949d6392ad6b1b47aef 291 SUPERFAMILY SSF47240 6 203 2.52E-6 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_04010 4eb4aa3fede47949d6392ad6b1b47aef 291 PIRSF PIRSF007580 2 279 1.3E-62 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PIRSF PIRSF000126 2 278 1.4E-51 T 23-10-2018 CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 5.4E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 5.4E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.4E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 SUPERFAMILY SSF51735 12 233 1.33E-62 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.4E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.4E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.4E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.4E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.4E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 Pfam PF00106 short chain dehydrogenase 16 205 2.3E-54 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 Gene3D G3DSA:3.40.50.720 1 263 1.2E-64 T 23-10-2018 CDG60_16895 f83171abbbcff96df16bfd96f4136172 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 196 3.7E-4 T 23-10-2018 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 111 5.1E-8 T 23-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 Pfam PF13244 Domain of unknown function (DUF4040) 622 685 4.6E-18 T 23-10-2018 IPR025383 Domain of unknown function DUF4040 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 Pfam PF00361 Proton-conducting membrane transporter 130 417 4.8E-65 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 3.1E-35 T 23-10-2018 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 3.1E-35 T 23-10-2018 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 3.1E-35 T 23-10-2018 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 3.1E-35 T 23-10-2018 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 3.1E-35 T 23-10-2018 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 3.1E-35 T 23-10-2018 CDG60_02580 63c1164995aa44388054ecf1bc5d6d4a 946 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 798 924 2.8E-35 T 23-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CDG60_15490 2854ce4dfd47a311264d20b1cab8d5c2 657 Gene3D G3DSA:1.25.20.10 34 393 1.6E-55 T 23-10-2018 CDG60_15490 2854ce4dfd47a311264d20b1cab8d5c2 657 Gene3D G3DSA:1.10.530.10 485 648 2.8E-41 T 23-10-2018 CDG60_15490 2854ce4dfd47a311264d20b1cab8d5c2 657 SUPERFAMILY SSF48435 35 487 2.22E-85 T 23-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CDG60_15490 2854ce4dfd47a311264d20b1cab8d5c2 657 Pfam PF01464 Transglycosylase SLT domain 499 603 4.9E-21 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG60_15490 2854ce4dfd47a311264d20b1cab8d5c2 657 SUPERFAMILY SSF53955 490 648 3.19E-43 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_06815 0cbe4c9772bad4fd2aa7d4889ef1bd2a 236 Pfam PF13394 4Fe-4S single cluster domain 39 120 1.2E-11 T 23-10-2018 CDG60_06815 0cbe4c9772bad4fd2aa7d4889ef1bd2a 236 Pfam PF04055 Radical SAM superfamily 42 118 1.3E-12 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG60_06815 0cbe4c9772bad4fd2aa7d4889ef1bd2a 236 SUPERFAMILY SSF102114 41 119 2.49E-14 T 23-10-2018 CDG60_06815 0cbe4c9772bad4fd2aa7d4889ef1bd2a 236 Gene3D G3DSA:3.20.20.70 18 230 1.6E-36 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_06815 0cbe4c9772bad4fd2aa7d4889ef1bd2a 236 PIRSF PIRSF000370 16 236 7.2E-65 T 23-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CDG60_06815 0cbe4c9772bad4fd2aa7d4889ef1bd2a 236 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 233 36.846 T 23-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CDG60_06815 0cbe4c9772bad4fd2aa7d4889ef1bd2a 236 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 236 1.3E-100 T 23-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE CDG60_03170 b777b9856e859f458e4de8d9ec99eced 73 SUPERFAMILY SSF50249 4 71 4.0E-29 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_03170 b777b9856e859f458e4de8d9ec99eced 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 27.121 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDG60_03170 b777b9856e859f458e4de8d9ec99eced 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 1.4E-28 T 23-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CDG60_03170 b777b9856e859f458e4de8d9ec99eced 73 Gene3D G3DSA:2.40.50.140 2 71 2.0E-37 T 23-10-2018 CDG60_03170 b777b9856e859f458e4de8d9ec99eced 73 SMART SM00316 5 73 1.9E-7 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_03170 b777b9856e859f458e4de8d9ec99eced 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 71 2.3E-38 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDG60_01760 66e0a0d9f4f98e69c6adda54a2071b00 405 SUPERFAMILY SSF103473 15 396 6.02E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_01760 66e0a0d9f4f98e69c6adda54a2071b00 405 Gene3D G3DSA:1.20.1250.20 15 397 2.5E-45 T 23-10-2018 CDG60_01760 66e0a0d9f4f98e69c6adda54a2071b00 405 Pfam PF07690 Major Facilitator Superfamily 25 360 2.1E-33 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_01760 66e0a0d9f4f98e69c6adda54a2071b00 405 ProSitePatterns PS00216 Sugar transport proteins signature 1. 75 91 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_17875 36389c09545823164d5194111bee9301 237 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 7 237 3.4E-62 T 23-10-2018 IPR026387 Outer membrane protein CDG60_12265 30b3421125a952133c87a886671fabfc 175 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 9 162 1.8E-16 T 23-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CDG60_12265 30b3421125a952133c87a886671fabfc 175 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 12 134 7.3E-8 T 23-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CDG60_05975 99ecae115ab848653461f7ab59128d94 440 SMART SM01011 4 141 8.0E-55 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CDG60_05975 99ecae115ab848653461f7ab59128d94 440 Pfam PF00557 Metallopeptidase family M24 185 417 1.1E-59 T 23-10-2018 IPR000994 Peptidase M24 CDG60_05975 99ecae115ab848653461f7ab59128d94 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 352 364 - T 23-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CDG60_05975 99ecae115ab848653461f7ab59128d94 440 Gene3D G3DSA:3.40.350.10 4 176 4.9E-52 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDG60_05975 99ecae115ab848653461f7ab59128d94 440 SUPERFAMILY SSF53092 4 179 3.14E-44 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDG60_05975 99ecae115ab848653461f7ab59128d94 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 129 7.6E-36 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CDG60_05975 99ecae115ab848653461f7ab59128d94 440 SUPERFAMILY SSF55920 180 438 2.22E-83 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like CDG60_05975 99ecae115ab848653461f7ab59128d94 440 Gene3D G3DSA:3.90.230.10 177 440 2.1E-96 T 23-10-2018 CDG60_13780 b7e495fc9fee5979d7b5792734aa4451 294 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 283 2.9E-17 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG60_13780 b7e495fc9fee5979d7b5792734aa4451 294 Gene3D G3DSA:3.40.50.1100 39 138 4.0E-24 T 23-10-2018 CDG60_13780 b7e495fc9fee5979d7b5792734aa4451 294 SUPERFAMILY SSF53686 21 289 9.33E-52 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG60_13780 b7e495fc9fee5979d7b5792734aa4451 294 Gene3D G3DSA:3.40.50.1100 139 290 6.7E-34 T 23-10-2018 CDG60_13780 b7e495fc9fee5979d7b5792734aa4451 294 PIRSF PIRSF006278 4 293 1.5E-69 T 23-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CDG60_13010 9baa82aee0656e6fe7e40c8165cc0eac 123 Gene3D G3DSA:2.60.120.10 7 117 1.4E-19 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_13010 9baa82aee0656e6fe7e40c8165cc0eac 123 Pfam PF05899 Protein of unknown function (DUF861) 44 113 1.5E-11 T 23-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 CDG60_13010 9baa82aee0656e6fe7e40c8165cc0eac 123 SUPERFAMILY SSF51182 33 117 3.49E-11 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_04380 470d9822e2f988eef60ddb4f440f7a5e 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 4.1E-10 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_04380 470d9822e2f988eef60ddb4f440f7a5e 176 Gene3D G3DSA:2.160.10.10 1 174 1.3E-61 T 23-10-2018 CDG60_04380 470d9822e2f988eef60ddb4f440f7a5e 176 SUPERFAMILY SSF51161 20 170 1.8E-45 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 265 281 3.4E-39 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 307 318 3.4E-39 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.4E-39 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 3.4E-39 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 299 3.4E-39 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 SMART SM01097 3 136 2.0E-90 T 23-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 Gene3D G3DSA:3.40.50.880 155 379 5.2E-71 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 135 2.6E-51 T 23-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 SUPERFAMILY SSF52317 157 377 1.68E-60 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 SUPERFAMILY SSF52021 4 143 1.7E-55 T 23-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 379 46.882 T 23-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 7.5E-144 T 23-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 Pfam PF00117 Glutamine amidotransferase class-I 196 373 3.7E-46 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 350 363 4.8E-11 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 4.8E-11 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 265 276 4.8E-11 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 Gene3D G3DSA:3.50.30.20 3 154 6.3E-59 T 23-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.5E-5 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00097 Anthranilate synthase component II signature 265 276 1.5E-5 T 23-10-2018 CDG60_05745 c66d08b6833362f17315bf40f5156b3f 380 PRINTS PR00097 Anthranilate synthase component II signature 350 363 1.5E-5 T 23-10-2018 CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 1311 1385 2.3E-12 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF12245 Bacterial Ig-like domain (group 3) 328 354 1.8 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF12245 Bacterial Ig-like domain (group 3) 704 730 0.0027 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF12245 Bacterial Ig-like domain (group 3) 1367 1381 0.35 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF12245 Bacterial Ig-like domain (group 3) 517 546 0.0016 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF12245 Bacterial Ig-like domain (group 3) 1182 1206 1.3 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF12245 Bacterial Ig-like domain (group 3) 422 447 0.15 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF12245 Bacterial Ig-like domain (group 3) 610 641 0.016 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 653 745 1.7E-19 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 1128 1224 1.1E-13 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 753 839 8.4E-14 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 935 1025 5.4E-12 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 557 650 3.0E-19 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 1026 1125 1.7E-11 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 174 272 3.0E-10 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 465 556 1.1E-20 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 843 934 1.6E-17 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 1225 1310 3.6E-6 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 273 368 3.4E-19 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Gene3D G3DSA:2.60.40.10 369 462 4.1E-20 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1836 1914 0.0021 T 23-10-2018 IPR010221 VCBS repeat CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF13750 Bacterial Ig-like domain (group 3) 899 962 0.0068 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_05010 8e451c1fc377960fbe93af070ef14161 1983 Pfam PF13750 Bacterial Ig-like domain (group 3) 799 882 0.0019 T 23-10-2018 IPR022038 Bacterial Ig-like domain CDG60_13545 c608fdffd8cb2bb16f25520742175275 153 Pfam PF11042 Protein of unknown function (DUF2750) 24 123 2.5E-17 T 23-10-2018 IPR021284 Protein of unknown function DUF2750 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.7E-19 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.7E-19 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.7E-19 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 SUPERFAMILY SSF47729 1 89 2.94E-33 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 8.4E-35 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 Gene3D G3DSA:4.10.520.10 1 90 4.9E-38 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG60_10050 61803d44027a1e8595ae6c1ce4da1a30 90 SMART SM00411 1 90 4.6E-47 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG60_03145 272aefc338ebb439b121e218072edd55 482 ProSitePatterns PS01244 Aconitase family signature 2. 416 429 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 Gene3D G3DSA:3.30.499.20 15 302 9.3E-95 T 23-10-2018 CDG60_03145 272aefc338ebb439b121e218072edd55 482 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 13 482 3.9E-234 T 23-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 SUPERFAMILY SSF53732 13 481 7.72E-163 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 Pfam PF00330 Aconitase family (aconitate hydratase) 18 474 9.5E-159 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 ProSitePatterns PS00450 Aconitase family signature 1. 355 371 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 135 148 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 416 429 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 149 164 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 225 238 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 98 111 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 124 132 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 211 224 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 302 316 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 PRINTS PR00415 Aconitase family signature 359 370 2.7E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 Gene3D G3DSA:3.30.499.10 344 482 7.1E-49 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG60_03145 272aefc338ebb439b121e218072edd55 482 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 12 482 58.889 T 23-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 PIRSF PIRSF000485 1 483 3.3E-165 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 Gene3D G3DSA:3.40.50.2020 275 445 7.0E-149 T 23-10-2018 CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.672 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 SUPERFAMILY SSF56235 2 257 9.44E-70 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 Pfam PF13522 Glutamine amidotransferase domain 65 206 4.8E-16 T 23-10-2018 CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 Gene3D G3DSA:3.60.20.10 2 468 7.0E-149 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.2E-157 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 Pfam PF00156 Phosphoribosyl transferase domain 277 394 1.2E-9 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG60_07795 a1b903b08a9e9001070da764593f1c11 512 SUPERFAMILY SSF53271 250 484 6.42E-71 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_09330 9a931e2e8fb34b3ea118e280becdde05 351 PIRSF PIRSF001361 3 348 2.1E-133 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG60_09330 9a931e2e8fb34b3ea118e280becdde05 351 Pfam PF00793 DAHP synthetase I family 42 334 8.7E-77 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG60_09330 9a931e2e8fb34b3ea118e280becdde05 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 18 343 1.0E-122 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG60_09330 9a931e2e8fb34b3ea118e280becdde05 351 SUPERFAMILY SSF51569 18 343 6.7E-107 T 23-10-2018 CDG60_09330 9a931e2e8fb34b3ea118e280becdde05 351 Gene3D G3DSA:3.20.20.70 8 345 1.8E-131 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_12440 df0dbf01b35af6e047ef0f6d2f75b5ef 203 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 4 198 24.517 T 23-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CDG60_12440 df0dbf01b35af6e047ef0f6d2f75b5ef 203 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 108 199 9.0E-43 T 23-10-2018 IPR012997 Rare lipoprotein A CDG60_12440 df0dbf01b35af6e047ef0f6d2f75b5ef 203 Pfam PF03330 Lytic transglycolase 106 194 3.0E-27 T 23-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CDG60_12440 df0dbf01b35af6e047ef0f6d2f75b5ef 203 Gene3D G3DSA:2.40.40.10 105 199 5.1E-40 T 23-10-2018 IPR036908 RlpA-like domain superfamily CDG60_12440 df0dbf01b35af6e047ef0f6d2f75b5ef 203 SUPERFAMILY SSF50685 106 199 4.19E-15 T 23-10-2018 IPR036908 RlpA-like domain superfamily CDG60_05635 51accdeab7bf13fa825a123439218482 337 Pfam PF00579 tRNA synthetases class I (W and Y) 6 288 1.3E-54 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_05635 51accdeab7bf13fa825a123439218482 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 3.3E-21 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG60_05635 51accdeab7bf13fa825a123439218482 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 20 36 3.3E-21 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG60_05635 51accdeab7bf13fa825a123439218482 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 3.3E-21 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG60_05635 51accdeab7bf13fa825a123439218482 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 3.3E-21 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG60_05635 51accdeab7bf13fa825a123439218482 337 Gene3D G3DSA:3.40.50.620 10 329 7.1E-102 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_05635 51accdeab7bf13fa825a123439218482 337 Gene3D G3DSA:1.10.240.10 188 302 7.1E-102 T 23-10-2018 CDG60_05635 51accdeab7bf13fa825a123439218482 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 333 8.3E-70 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG60_05635 51accdeab7bf13fa825a123439218482 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_05635 51accdeab7bf13fa825a123439218482 337 SUPERFAMILY SSF52374 9 333 1.39E-77 T 23-10-2018 CDG60_11875 aec2c21b13fd9097344c2ddc819e1e57 419 Gene3D G3DSA:3.90.1860.10 5 419 1.1E-117 T 23-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CDG60_11875 aec2c21b13fd9097344c2ddc819e1e57 419 SUPERFAMILY SSF103365 20 419 3.66E-139 T 23-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CDG60_11875 aec2c21b13fd9097344c2ddc819e1e57 419 Pfam PF01139 tRNA-splicing ligase RtcB 44 419 1.2E-135 T 23-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CDG60_10845 fc4da24d8a33da9bb28004cfca50db8f 284 Pfam PF01575 MaoC like domain 178 226 3.3E-10 T 23-10-2018 IPR002539 MaoC-like dehydratase domain CDG60_10845 fc4da24d8a33da9bb28004cfca50db8f 284 SUPERFAMILY SSF54637 178 281 7.46E-16 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_10845 fc4da24d8a33da9bb28004cfca50db8f 284 Gene3D G3DSA:3.10.129.10 33 284 2.0E-65 T 23-10-2018 CDG60_10845 fc4da24d8a33da9bb28004cfca50db8f 284 SUPERFAMILY SSF54637 34 155 4.99E-6 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_05180 2f56819e26afaafaff3852cae357650f 347 Gene3D G3DSA:1.10.287.110 183 236 1.3E-6 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_05180 2f56819e26afaafaff3852cae357650f 347 SUPERFAMILY SSF46565 189 229 1.7E-6 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG60_10160 929b16b03f74754b651c576569db2108 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 186 6.1E-21 T 23-10-2018 CDG60_10160 929b16b03f74754b651c576569db2108 228 Gene3D G3DSA:3.40.50.1000 8 195 7.1E-29 T 23-10-2018 IPR023214 HAD superfamily CDG60_10160 929b16b03f74754b651c576569db2108 228 SUPERFAMILY SSF56784 2 214 1.13E-35 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_10160 929b16b03f74754b651c576569db2108 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 185 2.3E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_14450 b88235e9d36270e196d1c360c404889d 133 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 127 3.8E-59 T 23-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 CDG60_14450 b88235e9d36270e196d1c360c404889d 133 Pfam PF03817 Malonate transporter MadL subunit 1 115 3.5E-41 T 23-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 CDG60_07655 0a0a0712a7f74a6b9601b7d715280a47 114 SUPERFAMILY SSF103481 11 110 3.27E-20 T 23-10-2018 CDG60_07655 0a0a0712a7f74a6b9601b7d715280a47 114 Gene3D G3DSA:1.10.3730.20 5 114 7.6E-36 T 23-10-2018 CDG60_07655 0a0a0712a7f74a6b9601b7d715280a47 114 Pfam PF00893 Small Multidrug Resistance protein 8 98 1.3E-27 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG60_17725 093743bc4d8ed54f81faa38ad9ea3db3 138 Pfam PF01551 Peptidase family M23 32 126 6.5E-24 T 23-10-2018 IPR016047 Peptidase M23 CDG60_17725 093743bc4d8ed54f81faa38ad9ea3db3 138 Gene3D G3DSA:2.70.70.10 5 138 3.4E-46 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG60_17725 093743bc4d8ed54f81faa38ad9ea3db3 138 SUPERFAMILY SSF51261 19 137 4.55E-32 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG60_07200 48cc47b4f4f42826eda3dbc19cba9722 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 35.269 T 23-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG60_07200 48cc47b4f4f42826eda3dbc19cba9722 256 Pfam PF01975 Survival protein SurE 3 185 1.0E-55 T 23-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG60_07200 48cc47b4f4f42826eda3dbc19cba9722 256 SUPERFAMILY SSF64167 2 254 8.5E-74 T 23-10-2018 CDG60_07200 48cc47b4f4f42826eda3dbc19cba9722 256 Gene3D G3DSA:3.40.1210.10 1 256 1.6E-81 T 23-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG60_07200 48cc47b4f4f42826eda3dbc19cba9722 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 242 3.9E-64 T 23-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG60_04020 25ef0c58520bdf1b51a713d839a6ff4c 344 Gene3D G3DSA:1.10.10.60 235 343 1.5E-19 T 23-10-2018 CDG60_04020 25ef0c58520bdf1b51a713d839a6ff4c 344 SMART SM00342 257 338 8.3E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_04020 25ef0c58520bdf1b51a713d839a6ff4c 344 SUPERFAMILY SSF46689 294 342 9.41E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_04020 25ef0c58520bdf1b51a713d839a6ff4c 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 52 209 2.2E-25 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG60_04020 25ef0c58520bdf1b51a713d839a6ff4c 344 Pfam PF12833 Helix-turn-helix domain 263 333 2.7E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 PRINTS PR00175 Sodium/alanine symporter signature 303 321 2.2E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.2E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.2E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 PRINTS PR00175 Sodium/alanine symporter signature 93 115 2.2E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 PRINTS PR00175 Sodium/alanine symporter signature 410 430 2.2E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 PRINTS PR00175 Sodium/alanine symporter signature 351 373 2.2E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 Pfam PF01235 Sodium:alanine symporter family 55 449 3.8E-154 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_06445 c01e27e101a8c7e1b647be9486c28022 451 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 7.8E-158 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG60_04905 88a956ced06b1df515538bd6f9864abe 189 SUPERFAMILY SSF52833 40 186 1.49E-48 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_04905 88a956ced06b1df515538bd6f9864abe 189 Pfam PF00578 AhpC/TSA family 41 165 9.4E-41 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_04905 88a956ced06b1df515538bd6f9864abe 189 PIRSF PIRSF000239 34 184 8.2E-32 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG60_04905 88a956ced06b1df515538bd6f9864abe 189 Gene3D G3DSA:3.40.30.10 38 188 1.2E-48 T 23-10-2018 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 SUPERFAMILY SSF51971 335 519 5.41E-40 T 23-10-2018 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 Gene3D G3DSA:3.20.20.70 4 371 7.6E-121 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 639 1.2E-22 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 Gene3D G3DSA:3.40.50.720 377 670 4.2E-106 T 23-10-2018 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 2.1E-11 T 23-10-2018 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 2.1E-11 T 23-10-2018 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 398 2.1E-11 T 23-10-2018 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 332 1.4E-74 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 Gene3D G3DSA:3.50.50.60 473 629 4.2E-106 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 SUPERFAMILY SSF51395 2 364 2.49E-107 T 23-10-2018 CDG60_06300 4fde2538ff2acd32b1b5c8b7ec7be0b1 677 SUPERFAMILY SSF51905 471 631 1.9E-13 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 Gene3D G3DSA:1.10.3860.10 1 412 1.7E-125 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 Pfam PF00375 Sodium:dicarboxylate symporter family 3 403 1.6E-119 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.6E-55 T 23-10-2018 CDG60_16060 ab1866b391c62d1cfdeeb01c17ca2af8 412 SUPERFAMILY SSF118215 3 403 1.01E-107 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_08665 b2a631dd7b44e6ccb2d0acd228d4b2ff 408 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 46 384 9.5E-78 T 23-10-2018 IPR006427 Phage portal protein, HK97 CDG60_08665 b2a631dd7b44e6ccb2d0acd228d4b2ff 408 Pfam PF04860 Phage portal protein 52 378 1.4E-95 T 23-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CDG60_06760 e8c6e337536766fc8c68a282ae5a06dd 105 SUPERFAMILY SSF102705 2 100 7.85E-24 T 23-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDG60_06760 e8c6e337536766fc8c68a282ae5a06dd 105 Gene3D G3DSA:3.30.70.120 1 103 6.1E-40 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG60_02100 a7c204d275ba76a9056409b1cc20d946 631 Pfam PF13667 ThiC-associated domain 27 103 8.7E-34 T 23-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG60_02100 a7c204d275ba76a9056409b1cc20d946 631 Gene3D G3DSA:3.20.20.540 211 523 5.8E-157 T 23-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG60_02100 a7c204d275ba76a9056409b1cc20d946 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 142 592 100.844 T 23-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG60_02100 a7c204d275ba76a9056409b1cc20d946 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 142 590 5.0E-220 T 23-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG60_02100 a7c204d275ba76a9056409b1cc20d946 631 Pfam PF01964 Radical SAM ThiC family 144 587 8.2E-206 T 23-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG60_07505 9a82e2e91bebceda0122cbf732a8c590 348 SUPERFAMILY SSF56235 24 324 4.09E-99 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG60_07505 9a82e2e91bebceda0122cbf732a8c590 348 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 24 312 2.1E-49 T 23-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CDG60_07505 9a82e2e91bebceda0122cbf732a8c590 348 Gene3D G3DSA:3.60.60.10 24 348 4.0E-129 T 23-10-2018 CDG60_16205 1f035d3436bf6e6de15f44f27482df96 416 SUPERFAMILY SSF53448 41 297 5.91E-57 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_16205 1f035d3436bf6e6de15f44f27482df96 416 Pfam PF13641 Glycosyltransferase like family 2 51 278 5.1E-36 T 23-10-2018 CDG60_16205 1f035d3436bf6e6de15f44f27482df96 416 Gene3D G3DSA:3.90.550.10 28 269 2.6E-45 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_16540 43d0d3abd5e9afccbfff340f303e3a15 317 Gene3D G3DSA:3.40.1010.20 97 197 5.0E-113 T 23-10-2018 CDG60_16540 43d0d3abd5e9afccbfff340f303e3a15 317 Pfam PF02401 LytB protein 3 283 4.8E-96 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDG60_16540 43d0d3abd5e9afccbfff340f303e3a15 317 Gene3D G3DSA:3.40.50.11270 12 96 5.0E-113 T 23-10-2018 CDG60_16540 43d0d3abd5e9afccbfff340f303e3a15 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 4.5E-102 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDG60_16540 43d0d3abd5e9afccbfff340f303e3a15 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.821 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDG60_16540 43d0d3abd5e9afccbfff340f303e3a15 317 Gene3D G3DSA:3.40.1010.20 6 283 5.0E-113 T 23-10-2018 CDG60_12940 1f82771563be3ea6602d945599e131c7 309 Gene3D G3DSA:3.40.50.1820 11 309 2.7E-36 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_12940 1f82771563be3ea6602d945599e131c7 309 Pfam PF07859 alpha/beta hydrolase fold 85 277 2.3E-24 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG60_12940 1f82771563be3ea6602d945599e131c7 309 SUPERFAMILY SSF53474 40 307 5.17E-27 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04770 5dadec019c1bfb5aa41750fad743416d 119 Pfam PF04343 Protein of unknown function, DUF488 6 113 4.6E-31 T 23-10-2018 IPR007438 Protein of unknown function DUF488 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 267 5.5E-98 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 4.9E-42 T 23-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 127 2.7E-40 T 23-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 PIRSF PIRSF000161 3 270 4.2E-86 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 SUPERFAMILY SSF55347 129 238 6.98E-38 T 23-10-2018 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 23-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 Gene3D G3DSA:3.40.50.720 7 266 1.5E-101 T 23-10-2018 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 SUPERFAMILY SSF51735 5 270 4.79E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 267 35.252 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG60_01045 d92fabde84ba8ecf648cd41311a70b55 271 Gene3D G3DSA:3.30.360.10 129 236 1.5E-101 T 23-10-2018 CDG60_04045 5ed7cf3ea3c6676f773bd9e7e3aa9836 191 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 125 135 - T 23-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CDG60_04045 5ed7cf3ea3c6676f773bd9e7e3aa9836 191 SUPERFAMILY SSF52799 38 162 2.23E-26 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG60_04045 5ed7cf3ea3c6676f773bd9e7e3aa9836 191 Gene3D G3DSA:3.90.190.10 27 190 2.8E-37 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG60_04045 5ed7cf3ea3c6676f773bd9e7e3aa9836 191 Pfam PF00782 Dual specificity phosphatase, catalytic domain 50 160 1.4E-11 T 23-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 PRINTS PR00050 Cold shock protein signature 44 62 3.4E-17 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 PRINTS PR00050 Cold shock protein signature 29 38 3.4E-17 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 PRINTS PR00050 Cold shock protein signature 9 24 3.4E-17 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 SMART SM00357 8 71 2.9E-29 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 20 38 - T 23-10-2018 IPR019844 Cold-shock conserved site CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 SUPERFAMILY SSF50249 5 70 3.77E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 Gene3D G3DSA:2.40.50.140 6 69 3.9E-28 T 23-10-2018 CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 Pfam PF00313 'Cold-shock' DNA-binding domain 8 70 1.1E-28 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG60_10700 5d0b4a87e3ff0c002c713d9412b42912 71 PIRSF PIRSF002599 2 71 8.8E-24 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 CDG60_12180 a62abb8b147e5de97f194982d563e371 183 Gene3D G3DSA:1.10.530.40 9 182 1.6E-25 T 23-10-2018 CDG60_12180 a62abb8b147e5de97f194982d563e371 183 Pfam PF00959 Phage lysozyme 53 158 4.8E-6 T 23-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CDG60_12180 a62abb8b147e5de97f194982d563e371 183 SUPERFAMILY SSF53955 34 181 5.12E-20 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG60_15360 3253be55a5025477d49dd926a63a0af7 162 Gene3D G3DSA:3.30.70.860 96 162 1.2E-29 T 23-10-2018 IPR035571 UPF0234-like, C-terminal CDG60_15360 3253be55a5025477d49dd926a63a0af7 162 SUPERFAMILY SSF89963 90 162 1.31E-27 T 23-10-2018 IPR036183 YajQ-like superfamily CDG60_15360 3253be55a5025477d49dd926a63a0af7 162 Pfam PF04461 Protein of unknown function (DUF520) 2 161 8.9E-62 T 23-10-2018 IPR007551 Protein of unknown function DUF520 CDG60_15360 3253be55a5025477d49dd926a63a0af7 162 Gene3D G3DSA:3.30.70.990 9 95 4.9E-28 T 23-10-2018 IPR035570 UPF0234, N-terminal CDG60_15360 3253be55a5025477d49dd926a63a0af7 162 SUPERFAMILY SSF89963 2 88 6.54E-28 T 23-10-2018 IPR036183 YajQ-like superfamily CDG60_15360 3253be55a5025477d49dd926a63a0af7 162 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 162 25.669 T 23-10-2018 IPR007551 Protein of unknown function DUF520 CDG60_03205 8479a5f0adbe00649ffc820ace7970b5 373 SUPERFAMILY SSF56219 101 319 7.07E-32 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG60_03205 8479a5f0adbe00649ffc820ace7970b5 373 Gene3D G3DSA:3.60.10.10 101 322 5.1E-22 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG60_03205 8479a5f0adbe00649ffc820ace7970b5 373 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 114 312 2.8E-14 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDG60_02485 70159d8f61f93fc1c73f54fcf5ae70a0 199 SUPERFAMILY SSF52540 1 194 3.39E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02485 70159d8f61f93fc1c73f54fcf5ae70a0 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.4E-54 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDG60_02485 70159d8f61f93fc1c73f54fcf5ae70a0 199 Gene3D G3DSA:3.40.50.300 1 198 2.3E-65 T 23-10-2018 CDG60_02485 70159d8f61f93fc1c73f54fcf5ae70a0 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 26.463 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDG60_02485 70159d8f61f93fc1c73f54fcf5ae70a0 199 Pfam PF01121 Dephospho-CoA kinase 4 179 1.1E-62 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 Gene3D G3DSA:1.10.8.60 701 783 1.1E-10 T 23-10-2018 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 Gene3D G3DSA:3.40.50.300 520 700 3.6E-51 T 23-10-2018 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 ProSitePatterns PS00674 AAA-protein family signature. 671 690 - T 23-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 ProSitePatterns PS00674 AAA-protein family signature. 425 444 - T 23-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 Gene3D G3DSA:3.40.50.300 271 473 7.5E-50 T 23-10-2018 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 SUPERFAMILY SSF52540 282 506 1.59E-41 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 570 698 1.6E-37 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 323 452 9.1E-32 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 SMART SM00382 566 701 1.4E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 SMART SM00382 319 455 4.7E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_07595 5d3cb1b75857afceb2314c308788f9dd 784 SUPERFAMILY SSF52540 528 774 1.17E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15455 2f3da26656efafc318f2ac306fefa14d 285 Gene3D G3DSA:3.40.50.150 1 285 7.3E-97 T 23-10-2018 CDG60_15455 2f3da26656efafc318f2ac306fefa14d 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 283 6.9E-69 T 23-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CDG60_15455 2f3da26656efafc318f2ac306fefa14d 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 270 39.005 T 23-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CDG60_15455 2f3da26656efafc318f2ac306fefa14d 285 SUPERFAMILY SSF53335 8 276 4.23E-82 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_15980 00fcf9995db235f185c3419f3b151d1a 106 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 20.74 T 23-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CDG60_15980 00fcf9995db235f185c3419f3b151d1a 106 SUPERFAMILY SSF54189 2 91 1.8E-30 T 23-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_15980 00fcf9995db235f185c3419f3b151d1a 106 Gene3D G3DSA:3.30.70.330 1 97 1.7E-32 T 23-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDG60_15980 00fcf9995db235f185c3419f3b151d1a 106 Pfam PF00276 Ribosomal protein L23 9 93 2.1E-29 T 23-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CDG60_02900 a525f4c51d427202403752f50b8e9011 89 Pfam PF04024 PspC domain 6 62 1.0E-19 T 23-10-2018 IPR007168 Phage shock protein, PspC, N-terminal CDG60_04100 5861649b7da10d413179acc21d69359d 159 Gene3D G3DSA:3.30.1330.60 23 158 1.2E-34 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_04100 5861649b7da10d413179acc21d69359d 159 PRINTS PR01021 OMPA domain signature 57 79 4.9E-12 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04100 5861649b7da10d413179acc21d69359d 159 PRINTS PR01021 OMPA domain signature 102 118 4.9E-12 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04100 5861649b7da10d413179acc21d69359d 159 PRINTS PR01021 OMPA domain signature 87 102 4.9E-12 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_04100 5861649b7da10d413179acc21d69359d 159 SUPERFAMILY SSF103088 45 159 1.44E-30 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_04100 5861649b7da10d413179acc21d69359d 159 Pfam PF00691 OmpA family 56 151 2.0E-20 T 23-10-2018 IPR006665 OmpA-like domain CDG60_07310 dfc64f8a1389a7ea9668f2f12af29fc8 108 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 91 5.1E-16 T 23-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CDG60_07310 dfc64f8a1389a7ea9668f2f12af29fc8 108 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 5.9E-37 T 23-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 CDG60_00365 bc8f5cf40821d2128c4a4b679101610a 341 Gene3D G3DSA:3.30.420.10 172 333 1.8E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_00365 bc8f5cf40821d2128c4a4b679101610a 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG60_00365 bc8f5cf40821d2128c4a4b679101610a 341 SUPERFAMILY SSF53098 180 326 8.6E-28 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_00365 bc8f5cf40821d2128c4a4b679101610a 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG60_02805 77c3bf2a727bd362936daddc0e99781a 214 Pfam PF02390 Putative methyltransferase 23 155 7.0E-20 T 23-10-2018 CDG60_02805 77c3bf2a727bd362936daddc0e99781a 214 Gene3D G3DSA:3.40.50.150 3 195 8.2E-26 T 23-10-2018 CDG60_02805 77c3bf2a727bd362936daddc0e99781a 214 SUPERFAMILY SSF53335 21 156 1.57E-9 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_04215 c76666de9fcc933519c43aabff790af7 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 145 8.1E-25 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_04215 c76666de9fcc933519c43aabff790af7 148 Gene3D G3DSA:2.40.128.520 21 148 2.9E-18 T 23-10-2018 CDG60_12500 9efb2bb422a1d408ef2bf1ddbb97bba1 378 Pfam PF03922 OmpW family 223 378 1.9E-12 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG60_12500 9efb2bb422a1d408ef2bf1ddbb97bba1 378 SUPERFAMILY SSF56925 137 378 1.57E-17 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_12875 220a9cf27abc253f8f87c70532592e0c 364 PRINTS PR01021 OMPA domain signature 288 304 6.4E-14 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_12875 220a9cf27abc253f8f87c70532592e0c 364 PRINTS PR01021 OMPA domain signature 273 288 6.4E-14 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_12875 220a9cf27abc253f8f87c70532592e0c 364 PRINTS PR01021 OMPA domain signature 243 265 6.4E-14 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_12875 220a9cf27abc253f8f87c70532592e0c 364 Gene3D G3DSA:3.30.1330.60 218 351 5.3E-32 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_12875 220a9cf27abc253f8f87c70532592e0c 364 Pfam PF00691 OmpA family 243 332 1.1E-18 T 23-10-2018 IPR006665 OmpA-like domain CDG60_12875 220a9cf27abc253f8f87c70532592e0c 364 SUPERFAMILY SSF103088 231 342 1.57E-29 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_00530 69b15640c6832ffe6333babc3277c259 104 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 40 96 7.4E-19 T 23-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system CDG60_06210 3a469efc0bbf8bafd89d91f5f527b35f 472 ProSitePatterns PS00218 Amino acid permeases signature. 52 83 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG60_06210 3a469efc0bbf8bafd89d91f5f527b35f 472 Pfam PF00324 Amino acid permease 27 444 1.9E-115 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_06210 3a469efc0bbf8bafd89d91f5f527b35f 472 PIRSF PIRSF006060 2 472 1.6E-76 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_06210 3a469efc0bbf8bafd89d91f5f527b35f 472 Gene3D G3DSA:1.20.1740.10 19 472 1.4E-65 T 23-10-2018 CDG60_05825 85550eff89581ac609b461f57358a3ab 222 SUPERFAMILY SSF53335 62 211 7.21E-22 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_05825 85550eff89581ac609b461f57358a3ab 222 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 87 155 4.4E-15 T 23-10-2018 CDG60_05825 85550eff89581ac609b461f57358a3ab 222 Gene3D G3DSA:3.40.50.150 51 212 2.0E-21 T 23-10-2018 CDG60_00395 7abf9ba7392815238ce7523d78c72aef 213 SUPERFAMILY SSF101082 28 196 2.88E-28 T 23-10-2018 CDG60_00395 7abf9ba7392815238ce7523d78c72aef 213 Pfam PF07996 Type IV secretion system proteins 28 196 1.1E-24 T 23-10-2018 IPR014158 Type IV secretion system, VirB5 CDG60_00395 7abf9ba7392815238ce7523d78c72aef 213 Gene3D G3DSA:1.20.58.430 23 199 4.4E-27 T 23-10-2018 IPR023220 Type IV secretion system, VirB5-domain CDG60_14340 20f0a43438ef04acdee90e6e426e414e 521 Pfam PF01926 50S ribosome-binding GTPase 100 226 3.7E-9 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_14340 20f0a43438ef04acdee90e6e426e414e 521 Gene3D G3DSA:3.40.50.300 61 287 5.2E-21 T 23-10-2018 CDG60_14340 20f0a43438ef04acdee90e6e426e414e 521 SUPERFAMILY SSF52540 88 261 1.17E-18 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07645 a44e92b0d4006d1b667494fd7e8ebcb5 147 Pfam PF00582 Universal stress protein family 3 146 1.1E-34 T 23-10-2018 IPR006016 UspA CDG60_07645 a44e92b0d4006d1b667494fd7e8ebcb5 147 SUPERFAMILY SSF52402 1 146 5.09E-39 T 23-10-2018 CDG60_07645 a44e92b0d4006d1b667494fd7e8ebcb5 147 Gene3D G3DSA:3.40.50.620 1 146 1.5E-39 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_07645 a44e92b0d4006d1b667494fd7e8ebcb5 147 PRINTS PR01438 Universal stress protein signature 124 146 1.1E-20 T 23-10-2018 IPR006015 Universal stress protein A CDG60_07645 a44e92b0d4006d1b667494fd7e8ebcb5 147 PRINTS PR01438 Universal stress protein signature 3 21 1.1E-20 T 23-10-2018 IPR006015 Universal stress protein A CDG60_07645 a44e92b0d4006d1b667494fd7e8ebcb5 147 PRINTS PR01438 Universal stress protein signature 106 118 1.1E-20 T 23-10-2018 IPR006015 Universal stress protein A CDG60_07645 a44e92b0d4006d1b667494fd7e8ebcb5 147 PIRSF PIRSF006276 1 147 1.8E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG60_15320 8d6ee58f62d02fa16ec02bc80f369429 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 224 4.1E-60 T 23-10-2018 IPR001405 Uncharacterised protein family UPF0758 CDG60_15320 8d6ee58f62d02fa16ec02bc80f369429 230 Gene3D G3DSA:1.10.150.20 46 89 2.3E-6 T 23-10-2018 CDG60_15320 8d6ee58f62d02fa16ec02bc80f369429 230 Pfam PF04002 RadC-like JAB domain 107 224 7.4E-34 T 23-10-2018 IPR025657 RadC-like JAB domain CDG60_15320 8d6ee58f62d02fa16ec02bc80f369429 230 SUPERFAMILY SSF47781 17 93 1.33E-11 T 23-10-2018 IPR010994 RuvA domain 2-like CDG60_15320 8d6ee58f62d02fa16ec02bc80f369429 230 Gene3D G3DSA:3.40.140.10 102 227 1.9E-34 T 23-10-2018 CDG60_17145 6298ce9cedc0ae6e544dfaee961f44cc 113 Pfam PF06942 GlpM protein 6 111 3.7E-45 T 23-10-2018 IPR009707 Membrane protein GlpM/YdgC CDG60_17145 6298ce9cedc0ae6e544dfaee961f44cc 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 108 1.0E-29 T 23-10-2018 IPR009707 Membrane protein GlpM/YdgC CDG60_14645 fd7f04ec0bd58eceae36873fd3c8cdf6 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 132 10.019 T 23-10-2018 IPR022907 VapC family GO:0004540 CDG60_14645 fd7f04ec0bd58eceae36873fd3c8cdf6 139 SUPERFAMILY SSF88723 1 135 9.25E-36 T 23-10-2018 IPR029060 PIN-like domain superfamily CDG60_14645 fd7f04ec0bd58eceae36873fd3c8cdf6 139 Pfam PF01850 PIN domain 5 127 2.3E-15 T 23-10-2018 IPR002716 PIN domain CDG60_14645 fd7f04ec0bd58eceae36873fd3c8cdf6 139 Gene3D G3DSA:3.40.50.1010 2 135 2.8E-39 T 23-10-2018 CDG60_16715 dd3e52c9211f082484df0452c505688a 296 Pfam PF10118 Predicted metal-dependent hydrolase 23 265 4.9E-72 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_16715 dd3e52c9211f082484df0452c505688a 296 PIRSF PIRSF007580 6 283 1.7E-65 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_17415 25d1a10d137b0433a24fe96417ba9b52 272 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 14 270 2.4E-67 T 23-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CDG60_17415 25d1a10d137b0433a24fe96417ba9b52 272 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 14 268 3.7E-64 T 23-10-2018 CDG60_17415 25d1a10d137b0433a24fe96417ba9b52 272 SUPERFAMILY SSF56219 14 271 1.44E-70 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG60_17415 25d1a10d137b0433a24fe96417ba9b52 272 Gene3D G3DSA:3.60.10.10 12 272 9.2E-79 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG60_17415 25d1a10d137b0433a24fe96417ba9b52 272 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 263 2.5E-20 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDG60_13505 f135ace2a1c68fc27e6565b1ac6a6192 412 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 411 1.4E-148 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG60_13505 f135ace2a1c68fc27e6565b1ac6a6192 412 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 411 24.565 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG60_13505 f135ace2a1c68fc27e6565b1ac6a6192 412 Pfam PF03616 Sodium/glutamate symporter 4 380 6.9E-137 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG60_01455 7fc23a9cf8bee580ff27bdde056d497b 204 Pfam PF00561 alpha/beta hydrolase fold 4 122 7.3E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_01455 7fc23a9cf8bee580ff27bdde056d497b 204 SUPERFAMILY SSF53474 4 196 1.19E-31 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_01455 7fc23a9cf8bee580ff27bdde056d497b 204 Gene3D G3DSA:3.40.50.1820 2 197 8.4E-32 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 Gene3D G3DSA:2.40.50.100 278 396 5.4E-7 T 23-10-2018 CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 Gene3D G3DSA:2.40.50.140 314 381 5.4E-7 T 23-10-2018 CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 Pfam PF00005 ABC transporter 53 195 7.3E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 Gene3D G3DSA:3.40.50.300 30 271 1.9E-73 T 23-10-2018 CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 SMART SM00382 62 253 1.6E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 SUPERFAMILY SSF52540 38 275 1.01E-82 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_08955 db4d2dd9cbd9f347a3db89c919afeaaa 397 SUPERFAMILY SSF50331 270 396 7.82E-10 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDG60_16065 2de8e3fd3c4c45d75252b0489789f4a6 290 SUPERFAMILY SSF54637 5 112 5.6E-37 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_16065 2de8e3fd3c4c45d75252b0489789f4a6 290 Pfam PF13622 Thioesterase-like superfamily 33 282 6.4E-53 T 23-10-2018 CDG60_16065 2de8e3fd3c4c45d75252b0489789f4a6 290 Gene3D G3DSA:3.10.129.90 2 287 1.2E-94 T 23-10-2018 CDG60_16065 2de8e3fd3c4c45d75252b0489789f4a6 290 SUPERFAMILY SSF54637 115 283 1.1E-46 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_06435 4ac412a66f6631f49d8600783057cd46 326 SMART SM00978 198 324 5.6E-24 T 23-10-2018 IPR007379 Tim44-like domain CDG60_06435 4ac412a66f6631f49d8600783057cd46 326 SUPERFAMILY SSF54427 211 325 1.58E-5 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_06435 4ac412a66f6631f49d8600783057cd46 326 Pfam PF04280 Tim44-like domain 208 324 7.3E-10 T 23-10-2018 IPR007379 Tim44-like domain CDG60_01230 54645d0520344d9cef3be1e5caa240b7 138 Gene3D G3DSA:3.30.1490.190 85 138 1.2E-18 T 23-10-2018 CDG60_01230 54645d0520344d9cef3be1e5caa240b7 138 SUPERFAMILY SSF46785 6 134 4.51E-38 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01230 54645d0520344d9cef3be1e5caa240b7 138 Gene3D G3DSA:1.10.10.10 1 84 2.7E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_01230 54645d0520344d9cef3be1e5caa240b7 138 Pfam PF01475 Ferric uptake regulator family 10 129 8.3E-41 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDG60_01430 c16427d608c0951af3c23e8242647771 100 Gene3D G3DSA:1.10.225.20 1 95 1.4E-30 T 23-10-2018 CDG60_01430 c16427d608c0951af3c23e8242647771 100 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 94 6.6E-33 T 23-10-2018 IPR024476 Protein of unknown function DUF3861 CDG60_06515 757a9a25013422457596ec48394d55c7 373 Pfam PF12698 ABC-2 family transporter protein 19 364 5.4E-33 T 23-10-2018 CDG60_06515 757a9a25013422457596ec48394d55c7 373 Gene3D G3DSA:3.40.1710.10 41 171 1.7E-8 T 23-10-2018 CDG60_15370 6d791127c228f0cda489729debcb4f69 168 Pfam PF07366 SnoaL-like polyketide cyclase 52 157 1.7E-11 T 23-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 CDG60_15370 6d791127c228f0cda489729debcb4f69 168 SUPERFAMILY SSF54427 46 157 8.36E-23 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_15370 6d791127c228f0cda489729debcb4f69 168 Gene3D G3DSA:3.10.450.50 41 168 5.3E-37 T 23-10-2018 CDG60_09290 e362d0a2f5e5e4e485ba8c205d42ee07 402 SUPERFAMILY SSF50182 165 231 2.48E-11 T 23-10-2018 IPR010920 LSM domain superfamily CDG60_09290 e362d0a2f5e5e4e485ba8c205d42ee07 402 Pfam PF00924 Mechanosensitive ion channel 121 375 7.1E-52 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CDG60_10320 ae07049b91aac106ecf107a35fb2a782 199 SUPERFAMILY SSF55620 1 145 1.17E-30 T 23-10-2018 CDG60_10320 ae07049b91aac106ecf107a35fb2a782 199 Gene3D G3DSA:3.30.479.10 1 145 3.8E-23 T 23-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 CDG60_10320 ae07049b91aac106ecf107a35fb2a782 199 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 2.2E-26 T 23-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CDG60_16105 f7102f22e8cc4dafd8a9a70e02204a8c 198 Gene3D G3DSA:3.40.50.450 1 194 2.9E-73 T 23-10-2018 CDG60_16105 f7102f22e8cc4dafd8a9a70e02204a8c 198 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 9.9E-61 T 23-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDG60_16105 f7102f22e8cc4dafd8a9a70e02204a8c 198 SUPERFAMILY SSF102405 1 179 5.8E-61 T 23-10-2018 CDG60_16105 f7102f22e8cc4dafd8a9a70e02204a8c 198 Pfam PF03641 Possible lysine decarboxylase 46 175 8.2E-41 T 23-10-2018 IPR031100 LOG family CDG60_06060 8a23abd9260b09b024ba5037634a966c 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 139 347 3.2E-33 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_06060 8a23abd9260b09b024ba5037634a966c 354 Gene3D G3DSA:1.10.3720.10 109 343 1.8E-18 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_06060 8a23abd9260b09b024ba5037634a966c 354 SUPERFAMILY SSF161098 115 332 1.83E-13 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_02295 e42eff31d81995aa6c61e669cca62c7f 206 Gene3D G3DSA:2.40.160.20 21 206 1.8E-38 T 23-10-2018 CDG60_02295 e42eff31d81995aa6c61e669cca62c7f 206 Pfam PF03922 OmpW family 26 206 2.7E-32 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG60_02295 e42eff31d81995aa6c61e669cca62c7f 206 SUPERFAMILY SSF56925 26 206 6.02E-19 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 3.2E-15 T 23-10-2018 CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 3.2E-15 T 23-10-2018 CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.2E-15 T 23-10-2018 CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 3.2E-15 T 23-10-2018 CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 Pfam PF01494 FAD binding domain 9 355 4.1E-20 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 Gene3D G3DSA:3.50.50.60 10 356 2.1E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 Gene3D G3DSA:3.30.9.30 41 291 2.1E-51 T 23-10-2018 CDG60_02600 5f94ca4c26d19235a8c6df1e56b3b325 439 SUPERFAMILY SSF51905 7 398 1.14E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 SMART SM00535 25 155 3.5E-47 T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 225 28.493 T 23-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 SUPERFAMILY SSF54768 114 228 5.81E-24 T 23-10-2018 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 SUPERFAMILY SSF69065 11 164 1.31E-46 T 23-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 Gene3D G3DSA:1.10.1520.10 7 154 1.0E-43 T 23-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 SMART SM00358 162 229 1.3E-17 T 23-10-2018 IPR014720 Double-stranded RNA-binding domain CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 Pfam PF14622 Ribonuclease-III-like 24 132 1.5E-30 T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 227 5.3E-69 T 23-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 Gene3D G3DSA:3.30.160.20 160 230 2.2E-18 T 23-10-2018 CDG60_06935 f1cf58cd8e182c2638e13fc8660d8505 230 Pfam PF00035 Double-stranded RNA binding motif 162 228 1.1E-11 T 23-10-2018 IPR014720 Double-stranded RNA-binding domain CDG60_09195 450f09890bd3822b2a0f82216d5db97b 232 Pfam PF08856 Protein of unknown function (DUF1826) 25 151 8.5E-5 T 23-10-2018 IPR014955 Protein of unknown function DUF1826 CDG60_09405 c42128b3a97174e06cf7db6433e98ed9 152 Pfam PF14085 Domain of unknown function (DUF4265) 20 128 2.9E-19 T 23-10-2018 IPR025361 Protein of unknown function DUF4265 CDG60_15460 587c1366d3756f3ed06e8f2812562d44 200 SMART SM00702 22 194 1.2E-11 T 23-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CDG60_15460 587c1366d3756f3ed06e8f2812562d44 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 194 2.6E-21 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CDG60_15460 587c1366d3756f3ed06e8f2812562d44 200 SUPERFAMILY SSF51197 14 196 3.98E-5 T 23-10-2018 CDG60_15460 587c1366d3756f3ed06e8f2812562d44 200 Gene3D G3DSA:2.60.120.620 11 199 2.8E-48 T 23-10-2018 CDG60_01295 48ee8b71ee37306677417e44875c5262 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 245 1.0E-64 T 23-10-2018 CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.7E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_01295 48ee8b71ee37306677417e44875c5262 247 Gene3D G3DSA:3.40.50.720 1 247 1.3E-80 T 23-10-2018 CDG60_01295 48ee8b71ee37306677417e44875c5262 247 SUPERFAMILY SSF51735 1 245 5.31E-79 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01295 48ee8b71ee37306677417e44875c5262 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_06720 29243f3b7594a2e6388146ce236bc273 381 Gene3D G3DSA:1.20.1090.10 183 381 2.9E-70 T 23-10-2018 CDG60_06720 29243f3b7594a2e6388146ce236bc273 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 373 6.5E-120 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG60_06720 29243f3b7594a2e6388146ce236bc273 381 Gene3D G3DSA:3.40.50.1970 3 182 1.7E-53 T 23-10-2018 CDG60_06720 29243f3b7594a2e6388146ce236bc273 381 SUPERFAMILY SSF56796 6 381 1.7E-119 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 Pfam PF01946 Thi4 family 8 59 2.0E-6 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 Gene3D G3DSA:3.30.9.90 83 470 7.1E-189 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 Gene3D G3DSA:3.50.50.60 10 407 7.1E-189 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 Gene3D G3DSA:3.30.70.20 471 565 3.8E-37 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 SUPERFAMILY SSF54862 470 570 3.05E-29 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 SUPERFAMILY SSF54373 215 311 1.96E-33 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 5.1E-7 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 5.1E-7 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 466 567 2.5E-50 T 23-10-2018 CDG60_02770 50e0c3f6a537995d6c09cb5ededd3284 570 SUPERFAMILY SSF51905 6 443 2.34E-47 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_03820 488cc647593c38340ad46428fb8470c9 138 Pfam PF01575 MaoC like domain 17 115 4.7E-18 T 23-10-2018 IPR002539 MaoC-like dehydratase domain CDG60_03820 488cc647593c38340ad46428fb8470c9 138 Gene3D G3DSA:3.10.129.10 1 137 6.6E-38 T 23-10-2018 CDG60_03820 488cc647593c38340ad46428fb8470c9 138 SUPERFAMILY SSF54637 4 137 5.78E-31 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_08295 98bc17c78c5d2aeb23ea6d5401cc0502 383 Pfam PF03969 AFG1-like ATPase 15 367 5.7E-129 T 23-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 CDG60_08295 98bc17c78c5d2aeb23ea6d5401cc0502 383 Hamap MF_01919 Cell division protein ZapE [zapE]. 14 372 50.605 T 23-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CDG60_08295 98bc17c78c5d2aeb23ea6d5401cc0502 383 SUPERFAMILY SSF52540 57 190 3.84E-14 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_08295 98bc17c78c5d2aeb23ea6d5401cc0502 383 Gene3D G3DSA:3.40.50.300 21 200 8.3E-22 T 23-10-2018 CDG60_12720 d91984b6084ea4363797761976d58304 228 ProSitePatterns PS01155 Endonuclease III family signature. 106 135 - T 23-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CDG60_12720 d91984b6084ea4363797761976d58304 228 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 172 1.0E-16 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG60_12720 d91984b6084ea4363797761976d58304 228 Gene3D G3DSA:1.10.1670.10 15 207 2.2E-75 T 23-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CDG60_12720 d91984b6084ea4363797761976d58304 228 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 23-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDG60_12720 d91984b6084ea4363797761976d58304 228 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 191 207 3.4E-5 T 23-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CDG60_12720 d91984b6084ea4363797761976d58304 228 Hamap MF_00942 Endonuclease III [nth]. 1 213 36.763 T 23-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CDG60_12720 d91984b6084ea4363797761976d58304 228 Gene3D G3DSA:1.10.340.30 25 136 2.2E-75 T 23-10-2018 CDG60_12720 d91984b6084ea4363797761976d58304 228 Pfam PF00633 Helix-hairpin-helix motif 104 131 1.5E-8 T 23-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CDG60_12720 d91984b6084ea4363797761976d58304 228 SUPERFAMILY SSF48150 7 211 3.3E-70 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDG60_12720 d91984b6084ea4363797761976d58304 228 PIRSF PIRSF001435 2 214 3.3E-51 T 23-10-2018 CDG60_12720 d91984b6084ea4363797761976d58304 228 TIGRFAM TIGR01083 nth: endonuclease III 7 198 4.7E-84 T 23-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CDG60_12720 d91984b6084ea4363797761976d58304 228 SMART SM00478 42 189 2.6E-53 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG60_02950 ad1c0eaec4df0b451a13f39a5fa33e12 222 Gene3D G3DSA:3.40.50.1000 8 203 4.6E-48 T 23-10-2018 IPR023214 HAD superfamily CDG60_02950 ad1c0eaec4df0b451a13f39a5fa33e12 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 76 176 2.1E-11 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG60_02950 ad1c0eaec4df0b451a13f39a5fa33e12 222 SUPERFAMILY SSF56784 3 214 9.51E-53 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_02950 ad1c0eaec4df0b451a13f39a5fa33e12 222 Gene3D G3DSA:1.10.150.240 20 83 4.6E-48 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG60_02950 ad1c0eaec4df0b451a13f39a5fa33e12 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.2E-30 T 23-10-2018 CDG60_15750 eed1df2c1d17426cb7d274d9d5061ac3 432 SUPERFAMILY SSF55961 79 211 2.3E-6 T 23-10-2018 CDG60_04530 ec6e3896a6998a4a55e1e27f5dd172f3 455 Pfam PF12787 EcsC protein family 66 319 3.8E-20 T 23-10-2018 IPR024787 EcsC protein CDG60_04530 ec6e3896a6998a4a55e1e27f5dd172f3 455 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 162 240 3.0E-4 T 23-10-2018 CDG60_08330 8dced5c9de36fcd4558aa74f685c0f19 33 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.0E-12 T 23-10-2018 IPR012994 Membrane bound YbgT-like CDG60_08330 8dced5c9de36fcd4558aa74f685c0f19 33 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.7E-14 T 23-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CDG60_04775 7ec869e3d300435f108808ce5fe68319 114 SUPERFAMILY SSF57783 1 36 1.26E-14 T 23-10-2018 CDG60_04775 7ec869e3d300435f108808ce5fe68319 114 Gene3D G3DSA:2.20.25.10 1 39 1.8E-19 T 23-10-2018 CDG60_04775 7ec869e3d300435f108808ce5fe68319 114 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 114 1.1E-44 T 23-10-2018 IPR004624 PhnA protein CDG60_04775 7ec869e3d300435f108808ce5fe68319 114 Pfam PF03831 PhnA domain 44 114 2.8E-32 T 23-10-2018 IPR013988 PhnA protein, C-terminal CDG60_04775 7ec869e3d300435f108808ce5fe68319 114 Pfam PF08274 PhnA Zinc-Ribbon 2 30 9.3E-16 T 23-10-2018 IPR013987 PhnA protein, N-terminal CDG60_04775 7ec869e3d300435f108808ce5fe68319 114 Gene3D G3DSA:2.30.30.40 41 114 2.1E-32 T 23-10-2018 CDG60_04775 7ec869e3d300435f108808ce5fe68319 114 SUPERFAMILY SSF82057 42 114 6.87E-26 T 23-10-2018 CDG60_03760 c62a9ab6a106d64f4312e894ce7c3ae4 308 Gene3D G3DSA:3.20.10.10 134 308 2.3E-53 T 23-10-2018 CDG60_03760 c62a9ab6a106d64f4312e894ce7c3ae4 308 SUPERFAMILY SSF56752 2 304 4.06E-102 T 23-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CDG60_03760 c62a9ab6a106d64f4312e894ce7c3ae4 308 Pfam PF01063 Amino-transferase class IV 36 268 1.6E-54 T 23-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CDG60_03760 c62a9ab6a106d64f4312e894ce7c3ae4 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 307 6.5E-130 T 23-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CDG60_03760 c62a9ab6a106d64f4312e894ce7c3ae4 308 Gene3D G3DSA:3.30.470.10 7 133 5.3E-39 T 23-10-2018 CDG60_16530 3b6f932bd05828f360335f7822670a58 397 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 31 51 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16530 3b6f932bd05828f360335f7822670a58 397 Pfam PF07963 Prokaryotic N-terminal methylation motif 30 52 7.8E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16530 3b6f932bd05828f360335f7822670a58 397 Pfam PF16074 Type IV Pilus-assembly protein W 278 391 7.7E-12 T 23-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CDG60_16530 3b6f932bd05828f360335f7822670a58 397 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 30 53 8.9E-6 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_17630 69e23ac73c14880a55f010d0506aed45 159 Pfam PF02036 SCP-2 sterol transfer family 44 130 5.4E-5 T 23-10-2018 IPR003033 SCP2 sterol-binding domain CDG60_17630 69e23ac73c14880a55f010d0506aed45 159 Gene3D G3DSA:3.30.1050.10 27 137 5.2E-6 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG60_06345 cc2e349c65fd831469c752bfa911e834 484 SUPERFAMILY SSF48452 58 157 6.08E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_06345 cc2e349c65fd831469c752bfa911e834 484 Gene3D G3DSA:1.25.40.10 28 185 4.5E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_06345 cc2e349c65fd831469c752bfa911e834 484 Pfam PF14559 Tetratricopeptide repeat 107 160 1.6E-5 T 23-10-2018 CDG60_06345 cc2e349c65fd831469c752bfa911e834 484 Pfam PF04575 Protein of unknown function (DUF560) 186 484 1.9E-49 T 23-10-2018 IPR007655 Protein of unknown function DUF560 CDG60_08690 d1984052ca3ccb9235f8f01db5e9f485 110 Pfam PF05521 Phage head-tail joining protein 9 98 2.6E-19 T 23-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CDG60_08690 d1984052ca3ccb9235f8f01db5e9f485 110 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 7 89 3.2E-11 T 23-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CDG60_08690 d1984052ca3ccb9235f8f01db5e9f485 110 Gene3D G3DSA:2.40.10.270 3 108 1.1E-24 T 23-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily CDG60_09175 8fa664d2de41c4fb614b62a3465097db 176 SUPERFAMILY SSF52218 2 167 3.21E-29 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_09175 8fa664d2de41c4fb614b62a3465097db 176 Pfam PF03358 NADPH-dependent FMN reductase 3 145 3.1E-27 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG60_09175 8fa664d2de41c4fb614b62a3465097db 176 Gene3D G3DSA:3.40.50.360 1 175 4.5E-41 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG60_00925 cd96b0841a05a941a7bec42efbd56636 187 SUPERFAMILY SSF53167 5 183 1.57E-33 T 23-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CDG60_00925 cd96b0841a05a941a7bec42efbd56636 187 Gene3D G3DSA:3.40.50.1580 2 187 3.6E-38 T 23-10-2018 CDG60_00925 cd96b0841a05a941a7bec42efbd56636 187 Pfam PF01048 Phosphorylase superfamily 28 174 3.0E-14 T 23-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CDG60_06915 36f993d2127565b799720f406a991727 144 Pfam PF13279 Thioesterase-like superfamily 11 130 4.9E-10 T 23-10-2018 CDG60_06915 36f993d2127565b799720f406a991727 144 SUPERFAMILY SSF54637 1 134 1.12E-40 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_06915 36f993d2127565b799720f406a991727 144 Gene3D G3DSA:3.10.129.10 1 138 4.3E-35 T 23-10-2018 CDG60_03245 73ad3fa66a80670a7b2554eec09181f0 109 Pfam PF01638 HxlR-like helix-turn-helix 19 106 4.9E-24 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type CDG60_03245 73ad3fa66a80670a7b2554eec09181f0 109 SUPERFAMILY SSF46785 5 102 7.98E-28 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_03245 73ad3fa66a80670a7b2554eec09181f0 109 Gene3D G3DSA:1.10.10.10 3 109 8.1E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12820 ae7f190ebc426a2950c2f973328875a8 111 SUPERFAMILY SSF52833 8 109 1.78E-25 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_12820 ae7f190ebc426a2950c2f973328875a8 111 Pfam PF00085 Thioredoxin 8 107 3.2E-17 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 CDG60_12820 ae7f190ebc426a2950c2f973328875a8 111 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG60_12820 ae7f190ebc426a2950c2f973328875a8 111 Gene3D G3DSA:3.40.30.10 2 111 1.1E-22 T 23-10-2018 CDG60_04350 d1112d9e8b80b4a9c372a64d90fb1e0e 146 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 139 2.6E-8 T 23-10-2018 IPR028973 PhnB-like CDG60_04350 d1112d9e8b80b4a9c372a64d90fb1e0e 146 Gene3D G3DSA:3.10.180.10 7 146 2.4E-42 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_04350 d1112d9e8b80b4a9c372a64d90fb1e0e 146 SUPERFAMILY SSF54593 3 141 2.09E-29 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_07670 7b3f883e35b5b9d3524ca01641346344 216 PIRSF PIRSF006324 2 216 1.4E-46 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_07670 7b3f883e35b5b9d3524ca01641346344 216 Pfam PF01810 LysE type translocator 17 214 2.5E-37 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_01665 925b103b554fedc9184a4e6ab74b1058 189 SUPERFAMILY SSF55821 7 188 6.1E-42 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG60_01665 925b103b554fedc9184a4e6ab74b1058 189 Gene3D G3DSA:3.90.870.10 1 188 2.3E-50 T 23-10-2018 CDG60_01665 925b103b554fedc9184a4e6ab74b1058 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 188 34.935 T 23-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CDG60_01665 925b103b554fedc9184a4e6ab74b1058 189 Pfam PF01300 Telomere recombination 12 188 5.4E-32 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 CDG60_15540 2e1f7e81df7c5f7eee451a99562b56fa 441 SUPERFAMILY SSF53474 35 307 3.81E-30 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_15540 2e1f7e81df7c5f7eee451a99562b56fa 441 Gene3D G3DSA:3.40.50.1820 24 308 1.0E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_15540 2e1f7e81df7c5f7eee451a99562b56fa 441 Pfam PF00561 alpha/beta hydrolase fold 58 292 8.3E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_10965 58bde68aa88d2d2a73ac10c7ea3f039b 259 Pfam PF01435 Peptidase family M48 75 244 7.8E-32 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG60_13145 cb00eb110e73963ee83792bddb70435a 285 SUPERFAMILY SSF103481 186 281 1.03E-12 T 23-10-2018 CDG60_13145 cb00eb110e73963ee83792bddb70435a 285 SUPERFAMILY SSF103481 40 138 2.22E-7 T 23-10-2018 CDG60_13145 cb00eb110e73963ee83792bddb70435a 285 Pfam PF00892 EamA-like transporter family 9 136 6.1E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_13145 cb00eb110e73963ee83792bddb70435a 285 Pfam PF00892 EamA-like transporter family 154 279 1.8E-15 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_01780 7c258969d9f322cb1026c48e904b47d2 216 Pfam PF01435 Peptidase family M48 18 167 4.3E-20 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG60_01780 7c258969d9f322cb1026c48e904b47d2 216 SUPERFAMILY SSF55486 36 96 7.34E-6 T 23-10-2018 CDG60_13050 b0866ec8b06a9f1b9704a8341982086e 266 Pfam PF05675 Protein of unknown function (DUF817) 7 245 1.0E-82 T 23-10-2018 IPR008535 Protein of unknown function DUF817 CDG60_13050 b0866ec8b06a9f1b9704a8341982086e 266 PIRSF PIRSF009141 1 264 4.5E-73 T 23-10-2018 IPR008535 Protein of unknown function DUF817 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 Pfam PF13533 Biotin-lipoyl like 63 112 3.3E-13 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 SUPERFAMILY SSF111369 194 302 2.88E-12 T 23-10-2018 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 3.2E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 381 3.2E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 260 281 3.2E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 Gene3D G3DSA:1.10.287.470 97 124 6.9E-12 T 23-10-2018 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 Gene3D G3DSA:1.10.287.470 130 215 2.0E-13 T 23-10-2018 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 Gene3D G3DSA:2.40.30.170 263 382 1.7E-33 T 23-10-2018 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 SUPERFAMILY SSF111369 59 151 2.48E-10 T 23-10-2018 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 SUPERFAMILY SSF111369 141 199 2.09E-5 T 23-10-2018 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 Pfam PF13437 HlyD family secretion protein 249 366 5.5E-15 T 23-10-2018 CDG60_14600 c3e6db71c84603a278cbca2051006c46 382 Gene3D G3DSA:2.40.50.100 63 96 6.9E-12 T 23-10-2018 CDG60_09250 cedb97b96dbdd6b4a6076d6f60fba630 297 SUPERFAMILY SSF53850 88 293 8.51E-38 T 23-10-2018 CDG60_09250 cedb97b96dbdd6b4a6076d6f60fba630 297 Gene3D G3DSA:3.40.190.10 168 266 3.2E-56 T 23-10-2018 CDG60_09250 cedb97b96dbdd6b4a6076d6f60fba630 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 3.6E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_09250 cedb97b96dbdd6b4a6076d6f60fba630 297 Pfam PF03466 LysR substrate binding domain 93 293 2.5E-18 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_09250 cedb97b96dbdd6b4a6076d6f60fba630 297 Gene3D G3DSA:1.10.10.10 1 83 1.3E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09250 cedb97b96dbdd6b4a6076d6f60fba630 297 Gene3D G3DSA:3.40.190.10 88 290 3.2E-56 T 23-10-2018 CDG60_09250 cedb97b96dbdd6b4a6076d6f60fba630 297 SUPERFAMILY SSF46785 4 79 1.16E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 518 551 3.0E-5 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 150 183 1.8 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 222 254 3.2 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 82 112 120.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 335 353 15.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 446 480 3.2E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 293 326 0.036 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 370 397 0.82 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 185 217 28.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 482 514 1.0E-5 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 115 148 0.03 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Pfam PF08238 Sel1 repeat 553 588 2.0E-6 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SUPERFAMILY SSF81901 433 596 3.4E-34 T 23-10-2018 CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Gene3D G3DSA:1.25.40.10 262 405 6.9E-21 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Gene3D G3DSA:1.25.40.10 406 601 7.3E-46 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 444 480 5.2E-5 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 77 112 16.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 481 516 2.1E-6 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 328 363 69.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 517 552 3.2E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 365 400 0.0022 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 149 184 3.6E-4 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 292 327 0.0042 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 185 219 11.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 553 588 2.7E-9 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 220 255 0.0017 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SMART SM00671 113 148 1.9 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Gene3D G3DSA:1.25.40.10 35 169 5.9E-15 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SUPERFAMILY SSF81901 280 397 7.98E-16 T 23-10-2018 CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 Gene3D G3DSA:1.25.40.10 170 261 1.0E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_15260 130f5935fb82784b108ca6b7492e4f11 602 SUPERFAMILY SSF81901 59 295 1.5E-27 T 23-10-2018 CDG60_12040 e17d7628a7e6925d5bfb0ceb6991a0b9 349 PIRSF PIRSF005508 1 349 7.5E-134 T 23-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CDG60_12040 e17d7628a7e6925d5bfb0ceb6991a0b9 349 Pfam PF01758 Sodium Bile acid symporter family 51 246 6.4E-63 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG60_12040 e17d7628a7e6925d5bfb0ceb6991a0b9 349 Gene3D G3DSA:1.20.1530.20 2 341 7.3E-26 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_12040 e17d7628a7e6925d5bfb0ceb6991a0b9 349 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 6 334 1.5E-129 T 23-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CDG60_13485 971bb36547a750be84154ffb37f79aa6 173 SUPERFAMILY SSF54637 12 158 1.65E-44 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_13485 971bb36547a750be84154ffb37f79aa6 173 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 8 102 7.9E-10 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CDG60_13485 971bb36547a750be84154ffb37f79aa6 173 Pfam PF03061 Thioesterase superfamily 32 103 8.0E-19 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG60_13485 971bb36547a750be84154ffb37f79aa6 173 Gene3D G3DSA:3.10.129.10 7 161 6.7E-58 T 23-10-2018 CDG60_08045 334eafc66cd809bfb4314b1cfa9ce1d4 300 Pfam PF14257 Domain of unknown function (DUF4349) 211 289 7.0E-8 T 23-10-2018 IPR025645 Domain of unknown function DUF4349 CDG60_08045 334eafc66cd809bfb4314b1cfa9ce1d4 300 Pfam PF14257 Domain of unknown function (DUF4349) 17 161 7.1E-12 T 23-10-2018 IPR025645 Domain of unknown function DUF4349 CDG60_16050 06a7ebbdc6569f78f797a23651c3116b 281 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 50 234 26.544 T 23-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CDG60_16050 06a7ebbdc6569f78f797a23651c3116b 281 Pfam PF01926 50S ribosome-binding GTPase 64 177 8.5E-18 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG60_16050 06a7ebbdc6569f78f797a23651c3116b 281 Gene3D G3DSA:3.40.50.300 38 240 4.8E-48 T 23-10-2018 CDG60_16050 06a7ebbdc6569f78f797a23651c3116b 281 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 45 230 8.9E-72 T 23-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CDG60_16050 06a7ebbdc6569f78f797a23651c3116b 281 SUPERFAMILY SSF52540 53 236 5.95E-32 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04400 08e0257a936547d3b41e7043075ac808 473 SUPERFAMILY SSF52129 282 422 2.62E-7 T 23-10-2018 IPR029030 Caspase-like domain superfamily CDG60_04400 08e0257a936547d3b41e7043075ac808 473 Pfam PF01650 Peptidase C13 family 229 436 9.3E-37 T 23-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 CDG60_04400 08e0257a936547d3b41e7043075ac808 473 Gene3D G3DSA:3.40.50.1460 288 425 5.8E-9 T 23-10-2018 CDG60_08310 e63bafe25e21dc3c271997a64e8d5b6b 154 SMART SM00347 38 138 9.7E-11 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_08310 e63bafe25e21dc3c271997a64e8d5b6b 154 Pfam PF01047 MarR family 51 102 2.3E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG60_08310 e63bafe25e21dc3c271997a64e8d5b6b 154 SUPERFAMILY SSF46785 11 152 1.75E-27 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08310 e63bafe25e21dc3c271997a64e8d5b6b 154 Gene3D G3DSA:1.10.10.10 2 153 3.7E-28 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_07865 6a3b392dbd11e215ba7e2b9dee4407f6 276 SUPERFAMILY SSF56112 39 270 1.19E-20 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_07865 6a3b392dbd11e215ba7e2b9dee4407f6 276 Pfam PF00069 Protein kinase domain 118 265 1.1E-13 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDG60_07865 6a3b392dbd11e215ba7e2b9dee4407f6 276 Gene3D G3DSA:1.10.510.10 111 274 7.2E-19 T 23-10-2018 CDG60_07865 6a3b392dbd11e215ba7e2b9dee4407f6 276 SMART SM00220 19 272 0.001 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDG60_01445 95d4af3f049fa08d88ef0efaa3fc70ea 132 Pfam PF02566 OsmC-like protein 37 129 1.1E-15 T 23-10-2018 IPR003718 OsmC/Ohr family CDG60_01445 95d4af3f049fa08d88ef0efaa3fc70ea 132 Gene3D G3DSA:3.30.300.20 4 132 4.4E-27 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_01445 95d4af3f049fa08d88ef0efaa3fc70ea 132 SUPERFAMILY SSF82784 15 131 1.83E-26 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG60_14800 387e0fb6fe413021673688f13ab2dc4c 220 Pfam PF14094 Domain of unknown function (DUF4272) 7 215 5.2E-70 T 23-10-2018 IPR025368 Protein of unknown function DUF4272 CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 Pfam PF05175 Methyltransferase small domain 148 240 2.5E-17 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 Gene3D G3DSA:3.40.50.150 109 305 8.1E-49 T 23-10-2018 CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 PIRSF PIRSF037167 5 332 1.2E-134 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 325 49.133 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 SUPERFAMILY SSF53335 21 318 3.92E-45 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 319 1.6E-110 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 328 2.0E-75 T 23-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CDG60_08245 05444024d9e5a59edb86921c2e81f4e9 336 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 229 235 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_03365 87b51b3a3e7e4210a5d3f64c82a71b8f 415 Pfam PF03631 Virulence factor BrkB 30 277 4.5E-53 T 23-10-2018 IPR017039 Virulence factor BrkB CDG60_03365 87b51b3a3e7e4210a5d3f64c82a71b8f 415 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 2 302 21.398 T 23-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CDG60_03365 87b51b3a3e7e4210a5d3f64c82a71b8f 415 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 278 2.0E-58 T 23-10-2018 IPR017039 Virulence factor BrkB CDG60_07470 3118eb17c6ddc2e2644c217e1a912864 239 Pfam PF00072 Response regulator receiver domain 13 122 2.4E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_07470 3118eb17c6ddc2e2644c217e1a912864 239 Gene3D G3DSA:1.10.10.10 128 233 1.3E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_07470 3118eb17c6ddc2e2644c217e1a912864 239 SMART SM00448 11 121 5.9E-36 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_07470 3118eb17c6ddc2e2644c217e1a912864 239 SMART SM00862 155 231 1.8E-17 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_07470 3118eb17c6ddc2e2644c217e1a912864 239 Gene3D G3DSA:3.40.50.2300 2 127 9.3E-34 T 23-10-2018 CDG60_07470 3118eb17c6ddc2e2644c217e1a912864 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 230 2.9E-18 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_07470 3118eb17c6ddc2e2644c217e1a912864 239 SUPERFAMILY SSF52172 11 189 1.42E-38 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_08820 6965b35af1ca33adda5d87496706e22e 221 Pfam PF04239 Protein of unknown function (DUF421) 101 167 6.9E-16 T 23-10-2018 IPR007353 Protein of unknown function DUF421 CDG60_08820 6965b35af1ca33adda5d87496706e22e 221 Gene3D G3DSA:3.30.240.20 91 165 3.1E-17 T 23-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily CDG60_04765 ca5342c5e451c6364cff0035683d2c42 148 Gene3D G3DSA:3.30.530.20 2 144 2.4E-38 T 23-10-2018 IPR023393 START-like domain superfamily CDG60_04765 ca5342c5e451c6364cff0035683d2c42 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 140 8.0E-28 T 23-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDG60_04765 ca5342c5e451c6364cff0035683d2c42 148 SUPERFAMILY SSF55961 4 142 2.96E-40 T 23-10-2018 CDG60_15105 8695caf9eac1d915c4884fb8b7b22169 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 6.4E-37 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_15105 8695caf9eac1d915c4884fb8b7b22169 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 85 96 - T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_15105 8695caf9eac1d915c4884fb8b7b22169 161 SUPERFAMILY SSF55083 1 135 3.01E-47 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_15105 8695caf9eac1d915c4884fb8b7b22169 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 2.0E-41 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_15105 8695caf9eac1d915c4884fb8b7b22169 161 Gene3D G3DSA:3.30.70.560 1 151 1.4E-50 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG60_01690 a641d0b744e3008b2d77b4967776679b 690 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 60 690 2.7E-221 T 23-10-2018 IPR010100 TonB-dependent copper receptor CDG60_01690 a641d0b744e3008b2d77b4967776679b 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 154 1.6E-11 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_01690 a641d0b744e3008b2d77b4967776679b 690 Gene3D G3DSA:2.170.130.10 62 164 8.1E-11 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_01690 a641d0b744e3008b2d77b4967776679b 690 Gene3D G3DSA:2.40.170.20 168 690 1.2E-52 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_01690 a641d0b744e3008b2d77b4967776679b 690 Pfam PF00593 TonB dependent receptor 212 689 6.7E-32 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_01690 a641d0b744e3008b2d77b4967776679b 690 SUPERFAMILY SSF56935 62 690 7.33E-78 T 23-10-2018 CDG60_11550 edfdec068a2871a72c05180485262a57 257 Gene3D G3DSA:3.40.50.720 1 257 1.9E-78 T 23-10-2018 CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.2E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.2E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.2E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.2E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.2E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.2E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 4.8E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 4.8E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.8E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG60_11550 edfdec068a2871a72c05180485262a57 257 SUPERFAMILY SSF51735 11 251 1.05E-78 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_11550 edfdec068a2871a72c05180485262a57 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 2.1E-58 T 23-10-2018 CDG60_12785 87751645a721311ce0687dfb3ec868a1 533 PIRSF PIRSF001362 289 409 4.5E-13 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG60_12785 87751645a721311ce0687dfb3ec868a1 533 PIRSF PIRSF001362 4 294 1.2E-30 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG60_12785 87751645a721311ce0687dfb3ec868a1 533 PIRSF PIRSF001362 415 531 1.4E-6 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG60_12785 87751645a721311ce0687dfb3ec868a1 533 SUPERFAMILY SSF51621 15 515 8.07E-125 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG60_12785 87751645a721311ce0687dfb3ec868a1 533 Pfam PF00463 Isocitrate lyase family 98 270 3.9E-24 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG60_12785 87751645a721311ce0687dfb3ec868a1 533 Pfam PF00463 Isocitrate lyase family 432 521 1.9E-10 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG60_12785 87751645a721311ce0687dfb3ec868a1 533 Pfam PF00463 Isocitrate lyase family 317 396 1.6E-11 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG60_00370 c7026539fda259fb00ae3cba286fcf89 215 Pfam PF00239 Resolvase, N terminal domain 20 154 1.3E-33 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG60_00370 c7026539fda259fb00ae3cba286fcf89 215 SUPERFAMILY SSF53041 20 153 6.28E-34 T 23-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDG60_00370 c7026539fda259fb00ae3cba286fcf89 215 SUPERFAMILY SSF46689 159 203 7.17E-5 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_00370 c7026539fda259fb00ae3cba286fcf89 215 Gene3D G3DSA:3.40.50.1390 19 144 3.1E-33 T 23-10-2018 CDG60_00370 c7026539fda259fb00ae3cba286fcf89 215 SMART SM00857 19 157 1.8E-41 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG60_00370 c7026539fda259fb00ae3cba286fcf89 215 ProSitePatterns PS00397 Site-specific recombinases active site. 22 30 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG60_05405 6984e1cbbbf13d0febfa0334973c76c9 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 23-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CDG60_05405 6984e1cbbbf13d0febfa0334973c76c9 193 Gene3D G3DSA:3.40.50.1470 1 193 1.7E-74 T 23-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CDG60_05405 6984e1cbbbf13d0febfa0334973c76c9 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 188 4.8E-64 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDG60_05405 6984e1cbbbf13d0febfa0334973c76c9 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 6.5E-54 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDG60_05405 6984e1cbbbf13d0febfa0334973c76c9 193 SUPERFAMILY SSF53178 5 192 3.79E-69 T 23-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CDG60_05405 6984e1cbbbf13d0febfa0334973c76c9 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 181 34.821 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDG60_05405 6984e1cbbbf13d0febfa0334973c76c9 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 23-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CDG60_15785 d563c0a5957969bfb0154f502710d25b 679 SUPERFAMILY SSF55486 9 671 1.1E-183 T 23-10-2018 CDG60_15785 d563c0a5957969bfb0154f502710d25b 679 Gene3D G3DSA:1.10.1370.40 12 669 1.1E-241 T 23-10-2018 CDG60_15785 d563c0a5957969bfb0154f502710d25b 679 Pfam PF01432 Peptidase family M3 221 670 3.4E-144 T 23-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CDG60_15785 d563c0a5957969bfb0154f502710d25b 679 Gene3D G3DSA:1.10.1370.10 140 604 1.1E-241 T 23-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDG60_06605 0530817518f6d2b9f5f0a499d86af1ee 617 TIGRFAM TIGR04212 GlyGly_RbtA: rhombotarget A 1 615 2.5E-215 T 23-10-2018 IPR026454 Rhombotarget A CDG60_06605 0530817518f6d2b9f5f0a499d86af1ee 617 SUPERFAMILY SSF51126 10 370 3.45E-7 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor CDG60_06605 0530817518f6d2b9f5f0a499d86af1ee 617 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 22 47 4.1E-10 T 23-10-2018 IPR026457 CSLREA domain CDG60_03830 d2f4d6151637795527a4ab3ca9d2fb00 283 Pfam PF00535 Glycosyl transferase family 2 10 168 3.1E-28 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDG60_03830 d2f4d6151637795527a4ab3ca9d2fb00 283 SUPERFAMILY SSF53448 4 277 8.63E-57 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_03830 d2f4d6151637795527a4ab3ca9d2fb00 283 Gene3D G3DSA:3.90.550.10 1 260 1.7E-65 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_00940 6b44faf42cb6e62b596372c3447356df 269 Gene3D G3DSA:1.10.3720.10 57 260 2.2E-27 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_00940 6b44faf42cb6e62b596372c3447356df 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 5.3E-29 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_00940 6b44faf42cb6e62b596372c3447356df 269 SUPERFAMILY SSF161098 67 249 1.83E-34 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 Pfam PF00563 EAL domain 460 693 1.6E-23 T 23-10-2018 IPR001633 EAL domain CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 SUPERFAMILY SSF55785 146 226 1.03E-7 T 23-10-2018 IPR035965 PAS domain superfamily CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 SUPERFAMILY SSF52172 19 157 2.56E-5 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 SMART SM00052 453 699 1.6E-7 T 23-10-2018 IPR001633 EAL domain CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 SUPERFAMILY SSF141868 459 693 6.15E-24 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 Gene3D G3DSA:3.20.20.450 456 701 1.4E-26 T 23-10-2018 IPR035919 EAL domain superfamily CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 224 1.3E-6 T 23-10-2018 IPR000014 PAS domain CDG60_07250 8f74167041c5e6d35fc4be0a9ee1df98 704 Gene3D G3DSA:3.30.450.20 142 245 1.1E-7 T 23-10-2018 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 1.3E-64 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 Gene3D G3DSA:3.30.70.580 1 106 6.4E-34 T 23-10-2018 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 PIRSF PIRSF001430 1 256 1.0E-74 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 Gene3D G3DSA:3.30.70.660 107 244 3.3E-47 T 23-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 Pfam PF01416 tRNA pseudouridine synthase 9 104 6.4E-6 T 23-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 Pfam PF01416 tRNA pseudouridine synthase 144 246 3.7E-29 T 23-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 32.843 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_03180 dfe561d95287c9be4e0f4571a2bfc287 265 SUPERFAMILY SSF55120 1 260 1.04E-85 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG60_11915 bd60c73e87138b2039faac88b2e57945 173 SUPERFAMILY SSF52317 3 153 2.75E-29 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_11915 bd60c73e87138b2039faac88b2e57945 173 Pfam PF01965 DJ-1/PfpI family 3 167 2.3E-33 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDG60_11915 bd60c73e87138b2039faac88b2e57945 173 Gene3D G3DSA:3.40.50.880 1 171 6.8E-33 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 Gene3D G3DSA:3.40.190.10 101 272 8.8E-34 T 23-10-2018 CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 Pfam PF03466 LysR substrate binding domain 89 272 4.8E-25 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 Gene3D G3DSA:3.40.190.10 161 260 8.8E-34 T 23-10-2018 CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 Gene3D G3DSA:1.10.10.10 5 94 4.7E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 SUPERFAMILY SSF53850 90 283 3.98E-30 T 23-10-2018 CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.0E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12070 05101ec9e074bcb5fbcc5715f6a5c860 296 SUPERFAMILY SSF46785 3 83 5.64E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_03390 7ba1a1a2208c28aa2b444906268cfd65 340 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 337 47.767 T 23-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CDG60_03390 7ba1a1a2208c28aa2b444906268cfd65 340 SUPERFAMILY SSF51445 3 287 4.84E-78 T 23-10-2018 IPR017853 Glycoside hydrolase superfamily CDG60_03390 7ba1a1a2208c28aa2b444906268cfd65 340 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 290 1.7E-72 T 23-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CDG60_03390 7ba1a1a2208c28aa2b444906268cfd65 340 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 23-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CDG60_03390 7ba1a1a2208c28aa2b444906268cfd65 340 Gene3D G3DSA:3.20.20.300 1 339 1.0E-110 T 23-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CDG60_06110 6580905c55d5498e8ef9a4d5f7085e0e 278 Gene3D G3DSA:3.20.20.220 1 278 9.7E-90 T 23-10-2018 CDG60_06110 6580905c55d5498e8ef9a4d5f7085e0e 278 SUPERFAMILY SSF51730 3 276 1.63E-84 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like CDG60_06110 6580905c55d5498e8ef9a4d5f7085e0e 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 272 2.1E-90 T 23-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CDG60_06110 6580905c55d5498e8ef9a4d5f7085e0e 278 Pfam PF02219 Methylenetetrahydrofolate reductase 3 272 1.1E-78 T 23-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CDG60_04810 acc1cdb160ee58437466945cb862a54d 350 Pfam PF06674 Protein of unknown function (DUF1176) 30 342 1.5E-90 T 23-10-2018 IPR009560 Protein of unknown function DUF1176 CDG60_05090 42f21730cd5483715c7f419135ab33ab 495 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 491 7.2E-221 T 23-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CDG60_05090 42f21730cd5483715c7f419135ab33ab 495 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.4E-118 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG60_05090 42f21730cd5483715c7f419135ab33ab 495 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG60_05090 42f21730cd5483715c7f419135ab33ab 495 Pfam PF00474 Sodium:solute symporter family 35 437 1.2E-131 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG60_05090 42f21730cd5483715c7f419135ab33ab 495 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG60_05090 42f21730cd5483715c7f419135ab33ab 495 Gene3D G3DSA:1.20.1730.10 24 494 1.7E-92 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily CDG60_12690 5e985c08bbb08b6145c239681b9b93d2 258 Pfam PF14302 Domain of unknown function (DUF4377) 167 251 1.1E-25 T 23-10-2018 IPR025485 Domain of unknown function DUF4377 CDG60_12690 5e985c08bbb08b6145c239681b9b93d2 258 Pfam PF03724 META domain 48 139 3.5E-16 T 23-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CDG60_12690 5e985c08bbb08b6145c239681b9b93d2 258 Gene3D G3DSA:2.40.128.270 23 149 1.6E-14 T 23-10-2018 IPR038670 HslJ-like superfamily CDG60_17470 8314c3d43463b596317bfd482267ea72 167 SUPERFAMILY SSF55729 3 166 8.84E-38 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_17470 8314c3d43463b596317bfd482267ea72 167 Gene3D G3DSA:3.40.630.30 1 167 9.8E-56 T 23-10-2018 CDG60_17470 8314c3d43463b596317bfd482267ea72 167 Pfam PF13420 Acetyltransferase (GNAT) domain 5 159 9.5E-24 T 23-10-2018 CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 Gene3D G3DSA:1.10.287.130 171 283 3.1E-19 T 23-10-2018 CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 SUPERFAMILY SSF47384 205 282 1.53E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 Gene3D G3DSA:3.30.565.10 289 442 4.7E-31 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 SMART SM00388 221 283 1.5E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 437 5.9E-18 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.7E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.7E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.7E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 SMART SM00387 329 439 8.7E-24 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 SUPERFAMILY SSF55874 273 437 2.62E-31 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_05135 9b3f270531c901c88eb4ebe5f38a5f05 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 282 1.5E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 Pfam PF00842 Alanine racemase, C-terminal domain 234 354 3.3E-39 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 Hamap MF_01201 Alanine racemase. 1 357 32.441 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 Gene3D G3DSA:2.40.37.10 8 351 7.8E-133 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 Gene3D G3DSA:3.20.20.10 10 218 7.8E-133 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 SUPERFAMILY SSF50621 227 355 6.98E-45 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 TIGRFAM TIGR00492 alr: alanine racemase 2 355 1.9E-105 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 SUPERFAMILY SSF51419 8 235 6.69E-60 T 23-10-2018 IPR029066 PLP-binding barrel CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 Pfam PF01168 Alanine racemase, N-terminal domain 8 220 8.3E-59 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 123 135 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 60 78 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 339 352 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 267 282 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 26 42 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 193 220 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 250 265 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 288 305 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 PRINTS PR00992 Alanine racemase signature 155 166 1.9E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_11135 397d20f275db0dd67c990c9a8fb4d4ca 357 SMART SM01005 234 357 6.4E-62 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG60_03595 b1922e36cda2a2848d89fb3fdaf3bf4e 396 Gene3D G3DSA:1.20.1250.20 7 385 2.2E-37 T 23-10-2018 CDG60_03595 b1922e36cda2a2848d89fb3fdaf3bf4e 396 Pfam PF07690 Major Facilitator Superfamily 20 350 3.9E-26 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_03595 b1922e36cda2a2848d89fb3fdaf3bf4e 396 SUPERFAMILY SSF103473 6 385 9.29E-48 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 ProSitePatterns PS01128 Shikimate kinase signature. 65 90 - T 23-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 Gene3D G3DSA:3.40.50.300 3 178 2.0E-60 T 23-10-2018 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 Pfam PF01202 Shikimate kinase 18 173 5.7E-56 T 23-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 SUPERFAMILY SSF52540 11 173 3.6E-33 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 Hamap MF_00109 Shikimate kinase [aroK]. 9 175 30.284 T 23-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 PRINTS PR01100 Shikimate kinase family signature 12 27 7.4E-27 T 23-10-2018 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 PRINTS PR01100 Shikimate kinase family signature 64 72 7.4E-27 T 23-10-2018 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 PRINTS PR01100 Shikimate kinase family signature 36 49 7.4E-27 T 23-10-2018 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 PRINTS PR01100 Shikimate kinase family signature 82 91 7.4E-27 T 23-10-2018 CDG60_16740 482836605ae47e6957d85a0d2eac453c 179 PRINTS PR01100 Shikimate kinase family signature 103 120 7.4E-27 T 23-10-2018 CDG60_15500 f0aef49ab288eb36751f780ac7e926e5 360 SUPERFAMILY SSF52540 118 294 5.4E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_15500 f0aef49ab288eb36751f780ac7e926e5 360 Pfam PF02562 PhoH-like protein 119 322 1.3E-95 T 23-10-2018 IPR003714 PhoH-like protein GO:0005524 CDG60_15500 f0aef49ab288eb36751f780ac7e926e5 360 Gene3D G3DSA:3.40.50.300 116 322 1.6E-75 T 23-10-2018 CDG60_00590 4e48bcb47b82985737e85e24abb3d7c2 280 Pfam PF00905 Penicillin binding protein transpeptidase domain 67 265 3.0E-32 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG60_00590 4e48bcb47b82985737e85e24abb3d7c2 280 SUPERFAMILY SSF56601 55 272 8.28E-33 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_00590 4e48bcb47b82985737e85e24abb3d7c2 280 Gene3D G3DSA:3.40.710.10 29 277 5.2E-85 T 23-10-2018 CDG60_00590 4e48bcb47b82985737e85e24abb3d7c2 280 ProSitePatterns PS00337 Beta-lactamase class-D active site. 81 91 - T 23-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 CDG60_02115 8e1e69c548d997151b1a98efdbde525e 240 Gene3D G3DSA:1.20.58.220 3 121 4.1E-38 T 23-10-2018 IPR038078 PhoU-like domain superfamily CDG60_02115 8e1e69c548d997151b1a98efdbde525e 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 224 1.1E-64 T 23-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CDG60_02115 8e1e69c548d997151b1a98efdbde525e 240 Pfam PF01895 PhoU domain 132 216 6.7E-16 T 23-10-2018 IPR026022 PhoU domain CDG60_02115 8e1e69c548d997151b1a98efdbde525e 240 Pfam PF01895 PhoU domain 29 114 2.7E-17 T 23-10-2018 IPR026022 PhoU domain CDG60_02115 8e1e69c548d997151b1a98efdbde525e 240 Gene3D G3DSA:1.20.58.220 122 235 1.2E-33 T 23-10-2018 IPR038078 PhoU-like domain superfamily CDG60_02115 8e1e69c548d997151b1a98efdbde525e 240 SUPERFAMILY SSF109755 14 235 8.9E-66 T 23-10-2018 CDG60_02115 8e1e69c548d997151b1a98efdbde525e 240 PIRSF PIRSF003107 9 230 9.5E-65 T 23-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CDG60_17660 3318deea8f6ce0f0d715d879762d880a 209 Pfam PF00857 Isochorismatase family 5 196 5.2E-32 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG60_17660 3318deea8f6ce0f0d715d879762d880a 209 Gene3D G3DSA:3.40.50.850 2 208 3.0E-80 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_17660 3318deea8f6ce0f0d715d879762d880a 209 SUPERFAMILY SSF52499 3 207 1.05E-52 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_01765 0d301009f3420b1d75bccfb096061eda 329 Gene3D G3DSA:3.40.50.1820 34 327 2.1E-33 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_01765 0d301009f3420b1d75bccfb096061eda 329 Pfam PF12146 Serine aminopeptidase, S33 64 304 2.1E-18 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG60_01765 0d301009f3420b1d75bccfb096061eda 329 SUPERFAMILY SSF53474 33 325 1.46E-34 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_01765 0d301009f3420b1d75bccfb096061eda 329 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 4.0E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_01765 0d301009f3420b1d75bccfb096061eda 329 PRINTS PR00111 Alpha/beta hydrolase fold signature 267 281 4.0E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_01765 0d301009f3420b1d75bccfb096061eda 329 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 109 4.0E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_11185 4bf0c9fc8566423c87e7400b91a4c80e 293 Gene3D G3DSA:1.20.1530.20 2 287 1.6E-65 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_11185 4bf0c9fc8566423c87e7400b91a4c80e 293 Pfam PF01758 Sodium Bile acid symporter family 11 193 7.6E-25 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG60_17380 95c3317fe5ee87a454dc1a55b9853ea0 284 Pfam PF03799 Cell division protein FtsQ 132 245 5.9E-16 T 23-10-2018 IPR005548 Cell division protein FtsQ/DivIB CDG60_17380 95c3317fe5ee87a454dc1a55b9853ea0 284 Gene3D G3DSA:3.40.50.11690 130 257 1.4E-30 T 23-10-2018 CDG60_17380 95c3317fe5ee87a454dc1a55b9853ea0 284 Gene3D G3DSA:3.10.20.310 59 127 2.9E-12 T 23-10-2018 CDG60_17380 95c3317fe5ee87a454dc1a55b9853ea0 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 29 253 21.845 T 23-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 CDG60_17380 95c3317fe5ee87a454dc1a55b9853ea0 284 Pfam PF08478 POTRA domain, FtsQ-type 60 125 1.1E-11 T 23-10-2018 IPR013685 POTRA domain, FtsQ-type CDG60_08450 86eb3e2d5ee4f303cb06698bec0295f3 117 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 9 113 21.627 T 23-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CDG60_08450 86eb3e2d5ee4f303cb06698bec0295f3 117 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 8 112 5.7E-34 T 23-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CDG60_10630 683ffb7acc6128b6c3ce5ff586b3a242 189 Pfam PF04186 FxsA cytoplasmic membrane protein 6 112 2.6E-18 T 23-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CDG60_07030 30158e2a1d1723054b18d43eefea7cbe 309 TIGRFAM TIGR00688 rarD: protein RarD 3 255 1.1E-46 T 23-10-2018 IPR004626 RarD protein GO:0005887 CDG60_07030 30158e2a1d1723054b18d43eefea7cbe 309 Pfam PF00892 EamA-like transporter family 3 140 1.5E-10 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_07030 30158e2a1d1723054b18d43eefea7cbe 309 SUPERFAMILY SSF103481 36 144 4.05E-8 T 23-10-2018 CDG60_16590 0498d22dd70c59b41769cbfecdad771e 541 Pfam PF15864 Protein glycosylation ligase 152 177 2.5E-10 T 23-10-2018 IPR031726 Protein glycosylation ligase domain CDG60_16590 0498d22dd70c59b41769cbfecdad771e 541 Pfam PF04932 O-Antigen ligase 191 337 2.6E-14 T 23-10-2018 IPR007016 O-antigen ligase-related CDG60_16590 0498d22dd70c59b41769cbfecdad771e 541 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 358 528 1.1E-22 T 23-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CDG60_12750 8626fafd26b608d16c8cc55f5ae23dc9 181 SUPERFAMILY SSF53335 5 175 4.8E-45 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_12750 8626fafd26b608d16c8cc55f5ae23dc9 181 PIRSF PIRSF004553 4 181 9.0E-47 T 23-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CDG60_12750 8626fafd26b608d16c8cc55f5ae23dc9 181 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 180 2.3E-51 T 23-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CDG60_12750 8626fafd26b608d16c8cc55f5ae23dc9 181 Pfam PF03602 Conserved hypothetical protein 95 5 177 5.2E-51 T 23-10-2018 CDG60_12750 8626fafd26b608d16c8cc55f5ae23dc9 181 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_12750 8626fafd26b608d16c8cc55f5ae23dc9 181 Gene3D G3DSA:3.40.50.150 1 181 6.3E-53 T 23-10-2018 CDG60_04580 48660f9135cf343e07498232b4385f12 1019 Gene3D G3DSA:3.40.50.300 636 939 4.2E-112 T 23-10-2018 CDG60_04580 48660f9135cf343e07498232b4385f12 1019 SUPERFAMILY SSF52540 613 926 3.45E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04580 48660f9135cf343e07498232b4385f12 1019 Gene3D G3DSA:1.10.10.10 952 1018 3.7E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04580 48660f9135cf343e07498232b4385f12 1019 SMART SM00843 957 1019 1.4E-30 T 23-10-2018 IPR018541 FtsK gamma domain CDG60_04580 48660f9135cf343e07498232b4385f12 1019 Pfam PF09397 Ftsk gamma domain 960 1019 1.6E-25 T 23-10-2018 IPR018541 FtsK gamma domain CDG60_04580 48660f9135cf343e07498232b4385f12 1019 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 13 172 3.8E-28 T 23-10-2018 IPR025199 DNA translocase FtsK, 4TM region CDG60_04580 48660f9135cf343e07498232b4385f12 1019 Gene3D G3DSA:3.30.980.40 530 635 2.5E-32 T 23-10-2018 CDG60_04580 48660f9135cf343e07498232b4385f12 1019 SUPERFAMILY SSF46785 957 1019 1.09E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_04580 48660f9135cf343e07498232b4385f12 1019 Pfam PF01580 FtsK/SpoIIIE family 639 852 1.9E-64 T 23-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CDG60_01675 032adb975301dd0eee01fe7bcb6706df 384 Pfam PF01476 LysM domain 58 102 7.7E-15 T 23-10-2018 IPR018392 LysM domain CDG60_01675 032adb975301dd0eee01fe7bcb6706df 384 Gene3D G3DSA:3.10.350.10 57 102 8.5E-14 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_01675 032adb975301dd0eee01fe7bcb6706df 384 SUPERFAMILY SSF54106 56 104 1.31E-7 T 23-10-2018 CDG60_16275 b7c86f5011c2e95bbac5e1d029e0bed2 125 SUPERFAMILY SSF141066 31 124 2.88E-20 T 23-10-2018 IPR036331 Chagasin-like superfamily CDG60_16275 b7c86f5011c2e95bbac5e1d029e0bed2 125 Pfam PF09394 Chagasin family peptidase inhibitor I42 36 118 2.0E-19 T 23-10-2018 IPR018990 Proteinase inhibitor I42, chagasin CDG60_16275 b7c86f5011c2e95bbac5e1d029e0bed2 125 Gene3D G3DSA:2.60.40.2020 19 125 3.5E-24 T 23-10-2018 IPR036331 Chagasin-like superfamily CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 Gene3D G3DSA:3.10.420.10 1 152 1.4E-49 T 23-10-2018 IPR035958 SecB-like superfamily CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 5.1E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 5.1E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 5.1E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 5.1E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 30.504 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 SUPERFAMILY SSF54611 2 140 6.1E-45 T 23-10-2018 IPR035958 SecB-like superfamily CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 137 1.4E-44 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG60_15295 5cb7b887340e10d80bc0092b06fb2338 152 Pfam PF02556 Preprotein translocase subunit SecB 5 141 2.0E-48 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG60_14295 f6136cb8ca66f5dce4bbbc3a85582ce1 95 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 11 50 1.0E-14 T 23-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDG60_14295 f6136cb8ca66f5dce4bbbc3a85582ce1 95 Pfam PF06099 Phenol hydroxylase subunit 6 58 1.1E-21 T 23-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDG60_14295 f6136cb8ca66f5dce4bbbc3a85582ce1 95 PIRSF PIRSF000039 1 93 1.0E-36 T 23-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 CDG60_12780 c0d7cf090d0fc0d34f24f1c151d96a1d 164 Pfam PF04170 NlpE N-terminal domain 67 146 3.3E-23 T 23-10-2018 IPR007298 Copper resistance lipoprotein NlpE CDG60_12780 c0d7cf090d0fc0d34f24f1c151d96a1d 164 Gene3D G3DSA:2.40.128.640 54 163 3.6E-31 T 23-10-2018 CDG60_04665 327256c3827f2a71b7e46a30797d40d6 107 SUPERFAMILY SSF54285 5 78 1.96E-17 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDG60_04665 327256c3827f2a71b7e46a30797d40d6 107 Hamap MF_00460 Protein RnfH [rnfH]. 5 94 19.674 T 23-10-2018 IPR005346 RnfH protein CDG60_04665 327256c3827f2a71b7e46a30797d40d6 107 Gene3D G3DSA:3.10.20.280 1 88 7.1E-24 T 23-10-2018 IPR037021 RnfH superfamily CDG60_04665 327256c3827f2a71b7e46a30797d40d6 107 Pfam PF03658 RnfH family Ubiquitin 6 86 1.9E-23 T 23-10-2018 IPR005346 RnfH protein CDG60_04255 4c4dc4988c31802e7beca13b81a6a89e 437 Pfam PF00083 Sugar (and other) transporter 21 230 3.8E-25 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG60_04255 4c4dc4988c31802e7beca13b81a6a89e 437 Pfam PF00083 Sugar (and other) transporter 259 431 1.1E-7 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG60_04255 4c4dc4988c31802e7beca13b81a6a89e 437 Gene3D G3DSA:1.20.1250.20 16 436 9.5E-64 T 23-10-2018 CDG60_04255 4c4dc4988c31802e7beca13b81a6a89e 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 27 419 5.5E-139 T 23-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 CDG60_04255 4c4dc4988c31802e7beca13b81a6a89e 437 SUPERFAMILY SSF103473 8 432 7.85E-65 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_04255 4c4dc4988c31802e7beca13b81a6a89e 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 317 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_17080 2011379ef5c3c9d04837f3837f38495b 307 SUPERFAMILY SSF46785 3 112 5.44E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_17080 2011379ef5c3c9d04837f3837f38495b 307 Gene3D G3DSA:1.10.10.10 3 89 1.1E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_17080 2011379ef5c3c9d04837f3837f38495b 307 Gene3D G3DSA:3.40.190.10 91 291 2.0E-46 T 23-10-2018 CDG60_17080 2011379ef5c3c9d04837f3837f38495b 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.5E-12 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_17080 2011379ef5c3c9d04837f3837f38495b 307 Gene3D G3DSA:3.40.190.10 165 266 2.0E-46 T 23-10-2018 CDG60_17080 2011379ef5c3c9d04837f3837f38495b 307 SUPERFAMILY SSF53850 89 299 7.24E-33 T 23-10-2018 CDG60_17080 2011379ef5c3c9d04837f3837f38495b 307 Pfam PF03466 LysR substrate binding domain 88 294 1.6E-33 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_13015 756ca587546a91ddcfccbabc42e5fb93 228 SUPERFAMILY SSF52499 7 207 8.5E-43 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_13015 756ca587546a91ddcfccbabc42e5fb93 228 Gene3D G3DSA:3.40.50.850 4 207 1.5E-44 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_13015 756ca587546a91ddcfccbabc42e5fb93 228 Pfam PF00857 Isochorismatase family 15 168 3.6E-27 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.2E-35 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.2E-35 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.2E-35 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.2E-35 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 23-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 Gene3D G3DSA:3.90.1150.10 11 391 5.6E-148 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 Gene3D G3DSA:3.40.640.10 60 301 5.6E-148 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 SUPERFAMILY SSF53383 1 398 8.17E-113 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_09335 c2fb9229682c58bb5f54678b0ad874db 401 Pfam PF00155 Aminotransferase class I and II 26 393 4.0E-77 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 SMART SM00986 62 223 2.6E-35 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 SMART SM00987 62 223 2.6E-35 T 23-10-2018 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 Pfam PF03167 Uracil DNA glycosylase superfamily 67 222 3.7E-24 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 SUPERFAMILY SSF52141 15 235 2.18E-88 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 Gene3D G3DSA:3.40.470.10 9 237 4.5E-96 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 17 234 39.822 T 23-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 70 79 - T 23-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_10315 2fe3f316a0c550355613e2bd69385557 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 18 227 5.5E-81 T 23-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 SUPERFAMILY SSF51604 127 367 1.31E-62 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 Gene3D G3DSA:3.20.20.120 118 353 1.8E-117 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 125 1.0E-29 T 23-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 SUPERFAMILY SSF54826 3 126 5.89E-32 T 23-10-2018 CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 23-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 SMART SM00922 144 241 2.7E-20 T 23-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 Pfam PF13378 Enolase C-terminal domain-like 148 361 7.0E-46 T 23-10-2018 IPR029065 Enolase C-terminal domain-like CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 2 369 6.6E-177 T 23-10-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 CDG60_14350 50cf6e6e005da3694d5e388d55847889 369 Gene3D G3DSA:3.30.390.10 28 364 1.8E-117 T 23-10-2018 IPR029017 Enolase-like, N-terminal CDG60_14180 8bbf262b952728a49378d4933d1072cf 180 SMART SM00903 36 177 2.0E-38 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_14180 8bbf262b952728a49378d4933d1072cf 180 SUPERFAMILY SSF50475 29 177 2.19E-38 T 23-10-2018 CDG60_14180 8bbf262b952728a49378d4933d1072cf 180 Pfam PF01613 Flavin reductase like domain 36 178 1.4E-27 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_14180 8bbf262b952728a49378d4933d1072cf 180 Gene3D G3DSA:2.30.110.10 14 180 1.3E-38 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG60_11190 27ce24532ff9b6c339896b9c33cb519a 295 Gene3D G3DSA:1.20.1530.20 3 281 4.8E-74 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_11190 27ce24532ff9b6c339896b9c33cb519a 295 Pfam PF01758 Sodium Bile acid symporter family 11 195 1.2E-34 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG60_03435 268ae8255fd961a695f63b27fd5fcc93 258 SUPERFAMILY SSF69572 7 249 9.16E-58 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDG60_03435 268ae8255fd961a695f63b27fd5fcc93 258 Pfam PF00899 ThiF family 22 251 4.8E-37 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDG60_03435 268ae8255fd961a695f63b27fd5fcc93 258 Gene3D G3DSA:3.40.50.720 4 257 1.8E-89 T 23-10-2018 CDG60_08255 537f5c9a2cfde2d18fe1ac4f4f24ed1a 179 Gene3D G3DSA:3.40.630.30 1 159 1.3E-16 T 23-10-2018 CDG60_08255 537f5c9a2cfde2d18fe1ac4f4f24ed1a 179 SUPERFAMILY SSF55729 1 157 2.06E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_08255 537f5c9a2cfde2d18fe1ac4f4f24ed1a 179 Pfam PF00583 Acetyltransferase (GNAT) family 51 146 8.0E-11 T 23-10-2018 IPR000182 GNAT domain CDG60_05640 d5c10be77be57ad6ef4349f41df420a1 309 PIRSF PIRSF016660 1 306 5.7E-131 T 23-10-2018 IPR008526 Inner membrane protein YedI CDG60_05640 d5c10be77be57ad6ef4349f41df420a1 309 Pfam PF05661 Protein of unknown function (DUF808) 3 294 4.4E-118 T 23-10-2018 IPR008526 Inner membrane protein YedI CDG60_04360 1bee3fb748ee6adc2c87dcc45c1be432 174 Gene3D G3DSA:3.30.700.10 9 174 6.8E-13 T 23-10-2018 CDG60_04360 1bee3fb748ee6adc2c87dcc45c1be432 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.5E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_04360 1bee3fb748ee6adc2c87dcc45c1be432 174 Pfam PF12019 Type II transport protein GspH 46 163 2.7E-13 T 23-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CDG60_04360 1bee3fb748ee6adc2c87dcc45c1be432 174 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 1.2E-6 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_04360 1bee3fb748ee6adc2c87dcc45c1be432 174 SUPERFAMILY SSF54523 9 154 1.1E-18 T 23-10-2018 CDG60_00510 20cdcce9212c3621488d52bc509e691c 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 92 7.0E-7 T 23-10-2018 IPR009241 Toxin HigB-like CDG60_00510 20cdcce9212c3621488d52bc509e691c 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 5.3E-36 T 23-10-2018 IPR014056 Addiction module killer protein, predicted CDG60_00510 20cdcce9212c3621488d52bc509e691c 98 PIRSF PIRSF028744 1 98 1.5E-36 T 23-10-2018 IPR014056 Addiction module killer protein, predicted CDG60_10065 fe924e14a2d2c2a0b88c968cec805415 157 SUPERFAMILY SSF46785 2 132 1.53E-38 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_10065 fe924e14a2d2c2a0b88c968cec805415 157 Pfam PF02082 Transcriptional regulator 1 83 7.4E-31 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG60_10065 fe924e14a2d2c2a0b88c968cec805415 157 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 23-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CDG60_10065 fe924e14a2d2c2a0b88c968cec805415 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 6.5E-47 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG60_10065 fe924e14a2d2c2a0b88c968cec805415 157 Gene3D G3DSA:1.10.10.10 1 144 1.7E-53 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06775 450c9293854de63e075beb8b9fb1c6e8 188 Gene3D G3DSA:3.40.50.620 1 186 1.5E-52 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_06775 450c9293854de63e075beb8b9fb1c6e8 188 SUPERFAMILY SSF52374 9 170 9.7E-25 T 23-10-2018 CDG60_06775 450c9293854de63e075beb8b9fb1c6e8 188 Pfam PF01467 Cytidylyltransferase-like 9 61 3.6E-8 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG60_06775 450c9293854de63e075beb8b9fb1c6e8 188 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 67 1.4E-10 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG60_04205 314f5486c5b8e1d5731d4807d4186196 150 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 148 5.5E-25 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_04205 314f5486c5b8e1d5731d4807d4186196 150 Gene3D G3DSA:2.40.128.520 22 150 1.2E-16 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 7.1E-52 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 7.1E-52 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 7.1E-52 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 7.1E-52 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 7.1E-52 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 7.1E-52 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 7.1E-52 T 23-10-2018 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.6E-20 T 23-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 Pfam PF00361 Proton-conducting membrane transporter 134 417 2.5E-86 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 621 1.1E-205 T 23-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 6.4E-10 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 422 444 6.4E-10 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 6.4E-10 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG60_13830 3aea3e36f3fbe3226b0f8c20d0889f05 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 6.4E-10 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG60_05260 a5d8c44cf3d3beebf85c9817b6ed2499 683 PIRSF PIRSF015380 1 681 5.9E-168 T 23-10-2018 IPR011385 Putative site-specific recombinase Gcr CDG60_05260 a5d8c44cf3d3beebf85c9817b6ed2499 683 Pfam PF10136 Site-specific recombinase 26 665 5.8E-224 T 23-10-2018 IPR011385 Putative site-specific recombinase Gcr CDG60_04670 7298f27b351f40d13553769ab42759e0 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 120 28.842 T 23-10-2018 IPR026592 Outer membrane protein assembly factor BamE CDG60_04670 7298f27b351f40d13553769ab42759e0 132 Pfam PF04355 SmpA / OmlA family 30 106 2.9E-23 T 23-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CDG60_04670 7298f27b351f40d13553769ab42759e0 132 Gene3D G3DSA:3.30.1450.10 29 117 3.8E-23 T 23-10-2018 IPR037873 BamE-like CDG60_14515 30342df0fcdcc466c1f8166c1fce2570 335 SMART SM00507 220 272 5.9E-4 T 23-10-2018 IPR003615 HNH nuclease CDG60_14515 30342df0fcdcc466c1f8166c1fce2570 335 Gene3D G3DSA:3.30.40.60 181 325 4.8E-11 T 23-10-2018 CDG60_14515 30342df0fcdcc466c1f8166c1fce2570 335 Pfam PF13395 HNH endonuclease 232 278 2.2E-8 T 23-10-2018 IPR003615 HNH nuclease CDG60_02405 e0998f6c2d565244406f2b559f095fd3 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG60_02405 e0998f6c2d565244406f2b559f095fd3 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 85 8.5E-18 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG60_02405 e0998f6c2d565244406f2b559f095fd3 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 193 8.6E-53 T 23-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDG60_02405 e0998f6c2d565244406f2b559f095fd3 195 PIRSF PIRSF000847 4 195 2.6E-47 T 23-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDG60_02405 e0998f6c2d565244406f2b559f095fd3 195 Gene3D G3DSA:1.20.120.1760 6 188 1.3E-13 T 23-10-2018 CDG60_04245 fd55680cacaddeea7b8fb208365f878d 336 SUPERFAMILY SSF56300 116 335 3.66E-30 T 23-10-2018 CDG60_04245 fd55680cacaddeea7b8fb208365f878d 336 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 116 276 8.5E-11 T 23-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CDG60_04245 fd55680cacaddeea7b8fb208365f878d 336 Gene3D G3DSA:3.60.21.10 114 317 1.5E-19 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG60_10240 32aaf2d6bc0d1d21a16be042aca0637e 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.0E-93 T 23-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CDG60_10240 32aaf2d6bc0d1d21a16be042aca0637e 242 Gene3D G3DSA:3.40.1160.10 2 242 8.7E-67 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_10240 32aaf2d6bc0d1d21a16be042aca0637e 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 241 41.526 T 23-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CDG60_10240 32aaf2d6bc0d1d21a16be042aca0637e 242 Pfam PF00696 Amino acid kinase family 11 220 4.0E-23 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG60_10240 32aaf2d6bc0d1d21a16be042aca0637e 242 SUPERFAMILY SSF53633 7 241 1.44E-62 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG60_10240 32aaf2d6bc0d1d21a16be042aca0637e 242 PIRSF PIRSF005650 4 242 4.0E-85 T 23-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CDG60_08165 edeb2f4fbb53d46d34e21e418db40d9b 161 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 1.8E-66 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG60_08165 edeb2f4fbb53d46d34e21e418db40d9b 161 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.093 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG60_08165 edeb2f4fbb53d46d34e21e418db40d9b 161 Gene3D G3DSA:3.30.1330.50 2 161 1.2E-66 T 23-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG60_08165 edeb2f4fbb53d46d34e21e418db40d9b 161 Pfam PF02542 YgbB family 5 158 6.8E-66 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG60_08165 edeb2f4fbb53d46d34e21e418db40d9b 161 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 23-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG60_08165 edeb2f4fbb53d46d34e21e418db40d9b 161 SUPERFAMILY SSF69765 4 159 1.1E-64 T 23-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG60_16010 0cdbc854aeb30f0b6e75111b332432b7 515 Gene3D G3DSA:3.40.50.300 4 96 1.6E-10 T 23-10-2018 CDG60_16010 0cdbc854aeb30f0b6e75111b332432b7 515 SMART SM00382 25 329 0.0079 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_16010 0cdbc854aeb30f0b6e75111b332432b7 515 Pfam PF05872 Bacterial protein of unknown function (DUF853) 12 512 6.3E-227 T 23-10-2018 IPR033186 Helicase HerA-like C-terminal CDG60_16010 0cdbc854aeb30f0b6e75111b332432b7 515 Gene3D G3DSA:3.40.50.300 203 379 1.9E-20 T 23-10-2018 CDG60_16010 0cdbc854aeb30f0b6e75111b332432b7 515 SUPERFAMILY SSF52540 16 372 1.48E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_17100 48e4eb4bfca5e4516a99d89994294b81 206 Gene3D G3DSA:1.10.357.10 12 204 1.3E-45 T 23-10-2018 CDG60_17100 48e4eb4bfca5e4516a99d89994294b81 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.0E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_17100 48e4eb4bfca5e4516a99d89994294b81 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.0E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_17100 48e4eb4bfca5e4516a99d89994294b81 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.7E-12 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_17100 48e4eb4bfca5e4516a99d89994294b81 206 SUPERFAMILY SSF46689 12 92 3.18E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_17100 48e4eb4bfca5e4516a99d89994294b81 206 SUPERFAMILY SSF48498 90 202 1.33E-24 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_09080 dac3adf1657798a5f5f0ad55b6c37b1b 445 Gene3D G3DSA:1.10.443.10 189 383 9.3E-18 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG60_09080 dac3adf1657798a5f5f0ad55b6c37b1b 445 Pfam PF00589 Phage integrase family 218 372 9.4E-8 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG60_09080 dac3adf1657798a5f5f0ad55b6c37b1b 445 SUPERFAMILY SSF56349 216 375 1.88E-16 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 SUPERFAMILY SSF55424 348 471 4.3E-39 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 SUPERFAMILY SSF51905 1 343 1.94E-62 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 470 4.5E-158 T 23-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 Gene3D G3DSA:3.50.50.60 162 283 9.0E-112 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 Gene3D G3DSA:3.50.50.60 4 340 9.0E-112 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 333 1.3E-67 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 1.1E-35 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 23-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PIRSF PIRSF000350 1 468 8.3E-85 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 Gene3D G3DSA:3.30.390.30 352 477 2.0E-43 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.2E-70 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.5E-34 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 2.5E-34 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 2.5E-34 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 2.5E-34 T 23-10-2018 CDG60_05610 ebaf91fa850ce32eff90532033f9291c 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.5E-34 T 23-10-2018 CDG60_14810 fcf38411f49f778e799da7dba3159d80 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 1.5E-174 T 23-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_14810 fcf38411f49f778e799da7dba3159d80 421 Gene3D G3DSA:3.65.10.10 21 229 8.5E-174 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG60_14810 fcf38411f49f778e799da7dba3159d80 421 Gene3D G3DSA:3.65.10.10 6 414 8.5E-174 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG60_14810 fcf38411f49f778e799da7dba3159d80 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.2E-109 T 23-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CDG60_14810 fcf38411f49f778e799da7dba3159d80 421 SUPERFAMILY SSF55205 1 418 2.35E-143 T 23-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CDG60_14810 fcf38411f49f778e799da7dba3159d80 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.127 T 23-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG60_02070 8a0a591b529cc05865ac20dcaea194c6 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 385 9.7E-120 T 23-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_02070 8a0a591b529cc05865ac20dcaea194c6 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 28 396 37.294 T 23-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_02070 8a0a591b529cc05865ac20dcaea194c6 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 344 368 - T 23-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_02070 8a0a591b529cc05865ac20dcaea194c6 398 Pfam PF01098 Cell cycle protein 33 387 9.5E-98 T 23-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG60_10470 08182f6b7566407832f2d3a2830c9eb1 394 Pfam PF07690 Major Facilitator Superfamily 15 330 9.4E-34 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_10470 08182f6b7566407832f2d3a2830c9eb1 394 SUPERFAMILY SSF103473 13 392 2.09E-48 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_10470 08182f6b7566407832f2d3a2830c9eb1 394 Gene3D G3DSA:1.20.1250.20 199 394 5.5E-14 T 23-10-2018 CDG60_10470 08182f6b7566407832f2d3a2830c9eb1 394 Gene3D G3DSA:1.20.1250.20 13 195 1.6E-24 T 23-10-2018 CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 Gene3D G3DSA:2.160.10.10 104 313 7.0E-68 T 23-10-2018 CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 Gene3D G3DSA:3.40.1390.10 2 103 1.9E-28 T 23-10-2018 CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 329 8.5E-102 T 23-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 226 261 1.2E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 146 2.2E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 150 184 5.5E-6 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 93 2.1E-17 T 23-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 330 33.578 T 23-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CDG60_10200 f6e9501c2a48707e2b0d461da0e94e18 357 SUPERFAMILY SSF51161 35 319 3.07E-72 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_00215 28a478d9d66b82ab78417ec30a489832 245 Gene3D G3DSA:2.60.40.2500 140 241 4.8E-19 T 23-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily CDG60_00215 28a478d9d66b82ab78417ec30a489832 245 Pfam PF03524 Conjugal transfer protein 33 237 5.4E-47 T 23-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CDG60_13495 f287bc4737e48091c19308e46fc3b994 314 Pfam PF01734 Patatin-like phospholipase 47 204 1.3E-25 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDG60_13495 f287bc4737e48091c19308e46fc3b994 314 Gene3D G3DSA:3.40.1090.10 27 143 6.6E-29 T 23-10-2018 CDG60_13495 f287bc4737e48091c19308e46fc3b994 314 SUPERFAMILY SSF52151 30 291 2.96E-52 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG60_03430 cac567ae7c02e812e421bfaa0bd6534b 395 Gene3D G3DSA:1.20.1250.20 208 391 2.0E-11 T 23-10-2018 CDG60_03430 cac567ae7c02e812e421bfaa0bd6534b 395 SUPERFAMILY SSF103473 9 388 2.75E-29 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_03430 cac567ae7c02e812e421bfaa0bd6534b 395 Pfam PF07690 Major Facilitator Superfamily 12 348 2.7E-16 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_03430 cac567ae7c02e812e421bfaa0bd6534b 395 Gene3D G3DSA:1.20.1250.20 4 194 6.4E-8 T 23-10-2018 CDG60_18085 0279784125ef02dcf1b4093fb99b0b36 118 SUPERFAMILY SSF101756 30 116 1.7E-21 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG60_18085 0279784125ef02dcf1b4093fb99b0b36 118 Gene3D G3DSA:2.40.50.200 13 118 1.0E-22 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG60_18085 0279784125ef02dcf1b4093fb99b0b36 118 Pfam PF04076 Bacterial OB fold (BOF) protein 31 115 2.1E-19 T 23-10-2018 IPR005220 Bacterial OB-fold CDG60_17040 4aa07616e640b37fd9952cef9a6a28dc 626 Pfam PF02705 K+ potassium transporter 15 547 6.5E-199 T 23-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CDG60_17040 4aa07616e640b37fd9952cef9a6a28dc 626 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 626 33.137 T 23-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup CDG60_00905 b1603a61a57ecfd0dd4517fb25a64dc0 178 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG60_00905 b1603a61a57ecfd0dd4517fb25a64dc0 178 TIGRFAM TIGR00077 lspA: signal peptidase II 18 172 3.5E-39 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG60_00905 b1603a61a57ecfd0dd4517fb25a64dc0 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 2.7E-19 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG60_00905 b1603a61a57ecfd0dd4517fb25a64dc0 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 2.7E-19 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG60_00905 b1603a61a57ecfd0dd4517fb25a64dc0 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 61 69 2.7E-19 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG60_00905 b1603a61a57ecfd0dd4517fb25a64dc0 178 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 170 17.226 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG60_00905 b1603a61a57ecfd0dd4517fb25a64dc0 178 Pfam PF01252 Signal peptidase (SPase) II 24 165 3.1E-36 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG60_08355 aa37e94a8292e7860cf4d9968ae798e9 106 Gene3D G3DSA:2.102.10.10 1 106 3.4E-18 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_08355 aa37e94a8292e7860cf4d9968ae798e9 106 Pfam PF00355 Rieske [2Fe-2S] domain 4 87 6.3E-13 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG60_08355 aa37e94a8292e7860cf4d9968ae798e9 106 SUPERFAMILY SSF50022 3 105 1.28E-24 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG60_15300 abf2fd9c2b0a76f13471cc14fae655ae 206 SUPERFAMILY SSF51197 14 201 1.37E-59 T 23-10-2018 CDG60_15300 abf2fd9c2b0a76f13471cc14fae655ae 206 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 199 8.5E-31 T 23-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CDG60_15300 abf2fd9c2b0a76f13471cc14fae655ae 206 Gene3D G3DSA:2.60.120.590 11 204 2.1E-59 T 23-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CDG60_15175 40b3584c5963b3beab89c9f514693a74 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 65 4.4E-32 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDG60_15175 40b3584c5963b3beab89c9f514693a74 66 Gene3D G3DSA:1.10.10.600 1 66 1.9E-28 T 23-10-2018 IPR036762 IscX-like superfamily CDG60_15175 40b3584c5963b3beab89c9f514693a74 66 PIRSF PIRSF039003 3 66 4.1E-35 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDG60_15175 40b3584c5963b3beab89c9f514693a74 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 3.1E-32 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDG60_15175 40b3584c5963b3beab89c9f514693a74 66 SUPERFAMILY SSF140319 3 64 8.24E-27 T 23-10-2018 IPR036762 IscX-like superfamily CDG60_03010 b56eb01377326e3eb1fc3f20652598f5 320 SUPERFAMILY SSF53213 4 317 3.01E-64 T 23-10-2018 CDG60_03010 b56eb01377326e3eb1fc3f20652598f5 320 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 5 313 2.9E-49 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CDG60_03010 b56eb01377326e3eb1fc3f20652598f5 320 Gene3D G3DSA:3.40.830.10 225 320 2.3E-15 T 23-10-2018 CDG60_03010 b56eb01377326e3eb1fc3f20652598f5 320 Gene3D G3DSA:3.40.830.10 2 207 4.0E-49 T 23-10-2018 CDG60_07240 4a97396808f1e5aae8dc148b59b9c966 331 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 1.8E-92 T 23-10-2018 IPR016833 Putative sodium bile acid cotransporter CDG60_07240 4a97396808f1e5aae8dc148b59b9c966 331 Gene3D G3DSA:1.20.1530.20 8 328 4.2E-33 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_07240 4a97396808f1e5aae8dc148b59b9c966 331 PIRSF PIRSF026166 1 330 4.6E-126 T 23-10-2018 IPR016833 Putative sodium bile acid cotransporter CDG60_03440 6760fded10bae527f41fb07cacc7900c 314 Pfam PF01148 Cytidylyltransferase family 47 311 7.0E-66 T 23-10-2018 CDG60_17930 2e5f2116b1bcbee3d2bd0b34126ab54e 356 Gene3D G3DSA:3.40.50.1820 44 351 4.4E-75 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_17930 2e5f2116b1bcbee3d2bd0b34126ab54e 356 SUPERFAMILY SSF53474 79 340 4.12E-61 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_17930 2e5f2116b1bcbee3d2bd0b34126ab54e 356 Pfam PF07859 alpha/beta hydrolase fold 123 328 1.7E-64 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG60_01795 a86e9d63acbc84cd14b9d49987ce2b81 121 Pfam PF01042 Endoribonuclease L-PSP 4 115 4.0E-23 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG60_01795 a86e9d63acbc84cd14b9d49987ce2b81 121 SUPERFAMILY SSF55298 10 118 2.98E-27 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_01795 a86e9d63acbc84cd14b9d49987ce2b81 121 Gene3D G3DSA:3.30.1330.40 1 121 7.3E-33 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_07475 b880ec2415e76b79942b2667705cd32a 211 SUPERFAMILY SSF47240 44 126 2.51E-16 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_07475 b880ec2415e76b79942b2667705cd32a 211 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 50 209 2.1E-41 T 23-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CDG60_07475 b880ec2415e76b79942b2667705cd32a 211 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 211 29.13 T 23-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CDG60_00220 5614025a46564aebfaea912f5c08c4dc 262 Gene3D G3DSA:3.10.450.230 109 235 4.9E-12 T 23-10-2018 CDG60_00220 5614025a46564aebfaea912f5c08c4dc 262 SUPERFAMILY SSF54427 114 228 9.2E-14 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_00220 5614025a46564aebfaea912f5c08c4dc 262 Pfam PF04335 VirB8 protein 17 227 3.2E-19 T 23-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 CDG60_14930 8fbdb74147fc9692ef678657e49c2056 189 Pfam PF02325 YGGT family 108 177 4.7E-16 T 23-10-2018 IPR003425 CCB3/YggT GO:0016020 CDG60_14930 8fbdb74147fc9692ef678657e49c2056 189 Pfam PF02325 YGGT family 11 79 1.0E-5 T 23-10-2018 IPR003425 CCB3/YggT GO:0016020 CDG60_04285 49b4a29be1fd7bc1c3e9ce9006b86f92 208 Pfam PF01810 LysE type translocator 17 204 3.9E-18 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_05875 37b38e7cdf979986896d820e3a0c98df 1179 SUPERFAMILY SSF101967 932 1071 3.4E-32 T 23-10-2018 CDG60_05875 37b38e7cdf979986896d820e3a0c98df 1179 Gene3D G3DSA:2.150.10.10 907 1078 7.3E-37 T 23-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CDG60_05875 37b38e7cdf979986896d820e3a0c98df 1179 Gene3D G3DSA:3.30.1300.30 1079 1176 7.6E-15 T 23-10-2018 CDG60_05875 37b38e7cdf979986896d820e3a0c98df 1179 SUPERFAMILY SSF54523 1061 1176 8.95E-16 T 23-10-2018 CDG60_05875 37b38e7cdf979986896d820e3a0c98df 1179 Pfam PF03895 YadA-like membrane anchor domain 1121 1176 5.7E-10 T 23-10-2018 IPR005594 YadA-like, C-terminal CDG60_12000 b2afb251a8d0f6e137e9b3cb94aa61cd 233 Gene3D G3DSA:3.30.2310.10 138 227 2.5E-12 T 23-10-2018 CDG60_12000 b2afb251a8d0f6e137e9b3cb94aa61cd 233 SUPERFAMILY SSF118196 2 227 7.85E-69 T 23-10-2018 IPR036413 YaeB-like superfamily CDG60_12000 b2afb251a8d0f6e137e9b3cb94aa61cd 233 Gene3D G3DSA:2.40.30.70 1 137 8.3E-45 T 23-10-2018 IPR036414 YaeB, N-terminal domain superfamily CDG60_12000 b2afb251a8d0f6e137e9b3cb94aa61cd 233 Pfam PF01980 Uncharacterised protein family UPF0066 15 140 1.6E-40 T 23-10-2018 IPR023370 YaeB-like, N-terminal domain CDG60_12000 b2afb251a8d0f6e137e9b3cb94aa61cd 233 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 145 3.4E-40 T 23-10-2018 IPR023370 YaeB-like, N-terminal domain CDG60_04835 c82483e7dd8748da8cd30c638c86a6d8 228 SUPERFAMILY SSF82185 125 206 1.96E-5 T 23-10-2018 CDG60_04835 c82483e7dd8748da8cd30c638c86a6d8 228 Gene3D G3DSA:3.90.930.1 118 219 2.7E-10 T 23-10-2018 CDG60_07355 5dac38164d6f6bef9b5096802f56eaa0 155 Pfam PF05360 yiaA/B two helix domain 75 127 3.3E-21 T 23-10-2018 IPR008024 YiaAB two helix CDG60_07355 5dac38164d6f6bef9b5096802f56eaa0 155 Pfam PF05360 yiaA/B two helix domain 12 64 3.8E-21 T 23-10-2018 IPR008024 YiaAB two helix CDG60_16675 6a6ea45965f4cd0802305872e4aa33de 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 4.6E-18 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_16675 6a6ea45965f4cd0802305872e4aa33de 68 SUPERFAMILY SSF47413 9 67 1.87E-9 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_16675 6a6ea45965f4cd0802305872e4aa33de 68 Gene3D G3DSA:1.10.260.40 1 67 6.3E-9 T 23-10-2018 CDG60_03980 c24ece744377e004c5dedfddbaa282d1 149 Gene3D G3DSA:3.40.630.30 1 136 4.7E-25 T 23-10-2018 CDG60_03980 c24ece744377e004c5dedfddbaa282d1 149 SUPERFAMILY SSF55729 1 136 3.11E-25 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_03980 c24ece744377e004c5dedfddbaa282d1 149 Pfam PF13673 Acetyltransferase (GNAT) domain 45 148 3.5E-18 T 23-10-2018 IPR000182 GNAT domain CDG60_06030 7f949815d13fda8155bbfc4897cc74f9 294 Pfam PF07859 alpha/beta hydrolase fold 75 155 6.5E-17 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG60_06030 7f949815d13fda8155bbfc4897cc74f9 294 SUPERFAMILY SSF53474 34 266 4.22E-41 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_06030 7f949815d13fda8155bbfc4897cc74f9 294 Gene3D G3DSA:3.40.50.1820 7 274 3.4E-48 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04710 0512a9eb20419f5dac3c7c3bf306711f 1198 Pfam PF13476 AAA domain 5 312 3.7E-14 T 23-10-2018 IPR038729 Rad50/SbcC-type AAA domain CDG60_04710 0512a9eb20419f5dac3c7c3bf306711f 1198 SUPERFAMILY SSF52540 7 1176 1.54E-24 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04710 0512a9eb20419f5dac3c7c3bf306711f 1198 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1086 1156 8.9E-11 T 23-10-2018 CDG60_04710 0512a9eb20419f5dac3c7c3bf306711f 1198 Gene3D G3DSA:3.40.50.300 910 1198 3.3E-24 T 23-10-2018 CDG60_04710 0512a9eb20419f5dac3c7c3bf306711f 1198 Gene3D G3DSA:3.40.50.300 1 281 4.4E-40 T 23-10-2018 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 Gene3D G3DSA:1.10.3860.10 1 434 1.3E-123 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 310 333 - T 23-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 443 37.567 T 23-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 51 66 - T 23-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 Pfam PF00375 Sodium:dicarboxylate symporter family 10 416 2.3E-111 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 SUPERFAMILY SSF118215 10 416 2.62E-119 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 9.0E-26 T 23-10-2018 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 9.0E-26 T 23-10-2018 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 9.0E-26 T 23-10-2018 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 9.0E-26 T 23-10-2018 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 9.0E-26 T 23-10-2018 CDG60_11925 7f31826e6b17c36efaa742fddd59f8ca 448 PRINTS PR00173 Glutamate-aspartate symporter signature 160 182 9.0E-26 T 23-10-2018 CDG60_01885 5df9d8a39fdc15e146ba2d33a6a498e1 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG60_01885 5df9d8a39fdc15e146ba2d33a6a498e1 556 SUPERFAMILY SSF56801 20 556 1.83E-149 T 23-10-2018 CDG60_01885 5df9d8a39fdc15e146ba2d33a6a498e1 556 Pfam PF00501 AMP-binding enzyme 31 465 1.3E-108 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG60_01885 5df9d8a39fdc15e146ba2d33a6a498e1 556 Gene3D G3DSA:3.30.300.310 461 556 4.0E-33 T 23-10-2018 CDG60_01885 5df9d8a39fdc15e146ba2d33a6a498e1 556 Gene3D G3DSA:3.40.50.12780 18 458 1.2E-112 T 23-10-2018 CDG60_01885 5df9d8a39fdc15e146ba2d33a6a498e1 556 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 1.9E-19 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG60_04405 e2082c4409adc4ef575ed7631728a9b2 278 Gene3D G3DSA:3.40.50.1820 1 278 1.6E-87 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04405 e2082c4409adc4ef575ed7631728a9b2 278 SUPERFAMILY SSF53474 1 273 2.37E-81 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_04405 e2082c4409adc4ef575ed7631728a9b2 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 1.1E-119 T 23-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CDG60_04405 e2082c4409adc4ef575ed7631728a9b2 278 Pfam PF00756 Putative esterase 21 270 5.7E-54 T 23-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CDG60_17785 5ecc2d135d2566ebf10e2ee355c99e27 732 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 2 732 5.9E-279 T 23-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CDG60_17785 5ecc2d135d2566ebf10e2ee355c99e27 732 Gene3D G3DSA:3.40.720.10 34 207 1.9E-29 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_17785 5ecc2d135d2566ebf10e2ee355c99e27 732 Pfam PF04185 Phosphoesterase family 45 470 5.2E-111 T 23-10-2018 IPR007312 Phosphoesterase GO:0016788 CDG60_17785 5ecc2d135d2566ebf10e2ee355c99e27 732 Pfam PF05506 Domain of unknown function (DUF756) 638 719 7.3E-16 T 23-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CDG60_17785 5ecc2d135d2566ebf10e2ee355c99e27 732 Pfam PF05506 Domain of unknown function (DUF756) 542 627 5.2E-22 T 23-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 CDG60_05730 cbf60b3f685c54075f4def4e0be63b1f 293 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 272 1.3E-44 T 23-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 CDG60_05730 cbf60b3f685c54075f4def4e0be63b1f 293 SUPERFAMILY SSF53335 7 289 2.77E-48 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_05730 cbf60b3f685c54075f4def4e0be63b1f 293 Pfam PF04072 Leucine carboxyl methyltransferase 11 196 1.8E-40 T 23-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 CDG60_05730 cbf60b3f685c54075f4def4e0be63b1f 293 Gene3D G3DSA:3.40.50.150 2 288 1.4E-46 T 23-10-2018 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 SUPERFAMILY SSF46458 1 143 3.36E-34 T 23-10-2018 IPR009050 Globin-like superfamily CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 Gene3D G3DSA:3.40.50.80 261 399 8.0E-32 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 Pfam PF00175 Oxidoreductase NAD-binding domain 269 376 1.0E-15 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 268 287 6.6E-10 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 363 371 6.6E-10 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 184 196 6.6E-10 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 Gene3D G3DSA:2.40.30.10 150 259 4.0E-34 T 23-10-2018 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 SUPERFAMILY SSF63380 150 260 2.79E-26 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 SUPERFAMILY SSF52343 259 398 1.83E-33 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 Pfam PF00042 Globin 5 101 2.8E-7 T 23-10-2018 IPR000971 Globin GO:0020037 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 Gene3D G3DSA:1.10.490.10 1 143 1.9E-47 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CDG60_16040 4aa9801664320099b7a2e78f73597cf2 402 Pfam PF00970 Oxidoreductase FAD-binding domain 157 259 5.3E-7 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 PIRSF PIRSF000513 24 286 8.3E-71 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 Gene3D G3DSA:3.40.1190.20 7 286 3.1E-77 T 23-10-2018 IPR029056 Ribokinase-like CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 SUPERFAMILY SSF53613 28 284 6.69E-50 T 23-10-2018 IPR029056 Ribokinase-like CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 Pfam PF02110 Hydroxyethylthiazole kinase family 32 273 4.6E-63 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 139 153 2.6E-21 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 51 72 2.6E-21 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 38 45 2.6E-21 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 108 125 2.6E-21 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 82 90 2.6E-21 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 182 199 2.6E-21 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_07620 582243d0cc3b4fbce913ee1d0eb31adf 287 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 32 278 26.741 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG60_13365 079585e803f0d7781738d69ae198f30c 296 Gene3D G3DSA:3.40.50.1820 8 291 5.1E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_13365 079585e803f0d7781738d69ae198f30c 296 PIRSF PIRSF037442 8 293 9.4E-84 T 23-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 CDG60_13365 079585e803f0d7781738d69ae198f30c 296 Pfam PF12146 Serine aminopeptidase, S33 53 163 1.7E-8 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG60_13365 079585e803f0d7781738d69ae198f30c 296 SUPERFAMILY SSF53474 8 292 5.49E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_07980 1524d4758b1ab104a2ca423f3f5001a8 106 Pfam PF06865 Protein of unknown function (DUF1255) 13 103 6.6E-22 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDG60_07980 1524d4758b1ab104a2ca423f3f5001a8 106 SUPERFAMILY SSF51182 12 103 3.16E-21 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_07980 1524d4758b1ab104a2ca423f3f5001a8 106 Gene3D G3DSA:2.60.120.10 1 106 3.1E-32 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_15535 46b642eb6a2454519a256360ea025675 191 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 42.317 T 23-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CDG60_15535 46b642eb6a2454519a256360ea025675 191 Pfam PF00156 Phosphoribosyl transferase domain 44 157 7.8E-7 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG60_15535 46b642eb6a2454519a256360ea025675 191 SUPERFAMILY SSF53271 4 188 3.65E-45 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_15535 46b642eb6a2454519a256360ea025675 191 Gene3D G3DSA:3.40.50.2020 3 188 2.5E-53 T 23-10-2018 CDG60_15535 46b642eb6a2454519a256360ea025675 191 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 191 3.5E-86 T 23-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CDG60_17495 6dd1ad66009cb18e1ac8a94e68c9a95a 198 Gene3D G3DSA:3.40.50.1820 1 197 8.9E-49 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_17495 6dd1ad66009cb18e1ac8a94e68c9a95a 198 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 189 7.8E-39 T 23-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDG60_17495 6dd1ad66009cb18e1ac8a94e68c9a95a 198 SUPERFAMILY SSF53474 3 194 4.69E-18 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_12460 5a34ed5c1cfd94b386d71881bef380a8 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 99 9.0E-19 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CDG60_10280 261bbf1946688d230607da6bf2cfe881 121 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 87 3.6E-15 T 23-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CDG60_14190 cffb70c134e92a5ba15eb48930921424 488 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 30 420 2.8E-8 T 23-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 CDG60_14190 cffb70c134e92a5ba15eb48930921424 488 Gene3D G3DSA:1.10.4160.10 18 482 1.2E-25 T 23-10-2018 IPR038271 Purine-cytosine permease superfamily CDG60_02430 9e8e914753710d77238299b759d340d2 693 Pfam PF04632 Fusaric acid resistance protein family 16 679 1.3E-143 T 23-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 CDG60_02090 a96007987c6ffbd5a45d64d6f2a0c76c 269 SUPERFAMILY SSF56300 14 257 3.24E-56 T 23-10-2018 CDG60_02090 a96007987c6ffbd5a45d64d6f2a0c76c 269 Gene3D G3DSA:3.60.21.10 2 263 3.7E-63 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG60_02090 a96007987c6ffbd5a45d64d6f2a0c76c 269 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 207 255 2.0E-11 T 23-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CDG60_02090 a96007987c6ffbd5a45d64d6f2a0c76c 269 Pfam PF00149 Calcineurin-like phosphoesterase 14 201 1.5E-15 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG60_02090 a96007987c6ffbd5a45d64d6f2a0c76c 269 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 255 32.649 T 23-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 SUPERFAMILY SSF46894 131 225 6.52E-24 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 SMART SM00448 2 112 6.9E-40 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 SUPERFAMILY SSF52172 1 126 7.26E-41 T 23-10-2018 IPR011006 CheY-like superfamily CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-36 T 23-10-2018 CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 223 1.1E-23 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 SMART SM00862 144 223 4.8E-24 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG60_03925 2b1b361ba27f220c817209c495467b4c 228 Gene3D G3DSA:1.10.10.10 130 225 1.0E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04560 624f856bd1bb36486d0ed797a02b23b9 152 Pfam PF00583 Acetyltransferase (GNAT) family 24 116 3.3E-14 T 23-10-2018 IPR000182 GNAT domain CDG60_04560 624f856bd1bb36486d0ed797a02b23b9 152 Gene3D G3DSA:3.40.630.30 1 148 4.3E-38 T 23-10-2018 CDG60_04560 624f856bd1bb36486d0ed797a02b23b9 152 SUPERFAMILY SSF55729 1 142 3.71E-29 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_04560 624f856bd1bb36486d0ed797a02b23b9 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 9 139 2.5E-36 T 23-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CDG60_01810 cb151a606edd0563f33e643afe20886a 260 Gene3D G3DSA:3.20.20.80 33 246 3.6E-70 T 23-10-2018 CDG60_01810 cb151a606edd0563f33e643afe20886a 260 Pfam PF01183 Glycosyl hydrolases family 25 50 223 1.0E-44 T 23-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CDG60_01810 cb151a606edd0563f33e643afe20886a 260 SMART SM00641 46 152 1.4E-8 T 23-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup CDG60_01810 cb151a606edd0563f33e643afe20886a 260 SUPERFAMILY SSF51445 43 243 6.11E-60 T 23-10-2018 IPR017853 Glycoside hydrolase superfamily CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 SUPERFAMILY SSF51905 277 467 1.94E-12 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 3.2E-6 T 23-10-2018 CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-6 T 23-10-2018 CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.6E-5 T 23-10-2018 CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 6.6E-5 T 23-10-2018 CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 SUPERFAMILY SSF51905 7 470 2.96E-56 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 Gene3D G3DSA:3.50.50.60 1 167 1.2E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 Gene3D G3DSA:3.50.50.60 303 483 1.8E-26 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_01620 539a1280aafc055a8eb9fd64401ab18a 495 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 10 212 9.0E-19 T 23-10-2018 CDG60_02750 fd53723f3daa8a63eef3a43052c712fc 144 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 106 2.2E-13 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDG60_02750 fd53723f3daa8a63eef3a43052c712fc 144 Gene3D G3DSA:2.170.150.70 2 115 1.0E-13 T 23-10-2018 CDG60_02750 fd53723f3daa8a63eef3a43052c712fc 144 SUPERFAMILY SSF51316 1 117 4.92E-27 T 23-10-2018 IPR011057 Mss4-like superfamily CDG60_01245 0fc5a7b35cf31b59fcf548357e87ded9 143 Pfam PF01475 Ferric uptake regulator family 3 119 1.4E-9 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDG60_01245 0fc5a7b35cf31b59fcf548357e87ded9 143 Gene3D G3DSA:1.10.10.10 1 69 3.0E-13 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_01245 0fc5a7b35cf31b59fcf548357e87ded9 143 SUPERFAMILY SSF46785 3 124 1.47E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01245 0fc5a7b35cf31b59fcf548357e87ded9 143 Gene3D G3DSA:3.30.1490.190 72 130 2.9E-9 T 23-10-2018 CDG60_10310 28cddcd573d443e709e5bf4b7a8b54b5 374 Gene3D G3DSA:3.90.226.10 13 353 1.4E-87 T 23-10-2018 CDG60_10310 28cddcd573d443e709e5bf4b7a8b54b5 374 Pfam PF16113 Enoyl-CoA hydratase/isomerase 24 341 6.5E-84 T 23-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 CDG60_10310 28cddcd573d443e709e5bf4b7a8b54b5 374 SUPERFAMILY SSF52096 12 345 1.3E-51 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_15325 60151fe370573c6df7a83393faed74ad 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 282 3.8E-62 T 23-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CDG60_01865 2e0428b9049a559f8438a0a324adb9e0 439 Gene3D G3DSA:1.20.1250.20 12 439 8.1E-97 T 23-10-2018 CDG60_01865 2e0428b9049a559f8438a0a324adb9e0 439 Pfam PF00083 Sugar (and other) transporter 54 437 3.9E-51 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG60_01865 2e0428b9049a559f8438a0a324adb9e0 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_01865 2e0428b9049a559f8438a0a324adb9e0 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_01865 2e0428b9049a559f8438a0a324adb9e0 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 320 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_01865 2e0428b9049a559f8438a0a324adb9e0 439 SUPERFAMILY SSF103473 8 437 3.53E-93 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_16310 70b91305c8362f1bcd0634b531eb2ad7 184 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 46 183 2.1E-32 T 23-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG60_16310 70b91305c8362f1bcd0634b531eb2ad7 184 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 172 183 - T 23-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG60_16310 70b91305c8362f1bcd0634b531eb2ad7 184 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 78 88 - T 23-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG60_16310 70b91305c8362f1bcd0634b531eb2ad7 184 Gene3D G3DSA:2.60.40.200 33 184 2.7E-49 T 23-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG60_16310 70b91305c8362f1bcd0634b531eb2ad7 184 SUPERFAMILY SSF49329 38 183 1.7E-43 T 23-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG60_18055 c02b522663fe1e68c5722e038c096fe8 180 Gene3D G3DSA:3.40.630.30 1 157 6.5E-42 T 23-10-2018 CDG60_18055 c02b522663fe1e68c5722e038c096fe8 180 SUPERFAMILY SSF55729 1 170 1.49E-39 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_18055 c02b522663fe1e68c5722e038c096fe8 180 Pfam PF13302 Acetyltransferase (GNAT) domain 6 147 4.1E-30 T 23-10-2018 IPR000182 GNAT domain CDG60_01240 667b4dc742002291afd77d6c9932e768 248 Pfam PF08291 Peptidase M15 110 172 6.9E-7 T 23-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 CDG60_01240 667b4dc742002291afd77d6c9932e768 248 Gene3D G3DSA:3.30.1380.10 88 222 6.8E-6 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_01240 667b4dc742002291afd77d6c9932e768 248 SUPERFAMILY SSF55166 99 224 2.98E-14 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG60_09280 4b90b7b75eda1972803eb429e2243a05 224 Pfam PF06912 Protein of unknown function (DUF1275) 14 209 2.7E-28 T 23-10-2018 IPR010699 Protein of unknown function DUF1275 CDG60_15580 abbc127ea5d7eca8b182ba9cbc83f78a 238 Pfam PF11008 Protein of unknown function (DUF2846) 55 162 9.8E-26 T 23-10-2018 IPR022548 Domain of unknown function DUF2846 CDG60_12655 dac4625a38ce57d31f48bf669fb49164 405 Gene3D G3DSA:3.40.190.170 112 373 1.0E-14 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG60_14500 582f411b7abe702df5af53fe689f8364 564 Pfam PF01555 DNA methylase 68 370 4.9E-49 T 23-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CDG60_14500 582f411b7abe702df5af53fe689f8364 564 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 71 77 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG60_14500 582f411b7abe702df5af53fe689f8364 564 PIRSF PIRSF015855 3 554 3.4E-122 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_14500 582f411b7abe702df5af53fe689f8364 564 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 315 337 4.6E-23 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_14500 582f411b7abe702df5af53fe689f8364 564 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 338 352 4.6E-23 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_14500 582f411b7abe702df5af53fe689f8364 564 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 68 80 4.6E-23 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_14500 582f411b7abe702df5af53fe689f8364 564 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 102 121 4.6E-23 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG60_14500 582f411b7abe702df5af53fe689f8364 564 SUPERFAMILY SSF53335 43 384 1.54E-75 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_09580 1c116665a83da044fd63d589e7ad708c 458 Gene3D G3DSA:3.50.50.60 220 326 6.9E-19 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_09580 1c116665a83da044fd63d589e7ad708c 458 Gene3D G3DSA:3.50.50.60 14 137 8.5E-21 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_09580 1c116665a83da044fd63d589e7ad708c 458 Pfam PF01593 Flavin containing amine oxidoreductase 23 340 4.3E-16 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CDG60_09580 1c116665a83da044fd63d589e7ad708c 458 SUPERFAMILY SSF51905 11 332 7.56E-39 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_04870 187542f384528c59fe9a4afc47517e8e 366 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 225 348 7.3E-28 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDG60_04870 187542f384528c59fe9a4afc47517e8e 366 Gene3D G3DSA:3.30.1400.10 220 356 5.4E-29 T 23-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CDG60_04870 187542f384528c59fe9a4afc47517e8e 366 SUPERFAMILY SSF64383 222 353 3.14E-26 T 23-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CDG60_04870 187542f384528c59fe9a4afc47517e8e 366 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 236 356 1.0E-45 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDG60_04870 187542f384528c59fe9a4afc47517e8e 366 SMART SM00771 221 349 1.2E-36 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDG60_13045 db636d0bc622b16c67312ba8b862d23f 156 Pfam PF11220 Protein of unknown function (DUF3015) 19 155 1.8E-40 T 23-10-2018 IPR021383 Protein of unknown function DUF3015 CDG60_09960 5ba32be6f727a2a42b4b4f63fa58c29a 395 Pfam PF05762 VWA domain containing CoxE-like protein 189 277 3.1E-8 T 23-10-2018 IPR008912 Uncharacterised protein family CoxE-like CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 Gene3D G3DSA:3.40.50.850 1 211 1.8E-74 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 PIRSF PIRSF001111 1 216 6.8E-103 T 23-10-2018 IPR016291 Isochorismatase GO:0008908 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 PRINTS PR01398 Isochorismatase signature 112 134 8.1E-44 T 23-10-2018 IPR016291 Isochorismatase GO:0008908 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 PRINTS PR01398 Isochorismatase signature 63 80 8.1E-44 T 23-10-2018 IPR016291 Isochorismatase GO:0008908 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 PRINTS PR01398 Isochorismatase signature 168 186 8.1E-44 T 23-10-2018 IPR016291 Isochorismatase GO:0008908 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 PRINTS PR01398 Isochorismatase signature 186 203 8.1E-44 T 23-10-2018 IPR016291 Isochorismatase GO:0008908 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 PRINTS PR01398 Isochorismatase signature 2 14 8.1E-44 T 23-10-2018 IPR016291 Isochorismatase GO:0008908 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 PRINTS PR01398 Isochorismatase signature 80 99 8.1E-44 T 23-10-2018 IPR016291 Isochorismatase GO:0008908 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 Pfam PF00857 Isochorismatase family 32 204 6.3E-37 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG60_13085 0439e13cefa3b7455d57b373ca156ddb 216 SUPERFAMILY SSF52499 1 208 1.11E-60 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG60_08075 74dcb304d25dc8296856b238ac463e79 301 Gene3D G3DSA:3.40.50.1820 2 299 3.6E-32 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_08075 74dcb304d25dc8296856b238ac463e79 301 Pfam PF00561 alpha/beta hydrolase fold 22 286 2.3E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_08075 74dcb304d25dc8296856b238ac463e79 301 SUPERFAMILY SSF53474 2 299 1.91E-32 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_03320 174f4aecd6a65137d5d00e493258875d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.8E-28 T 23-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_03320 174f4aecd6a65137d5d00e493258875d 78 Pfam PF00830 Ribosomal L28 family 3 61 1.0E-26 T 23-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_03320 174f4aecd6a65137d5d00e493258875d 78 SUPERFAMILY SSF143800 2 77 5.3E-30 T 23-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_03320 174f4aecd6a65137d5d00e493258875d 78 Gene3D G3DSA:2.30.170.40 2 78 6.1E-33 T 23-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG60_03320 174f4aecd6a65137d5d00e493258875d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.279 T 23-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG60_04180 a573a24e6b49ea98b74a83ff63636f7b 128 Gene3D G3DSA:3.30.230.10 2 128 8.3E-50 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG60_04180 a573a24e6b49ea98b74a83ff63636f7b 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 30.829 T 23-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CDG60_04180 a573a24e6b49ea98b74a83ff63636f7b 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 23-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CDG60_04180 a573a24e6b49ea98b74a83ff63636f7b 128 SUPERFAMILY SSF54211 4 128 2.12E-46 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG60_04180 a573a24e6b49ea98b74a83ff63636f7b 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 1.3E-43 T 23-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CDG60_08965 867b059d2c1c1d4c1944686a827444d0 384 Pfam PF01266 FAD dependent oxidoreductase 7 374 3.6E-33 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG60_08965 867b059d2c1c1d4c1944686a827444d0 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.5E-6 T 23-10-2018 CDG60_08965 867b059d2c1c1d4c1944686a827444d0 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.5E-6 T 23-10-2018 CDG60_08965 867b059d2c1c1d4c1944686a827444d0 384 Gene3D G3DSA:3.50.50.60 7 375 8.8E-39 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08965 867b059d2c1c1d4c1944686a827444d0 384 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 7 376 3.1E-89 T 23-10-2018 IPR017741 FAD-dependent oxidoreductase, HpnW CDG60_08965 867b059d2c1c1d4c1944686a827444d0 384 SUPERFAMILY SSF51905 6 370 2.72E-33 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG60_08965 867b059d2c1c1d4c1944686a827444d0 384 Gene3D G3DSA:3.30.9.10 87 343 8.8E-39 T 23-10-2018 CDG60_04265 acee4d1d13ce157464827234dd05365d 412 SUPERFAMILY SSF53335 193 301 1.19E-15 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_04265 acee4d1d13ce157464827234dd05365d 412 Pfam PF13679 Methyltransferase domain 169 304 2.3E-30 T 23-10-2018 IPR025714 Methyltransferase domain CDG60_04265 acee4d1d13ce157464827234dd05365d 412 Gene3D G3DSA:3.40.50.150 157 287 3.5E-11 T 23-10-2018 CDG60_11855 1701070729aaaa0892c7e7ee22336468 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.669 T 23-10-2018 IPR005583 Peroxide stress protein YaaA CDG60_11855 1701070729aaaa0892c7e7ee22336468 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 4.8E-87 T 23-10-2018 IPR005583 Peroxide stress protein YaaA CDG60_11820 ab2372cf9d967a1f5bbaa8c2591d46ff 452 Gene3D G3DSA:3.40.710.10 33 296 1.2E-78 T 23-10-2018 CDG60_11820 ab2372cf9d967a1f5bbaa8c2591d46ff 452 SUPERFAMILY SSF56601 19 295 1.34E-70 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_11820 ab2372cf9d967a1f5bbaa8c2591d46ff 452 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 45 277 2.0E-63 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDG60_11820 ab2372cf9d967a1f5bbaa8c2591d46ff 452 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.2E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_11820 ab2372cf9d967a1f5bbaa8c2591d46ff 452 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 76 87 5.2E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_11820 ab2372cf9d967a1f5bbaa8c2591d46ff 452 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.2E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG60_00560 6eb92bf65ecabe8b95eff856d1447d65 99 Pfam PF01810 LysE type translocator 14 89 3.2E-10 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_06810 bf4913d9554f689d5d583d781bfb5ed9 223 PIRSF PIRSF006293 1 223 3.4E-78 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG60_06810 bf4913d9554f689d5d583d781bfb5ed9 223 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 205 3.6E-63 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG60_06810 bf4913d9554f689d5d583d781bfb5ed9 223 Gene3D G3DSA:3.40.50.620 3 219 1.8E-74 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_06810 bf4913d9554f689d5d583d781bfb5ed9 223 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 218 54.446 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG60_06810 bf4913d9554f689d5d583d781bfb5ed9 223 Pfam PF06508 Queuosine biosynthesis protein QueC 4 211 1.4E-77 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG60_06810 bf4913d9554f689d5d583d781bfb5ed9 223 SUPERFAMILY SSF52402 4 222 3.75E-63 T 23-10-2018 CDG60_16965 3549c8bd2c8bb28b4a0ce59e0e22337e 125 Gene3D G3DSA:3.40.630.30 1 111 1.2E-17 T 23-10-2018 CDG60_16965 3549c8bd2c8bb28b4a0ce59e0e22337e 125 Pfam PF12568 Acetyltransferase (GNAT) domain 3 99 1.7E-11 T 23-10-2018 IPR000182 GNAT domain CDG60_16965 3549c8bd2c8bb28b4a0ce59e0e22337e 125 SUPERFAMILY SSF55729 1 108 4.56E-12 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_02865 8c164d908a659f7a6289ca66eac7207b 179 Gene3D G3DSA:1.10.287.700 46 174 5.4E-5 T 23-10-2018 CDG60_10865 3974868e3bccd61455e1222f54d0ddae 140 Pfam PF05232 Chlorhexidine efflux transporter 5 64 4.2E-17 T 23-10-2018 IPR007896 Chlorhexidine efflux transporter CDG60_10865 3974868e3bccd61455e1222f54d0ddae 140 Pfam PF05232 Chlorhexidine efflux transporter 70 133 6.0E-22 T 23-10-2018 IPR007896 Chlorhexidine efflux transporter CDG60_01215 93c7cf294d006226bcc26869b56f3cc7 186 SUPERFAMILY SSF51161 7 136 1.25E-31 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_01215 93c7cf294d006226bcc26869b56f3cc7 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 1.9E-4 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_01215 93c7cf294d006226bcc26869b56f3cc7 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 1.1E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_01215 93c7cf294d006226bcc26869b56f3cc7 186 Gene3D G3DSA:2.160.10.10 1 182 2.0E-44 T 23-10-2018 CDG60_10365 14efd8a8a4a5452f5b0b3a92d290d828 253 Gene3D G3DSA:3.90.550.10 1 250 3.7E-89 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_10365 14efd8a8a4a5452f5b0b3a92d290d828 253 SUPERFAMILY SSF53448 3 246 6.86E-51 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_10365 14efd8a8a4a5452f5b0b3a92d290d828 253 Pfam PF02348 Cytidylyltransferase 4 222 1.3E-48 T 23-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CDG60_10365 14efd8a8a4a5452f5b0b3a92d290d828 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 242 4.8E-76 T 23-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CDG60_10365 14efd8a8a4a5452f5b0b3a92d290d828 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 36.552 T 23-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CDG60_10145 8b135fc21501e649995071bff35ed7e1 889 Pfam PF00652 Ricin-type beta-trefoil lectin domain 738 857 2.4E-12 T 23-10-2018 IPR000772 Ricin B, lectin domain CDG60_10145 8b135fc21501e649995071bff35ed7e1 889 Gene3D G3DSA:2.80.10.50 740 860 9.8E-15 T 23-10-2018 CDG60_10145 8b135fc21501e649995071bff35ed7e1 889 Pfam PF10462 Peptidase M66 155 457 3.0E-44 T 23-10-2018 IPR019503 Peptidase M66 domain GO:0004222 CDG60_10145 8b135fc21501e649995071bff35ed7e1 889 SUPERFAMILY SSF50370 742 859 3.18E-17 T 23-10-2018 IPR035992 Ricin B-like lectins CDG60_10145 8b135fc21501e649995071bff35ed7e1 889 SMART SM00458 731 860 6.7E-8 T 23-10-2018 IPR000772 Ricin B, lectin domain CDG60_17520 c27568f2cf27aa600314c9e728bd84e1 175 Pfam PF01872 RibD C-terminal domain 9 162 2.2E-12 T 23-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CDG60_17520 c27568f2cf27aa600314c9e728bd84e1 175 Gene3D G3DSA:3.40.430.10 7 174 7.4E-37 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG60_17520 c27568f2cf27aa600314c9e728bd84e1 175 SUPERFAMILY SSF53597 2 167 3.8E-30 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG60_12885 7f484aa745555b9b3d17f321fd74e5b7 932 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 220 262 9.1E-7 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_12885 7f484aa745555b9b3d17f321fd74e5b7 932 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 843 877 2.0E-5 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_12885 7f484aa745555b9b3d17f321fd74e5b7 932 Gene3D G3DSA:2.60.40.740 203 350 7.8E-7 T 23-10-2018 CDG60_12885 7f484aa745555b9b3d17f321fd74e5b7 932 SUPERFAMILY SSF49401 219 331 5.72E-5 T 23-10-2018 IPR008966 Adhesion domain superfamily CDG60_16560 020c5f45f3f2b9a8587b738419f0b0f3 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 23-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 CDG60_16560 020c5f45f3f2b9a8587b738419f0b0f3 127 Gene3D G3DSA:3.30.1330.40 3 126 1.4E-51 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_16560 020c5f45f3f2b9a8587b738419f0b0f3 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 2.7E-49 T 23-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 CDG60_16560 020c5f45f3f2b9a8587b738419f0b0f3 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 6.6E-39 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG60_16560 020c5f45f3f2b9a8587b738419f0b0f3 127 SUPERFAMILY SSF55298 1 126 1.73E-45 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_05925 b6834d9160b360cc679a9893e8fb9bf7 306 Gene3D G3DSA:3.40.50.620 21 300 2.9E-45 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_05925 b6834d9160b360cc679a9893e8fb9bf7 306 PIRSF PIRSF004976 5 298 3.6E-69 T 23-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CDG60_05925 b6834d9160b360cc679a9893e8fb9bf7 306 SUPERFAMILY SSF52402 26 244 3.03E-53 T 23-10-2018 CDG60_05925 b6834d9160b360cc679a9893e8fb9bf7 306 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 17 279 55.046 T 23-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 CDG60_05925 b6834d9160b360cc679a9893e8fb9bf7 306 Pfam PF01171 PP-loop family 49 213 1.2E-14 T 23-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CDG60_06840 a4f72f9e2f53c6b04b86cae6b6dfc367 353 SUPERFAMILY SSF52540 3 243 4.58E-86 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_06840 a4f72f9e2f53c6b04b86cae6b6dfc367 353 Pfam PF12857 TOBE-like domain 287 341 3.7E-7 T 23-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CDG60_06840 a4f72f9e2f53c6b04b86cae6b6dfc367 353 SMART SM00382 27 214 1.5E-20 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_06840 a4f72f9e2f53c6b04b86cae6b6dfc367 353 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.8E-122 T 23-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 CDG60_06840 a4f72f9e2f53c6b04b86cae6b6dfc367 353 Pfam PF00005 ABC transporter 18 164 3.5E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_06840 a4f72f9e2f53c6b04b86cae6b6dfc367 353 Gene3D G3DSA:3.40.50.300 2 305 1.9E-81 T 23-10-2018 CDG60_06840 a4f72f9e2f53c6b04b86cae6b6dfc367 353 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_14890 b8d19fb2369721c874f1b47b181ce2ec 141 SUPERFAMILY SSF82784 1 139 2.88E-44 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG60_14890 b8d19fb2369721c874f1b47b181ce2ec 141 Gene3D G3DSA:3.30.300.20 47 140 2.1E-32 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_14890 b8d19fb2369721c874f1b47b181ce2ec 141 Gene3D G3DSA:2.20.25.10 1 46 3.3E-23 T 23-10-2018 CDG60_14890 b8d19fb2369721c874f1b47b181ce2ec 141 Pfam PF02566 OsmC-like protein 41 137 4.0E-17 T 23-10-2018 IPR003718 OsmC/Ohr family CDG60_14890 b8d19fb2369721c874f1b47b181ce2ec 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 1.3E-56 T 23-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 CDG60_08700 b307bae22222a9feb14b0b9dbd53e846 119 Pfam PF11367 Protein of unknown function (DUF3168) 13 85 1.1E-9 T 23-10-2018 IPR021508 Tail completion protein CDG60_11195 83cf442f653a1b9ce50841151d1ca306 300 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 297 31.293 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDG60_11195 83cf442f653a1b9ce50841151d1ca306 300 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 291 1.4E-83 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDG60_11195 83cf442f653a1b9ce50841151d1ca306 300 SUPERFAMILY SSF53335 78 291 2.99E-34 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_11195 83cf442f653a1b9ce50841151d1ca306 300 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 297 4.9E-88 T 23-10-2018 CDG60_11195 83cf442f653a1b9ce50841151d1ca306 300 PIRSF PIRSF000401 1 299 1.4E-82 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDG60_11195 83cf442f653a1b9ce50841151d1ca306 300 Gene3D G3DSA:3.40.50.150 103 300 2.2E-51 T 23-10-2018 CDG60_09730 526de86c2b8ec539b0c0563ee6c7d351 467 Pfam PF17289 Terminase RNaseH-like domain 305 449 3.0E-17 T 23-10-2018 IPR035421 Terminase, large subunit gp17-like CDG60_09730 526de86c2b8ec539b0c0563ee6c7d351 467 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 316 451 2.3E-25 T 23-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit CDG60_05890 b8d70c3aaecc10ec1c7242c07aadf9bf 378 SUPERFAMILY SSF51695 37 370 4.71E-75 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG60_05890 b8d70c3aaecc10ec1c7242c07aadf9bf 378 Gene3D G3DSA:3.20.20.190 34 371 1.6E-107 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG60_05890 b8d70c3aaecc10ec1c7242c07aadf9bf 378 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 41 364 1.3E-46 T 23-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CDG60_12915 bb92683f65abe4c2e46e7784e8632aff 169 Gene3D G3DSA:3.40.1410.10 1 159 8.8E-35 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG60_12915 bb92683f65abe4c2e46e7784e8632aff 169 Pfam PF04345 Chorismate lyase 3 153 3.5E-22 T 23-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CDG60_12915 bb92683f65abe4c2e46e7784e8632aff 169 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 5 159 21.037 T 23-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CDG60_12915 bb92683f65abe4c2e46e7784e8632aff 169 SUPERFAMILY SSF64288 5 159 7.77E-38 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG60_16135 bc859f8181f38162ed2a45dc7418533b 272 SUPERFAMILY SSF52540 12 240 3.3E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16135 bc859f8181f38162ed2a45dc7418533b 272 SMART SM00382 37 225 3.4E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_16135 bc859f8181f38162ed2a45dc7418533b 272 Pfam PF00005 ABC transporter 28 177 5.1E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_16135 bc859f8181f38162ed2a45dc7418533b 272 Gene3D G3DSA:3.40.50.300 10 263 1.3E-67 T 23-10-2018 CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 SUPERFAMILY SSF103088 69 179 4.32E-34 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 79 181 9.6E-43 T 23-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 Gene3D G3DSA:3.30.1330.60 69 182 8.6E-40 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 Pfam PF00691 OmpA family 81 175 1.3E-20 T 23-10-2018 IPR006665 OmpA-like domain CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 181 29.018 T 23-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 PRINTS PR01021 OMPA domain signature 111 126 6.2E-17 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 PRINTS PR01021 OMPA domain signature 126 142 6.2E-17 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 PRINTS PR01021 OMPA domain signature 81 103 6.2E-17 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG60_06645 b52e0d68aef346fde3a9908171a9231b 189 ProSitePatterns PS01068 OmpA-like domain. 113 157 - T 23-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CDG60_13385 e3a879255bbc9b0a819606ce2c997632 137 Pfam PF13994 PgaD-like protein 6 134 5.2E-27 T 23-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 CDG60_13385 e3a879255bbc9b0a819606ce2c997632 137 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 6 137 1.8E-35 T 23-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 CDG60_12630 ada62d47d4658da3ee71627ee0ac68bf 366 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 4 359 3.3E-96 T 23-10-2018 IPR017740 Type VI secretion system-associated, ImpA CDG60_12630 ada62d47d4658da3ee71627ee0ac68bf 366 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 131 2.9E-30 T 23-10-2018 IPR010657 ImpA, N-terminal CDG60_06615 0bffe91722fde6205bc885c2c1a80d5e 134 Pfam PF11304 Protein of unknown function (DUF3106) 39 89 7.2E-7 T 23-10-2018 IPR021455 Protein of unknown function DUF3106 CDG60_09910 efd61278b22ae68212a290e627d7545c 197 Gene3D G3DSA:3.40.109.10 1 197 5.0E-82 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_09910 efd61278b22ae68212a290e627d7545c 197 SUPERFAMILY SSF55469 1 196 2.36E-68 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_09910 efd61278b22ae68212a290e627d7545c 197 Pfam PF00881 Nitroreductase family 8 175 1.2E-15 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG60_01610 1c649c757c56c7d15859eb1c0a4154f3 333 SUPERFAMILY SSF51182 54 305 7.71E-45 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_01610 1c649c757c56c7d15859eb1c0a4154f3 333 Gene3D G3DSA:2.60.120.10 44 294 1.3E-53 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_01610 1c649c757c56c7d15859eb1c0a4154f3 333 Pfam PF05726 Pirin C-terminal cupin domain 199 299 5.3E-21 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDG60_01610 1c649c757c56c7d15859eb1c0a4154f3 333 Pfam PF02678 Pirin 48 129 5.5E-21 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG60_01610 1c649c757c56c7d15859eb1c0a4154f3 333 Gene3D G3DSA:2.60.120.10 152 268 1.3E-53 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_10120 0a574558704d746ec17b8a47d37cf076 261 SUPERFAMILY SSF52833 161 260 3.07E-7 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_10120 0a574558704d746ec17b8a47d37cf076 261 Pfam PF13417 Glutathione S-transferase, N-terminal domain 162 260 2.0E-9 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_10120 0a574558704d746ec17b8a47d37cf076 261 Pfam PF13417 Glutathione S-transferase, N-terminal domain 38 114 2.9E-17 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG60_10120 0a574558704d746ec17b8a47d37cf076 261 SUPERFAMILY SSF52833 36 132 2.99E-19 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_10120 0a574558704d746ec17b8a47d37cf076 261 Gene3D G3DSA:3.40.30.10 31 132 1.4E-16 T 23-10-2018 CDG60_10120 0a574558704d746ec17b8a47d37cf076 261 Gene3D G3DSA:3.40.30.10 159 261 3.7E-15 T 23-10-2018 CDG60_16095 b0d69108ba7c71979dfa46e17422347e 227 Gene3D G3DSA:3.40.50.2020 45 221 1.0E-17 T 23-10-2018 CDG60_16095 b0d69108ba7c71979dfa46e17422347e 227 Pfam PF00156 Phosphoribosyl transferase domain 118 212 7.9E-12 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG60_16095 b0d69108ba7c71979dfa46e17422347e 227 SUPERFAMILY SSF53271 51 206 1.44E-21 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 Gene3D G3DSA:3.30.70.270 10 163 3.4E-39 T 23-10-2018 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 Pfam PF00817 impB/mucB/samB family 11 157 1.0E-32 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 363 1.6E-14 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 Gene3D G3DSA:3.30.1490.100 253 365 1.8E-6 T 23-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 Gene3D G3DSA:2.30.40.20 16 79 3.4E-39 T 23-10-2018 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 SUPERFAMILY SSF100879 254 356 1.33E-6 T 23-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 Pfam PF13438 Domain of unknown function (DUF4113) 381 424 1.6E-8 T 23-10-2018 IPR025188 Domain of unknown function DUF4113 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 Gene3D G3DSA:1.10.150.20 177 238 1.5E-7 T 23-10-2018 CDG60_08800 cb48cd89735df367ad0ad249fd19bf60 431 SUPERFAMILY SSF56672 7 247 5.78E-61 T 23-10-2018 CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 SMART SM00487 22 229 3.0E-56 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 Gene3D G3DSA:3.40.50.300 1 217 6.5E-73 T 23-10-2018 CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 Pfam PF00270 DEAD/DEAH box helicase 27 200 9.2E-47 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 2 382 49.018 T 23-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 Gene3D G3DSA:3.40.50.300 220 377 1.6E-49 T 23-10-2018 CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 Pfam PF00271 Helicase conserved C-terminal domain 237 346 3.3E-29 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 SMART SM00490 265 346 6.4E-29 T 23-10-2018 IPR001650 Helicase, C-terminal CDG60_07750 eba504fce9d4e653f4804bd0d456c4d8 383 SUPERFAMILY SSF52540 78 365 3.22E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_16285 11a37bd9a0e3181ab2fe8b64dc3e98ca 212 SUPERFAMILY SSF53335 7 192 5.36E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_16285 11a37bd9a0e3181ab2fe8b64dc3e98ca 212 Pfam PF08241 Methyltransferase domain 40 132 6.5E-18 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG60_16285 11a37bd9a0e3181ab2fe8b64dc3e98ca 212 Gene3D G3DSA:3.40.50.150 27 193 1.1E-23 T 23-10-2018 CDG60_05855 bbac051b5acbf59f61364004822d5fdd 312 SUPERFAMILY SSF111331 6 308 1.44E-54 T 23-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDG60_05855 bbac051b5acbf59f61364004822d5fdd 312 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 135 1.0E-21 T 23-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CDG60_05855 bbac051b5acbf59f61364004822d5fdd 312 Gene3D G3DSA:2.60.200.40 138 297 5.2E-19 T 23-10-2018 CDG60_05855 bbac051b5acbf59f61364004822d5fdd 312 SMART SM00046 7 139 3.7E-4 T 23-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CDG60_05855 bbac051b5acbf59f61364004822d5fdd 312 Gene3D G3DSA:3.40.50.10330 1 137 1.0E-21 T 23-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CDG60_06140 21d112b953d723f1c986b623a11b5878 571 Pfam PF03929 PepSY-associated TM region 16 411 4.6E-66 T 23-10-2018 IPR005625 PepSY-associated TM protein CDG60_16750 f491ccb2f78f1451f5e08f85b749c42f 174 Gene3D G3DSA:2.30.30.830 76 170 6.7E-29 T 23-10-2018 CDG60_16750 f491ccb2f78f1451f5e08f85b749c42f 174 Pfam PF04351 Pilus assembly protein, PilP 26 169 1.9E-42 T 23-10-2018 IPR007446 Pilus assembly protein PilP CDG60_16750 f491ccb2f78f1451f5e08f85b749c42f 174 PIRSF PIRSF016481 1 171 1.3E-36 T 23-10-2018 IPR007446 Pilus assembly protein PilP CDG60_11555 2176a918cb971fd08ab058a295cd0cf6 68 Pfam PF13619 KTSC domain 7 56 3.1E-6 T 23-10-2018 IPR025309 KTSC domain CDG60_02815 abf8039c8db22b44889d94b5947ea1f9 136 Gene3D G3DSA:2.170.150.70 8 121 4.9E-16 T 23-10-2018 CDG60_02815 abf8039c8db22b44889d94b5947ea1f9 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 116 8.7E-22 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDG60_02815 abf8039c8db22b44889d94b5947ea1f9 136 SUPERFAMILY SSF51316 5 136 3.56E-44 T 23-10-2018 IPR011057 Mss4-like superfamily CDG60_01270 8c19092270354b20b61b4d9bb3d11690 290 Gene3D G3DSA:3.60.15.10 3 289 1.2E-99 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_01270 8c19092270354b20b61b4d9bb3d11690 290 SUPERFAMILY SSF56281 16 289 8.54E-43 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_01270 8c19092270354b20b61b4d9bb3d11690 290 SMART SM00849 16 206 2.1E-21 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_01270 8c19092270354b20b61b4d9bb3d11690 290 Pfam PF00753 Metallo-beta-lactamase superfamily 14 206 1.2E-20 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_16935 8ff2a3428d25698d0210b80d0d73b48f 248 Pfam PF08241 Methyltransferase domain 39 127 3.1E-16 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG60_16935 8ff2a3428d25698d0210b80d0d73b48f 248 Gene3D G3DSA:3.40.50.150 16 243 1.4E-78 T 23-10-2018 CDG60_16935 8ff2a3428d25698d0210b80d0d73b48f 248 SUPERFAMILY SSF53335 3 198 2.5E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_16935 8ff2a3428d25698d0210b80d0d73b48f 248 Gene3D G3DSA:1.10.10.2560 132 233 1.4E-78 T 23-10-2018 CDG60_11750 86aaae5e093d9d228a823dfe53bb9f29 398 Pfam PF06224 Winged helix DNA-binding domain 32 377 3.8E-68 T 23-10-2018 IPR009351 Protein of unknown function DUF1006 CDG60_01410 816bba857c3e9361df36975b2476410b 139 Pfam PF07681 DoxX 23 101 7.6E-19 T 23-10-2018 IPR032808 DoxX family CDG60_17450 0e3d4cb37a892174bb8d7e03373bd7c5 255 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 255 1.5E-18 T 23-10-2018 IPR025737 MetA-pathway of phenol degradation, putative CDG60_14090 ee6c9751833dbcc915535a7b4150be91 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 3.1E-54 T 23-10-2018 IPR006286 Deglycase PfpI CDG60_14090 ee6c9751833dbcc915535a7b4150be91 192 Pfam PF01965 DJ-1/PfpI family 3 184 5.1E-50 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDG60_14090 ee6c9751833dbcc915535a7b4150be91 192 Gene3D G3DSA:3.40.50.880 1 192 7.1E-53 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_14090 ee6c9751833dbcc915535a7b4150be91 192 SUPERFAMILY SSF52317 1 186 3.85E-49 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG60_15730 d7fe4fc95a6b193234cd11b5aeef5ebd 173 SUPERFAMILY SSF55068 1 163 2.75E-71 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG60_15730 d7fe4fc95a6b193234cd11b5aeef5ebd 173 Gene3D G3DSA:3.30.1060.10 1 160 1.4E-69 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG60_15730 d7fe4fc95a6b193234cd11b5aeef5ebd 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 157 36.516 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG60_15730 d7fe4fc95a6b193234cd11b5aeef5ebd 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 152 1.8E-59 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG60_15730 d7fe4fc95a6b193234cd11b5aeef5ebd 173 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 1.3E-62 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG60_05375 b9dd8bf885abd5314cc3b66d240db56d 163 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.1E-14 T 23-10-2018 IPR010710 Protein of unknown function DUF1289 CDG60_14145 85993fea06b244f176a30bb95855009c 279 SUPERFAMILY SSF111364 32 279 6.54E-18 T 23-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDG60_07790 1d1b60b90579da4c8b1d6b1c07a21a8d 194 Pfam PF02674 Colicin V production protein 4 141 3.1E-27 T 23-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 Pfam PF08238 Sel1 repeat 144 165 0.1 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 Pfam PF08238 Sel1 repeat 55 84 1.3 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 Pfam PF08238 Sel1 repeat 19 53 4.8E-5 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 Pfam PF08238 Sel1 repeat 100 133 0.8 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 Gene3D G3DSA:1.25.40.10 4 173 3.2E-35 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 SMART SM00671 19 53 0.0015 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 SMART SM00671 99 134 0.21 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 SMART SM00671 135 170 6.1 T 23-10-2018 IPR006597 Sel1-like repeat CDG60_06130 3d78f1d2ba06f4cee1d3485ffed95d7a 173 SUPERFAMILY SSF81901 14 167 2.09E-23 T 23-10-2018 CDG60_01860 c6197dfff900357ead9b6bd1b597854d 214 Pfam PF03458 UPF0126 domain 91 163 3.7E-20 T 23-10-2018 IPR005115 Uncharacterised domain UPF0126 CDG60_01860 c6197dfff900357ead9b6bd1b597854d 214 Pfam PF03458 UPF0126 domain 5 79 2.9E-20 T 23-10-2018 IPR005115 Uncharacterised domain UPF0126 CDG60_17160 a699cbdb16c7de09d25da53ec4ce5b55 559 Pfam PF03235 Protein of unknown function DUF262 13 216 1.5E-31 T 23-10-2018 IPR004919 Domain of unknown function DUF262 CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 78 96 1.7E-25 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 190 204 1.7E-25 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 1.7E-25 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 156 174 1.7E-25 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 262 329 2.1E-7 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 Gene3D G3DSA:3.40.50.300 14 258 8.6E-55 T 23-10-2018 CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 SUPERFAMILY SSF52540 38 318 1.65E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 Gene3D G3DSA:1.10.8.60 261 348 9.4E-8 T 23-10-2018 CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 SMART SM00382 74 240 2.1E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_02385 4a584729c6f81cb52de2eb4b65588fca 350 Pfam PF07724 AAA domain (Cdc48 subfamily) 73 253 2.1E-32 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG60_00740 1a4aa884af337164c48c20d2ae5c1d55 551 Pfam PF01844 HNH endonuclease 491 535 5.2E-5 T 23-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CDG60_13345 dbfaba90760819ab23d06b3c6ffb31db 163 Pfam PF10698 Protein of unknown function (DUF2505) 14 156 2.0E-11 T 23-10-2018 IPR019639 Protein of unknown function DUF2505 CDG60_11780 536b04d67a4013a25c7cfac8ff6edc30 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CDG60_11780 536b04d67a4013a25c7cfac8ff6edc30 417 Gene3D G3DSA:3.40.718.10 1 417 7.8E-179 T 23-10-2018 CDG60_11780 536b04d67a4013a25c7cfac8ff6edc30 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 412 1.3E-110 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG60_11780 536b04d67a4013a25c7cfac8ff6edc30 417 SUPERFAMILY SSF53659 4 416 1.57E-140 T 23-10-2018 CDG60_11780 536b04d67a4013a25c7cfac8ff6edc30 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 417 8.9E-217 T 23-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG60_11780 536b04d67a4013a25c7cfac8ff6edc30 417 SMART SM01329 30 412 1.5E-173 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG60_01910 72d9eb15e9bb0b17a84e013abd05c10d 253 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 12 231 4.2E-24 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG60_01910 72d9eb15e9bb0b17a84e013abd05c10d 253 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 24 231 6.8E-20 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG60_13105 3a96801a6d1d83a9072622bb1f523a39 440 Gene3D G3DSA:3.30.559.10 10 201 1.5E-33 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDG60_13105 3a96801a6d1d83a9072622bb1f523a39 440 SUPERFAMILY SSF52777 10 180 4.0E-24 T 23-10-2018 CDG60_13105 3a96801a6d1d83a9072622bb1f523a39 440 Gene3D G3DSA:3.30.559.30 217 434 5.3E-30 T 23-10-2018 CDG60_13105 3a96801a6d1d83a9072622bb1f523a39 440 Pfam PF00668 Condensation domain 7 432 1.7E-44 T 23-10-2018 IPR001242 Condensation domain CDG60_13105 3a96801a6d1d83a9072622bb1f523a39 440 SUPERFAMILY SSF52777 187 427 7.45E-24 T 23-10-2018 CDG60_08895 11d3ef178deee0d00842f41b8032b145 210 Gene3D G3DSA:3.90.1140.10 28 196 4.1E-6 T 23-10-2018 CDG60_08895 11d3ef178deee0d00842f41b8032b145 210 SUPERFAMILY SSF55144 40 169 2.96E-6 T 23-10-2018 IPR009097 Cyclic phosphodiesterase CDG60_08895 11d3ef178deee0d00842f41b8032b145 210 Pfam PF13563 2'-5' RNA ligase superfamily 65 193 2.1E-9 T 23-10-2018 CDG60_14375 e650225b78a9c2d074d717d040d15076 259 SUPERFAMILY SSF53474 2 258 1.5E-68 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_14375 e650225b78a9c2d074d717d040d15076 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.3E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_14375 e650225b78a9c2d074d717d040d15076 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 2.3E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_14375 e650225b78a9c2d074d717d040d15076 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.3E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_14375 e650225b78a9c2d074d717d040d15076 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.3E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_14375 e650225b78a9c2d074d717d040d15076 259 Pfam PF00561 alpha/beta hydrolase fold 22 245 4.0E-21 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_14375 e650225b78a9c2d074d717d040d15076 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 257 2.5E-95 T 23-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 CDG60_14375 e650225b78a9c2d074d717d040d15076 259 Gene3D G3DSA:3.40.50.1820 3 258 2.2E-69 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_14325 50733023bf063c333f0cb1de887728ca 292 Pfam PF13557 Putative MetA-pathway of phenol degradation 64 287 3.5E-57 T 23-10-2018 IPR025737 MetA-pathway of phenol degradation, putative CDG60_11010 ae37eb82e62d4f08cb61de944ddb0dfe 554 Pfam PF02470 MlaD protein 182 246 4.8E-7 T 23-10-2018 IPR003399 Mce/MlaD CDG60_11010 ae37eb82e62d4f08cb61de944ddb0dfe 554 Pfam PF02470 MlaD protein 64 154 1.7E-8 T 23-10-2018 IPR003399 Mce/MlaD CDG60_11010 ae37eb82e62d4f08cb61de944ddb0dfe 554 Pfam PF02470 MlaD protein 306 403 3.0E-16 T 23-10-2018 IPR003399 Mce/MlaD CDG60_06690 d0475209c0bb66dc853cab57cacfbb5b 554 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 501 8.2E-111 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG60_06690 d0475209c0bb66dc853cab57cacfbb5b 554 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 501 1.5E-134 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG60_13165 7feb6b4f29f373e53adfc9f0200bc18b 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 57.111 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG60_13165 7feb6b4f29f373e53adfc9f0200bc18b 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 3.0E-64 T 23-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CDG60_13165 7feb6b4f29f373e53adfc9f0200bc18b 304 PIRSF PIRSF002936 2 304 8.6E-157 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG60_13165 7feb6b4f29f373e53adfc9f0200bc18b 304 SUPERFAMILY SSF52402 8 211 1.77E-72 T 23-10-2018 CDG60_13165 7feb6b4f29f373e53adfc9f0200bc18b 304 Gene3D G3DSA:3.40.50.620 9 214 3.7E-64 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_13165 7feb6b4f29f373e53adfc9f0200bc18b 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 2.0E-160 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG60_08225 f694e943420e1ef19ae04fdda8bc7941 457 Pfam PF03109 ABC1 family 128 232 5.8E-26 T 23-10-2018 IPR004147 UbiB domain CDG60_08225 f694e943420e1ef19ae04fdda8bc7941 457 SUPERFAMILY SSF56112 107 317 2.04E-9 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_12685 cfe706337bf5ac14a6b6b0990a93ed98 258 SUPERFAMILY SSF53213 6 258 1.26E-83 T 23-10-2018 CDG60_12685 cfe706337bf5ac14a6b6b0990a93ed98 258 PIRSF PIRSF006157 1 258 3.1E-82 T 23-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CDG60_12685 cfe706337bf5ac14a6b6b0990a93ed98 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 1.9E-41 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CDG60_12685 cfe706337bf5ac14a6b6b0990a93ed98 258 Gene3D G3DSA:3.40.830.10 1 258 6.6E-85 T 23-10-2018 CDG60_15510 946e59920865bf9b196de079bce5d975 97 Gene3D G3DSA:3.30.70.100 1 90 3.0E-23 T 23-10-2018 CDG60_15510 946e59920865bf9b196de079bce5d975 97 SUPERFAMILY SSF54909 2 95 1.97E-16 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_12755 e021b97c63f326f8f2ab3abf9a907d98 244 Pfam PF01925 Sulfite exporter TauE/SafE 8 235 1.4E-29 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_09240 4f8e662fcac145c6cbb8085f97f8b561 310 SUPERFAMILY SSF103481 191 291 9.55E-7 T 23-10-2018 CDG60_09240 4f8e662fcac145c6cbb8085f97f8b561 310 Pfam PF00892 EamA-like transporter family 159 287 8.0E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_09240 4f8e662fcac145c6cbb8085f97f8b561 310 SUPERFAMILY SSF103481 44 140 2.22E-5 T 23-10-2018 CDG60_04605 14eec5eac52116d2e3a9f04467672d2b 243 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 3 242 19.528 T 23-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CDG60_04605 14eec5eac52116d2e3a9f04467672d2b 243 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 240 6.9E-40 T 23-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CDG60_04605 14eec5eac52116d2e3a9f04467672d2b 243 Gene3D G3DSA:2.160.20.70 100 239 3.5E-25 T 23-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CDG60_04605 14eec5eac52116d2e3a9f04467672d2b 243 SUPERFAMILY SSF63848 136 234 6.41E-26 T 23-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 CDG60_04605 14eec5eac52116d2e3a9f04467672d2b 243 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 138 234 3.5E-25 T 23-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CDG60_11560 33821739508a816bf953ffd1f6b0d1a5 197 SUPERFAMILY SSF53335 23 195 1.31E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_11560 33821739508a816bf953ffd1f6b0d1a5 197 Pfam PF01596 O-methyltransferase 33 165 4.6E-23 T 23-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CDG60_11560 33821739508a816bf953ffd1f6b0d1a5 197 Gene3D G3DSA:3.40.50.150 5 196 2.4E-42 T 23-10-2018 CDG60_14870 8ab64129771787d34da38b6f5e5648fc 322 SMART SM00331 126 320 2.0E-12 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG60_14870 8ab64129771787d34da38b6f5e5648fc 322 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 153 313 4.1E-23 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG60_14870 8ab64129771787d34da38b6f5e5648fc 322 Gene3D G3DSA:3.60.40.10 93 321 2.8E-40 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG60_07705 4d0c9e639024780d1a45a23b029b4ed3 642 SMART SM00387 543 637 2.1E-11 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_07705 4d0c9e639024780d1a45a23b029b4ed3 642 Gene3D G3DSA:3.30.565.10 514 634 7.2E-26 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_07705 4d0c9e639024780d1a45a23b029b4ed3 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 633 1.8E-10 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG60_07705 4d0c9e639024780d1a45a23b029b4ed3 642 SUPERFAMILY SSF55874 515 634 9.04E-17 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_05765 4cb60a656d82499c05ce3af91fdc8bb9 216 Gene3D G3DSA:3.40.50.150 31 216 8.2E-61 T 23-10-2018 CDG60_05765 4cb60a656d82499c05ce3af91fdc8bb9 216 Pfam PF01728 FtsJ-like methyltransferase 35 210 7.6E-58 T 23-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CDG60_05765 4cb60a656d82499c05ce3af91fdc8bb9 216 PIRSF PIRSF005461 3 216 4.2E-80 T 23-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CDG60_05765 4cb60a656d82499c05ce3af91fdc8bb9 216 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 19 212 30.492 T 23-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CDG60_05765 4cb60a656d82499c05ce3af91fdc8bb9 216 SUPERFAMILY SSF53335 34 212 1.02E-40 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_01550 3286d19b70ff940e23770ef35d0baa83 130 Pfam PF03899 ATP synthase I chain 16 112 2.5E-21 T 23-10-2018 IPR005598 ATP synthase protein I CDG60_06340 c82c4907dfc99489142a24edf77e9620 276 SUPERFAMILY SSF56925 141 275 2.2E-19 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_06340 c82c4907dfc99489142a24edf77e9620 276 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 140 275 5.2E-10 T 23-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain CDG60_06340 c82c4907dfc99489142a24edf77e9620 276 Gene3D G3DSA:2.40.160.90 135 276 4.3E-18 T 23-10-2018 CDG60_08750 a515c5dea570b3797e6ef88fa45d01cc 528 SUPERFAMILY SSF52266 363 527 8.7E-18 T 23-10-2018 CDG60_08750 a515c5dea570b3797e6ef88fa45d01cc 528 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 373 514 7.3E-9 T 23-10-2018 IPR013830 SGNH hydrolase-type esterase domain CDG60_08750 a515c5dea570b3797e6ef88fa45d01cc 528 Gene3D G3DSA:2.60.120.1360 244 374 9.5E-29 T 23-10-2018 CDG60_08750 a515c5dea570b3797e6ef88fa45d01cc 528 Gene3D G3DSA:3.40.50.1110 210 522 9.5E-29 T 23-10-2018 IPR036514 SGNH hydrolase superfamily CDG60_03705 303ebd93ee4c95755def34e075cbf0a0 215 SUPERFAMILY SSF56214 27 84 7.15E-10 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG60_03705 303ebd93ee4c95755def34e075cbf0a0 215 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 94 165 9.0E-15 T 23-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG60_03705 303ebd93ee4c95755def34e075cbf0a0 215 SUPERFAMILY SSF56214 93 197 2.09E-19 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG60_03705 303ebd93ee4c95755def34e075cbf0a0 215 Gene3D G3DSA:3.90.470.20 94 193 3.1E-14 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG60_18015 023ade3e6071da60162f3ac1f80e5578 137 Pfam PF04940 Sensors of blue-light using FAD 2 95 3.3E-27 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CDG60_18015 023ade3e6071da60162f3ac1f80e5578 137 Gene3D G3DSA:3.30.70.100 1 132 3.3E-33 T 23-10-2018 CDG60_18015 023ade3e6071da60162f3ac1f80e5578 137 SUPERFAMILY SSF54975 1 117 5.56E-32 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDG60_18015 023ade3e6071da60162f3ac1f80e5578 137 SMART SM01034 2 96 2.3E-32 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CDG60_04385 ace79373ca0fe5b4edcd371f493e56bf 221 Pfam PF00814 Glycoprotease family 33 143 2.1E-23 T 23-10-2018 IPR000905 Gcp-like domain CDG60_04385 ace79373ca0fe5b4edcd371f493e56bf 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 208 2.2E-47 T 23-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CDG60_04385 ace79373ca0fe5b4edcd371f493e56bf 221 SUPERFAMILY SSF53067 1 103 4.01E-22 T 23-10-2018 CDG60_04385 ace79373ca0fe5b4edcd371f493e56bf 221 Gene3D G3DSA:3.30.420.40 95 177 2.7E-55 T 23-10-2018 CDG60_04385 ace79373ca0fe5b4edcd371f493e56bf 221 Gene3D G3DSA:3.30.420.40 3 208 2.7E-55 T 23-10-2018 CDG60_04385 ace79373ca0fe5b4edcd371f493e56bf 221 SUPERFAMILY SSF53067 111 206 9.5E-15 T 23-10-2018 CDG60_11530 7b1a1963cc8d68594880df5a8e65b8f3 261 SUPERFAMILY SSF69593 18 164 9.81E-9 T 23-10-2018 CDG60_11530 7b1a1963cc8d68594880df5a8e65b8f3 261 Pfam PF01553 Acyltransferase 32 154 6.7E-10 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_11530 7b1a1963cc8d68594880df5a8e65b8f3 261 SMART SM00563 42 159 3.0E-10 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_11515 abd9361468d44bb9c4bb50e2e107fe89 692 Gene3D G3DSA:2.170.130.10 67 180 1.5E-16 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_11515 abd9361468d44bb9c4bb50e2e107fe89 692 SUPERFAMILY SSF56935 68 670 3.46E-77 T 23-10-2018 CDG60_11515 abd9361468d44bb9c4bb50e2e107fe89 692 Pfam PF00593 TonB dependent receptor 224 659 4.9E-33 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_11515 abd9361468d44bb9c4bb50e2e107fe89 692 Gene3D G3DSA:2.40.170.20 182 677 8.8E-51 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_11515 abd9361468d44bb9c4bb50e2e107fe89 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 163 1.6E-12 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_03610 821bbbe07d91e3b6cd84b4cc06355c41 307 SUPERFAMILY SSF103481 218 304 1.96E-15 T 23-10-2018 CDG60_03610 821bbbe07d91e3b6cd84b4cc06355c41 307 Pfam PF00892 EamA-like transporter family 10 147 6.2E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_03610 821bbbe07d91e3b6cd84b4cc06355c41 307 Pfam PF00892 EamA-like transporter family 162 300 1.5E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_03610 821bbbe07d91e3b6cd84b4cc06355c41 307 SUPERFAMILY SSF103481 48 151 2.48E-13 T 23-10-2018 CDG60_01400 e5f545b29b995574d5e757d77e8d0002 196 Pfam PF01810 LysE type translocator 13 166 4.9E-6 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_09570 91aac043113554a9e41cff8d70427eb0 315 Pfam PF10118 Predicted metal-dependent hydrolase 11 283 7.7E-62 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_09570 91aac043113554a9e41cff8d70427eb0 315 PIRSF PIRSF007580 1 303 3.7E-77 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_17175 4223c3bf1c5423b6da77af355cb3511c 561 SMART SM00267 397 561 8.8E-43 T 23-10-2018 IPR000160 GGDEF domain CDG60_17175 4223c3bf1c5423b6da77af355cb3511c 561 Pfam PF00990 Diguanylate cyclase, GGDEF domain 408 557 1.4E-36 T 23-10-2018 IPR000160 GGDEF domain CDG60_17175 4223c3bf1c5423b6da77af355cb3511c 561 Gene3D G3DSA:3.30.70.270 396 561 9.3E-45 T 23-10-2018 CDG60_17175 4223c3bf1c5423b6da77af355cb3511c 561 SUPERFAMILY SSF55073 413 559 6.28E-38 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_17175 4223c3bf1c5423b6da77af355cb3511c 561 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 405 560 1.0E-39 T 23-10-2018 IPR000160 GGDEF domain CDG60_08325 62aea6b7c7bed21580fe085e1d426824 98 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 19 94 2.8E-22 T 23-10-2018 IPR011846 Cyd operon protein YbgE CDG60_13250 dd7a639d5691e15f6b3f69dedcfa3af2 204 SMART SM00947 38 203 1.2E-51 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG60_13250 dd7a639d5691e15f6b3f69dedcfa3af2 204 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 50 57 - T 23-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG60_13250 dd7a639d5691e15f6b3f69dedcfa3af2 204 Gene3D G3DSA:3.40.1050.10 1 204 1.5E-58 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDG60_13250 dd7a639d5691e15f6b3f69dedcfa3af2 204 SUPERFAMILY SSF53056 3 203 1.07E-50 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDG60_13250 dd7a639d5691e15f6b3f69dedcfa3af2 204 Pfam PF00484 Carbonic anhydrase 45 199 1.1E-37 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG60_18035 f618ce08376644a1d9a1db4a1da77087 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 314 1.9E-116 T 23-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CDG60_18035 f618ce08376644a1d9a1db4a1da77087 321 Pfam PF03741 Integral membrane protein TerC family 80 283 6.3E-52 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDG60_11730 7bf0d747b66a1b3f25a06775670f13e4 215 SUPERFAMILY SSF51306 74 210 3.66E-18 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_11730 7bf0d747b66a1b3f25a06775670f13e4 215 Gene3D G3DSA:2.10.109.10 80 214 6.8E-26 T 23-10-2018 CDG60_11730 7bf0d747b66a1b3f25a06775670f13e4 215 Pfam PF00717 Peptidase S24-like 111 156 1.8E-7 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_15600 4c0ab6c58ffdc8104b4ab2eb490232b8 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 733 2.9E-89 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG60_15600 4c0ab6c58ffdc8104b4ab2eb490232b8 733 Gene3D G3DSA:2.40.170.20 191 733 1.1E-115 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_15600 4c0ab6c58ffdc8104b4ab2eb490232b8 733 Pfam PF00593 TonB dependent receptor 246 732 2.2E-59 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_15600 4c0ab6c58ffdc8104b4ab2eb490232b8 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 168 1.7E-15 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_15600 4c0ab6c58ffdc8104b4ab2eb490232b8 733 Gene3D G3DSA:2.170.130.10 51 179 1.2E-39 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_15600 4c0ab6c58ffdc8104b4ab2eb490232b8 733 SUPERFAMILY SSF56935 39 733 3.85E-124 T 23-10-2018 CDG60_11940 460df08c9d76b7d82fa54f8f180b4fbc 303 Pfam PF01513 ATP-NAD kinase 14 276 4.0E-63 T 23-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDG60_11940 460df08c9d76b7d82fa54f8f180b4fbc 303 Gene3D G3DSA:2.60.200.30 134 270 1.8E-89 T 23-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDG60_11940 460df08c9d76b7d82fa54f8f180b4fbc 303 Hamap MF_00361 NAD kinase [nadK]. 12 293 32.326 T 23-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDG60_11940 460df08c9d76b7d82fa54f8f180b4fbc 303 SUPERFAMILY SSF111331 13 295 1.15E-86 T 23-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDG60_11940 460df08c9d76b7d82fa54f8f180b4fbc 303 Gene3D G3DSA:3.40.50.10330 32 293 1.8E-89 T 23-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CDG60_06885 4a271a60571271b1bbe8432b4ae89d7d 244 Gene3D G3DSA:1.10.10.60 144 244 3.1E-17 T 23-10-2018 CDG60_06885 4a271a60571271b1bbe8432b4ae89d7d 244 SUPERFAMILY SSF46689 198 243 5.82E-6 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_06885 4a271a60571271b1bbe8432b4ae89d7d 244 SUPERFAMILY SSF51182 15 155 5.93E-10 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_06885 4a271a60571271b1bbe8432b4ae89d7d 244 SMART SM00342 160 242 1.2E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_06885 4a271a60571271b1bbe8432b4ae89d7d 244 Pfam PF12833 Helix-turn-helix domain 167 244 3.6E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG60_06885 4a271a60571271b1bbe8432b4ae89d7d 244 Gene3D G3DSA:2.60.120.10 6 82 5.4E-6 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_01980 8f05849a888db04ae73798bca508e790 135 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 130 3.1E-33 T 23-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CDG60_01980 8f05849a888db04ae73798bca508e790 135 Gene3D G3DSA:3.40.50.10110 1 134 2.3E-34 T 23-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CDG60_01980 8f05849a888db04ae73798bca508e790 135 SUPERFAMILY SSF102400 1 134 4.18E-33 T 23-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CDG60_16615 afcab3af2ae1175d2483bb793f36aed8 551 SUPERFAMILY SSF53649 244 517 7.48E-16 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_16615 afcab3af2ae1175d2483bb793f36aed8 551 Pfam PF00884 Sulfatase 218 510 1.5E-36 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG60_16615 afcab3af2ae1175d2483bb793f36aed8 551 Pfam PF08019 Domain of unknown function (DUF1705) 22 140 4.1E-8 T 23-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CDG60_16615 afcab3af2ae1175d2483bb793f36aed8 551 Gene3D G3DSA:3.40.720.10 204 543 1.1E-68 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_13125 6f13ddee274d71a340b7b02a52c46a95 338 Gene3D G3DSA:1.10.3470.10 13 336 3.0E-65 T 23-10-2018 IPR037294 ABC transporter, BtuC-like CDG60_13125 6f13ddee274d71a340b7b02a52c46a95 338 Pfam PF01032 FecCD transport family 24 329 9.3E-66 T 23-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 CDG60_13125 6f13ddee274d71a340b7b02a52c46a95 338 SUPERFAMILY SSF81345 8 329 3.4E-56 T 23-10-2018 IPR037294 ABC transporter, BtuC-like CDG60_11800 70b1f2fb6f68777dcf16a767ca9de981 342 Gene3D G3DSA:3.20.20.210 1 342 1.8E-134 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG60_11800 70b1f2fb6f68777dcf16a767ca9de981 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 1.4E-38 T 23-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CDG60_11800 70b1f2fb6f68777dcf16a767ca9de981 342 SUPERFAMILY SSF51726 7 340 1.22E-69 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG60_11800 70b1f2fb6f68777dcf16a767ca9de981 342 PIRSF PIRSF005632 1 342 1.3E-199 T 23-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit CDG60_08655 cd6cd16f54355b0cce2144c39fb31840 148 Pfam PF05119 Phage terminase, small subunit 44 133 2.0E-20 T 23-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family CDG60_08655 cd6cd16f54355b0cce2144c39fb31840 148 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 32 139 1.0E-21 T 23-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family CDG60_08975 86c711cd19aab882c682a50fc7c65e9c 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 7 259 1.4E-102 T 23-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CDG60_08975 86c711cd19aab882c682a50fc7c65e9c 271 Gene3D G3DSA:1.10.150.240 26 103 8.2E-107 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG60_08975 86c711cd19aab882c682a50fc7c65e9c 271 SUPERFAMILY SSF56784 8 261 1.1E-50 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_08975 86c711cd19aab882c682a50fc7c65e9c 271 Gene3D G3DSA:3.40.50.1000 10 271 8.2E-107 T 23-10-2018 IPR023214 HAD superfamily CDG60_08975 86c711cd19aab882c682a50fc7c65e9c 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 205 5.8E-6 T 23-10-2018 CDG60_08975 86c711cd19aab882c682a50fc7c65e9c 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 116.103 T 23-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CDG60_13255 a1608bed21c02ee0ce3b4d78a465df6e 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 273 287 5.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_13255 a1608bed21c02ee0ce3b4d78a465df6e 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 152 165 5.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_13255 a1608bed21c02ee0ce3b4d78a465df6e 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 121 5.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_13255 a1608bed21c02ee0ce3b4d78a465df6e 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 166 179 5.5E-12 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_13255 a1608bed21c02ee0ce3b4d78a465df6e 346 Gene3D G3DSA:3.40.50.1820 39 337 4.5E-76 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_13255 a1608bed21c02ee0ce3b4d78a465df6e 346 SUPERFAMILY SSF53474 56 329 4.59E-47 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_13255 a1608bed21c02ee0ce3b4d78a465df6e 346 Pfam PF00561 alpha/beta hydrolase fold 81 316 4.1E-20 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_08915 9c377e11c926f5869796c97dd4997fc9 252 Pfam PF02654 Cobalamin-5-phosphate synthase 7 237 3.4E-52 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDG60_08915 9c377e11c926f5869796c97dd4997fc9 252 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 252 42.391 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDG60_08915 9c377e11c926f5869796c97dd4997fc9 252 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 7 238 7.3E-37 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDG60_11585 6afb51edc01cdf7c1401923ca0492024 185 SUPERFAMILY SSF52540 5 170 3.77E-20 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_11585 6afb51edc01cdf7c1401923ca0492024 185 Gene3D G3DSA:3.40.50.300 3 183 1.2E-17 T 23-10-2018 CDG60_11585 6afb51edc01cdf7c1401923ca0492024 185 Pfam PF03029 Conserved hypothetical ATP binding protein 29 140 3.0E-5 T 23-10-2018 IPR004130 GPN-loop GTPase CDG60_14640 182ec7ffb1ca737ef7b1766c69950490 120 SUPERFAMILY SSF48371 27 76 2.22E-5 T 23-10-2018 IPR016024 Armadillo-type fold CDG60_14640 182ec7ffb1ca737ef7b1766c69950490 120 Gene3D G3DSA:1.25.10.10 4 106 4.8E-8 T 23-10-2018 IPR011989 Armadillo-like helical CDG60_17530 d7fccb8b7aac3c09099dd801cc4f38cc 439 Pfam PF04286 Protein of unknown function (DUF445) 58 432 4.2E-70 T 23-10-2018 IPR007383 Protein of unknown function DUF445 CDG60_08505 06678914aa3ed518f1dce50ab00b1e25 94 SUPERFAMILY SSF75169 6 92 1.84E-7 T 23-10-2018 IPR027396 DsrEFH-like CDG60_08505 06678914aa3ed518f1dce50ab00b1e25 94 Pfam PF04077 DsrH like protein 18 89 8.0E-7 T 23-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CDG60_08505 06678914aa3ed518f1dce50ab00b1e25 94 Gene3D G3DSA:3.40.1260.10 5 93 5.7E-7 T 23-10-2018 IPR027396 DsrEFH-like CDG60_15560 6a9fbb8ff26a22240f97747b2697082c 153 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 136 4.6E-11 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_15560 6a9fbb8ff26a22240f97747b2697082c 153 Gene3D G3DSA:2.40.128.520 26 153 1.3E-7 T 23-10-2018 CDG60_14820 dc377bec130d7b787def50f3c75a39f2 110 Gene3D G3DSA:3.30.160.100 1 106 2.8E-26 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG60_14820 dc377bec130d7b787def50f3c75a39f2 110 SUPERFAMILY SSF69754 1 100 3.4E-23 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG60_14820 dc377bec130d7b787def50f3c75a39f2 110 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 100 1.0E-17 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDG60_14820 dc377bec130d7b787def50f3c75a39f2 110 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 4.0E-22 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDG60_02830 6fff46a1db473ca08fb4ea9ac76369cf 420 SUPERFAMILY SSF53474 67 192 3.04E-6 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_10225 b4cea7043f8a6ef11472c428ccdfeeb2 274 Pfam PF01148 Cytidylyltransferase family 3 266 6.2E-60 T 23-10-2018 CDG60_10225 b4cea7043f8a6ef11472c428ccdfeeb2 274 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 23-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CDG60_11845 fcee30976faf0ebe851d41dbd3a6a5fa 984 Gene3D G3DSA:1.25.40.10 815 939 1.2E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_01670 87a35601aef4d610f15b0a9b1cc093eb 381 SUPERFAMILY SSF102405 90 295 2.14E-41 T 23-10-2018 CDG60_01670 87a35601aef4d610f15b0a9b1cc093eb 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 80 295 1.5E-68 T 23-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CDG60_01670 87a35601aef4d610f15b0a9b1cc093eb 381 Gene3D G3DSA:3.40.50.450 4 297 1.6E-87 T 23-10-2018 CDG60_01670 87a35601aef4d610f15b0a9b1cc093eb 381 Pfam PF02481 DNA recombination-mediator protein A 87 285 1.6E-71 T 23-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CDG60_13020 e79999f2393dfa976f19989825511a7e 620 Gene3D G3DSA:3.20.20.140 63 493 4.5E-91 T 23-10-2018 CDG60_13020 e79999f2393dfa976f19989825511a7e 620 SUPERFAMILY SSF51338 6 536 1.26E-19 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_13020 e79999f2393dfa976f19989825511a7e 620 Gene3D G3DSA:3.10.310.70 82 193 4.5E-91 T 23-10-2018 CDG60_13020 e79999f2393dfa976f19989825511a7e 620 Gene3D G3DSA:2.30.40.10 10 509 4.5E-91 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG60_13020 e79999f2393dfa976f19989825511a7e 620 SUPERFAMILY SSF51556 62 493 3.94E-42 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_13020 e79999f2393dfa976f19989825511a7e 620 Pfam PF07969 Amidohydrolase family 51 534 4.9E-113 T 23-10-2018 IPR013108 Amidohydrolase 3 CDG60_13765 a53beaba845413005cec6ee41f4c3fda 182 SUPERFAMILY SSF48498 80 182 2.98E-13 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_13765 a53beaba845413005cec6ee41f4c3fda 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 5.9E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13765 a53beaba845413005cec6ee41f4c3fda 182 Gene3D G3DSA:1.10.357.10 2 182 1.4E-29 T 23-10-2018 CDG60_13765 a53beaba845413005cec6ee41f4c3fda 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 7.8E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13765 a53beaba845413005cec6ee41f4c3fda 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.8E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_13765 a53beaba845413005cec6ee41f4c3fda 182 SUPERFAMILY SSF46689 3 77 7.48E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_14815 7a0108b977605cea3e35ca7fc78bd1b4 83 Pfam PF01722 BolA-like protein 21 74 1.1E-11 T 23-10-2018 IPR002634 BolA protein CDG60_14815 7a0108b977605cea3e35ca7fc78bd1b4 83 SUPERFAMILY SSF82657 2 78 6.15E-23 T 23-10-2018 IPR036065 BolA-like superfamily CDG60_14815 7a0108b977605cea3e35ca7fc78bd1b4 83 PIRSF PIRSF003113 1 82 4.9E-20 T 23-10-2018 IPR002634 BolA protein CDG60_14815 7a0108b977605cea3e35ca7fc78bd1b4 83 Gene3D G3DSA:3.30.300.90 1 82 5.4E-25 T 23-10-2018 CDG60_12095 051848b106a0453fe201374359c099db 373 PIRSF PIRSF026508 4 373 5.0E-113 T 23-10-2018 IPR008863 Toxic anion resistance CDG60_12095 051848b106a0453fe201374359c099db 373 Pfam PF05816 Toxic anion resistance protein (TelA) 44 365 1.1E-81 T 23-10-2018 IPR008863 Toxic anion resistance CDG60_05005 2de4c0fe5cb4a4fd3dd374f90f09b805 157 SMART SM00257 107 156 1.5E-12 T 23-10-2018 IPR018392 LysM domain CDG60_05005 2de4c0fe5cb4a4fd3dd374f90f09b805 157 Gene3D G3DSA:3.10.350.10 107 155 7.0E-14 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_05005 2de4c0fe5cb4a4fd3dd374f90f09b805 157 Pfam PF01476 LysM domain 108 156 2.4E-11 T 23-10-2018 IPR018392 LysM domain CDG60_05005 2de4c0fe5cb4a4fd3dd374f90f09b805 157 Pfam PF04972 BON domain 34 99 7.2E-9 T 23-10-2018 IPR007055 BON domain CDG60_05005 2de4c0fe5cb4a4fd3dd374f90f09b805 157 SUPERFAMILY SSF54106 106 156 1.44E-7 T 23-10-2018 CDG60_17170 28041920f6e57280c2b00ca9b3bfbb45 274 Pfam PF07661 MORN repeat variant 201 220 0.072 T 23-10-2018 IPR011652 MORN variant CDG60_17170 28041920f6e57280c2b00ca9b3bfbb45 274 Pfam PF07661 MORN repeat variant 153 173 0.0041 T 23-10-2018 IPR011652 MORN variant CDG60_17170 28041920f6e57280c2b00ca9b3bfbb45 274 Pfam PF07661 MORN repeat variant 224 244 0.068 T 23-10-2018 IPR011652 MORN variant CDG60_17170 28041920f6e57280c2b00ca9b3bfbb45 274 Pfam PF07661 MORN repeat variant 106 124 0.0026 T 23-10-2018 IPR011652 MORN variant CDG60_17170 28041920f6e57280c2b00ca9b3bfbb45 274 SUPERFAMILY SSF82185 149 248 1.7E-18 T 23-10-2018 CDG60_17170 28041920f6e57280c2b00ca9b3bfbb45 274 Gene3D G3DSA:3.90.930.1 192 268 8.9E-7 T 23-10-2018 CDG60_17170 28041920f6e57280c2b00ca9b3bfbb45 274 Gene3D G3DSA:3.90.930.1 97 191 2.5E-13 T 23-10-2018 CDG60_04110 2ff51fef10921143d26cfe9de554611f 166 Pfam PF13689 Domain of unknown function (DUF4154) 32 163 9.2E-23 T 23-10-2018 IPR025293 YfiR-like CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-16 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-16 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-16 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 SUPERFAMILY SSF54999 5 101 1.96E-36 T 23-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-44 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 SMART SM01403 7 101 1.4E-54 T 23-10-2018 IPR027486 Ribosomal protein S10 domain CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.3E-35 T 23-10-2018 IPR027486 Ribosomal protein S10 domain CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.156 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG60_15995 3f99a10d4b2410103bb2630cdb18871d 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-36 T 23-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CDG60_13540 0217de2b892d8743cc25aadc1e5a68bc 266 Gene3D G3DSA:3.40.50.620 88 241 8.2E-8 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG60_13540 0217de2b892d8743cc25aadc1e5a68bc 266 Pfam PF02698 DUF218 domain 110 255 8.6E-28 T 23-10-2018 IPR003848 Domain of unknown function DUF218 CDG60_12465 5042912256063a494792e86fbb1f214d 262 Pfam PF03591 AzlC protein 31 168 7.0E-31 T 23-10-2018 IPR011606 Branched-chain amino acid transport, permease CDG60_01335 7c0c172f326f84ea58c044dbf6fad3be 273 SUPERFAMILY SSF46785 167 260 1.09E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_01335 7c0c172f326f84ea58c044dbf6fad3be 273 Pfam PF08722 TnsA endonuclease N terminal 75 163 5.0E-28 T 23-10-2018 IPR014833 TnsA endonuclease, N-terminal CDG60_01335 7c0c172f326f84ea58c044dbf6fad3be 273 Gene3D G3DSA:3.40.1350.10 7 166 3.4E-65 T 23-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CDG60_01335 7c0c172f326f84ea58c044dbf6fad3be 273 Gene3D G3DSA:1.10.10.10 167 265 2.0E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_01335 7c0c172f326f84ea58c044dbf6fad3be 273 Pfam PF08721 TnsA endonuclease C terminal 166 244 2.4E-15 T 23-10-2018 IPR014832 TnsA endonuclease C-terminal CDG60_01335 7c0c172f326f84ea58c044dbf6fad3be 273 SUPERFAMILY SSF52980 9 166 1.02E-57 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG60_00225 66abace228f795dab93b62b4e481b32e 361 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 107 321 5.9E-20 T 23-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 CDG60_00535 c8d86b9ba288b27f5df6f782f3d559a2 103 Gene3D G3DSA:3.10.450.530 1 91 3.3E-22 T 23-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily CDG60_00535 c8d86b9ba288b27f5df6f782f3d559a2 103 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 88 1.9E-26 T 23-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CDG60_16130 3cceffe2724c1e41d51b5a282c3cae4b 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 2.9E-85 T 23-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDG60_16130 3cceffe2724c1e41d51b5a282c3cae4b 259 Pfam PF02405 Permease MlaE 41 253 1.5E-69 T 23-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 CDG60_03865 4f96da092fd1a7495673f1875dfe561b 487 SUPERFAMILY SSF56024 304 444 3.34E-18 T 23-10-2018 CDG60_03865 4f96da092fd1a7495673f1875dfe561b 487 SUPERFAMILY SSF56024 76 266 3.45E-15 T 23-10-2018 CDG60_03865 4f96da092fd1a7495673f1875dfe561b 487 Pfam PF13091 PLD-like domain 312 450 5.3E-21 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG60_03865 4f96da092fd1a7495673f1875dfe561b 487 Gene3D G3DSA:3.30.870.10 282 454 8.0E-25 T 23-10-2018 CDG60_01130 a086befd17baa8048f49275db63bb3a8 624 SUPERFAMILY SSF53335 117 338 3.99E-15 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_01130 a086befd17baa8048f49275db63bb3a8 624 Gene3D G3DSA:3.40.50.720 145 267 4.7E-27 T 23-10-2018 CDG60_01130 a086befd17baa8048f49275db63bb3a8 624 Pfam PF13727 CoA-binding domain 70 217 6.2E-6 T 23-10-2018 CDG60_01130 a086befd17baa8048f49275db63bb3a8 624 SUPERFAMILY SSF51735 283 554 2.63E-51 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_01130 a086befd17baa8048f49275db63bb3a8 624 Pfam PF02719 Polysaccharide biosynthesis protein 286 573 3.9E-124 T 23-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CDG60_01130 a086befd17baa8048f49275db63bb3a8 624 Gene3D G3DSA:3.40.50.720 281 616 6.0E-115 T 23-10-2018 CDG60_06545 b2d2d15f1fb6adce37d7492259047238 302 SUPERFAMILY SSF103481 189 288 3.01E-12 T 23-10-2018 CDG60_06545 b2d2d15f1fb6adce37d7492259047238 302 Pfam PF00892 EamA-like transporter family 149 285 2.3E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_06545 b2d2d15f1fb6adce37d7492259047238 302 Pfam PF00892 EamA-like transporter family 9 137 7.3E-9 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_06545 b2d2d15f1fb6adce37d7492259047238 302 SUPERFAMILY SSF103481 40 141 1.57E-12 T 23-10-2018 CDG60_09015 263249a58869d105f956b1d09c827135 139 Pfam PF04143 Sulphur transport 35 131 2.3E-6 T 23-10-2018 IPR007272 Sulphur transport domain CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 427 1.1E-76 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 SUPERFAMILY SSF103473 8 461 1.96E-64 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 Gene3D G3DSA:1.20.1250.20 256 460 2.4E-17 T 23-10-2018 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 Pfam PF07690 Major Facilitator Superfamily 22 412 2.6E-49 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 Gene3D G3DSA:1.20.1720.10 16 213 1.9E-46 T 23-10-2018 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 2.1E-9 T 23-10-2018 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 2.1E-9 T 23-10-2018 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 2.1E-9 T 23-10-2018 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 2.1E-9 T 23-10-2018 CDG60_01815 abb9af102f4deb7350fd7049ca1aefbb 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 2.1E-9 T 23-10-2018 CDG60_10985 95dab7cf4c9cc6dd2c0ccb1df17ba366 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 369 25.93 T 23-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CDG60_10985 95dab7cf4c9cc6dd2c0ccb1df17ba366 388 PIRSF PIRSF001549 319 378 27.0 T 23-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CDG60_10985 95dab7cf4c9cc6dd2c0ccb1df17ba366 388 PIRSF PIRSF001549 6 361 1.2E-37 T 23-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CDG60_10985 95dab7cf4c9cc6dd2c0ccb1df17ba366 388 Gene3D G3DSA:3.30.930.10 5 333 2.9E-59 T 23-10-2018 CDG60_10985 95dab7cf4c9cc6dd2c0ccb1df17ba366 388 Pfam PF13393 Histidyl-tRNA synthetase 12 321 6.7E-99 T 23-10-2018 CDG60_10985 95dab7cf4c9cc6dd2c0ccb1df17ba366 388 SUPERFAMILY SSF55681 7 319 3.73E-51 T 23-10-2018 CDG60_01405 9e9e6e9ce7849e5f7da5cff5151142a9 211 Pfam PF09335 SNARE associated Golgi protein 45 170 5.6E-23 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG60_03935 1cda12de3056d627d5f28173f855d33a 208 SUPERFAMILY SSF141523 67 207 7.46E-22 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG60_03935 1cda12de3056d627d5f28173f855d33a 208 Gene3D G3DSA:2.40.440.10 61 207 9.5E-14 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG60_03935 1cda12de3056d627d5f28173f855d33a 208 Pfam PF03734 L,D-transpeptidase catalytic domain 68 206 4.3E-15 T 23-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDG60_02120 95de4250a734c2707aa01e94acd04863 89 PIRSF PIRSF029827 1 89 2.9E-36 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG60_02120 95de4250a734c2707aa01e94acd04863 89 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 7.0E-33 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG60_02120 95de4250a734c2707aa01e94acd04863 89 Gene3D G3DSA:1.10.3880.10 1 89 1.9E-32 T 23-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CDG60_02120 95de4250a734c2707aa01e94acd04863 89 SUPERFAMILY SSF111148 1 84 1.7E-34 T 23-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CDG60_02120 95de4250a734c2707aa01e94acd04863 89 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.8E-37 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG60_02120 95de4250a734c2707aa01e94acd04863 89 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 25.341 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG60_06995 cc9545360b4b095ef82eb87b764f8b8c 289 SUPERFAMILY SSF103481 173 273 3.4E-12 T 23-10-2018 CDG60_06995 cc9545360b4b095ef82eb87b764f8b8c 289 Pfam PF00892 EamA-like transporter family 142 269 4.6E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_06995 cc9545360b4b095ef82eb87b764f8b8c 289 SUPERFAMILY SSF103481 44 133 5.89E-7 T 23-10-2018 CDG60_07990 da9b62ad83119e74bc30a4bfc8e845a4 349 Pfam PF00248 Aldo/keto reductase family 15 318 4.3E-69 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain CDG60_07990 da9b62ad83119e74bc30a4bfc8e845a4 349 SUPERFAMILY SSF51430 1 319 3.27E-95 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG60_07990 da9b62ad83119e74bc30a4bfc8e845a4 349 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_07990 da9b62ad83119e74bc30a4bfc8e845a4 349 PRINTS PR00069 Aldo-keto reductase signature 48 72 3.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_07990 da9b62ad83119e74bc30a4bfc8e845a4 349 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_07990 da9b62ad83119e74bc30a4bfc8e845a4 349 Gene3D G3DSA:3.20.20.100 1 343 9.9E-128 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG60_04315 12b964458953ce1536b86bd484fc8d57 421 Gene3D G3DSA:2.40.160.180 30 421 8.4E-129 T 23-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDG60_04315 12b964458953ce1536b86bd484fc8d57 421 Pfam PF04966 Carbohydrate-selective porin, OprB family 75 421 1.9E-90 T 23-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CDG60_16355 5924681129618b90d9558db73817e24f 480 Pfam PF14253 Bacteriophage abortive infection AbiH 3 415 8.1E-25 T 23-10-2018 IPR025935 Bacteriophage abortive infection AbiH CDG60_02585 121db7bca6cab8525a1a9624408f35a7 452 SUPERFAMILY SSF52540 1 370 1.62E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02585 121db7bca6cab8525a1a9624408f35a7 452 Pfam PF13476 AAA domain 5 259 6.1E-13 T 23-10-2018 IPR038729 Rad50/SbcC-type AAA domain CDG60_02585 121db7bca6cab8525a1a9624408f35a7 452 Gene3D G3DSA:3.40.50.300 1 381 7.6E-17 T 23-10-2018 CDG60_02665 4f42b7195ac3e6530a144bc34c6c0c8c 432 SUPERFAMILY SSF56601 34 384 7.35E-70 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_02665 4f42b7195ac3e6530a144bc34c6c0c8c 432 Gene3D G3DSA:3.40.710.30 32 408 5.9E-77 T 23-10-2018 CDG60_02665 4f42b7195ac3e6530a144bc34c6c0c8c 432 Pfam PF00144 Beta-lactamase 46 385 3.7E-53 T 23-10-2018 IPR001466 Beta-lactamase-related CDG60_17060 980d073a8192fe4f422f38ab52afa420 282 SUPERFAMILY SSF53335 32 279 4.67E-26 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_17060 980d073a8192fe4f422f38ab52afa420 282 Gene3D G3DSA:3.40.50.150 21 280 3.0E-21 T 23-10-2018 CDG60_17060 980d073a8192fe4f422f38ab52afa420 282 Pfam PF02353 Mycolic acid cyclopropane synthetase 36 178 2.4E-8 T 23-10-2018 CDG60_11595 cb8f9e9904600496cd4fe022c4a34727 233 Pfam PF01988 VIT family 18 225 9.3E-53 T 23-10-2018 IPR008217 Ccc1 family CDG60_01355 c07d9b1333c3e1909a59b0439424068d 149 Pfam PF01029 NusB family 13 137 5.5E-28 T 23-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CDG60_01355 c07d9b1333c3e1909a59b0439424068d 149 Gene3D G3DSA:1.10.940.10 6 145 6.7E-44 T 23-10-2018 IPR035926 NusB-like superfamily CDG60_01355 c07d9b1333c3e1909a59b0439424068d 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 139 1.2E-37 T 23-10-2018 IPR011605 NusB antitermination factor GO:0006353 CDG60_01355 c07d9b1333c3e1909a59b0439424068d 149 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 141 20.672 T 23-10-2018 IPR011605 NusB antitermination factor GO:0006353 CDG60_01355 c07d9b1333c3e1909a59b0439424068d 149 SUPERFAMILY SSF48013 10 141 3.14E-36 T 23-10-2018 IPR035926 NusB-like superfamily CDG60_13265 ab3a4c4f53a0a7b9cb3971763f144fe6 431 Gene3D G3DSA:3.40.50.150 18 203 1.1E-22 T 23-10-2018 CDG60_13265 ab3a4c4f53a0a7b9cb3971763f144fe6 431 SUPERFAMILY SSF53335 20 172 5.58E-26 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_13265 ab3a4c4f53a0a7b9cb3971763f144fe6 431 Pfam PF10119 Predicted methyltransferase regulatory domain 219 301 1.7E-18 T 23-10-2018 IPR018773 Methyltransferase regulatory domain, predicted CDG60_13265 ab3a4c4f53a0a7b9cb3971763f144fe6 431 Pfam PF13847 Methyltransferase domain 43 178 5.3E-19 T 23-10-2018 IPR025714 Methyltransferase domain CDG60_13685 e10de33bbfbc7078f2cfbd5b9a413a5a 189 Gene3D G3DSA:2.70.40.10 1 161 4.5E-55 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG60_13685 e10de33bbfbc7078f2cfbd5b9a413a5a 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 28.958 T 23-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CDG60_13685 e10de33bbfbc7078f2cfbd5b9a413a5a 189 Pfam PF00692 dUTPase 81 184 1.3E-8 T 23-10-2018 IPR029054 dUTPase-like CDG60_13685 e10de33bbfbc7078f2cfbd5b9a413a5a 189 SUPERFAMILY SSF51283 3 188 7.72E-55 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG60_13685 e10de33bbfbc7078f2cfbd5b9a413a5a 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 2.0E-51 T 23-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CDG60_07930 a89aa8031ae9977462a4c0f789770bd2 127 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 13 126 4.4E-50 T 23-10-2018 IPR018714 Protein of unknown function DUF2237 CDG60_07930 a89aa8031ae9977462a4c0f789770bd2 127 Gene3D G3DSA:3.30.56.110 8 127 8.4E-50 T 23-10-2018 CDG60_00790 a3e05826caa31e675511d9036ed848d5 335 Gene3D G3DSA:3.40.190.170 55 242 5.0E-11 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG60_04450 12d44a1d6c93d43c0cea7e226db39eef 105 Gene3D G3DSA:1.10.3730.20 1 105 7.5E-33 T 23-10-2018 CDG60_04450 12d44a1d6c93d43c0cea7e226db39eef 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 8.7E-31 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG60_04450 12d44a1d6c93d43c0cea7e226db39eef 105 SUPERFAMILY SSF103481 6 104 8.5E-22 T 23-10-2018 CDG60_02285 a653700eeccbfdcef9dac26aa5d793f6 470 Pfam PF13726 Na+-H+ antiporter family 2 88 1.1E-32 T 23-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal CDG60_02285 a653700eeccbfdcef9dac26aa5d793f6 470 Pfam PF03553 Na+/H+ antiporter family 150 464 6.5E-67 T 23-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CDG60_02285 a653700eeccbfdcef9dac26aa5d793f6 470 PRINTS PR00173 Glutamate-aspartate symporter signature 403 422 2.2E-5 T 23-10-2018 CDG60_02285 a653700eeccbfdcef9dac26aa5d793f6 470 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.2E-5 T 23-10-2018 CDG60_03350 5edf6d121fc573b651cdc963daaf6fd3 133 Gene3D G3DSA:3.30.420.270 61 130 1.1E-13 T 23-10-2018 CDG60_03350 5edf6d121fc573b651cdc963daaf6fd3 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 132 8.1E-28 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG60_11885 f6eaad1a02cb40c965a9550c7b038b80 153 Gene3D G3DSA:1.20.1260.50 1 150 3.3E-50 T 23-10-2018 CDG60_04780 b8563c925ea3e0bc469fed912cb81441 122 SUPERFAMILY SSF55331 2 119 2.14E-27 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG60_04780 b8563c925ea3e0bc469fed912cb81441 122 Gene3D G3DSA:3.30.429.10 1 122 1.8E-34 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG60_04780 b8563c925ea3e0bc469fed912cb81441 122 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 110 8.5E-9 T 23-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 CDG60_02825 8d35827dbef036033712d2dd9205f2cd 272 Gene3D G3DSA:3.40.50.150 25 255 5.8E-33 T 23-10-2018 CDG60_02825 8d35827dbef036033712d2dd9205f2cd 272 Pfam PF08241 Methyltransferase domain 62 150 3.4E-15 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG60_02825 8d35827dbef036033712d2dd9205f2cd 272 SUPERFAMILY SSF53335 17 179 4.95E-28 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_01545 b4645aa2bc645d9b80669e4c715b5a91 279 Gene3D G3DSA:3.40.50.1980 22 172 2.7E-22 T 23-10-2018 CDG60_01545 b4645aa2bc645d9b80669e4c715b5a91 279 Gene3D G3DSA:3.40.50.1980 173 275 8.0E-8 T 23-10-2018 CDG60_01545 b4645aa2bc645d9b80669e4c715b5a91 279 SUPERFAMILY SSF53807 15 273 4.61E-37 T 23-10-2018 CDG60_01545 b4645aa2bc645d9b80669e4c715b5a91 279 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 214 5.6E-22 T 23-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CDG60_00380 90bc415bb0f72a2cdc6a1185f12cee5a 570 Pfam PF06414 Zeta toxin 32 210 1.0E-47 T 23-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 CDG60_00380 90bc415bb0f72a2cdc6a1185f12cee5a 570 Gene3D G3DSA:3.40.50.300 1 275 2.6E-62 T 23-10-2018 CDG60_00380 90bc415bb0f72a2cdc6a1185f12cee5a 570 SUPERFAMILY SSF52540 25 191 9.35E-9 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_09720 184814cd01ee79cec68006157b22a2a7 374 Pfam PF04233 Phage Mu protein F like protein 157 260 1.5E-10 T 23-10-2018 IPR006528 Phage head morphogenesis domain CDG60_09720 184814cd01ee79cec68006157b22a2a7 374 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 159 271 9.2E-14 T 23-10-2018 IPR006528 Phage head morphogenesis domain CDG60_14010 a4f11b3a180d0348f9948620f6910642 188 PIRSF PIRSF006305 1 187 1.7E-54 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_14010 a4f11b3a180d0348f9948620f6910642 188 Gene3D G3DSA:3.90.950.10 1 187 1.0E-70 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG60_14010 a4f11b3a180d0348f9948620f6910642 188 SUPERFAMILY SSF52972 2 182 7.19E-63 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG60_14010 a4f11b3a180d0348f9948620f6910642 188 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 31.561 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_14010 a4f11b3a180d0348f9948620f6910642 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 1.1E-53 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_14010 a4f11b3a180d0348f9948620f6910642 188 Pfam PF02545 Maf-like protein 3 183 2.2E-58 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_04660 b45a6c74b0477e862621a6b5f42f0d12 361 SUPERFAMILY SSF161070 40 355 3.01E-9 T 23-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 CDG60_09595 9541a92d8d246db44c98c1a5ec3f31a4 195 Pfam PF11860 N-acetylmuramidase 20 192 3.5E-57 T 23-10-2018 IPR024408 N-acetylmuramidase CDG60_12300 bc6b2989f7eebe02713aafe6d95882ae 211 Pfam PF04586 Caudovirus prohead serine protease 47 152 2.5E-6 T 23-10-2018 IPR006433 Prohead protease CDG60_12695 09c6f3050d5cb427df41219fcb706ca6 166 Gene3D G3DSA:2.40.128.270 43 164 5.9E-8 T 23-10-2018 IPR038670 HslJ-like superfamily CDG60_12695 09c6f3050d5cb427df41219fcb706ca6 166 Pfam PF03724 META domain 51 155 9.0E-7 T 23-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CDG60_03955 2e7f9447d49c6ed9095b63bd49cb350c 109 Gene3D G3DSA:2.60.120.10 16 109 1.9E-5 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_03955 2e7f9447d49c6ed9095b63bd49cb350c 109 SUPERFAMILY SSF51182 28 101 4.86E-9 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_00305 cd2d1209a9270f51ce0e1847b46fec80 259 Pfam PF01636 Phosphotransferase enzyme family 27 242 1.6E-14 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG60_00305 cd2d1209a9270f51ce0e1847b46fec80 259 Gene3D G3DSA:3.30.200.20 1 87 9.0E-24 T 23-10-2018 CDG60_00305 cd2d1209a9270f51ce0e1847b46fec80 259 SUPERFAMILY SSF56112 2 248 5.39E-35 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_00305 cd2d1209a9270f51ce0e1847b46fec80 259 Gene3D G3DSA:3.90.1200.10 95 259 5.8E-32 T 23-10-2018 CDG60_00305 cd2d1209a9270f51ce0e1847b46fec80 259 PIRSF PIRSF000706 1 259 5.6E-76 T 23-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 CDG60_05690 db0e2d238dcc091a66b70cf6441b96f1 238 SUPERFAMILY SSF53448 2 235 7.84E-25 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_05690 db0e2d238dcc091a66b70cf6441b96f1 238 PIRSF PIRSF028162 1 235 3.0E-84 T 23-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted CDG60_05690 db0e2d238dcc091a66b70cf6441b96f1 238 Gene3D G3DSA:3.90.550.10 1 235 3.8E-52 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_12240 8d71fdcc098a4ad46b4cce5c696e1980 159 Pfam PF16460 Phage tail tube, TTP, lambda-like 27 120 5.2E-12 T 23-10-2018 IPR032495 Phage tail tube protein, lambda-like CDG60_06665 e7f6cf9be0f87c1ac2bb5183166937b7 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 205 1.6E-38 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG60_06665 e7f6cf9be0f87c1ac2bb5183166937b7 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 227 38.584 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG60_06665 e7f6cf9be0f87c1ac2bb5183166937b7 232 TIGRFAM TIGR02796 tolQ: protein TolQ 11 222 1.8E-81 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG60_12505 a06230965d7d926fcc90f8c033b3dea8 370 Pfam PF03922 OmpW family 132 369 3.6E-14 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG60_12505 a06230965d7d926fcc90f8c033b3dea8 370 SUPERFAMILY SSF56925 125 369 2.88E-13 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_12505 a06230965d7d926fcc90f8c033b3dea8 370 Gene3D G3DSA:2.40.160.20 108 370 3.9E-51 T 23-10-2018 CDG60_09355 f3c4eb2f2ee458034705cbfe6da30b2e 213 SUPERFAMILY SSF53335 24 208 1.24E-24 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_09355 f3c4eb2f2ee458034705cbfe6da30b2e 213 Gene3D G3DSA:3.40.50.150 22 213 9.5E-26 T 23-10-2018 CDG60_09355 f3c4eb2f2ee458034705cbfe6da30b2e 213 Pfam PF13847 Methyltransferase domain 54 178 5.8E-12 T 23-10-2018 IPR025714 Methyltransferase domain CDG60_16005 739ddac08a8f3afe68f42e1415100b5a 394 Gene3D G3DSA:3.90.1150.10 259 394 3.0E-29 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG60_16005 739ddac08a8f3afe68f42e1415100b5a 394 Gene3D G3DSA:3.40.640.10 1 256 2.7E-51 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_16005 739ddac08a8f3afe68f42e1415100b5a 394 PIRSF PIRSF001434 1 394 9.6E-96 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_16005 739ddac08a8f3afe68f42e1415100b5a 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 392 5.5E-73 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG60_16005 739ddac08a8f3afe68f42e1415100b5a 394 SUPERFAMILY SSF53383 25 392 1.38E-67 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_04145 d78c7c93b334e5bb64d6c93400877126 143 Pfam PF03259 Roadblock/LC7 domain 27 102 1.5E-6 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain CDG60_04145 d78c7c93b334e5bb64d6c93400877126 143 SMART SM00960 20 111 1.7E-4 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain CDG60_04145 d78c7c93b334e5bb64d6c93400877126 143 Gene3D G3DSA:3.30.450.30 19 139 4.6E-19 T 23-10-2018 CDG60_04145 d78c7c93b334e5bb64d6c93400877126 143 SUPERFAMILY SSF103196 15 138 4.53E-17 T 23-10-2018 CDG60_10105 f692677f92fa4b6b75c9d4a1681ec5ed 144 Gene3D G3DSA:3.30.428.10 1 135 7.2E-38 T 23-10-2018 IPR036265 HIT-like superfamily CDG60_10105 f692677f92fa4b6b75c9d4a1681ec5ed 144 Pfam PF01230 HIT domain 10 98 8.6E-12 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG60_10105 f692677f92fa4b6b75c9d4a1681ec5ed 144 PIRSF PIRSF000714 1 138 4.3E-47 T 23-10-2018 IPR026026 Histidine triad hydrolase, Hint-type CDG60_10105 f692677f92fa4b6b75c9d4a1681ec5ed 144 SUPERFAMILY SSF54197 1 131 7.44E-30 T 23-10-2018 IPR036265 HIT-like superfamily CDG60_14055 f05b4d1768a09cc4c6892fbe12de3cf6 363 Pfam PF16872 Putative phage abortive infection protein 228 316 3.9E-10 T 23-10-2018 IPR031709 Putative phage abortive infection protein CDG60_12905 c7788d78069a59fefedddfe74be0045b 897 Gene3D G3DSA:2.60.40.740 198 337 1.1E-9 T 23-10-2018 CDG60_12905 c7788d78069a59fefedddfe74be0045b 897 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 201 250 9.0E-9 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_12905 c7788d78069a59fefedddfe74be0045b 897 Pfam PF01345 Domain of unknown function DUF11 199 313 6.0E-9 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG60_09045 569c32464905b0952a0fae6401599633 712 Gene3D G3DSA:2.170.130.10 34 174 3.9E-18 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG60_09045 569c32464905b0952a0fae6401599633 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 162 9.3E-18 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG60_09045 569c32464905b0952a0fae6401599633 712 SUPERFAMILY SSF56935 45 710 1.43E-101 T 23-10-2018 CDG60_09045 569c32464905b0952a0fae6401599633 712 Pfam PF00593 TonB dependent receptor 241 711 1.9E-46 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG60_09045 569c32464905b0952a0fae6401599633 712 Gene3D G3DSA:2.40.170.20 181 711 1.9E-87 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG60_12310 5088e1a24ed32d0b80c873087134d4ef 560 Pfam PF03354 Phage Terminase 68 542 8.4E-25 T 23-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type CDG60_12310 5088e1a24ed32d0b80c873087134d4ef 560 Gene3D G3DSA:3.40.50.300 52 244 4.9E-15 T 23-10-2018 CDG60_03135 e4e1faa5e07c862c466d449c50a3f25c 80 Pfam PF09834 Predicted membrane protein (DUF2061) 17 66 4.6E-19 T 23-10-2018 IPR018638 Domain of unknown function DUF2061, membrane CDG60_05905 3a5b9dd42a0cbc2ff1009513cf485c0a 195 Pfam PF13430 Domain of unknown function (DUF4112) 22 121 4.9E-22 T 23-10-2018 IPR025187 Protein of unknown function DUF4112 CDG60_07925 66aa90995af11deb8c44e483aa912a22 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 8 194 1.2E-38 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_07925 66aa90995af11deb8c44e483aa912a22 201 Gene3D G3DSA:3.90.950.10 8 199 2.4E-46 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG60_07925 66aa90995af11deb8c44e483aa912a22 201 Hamap MF_00528 Septum formation protein Maf [maf]. 9 200 21.689 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_07925 66aa90995af11deb8c44e483aa912a22 201 Pfam PF02545 Maf-like protein 9 195 2.2E-35 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_07925 66aa90995af11deb8c44e483aa912a22 201 SUPERFAMILY SSF52972 7 195 2.22E-45 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG60_07925 66aa90995af11deb8c44e483aa912a22 201 PIRSF PIRSF006305 1 200 9.0E-38 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG60_07965 d1b9f2253e32247b3876844ebbbac06d 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 231 1.6E-68 T 23-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CDG60_07965 d1b9f2253e32247b3876844ebbbac06d 243 Gene3D G3DSA:3.60.21.10 1 236 4.1E-16 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG60_07965 d1b9f2253e32247b3876844ebbbac06d 243 Pfam PF00149 Calcineurin-like phosphoesterase 4 201 9.6E-8 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG60_07965 d1b9f2253e32247b3876844ebbbac06d 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 88.294 T 23-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CDG60_07965 d1b9f2253e32247b3876844ebbbac06d 243 SUPERFAMILY SSF56300 3 231 2.71E-28 T 23-10-2018 CDG60_11085 5f93dfb68a319a4372e4f0a9eebcba9c 440 PIRSF PIRSF005353 2 438 4.2E-183 T 23-10-2018 IPR026033 Purine permease PbuG-like CDG60_11085 5f93dfb68a319a4372e4f0a9eebcba9c 440 Pfam PF00860 Permease family 28 399 2.0E-56 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CDG60_06150 6299e5475482475db3417d8551fa0c3e 138 Gene3D G3DSA:2.160.20.20 11 136 1.2E-6 T 23-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily CDG60_04330 f61fb3b245917188cab268449ddf3dca 161 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 156 2.1E-31 T 23-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 CDG60_04330 f61fb3b245917188cab268449ddf3dca 161 PIRSF PIRSF030820 1 161 1.1E-33 T 23-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 CDG60_13595 17f87815dabbec07e47e39d9d05dcf63 124 PIRSF PIRSF016789 1 123 5.4E-27 T 23-10-2018 IPR007401 Protein of unknown function DUF454 CDG60_13595 17f87815dabbec07e47e39d9d05dcf63 124 Pfam PF04304 Protein of unknown function (DUF454) 4 117 1.2E-33 T 23-10-2018 IPR007401 Protein of unknown function DUF454 CDG60_02975 2b74e16fee895de1bfa945c43ef7f6cf 285 Pfam PF00561 alpha/beta hydrolase fold 40 141 3.8E-18 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_02975 2b74e16fee895de1bfa945c43ef7f6cf 285 Gene3D G3DSA:3.40.50.1820 18 284 1.2E-70 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_02975 2b74e16fee895de1bfa945c43ef7f6cf 285 SUPERFAMILY SSF53474 19 280 8.24E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_02975 2b74e16fee895de1bfa945c43ef7f6cf 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 5.4E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_02975 2b74e16fee895de1bfa945c43ef7f6cf 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 5.4E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_02975 2b74e16fee895de1bfa945c43ef7f6cf 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 226 240 5.4E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_02975 2b74e16fee895de1bfa945c43ef7f6cf 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 67 82 5.4E-14 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG60_03810 a6d46aeeb962edb8949b498beaf9c028 136 Pfam PF05523 WxcM-like, C-terminal 4 130 2.6E-50 T 23-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 CDG60_03810 a6d46aeeb962edb8949b498beaf9c028 136 Gene3D G3DSA:2.60.120.10 1 135 3.0E-49 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_03810 a6d46aeeb962edb8949b498beaf9c028 136 SUPERFAMILY SSF51182 4 131 1.01E-37 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_01010 08aeeb7a5025c342c8c838b24b22ebac 379 Pfam PF00487 Fatty acid desaturase 74 340 2.8E-29 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG60_14165 73930824ab0fc7bbee4800314f6078f9 141 Pfam PF07883 Cupin domain 50 103 4.2E-8 T 23-10-2018 IPR013096 Cupin 2, conserved barrel CDG60_14165 73930824ab0fc7bbee4800314f6078f9 141 SUPERFAMILY SSF51182 20 123 1.86E-17 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG60_14165 73930824ab0fc7bbee4800314f6078f9 141 Gene3D G3DSA:2.60.120.10 11 137 5.0E-18 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_16270 ff535f0ba20df95325ebcec38070d7cc 110 Gene3D G3DSA:3.20.160.10 1 110 2.0E-42 T 23-10-2018 IPR038604 Type III effector HopJ superfamily CDG60_16270 ff535f0ba20df95325ebcec38070d7cc 110 Pfam PF08888 HopJ type III effector protein 3 107 4.6E-40 T 23-10-2018 IPR014984 HopJ type III effector protein CDG60_11200 213769394fa11584f91ba60cdf29a273 291 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 4.0E-10 T 23-10-2018 IPR011723 Zinc finger/thioredoxin putative CDG60_11200 213769394fa11584f91ba60cdf29a273 291 Pfam PF11906 Protein of unknown function (DUF3426) 149 288 5.4E-10 T 23-10-2018 IPR021834 Protein of unknown function DUF3426 CDG60_10860 25a2affcc972a7e95bf557e6844f1ad7 356 Pfam PF03922 OmpW family 190 356 2.7E-14 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG60_10860 25a2affcc972a7e95bf557e6844f1ad7 356 SUPERFAMILY SSF56925 125 356 2.17E-17 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_10455 6363aa1676e3007faaaaf1c885322313 147 Pfam PF00583 Acetyltransferase (GNAT) family 32 133 6.4E-15 T 23-10-2018 IPR000182 GNAT domain CDG60_10455 6363aa1676e3007faaaaf1c885322313 147 Gene3D G3DSA:3.40.630.30 3 139 1.3E-32 T 23-10-2018 CDG60_10455 6363aa1676e3007faaaaf1c885322313 147 SUPERFAMILY SSF55729 1 141 2.19E-30 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_10500 fa6ce6987a78a33e6d8afc42ec8ce4ef 398 Pfam PF07690 Major Facilitator Superfamily 22 342 2.9E-33 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_10500 fa6ce6987a78a33e6d8afc42ec8ce4ef 398 Gene3D G3DSA:1.20.1250.20 208 397 7.1E-19 T 23-10-2018 CDG60_10500 fa6ce6987a78a33e6d8afc42ec8ce4ef 398 SUPERFAMILY SSF103473 10 389 2.22E-56 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_10500 fa6ce6987a78a33e6d8afc42ec8ce4ef 398 Gene3D G3DSA:1.20.1250.20 15 196 6.5E-25 T 23-10-2018 CDG60_04345 b71129cdd77b592b64c536be19779563 206 SUPERFAMILY SSF144091 6 189 4.71E-31 T 23-10-2018 CDG60_04345 b71129cdd77b592b64c536be19779563 206 Gene3D G3DSA:1.20.1540.10 4 191 1.2E-22 T 23-10-2018 IPR035952 Rhomboid-like superfamily CDG60_04345 b71129cdd77b592b64c536be19779563 206 Pfam PF01694 Rhomboid family 39 188 5.2E-22 T 23-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CDG60_06745 3d8e5c0479e2af6d25f14a37efb87f18 240 Pfam PF14355 Abortive infection C-terminus 163 238 1.1E-24 T 23-10-2018 IPR026001 Abortive infection protein-like, C-terminal domain CDG60_17235 250024cf1d5269adfd9cc307009b3a16 192 SUPERFAMILY SSF55961 42 163 4.4E-11 T 23-10-2018 CDG60_17235 250024cf1d5269adfd9cc307009b3a16 192 Gene3D G3DSA:3.30.530.20 41 192 2.2E-8 T 23-10-2018 IPR023393 START-like domain superfamily CDG60_08840 1216776bb9be56b68a120ad0e1fe641a 107 Gene3D G3DSA:3.90.960.10 1 106 2.0E-40 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG60_08840 1216776bb9be56b68a120ad0e1fe641a 107 Pfam PF04073 Aminoacyl-tRNA editing domain 3 95 1.6E-22 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDG60_08840 1216776bb9be56b68a120ad0e1fe641a 107 SUPERFAMILY SSF55826 4 104 2.75E-33 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG60_14445 40be36030666f2d1062489e8a2d2c8dd 253 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 253 9.8E-134 T 23-10-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 CDG60_14445 40be36030666f2d1062489e8a2d2c8dd 253 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 60 6.5E-23 T 23-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal CDG60_10750 b31878454026e6f93be4d73619d7109f 246 Pfam PF03591 AzlC protein 24 164 4.0E-33 T 23-10-2018 IPR011606 Branched-chain amino acid transport, permease CDG60_07780 dfa3357a9b91621c60fc8dfe0d2107d0 159 Pfam PF04612 Type II secretion system (T2SS), protein M 17 158 2.0E-13 T 23-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 CDG60_07780 dfa3357a9b91621c60fc8dfe0d2107d0 159 SUPERFAMILY SSF103054 91 158 5.49E-5 T 23-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily CDG60_17480 7f3ae66715e28148fd6e88d823ffc100 246 SUPERFAMILY SSF48452 24 112 1.49E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_07330 81202646998fbcb4b595b0831232a185 262 Pfam PF14237 Domain of unknown function (DUF4339) 4 46 3.3E-16 T 23-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 CDG60_07330 81202646998fbcb4b595b0831232a185 262 Pfam PF06271 RDD family 100 256 2.9E-19 T 23-10-2018 IPR010432 RDD CDG60_02570 b8e04c7f390bd6f7ff24f6eea0dbfac7 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 7.6E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02570 b8e04c7f390bd6f7ff24f6eea0dbfac7 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 7.6E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02570 b8e04c7f390bd6f7ff24f6eea0dbfac7 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 148 167 7.6E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02570 b8e04c7f390bd6f7ff24f6eea0dbfac7 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 7.6E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_02570 b8e04c7f390bd6f7ff24f6eea0dbfac7 602 Pfam PF00361 Proton-conducting membrane transporter 143 433 1.3E-39 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG60_03455 5964f8ff60d561b7d2aa7c1a8c2a0b21 222 Pfam PF01066 CDP-alcohol phosphatidyltransferase 35 108 9.5E-8 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG60_03455 5964f8ff60d561b7d2aa7c1a8c2a0b21 222 Gene3D G3DSA:1.20.120.1760 18 216 5.2E-27 T 23-10-2018 CDG60_09285 a8c3adef304d13c4cd8289312b97a80d 178 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 6 178 3.3E-52 T 23-10-2018 IPR018636 Protein of unknown function DUF2058 CDG60_15650 abad835f8460edeae686a5c061131deb 217 Pfam PF13391 HNH endonuclease 131 183 4.0E-7 T 23-10-2018 IPR003615 HNH nuclease CDG60_15650 abad835f8460edeae686a5c061131deb 217 SMART SM00507 118 176 3.5E-5 T 23-10-2018 IPR003615 HNH nuclease CDG60_07285 de9ef42d7e9bc55bac99cbd4dd2ff34b 302 Pfam PF01882 Protein of unknown function DUF58 200 275 2.8E-10 T 23-10-2018 IPR002881 Domain of unknown function DUF58 CDG60_01820 bad2d4a6b6ee838955d75919dc72ec22 597 Gene3D G3DSA:2.130.10.10 51 342 2.3E-13 T 23-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDG60_01820 bad2d4a6b6ee838955d75919dc72ec22 597 SUPERFAMILY SSF75011 66 588 1.27E-17 T 23-10-2018 CDG60_03260 cc52193fd17c86743fc36823639a7245 154 SUPERFAMILY SSF55811 10 141 7.18E-25 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG60_03260 cc52193fd17c86743fc36823639a7245 154 Gene3D G3DSA:3.90.79.10 9 141 4.4E-25 T 23-10-2018 CDG60_03260 cc52193fd17c86743fc36823639a7245 154 Pfam PF00293 NUDIX domain 11 126 1.8E-19 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG60_06625 69322699647cdb6395945cca445c7c30 204 SUPERFAMILY SSF88946 33 98 2.0E-6 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG60_06625 69322699647cdb6395945cca445c7c30 204 SUPERFAMILY SSF88659 105 194 3.36E-17 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG60_06625 69322699647cdb6395945cca445c7c30 204 Pfam PF08281 Sigma-70, region 4 136 185 5.9E-17 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG60_06625 69322699647cdb6395945cca445c7c30 204 Gene3D G3DSA:1.10.10.10 116 196 2.5E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_06625 69322699647cdb6395945cca445c7c30 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 192 4.9E-21 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG60_00350 c284243e9bbe665d8c16bad8c892eb90 509 Pfam PF14319 Transposase zinc-binding domain 51 149 1.0E-20 T 23-10-2018 IPR026889 Transposase zinc-binding domain CDG60_00350 c284243e9bbe665d8c16bad8c892eb90 509 Pfam PF04986 Putative transposase 179 403 2.6E-47 T 23-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CDG60_04150 ed4c98f80954805ebf5bb129dac68d36 180 SUPERFAMILY SSF52540 5 171 1.47E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_04150 ed4c98f80954805ebf5bb129dac68d36 180 Gene3D G3DSA:3.40.50.300 3 178 3.4E-19 T 23-10-2018 CDG60_04150 ed4c98f80954805ebf5bb129dac68d36 180 Pfam PF00071 Ras family 7 166 8.0E-6 T 23-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 CDG60_07660 e25ee52a35b52712ff87f5fb705b0c7c 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG60_07660 e25ee52a35b52712ff87f5fb705b0c7c 193 SUPERFAMILY SSF48498 100 162 7.11E-10 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG60_07660 e25ee52a35b52712ff87f5fb705b0c7c 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 7.9E-13 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_07660 e25ee52a35b52712ff87f5fb705b0c7c 193 SUPERFAMILY SSF46689 6 80 4.1E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_07660 e25ee52a35b52712ff87f5fb705b0c7c 193 Gene3D G3DSA:1.10.357.10 12 185 3.4E-32 T 23-10-2018 CDG60_07660 e25ee52a35b52712ff87f5fb705b0c7c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.3E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_07660 e25ee52a35b52712ff87f5fb705b0c7c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.3E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_02970 9d354e74f755599e8e9670e956e04fda 413 Gene3D G3DSA:2.40.160.10 24 413 3.1E-115 T 23-10-2018 IPR023614 Porin domain superfamily CDG60_02970 9d354e74f755599e8e9670e956e04fda 413 Pfam PF03573 outer membrane porin, OprD family 24 413 2.6E-96 T 23-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 CDG60_03415 7d05b13272ef6559a80e81fb2858f1d2 317 Gene3D G3DSA:3.90.640.20 210 303 1.6E-25 T 23-10-2018 IPR037126 PdaC/RsiV-like superfamily CDG60_03415 7d05b13272ef6559a80e81fb2858f1d2 317 Pfam PF11738 Protein of unknown function (DUF3298) 239 288 4.9E-10 T 23-10-2018 IPR021729 Domain of unknown function DUF3298 CDG60_12100 1bfcffff9fa0140bdb6a5c5260a8da5d 259 ProDom PD121987 PLASMID RESISTANT TELLURIUM KLAA KLAA/KILA MAINTENANCE RESISTANCE KILA TELLURITE 64 257 2.0E-58 T 23-10-2018 CDG60_11740 37bc6bb9433f1166c17b9efe57cdb8b0 358 Gene3D G3DSA:3.20.20.140 5 357 1.6E-75 T 23-10-2018 CDG60_11740 37bc6bb9433f1166c17b9efe57cdb8b0 358 Pfam PF04909 Amidohydrolase 138 354 6.3E-22 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG60_11740 37bc6bb9433f1166c17b9efe57cdb8b0 358 SUPERFAMILY SSF51556 9 355 3.83E-36 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG60_09795 b4c70d3e47fe556af2c24e2843c2fa4a 294 Gene3D G3DSA:1.10.10.10 9 93 4.5E-11 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09795 b4c70d3e47fe556af2c24e2843c2fa4a 294 Pfam PF04492 Bacteriophage replication protein O 14 80 3.8E-8 T 23-10-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 CDG60_07135 b0853f5cba4ea49b7d1aa0de322facff 210 Pfam PF09997 Predicted membrane protein (DUF2238) 42 191 4.4E-44 T 23-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 CDG60_08180 85952b8c8a6d9b514f4801d4ee8db65d 293 Pfam PF01925 Sulfite exporter TauE/SafE 7 265 2.4E-46 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_16985 f5b7c915bde49f09814df3bea3d77bef 205 Pfam PF01612 3'-5' exonuclease 29 197 1.2E-19 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG60_16985 f5b7c915bde49f09814df3bea3d77bef 205 SMART SM00474 28 199 1.4E-10 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG60_16985 f5b7c915bde49f09814df3bea3d77bef 205 SUPERFAMILY SSF53098 14 197 1.18E-36 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG60_16985 f5b7c915bde49f09814df3bea3d77bef 205 Gene3D G3DSA:3.30.420.10 20 198 3.9E-39 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG60_04975 1e832161e3d0270e5c802dd6a2b132d4 220 Pfam PF04315 Elongation factor P hydroxylase 53 214 2.4E-61 T 23-10-2018 IPR007411 Elongation factor P hydroxylase CDG60_08170 e96d192e87186cc52871923e8f6808bd 174 SUPERFAMILY SSF52799 11 135 2.08E-13 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG60_08170 e96d192e87186cc52871923e8f6808bd 174 Gene3D G3DSA:3.90.190.10 2 155 1.2E-31 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG60_16055 5038e5266f33cd2b507176a57ca30d1c 315 PIRSF PIRSF007580 7 310 3.8E-79 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_16055 5038e5266f33cd2b507176a57ca30d1c 315 Pfam PF10118 Predicted metal-dependent hydrolase 21 290 3.2E-64 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_13410 326e86422f00b83f16211f8d3285d26a 112 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 4.5E-33 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG60_13410 326e86422f00b83f16211f8d3285d26a 112 Gene3D G3DSA:3.10.50.40 1 112 2.0E-43 T 23-10-2018 CDG60_13410 326e86422f00b83f16211f8d3285d26a 112 SUPERFAMILY SSF54534 4 110 2.36E-40 T 23-10-2018 CDG60_00920 5ad4a8dd167cbab76dbe0b82eee97d16 380 Gene3D G3DSA:1.50.10.150 13 366 7.6E-20 T 23-10-2018 IPR038665 Voltage-dependent anion channel superfamily CDG60_00920 5ad4a8dd167cbab76dbe0b82eee97d16 380 Pfam PF03595 Voltage-dependent anion channel 17 355 3.0E-76 T 23-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CDG60_16120 4bdda117256ffb6c8abf59dbb68eb9e7 208 Pfam PF05494 MlaC protein 36 196 2.2E-41 T 23-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CDG60_16120 4bdda117256ffb6c8abf59dbb68eb9e7 208 Gene3D G3DSA:3.10.450.710 27 205 5.8E-49 T 23-10-2018 CDG60_16120 4bdda117256ffb6c8abf59dbb68eb9e7 208 PIRSF PIRSF004649 1 208 1.1E-58 T 23-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CDG60_15720 7a057e96b4c333dbc43b3fa477f19f14 350 Pfam PF13387 Domain of unknown function (DUF4105) 136 290 9.4E-43 T 23-10-2018 IPR025178 Domain of unknown function DUF4105 CDG60_13745 7b43160138c13b639811c003eb24a8ac 325 Gene3D G3DSA:3.60.15.10 35 325 1.2E-112 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_13745 7b43160138c13b639811c003eb24a8ac 325 Pfam PF00753 Metallo-beta-lactamase superfamily 90 277 1.4E-19 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_13745 7b43160138c13b639811c003eb24a8ac 325 SUPERFAMILY SSF56281 34 309 4.32E-46 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG60_13745 7b43160138c13b639811c003eb24a8ac 325 SMART SM00849 91 299 6.9E-25 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG60_16940 48b1231b64f81213a7aa3d554120d2dd 418 SUPERFAMILY SSF56935 26 418 1.53E-63 T 23-10-2018 CDG60_16940 48b1231b64f81213a7aa3d554120d2dd 418 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 40 418 3.3E-42 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG60_16940 48b1231b64f81213a7aa3d554120d2dd 418 Gene3D G3DSA:2.40.160.60 24 418 8.3E-92 T 23-10-2018 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 16 321 3.6E-116 T 23-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 Gene3D G3DSA:3.30.930.10 1 325 8.7E-91 T 23-10-2018 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 SUPERFAMILY SSF55681 14 321 1.11E-62 T 23-10-2018 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 208 224 2.5E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 79 92 2.5E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 97 114 2.5E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 2.5E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG60_12560 3c92eab6b7002c6d67259ed211764281 326 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 322 2.0E-39 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG60_05910 101b1c0804771f9b4e4e8687fdfb4739 113 Gene3D G3DSA:3.10.180.10 1 113 7.7E-32 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_05910 101b1c0804771f9b4e4e8687fdfb4739 113 SUPERFAMILY SSF54593 3 112 1.36E-15 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_02590 6992a9b979a79d943585ba01af4aaa01 500 Gene3D G3DSA:3.40.50.300 5 126 2.0E-8 T 23-10-2018 CDG60_02590 6992a9b979a79d943585ba01af4aaa01 500 Pfam PF13245 AAA domain 13 252 2.6E-13 T 23-10-2018 CDG60_02590 6992a9b979a79d943585ba01af4aaa01 500 Gene3D G3DSA:3.40.50.300 379 492 1.7E-12 T 23-10-2018 CDG60_02590 6992a9b979a79d943585ba01af4aaa01 500 Gene3D G3DSA:3.40.50.300 206 289 1.4E-10 T 23-10-2018 CDG60_02590 6992a9b979a79d943585ba01af4aaa01 500 SUPERFAMILY SSF52540 8 482 1.91E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_02590 6992a9b979a79d943585ba01af4aaa01 500 Pfam PF13361 UvrD-like helicase C-terminal domain 425 477 8.9E-11 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG60_00400 3125b7e88a1e344b4b4dac8b8633e543 903 SUPERFAMILY SSF52540 488 807 1.49E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_00400 3125b7e88a1e344b4b4dac8b8633e543 903 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 282 487 1.0E-21 T 23-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 CDG60_11520 b02ca0e6e5779db2c75f23324a084a05 227 Gene3D G3DSA:3.40.50.150 4 227 4.5E-40 T 23-10-2018 CDG60_11520 b02ca0e6e5779db2c75f23324a084a05 227 SUPERFAMILY SSF53335 8 226 1.41E-29 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_11520 b02ca0e6e5779db2c75f23324a084a05 227 Pfam PF13649 Methyltransferase domain 47 146 3.5E-16 T 23-10-2018 CDG60_05165 8165646bc2ebb55d3e4dd2fe6651c8c3 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 226 9.1E-20 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_05165 8165646bc2ebb55d3e4dd2fe6651c8c3 227 SUPERFAMILY SSF161098 16 211 2.62E-38 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_05165 8165646bc2ebb55d3e4dd2fe6651c8c3 227 Gene3D G3DSA:1.10.3720.10 8 226 1.9E-45 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_05165 8165646bc2ebb55d3e4dd2fe6651c8c3 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 120 1.2E-24 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDG60_14475 aded4f1e9a08718c17f9a37bd8b2cf91 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 82 6.6E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14475 aded4f1e9a08718c17f9a37bd8b2cf91 482 SMART SM00345 23 82 2.6E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG60_14475 aded4f1e9a08718c17f9a37bd8b2cf91 482 Gene3D G3DSA:1.10.10.10 6 87 1.4E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_14475 aded4f1e9a08718c17f9a37bd8b2cf91 482 Gene3D G3DSA:3.40.640.10 104 473 4.3E-94 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG60_14475 aded4f1e9a08718c17f9a37bd8b2cf91 482 Pfam PF00155 Aminotransferase class I and II 138 421 6.2E-20 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG60_14475 aded4f1e9a08718c17f9a37bd8b2cf91 482 SUPERFAMILY SSF53383 117 478 8.87E-73 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG60_14475 aded4f1e9a08718c17f9a37bd8b2cf91 482 SUPERFAMILY SSF46785 16 85 1.89E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_04210 ed1270675149bdf8246816983ee4d27e 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 146 5.3E-26 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_04210 ed1270675149bdf8246816983ee4d27e 148 Gene3D G3DSA:2.40.128.520 21 148 4.3E-18 T 23-10-2018 CDG60_10300 aab00ba91819f576010e92051b1d92d7 143 SUPERFAMILY SSF55961 1 131 6.09E-16 T 23-10-2018 CDG60_10300 aab00ba91819f576010e92051b1d92d7 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 141 7.8E-10 T 23-10-2018 IPR019587 Polyketide cyclase/dehydrase CDG60_10300 aab00ba91819f576010e92051b1d92d7 143 Gene3D G3DSA:3.30.530.20 1 143 5.4E-16 T 23-10-2018 IPR023393 START-like domain superfamily CDG60_07115 a2f27965289632e530bed25f52111a3b 304 SUPERFAMILY SSF52540 56 292 3.88E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_07115 a2f27965289632e530bed25f52111a3b 304 Gene3D G3DSA:3.40.50.300 54 302 1.6E-62 T 23-10-2018 CDG60_07115 a2f27965289632e530bed25f52111a3b 304 ProSitePatterns PS00211 ABC transporters family signature. 201 215 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG60_07115 a2f27965289632e530bed25f52111a3b 304 Pfam PF00005 ABC transporter 73 228 2.9E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG60_07115 a2f27965289632e530bed25f52111a3b 304 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 57 304 3.2E-122 T 23-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CDG60_07115 a2f27965289632e530bed25f52111a3b 304 SMART SM00382 81 276 2.1E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG60_14520 366ced7c386198103035ca18256529f6 194 SUPERFAMILY SSF53335 5 175 5.95E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_14520 366ced7c386198103035ca18256529f6 194 Gene3D G3DSA:3.40.50.150 1 194 4.0E-47 T 23-10-2018 CDG60_14520 366ced7c386198103035ca18256529f6 194 Pfam PF13649 Methyltransferase domain 40 128 2.9E-13 T 23-10-2018 CDG60_16295 72d74e209a44b9fa9a8e3367de2083fe 155 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 35 150 3.6E-28 T 23-10-2018 IPR019287 Holliday junction resolvase-related domain CDG60_02480 124c07a98d06bcdfefc2818d48e721af 304 SUPERFAMILY SSF103481 41 137 4.32E-11 T 23-10-2018 CDG60_02480 124c07a98d06bcdfefc2818d48e721af 304 Pfam PF00892 EamA-like transporter family 7 135 4.6E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_02480 124c07a98d06bcdfefc2818d48e721af 304 Pfam PF00892 EamA-like transporter family 151 282 4.8E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_17455 432abf36e6ccce95b65123f3f6d09a3b 180 SUPERFAMILY SSF48403 8 138 3.89E-9 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG60_17455 432abf36e6ccce95b65123f3f6d09a3b 180 Gene3D G3DSA:1.25.40.20 2 179 1.5E-12 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG60_16800 06c9183ec3b5c18057b92cd2c3da32f7 110 Pfam PF04999 Cell division protein FtsL 20 101 1.8E-25 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDG60_16800 06c9183ec3b5c18057b92cd2c3da32f7 110 Hamap MF_00910 Cell division protein FtsL [ftsL]. 17 100 13.386 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDG60_16800 06c9183ec3b5c18057b92cd2c3da32f7 110 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 100 2.4E-12 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDG60_18050 e88675b0f6a572e1663ac452f6cb4005 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 6.2E-129 T 23-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CDG60_18050 e88675b0f6a572e1663ac452f6cb4005 386 SUPERFAMILY SSF56059 5 383 5.65E-77 T 23-10-2018 CDG60_18050 e88675b0f6a572e1663ac452f6cb4005 386 Gene3D G3DSA:3.30.1490.330 258 342 2.3E-18 T 23-10-2018 CDG60_18050 e88675b0f6a572e1663ac452f6cb4005 386 SUPERFAMILY SSF52440 173 274 1.27E-31 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG60_17125 cfdebce24eac85659f15b07a73d4befb 361 Pfam PF04332 Protein of unknown function (DUF475) 54 356 8.6E-114 T 23-10-2018 IPR007427 Protein of unknown function DUF475 CDG60_11790 f05fef87beabdea1009964fdbfa18b56 266 Pfam PF01925 Sulfite exporter TauE/SafE 7 258 7.3E-48 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_16630 fbd02ba6cc389d86752f3314e3821aa7 401 Pfam PF00144 Beta-lactamase 107 381 3.9E-31 T 23-10-2018 IPR001466 Beta-lactamase-related CDG60_16630 fbd02ba6cc389d86752f3314e3821aa7 401 Gene3D G3DSA:3.40.710.10 58 391 4.6E-44 T 23-10-2018 CDG60_16630 fbd02ba6cc389d86752f3314e3821aa7 401 SUPERFAMILY SSF56601 66 386 1.22E-43 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_08135 c979106f2ffbeb3742e0bd710108a8bb 136 Hamap MF_00599 Cell division protein FtsB [ftsB]. 14 102 26.421 T 23-10-2018 IPR023081 Cell division protein FtsB CDG60_08135 c979106f2ffbeb3742e0bd710108a8bb 136 Pfam PF04977 Septum formation initiator 23 100 4.9E-25 T 23-10-2018 IPR007060 Septum formation initiator FtsL/DivIC CDG60_08570 f341689a0b91549b7a1c368ddbea7c46 317 Pfam PF13730 Helix-turn-helix domain 27 71 5.9E-9 T 23-10-2018 CDG60_08570 f341689a0b91549b7a1c368ddbea7c46 317 Gene3D G3DSA:1.10.10.10 24 111 3.7E-7 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_09620 cef6dc742bf313f8758704778f45e308 1240 Pfam PF13550 Putative phage tail protein 727 815 2.2E-6 T 23-10-2018 IPR032876 Tip attachment protein J CDG60_07740 ed82c7fd5491973d91097fecac06b112 76 Gene3D G3DSA:3.30.110.40 4 76 5.1E-13 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG60_07740 ed82c7fd5491973d91097fecac06b112 76 SUPERFAMILY SSF64307 9 75 9.16E-15 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG60_07740 ed82c7fd5491973d91097fecac06b112 76 Pfam PF01206 Sulfurtransferase TusA 9 75 2.8E-15 T 23-10-2018 IPR001455 TusA-like domain CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 Pfam PF00248 Aldo/keto reductase family 8 251 1.8E-46 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 SUPERFAMILY SSF51430 3 259 4.58E-76 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 23-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 PRINTS PR00069 Aldo-keto reductase signature 149 178 8.5E-40 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 PRINTS PR00069 Aldo-keto reductase signature 25 49 8.5E-40 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 PRINTS PR00069 Aldo-keto reductase signature 81 99 8.5E-40 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 PRINTS PR00069 Aldo-keto reductase signature 114 131 8.5E-40 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 PRINTS PR00069 Aldo-keto reductase signature 186 210 8.5E-40 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 PIRSF PIRSF000097 1 268 2.3E-63 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG60_08105 69b60bd364700ac68d8be1f40ea89f6b 268 Gene3D G3DSA:3.20.20.100 1 268 2.2E-84 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG60_06990 e1fad1117487b972fbf96c173d7b3e5b 137 SUPERFAMILY SSF51316 1 126 1.26E-31 T 23-10-2018 IPR011057 Mss4-like superfamily CDG60_06990 e1fad1117487b972fbf96c173d7b3e5b 137 Gene3D G3DSA:2.170.150.70 1 124 4.8E-15 T 23-10-2018 CDG60_06990 e1fad1117487b972fbf96c173d7b3e5b 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 109 2.3E-12 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDG60_08100 6f33ef38043c41e756f9afc63415e81e 393 SUPERFAMILY SSF103473 6 376 9.16E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_08100 6f33ef38043c41e756f9afc63415e81e 393 Gene3D G3DSA:1.20.1250.20 4 380 1.8E-45 T 23-10-2018 CDG60_08100 6f33ef38043c41e756f9afc63415e81e 393 Pfam PF07690 Major Facilitator Superfamily 10 329 1.3E-35 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_10535 2f22d66ceccc3beff22d217f579cc492 320 SUPERFAMILY SSF53474 28 316 1.62E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_10535 2f22d66ceccc3beff22d217f579cc492 320 Pfam PF12146 Serine aminopeptidase, S33 45 250 5.4E-21 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG60_10535 2f22d66ceccc3beff22d217f579cc492 320 Gene3D G3DSA:3.40.50.1820 19 319 8.0E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_05340 a60a873d58801a55249a33ce5f5147a5 95 Pfam PF04359 Protein of unknown function (DUF493) 13 95 4.5E-23 T 23-10-2018 IPR007454 Uncharacterised protein family UPF0250 CDG60_05340 a60a873d58801a55249a33ce5f5147a5 95 Gene3D G3DSA:3.30.70.260 8 95 4.5E-22 T 23-10-2018 CDG60_05340 a60a873d58801a55249a33ce5f5147a5 95 SUPERFAMILY SSF117991 9 95 2.49E-20 T 23-10-2018 IPR027471 YbeD-like domain superfamily CDG60_01280 d8c7b3fd439f1796454ead67839a2736 131 SUPERFAMILY SSF52821 9 131 3.14E-31 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_01280 d8c7b3fd439f1796454ead67839a2736 131 Gene3D G3DSA:3.40.250.10 1 131 2.1E-33 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG60_01280 d8c7b3fd439f1796454ead67839a2736 131 SMART SM00450 18 128 7.4E-22 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_01280 d8c7b3fd439f1796454ead67839a2736 131 Pfam PF00581 Rhodanese-like domain 20 124 5.7E-16 T 23-10-2018 IPR001763 Rhodanese-like domain CDG60_06310 b2d50458f86ac9da3906345cb1fb7ec4 139 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 72 125 9.7E-11 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG60_06310 b2d50458f86ac9da3906345cb1fb7ec4 139 SUPERFAMILY SSF74653 60 136 2.75E-14 T 23-10-2018 CDG60_06310 b2d50458f86ac9da3906345cb1fb7ec4 139 Gene3D G3DSA:3.30.1150.10 3 136 1.0E-12 T 23-10-2018 CDG60_06310 b2d50458f86ac9da3906345cb1fb7ec4 139 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 69 132 2.5E-12 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG60_04825 662f54c6aeaa69be7ae6dbf079b7a323 269 Pfam PF01578 Cytochrome C assembly protein 43 266 9.1E-22 T 23-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CDG60_03410 770bf58158f46b0fe5466de0effb4515 272 Gene3D G3DSA:3.30.565.40 42 155 1.9E-8 T 23-10-2018 CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 Pfam PF03848 Tellurite resistance protein TehB 91 284 3.6E-75 T 23-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 49 287 1.8E-86 T 23-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 Gene3D G3DSA:3.40.50.150 108 288 3.6E-38 T 23-10-2018 CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 Gene3D G3DSA:2.60.120.10 1 107 4.1E-39 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 SUPERFAMILY SSF51197 2 102 9.89E-34 T 23-10-2018 CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 SUPERFAMILY SSF53335 68 276 2.74E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 Pfam PF09313 Domain of unknown function (DUF1971) 9 89 7.9E-28 T 23-10-2018 IPR015392 Domain of unknown function DUF1971 CDG60_02350 3d158df9ce85e5c92a6ef17ba556be6e 289 PIRSF PIRSF005215 1 289 2.8E-116 T 23-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 CDG60_11605 6f3a450d659fde476ef9e9667162d809 347 Pfam PF03060 Nitronate monooxygenase 5 342 1.6E-72 T 23-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CDG60_11605 6f3a450d659fde476ef9e9667162d809 347 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 210 230 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDG60_11605 6f3a450d659fde476ef9e9667162d809 347 SUPERFAMILY SSF51412 3 335 4.12E-60 T 23-10-2018 CDG60_11605 6f3a450d659fde476ef9e9667162d809 347 Gene3D G3DSA:3.20.20.70 1 344 5.2E-103 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_07130 b4e93ecfa09ca8860a251e6a44800bf9 737 Gene3D G3DSA:2.60.40.10 257 337 4.9E-11 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_07130 b4e93ecfa09ca8860a251e6a44800bf9 737 Gene3D G3DSA:2.60.40.10 430 508 1.7E-10 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_07130 b4e93ecfa09ca8860a251e6a44800bf9 737 Gene3D G3DSA:2.60.40.10 345 422 4.3E-13 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_07130 b4e93ecfa09ca8860a251e6a44800bf9 737 Gene3D G3DSA:2.60.40.10 173 250 5.8E-15 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_07130 b4e93ecfa09ca8860a251e6a44800bf9 737 Gene3D G3DSA:2.60.40.10 521 622 5.9E-14 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 ProSitePatterns PS00221 MIP family signature. 60 68 - T 23-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 9.7E-60 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 Gene3D G3DSA:1.20.1080.10 1 227 6.5E-84 T 23-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 SUPERFAMILY SSF81338 2 224 8.37E-67 T 23-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 Pfam PF00230 Major intrinsic protein 2 221 3.7E-50 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 34.192 T 23-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.4E-52 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.4E-52 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 PRINTS PR00783 Major intrinsic protein family signature 135 153 1.4E-52 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.4E-52 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 PRINTS PR00783 Major intrinsic protein family signature 165 187 1.4E-52 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_17025 23169f7e9ee7ca6c02c04b33312d7215 230 PRINTS PR00783 Major intrinsic protein family signature 204 224 1.4E-52 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG60_10205 463b96d8fbf28281398fc4218549e757 165 Pfam PF03938 Outer membrane protein (OmpH-like) 9 160 1.2E-20 T 23-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CDG60_10205 463b96d8fbf28281398fc4218549e757 165 Gene3D G3DSA:3.30.910.20 16 165 5.1E-22 T 23-10-2018 IPR024930 Skp domain superfamily CDG60_10205 463b96d8fbf28281398fc4218549e757 165 SMART SM00935 9 162 2.3E-22 T 23-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CDG60_10205 463b96d8fbf28281398fc4218549e757 165 SUPERFAMILY SSF111384 20 162 1.96E-22 T 23-10-2018 CDG60_01090 01f52490f835ab6dee759b3bebdfd16c 423 Pfam PF13440 Polysaccharide biosynthesis protein 42 334 3.5E-24 T 23-10-2018 CDG60_09565 272d5d79034ebd18841ca195add47741 77 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 9 70 9.2E-22 T 23-10-2018 IPR018684 Protein of unknown function DUF2171 CDG60_04040 a1b829b16410c0ec89c9c5e2ee86975b 338 Gene3D G3DSA:3.30.70.1070 259 324 6.1E-8 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG60_04040 a1b829b16410c0ec89c9c5e2ee86975b 338 SUPERFAMILY SSF110997 256 329 2.35E-13 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG60_04040 a1b829b16410c0ec89c9c5e2ee86975b 338 Pfam PF05036 Sporulation related domain 257 330 4.3E-16 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 CDG60_06075 f86589ddae6a091c5b7d6c27d8518b61 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 341 1.6E-54 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG60_06075 f86589ddae6a091c5b7d6c27d8518b61 414 Gene3D G3DSA:3.20.20.70 1 353 1.7E-114 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_06075 f86589ddae6a091c5b7d6c27d8518b61 414 SUPERFAMILY SSF51395 1 346 2.22E-101 T 23-10-2018 CDG60_06770 d4cf8bc7689646a52adee0764fe71f9b 266 Gene3D G3DSA:1.10.12.10 210 255 1.5E-23 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDG60_06770 d4cf8bc7689646a52adee0764fe71f9b 266 SUPERFAMILY SSF52096 10 262 1.48E-63 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_06770 d4cf8bc7689646a52adee0764fe71f9b 266 Gene3D G3DSA:3.90.226.10 10 191 4.4E-56 T 23-10-2018 CDG60_06770 d4cf8bc7689646a52adee0764fe71f9b 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 264 1.8E-41 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG60_01900 11482d700d3594bac8521d7ae31621cb 178 Gene3D G3DSA:3.90.80.10 1 175 3.3E-71 T 23-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG60_01900 11482d700d3594bac8521d7ae31621cb 178 SUPERFAMILY SSF50324 3 174 3.27E-67 T 23-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG60_01900 11482d700d3594bac8521d7ae31621cb 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.247 T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG60_01900 11482d700d3594bac8521d7ae31621cb 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG60_01900 11482d700d3594bac8521d7ae31621cb 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 1.2E-52 T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG60_06595 2a0cab827e3bff7732c5bd647e125137 406 Pfam PF01594 AI-2E family transporter 10 341 2.3E-58 T 23-10-2018 IPR002549 Transmembrane protein TqsA-like CDG60_14635 9583dedf35876fa1c63a160e6d063087 44 Pfam PF07295 Zinc-ribbon containing domain 3 43 9.0E-6 T 23-10-2018 IPR009912 Zinc-ribbon containing domain CDG60_05645 5209cf4bc71150f9deee883969d2eeae 302 Pfam PF04228 Putative neutral zinc metallopeptidase 1 298 5.3E-112 T 23-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CDG60_08515 7a9e5cac22021792810becb48c5dd7b9 122 SUPERFAMILY SSF75169 1 122 3.14E-27 T 23-10-2018 IPR027396 DsrEFH-like CDG60_08515 7a9e5cac22021792810becb48c5dd7b9 122 Gene3D G3DSA:3.40.1260.10 1 122 5.4E-34 T 23-10-2018 IPR027396 DsrEFH-like CDG60_08515 7a9e5cac22021792810becb48c5dd7b9 122 Pfam PF02635 DsrE/DsrF-like family 1 122 1.4E-19 T 23-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CDG60_08515 7a9e5cac22021792810becb48c5dd7b9 122 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 122 1.2E-33 T 23-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CDG60_02700 5a8719deb06e74e14e44039ba046d616 153 Gene3D G3DSA:2.40.128.520 27 153 5.3E-14 T 23-10-2018 CDG60_02700 5a8719deb06e74e14e44039ba046d616 153 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 30 152 3.9E-22 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_17180 a1563ea7104b78df9f9c247e1b48e386 299 Pfam PF16956 Putative general bacterial porin 1 279 2.5E-16 T 23-10-2018 IPR031593 Putative general bacterial porin CDG60_04160 33b29b5e497764648fd25bf7a2ab916f 119 Gene3D G3DSA:3.30.450.30 4 117 1.9E-5 T 23-10-2018 CDG60_04160 33b29b5e497764648fd25bf7a2ab916f 119 SUPERFAMILY SSF103196 15 116 3.14E-6 T 23-10-2018 CDG60_05100 4303dfb734e757c1b92cff29192354fb 157 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 149 3.4E-12 T 23-10-2018 IPR002810 NfeD-like, C-terminal domain CDG60_05100 4303dfb734e757c1b92cff29192354fb 157 Gene3D G3DSA:2.40.50.140 77 155 7.5E-8 T 23-10-2018 CDG60_05100 4303dfb734e757c1b92cff29192354fb 157 SUPERFAMILY SSF141322 83 147 1.57E-5 T 23-10-2018 CDG60_04005 d5d8eefa826659a6d6a4f2a678c0fcef 615 Gene3D G3DSA:3.40.720.10 240 564 6.8E-56 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_04005 d5d8eefa826659a6d6a4f2a678c0fcef 615 PIRSF PIRSF004950 1 615 1.6E-196 T 23-10-2018 IPR012159 Inner membrane protein YejM CDG60_04005 d5d8eefa826659a6d6a4f2a678c0fcef 615 Pfam PF11893 Domain of unknown function (DUF3413) 5 243 1.3E-51 T 23-10-2018 IPR024588 Inner membrane protein YejM, N-terminal CDG60_04005 d5d8eefa826659a6d6a4f2a678c0fcef 615 SUPERFAMILY SSF53649 248 572 8.11E-55 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_04005 d5d8eefa826659a6d6a4f2a678c0fcef 615 Pfam PF00884 Sulfatase 252 530 1.7E-32 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG60_10380 c128ca299214a869f611f0e01b08f44b 140 Gene3D G3DSA:3.30.420.270 60 131 5.9E-6 T 23-10-2018 CDG60_10380 c128ca299214a869f611f0e01b08f44b 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 134 6.1E-23 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG60_01530 35c99142bd75126c7b0dcca5faa01b62 266 SUPERFAMILY SSF81345 4 255 4.45E-33 T 23-10-2018 IPR037294 ABC transporter, BtuC-like CDG60_01530 35c99142bd75126c7b0dcca5faa01b62 266 Pfam PF00950 ABC 3 transport family 6 258 3.6E-55 T 23-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CDG60_07370 b3d607659e58a7b2713d678dbdf96a5c 142 Pfam PF05433 Glycine zipper 2TM domain 80 120 2.0E-5 T 23-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CDG60_15390 5553a7933edd75b4de9de853b0b330b6 111 Pfam PF04273 Putative phosphatase (DUF442) 2 106 1.7E-30 T 23-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CDG60_15390 5553a7933edd75b4de9de853b0b330b6 111 Gene3D G3DSA:3.90.190.10 1 110 1.3E-29 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG60_15390 5553a7933edd75b4de9de853b0b330b6 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 105 1.5E-27 T 23-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 SUPERFAMILY SSF46785 2 83 4.69E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 Gene3D G3DSA:3.40.190.10 92 303 2.1E-59 T 23-10-2018 CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 Gene3D G3DSA:3.40.190.10 170 279 2.1E-59 T 23-10-2018 CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 Pfam PF03466 LysR substrate binding domain 97 305 8.6E-15 T 23-10-2018 IPR005119 LysR, substrate-binding CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 SUPERFAMILY SSF53850 90 305 1.27E-35 T 23-10-2018 CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.9E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 Gene3D G3DSA:1.10.10.10 1 86 3.8E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_12790 b9ffe056fb081a3cd670b55c10faf175 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG60_08760 a8d468f8f832d1f4fedb9471069fc5b0 93 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 88 3.0E-15 T 23-10-2018 IPR007633 Bacteriophage P2, GpY, holin CDG60_08760 a8d468f8f832d1f4fedb9471069fc5b0 93 Pfam PF04550 Phage holin family 2 1 85 8.4E-32 T 23-10-2018 IPR007633 Bacteriophage P2, GpY, holin CDG60_07610 332c751ab786b6f4b2004197ae79afcf 455 Pfam PF00324 Amino acid permease 17 450 1.2E-108 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG60_07610 332c751ab786b6f4b2004197ae79afcf 455 Gene3D G3DSA:1.20.1740.10 10 455 1.3E-62 T 23-10-2018 CDG60_07610 332c751ab786b6f4b2004197ae79afcf 455 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG60_07610 332c751ab786b6f4b2004197ae79afcf 455 PIRSF PIRSF006060 1 455 6.1E-76 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG60_05685 cc351bd2f6dadb35b42244783710583e 124 SUPERFAMILY SSF56784 1 110 8.73E-18 T 23-10-2018 IPR036412 HAD-like superfamily CDG60_05685 cc351bd2f6dadb35b42244783710583e 124 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 123 2.9E-60 T 23-10-2018 IPR010039 Capsule biosynthesis phosphatase CDG60_05685 cc351bd2f6dadb35b42244783710583e 124 Gene3D G3DSA:3.40.50.1000 1 124 1.9E-38 T 23-10-2018 IPR023214 HAD superfamily CDG60_05060 bead80e1cb1d72a4b2a6e296fc604918 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 12 326 1.4E-20 T 23-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CDG60_14225 2dd28fa45db24ea5379829fc929c321f 409 SUPERFAMILY SSF56935 61 409 4.12E-22 T 23-10-2018 CDG60_12510 7cec4403542d5de4ffa258ee972ecab7 408 Pfam PF07690 Major Facilitator Superfamily 22 365 2.1E-34 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_12510 7cec4403542d5de4ffa258ee972ecab7 408 Gene3D G3DSA:1.20.1250.20 14 405 2.8E-47 T 23-10-2018 CDG60_12510 7cec4403542d5de4ffa258ee972ecab7 408 SUPERFAMILY SSF103473 6 400 4.58E-59 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_14695 a380f03f5ede22c8c222c8d323278075 432 Pfam PF04966 Carbohydrate-selective porin, OprB family 77 430 1.4E-77 T 23-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CDG60_14695 a380f03f5ede22c8c222c8d323278075 432 Gene3D G3DSA:2.40.160.180 26 432 8.0E-109 T 23-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDG60_07710 7c4c17af2f9d4928590d9b87e5602b7d 480 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 23-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CDG60_07710 7c4c17af2f9d4928590d9b87e5602b7d 480 Pfam PF00916 Sulfate permease family 169 355 1.2E-27 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDG60_07710 7c4c17af2f9d4928590d9b87e5602b7d 480 Pfam PF00916 Sulfate permease family 14 143 1.5E-25 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDG60_07710 7c4c17af2f9d4928590d9b87e5602b7d 480 SUPERFAMILY SSF52091 392 478 1.08E-7 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_07710 7c4c17af2f9d4928590d9b87e5602b7d 480 Gene3D G3DSA:3.30.750.24 387 480 2.2E-22 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_13355 c83073e8a6c42d3c8a1b5eee4e61d7da 194 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 185 5.2E-23 T 23-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CDG60_13355 c83073e8a6c42d3c8a1b5eee4e61d7da 194 Pfam PF04973 Nicotinamide mononucleotide transporter 3 180 9.3E-45 T 23-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CDG60_01870 1c0141d8576b6758555fd0b285d58a2c 92 Gene3D G3DSA:2.60.200.60 2 86 2.8E-9 T 23-10-2018 CDG60_01870 1c0141d8576b6758555fd0b285d58a2c 92 Pfam PF05488 PAAR motif 11 78 1.9E-16 T 23-10-2018 IPR008727 PAAR motif CDG60_11630 ecb9560b72b3fe42ddacee40ed5303ba 364 Pfam PF00487 Fatty acid desaturase 76 340 6.8E-28 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG60_09410 fc7589388ee0cea2fb37727c2ed10b54 238 SUPERFAMILY SSF52266 43 235 2.29E-29 T 23-10-2018 CDG60_09410 fc7589388ee0cea2fb37727c2ed10b54 238 Gene3D G3DSA:3.40.50.1110 31 238 1.5E-24 T 23-10-2018 IPR036514 SGNH hydrolase superfamily CDG60_09410 fc7589388ee0cea2fb37727c2ed10b54 238 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 51 222 2.6E-16 T 23-10-2018 IPR013830 SGNH hydrolase-type esterase domain CDG60_14895 2a994c2839b0391f6d8ac7c33a2d946e 170 SUPERFAMILY SSF160631 48 169 6.28E-9 T 23-10-2018 CDG60_14895 2a994c2839b0391f6d8ac7c33a2d946e 170 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 49 157 5.4E-10 T 23-10-2018 IPR018958 Knr4/Smi1-like domain CDG60_14895 2a994c2839b0391f6d8ac7c33a2d946e 170 Gene3D G3DSA:3.40.1580.10 47 169 1.4E-9 T 23-10-2018 IPR037883 Knr4/Smi1-like domain superfamily CDG60_03965 edb41dddb5c4b63894422e764739398a 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 230 5.4E-32 T 23-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CDG60_03965 edb41dddb5c4b63894422e764739398a 240 SUPERFAMILY SSF51695 1 236 6.28E-50 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG60_03965 edb41dddb5c4b63894422e764739398a 240 Gene3D G3DSA:3.20.20.190 1 240 7.5E-53 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG60_06385 630e8dfc5f6c4fe2002116f18d8ee5c6 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 209 1.6E-41 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG60_06385 630e8dfc5f6c4fe2002116f18d8ee5c6 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 8 227 36.415 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG60_06385 630e8dfc5f6c4fe2002116f18d8ee5c6 232 TIGRFAM TIGR02796 tolQ: protein TolQ 9 222 5.6E-77 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG60_09525 1a3993ae07e208e86ffacec24c793ece 266 Pfam PF02498 BRO family, N-terminal domain 14 100 3.1E-10 T 23-10-2018 IPR003497 BRO N-terminal domain CDG60_09525 1a3993ae07e208e86ffacec24c793ece 266 SMART SM01040 14 103 3.9E-16 T 23-10-2018 IPR003497 BRO N-terminal domain CDG60_02980 5e4071242c354cc81d578e193bc9d024 225 Pfam PF07077 Protein of unknown function (DUF1345) 41 214 1.4E-53 T 23-10-2018 IPR009781 Protein of unknown function DUF1345 CDG60_16070 2737a022bb9cc4e509bc76d5e14993f0 854 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 15 829 23.348 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG60_16070 2737a022bb9cc4e509bc76d5e14993f0 854 SUPERFAMILY SSF69593 260 495 4.71E-24 T 23-10-2018 CDG60_16070 2737a022bb9cc4e509bc76d5e14993f0 854 PIRSF PIRSF500064 10 834 4.0E-229 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG60_16070 2737a022bb9cc4e509bc76d5e14993f0 854 SMART SM00563 314 441 4.9E-24 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_16070 2737a022bb9cc4e509bc76d5e14993f0 854 PIRSF PIRSF000437 29 837 9.2E-222 T 23-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CDG60_16070 2737a022bb9cc4e509bc76d5e14993f0 854 Pfam PF01553 Acyltransferase 297 436 3.1E-20 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG60_16070 2737a022bb9cc4e509bc76d5e14993f0 854 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 15 820 1.3E-298 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG60_15365 d24459ffe00b1f54dc0a775b3e03ebbf 166 Gene3D G3DSA:3.10.129.10 10 162 1.4E-37 T 23-10-2018 CDG60_15365 d24459ffe00b1f54dc0a775b3e03ebbf 166 SUPERFAMILY SSF54637 26 162 1.81E-22 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_15365 d24459ffe00b1f54dc0a775b3e03ebbf 166 Pfam PF14539 Domain of unknown function (DUF4442) 24 158 1.1E-34 T 23-10-2018 IPR027961 Protein of unknown function DUF4442 CDG60_17280 3ca449db55d7d1d2497c4c3fc1a37d30 361 SUPERFAMILY SSF51395 1 351 9.62E-112 T 23-10-2018 CDG60_17280 3ca449db55d7d1d2497c4c3fc1a37d30 361 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 329 2.3E-75 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG60_17280 3ca449db55d7d1d2497c4c3fc1a37d30 361 Gene3D G3DSA:3.20.20.70 1 358 1.7E-125 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_08705 b63372008455e91efe0b2144773eb881 159 Pfam PF16460 Phage tail tube, TTP, lambda-like 28 120 5.7E-10 T 23-10-2018 IPR032495 Phage tail tube protein, lambda-like CDG60_12595 25dbc0a528c5a220dc7e4d1cdfe27348 601 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 599 1.9E-155 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like CDG60_12595 25dbc0a528c5a220dc7e4d1cdfe27348 601 PIRSF PIRSF028304 1 600 2.4E-156 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like CDG60_12595 25dbc0a528c5a220dc7e4d1cdfe27348 601 Pfam PF05947 Type VI secretion system, TssF 6 598 8.1E-146 T 23-10-2018 IPR010272 Type VI secretion system, TssF-like CDG60_10945 0c2e7d596bfa13b9ded10a96b461fa50 139 Pfam PF02566 OsmC-like protein 33 132 2.2E-20 T 23-10-2018 IPR003718 OsmC/Ohr family CDG60_10945 0c2e7d596bfa13b9ded10a96b461fa50 139 Gene3D G3DSA:2.20.25.10 1 32 2.6E-7 T 23-10-2018 CDG60_10945 0c2e7d596bfa13b9ded10a96b461fa50 139 Gene3D G3DSA:3.30.300.20 39 139 1.1E-29 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG60_10945 0c2e7d596bfa13b9ded10a96b461fa50 139 SUPERFAMILY SSF82784 1 137 3.27E-40 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG60_05585 c7899cae70d9187c184157df773c3a27 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 119 5.3E-33 T 23-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDG60_05585 c7899cae70d9187c184157df773c3a27 121 SUPERFAMILY SSF81343 4 119 2.94E-25 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05585 c7899cae70d9187c184157df773c3a27 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 12 106 4.9E-7 T 23-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_05585 c7899cae70d9187c184157df773c3a27 121 PIRSF PIRSF000169 1 121 5.2E-39 T 23-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDG60_05585 c7899cae70d9187c184157df773c3a27 121 Gene3D G3DSA:1.20.1300.10 1 120 1.1E-28 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG60_08375 c30cb3b846aca514f1d7c2be6adae38b 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 138 188 1.6E-14 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG60_08375 c30cb3b846aca514f1d7c2be6adae38b 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 240 1.2E-10 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG60_08375 c30cb3b846aca514f1d7c2be6adae38b 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 74 123 1.8E-13 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG60_08375 c30cb3b846aca514f1d7c2be6adae38b 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 19 69 2.7E-17 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG60_02765 2b38ff924085029ac5388904fd4b1aa0 85 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 23-10-2018 IPR001455 TusA-like domain CDG60_02765 2b38ff924085029ac5388904fd4b1aa0 85 Pfam PF01206 Sulfurtransferase TusA 10 84 7.0E-22 T 23-10-2018 IPR001455 TusA-like domain CDG60_02765 2b38ff924085029ac5388904fd4b1aa0 85 Gene3D G3DSA:3.30.110.40 2 85 1.9E-25 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG60_02765 2b38ff924085029ac5388904fd4b1aa0 85 SUPERFAMILY SSF64307 4 85 7.46E-21 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG60_11565 7d0a91bba97efe455c423c58c2c2835d 71 Pfam PF07866 Protein of unknown function (DUF1653) 5 66 1.9E-28 T 23-10-2018 IPR023387 DUF1653-like domain CDG60_11565 7d0a91bba97efe455c423c58c2c2835d 71 Gene3D G3DSA:2.30.30.320 1 71 4.1E-29 T 23-10-2018 IPR037135 DUF1653-like domain superfamily CDG60_02690 87554bfafeadf9b1b0dc3ec666939ebe 112 Gene3D G3DSA:1.10.1660.10 22 110 5.1E-20 T 23-10-2018 CDG60_02690 87554bfafeadf9b1b0dc3ec666939ebe 112 Pfam PF13591 MerR HTH family regulatory protein 28 107 3.1E-15 T 23-10-2018 CDG60_03645 e9cb76f89656b79549a66776f17002ea 135 Gene3D G3DSA:1.10.3430.10 1 126 6.2E-30 T 23-10-2018 IPR029020 Ammonium/urea transporter CDG60_03645 e9cb76f89656b79549a66776f17002ea 135 SUPERFAMILY SSF111352 2 94 5.89E-18 T 23-10-2018 CDG60_03645 e9cb76f89656b79549a66776f17002ea 135 Pfam PF00909 Ammonium Transporter Family 2 117 1.4E-27 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDG60_16565 78be913dcb169e653b3904522aeb32bd 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 6.0E-14 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDG60_16565 78be913dcb169e653b3904522aeb32bd 64 Gene3D G3DSA:1.10.10.1100 1 57 3.8E-23 T 23-10-2018 CDG60_16395 0c6d9f1a5408c2926c95db8d479d6a8d 256 Pfam PF01925 Sulfite exporter TauE/SafE 10 248 1.5E-37 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_10840 fd02471beea080f0dd73aed1017c0bc6 421 Gene3D G3DSA:3.40.710.30 15 409 9.5E-96 T 23-10-2018 CDG60_10840 fd02471beea080f0dd73aed1017c0bc6 421 Pfam PF00144 Beta-lactamase 38 387 8.9E-54 T 23-10-2018 IPR001466 Beta-lactamase-related CDG60_10840 fd02471beea080f0dd73aed1017c0bc6 421 SUPERFAMILY SSF56601 37 391 1.67E-66 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG60_07720 063a4a7518aa30fd35fe36cbea2e8426 261 Hamap MF_00443 Thiazole synthase [thiG]. 5 260 41.924 T 23-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDG60_07720 063a4a7518aa30fd35fe36cbea2e8426 261 Gene3D G3DSA:3.20.20.70 1 259 6.7E-119 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG60_07720 063a4a7518aa30fd35fe36cbea2e8426 261 SUPERFAMILY SSF110399 5 246 3.14E-89 T 23-10-2018 CDG60_07720 063a4a7518aa30fd35fe36cbea2e8426 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 254 3.1E-109 T 23-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDG60_15565 c254f969d9a974851ac4093c3935c5c5 203 SUPERFAMILY SSF53335 7 202 2.51E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_15565 c254f969d9a974851ac4093c3935c5c5 203 Gene3D G3DSA:3.40.50.150 8 202 1.3E-31 T 23-10-2018 CDG60_15565 c254f969d9a974851ac4093c3935c5c5 203 Pfam PF13649 Methyltransferase domain 49 138 6.3E-14 T 23-10-2018 CDG60_13340 19c9dec535885ce73fd07c66877285f2 424 Pfam PF07690 Major Facilitator Superfamily 60 383 4.6E-25 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_13340 19c9dec535885ce73fd07c66877285f2 424 SUPERFAMILY SSF103473 10 420 4.32E-59 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_13340 19c9dec535885ce73fd07c66877285f2 424 Gene3D G3DSA:1.20.1250.20 12 424 1.3E-57 T 23-10-2018 CDG60_08350 ea2b193b501d51aaabdd2b413fe5cf6d 205 Pfam PF07290 Protein of unknown function (DUF1449) 11 191 2.0E-20 T 23-10-2018 IPR010840 Protein of unknown function DUF1449 CDG60_04980 89de45df5893b982de6bac9355682844 187 Pfam PF02620 Uncharacterized ACR, COG1399 64 183 3.3E-16 T 23-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CDG60_12670 010ca2067b0086c74e7de90599bcfafb 125 SUPERFAMILY SSF54593 5 124 1.11E-15 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_12670 010ca2067b0086c74e7de90599bcfafb 125 Gene3D G3DSA:3.10.180.10 5 124 2.7E-22 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG60_00640 20a7180d1f8fdf47dc0b1ac2b52e182b 198 Pfam PF01810 LysE type translocator 9 187 6.5E-14 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_09560 15ed818feb944253ebbf39eda9646aa7 222 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 7.4E-64 T 23-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CDG60_09560 15ed818feb944253ebbf39eda9646aa7 222 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.309 T 23-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CDG60_08200 3537bf125cc21abf952817d6a4cbf8b9 216 Gene3D G3DSA:3.40.50.720 1 216 1.2E-52 T 23-10-2018 CDG60_08200 3537bf125cc21abf952817d6a4cbf8b9 216 Pfam PF13460 NAD(P)H-binding 7 203 3.4E-29 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG60_08200 3537bf125cc21abf952817d6a4cbf8b9 216 SUPERFAMILY SSF51735 1 214 1.84E-36 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG60_09735 1c8df28b4ccb30b174acef1242e85782 154 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 100 3.2E-39 T 23-10-2018 IPR018738 Protein of unknown function DUF2280 CDG60_07365 3f08494f0e78dace928b4a2ac65c570d 173 Pfam PF05433 Glycine zipper 2TM domain 80 120 1.5E-5 T 23-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CDG60_12055 e667804ef89b0633a08c97e391de3a51 466 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDG60_12055 e667804ef89b0633a08c97e391de3a51 466 Gene3D G3DSA:2.40.30.10 364 448 2.1E-7 T 23-10-2018 CDG60_12055 e667804ef89b0633a08c97e391de3a51 466 Pfam PF01136 Peptidase family U32 79 350 1.1E-95 T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDG60_12055 e667804ef89b0633a08c97e391de3a51 466 Pfam PF16325 Peptidase family U32 C-terminal domain 367 446 1.9E-17 T 23-10-2018 IPR032525 Peptidase family U32, C-terminal CDG60_02890 32254ad961614b411d4a5ec407fef708 138 Pfam PF07007 Lysozyme inhibitor LprI 53 132 1.6E-4 T 23-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CDG60_14540 0850136399c623600056d2f7493b7692 347 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 343 4.7E-114 T 23-10-2018 IPR017686 Phage/plasmid-like protein CDG60_14540 0850136399c623600056d2f7493b7692 347 Pfam PF06067 Domain of unknown function (DUF932) 77 327 2.6E-77 T 23-10-2018 IPR026325 Protein of unknown function DUF932 CDG60_16075 cd298931ded38096b6fc6930141a7d3d 661 Gene3D G3DSA:3.40.50.300 164 366 2.4E-20 T 23-10-2018 CDG60_16075 cd298931ded38096b6fc6930141a7d3d 661 SUPERFAMILY SSF52540 168 439 1.43E-22 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG60_01990 f6ece208ebf3dc1bd5799fe0bedfd53e 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 344 1.1E-93 T 23-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CDG60_01990 f6ece208ebf3dc1bd5799fe0bedfd53e 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 6.4E-73 T 23-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CDG60_00330 c0e6ca88115aa66847162269bf52e5a2 343 Pfam PF11412 Disulphide bond corrector protein DsbC 32 145 1.8E-30 T 23-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDG60_00330 c0e6ca88115aa66847162269bf52e5a2 343 SUPERFAMILY SSF74863 32 145 1.57E-31 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG60_00330 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 155 281 1.1E-31 T 23-10-2018 CDG60_00330 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 282 343 3.3E-17 T 23-10-2018 CDG60_00330 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:2.60.40.1250 24 154 3.6E-38 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG60_01525 c44de0fd8e9181e9434ecb2adfd2814d 256 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 2.2E-34 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_00780 5b8b28725bc186866aee137a06570ac9 336 Gene3D G3DSA:3.40.190.170 58 244 1.5E-10 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG60_06135 02b9927c4c0a4fecf61d0f89d8562fd8 112 Pfam PF11804 Protein of unknown function (DUF3325) 7 103 2.8E-21 T 23-10-2018 IPR021762 Protein of unknown function DUF3325 CDG60_11795 0d77aacb1df39aea5d084f0d349922c6 164 SMART SM00903 11 157 9.2E-55 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_11795 0d77aacb1df39aea5d084f0d349922c6 164 SUPERFAMILY SSF50475 6 160 5.89E-49 T 23-10-2018 CDG60_11795 0d77aacb1df39aea5d084f0d349922c6 164 Gene3D G3DSA:2.30.110.10 1 162 1.6E-48 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG60_11795 0d77aacb1df39aea5d084f0d349922c6 164 Pfam PF01613 Flavin reductase like domain 11 159 1.2E-36 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG60_05915 a50aff90ddcbd3defae92ae6f2adb8c1 301 Hamap MF_00188 Protease HtpX [htpX]. 1 298 25.329 T 23-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CDG60_05915 a50aff90ddcbd3defae92ae6f2adb8c1 301 Gene3D G3DSA:3.30.2010.10 74 165 2.1E-33 T 23-10-2018 CDG60_05915 a50aff90ddcbd3defae92ae6f2adb8c1 301 Pfam PF01435 Peptidase family M48 81 298 4.8E-41 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG60_06165 c3d05e23a7eff82c24eebd75044bf33d 91 Pfam PF10734 Protein of unknown function (DUF2523) 4 80 1.3E-15 T 23-10-2018 IPR019670 Protein of unkown function DUF2523 CDG60_14525 784d9862f4d7732256dc41cb90283961 76 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 68 2.8E-17 T 23-10-2018 IPR010260 DNA-binding transcriptional activator AlpA CDG60_18075 2373e0aaaf5464d10998ccd5fe06cd6d 83 Pfam PF04226 Transglycosylase associated protein 34 80 3.5E-13 T 23-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CDG60_11005 0f80f21698078bf2472f31052e7042f7 246 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 225 3.4E-19 T 23-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CDG60_11005 0f80f21698078bf2472f31052e7042f7 246 SUPERFAMILY SSF159594 38 231 4.18E-16 T 23-10-2018 CDG60_17800 f3ffa389b21990ff8c25f06fe9d7518c 433 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 424 2.1E-107 T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CDG60_17800 f3ffa389b21990ff8c25f06fe9d7518c 433 Pfam PF00860 Permease family 30 402 2.5E-94 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CDG60_11725 81215766ad2c7a94980682a0418249b3 131 Pfam PF11342 Protein of unknown function (DUF3144) 20 105 4.7E-30 T 23-10-2018 IPR021490 Protein of unknown function DUF3144 CDG60_03045 3b895314fcf4c6ae36bea57e83ec030a 292 Pfam PF14305 TupA-like ATPgrasp 45 290 2.6E-53 T 23-10-2018 IPR029465 TupA-like ATPgrasp protein CDG60_07205 56c742bb246b0717001e8f42218dc5c3 271 Gene3D G3DSA:2.70.70.10 146 271 9.9E-32 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG60_07205 56c742bb246b0717001e8f42218dc5c3 271 SUPERFAMILY SSF51261 53 268 4.45E-42 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG60_07205 56c742bb246b0717001e8f42218dc5c3 271 SMART SM00257 53 97 1.8E-12 T 23-10-2018 IPR018392 LysM domain CDG60_07205 56c742bb246b0717001e8f42218dc5c3 271 Pfam PF01476 LysM domain 54 96 8.7E-13 T 23-10-2018 IPR018392 LysM domain CDG60_07205 56c742bb246b0717001e8f42218dc5c3 271 Gene3D G3DSA:3.10.350.10 50 104 1.5E-14 T 23-10-2018 IPR036779 LysM domain superfamily CDG60_07205 56c742bb246b0717001e8f42218dc5c3 271 Pfam PF01551 Peptidase family M23 172 264 4.3E-28 T 23-10-2018 IPR016047 Peptidase M23 CDG60_03270 0cd752448474a371dfbe0c94609646aa 187 Pfam PF03729 Short repeat of unknown function (DUF308) 135 179 0.0081 T 23-10-2018 IPR005325 Protein of unknown function DUF308, membrane CDG60_03270 0cd752448474a371dfbe0c94609646aa 187 Pfam PF03729 Short repeat of unknown function (DUF308) 86 147 1.1E-8 T 23-10-2018 IPR005325 Protein of unknown function DUF308, membrane CDG60_03270 0cd752448474a371dfbe0c94609646aa 187 Pfam PF03729 Short repeat of unknown function (DUF308) 22 91 1.1E-10 T 23-10-2018 IPR005325 Protein of unknown function DUF308, membrane CDG60_02605 638377a0b4334b1f37ad737718fa9d14 360 Pfam PF01734 Patatin-like phospholipase 42 248 1.9E-7 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDG60_02605 638377a0b4334b1f37ad737718fa9d14 360 SUPERFAMILY SSF52151 42 313 7.59E-15 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG60_12575 eb883f314742f3a0981265ec972f604a 321 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 10 108 1.3E-15 T 23-10-2018 IPR017748 T6S-associated protein TagF CDG60_12575 eb883f314742f3a0981265ec972f604a 321 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 141 1.8E-26 T 23-10-2018 IPR017748 T6S-associated protein TagF CDG60_12575 eb883f314742f3a0981265ec972f604a 321 Gene3D G3DSA:3.40.1730.10 7 184 7.5E-12 T 23-10-2018 IPR038225 T6S-associated protein TagF superfamily CDG60_17465 34e64c63faea1c9350818c87d9c5879c 245 SUPERFAMILY SSF111364 25 245 8.11E-62 T 23-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDG60_17465 34e64c63faea1c9350818c87d9c5879c 245 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 48 203 3.4E-12 T 23-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CDG60_17465 34e64c63faea1c9350818c87d9c5879c 245 Gene3D G3DSA:2.40.230.20 17 239 2.1E-26 T 23-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDG60_17515 76974745764d42686b74477f796407bf 179 Gene3D G3DSA:1.25.40.10 79 179 4.6E-35 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_17515 76974745764d42686b74477f796407bf 179 Gene3D G3DSA:1.20.58.320 1 78 3.5E-25 T 23-10-2018 CDG60_17515 76974745764d42686b74477f796407bf 179 SUPERFAMILY SSF48452 2 175 2.24E-67 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG60_17515 76974745764d42686b74477f796407bf 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 175 2.5E-62 T 23-10-2018 IPR010323 Protein of unknown function DUF924 CDG60_04440 b7ba08c0520c6cfc026cd0c92da052a8 316 SUPERFAMILY SSF103515 217 315 5.23E-6 T 23-10-2018 IPR036709 Autotransporter beta-domain superfamily CDG60_04440 b7ba08c0520c6cfc026cd0c92da052a8 316 Pfam PF05275 Copper resistance protein B precursor (CopB) 104 316 1.3E-50 T 23-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 CDG60_15830 38f849c9e7dd9125a586571af4a07021 190 Pfam PF01694 Rhomboid family 39 180 9.4E-11 T 23-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CDG60_15830 38f849c9e7dd9125a586571af4a07021 190 SUPERFAMILY SSF144091 8 184 1.31E-18 T 23-10-2018 CDG60_15830 38f849c9e7dd9125a586571af4a07021 190 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 28 178 2.5E-42 T 23-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria CDG60_15830 38f849c9e7dd9125a586571af4a07021 190 Gene3D G3DSA:1.20.1540.10 4 183 1.6E-13 T 23-10-2018 IPR035952 Rhomboid-like superfamily CDG60_13725 71a91801c7ed762b1b7add29d9c4efff 109 SUPERFAMILY SSF54909 1 95 3.58E-27 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG60_13725 71a91801c7ed762b1b7add29d9c4efff 109 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 8.1E-19 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CDG60_13725 71a91801c7ed762b1b7add29d9c4efff 109 Gene3D G3DSA:3.30.70.100 2 95 2.1E-31 T 23-10-2018 CDG60_15410 e69c27d91a17777cb28296888c787a52 290 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 78 221 1.6E-21 T 23-10-2018 IPR006342 Methyltransferase FkbM CDG60_15410 e69c27d91a17777cb28296888c787a52 290 Gene3D G3DSA:3.40.50.150 66 261 3.1E-27 T 23-10-2018 CDG60_15410 e69c27d91a17777cb28296888c787a52 290 SUPERFAMILY SSF53335 40 260 1.27E-35 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG60_15410 e69c27d91a17777cb28296888c787a52 290 Pfam PF05050 Methyltransferase FkbM domain 81 255 6.0E-13 T 23-10-2018 IPR006342 Methyltransferase FkbM CDG60_16115 aa025f2562f4579327f68356f7ed4475 95 SUPERFAMILY SSF52091 9 93 7.85E-9 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_16115 aa025f2562f4579327f68356f7ed4475 95 Gene3D G3DSA:3.30.750.24 8 95 3.4E-8 T 23-10-2018 IPR036513 STAS domain superfamily CDG60_16115 aa025f2562f4579327f68356f7ed4475 95 Pfam PF13466 STAS domain 9 84 3.6E-9 T 23-10-2018 IPR002645 STAS domain CDG60_11720 9ffa5bdcc0cb3f78f834594a0475f46f 114 Pfam PF11342 Protein of unknown function (DUF3144) 13 95 5.1E-26 T 23-10-2018 IPR021490 Protein of unknown function DUF3144 CDG60_06370 0b5e63d6aa41120d18d4ab65224afe5d 308 SUPERFAMILY SSF55073 151 299 7.85E-23 T 23-10-2018 IPR029787 Nucleotide cyclase CDG60_06370 0b5e63d6aa41120d18d4ab65224afe5d 308 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 299 3.1E-27 T 23-10-2018 IPR000160 GGDEF domain CDG60_06370 0b5e63d6aa41120d18d4ab65224afe5d 308 Gene3D G3DSA:3.30.70.270 132 302 4.5E-28 T 23-10-2018 CDG60_06370 0b5e63d6aa41120d18d4ab65224afe5d 308 SMART SM00267 134 301 2.0E-13 T 23-10-2018 IPR000160 GGDEF domain CDG60_06370 0b5e63d6aa41120d18d4ab65224afe5d 308 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 299 1.1E-24 T 23-10-2018 IPR000160 GGDEF domain CDG60_01180 ba99b71acbfc6b85fde3161a1050a567 511 Pfam PF01048 Phosphorylase superfamily 247 503 2.7E-17 T 23-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CDG60_01180 ba99b71acbfc6b85fde3161a1050a567 511 SUPERFAMILY SSF53167 103 504 9.25E-34 T 23-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CDG60_10805 c7f3289ce961fe6cad3493487d6ca2fb 375 Pfam PF02698 DUF218 domain 211 358 1.6E-20 T 23-10-2018 IPR003848 Domain of unknown function DUF218 CDG60_07180 ba0de16f2e02af2f0d67e34404dd6bf0 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 47 9.3E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_07180 ba0de16f2e02af2f0d67e34404dd6bf0 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 4.8E-8 T 23-10-2018 IPR001451 Hexapeptide repeat CDG60_07180 ba0de16f2e02af2f0d67e34404dd6bf0 179 Gene3D G3DSA:2.160.10.10 1 179 2.1E-57 T 23-10-2018 CDG60_07180 ba0de16f2e02af2f0d67e34404dd6bf0 179 SUPERFAMILY SSF51161 5 177 2.08E-45 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG60_03625 55e5a34a9aaddcab35d35cd2bf514b07 106 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 5 98 3.2E-35 T 23-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CDG60_02415 b3214b63064efc6cb6fe273bdc5b2f10 208 Gene3D G3DSA:2.60.120.590 19 207 3.2E-54 T 23-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CDG60_02415 b3214b63064efc6cb6fe273bdc5b2f10 208 SUPERFAMILY SSF51197 20 204 3.71E-50 T 23-10-2018 CDG60_02415 b3214b63064efc6cb6fe273bdc5b2f10 208 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 28 202 1.6E-25 T 23-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CDG60_16390 6fb5e75540d1aabaa85a41bfafdfba8c 288 Pfam PF00892 EamA-like transporter family 8 132 4.5E-7 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_16390 6fb5e75540d1aabaa85a41bfafdfba8c 288 Pfam PF00892 EamA-like transporter family 146 279 5.2E-16 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_16390 6fb5e75540d1aabaa85a41bfafdfba8c 288 SUPERFAMILY SSF103481 184 282 7.98E-11 T 23-10-2018 CDG60_07125 aec9e08a8448a634aed1d85cb42abce6 320 Gene3D G3DSA:3.90.226.10 85 257 8.9E-38 T 23-10-2018 CDG60_07125 aec9e08a8448a634aed1d85cb42abce6 320 Gene3D G3DSA:3.40.1750.20 159 223 8.9E-38 T 23-10-2018 CDG60_07125 aec9e08a8448a634aed1d85cb42abce6 320 Pfam PF08496 Peptidase family S49 N-terminal 10 115 2.8E-31 T 23-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CDG60_07125 aec9e08a8448a634aed1d85cb42abce6 320 Pfam PF01343 Peptidase family S49 119 257 1.3E-39 T 23-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CDG60_07125 aec9e08a8448a634aed1d85cb42abce6 320 SUPERFAMILY SSF52096 55 256 1.14E-23 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG60_16405 e6f3dfae6950ae0bf132846e2567b085 341 Pfam PF03280 Proteobacterial lipase chaperone protein 130 319 3.6E-52 T 23-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 CDG60_16405 e6f3dfae6950ae0bf132846e2567b085 341 SUPERFAMILY SSF158855 60 332 1.44E-86 T 23-10-2018 CDG60_16405 e6f3dfae6950ae0bf132846e2567b085 341 Hamap MF_00790 Lipase chaperone [lifO]. 2 329 20.94 T 23-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 CDG60_04340 e0f3277b5bc0e6854d9b92e10d22489e 117 Pfam PF00893 Small Multidrug Resistance protein 12 102 1.7E-12 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG60_04340 e0f3277b5bc0e6854d9b92e10d22489e 117 Gene3D G3DSA:1.10.3730.20 11 116 9.1E-17 T 23-10-2018 CDG60_04340 e0f3277b5bc0e6854d9b92e10d22489e 117 SUPERFAMILY SSF103481 15 113 7.85E-13 T 23-10-2018 CDG60_15790 3f8a10af93400e270cf69f59b669a3e5 71 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 49 8.6E-17 T 23-10-2018 IPR012658 Conserved hypothetical protein CHP02443 CDG60_15790 3f8a10af93400e270cf69f59b669a3e5 71 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 2.9E-18 T 23-10-2018 IPR012658 Conserved hypothetical protein CHP02443 CDG60_05555 cf777c452d1662e34b8cda1f730d8d21 319 Pfam PF10118 Predicted metal-dependent hydrolase 33 285 8.5E-60 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_13455 71035873e6721c5bc10ffb453a6a50e2 429 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 3 147 6.6E-33 T 23-10-2018 IPR009827 Dicarboxylate carrier MatC N-terminal CDG60_15335 4e217ea2634b8e777e0b70c73ab83dbf 204 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 202 14.576 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CDG60_15335 4e217ea2634b8e777e0b70c73ab83dbf 204 Pfam PF04279 Intracellular septation protein A 1 201 1.6E-42 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CDG60_04445 80444af5ef9e79e9121fe7800789296a 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.7E-28 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG60_04445 80444af5ef9e79e9121fe7800789296a 105 Gene3D G3DSA:1.10.3730.20 1 105 5.0E-32 T 23-10-2018 CDG60_04445 80444af5ef9e79e9121fe7800789296a 105 SUPERFAMILY SSF103481 5 104 2.48E-21 T 23-10-2018 CDG60_17655 f575a7351d42780b4462b3ff343f3985 314 Gene3D G3DSA:1.20.1530.20 1 309 1.2E-117 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG60_17655 f575a7351d42780b4462b3ff343f3985 314 Pfam PF01758 Sodium Bile acid symporter family 43 220 2.4E-44 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG60_12495 b3303f0944356e472813bf62b733b89e 359 Pfam PF03922 OmpW family 122 359 2.3E-17 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG60_12495 b3303f0944356e472813bf62b733b89e 359 Gene3D G3DSA:2.40.160.20 100 359 1.2E-54 T 23-10-2018 CDG60_12495 b3303f0944356e472813bf62b733b89e 359 SUPERFAMILY SSF56925 113 359 8.63E-17 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG60_02370 bcd06d27a3b96517b5b7275e77cf739f 136 Pfam PF06713 Bacterial PH domain 60 133 1.4E-18 T 23-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 CDG60_14885 65dd1f0a318094128d353d752ee36490 128 Gene3D G3DSA:1.20.1280.230 24 128 3.6E-41 T 23-10-2018 CDG60_14885 65dd1f0a318094128d353d752ee36490 128 Pfam PF16309 Domian of unknown function (DUF4951) 46 128 5.1E-37 T 23-10-2018 IPR032538 Protein of unknown function DUF4951 CDG60_16255 75507c4f6f20158a54af7d5099ba944b 71 Pfam PF08410 Domain of unknown function (DUF1737) 2 50 1.5E-21 T 23-10-2018 IPR013619 Domain of unknown function DUF1737 CDG60_10150 f7e4f3f3dced135eb2beab33c0568f4b 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 29 100 5.6E-7 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG60_10150 f7e4f3f3dced135eb2beab33c0568f4b 244 SUPERFAMILY SSF53254 27 197 3.93E-14 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_10150 f7e4f3f3dced135eb2beab33c0568f4b 244 Gene3D G3DSA:3.40.50.1240 18 212 5.1E-11 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG60_00490 9dffa5ed5f79b8a89a2d9bbed94ee833 420 Pfam PF02601 Exonuclease VII, large subunit 137 362 1.2E-45 T 23-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CDG60_00490 9dffa5ed5f79b8a89a2d9bbed94ee833 420 Pfam PF02601 Exonuclease VII, large subunit 305 411 1.1E-10 T 23-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CDG60_00490 9dffa5ed5f79b8a89a2d9bbed94ee833 420 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 413 5.0E-75 T 23-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CDG60_00490 9dffa5ed5f79b8a89a2d9bbed94ee833 420 Pfam PF13742 OB-fold nucleic acid binding domain 6 113 1.5E-15 T 23-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CDG60_17015 8ae061a684358a83163326352e88ab45 204 Pfam PF04116 Fatty acid hydroxylase superfamily 5 154 2.8E-7 T 23-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CDG60_02170 e2eebc5f327e6495e8cb7502c92f204a 248 Pfam PF01203 Type II secretion system (T2SS), protein N 41 203 3.3E-14 T 23-10-2018 IPR022792 Type II secretion system, protein N CDG60_02510 f44a7655bc971beef4028805d21dea4e 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 5.6E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG60_02510 f44a7655bc971beef4028805d21dea4e 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.6E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG60_02510 f44a7655bc971beef4028805d21dea4e 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.6E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG60_02510 f44a7655bc971beef4028805d21dea4e 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 5.6E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG60_02510 f44a7655bc971beef4028805d21dea4e 110 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.0E-20 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG60_02510 f44a7655bc971beef4028805d21dea4e 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 72 1.7E-25 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG60_03190 734b45a32b7f79b60c356e1fc164d283 433 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 389 431 2.4E-8 T 23-10-2018 IPR020011 Motility protein FimV, C-terminal CDG60_03190 734b45a32b7f79b60c356e1fc164d283 433 Gene3D G3DSA:1.20.58.2200 370 432 2.2E-9 T 23-10-2018 IPR038440 FimV, C-terminal domain superfamily CDG60_06065 3b30eadbd638160d1b997aef6e8839d2 337 Gene3D G3DSA:1.10.3720.10 125 336 1.0E-17 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_06065 3b30eadbd638160d1b997aef6e8839d2 337 SUPERFAMILY SSF161098 132 319 3.53E-20 T 23-10-2018 IPR035906 MetI-like superfamily CDG60_06065 3b30eadbd638160d1b997aef6e8839d2 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 336 4.6E-28 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG60_14005 bab7cb567a1bb192868b081078952564 484 Gene3D G3DSA:2.40.50.140 31 118 1.6E-25 T 23-10-2018 CDG60_14005 bab7cb567a1bb192868b081078952564 484 Pfam PF10150 Ribonuclease E/G family 115 387 1.4E-102 T 23-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CDG60_14005 bab7cb567a1bb192868b081078952564 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 1.0E-153 T 23-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CDG60_14005 bab7cb567a1bb192868b081078952564 484 SMART SM00316 37 113 7.2E-13 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG60_14005 bab7cb567a1bb192868b081078952564 484 Pfam PF00575 S1 RNA binding domain 38 111 3.5E-5 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG60_14005 bab7cb567a1bb192868b081078952564 484 SUPERFAMILY SSF50249 39 118 1.26E-18 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG60_00405 01fbbcac2197d0a177efa87747e96b86 97 Pfam PF04956 TrbC/VIRB2 family 13 95 4.1E-10 T 23-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CDG60_04785 fb589d16e92118cc20383dd13c621d15 111 SUPERFAMILY SSF160113 61 109 6.54E-17 T 23-10-2018 IPR036913 YegP-like superfamily CDG60_04785 fb589d16e92118cc20383dd13c621d15 111 SUPERFAMILY SSF160113 1 57 3.4E-18 T 23-10-2018 IPR036913 YegP-like superfamily CDG60_04785 fb589d16e92118cc20383dd13c621d15 111 Gene3D G3DSA:2.30.29.80 1 111 2.1E-48 T 23-10-2018 CDG60_04785 fb589d16e92118cc20383dd13c621d15 111 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 1.4E-21 T 23-10-2018 IPR010879 Domain of unknown function DUF1508 CDG60_04785 fb589d16e92118cc20383dd13c621d15 111 Pfam PF07411 Domain of unknown function (DUF1508) 10 57 2.7E-20 T 23-10-2018 IPR010879 Domain of unknown function DUF1508 CDG60_03080 a154f430f45d845f7f52e9ec6e61c240 206 Gene3D G3DSA:1.10.357.10 12 181 1.7E-17 T 23-10-2018 CDG60_03080 a154f430f45d845f7f52e9ec6e61c240 206 SUPERFAMILY SSF46689 16 78 1.84E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG60_03080 a154f430f45d845f7f52e9ec6e61c240 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 67 1.3E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG60_01320 ed2ddc1cee93483c617420fc79777d15 155 Pfam PF11162 Protein of unknown function (DUF2946) 9 150 3.5E-8 T 23-10-2018 IPR021333 Protein of unknown function DUF2946 CDG60_06735 5b7fd6bf2cc623d16d0caff4280b24be 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG60_06735 5b7fd6bf2cc623d16d0caff4280b24be 456 Gene3D G3DSA:1.20.1250.20 22 455 6.0E-76 T 23-10-2018 CDG60_06735 5b7fd6bf2cc623d16d0caff4280b24be 456 Pfam PF07690 Major Facilitator Superfamily 272 451 6.8E-16 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG60_06735 5b7fd6bf2cc623d16d0caff4280b24be 456 SUPERFAMILY SSF103473 16 448 4.71E-70 T 23-10-2018 IPR036259 MFS transporter superfamily CDG60_06735 5b7fd6bf2cc623d16d0caff4280b24be 456 Pfam PF00083 Sugar (and other) transporter 27 247 7.5E-21 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG60_02955 c9b9d47adc536b95ac8ae05f73cd957a 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 87 260 1.5E-13 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDG60_02955 c9b9d47adc536b95ac8ae05f73cd957a 265 Gene3D G3DSA:3.90.850.10 3 264 4.8E-80 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG60_02955 c9b9d47adc536b95ac8ae05f73cd957a 265 SUPERFAMILY SSF56529 6 262 1.44E-72 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG60_01965 b5a0046fe7b2700ddc2805e5e962a764 181 Pfam PF09335 SNARE associated Golgi protein 43 168 2.2E-18 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG60_17710 6b2bb0b0e838e7d71bc2fc0f60af86cc 246 SUPERFAMILY SSF53474 6 213 1.31E-37 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_17710 6b2bb0b0e838e7d71bc2fc0f60af86cc 246 Pfam PF01738 Dienelactone hydrolase family 20 242 6.8E-43 T 23-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 CDG60_17710 6b2bb0b0e838e7d71bc2fc0f60af86cc 246 Gene3D G3DSA:3.40.50.1820 1 245 3.0E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG60_16245 279f3f32dd102e1e5d94f43186f931a0 153 Pfam PF04657 Putative inner membrane exporter, YdcZ 11 149 2.2E-43 T 23-10-2018 IPR006750 Putative inner membrane exporter, YdcZ CDG60_13715 b8c3b72eefcad9539e1986ce51ed42db 142 Gene3D G3DSA:1.20.120.20 2 139 1.3E-5 T 23-10-2018 CDG60_13715 b8c3b72eefcad9539e1986ce51ed42db 142 SUPERFAMILY SSF58113 8 138 2.88E-5 T 23-10-2018 CDG60_04220 ff6c868b561f10e5b93d013563b120ff 224 Pfam PF04172 LrgB-like family 11 218 1.3E-50 T 23-10-2018 IPR007300 CidB/LrgB family CDG60_09215 048e082373f6a218408fa8ec1e09898f 264 Gene3D G3DSA:1.10.10.10 4 74 9.3E-8 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_04465 6786aa488bfe9fa19fd1364e98e1aa11 154 SUPERFAMILY SSF47240 7 141 6.27E-5 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG60_06510 74225af6ddb70e8cd3a4fb3825d29b60 365 Pfam PF12698 ABC-2 family transporter protein 23 356 2.2E-32 T 23-10-2018 CDG60_13935 3a19a6aee9d0cd1ca8e101e42def3a06 69 Pfam PF14090 Helix-turn-helix domain 5 62 2.1E-15 T 23-10-2018 CDG60_12450 703d051733d5b136727d08a7a5a61e87 260 Pfam PF16142 Domain of unknown function (DUF4850) 60 248 2.3E-43 T 23-10-2018 IPR032322 Protein of unknown function DUF4850 CDG60_09170 8a775bb98911e18c6467f14c493e401f 299 Pfam PF13577 SnoaL-like domain 168 290 1.8E-9 T 23-10-2018 IPR037401 SnoaL-like domain CDG60_09170 8a775bb98911e18c6467f14c493e401f 299 Gene3D G3DSA:3.10.450.50 165 299 2.6E-14 T 23-10-2018 CDG60_09170 8a775bb98911e18c6467f14c493e401f 299 SUPERFAMILY SSF54427 167 296 4.27E-17 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG60_08080 e52acc5b8f853f946baecafaba8607ef 183 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 4.4E-11 T 23-10-2018 IPR005149 Transcription regulator PadR, N-terminal CDG60_08080 e52acc5b8f853f946baecafaba8607ef 183 Gene3D G3DSA:1.10.10.10 1 87 7.9E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG60_08080 e52acc5b8f853f946baecafaba8607ef 183 SUPERFAMILY SSF46785 3 176 1.51E-34 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_08080 e52acc5b8f853f946baecafaba8607ef 183 Pfam PF10400 Virulence activator alpha C-term 91 171 2.6E-15 T 23-10-2018 IPR018309 Transcription regulator PadR, C-terminal CDG60_10385 fb059d2436e3e79e995dc372435ababc 212 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 186 6.5E-33 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG60_08280 10fb7b91e903c931ffa1bdad84578e2b 302 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 138 299 2.0E-48 T 23-10-2018 IPR005642 Lysine exporter LysO CDG60_08280 10fb7b91e903c931ffa1bdad84578e2b 302 Pfam PF03956 Lysine exporter LysO 117 299 1.8E-48 T 23-10-2018 IPR005642 Lysine exporter LysO CDG60_05995 f9e507aea966dd964edbb9a5e5de391e 168 Gene3D G3DSA:3.40.630.30 1 166 6.9E-49 T 23-10-2018 CDG60_05995 f9e507aea966dd964edbb9a5e5de391e 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 3.8E-13 T 23-10-2018 CDG60_05995 f9e507aea966dd964edbb9a5e5de391e 168 SUPERFAMILY SSF55729 3 147 2.74E-29 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG60_10755 79c50bd91de33917bed51902d1ce20c7 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 4.4E-9 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CDG60_01135 0052dc14eab239963a22acdb59d22d67 292 SUPERFAMILY SSF53448 1 280 6.31E-56 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_01135 0052dc14eab239963a22acdb59d22d67 292 Gene3D G3DSA:3.90.550.10 1 290 3.6E-78 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG60_01135 0052dc14eab239963a22acdb59d22d67 292 Pfam PF00483 Nucleotidyl transferase 6 267 3.5E-22 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDG60_01135 0052dc14eab239963a22acdb59d22d67 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 268 6.5E-102 T 23-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CDG60_03835 6c465c03d92b4ce33a9e6984d3168f63 405 Pfam PF04577 Protein of unknown function (DUF563) 155 375 1.3E-29 T 23-10-2018 IPR007657 Glycosyltransferase 61 GO:0016757 CDG60_14775 3213df74959b810d22e13d07930b1b57 277 Pfam PF03412 Peptidase C39 family 63 197 1.5E-15 T 23-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CDG60_14775 3213df74959b810d22e13d07930b1b57 277 Gene3D G3DSA:3.90.70.10 50 206 2.5E-30 T 23-10-2018 CDG60_11000 1556d75e232ae3a66094f13325e8d0d4 99 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 95 5.7E-16 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CDG60_04555 bb2dc401f9b1061650f12bc4272d3ad6 293 Pfam PF10118 Predicted metal-dependent hydrolase 17 279 8.6E-76 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_04555 bb2dc401f9b1061650f12bc4272d3ad6 293 PIRSF PIRSF007580 2 292 8.4E-70 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG60_03795 bbf6d28cc40be038b79a73b7901d2d21 299 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 278 8.2E-43 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_03795 bbf6d28cc40be038b79a73b7901d2d21 299 PIRSF PIRSF026649 1 285 5.9E-63 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_00160 23aac312a668d4e69a84e3c427ffdbcb 309 Gene3D G3DSA:3.30.930.30 2 194 2.6E-56 T 23-10-2018 CDG60_00160 23aac312a668d4e69a84e3c427ffdbcb 309 Pfam PF03389 MobA/MobL family 47 217 2.0E-30 T 23-10-2018 IPR005053 MobA/MobL protein CDG60_11600 613aea36e8b5feb7ad87e82910ffd4b6 403 Pfam PF04143 Sulphur transport 53 379 8.6E-82 T 23-10-2018 IPR007272 Sulphur transport domain CDG60_03065 050155b085ccee64f8b01f540534ec2a 351 SUPERFAMILY SSF159245 89 346 5.62E-6 T 23-10-2018 CDG60_01740 550ded37f5f90facfce2782f5b09773a 195 Pfam PF14300 Domain of unknown function (DUF4375) 74 186 2.3E-19 T 23-10-2018 IPR025402 Domain of unknown function DUF4375 CDG60_15530 ac76aa2bdcb1933699741760d6b84ff6 237 Pfam PF11306 Protein of unknown function (DUF3108) 24 231 2.6E-24 T 23-10-2018 IPR021457 Protein of unknown function DUF3108 CDG60_15665 12766a5a8bd4a1062ea1498ebccdf3dd 72 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 2.4E-19 T 23-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CDG60_15665 12766a5a8bd4a1062ea1498ebccdf3dd 72 Pfam PF02416 mttA/Hcf106 family 4 52 1.0E-13 T 23-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CDG60_15665 12766a5a8bd4a1062ea1498ebccdf3dd 72 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 72 20.335 T 23-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CDG60_16320 500e49ab061540fdc0fa68a79a907dd1 94 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 6 89 7.2E-32 T 23-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane CDG60_16320 500e49ab061540fdc0fa68a79a907dd1 94 Pfam PF12823 Domain of unknown function (DUF3817) 4 90 2.6E-25 T 23-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane CDG60_12030 3a21ef460844243900c26bacef65775e 210 Pfam PF01545 Cation efflux family 23 199 3.4E-13 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG60_12030 3a21ef460844243900c26bacef65775e 210 SUPERFAMILY SSF161111 17 200 1.03E-34 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG60_12030 3a21ef460844243900c26bacef65775e 210 Gene3D G3DSA:1.20.1510.10 19 200 2.2E-8 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG60_15815 e3228e2e21c1695684bb283f874cda77 291 Pfam PF00892 EamA-like transporter family 13 142 4.2E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_15815 e3228e2e21c1695684bb283f874cda77 291 Pfam PF00892 EamA-like transporter family 157 280 9.0E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG60_15815 e3228e2e21c1695684bb283f874cda77 291 SUPERFAMILY SSF103481 186 281 8.89E-14 T 23-10-2018 CDG60_15815 e3228e2e21c1695684bb283f874cda77 291 SUPERFAMILY SSF103481 46 146 7.98E-18 T 23-10-2018 CDG60_16305 1cdab076e1addeaeefa84895e796f54f 378 Pfam PF01594 AI-2E family transporter 17 347 1.5E-47 T 23-10-2018 IPR002549 Transmembrane protein TqsA-like CDG60_01790 0488da8d9bb68a6dc864f63ca2e4a990 178 Pfam PF10881 Protein of unknown function (DUF2726) 37 146 1.6E-10 T 23-10-2018 IPR024402 Domain of unknown function DUF2726 CDG60_12420 9304f071337878631926369623c352bb 257 PIRSF PIRSF006648 1 254 4.2E-19 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG60_12420 9304f071337878631926369623c352bb 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 2.3E-5 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG60_12420 9304f071337878631926369623c352bb 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 2.3E-5 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG60_12420 9304f071337878631926369623c352bb 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 2.3E-5 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG60_12420 9304f071337878631926369623c352bb 257 Pfam PF01061 ABC-2 type transporter 10 219 1.3E-35 T 23-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CDG60_16500 a821b7428c93daf97888db11c223a52c 169 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 73 3.9E-16 T 23-10-2018 IPR013362 Pilus modification type IV, PilV CDG60_09670 4035d00967b3733dc9954e3547695829 144 Pfam PF13554 Bacteriophage related domain of unknown function 33 141 4.0E-10 T 23-10-2018 IPR025395 Protein of unknown function DUF4128 CDG60_01115 1369e7e710972eb74dc57e44788095e2 204 Pfam PF02397 Bacterial sugar transferase 2 176 3.4E-63 T 23-10-2018 IPR003362 Bacterial sugar transferase CDG60_03780 5f297c869a13cdcfae1945a42570ffc7 332 Pfam PF17101 Stealth protein CR1, conserved region 1 4 27 2.8E-7 T 23-10-2018 IPR031358 Stealth protein CR1, conserved region 1 CDG60_03780 5f297c869a13cdcfae1945a42570ffc7 332 Pfam PF11380 Stealth protein CR2, conserved region 2 40 152 2.8E-29 T 23-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 CDG60_08240 df990e853d9dce6302bdd30d8f025bf7 126 Pfam PF07007 Lysozyme inhibitor LprI 34 116 2.6E-5 T 23-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CDG60_02610 3a7325ca0a32c9e1a7d3e7ab6cf99d73 366 SUPERFAMILY SSF56935 33 117 3.3E-5 T 23-10-2018 CDG60_09545 7b48831366680040ae91b4e58cdc371c 292 Pfam PF15931 Domain of unknown function (DUF4747) 13 268 2.5E-51 T 23-10-2018 IPR031832 Protein of unknown function DUF4747 CDG60_16760 1d08969c70e87ad75281d7e3a044b072 222 Pfam PF05137 Fimbrial assembly protein (PilN) 100 187 6.4E-17 T 23-10-2018 IPR007813 Fimbrial assembly PilN CDG60_06525 9926c5f6850e587b7ad1338025c852f9 499 Pfam PF02321 Outer membrane efflux protein 306 478 1.4E-14 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_06525 9926c5f6850e587b7ad1338025c852f9 499 Pfam PF02321 Outer membrane efflux protein 43 283 4.6E-16 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG60_06525 9926c5f6850e587b7ad1338025c852f9 499 SUPERFAMILY SSF56954 19 481 2.62E-50 T 23-10-2018 CDG60_11570 f4042b5a204ad2c0c95eaf3d218c8662 118 SUPERFAMILY SSF103196 5 115 2.62E-5 T 23-10-2018 CDG60_11015 c3e635749ba1bde27c2854c150f95891 270 Pfam PF04403 Paraquat-inducible protein A 82 242 2.3E-52 T 23-10-2018 IPR007498 Intermembrane transport protein PqiA-like CDG60_01305 98ced2603ee4a5a6a176ad979b4dd9fc 85 Gene3D G3DSA:1.10.260.40 19 82 7.4E-17 T 23-10-2018 CDG60_01305 98ced2603ee4a5a6a176ad979b4dd9fc 85 SMART SM00530 26 80 1.9E-6 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_01305 98ced2603ee4a5a6a176ad979b4dd9fc 85 Pfam PF01381 Helix-turn-helix 28 63 2.1E-11 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_01305 98ced2603ee4a5a6a176ad979b4dd9fc 85 SUPERFAMILY SSF47413 19 69 2.44E-12 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_16250 65f111f6dd18bf09c5d3fd016cabb958 432 PIRSF PIRSF006603 1 430 6.0E-61 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_16250 65f111f6dd18bf09c5d3fd016cabb958 432 Pfam PF01554 MatE 229 388 6.3E-31 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_16250 65f111f6dd18bf09c5d3fd016cabb958 432 Pfam PF01554 MatE 3 162 1.7E-28 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_16250 65f111f6dd18bf09c5d3fd016cabb958 432 TIGRFAM TIGR00797 matE: MATE efflux family protein 3 403 3.8E-88 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG60_07960 9b1db02421779839481eeb091e76c9c6 217 Gene3D G3DSA:3.40.109.10 1 217 2.2E-58 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_07960 9b1db02421779839481eeb091e76c9c6 217 SUPERFAMILY SSF55469 4 215 1.31E-61 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG60_07960 9b1db02421779839481eeb091e76c9c6 217 Pfam PF00881 Nitroreductase family 8 193 2.3E-22 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG60_10975 e7df867c8334088b606277ef15a8e73d 280 Pfam PF01435 Peptidase family M48 68 248 1.1E-32 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG60_10975 e7df867c8334088b606277ef15a8e73d 280 Gene3D G3DSA:3.30.2010.10 58 144 1.0E-5 T 23-10-2018 CDG60_05985 fd012e34f48d6ae6810233611c68f5dd 488 Pfam PF03055 Retinal pigment epithelial membrane protein 42 480 4.1E-89 T 23-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 CDG60_00120 4b19049b96716e0f96cfdd4e98e7f668 91 ProDom PD029395 PLASMID MOBILIZATION C MOBILITY CONJUGATION MOBC MOBS ORF94 PROBABLE ORF110 39 91 2.0E-9 T 23-10-2018 CDG60_06570 39b9645055ee22605e65c5ef99074edd 317 PIRSF PIRSF026649 5 293 2.0E-67 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_06570 39b9645055ee22605e65c5ef99074edd 317 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 285 1.4E-39 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG60_07800 5cf02c53a3633402a1c7c515add63059 616 Gene3D G3DSA:3.30.2010.10 81 170 7.0E-13 T 23-10-2018 CDG60_05140 4df203bedebe3d30e8cff1f6ee0c72ee 267 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 71 169 4.7E-5 T 23-10-2018 CDG60_12475 784c51ab63e191a3857bcb0bfedf9ac0 191 Pfam PF11948 Protein of unknown function (DUF3465) 84 191 9.5E-51 T 23-10-2018 IPR021856 Protein of unknown function DUF3465 CDG60_10625 6e53f291b53ae285837119fc0adb69bf 213 Pfam PF01810 LysE type translocator 14 206 1.1E-28 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_13790 da41998dbe8698962728d8fe0a9536bc 523 Pfam PF05552 Conserved TM helix 282 330 9.0E-14 T 23-10-2018 IPR008910 Conserved TM helix CDG60_13790 da41998dbe8698962728d8fe0a9536bc 523 Pfam PF05552 Conserved TM helix 191 236 7.6E-12 T 23-10-2018 IPR008910 Conserved TM helix CDG60_13790 da41998dbe8698962728d8fe0a9536bc 523 Pfam PF05552 Conserved TM helix 101 148 1.0E-15 T 23-10-2018 IPR008910 Conserved TM helix CDG60_10415 42329e334578e9873a7e3022e3c8d52b 819 Pfam PF04453 Organic solvent tolerance protein 346 726 5.9E-81 T 23-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CDG60_10415 42329e334578e9873a7e3022e3c8d52b 819 Pfam PF03968 OstA-like protein 106 238 6.5E-10 T 23-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CDG60_10415 42329e334578e9873a7e3022e3c8d52b 819 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 793 19.15 T 23-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CDG60_08940 1f2bd245e246686adf232244fa736ffe 260 Gene3D G3DSA:1.10.3210.10 59 217 1.2E-9 T 23-10-2018 CDG60_08940 1f2bd245e246686adf232244fa736ffe 260 SUPERFAMILY SSF109604 61 191 1.04E-11 T 23-10-2018 CDG60_15065 a69bba57c518f23a7e8d4e55226679e2 570 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 2 522 6.7E-86 T 23-10-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 CDG60_03470 8f8bbbc366ac489d2c7d0cef536d5fac 90 Pfam PF11112 Pyocin activator protein PrtN 10 81 9.1E-19 T 23-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 CDG60_11120 eabf2a6c403f1d5638d518710a5386b6 139 Pfam PF14078 Domain of unknown function (DUF4259) 2 126 2.8E-28 T 23-10-2018 IPR025355 Protein of unknown function DUF4259 CDG60_16445 f8b354baba315e5e62a455f6a098c278 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 1.2E-5 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG60_16445 f8b354baba315e5e62a455f6a098c278 167 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 5 133 1.2E-25 T 23-10-2018 IPR013362 Pilus modification type IV, PilV CDG60_08925 3b9122716f507e217129111d0ae9c66c 148 Pfam PF03788 LrgA family 27 119 2.7E-26 T 23-10-2018 IPR005538 LrgA/CidA family GO:0016021 CDG60_11490 767f27a7e2362b0255ce6df88ba5c242 295 Pfam PF10670 Domain of unknown function (DUF4198) 18 269 2.7E-31 T 23-10-2018 IPR019613 Protein of unknown function DUF4198 CDG60_13740 ca5e212f33e66ab807cf20b6a1a6c880 365 Pfam PF12358 Protein of unknown function (DUF3644) 42 115 1.6E-12 T 23-10-2018 IPR022104 Protein of unknown function DUF3644 CDG60_00335 33b5936e5ff50835cfb023159ae08954 109 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 3.2E-35 T 23-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CDG60_00335 33b5936e5ff50835cfb023159ae08954 109 SUPERFAMILY SSF54913 4 104 3.04E-36 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDG60_00335 33b5936e5ff50835cfb023159ae08954 109 Gene3D G3DSA:3.30.70.120 2 108 4.8E-39 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG60_07430 bff702c66700254fd5c702ea7f598904 430 SUPERFAMILY SSF56112 79 315 3.15E-22 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG60_07430 bff702c66700254fd5c702ea7f598904 430 Pfam PF03109 ABC1 family 99 217 3.6E-31 T 23-10-2018 IPR004147 UbiB domain CDG60_11160 7d9fcf7d9f3f412c6aa11a8619f24550 335 SUPERFAMILY SSF46785 14 56 9.52E-7 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG60_11160 7d9fcf7d9f3f412c6aa11a8619f24550 335 Pfam PF13280 WYL domain 158 329 1.9E-23 T 23-10-2018 IPR026881 WYL domain CDG60_12260 a80fa795d37842d4d66064a84804e328 120 Pfam PF11367 Protein of unknown function (DUF3168) 6 111 1.7E-10 T 23-10-2018 IPR021508 Tail completion protein CDG60_16695 cf5a68b2f542deafdebd20b52b18e96f 472 SUPERFAMILY SSF53649 299 449 2.03E-7 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG60_16695 cf5a68b2f542deafdebd20b52b18e96f 472 Pfam PF00884 Sulfatase 292 404 4.1E-8 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG60_16695 cf5a68b2f542deafdebd20b52b18e96f 472 Gene3D G3DSA:3.40.720.10 220 468 4.8E-16 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG60_04000 97f2ea28be3c1bb54cac1ae5669218a7 330 Pfam PF10974 Protein of unknown function (DUF2804) 7 329 3.5E-63 T 23-10-2018 IPR021243 Protein of unknown function DUF2804 CDG60_04520 4dafbe6c61bc0d94d515b69b724364e2 150 PIRSF PIRSF004638 1 150 8.3E-50 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 CDG60_04520 4dafbe6c61bc0d94d515b69b724364e2 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 7 148 3.0E-42 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 CDG60_04520 4dafbe6c61bc0d94d515b69b724364e2 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 148 8.9E-49 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 CDG60_16385 e47cd87b4387aa0f3aabb1d396d59d66 606 Pfam PF10577 Uncharacterised protein family UPF0560 81 266 2.6E-6 T 23-10-2018 IPR018890 Uncharacterised protein family FAM171 CDG60_15575 93cf69662d90e92fff4bd0c5263fef0e 180 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 106 148 1.6E-5 T 23-10-2018 IPR018637 Domain of unknown function DUF2059 CDG60_10775 830ced1cfde3a2e670dd7315ff67d94d 145 SUPERFAMILY SSF74653 76 140 5.23E-7 T 23-10-2018 CDG60_10735 4a99402593cb83f80183aeb9ad2ed7f9 180 Pfam PF06127 Protein of unknown function (DUF962) 1 146 2.6E-24 T 23-10-2018 IPR009305 Protein of unknown function DUF962 CDG60_14570 24ff78a245141b3137a121cb9776561d 289 Pfam PF11726 Inovirus Gp2 121 289 7.5E-19 T 23-10-2018 CDG60_14080 5dbc24e50dfa8e24a4b37b4be4e5ed0c 191 Pfam PF02417 Chromate transporter 18 174 8.6E-30 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG60_15475 0b793f3b06606f91c378e5ba221f9682 80 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 1.7E-25 T 23-10-2018 IPR021250 Protein of unknown function DUF2789 CDG60_15475 0b793f3b06606f91c378e5ba221f9682 80 Gene3D G3DSA:1.10.10.1130 1 78 2.2E-26 T 23-10-2018 CDG60_09820 032c7e5a402e93469e1a59ccb47dc3e6 232 Gene3D G3DSA:2.10.109.10 102 225 8.0E-7 T 23-10-2018 CDG60_09820 032c7e5a402e93469e1a59ccb47dc3e6 232 SMART SM00530 10 63 3.9E-5 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG60_09820 032c7e5a402e93469e1a59ccb47dc3e6 232 SUPERFAMILY SSF47413 7 65 2.81E-6 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_09820 032c7e5a402e93469e1a59ccb47dc3e6 232 Gene3D G3DSA:1.10.260.40 8 74 1.1E-10 T 23-10-2018 CDG60_09820 032c7e5a402e93469e1a59ccb47dc3e6 232 Pfam PF00717 Peptidase S24-like 144 207 1.6E-6 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG60_09820 032c7e5a402e93469e1a59ccb47dc3e6 232 SUPERFAMILY SSF51306 92 226 2.27E-18 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG60_15470 e951758794c8f61be092ee9691cb054c 85 Pfam PF10982 Protein of unknown function (DUF2789) 4 75 1.7E-24 T 23-10-2018 IPR021250 Protein of unknown function DUF2789 CDG60_15470 e951758794c8f61be092ee9691cb054c 85 Gene3D G3DSA:1.10.10.1130 1 79 1.7E-25 T 23-10-2018 CDG60_09465 8b1a58c3ee341287f53e44d33f1e02ee 39 Pfam PF10617 Protein of unknown function (DUF2474) 11 38 1.1E-6 T 23-10-2018 IPR018895 Protein of unknown function DUF2474 CDG60_02555 d07072df9adcde0c6afb5abe88c11665 129 Pfam PF03334 Na+/H+ antiporter subunit 12 91 5.5E-24 T 23-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 CDG60_02555 d07072df9adcde0c6afb5abe88c11665 129 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 97 3.3E-24 T 23-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 CDG60_01195 28fe856def0282cecf8eb931620ee5d6 513 Pfam PF06527 TniQ 8 159 1.0E-14 T 23-10-2018 IPR009492 TniQ CDG60_01195 28fe856def0282cecf8eb931620ee5d6 513 Pfam PF15978 Tn7-like transposition protein D 201 295 3.4E-8 T 23-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CDG60_01195 28fe856def0282cecf8eb931620ee5d6 513 Pfam PF15978 Tn7-like transposition protein D 324 447 1.3E-14 T 23-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CDG60_06555 0feb3b20d86790000ce1b6744eb1b44a 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 4.2E-153 T 23-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CDG60_06555 0feb3b20d86790000ce1b6744eb1b44a 411 Pfam PF02687 FtsX-like permease family 298 404 1.0E-12 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDG60_06555 0feb3b20d86790000ce1b6744eb1b44a 411 Pfam PF12704 MacB-like periplasmic core domain 28 240 6.3E-14 T 23-10-2018 IPR025857 MacB-like periplasmic core domain CDG60_02130 b4297875b59d53aeb30c6fbb671c6de9 345 Pfam PF06580 Histidine kinase 156 233 4.2E-25 T 23-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CDG60_02130 b4297875b59d53aeb30c6fbb671c6de9 345 Gene3D G3DSA:3.30.565.10 209 342 2.5E-7 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG60_11480 7db6e6f9d00c003715a74ca27c6ac126 197 Pfam PF16357 Putative PepSY_TM-like 11 196 1.1E-41 T 23-10-2018 IPR032307 Putative PepSY TM-like protein CDG60_02275 aaf180faaa115e47931a2d961ce8e235 159 Pfam PF14539 Domain of unknown function (DUF4442) 13 151 1.9E-15 T 23-10-2018 IPR027961 Protein of unknown function DUF4442 CDG60_02275 aaf180faaa115e47931a2d961ce8e235 159 Gene3D G3DSA:3.10.129.10 8 157 2.0E-27 T 23-10-2018 CDG60_02275 aaf180faaa115e47931a2d961ce8e235 159 SUPERFAMILY SSF54637 11 158 1.84E-19 T 23-10-2018 IPR029069 HotDog domain superfamily CDG60_17340 6e3de6d3c19102285d0e99e4c342531a 191 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 1.7E-24 T 23-10-2018 IPR001727 Gdt1 family CDG60_17340 6e3de6d3c19102285d0e99e4c342531a 191 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 7.3E-18 T 23-10-2018 IPR001727 Gdt1 family CDG60_14000 438cf0bdb1b16697e2687bb47e6989f1 459 Pfam PF06974 Protein of unknown function (DUF1298) 300 442 6.5E-41 T 23-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CDG60_14000 438cf0bdb1b16697e2687bb47e6989f1 459 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 446 1.6E-152 T 23-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CDG60_14000 438cf0bdb1b16697e2687bb47e6989f1 459 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 261 7.8E-67 T 23-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CDG60_03345 e3a19ad45e965c9c22497a2fff79bf21 207 Pfam PF01618 MotA/TolQ/ExbB proton channel family 58 172 6.5E-33 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG60_03790 f94d486e593fa883124f15a794b3626f 257 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 176 3.4E-38 T 23-10-2018 IPR002654 Glycosyl transferase, family 25 CDG60_03520 6f6b4c90701d9e2e150cd76ee5f97fa4 38 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 37 1.2E-6 T 23-10-2018 IPR010260 DNA-binding transcriptional activator AlpA CDG60_09745 5479d5d613c777efa085c96a6ec0b77b 145 Gene3D G3DSA:3.40.960.10 31 133 4.1E-6 T 23-10-2018 CDG60_09810 d3ad347da60be6cadb60552d30856c2a 106 Gene3D G3DSA:1.10.260.40 7 86 4.8E-5 T 23-10-2018 CDG60_09810 d3ad347da60be6cadb60552d30856c2a 106 SUPERFAMILY SSF47413 8 86 1.04E-14 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG60_11935 c3dddd3b41b6447c0be21edf12b5d3e1 88 Pfam PF07023 Protein of unknown function (DUF1315) 4 79 4.4E-30 T 23-10-2018 IPR009749 Protein of unknown function DUF1315 CDG60_13695 bc2820b5290c4a2b721a32fafe74dbac 186 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 174 4.5E-30 T 23-10-2018 IPR018639 Domain of unknown function DUF2062 CDG60_14155 34e1c50c63fab0871885c9bdf42340c7 128 SUPERFAMILY SSF55298 1 127 8.8E-32 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_14155 34e1c50c63fab0871885c9bdf42340c7 128 Gene3D G3DSA:3.30.1330.40 2 128 4.6E-34 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG60_14155 34e1c50c63fab0871885c9bdf42340c7 128 Pfam PF01042 Endoribonuclease L-PSP 15 126 1.2E-22 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG60_03855 dfd9710da441611d4a7e3585eef1ef66 254 Pfam PF13803 Domain of unknown function (DUF4184) 1 207 9.5E-36 T 23-10-2018 IPR025238 Protein of unknown function DUF4184 CDG60_17200 56ea08fdd1706ce9ad3d3763bac67941 109 Pfam PF04341 Protein of unknown function, DUF485 11 96 1.3E-31 T 23-10-2018 IPR007436 Protein of unknown function DUF485 CDG60_15225 5c22c0785f9b15c2ad7fdd9486393980 104 Pfam PF13511 Domain of unknown function (DUF4124) 15 69 2.3E-10 T 23-10-2018 IPR025392 Domain of unknown function DUF4124 CDG60_09315 3521cb1faee514de04cc3f5b43adf095 109 Gene3D G3DSA:1.10.238.10 24 99 2.5E-8 T 23-10-2018 CDG60_09315 3521cb1faee514de04cc3f5b43adf095 109 SUPERFAMILY SSF47473 22 95 2.88E-9 T 23-10-2018 IPR011992 EF-hand domain pair CDG60_00065 756f23e5f91e8c19d79140f0b3443feb 298 Pfam PF15969 Intracellular sensor of Lambda phage, Abi component 27 247 5.4E-15 T 23-10-2018 IPR031894 Abi component, intracellular sensor of Lambda phage RexA CDG60_13300 580fe9b731fa93903a38bca55203dcb6 539 Pfam PF01384 Phosphate transporter family 81 528 8.2E-85 T 23-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CDG60_17250 4cb1c2c86f7a28c7ed02bdc0964ded2e 193 Pfam PF05656 Protein of unknown function (DUF805) 25 141 8.2E-18 T 23-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CDG60_05395 19f77db849d84f13052c4c527452bbbb 187 Pfam PF14345 GDYXXLXY protein 15 167 2.0E-22 T 23-10-2018 IPR025833 GDYXXLXY protein CDG60_16645 c173ef08c6369475a81939d5f3ab4f29 244 Pfam PF11185 Protein of unknown function (DUF2971) 87 173 6.1E-7 T 23-10-2018 IPR021352 Protein of unknown function DUF2971 CDG60_13235 33d327be3bcb42049bbf6b061b96f45f 827 Pfam PF02687 FtsX-like permease family 730 817 2.8E-8 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDG60_02705 89cea5068aba40f3c4afdd1ff1b618bd 151 Gene3D G3DSA:2.40.128.520 24 151 3.1E-10 T 23-10-2018 CDG60_02705 89cea5068aba40f3c4afdd1ff1b618bd 151 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 28 149 2.1E-15 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG60_12900 c33c7386eec1682ee9f4a2b1387120b6 882 ProSitePatterns PS00018 EF-hand calcium-binding domain. 690 702 - T 23-10-2018 IPR018247 EF-Hand 1, calcium-binding site CDG60_13040 49fb431fe4abfd778f51a5381dad2698 628 Pfam PF13387 Domain of unknown function (DUF4105) 122 292 7.5E-58 T 23-10-2018 IPR025178 Domain of unknown function DUF4105 CDG60_04790 70d65da4838199b544f7782eae000c91 197 Pfam PF11159 Protein of unknown function (DUF2939) 13 101 3.4E-22 T 23-10-2018 IPR021330 Protein of unknown function DUF2939 CDG60_13035 562026da8dbe878b750dd0c2d6bbd01b 235 Pfam PF06912 Protein of unknown function (DUF1275) 19 222 1.1E-29 T 23-10-2018 IPR010699 Protein of unknown function DUF1275 CDG60_10900 6d935b29c782280773969dbd87d714d8 215 Pfam PF01810 LysE type translocator 13 207 1.5E-19 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_08920 8fa431279e80f656baec620ac235a18d 233 Pfam PF04172 LrgB-like family 14 225 2.2E-63 T 23-10-2018 IPR007300 CidB/LrgB family CDG60_17695 d41e32faadc0996b98901d84ae9ef529 156 Pfam PF04463 Protein of unknown function (DUF523) 3 145 2.6E-39 T 23-10-2018 IPR007553 Domain of unknown function DUF523 CDG60_09775 70412c7885e0f043019968ddd10d14e2 131 Pfam PF04480 Protein of unknown function (DUF559) 30 128 1.6E-5 T 23-10-2018 IPR007569 Protein of unknown function DUF559 CDG60_09775 70412c7885e0f043019968ddd10d14e2 131 Gene3D G3DSA:3.40.960.10 29 131 6.7E-11 T 23-10-2018 CDG60_13530 5841eeb2b3d73ae49d346569c7926710 186 Pfam PF14317 YcxB-like protein 108 177 5.1E-17 T 23-10-2018 IPR025588 YcxB-like protein CDG60_12960 c8b020313d949b6cac59ab3ec5f2030f 393 SUPERFAMILY SSF56935 34 385 2.49E-8 T 23-10-2018 CDG60_05630 926f161143fb79d9ef4bb5f1327fbeb6 215 Pfam PF07290 Protein of unknown function (DUF1449) 10 213 4.1E-58 T 23-10-2018 IPR010840 Protein of unknown function DUF1449 CDG60_13755 3ff3afd3a51ef6a633414a5cf3ad2e97 207 Pfam PF01810 LysE type translocator 17 203 1.2E-30 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_16730 af5a14668ad85f8918f379d98a448410 275 Gene3D G3DSA:3.30.70.1070 87 183 2.3E-9 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG60_16125 ddbea0ca315684bf1b8435999f7055f7 227 Pfam PF02470 MlaD protein 38 164 5.3E-29 T 23-10-2018 IPR003399 Mce/MlaD CDG60_17825 81e1c9f8b6ed9a238204b4b4aba28958 439 SUPERFAMILY SSF52833 241 422 1.05E-6 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG60_08395 403156f658a3dd1aeb3e597e9393edf0 450 Pfam PF02386 Cation transport protein 47 432 4.9E-54 T 23-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CDG60_11150 1940ba57df0585a2271a37da2d0ce832 203 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 50 150 1.5E-5 T 23-10-2018 IPR007296 Domain of unknown function DUF403 CDG60_06190 9457b33c6e79d52e17c07aeb1007cbaa 494 Pfam PF02486 Replication initiation factor 262 430 2.1E-24 T 23-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 CDG60_06025 f9a329da7278a24495ce3b38a0c2ee3f 228 Pfam PF04972 BON domain 61 113 4.3E-12 T 23-10-2018 IPR007055 BON domain CDG60_03230 1fcae5441b58606430ad2f86451c7597 81 Pfam PF04102 SlyX 16 81 4.1E-16 T 23-10-2018 IPR007236 SlyX CDG60_10055 7c13bbef40d927f58d19c73fbbcd3fb7 155 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 28 142 1.8E-33 T 23-10-2018 IPR008769 Poly granule associated CDG60_06930 70c0e17dcc592586267f6af4aa4ae7bb 124 Pfam PF16137 Domain of unknown function (DUF4845) 33 112 1.6E-12 T 23-10-2018 IPR032314 Protein of unknown function DUF4845 CDG60_17810 fa0deed1538d4d47fe361252abb7a3fb 247 Pfam PF01925 Sulfite exporter TauE/SafE 6 238 2.0E-28 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_01700 88fdc3b7549fe8b04caa8277f180a756 403 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 118 349 1.2E-28 T 23-10-2018 IPR018713 Domain of unknown function DUF2236 CDG60_08195 b6dddd900bf597d8cd3372752125c7b0 408 Pfam PF00487 Fatty acid desaturase 133 341 2.3E-28 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG60_08710 95c3299c0b8d1200106adc6db48e14d1 145 Pfam PF16459 Phage tail assembly chaperone, TAC 12 109 2.8E-9 T 23-10-2018 IPR024410 Phage tail assembly chaperone protein, TAC CDG60_10040 6e926172e9fbf6e5c47c6cde21d30f85 290 Pfam PF10977 Protein of unknown function (DUF2797) 47 285 4.4E-92 T 23-10-2018 IPR021246 Protein of unknown function DUF2797 CDG60_13950 9f004c3c7b23c5aff7e5768ae0527268 709 Pfam PF13148 Protein of unknown function (DUF3987) 273 619 1.5E-48 T 23-10-2018 IPR025048 Protein of unknown function DUF3987) CDG60_06550 085b92fb96af5aa7dee07bd6955be6e0 189 Pfam PF07238 PilZ domain 109 182 3.9E-7 T 23-10-2018 IPR009875 PilZ domain GO:0035438 CDG60_02785 14434b59a6cc7f991aa2d25f337dff3c 342 Pfam PF13271 Domain of unknown function (DUF4062) 7 85 3.5E-12 T 23-10-2018 IPR025139 Domain of unknown function DUF4062 CDG60_03480 19a51a56af797eac84a990995c514c50 289 Pfam PF11726 Inovirus Gp2 121 289 7.9E-19 T 23-10-2018 CDG60_09945 5525b23e17c24b0bfe5cefdb8b5a9ba2 125 Pfam PF11042 Protein of unknown function (DUF2750) 20 111 1.3E-15 T 23-10-2018 IPR021284 Protein of unknown function DUF2750 CDG60_03535 5df007efee3c75ac2a4b7b3a78a2c2d4 357 Pfam PF11726 Inovirus Gp2 145 342 6.0E-19 T 23-10-2018 CDG60_14915 fb1d771e3b714dc182307cda03033a9b 905 Pfam PF10101 Predicted membrane protein (DUF2339) 168 898 1.6E-78 T 23-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane CDG60_01275 afa56d8f4b0f09e13dd4e67c716d4972 260 Pfam PF01925 Sulfite exporter TauE/SafE 5 253 4.5E-37 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG60_10995 f92fcbd2e8f01052cf16e9ad72518c7e 247 Pfam PF03591 AzlC protein 29 175 2.9E-35 T 23-10-2018 IPR011606 Branched-chain amino acid transport, permease CDG60_07490 1f4e51fcc1c0daa70d494ab41bc6c859 1506 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1159 1506 1.9E-44 T 23-10-2018 IPR007452 Translocation and assembly module TamB CDG60_04955 7f23e519afd93dd105e122bfec51a1b7 264 Pfam PF02616 Segregation and condensation protein ScpA 53 143 3.0E-14 T 23-10-2018 IPR003768 Segregation and condensation protein A CDG60_03950 47949ead3366027152bd11f08298cf71 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 446 1.0E-117 T 23-10-2018 IPR003846 Uncharacterised protein family UPF0061 CDG60_06795 29baa15155bc863511fcd35278962f7a 199 Pfam PF01810 LysE type translocator 13 199 1.5E-35 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG60_13030 c7ddb3d9495fb470dc89822eb009310b 225 Pfam PF06912 Protein of unknown function (DUF1275) 8 215 8.2E-33 T 23-10-2018 IPR010699 Protein of unknown function DUF1275 CDG60_04505 64d722df967fc1d941a2cdab14193b18 369 Pfam PF01757 Acyltransferase family 4 349 2.1E-33 T 23-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CDG60_17300 874dc05f9a16a7bbd2d7e002ab009809 277 Pfam PF16956 Putative general bacterial porin 5 277 1.0E-22 T 23-10-2018 IPR031593 Putative general bacterial porin CDG60_14630 59861d432f787dddd6ffb6445689d0bb 193 Pfam PF13548 Domain of unknown function (DUF4126) 7 180 4.3E-50 T 23-10-2018 IPR025196 Domain of unknown function DUF4126 CDG60_12245 1f32e557e6e42180c7669025024d9b2b 215 Pfam PF10543 ORF6N domain 10 96 6.6E-20 T 23-10-2018 IPR018873 KilA-N, DNA-binding domain CDG60_16430 05b94957e09bd7552b8de8d37bb99da8 1320 SUPERFAMILY SSF50998 766 1154 4.71E-6 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily