locus-tag class description BEN74_00015 PF01051 Initiator Replication protein BEN74_00050 PF00005 ABC transporter BEN74_00065 PF13737 Transposase DDE domain BEN74_00110 PF00581 Rhodanese-like domain BEN74_00115 PF01925 Sulfite exporter TauE/SafE BEN74_00120 PF00753 Metallo-beta-lactamase superfamily BEN74_00130 PF04143 Sulphur transport BEN74_00160 PF00589 Phage integrase family BEN74_00160 PF13356 Arm DNA-binding domain BEN74_00165 PF04233 Phage Mu protein F like protein BEN74_00190 PF00717 Peptidase S24-like BEN74_00190 PF01726 LexA DNA binding domain BEN74_00195 PF00817 impB/mucB/samB family BEN74_00195 PF11799 impB/mucB/samB family C-terminal domain BEN74_00195 PF13438 Domain of unknown function (DUF4113) BEN74_00235 PF07664 Ferrous iron transport protein B C terminus BEN74_00235 PF02421 Ferrous iron transport protein B BEN74_00235 PF07670 Nucleoside recognition BEN74_00245 PF00239 Resolvase, N terminal domain BEN74_00245 PF02796 Helix-turn-helix domain of resolvase BEN74_00255 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BEN74_00260 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BEN74_00285 PF13737 Transposase DDE domain BEN74_00295 PF13737 Transposase DDE domain BEN74_00305 PF02384 N-6 DNA Methylase BEN74_00305 PF12161 HsdM N-terminal domain BEN74_00340 PF13614 AAA domain BEN74_00350 PF13737 Transposase DDE domain BEN74_00370 PF13635 Domain of unknown function (DUF4143) BEN74_00370 PF13173 AAA domain BEN74_00385 PF01051 Initiator Replication protein BEN74_00390 PF17762 HTH domain found in ParB protein BEN74_00390 PF02195 ParB-like nuclease domain BEN74_00395 PF13614 AAA domain BEN74_00420 PF01051 Initiator Replication protein BEN74_00425 PF01051 Initiator Replication protein BEN74_00455 PF01636 Phosphotransferase enzyme family BEN74_00460 PF00239 Resolvase, N terminal domain BEN74_00460 PF02796 Helix-turn-helix domain of resolvase BEN74_00465 PF02522 Aminoglycoside 3-N-acetyltransferase BEN74_00505 PF01051 Initiator Replication protein BEN74_00535 PF00756 Putative esterase BEN74_00550 PF08240 Alcohol dehydrogenase GroES-like domain BEN74_00550 PF00107 Zinc-binding dehydrogenase BEN74_00555 PF02583 Metal-sensitive transcriptional repressor BEN74_00565 PF01381 Helix-turn-helix BEN74_00585 PF01381 Helix-turn-helix BEN74_00590 PF05973 Phage derived protein Gp49-like (DUF891) BEN74_00595 PF02909 Tetracyclin repressor-like, C-terminal domain BEN74_00595 PF00440 Bacterial regulatory proteins, tetR family BEN74_00600 PF07690 Major Facilitator Superfamily BEN74_00615 PF03389 MobA/MobL family BEN74_00630 PF00893 Small Multidrug Resistance protein BEN74_00645 PF03389 MobA/MobL family BEN74_00655 PF00300 Histidine phosphatase superfamily (branch 1) BEN74_00670 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system BEN74_00695 PF01381 Helix-turn-helix BEN74_00700 PF05973 Phage derived protein Gp49-like (DUF891) BEN74_00730 PF01051 Initiator Replication protein BEN74_00760 PF17841 BID domain of Bartonella effector protein (Bep) BEN74_00760 PF03389 MobA/MobL family BEN74_00760 PF01443 Viral (Superfamily 1) RNA helicase BEN74_00770 PF01051 Initiator Replication protein BEN74_00780 PF00144 Beta-lactamase BEN74_00790 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system BEN74_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN74_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN74_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN74_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN74_00815 PF00809 Pterin binding enzyme BEN74_00825 PF16793 RepB DNA-primase from phage plasmid BEN74_00825 PF03389 MobA/MobL family BEN74_00835 PF01051 Initiator Replication protein BEN74_00855 PF05973 Phage derived protein Gp49-like (DUF891) BEN74_00865 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BEN74_00870 PF01636 Phosphotransferase enzyme family BEN74_00885 PF01051 Initiator Replication protein BEN74_00930 PF01381 Helix-turn-helix BEN74_00935 PF05973 Phage derived protein Gp49-like (DUF891) BEN74_00945 PF03389 MobA/MobL family BEN74_00965 PF00144 Beta-lactamase BEN74_00990 PF00437 Type II/IV secretion system protein BEN74_00995 PF03743 Bacterial conjugation TrbI-like protein BEN74_01035 PF13614 AAA domain BEN74_01105 PF03389 MobA/MobL family BEN74_01105 PF01443 Viral (Superfamily 1) RNA helicase BEN74_01105 PF17841 BID domain of Bartonella effector protein (Bep) BEN74_01135 PF01636 Phosphotransferase enzyme family BEN74_01140 PF00665 Integrase core domain BEN74_01140 PF13936 Helix-turn-helix domain BEN74_01145 PF00753 Metallo-beta-lactamase superfamily BEN74_01155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEN74_01160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEN74_01165 PF03091 CutA1 divalent ion tolerance protein BEN74_01170 PF00166 Chaperonin 10 Kd subunit BEN74_01175 PF00118 TCP-1/cpn60 chaperonin family BEN74_01195 PF13936 Helix-turn-helix domain BEN74_01195 PF00665 Integrase core domain BEN74_01200 PF13936 Helix-turn-helix domain BEN74_01200 PF00665 Integrase core domain BEN74_01205 PF02796 Helix-turn-helix domain of resolvase BEN74_01205 PF00239 Resolvase, N terminal domain BEN74_01220 PF00565 Staphylococcal nuclease homologue BEN74_01245 PF01464 Transglycosylase SLT domain BEN74_01245 PF10145 Phage-related minor tail protein BEN74_01245 PF01551 Peptidase family M23 BEN74_01260 PF01464 Transglycosylase SLT domain BEN74_01260 PF10145 Phage-related minor tail protein BEN74_01260 PF01551 Peptidase family M23 BEN74_01270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN74_01270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN74_01275 PF00440 Bacterial regulatory proteins, tetR family BEN74_01285 PF00285 Citrate synthase, C-terminal domain BEN74_01330 PF07969 Amidohydrolase family BEN74_01340 PF00875 DNA photolyase BEN74_01340 PF03441 FAD binding domain of DNA photolyase BEN74_01355 PF02321 Outer membrane efflux protein BEN74_01365 PF00873 AcrB/AcrD/AcrF family BEN74_01375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN74_01380 PF00005 ABC transporter BEN74_01395 PF00892 EamA-like transporter family BEN74_01435 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system BEN74_01445 PF00106 short chain dehydrogenase BEN74_01450 PF00484 Carbonic anhydrase BEN74_01460 PF07995 Glucose / Sorbosone dehydrogenase BEN74_01505 PF10549 ORF11CD3 domain BEN74_01505 PF09669 Phage regulatory protein Rha (Phage_pRha) BEN74_01550 PF00593 TonB dependent receptor BEN74_01550 PF07715 TonB-dependent Receptor Plug Domain BEN74_01565 PF01047 MarR family BEN74_01590 PF00892 EamA-like transporter family BEN74_01670 PF00872 Transposase, Mutator family BEN74_01690 PF12832 MFS_1 like family BEN74_01700 PF02785 Biotin carboxylase C-terminal domain BEN74_01700 PF00289 Biotin carboxylase, N-terminal domain BEN74_01700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN74_01705 PF00364 Biotin-requiring enzyme BEN74_01710 PF01220 Dehydroquinase class II BEN74_01750 PF04143 Sulphur transport BEN74_01760 PF04273 Putative phosphatase (DUF442) BEN74_01760 PF00753 Metallo-beta-lactamase superfamily BEN74_01765 PF12697 Alpha/beta hydrolase family BEN74_01780 PF01425 Amidase BEN74_01830 PF13737 Transposase DDE domain BEN74_01860 PF12161 HsdM N-terminal domain BEN74_01860 PF02384 N-6 DNA Methylase BEN74_01895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_01895 PF03466 LysR substrate binding domain BEN74_01915 PF01925 Sulfite exporter TauE/SafE BEN74_01920 PF01613 Flavin reductase like domain BEN74_01925 PF08267 Cobalamin-independent synthase, N-terminal domain BEN74_01925 PF01717 Cobalamin-independent synthase, Catalytic domain BEN74_01935 PF07715 TonB-dependent Receptor Plug Domain BEN74_01935 PF00593 TonB dependent receptor BEN74_01945 PF04542 Sigma-70 region 2 BEN74_01945 PF08281 Sigma-70, region 4 BEN74_01950 PF12146 Serine aminopeptidase, S33 BEN74_01955 PF12146 Serine aminopeptidase, S33 BEN74_01960 PF06719 AraC-type transcriptional regulator N-terminus BEN74_01960 PF12833 Helix-turn-helix domain BEN74_01965 PF13193 AMP-binding enzyme C-terminal domain BEN74_01965 PF00501 AMP-binding enzyme BEN74_01970 PF17925 Tetracyclin repressor-like, C-terminal domain BEN74_01970 PF00440 Bacterial regulatory proteins, tetR family BEN74_01975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_01975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_01975 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_01980 PF01039 Carboxyl transferase domain BEN74_01985 PF00378 Enoyl-CoA hydratase/isomerase BEN74_01990 PF00364 Biotin-requiring enzyme BEN74_01990 PF00289 Biotin carboxylase, N-terminal domain BEN74_01990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN74_01990 PF02785 Biotin carboxylase C-terminal domain BEN74_01995 PF00682 HMGL-like BEN74_02000 PF01144 Coenzyme A transferase BEN74_02005 PF01144 Coenzyme A transferase BEN74_02010 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BEN74_02010 PF18381 YcaO cyclodehydratase C-terminal domain BEN74_02020 PF07694 5TMR of 5TMR-LYT BEN74_02020 PF00990 Diguanylate cyclase, GGDEF domain BEN74_02025 PF00486 Transcriptional regulatory protein, C terminal BEN74_02025 PF00072 Response regulator receiver domain BEN74_02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_02030 PF02702 Osmosensitive K+ channel His kinase sensor domain BEN74_02030 PF13493 Domain of unknown function (DUF4118) BEN74_02030 PF13492 GAF domain BEN74_02030 PF00512 His Kinase A (phospho-acceptor) domain BEN74_02035 PF02669 K+-transporting ATPase, c chain BEN74_02045 PF03814 Potassium-transporting ATPase A subunit BEN74_02050 PF02673 Bacitracin resistance protein BacA BEN74_02055 PF02677 Epoxyqueuosine reductase QueH BEN74_02060 PF01553 Acyltransferase BEN74_02070 PF00501 AMP-binding enzyme BEN74_02070 PF13193 AMP-binding enzyme C-terminal domain BEN74_02075 PF00155 Aminotransferase class I and II BEN74_02075 PF00392 Bacterial regulatory proteins, gntR family BEN74_02085 PF07690 Major Facilitator Superfamily BEN74_02100 PF03466 LysR substrate binding domain BEN74_02100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_02105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEN74_02105 PF13378 Enolase C-terminal domain-like BEN74_02110 PF02426 Muconolactone delta-isomerase BEN74_02115 PF00775 Dioxygenase BEN74_02115 PF04444 Catechol dioxygenase N terminus BEN74_02120 PF00355 Rieske [2Fe-2S] domain BEN74_02120 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BEN74_02125 PF00866 Ring hydroxylating beta subunit BEN74_02130 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN74_02130 PF00970 Oxidoreductase FAD-binding domain BEN74_02130 PF00175 Oxidoreductase NAD-binding domain BEN74_02135 PF00106 short chain dehydrogenase BEN74_02140 PF03594 Benzoate membrane transport protein BEN74_02145 PF01144 Coenzyme A transferase BEN74_02150 PF01144 Coenzyme A transferase BEN74_02155 PF02803 Thiolase, C-terminal domain BEN74_02155 PF00108 Thiolase, N-terminal domain BEN74_02160 PF12146 Serine aminopeptidase, S33 BEN74_02165 PF02515 CoA-transferase family III BEN74_02170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_02170 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_02170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_02175 PF03466 LysR substrate binding domain BEN74_02175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_02180 PF02146 Sir2 family BEN74_02190 PF00872 Transposase, Mutator family BEN74_02200 PF03466 LysR substrate binding domain BEN74_02200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_02205 PF13419 Haloacid dehalogenase-like hydrolase BEN74_02210 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEN74_02210 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEN74_02215 PF00108 Thiolase, N-terminal domain BEN74_02215 PF02803 Thiolase, C-terminal domain BEN74_02220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_02220 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_02220 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN74_02220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_02225 PF08360 QacR-like protein, C-terminal region BEN74_02225 PF00440 Bacterial regulatory proteins, tetR family BEN74_02240 PF13737 Transposase DDE domain BEN74_02255 PF00376 MerR family regulatory protein BEN74_02255 PF09278 MerR, DNA binding BEN74_02260 PF00403 Heavy-metal-associated domain BEN74_02265 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_02275 PF01740 STAS domain BEN74_02275 PF00916 Sulfate permease family BEN74_02280 PF00375 Sodium:dicarboxylate symporter family BEN74_02290 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BEN74_02295 PF00924 Mechanosensitive ion channel BEN74_02310 PF12762 ISXO2-like transposase domain BEN74_02320 PF07993 Male sterility protein BEN74_02320 PF00668 Condensation domain BEN74_02320 PF13193 AMP-binding enzyme C-terminal domain BEN74_02320 PF00501 AMP-binding enzyme BEN74_02320 PF00550 Phosphopantetheine attachment site BEN74_02325 PF13411 MerR HTH family regulatory protein BEN74_02330 PF00144 Beta-lactamase BEN74_02340 PF03466 LysR substrate binding domain BEN74_02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_02385 PF00005 ABC transporter BEN74_02385 PF00664 ABC transporter transmembrane region BEN74_02395 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN74_02395 PF12833 Helix-turn-helix domain BEN74_02400 PF01597 Glycine cleavage H-protein BEN74_02405 PF07690 Major Facilitator Superfamily BEN74_02410 PF00437 Type II/IV secretion system protein BEN74_02415 PF00793 DAHP synthetase I family BEN74_02420 PF12848 ABC transporter BEN74_02420 PF16326 ABC transporter C-terminal domain BEN74_02420 PF00005 ABC transporter BEN74_02425 PF00487 Fatty acid desaturase BEN74_02430 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN74_02430 PF00175 Oxidoreductase NAD-binding domain BEN74_02430 PF00970 Oxidoreductase FAD-binding domain BEN74_02435 PF00107 Zinc-binding dehydrogenase BEN74_02435 PF08240 Alcohol dehydrogenase GroES-like domain BEN74_02440 PF13091 PLD-like domain BEN74_02455 PF00155 Aminotransferase class I and II BEN74_02460 PF00892 EamA-like transporter family BEN74_02495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEN74_02495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN74_02500 PF00106 short chain dehydrogenase BEN74_02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_02515 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_02515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_02520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_02520 PF03466 LysR substrate binding domain BEN74_02525 PF00565 Staphylococcal nuclease homologue BEN74_02530 PF01116 Fructose-bisphosphate aldolase class-II BEN74_02540 PF00162 Phosphoglycerate kinase BEN74_02550 PF02545 Maf-like protein BEN74_02565 PF00487 Fatty acid desaturase BEN74_02570 PF12833 Helix-turn-helix domain BEN74_02570 PF12852 Cupin BEN74_02575 PF02684 Lipid-A-disaccharide synthetase BEN74_02580 PF01925 Sulfite exporter TauE/SafE BEN74_02585 PF00793 DAHP synthetase I family BEN74_02595 PF02542 YgbB family BEN74_02605 PF04237 YjbR BEN74_02610 PF01266 FAD dependent oxidoreductase BEN74_02625 PF01264 Chorismate synthase BEN74_02630 PF05175 Methyltransferase small domain BEN74_02645 PF03109 ABC1 family BEN74_02650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_02650 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_02650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_02655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_02655 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_02655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_02660 PF00583 Acetyltransferase (GNAT) family BEN74_02710 PF00448 SRP54-type protein, GTPase domain BEN74_02710 PF02881 SRP54-type protein, helical bundle domain BEN74_02755 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_02770 PF01434 Peptidase family M41 BEN74_02770 PF17862 AAA+ lid domain BEN74_02770 PF00004 ATPase family associated with various cellular activities (AAA) BEN74_02780 PF05166 YcgL domain BEN74_02785 PF01612 3'-5' exonuclease BEN74_02785 PF00570 HRDC domain BEN74_02790 PF13662 Toprim domain BEN74_02790 PF02132 RecR protein BEN74_02795 PF02575 YbaB/EbfC DNA-binding family BEN74_02800 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN74_02810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN74_02810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN74_02820 PF01230 HIT domain BEN74_02825 PF00267 Gram-negative porin BEN74_02835 PF01654 Cytochrome bd terminal oxidase subunit I BEN74_02840 PF02322 Cytochrome bd terminal oxidase subunit II BEN74_02845 PF08173 Membrane bound YbgT-like protein BEN74_02855 PF12561 ToxR activated gene A lipoprotein domain BEN74_02855 PF00041 Fibronectin type III domain BEN74_02870 PF00459 Inositol monophosphatase family BEN74_02875 PF13419 Haloacid dehalogenase-like hydrolase BEN74_02880 PF01479 S4 domain BEN74_02885 PF00154 recA bacterial DNA recombination protein BEN74_02890 PF02631 RecX family BEN74_02905 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_02905 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BEN74_02910 PF07977 FabA-like domain BEN74_02915 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_02915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BEN74_02925 PF07244 Surface antigen variable number repeat BEN74_02925 PF01103 Surface antigen BEN74_02930 PF17820 PDZ domain BEN74_02930 PF02163 Peptidase family M50 BEN74_02930 PF13180 PDZ domain BEN74_02935 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BEN74_02935 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BEN74_02935 PF13288 DXP reductoisomerase C-terminal domain BEN74_02945 PF01255 Putative undecaprenyl diphosphate synthase BEN74_02950 PF01765 Ribosome recycling factor BEN74_02955 PF00696 Amino acid kinase family BEN74_02960 PF18693 TRAM domain BEN74_02960 PF00919 Uncharacterized protein family UPF0004 BEN74_02960 PF04055 Radical SAM superfamily BEN74_02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_02965 PF00512 His Kinase A (phospho-acceptor) domain BEN74_02965 PF00989 PAS fold BEN74_02970 PF02954 Bacterial regulatory protein, Fis family BEN74_02970 PF00072 Response regulator receiver domain BEN74_02970 PF00158 Sigma-54 interaction domain BEN74_02980 PF01098 Cell cycle protein BEN74_02985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BEN74_02990 PF04977 Septum formation initiator BEN74_02995 PF00113 Enolase, C-terminal TIM barrel domain BEN74_02995 PF03952 Enolase, N-terminal domain BEN74_03000 PF00793 DAHP synthetase I family BEN74_03005 PF00117 Glutamine amidotransferase class-I BEN74_03005 PF06418 CTP synthase N-terminus BEN74_03015 PF03466 LysR substrate binding domain BEN74_03015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_03030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN74_03030 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_03040 PF12697 Alpha/beta hydrolase family BEN74_03045 PF09234 Domain of unknown function (DUF1963) BEN74_03050 PF03466 LysR substrate binding domain BEN74_03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_03055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_03055 PF03466 LysR substrate binding domain BEN74_03060 PF00557 Metallopeptidase family M24 BEN74_03065 PF05525 Branched-chain amino acid transport protein BEN74_03085 PF00324 Amino acid permease BEN74_03090 PF01037 Lrp/AsnC ligand binding domain BEN74_03120 PF03180 NLPA lipoprotein BEN74_03125 PF00005 ABC transporter BEN74_03125 PF09383 NIL domain BEN74_03130 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_03160 PF06434 Aconitate hydratase 2 N-terminus BEN74_03160 PF11791 Aconitate B N-terminal domain BEN74_03160 PF00330 Aconitase family (aconitate hydratase) BEN74_03185 PF17243 POTRA domain TamA domain 1 BEN74_03185 PF01103 Surface antigen BEN74_03185 PF07244 Surface antigen variable number repeat BEN74_03190 PF07690 Major Facilitator Superfamily BEN74_03195 PF03232 Ubiquinone biosynthesis protein COQ7 BEN74_03200 PF13508 Acetyltransferase (GNAT) domain BEN74_03220 PF03109 ABC1 family BEN74_03225 PF00899 ThiF family BEN74_03230 PF13193 AMP-binding enzyme C-terminal domain BEN74_03230 PF00501 AMP-binding enzyme BEN74_03235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_03235 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_03235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_03240 PF00106 short chain dehydrogenase BEN74_03255 PF13847 Methyltransferase domain BEN74_03255 PF17827 PrmC N-terminal domain BEN74_03260 PF00472 RF-1 domain BEN74_03260 PF03462 PCRF domain BEN74_03280 PF00296 Luciferase-like monooxygenase BEN74_03285 PF05360 yiaA/B two helix domain BEN74_03295 PF03618 Kinase/pyrophosphorylase BEN74_03300 PF02896 PEP-utilising enzyme, TIM barrel domain BEN74_03300 PF00391 PEP-utilising enzyme, mobile domain BEN74_03300 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BEN74_03310 PF06481 COX Aromatic Rich Motif BEN74_03310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEN74_03315 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN74_03320 PF00510 Cytochrome c oxidase subunit III BEN74_03325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BEN74_03330 PF01040 UbiA prenyltransferase family BEN74_03345 PF01250 Ribosomal protein S6 BEN74_03350 PF01084 Ribosomal protein S18 BEN74_03355 PF01281 Ribosomal protein L9, N-terminal domain BEN74_03355 PF03948 Ribosomal protein L9, C-terminal domain BEN74_03360 PF00772 DnaB-like helicase N terminal domain BEN74_03360 PF03796 DnaB-like helicase C terminal domain BEN74_03375 PF00842 Alanine racemase, C-terminal domain BEN74_03375 PF01168 Alanine racemase, N-terminal domain BEN74_03385 PF01841 Transglutaminase-like superfamily BEN74_03385 PF08379 Bacterial transglutaminase-like N-terminal region BEN74_03395 PF14403 Circularly permuted ATP-grasp type 2 BEN74_03405 PF01645 Conserved region in glutamate synthase BEN74_03420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BEN74_03420 PF01565 FAD binding domain BEN74_03425 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN74_03430 PF00465 Iron-containing alcohol dehydrogenase BEN74_03435 PF12169 DNA polymerase III subunits gamma and tau domain III BEN74_03435 PF12170 DNA polymerase III tau subunit V interacting with alpha BEN74_03435 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BEN74_03465 PF00108 Thiolase, N-terminal domain BEN74_03465 PF02803 Thiolase, C-terminal domain BEN74_03475 PF03466 LysR substrate binding domain BEN74_03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_03480 PF00923 Transaldolase/Fructose-6-phosphate aldolase BEN74_03485 PF01810 LysE type translocator BEN74_03490 PF03594 Benzoate membrane transport protein BEN74_03495 PF00440 Bacterial regulatory proteins, tetR family BEN74_03495 PF17932 Tetracyclin repressor-like, C-terminal domain BEN74_03500 PF00893 Small Multidrug Resistance protein BEN74_03505 PF00135 Carboxylesterase family BEN74_03510 PF00582 Universal stress protein family BEN74_03515 PF00582 Universal stress protein family BEN74_03535 PF11940 Domain of unknown function (DUF3458) Ig-like fold BEN74_03535 PF01433 Peptidase family M1 domain BEN74_03535 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BEN74_03555 PF02110 Hydroxyethylthiazole kinase family BEN74_03560 PF03471 Transporter associated domain BEN74_03560 PF03741 Integral membrane protein TerC family BEN74_03580 PF00171 Aldehyde dehydrogenase family BEN74_03585 PF01274 Malate synthase BEN74_03590 PF03969 AFG1-like ATPase BEN74_03595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN74_03595 PF12833 Helix-turn-helix domain BEN74_03600 PF00743 Flavin-binding monooxygenase-like BEN74_03605 PF03956 Lysine exporter LysO BEN74_03610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BEN74_03635 PF00216 Bacterial DNA-binding protein BEN74_03640 PF00575 S1 RNA binding domain BEN74_03645 PF02224 Cytidylate kinase BEN74_03655 PF14437 MafB19-like deaminase BEN74_03665 PF03167 Uracil DNA glycosylase superfamily BEN74_03675 PF03934 Type II secretion system (T2SS), protein K BEN74_03680 PF07963 Prokaryotic N-terminal methylation motif BEN74_03680 PF11612 Type II secretion system (T2SS), protein J BEN74_03685 PF02501 Type II secretion system (T2SS), protein I BEN74_03685 PF07963 Prokaryotic N-terminal methylation motif BEN74_03690 PF07963 Prokaryotic N-terminal methylation motif BEN74_03700 PF01026 TatD related DNase BEN74_03710 PF09115 DNA polymerase III, delta subunit, C terminal BEN74_03715 PF02348 Cytidylyltransferase BEN74_03720 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BEN74_03725 PF00005 ABC transporter BEN74_03725 PF00664 ABC transporter transmembrane region BEN74_03735 PF01618 MotA/TolQ/ExbB proton channel family BEN74_03740 PF17762 HTH domain found in ParB protein BEN74_03740 PF02195 ParB-like nuclease domain BEN74_03745 PF13614 AAA domain BEN74_03750 PF02527 rRNA small subunit methyltransferase G BEN74_03755 PF00483 Nucleotidyl transferase BEN74_03760 PF01636 Phosphotransferase enzyme family BEN74_03765 PF03968 OstA-like protein BEN74_03765 PF04453 LPS transport system D BEN74_03770 PF00639 PPIC-type PPIASE domain BEN74_03770 PF09312 SurA N-terminal domain BEN74_03775 PF17209 Hfq protein BEN74_03785 PF08676 MutL C terminal dimerisation domain BEN74_03785 PF01119 DNA mismatch repair protein, C-terminal domain BEN74_03790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BEN74_03795 PF00849 RNA pseudouridylate synthase BEN74_03795 PF01479 S4 domain BEN74_03810 PF01479 S4 domain BEN74_03810 PF00849 RNA pseudouridylate synthase BEN74_03815 PF04284 Protein of unknown function (DUF441) BEN74_03820 PF18019 HD domain BEN74_03835 PF09615 CRISPR-associated protein (Cas_Csy3) BEN74_03845 PF01867 CRISPR associated protein Cas1 BEN74_03850 PF00872 Transposase, Mutator family BEN74_04090 PF00772 DnaB-like helicase N terminal domain BEN74_04090 PF03796 DnaB-like helicase C terminal domain BEN74_04175 PF00589 Phage integrase family BEN74_04185 PF11992 Domain of unknown function (DUF3488) BEN74_04185 PF13559 Domain of unknown function (DUF4129) BEN74_04185 PF01841 Transglutaminase-like superfamily BEN74_04195 PF07726 ATPase family associated with various cellular activities (AAA) BEN74_04195 PF17863 AAA lid domain BEN74_04200 PF04328 Selenoprotein, putative BEN74_04205 PF02554 Carbon starvation protein CstA BEN74_04205 PF13722 5TM C-terminal transporter carbon starvation CstA BEN74_04210 PF01132 Elongation factor P (EF-P) OB domain BEN74_04210 PF08207 Elongation factor P (EF-P) KOW-like domain BEN74_04210 PF09285 Elongation factor P, C-terminal BEN74_04215 PF04055 Radical SAM superfamily BEN74_04230 PF01197 Ribosomal protein L31 BEN74_04235 PF13593 SBF-like CPA transporter family (DUF4137) BEN74_04240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN74_04250 PF07690 Major Facilitator Superfamily BEN74_04255 PF13654 AAA domain BEN74_04255 PF05362 Lon protease (S16) C-terminal proteolytic domain BEN74_04260 PF00462 Glutaredoxin BEN74_04265 PF00202 Aminotransferase class-III BEN74_04270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BEN74_04270 PF02769 AIR synthase related protein, C-terminal domain BEN74_04270 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BEN74_04280 PF05762 VWA domain containing CoxE-like protein BEN74_04290 PF07728 AAA domain (dynein-related subfamily) BEN74_04295 PF13569 Domain of unknown function (DUF4132) BEN74_04300 PF01966 HD domain BEN74_04310 PF07499 RuvA, C-terminal domain BEN74_04310 PF01330 RuvA N terminal domain BEN74_04315 PF05491 RuvB C-terminal winged helix domain BEN74_04315 PF17864 RuvB AAA lid domain BEN74_04315 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEN74_04325 PF03061 Thioesterase superfamily BEN74_04330 PF01618 MotA/TolQ/ExbB proton channel family BEN74_04335 PF02472 Biopolymer transport protein ExbD/TolR BEN74_04350 PF04052 TolB amino-terminal domain BEN74_04350 PF07676 WD40-like Beta Propeller Repeat BEN74_04355 PF00691 OmpA family BEN74_04365 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BEN74_04370 PF00588 SpoU rRNA Methylase family BEN74_04370 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN74_04400 PF00308 Bacterial dnaA protein BEN74_04400 PF08299 Bacterial dnaA protein helix-turn-helix BEN74_04400 PF11638 DnaA N-terminal domain BEN74_04405 PF01594 AI-2E family transporter BEN74_04410 PF02769 AIR synthase related protein, C-terminal domain BEN74_04410 PF00586 AIR synthase related protein, N-terminal domain BEN74_04415 PF00551 Formyl transferase BEN74_04420 PF12697 Alpha/beta hydrolase family BEN74_04425 PF01343 Peptidase family S49 BEN74_04425 PF06965 Na+/H+ antiporter 1 BEN74_04435 PF03772 Competence protein BEN74_04435 PF00753 Metallo-beta-lactamase superfamily BEN74_04435 PF13567 Domain of unknown function (DUF4131) BEN74_04440 PF00005 ABC transporter BEN74_04445 PF02687 FtsX-like permease family BEN74_04445 PF12704 MacB-like periplasmic core domain BEN74_04455 PF00892 EamA-like transporter family BEN74_04460 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BEN74_04470 PF00266 Aminotransferase class-V BEN74_04485 PF13533 Biotin-lipoyl like BEN74_04500 PF00375 Sodium:dicarboxylate symporter family BEN74_04510 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN74_04510 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN74_04520 PF05163 DinB family BEN74_04525 PF00766 Electron transfer flavoprotein FAD-binding domain BEN74_04525 PF01012 Electron transfer flavoprotein domain BEN74_04530 PF01012 Electron transfer flavoprotein domain BEN74_04540 PF01810 LysE type translocator BEN74_04545 PF01037 Lrp/AsnC ligand binding domain BEN74_04550 PF13302 Acetyltransferase (GNAT) domain BEN74_04575 PF00180 Isocitrate/isopropylmalate dehydrogenase BEN74_04580 PF00589 Phage integrase family BEN74_04580 PF14659 Phage integrase, N-terminal SAM-like domain BEN74_04580 PF13356 Arm DNA-binding domain BEN74_04760 PF00145 C-5 cytosine-specific DNA methylase BEN74_04860 PF00849 RNA pseudouridylate synthase BEN74_04865 PF00375 Sodium:dicarboxylate symporter family BEN74_04875 PF02885 Glycosyl transferase family, helical bundle domain BEN74_04875 PF00591 Glycosyl transferase family, a/b domain BEN74_04885 PF07023 Protein of unknown function (DUF1315) BEN74_04890 PF01513 ATP-NAD kinase BEN74_04895 PF00905 Penicillin binding protein transpeptidase domain BEN74_04895 PF14814 Bifunctional transglycosylase second domain BEN74_04895 PF00912 Transglycosylase BEN74_04905 PF00293 NUDIX domain BEN74_04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_04915 PF08521 Two-component sensor kinase N-terminal BEN74_04915 PF00512 His Kinase A (phospho-acceptor) domain BEN74_04920 PF00486 Transcriptional regulatory protein, C terminal BEN74_04920 PF00072 Response regulator receiver domain BEN74_04935 PF00437 Type II/IV secretion system protein BEN74_04935 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BEN74_04950 PF01980 tRNA-methyltransferase O BEN74_04950 PF18389 TrmO C-terminal domain BEN74_04955 PF00175 Oxidoreductase NAD-binding domain BEN74_04955 PF00970 Oxidoreductase FAD-binding domain BEN74_04985 PF13411 MerR HTH family regulatory protein BEN74_04990 PF03358 NADPH-dependent FMN reductase BEN74_04995 PF01758 Sodium Bile acid symporter family BEN74_05000 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN74_05005 PF01022 Bacterial regulatory protein, arsR family BEN74_05015 PF00037 4Fe-4S binding domain BEN74_05020 PF02627 Carboxymuconolactone decarboxylase family BEN74_05025 PF12833 Helix-turn-helix domain BEN74_05025 PF12852 Cupin BEN74_05030 PF13192 Thioredoxin domain BEN74_05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_05040 PF05816 Toxic anion resistance protein (TelA) BEN74_05050 PF14760 Rnk N-terminus BEN74_05050 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN74_05055 PF00464 Serine hydroxymethyltransferase BEN74_05095 PF12167 Arm DNA-binding domain BEN74_05095 PF00589 Phage integrase family BEN74_05100 PF00929 Exonuclease BEN74_05350 PF00005 ABC transporter BEN74_05355 PF01061 ABC-2 type transporter BEN74_05360 PF14489 QueF-like protein BEN74_05360 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BEN74_05375 PF13406 Transglycosylase SLT domain BEN74_05380 PF03330 Lytic transglycolase BEN74_05380 PF05036 Sporulation related domain BEN74_05415 PF00889 Elongation factor TS BEN74_05420 PF00318 Ribosomal protein S2 BEN74_05425 PF00557 Metallopeptidase family M24 BEN74_05435 PF01810 LysE type translocator BEN74_05440 PF00892 EamA-like transporter family BEN74_05480 PF01040 UbiA prenyltransferase family BEN74_05485 PF04345 Chorismate lyase BEN74_05510 PF00117 Glutamine amidotransferase class-I BEN74_05515 PF02885 Glycosyl transferase family, helical bundle domain BEN74_05515 PF00591 Glycosyl transferase family, a/b domain BEN74_05520 PF00218 Indole-3-glycerol phosphate synthase BEN74_05535 PF01227 GTP cyclohydrolase I BEN74_05545 PF00990 Diguanylate cyclase, GGDEF domain BEN74_05550 PF05675 Protein of unknown function (DUF817) BEN74_05555 PF01208 Uroporphyrinogen decarboxylase (URO-D) BEN74_05570 PF17954 Quercetinase C-terminal cupin domain BEN74_05570 PF02678 Pirin BEN74_05575 PF00842 Alanine racemase, C-terminal domain BEN74_05575 PF01168 Alanine racemase, N-terminal domain BEN74_05580 PF00324 Amino acid permease BEN74_05585 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BEN74_05590 PF04996 Succinylarginine dihydrolase BEN74_05595 PF00171 Aldehyde dehydrogenase family BEN74_05600 PF04958 Arginine N-succinyltransferase beta subunit BEN74_05605 PF00202 Aminotransferase class-III BEN74_05610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN74_05610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN74_05630 PF00107 Zinc-binding dehydrogenase BEN74_05630 PF14765 Polyketide synthase dehydratase BEN74_05630 PF08240 Alcohol dehydrogenase GroES-like domain BEN74_05630 PF08659 KR domain BEN74_05630 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN74_05630 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN74_05630 PF16197 Ketoacyl-synthetase C-terminal extension BEN74_05630 PF00698 Acyl transferase domain BEN74_05630 PF00550 Phosphopantetheine attachment site BEN74_05635 PF16925 Tetracyclin repressor-like, C-terminal domain BEN74_05635 PF00440 Bacterial regulatory proteins, tetR family BEN74_05640 PF06039 Malate:quinone oxidoreductase (Mqo) BEN74_05680 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family BEN74_05695 PF02798 Glutathione S-transferase, N-terminal domain BEN74_05695 PF14497 Glutathione S-transferase, C-terminal domain BEN74_05705 PF01144 Coenzyme A transferase BEN74_05710 PF01144 Coenzyme A transferase BEN74_05715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN74_05720 PF00324 Amino acid permease BEN74_05725 PF00155 Aminotransferase class I and II BEN74_05755 PF00589 Phage integrase family BEN74_05755 PF13356 Arm DNA-binding domain BEN74_05765 PF00925 GTP cyclohydrolase II BEN74_05770 PF00290 Tryptophan synthase alpha chain BEN74_05775 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_05780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_05780 PF03466 LysR substrate binding domain BEN74_05790 PF00872 Transposase, Mutator family BEN74_05800 PF00486 Transcriptional regulatory protein, C terminal BEN74_05800 PF00072 Response regulator receiver domain BEN74_05805 PF00512 His Kinase A (phospho-acceptor) domain BEN74_05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_05805 PF08521 Two-component sensor kinase N-terminal BEN74_05840 PF08212 Lipocalin-like domain BEN74_05845 PF00313 'Cold-shock' DNA-binding domain BEN74_05860 PF00293 NUDIX domain BEN74_05860 PF09297 NADH pyrophosphatase zinc ribbon domain BEN74_05865 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BEN74_05880 PF00576 HIUase/Transthyretin family BEN74_05890 PF00072 Response regulator receiver domain BEN74_05890 PF00486 Transcriptional regulatory protein, C terminal BEN74_05895 PF00672 HAMP domain BEN74_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_05895 PF00512 His Kinase A (phospho-acceptor) domain BEN74_05900 PF00005 ABC transporter BEN74_05905 PF02687 FtsX-like permease family BEN74_05905 PF12704 MacB-like periplasmic core domain BEN74_05910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN74_05935 PF06224 Winged helix DNA-binding domain BEN74_05940 PF00717 Peptidase S24-like BEN74_05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_05950 PF08521 Two-component sensor kinase N-terminal BEN74_05950 PF00512 His Kinase A (phospho-acceptor) domain BEN74_05955 PF00072 Response regulator receiver domain BEN74_05955 PF00486 Transcriptional regulatory protein, C terminal BEN74_05970 PF00873 AcrB/AcrD/AcrF family BEN74_05980 PF01292 Prokaryotic cytochrome b561 BEN74_05995 PF00501 AMP-binding enzyme BEN74_06040 PF05930 Prophage CP4-57 regulatory protein (AlpA) BEN74_06050 PF05656 Protein of unknown function (DUF805) BEN74_06080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN74_06080 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_06085 PF01565 FAD binding domain BEN74_06085 PF09330 D-lactate dehydrogenase, membrane binding BEN74_06090 PF01070 FMN-dependent dehydrogenase BEN74_06095 PF00392 Bacterial regulatory proteins, gntR family BEN74_06095 PF07729 FCD domain BEN74_06100 PF02652 L-lactate permease BEN74_06110 PF00764 Arginosuccinate synthase BEN74_06120 PF00990 Diguanylate cyclase, GGDEF domain BEN74_06120 PF17158 Membrane-associated sensor, integral membrane domain BEN74_06125 PF01979 Amidohydrolase family BEN74_06130 PF00929 Exonuclease BEN74_06140 PF00324 Amino acid permease BEN74_06150 PF00324 Amino acid permease BEN74_06175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN74_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_06180 PF00005 ABC transporter BEN74_06180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEN74_06185 PF12911 N-terminal TM domain of oligopeptide transport permease C BEN74_06185 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_06190 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_06195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEN74_06200 PF01476 LysM domain BEN74_06200 PF01464 Transglycosylase SLT domain BEN74_06205 PF00929 Exonuclease BEN74_06215 PF00293 NUDIX domain BEN74_06215 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BEN74_06215 PF09297 NADH pyrophosphatase zinc ribbon domain BEN74_06225 PF04972 BON domain BEN74_06230 PF02021 Uncharacterised protein family UPF0102 BEN74_06235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEN74_06250 PF01494 FAD binding domain BEN74_06255 PF01494 FAD binding domain BEN74_06275 PF00107 Zinc-binding dehydrogenase BEN74_06275 PF08240 Alcohol dehydrogenase GroES-like domain BEN74_06280 PF00557 Metallopeptidase family M24 BEN74_06280 PF05195 Aminopeptidase P, N-terminal domain BEN74_06285 PF03695 Uncharacterised protein family (UPF0149) BEN74_06310 PF05658 Head domain of trimeric autotransporter adhesin BEN74_06310 PF03895 YadA-like membrane anchor domain BEN74_06310 PF13018 Extended Signal Peptide of Type V secretion system BEN74_06310 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN74_06310 PF05658 Head domain of trimeric autotransporter adhesin BEN74_06310 PF05658 Head domain of trimeric autotransporter adhesin BEN74_06310 PF13018 Extended Signal Peptide of Type V secretion system BEN74_06310 PF03895 YadA-like membrane anchor domain BEN74_06310 PF03895 YadA-like membrane anchor domain BEN74_06310 PF13018 Extended Signal Peptide of Type V secretion system BEN74_06310 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN74_06310 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN74_06325 PF04172 LrgB-like family BEN74_06330 PF03788 LrgA family BEN74_06335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN74_06335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN74_06345 PF01654 Cytochrome bd terminal oxidase subunit I BEN74_06350 PF02322 Cytochrome bd terminal oxidase subunit II BEN74_06360 PF00155 Aminotransferase class I and II BEN74_06360 PF00392 Bacterial regulatory proteins, gntR family BEN74_06375 PF02321 Outer membrane efflux protein BEN74_06380 PF00873 AcrB/AcrD/AcrF family BEN74_06385 PF00873 AcrB/AcrD/AcrF family BEN74_06390 PF13533 Biotin-lipoyl like BEN74_06415 PF16220 Domain of unknown function (DUF4880) BEN74_06415 PF04773 FecR protein BEN74_06420 PF07715 TonB-dependent Receptor Plug Domain BEN74_06420 PF00593 TonB dependent receptor BEN74_06420 PF07660 Secretin and TonB N terminus short domain BEN74_06425 PF01812 5-formyltetrahydrofolate cyclo-ligase family BEN74_06430 PF00004 ATPase family associated with various cellular activities (AAA) BEN74_06430 PF05362 Lon protease (S16) C-terminal proteolytic domain BEN74_06430 PF02190 ATP-dependent protease La (LON) substrate-binding domain BEN74_06440 PF04389 Peptidase family M28 BEN74_06445 PF02590 Predicted SPOUT methyltransferase BEN74_06450 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN74_06460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN74_06460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN74_06465 PF04060 Putative Fe-S cluster BEN74_06470 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN74_06470 PF00633 Helix-hairpin-helix motif BEN74_06470 PF10576 Iron-sulfur binding domain of endonuclease III BEN74_06480 PF05191 Adenylate kinase, active site lid BEN74_06515 PF01553 Acyltransferase BEN74_06520 PF17185 NlpE C-terminal OB domain BEN74_06520 PF04170 NlpE N-terminal domain BEN74_06535 PF02342 TerD domain BEN74_06540 PF01987 Mitochondrial biogenesis AIM24 BEN74_06545 PF10138 vWA found in TerF C terminus BEN74_06550 PF02342 TerD domain BEN74_06560 PF02342 TerD domain BEN74_06565 PF02342 TerD domain BEN74_06590 PF11202 Phosphoribosyl transferase (PRTase) BEN74_06590 PF15608 PELOTA RNA binding domain BEN74_06615 PF00092 von Willebrand factor type A domain BEN74_06620 PF02342 TerD domain BEN74_06630 PF00118 TCP-1/cpn60 chaperonin family BEN74_06635 PF00166 Chaperonin 10 Kd subunit BEN74_06645 PF00781 Diacylglycerol kinase catalytic domain BEN74_06650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BEN74_06650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BEN74_06665 PF01266 FAD dependent oxidoreductase BEN74_06665 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BEN74_06680 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEN74_06680 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEN74_06710 PF00107 Zinc-binding dehydrogenase BEN74_06710 PF08240 Alcohol dehydrogenase GroES-like domain BEN74_06720 PF00085 Thioredoxin BEN74_06725 PF00043 Glutathione S-transferase, C-terminal domain BEN74_06725 PF02798 Glutathione S-transferase, N-terminal domain BEN74_06745 PF00009 Elongation factor Tu GTP binding domain BEN74_06750 PF01507 Phosphoadenosine phosphosulfate reductase family BEN74_06760 PF01145 SPFH domain / Band 7 family BEN74_06760 PF15975 Flotillin BEN74_06765 PF14883 Hypothetical glycosyl hydrolase family 13 BEN74_06765 PF01522 Polysaccharide deacetylase BEN74_06775 PF00535 Glycosyl transferase family 2 BEN74_06780 PF01522 Polysaccharide deacetylase BEN74_06780 PF14883 Hypothetical glycosyl hydrolase family 13 BEN74_06790 PF02629 CoA binding domain BEN74_06790 PF00549 CoA-ligase BEN74_06795 PF00549 CoA-ligase BEN74_06795 PF08442 ATP-grasp domain BEN74_06800 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_06800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN74_06805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN74_06805 PF02817 e3 binding domain BEN74_06805 PF00364 Biotin-requiring enzyme BEN74_06810 PF00676 Dehydrogenase E1 component BEN74_06810 PF16078 2-oxoglutarate dehydrogenase N-terminus BEN74_06810 PF16870 2-oxoglutarate dehydrogenase C-terminal BEN74_06810 PF02779 Transketolase, pyrimidine binding domain BEN74_06820 PF13085 2Fe-2S iron-sulfur cluster binding domain BEN74_06825 PF00890 FAD binding domain BEN74_06825 PF02910 Fumarate reductase flavoprotein C-term BEN74_06830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN74_06835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN74_06840 PF00285 Citrate synthase, C-terminal domain BEN74_06855 PF00795 Carbon-nitrogen hydrolase BEN74_06855 PF02540 NAD synthase BEN74_06875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN74_06880 PF00999 Sodium/hydrogen exchanger family BEN74_06890 PF04228 Putative neutral zinc metallopeptidase BEN74_06895 PF05661 Protein of unknown function (DUF808) BEN74_06900 PF00579 tRNA synthetases class I (W and Y) BEN74_06910 PF00152 tRNA synthetases class II (D, K and N) BEN74_06910 PF01336 OB-fold nucleic acid binding domain BEN74_06920 PF00156 Phosphoribosyl transferase domain BEN74_06925 PF00301 Rubredoxin BEN74_06930 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_06930 PF18113 Rubredoxin binding C-terminal domain BEN74_06935 PF00561 alpha/beta hydrolase fold BEN74_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_06940 PF03466 LysR substrate binding domain BEN74_06950 PF17941 Polyphosphate kinase C-terminal domain 1 BEN74_06950 PF13089 Polyphosphate kinase N-terminal domain BEN74_06950 PF13090 Polyphosphate kinase C-terminal domain 2 BEN74_06950 PF02503 Polyphosphate kinase middle domain BEN74_06955 PF00912 Transglycosylase BEN74_06960 PF01694 Rhomboid family BEN74_06970 PF00005 ABC transporter BEN74_06975 PF13472 GDSL-like Lipase/Acylhydrolase family BEN74_06980 PF00484 Carbonic anhydrase BEN74_06990 PF00561 alpha/beta hydrolase fold BEN74_07000 PF00593 TonB dependent receptor BEN74_07000 PF07715 TonB-dependent Receptor Plug Domain BEN74_07005 PF01521 Iron-sulphur cluster biosynthesis BEN74_07005 PF01106 NifU-like domain BEN74_07025 PF01384 Phosphate transporter family BEN74_07030 PF00809 Pterin binding enzyme BEN74_07030 PF02965 Vitamin B12 dependent methionine synthase, activation domain BEN74_07030 PF02310 B12 binding domain BEN74_07030 PF02607 B12 binding domain BEN74_07030 PF02574 Homocysteine S-methyltransferase BEN74_07040 PF04480 Protein of unknown function (DUF559) BEN74_07065 PF00378 Enoyl-CoA hydratase/isomerase BEN74_07085 PF00990 Diguanylate cyclase, GGDEF domain BEN74_07090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN74_07095 PF02308 MgtC family BEN74_07100 PF07152 YaeQ protein BEN74_07105 PF07683 Cobalamin synthesis protein cobW C-terminal domain BEN74_07105 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEN74_07120 PF03061 Thioesterase superfamily BEN74_07130 PF01734 Patatin-like phospholipase BEN74_07135 PF01235 Sodium:alanine symporter family BEN74_07140 PF03616 Sodium/glutamate symporter BEN74_07155 PF07690 Major Facilitator Superfamily BEN74_07160 PF12805 FUSC-like inner membrane protein yccS BEN74_07170 PF00667 FAD binding domain BEN74_07170 PF00258 Flavodoxin BEN74_07170 PF00175 Oxidoreductase NAD-binding domain BEN74_07235 PF04304 Protein of unknown function (DUF454) BEN74_07245 PF08085 Entericidin EcnA/B family BEN74_07250 PF07687 Peptidase dimerisation domain BEN74_07250 PF01546 Peptidase family M20/M25/M40 BEN74_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_07260 PF02895 Signal transducing histidine kinase, homodimeric domain BEN74_07260 PF01584 CheW-like domain BEN74_07260 PF01627 Hpt domain BEN74_07260 PF07194 P2 response regulator binding domain BEN74_07265 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BEN74_07265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN74_07270 PF01584 CheW-like domain BEN74_07275 PF00072 Response regulator receiver domain BEN74_07280 PF00072 Response regulator receiver domain BEN74_07295 PF04073 Aminoacyl-tRNA editing domain BEN74_07295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN74_07295 PF03129 Anticodon binding domain BEN74_07320 PF00692 dUTPase BEN74_07335 PF10609 NUBPL iron-transfer P-loop NTPase BEN74_07355 PF09334 tRNA synthetases class I (M) BEN74_07355 PF01588 Putative tRNA binding domain BEN74_07365 PF00753 Metallo-beta-lactamase superfamily BEN74_07365 PF16123 Hydroxyacylglutathione hydrolase C-terminus BEN74_07375 PF06100 MCRA family BEN74_07400 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_07415 PF05552 Conserved TM helix BEN74_07430 PF00970 Oxidoreductase FAD-binding domain BEN74_07430 PF00175 Oxidoreductase NAD-binding domain BEN74_07435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_07435 PF03466 LysR substrate binding domain BEN74_07460 PF00361 Proton-conducting membrane transporter BEN74_07465 PF00361 Proton-conducting membrane transporter BEN74_07470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN74_07470 PF00361 Proton-conducting membrane transporter BEN74_07475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN74_07480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BEN74_07485 PF12838 4Fe-4S dicluster domain BEN74_07490 PF00146 NADH dehydrogenase BEN74_07495 PF00384 Molybdopterin oxidoreductase BEN74_07495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEN74_07495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEN74_07500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BEN74_07500 PF10531 SLBB domain BEN74_07500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BEN74_07510 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BEN74_07510 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BEN74_07515 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BEN74_07520 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BEN74_07530 PF00512 His Kinase A (phospho-acceptor) domain BEN74_07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_07530 PF00672 HAMP domain BEN74_07535 PF00072 Response regulator receiver domain BEN74_07535 PF00486 Transcriptional regulatory protein, C terminal BEN74_07540 PF00317 Ribonucleotide reductase, all-alpha domain BEN74_07540 PF02867 Ribonucleotide reductase, barrel domain BEN74_07540 PF03477 ATP cone domain BEN74_07550 PF00268 Ribonucleotide reductase, small chain BEN74_07565 PF06508 Queuosine biosynthesis protein QueC BEN74_07570 PF03412 Peptidase C39 family BEN74_07570 PF00005 ABC transporter BEN74_07570 PF00664 ABC transporter transmembrane region BEN74_07575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN74_07580 PF00005 ABC transporter BEN74_07580 PF02687 FtsX-like permease family BEN74_07580 PF12704 MacB-like periplasmic core domain BEN74_07635 PF05656 Protein of unknown function (DUF805) BEN74_07645 PF00108 Thiolase, N-terminal domain BEN74_07645 PF02803 Thiolase, C-terminal domain BEN74_07650 PF00378 Enoyl-CoA hydratase/isomerase BEN74_07650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN74_07650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN74_07675 PF03006 Haemolysin-III related BEN74_07690 PF10518 TAT (twin-arginine translocation) pathway signal sequence BEN74_07690 PF00149 Calcineurin-like phosphoesterase BEN74_07695 PF13091 PLD-like domain BEN74_07705 PF16360 GTP-binding GTPase Middle Region BEN74_07705 PF01926 50S ribosome-binding GTPase BEN74_07705 PF13167 GTP-binding GTPase N-terminal BEN74_07735 PF00149 Calcineurin-like phosphoesterase BEN74_07740 PF00398 Ribosomal RNA adenine dimethylase BEN74_07745 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BEN74_07750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEN74_07750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN74_07755 PF00893 Small Multidrug Resistance protein BEN74_07760 PF05275 Copper resistance protein B precursor (CopB) BEN74_07770 PF00394 Multicopper oxidase BEN74_07770 PF07731 Multicopper oxidase BEN74_07770 PF07732 Multicopper oxidase BEN74_07785 PF00834 Ribulose-phosphate 3 epimerase family BEN74_07800 PF05987 Bacterial protein of unknown function (DUF898) BEN74_07805 PF00756 Putative esterase BEN74_07815 PF04445 Putative SAM-dependent methyltransferase BEN74_07820 PF02673 Bacitracin resistance protein BacA BEN74_07825 PF00814 Glycoprotease family BEN74_07835 PF00293 NUDIX domain BEN74_07875 PF00425 chorismate binding enzyme BEN74_07875 PF04715 Anthranilate synthase component I, N terminal region BEN74_07880 PF00155 Aminotransferase class I and II BEN74_07885 PF00815 Histidinol dehydrogenase BEN74_07895 PF01634 ATP phosphoribosyltransferase BEN74_07900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN74_07905 PF01722 BolA-like protein BEN74_07910 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BEN74_07915 PF00309 Sigma-54 factor, Activator interacting domain (AID) BEN74_07915 PF04963 Sigma-54 factor, core binding domain BEN74_07915 PF04552 Sigma-54, DNA binding domain BEN74_07945 PF04333 MlaA lipoprotein BEN74_07960 PF00795 Carbon-nitrogen hydrolase BEN74_07965 PF02566 OsmC-like protein BEN74_07970 PF00437 Type II/IV secretion system protein BEN74_07990 PF01612 3'-5' exonuclease BEN74_07990 PF00476 DNA polymerase family A BEN74_07990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEN74_07990 PF01367 5'-3' exonuclease, C-terminal SAM fold BEN74_08015 PF00486 Transcriptional regulatory protein, C terminal BEN74_08015 PF00072 Response regulator receiver domain BEN74_08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_08020 PF00672 HAMP domain BEN74_08020 PF00512 His Kinase A (phospho-acceptor) domain BEN74_08030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_08030 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN74_08030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_08030 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_08035 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_08035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_08035 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN74_08035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_08045 PF06146 Phosphate-starvation-inducible E BEN74_08060 PF02325 YGGT family BEN74_08065 PF03807 NADP oxidoreductase coenzyme F420-dependent BEN74_08065 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEN74_08070 PF11734 TilS substrate C-terminal domain BEN74_08070 PF09179 TilS substrate binding domain BEN74_08070 PF01171 PP-loop family BEN74_08075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BEN74_08080 PF02541 Ppx/GppA phosphatase family BEN74_08085 PF00085 Thioredoxin BEN74_08090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN74_08090 PF07497 Rho termination factor, RNA-binding domain BEN74_08090 PF07498 Rho termination factor, N-terminal domain BEN74_08100 PF00216 Bacterial DNA-binding protein BEN74_08105 PF01588 Putative tRNA binding domain BEN74_08105 PF03484 tRNA synthetase B5 domain BEN74_08105 PF03483 B3/4 domain BEN74_08105 PF03147 Ferredoxin-fold anticodon binding domain BEN74_08105 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BEN74_08110 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BEN74_08110 PF01409 tRNA synthetases class II core domain (F) BEN74_08135 PF08719 Domain of unknown function (DUF1768) BEN74_08140 PF00453 Ribosomal protein L20 BEN74_08145 PF01632 Ribosomal protein L35 BEN74_08160 PF09335 SNARE associated Golgi protein BEN74_08170 PF02798 Glutathione S-transferase, N-terminal domain BEN74_08170 PF00043 Glutathione S-transferase, C-terminal domain BEN74_08175 PF00011 Hsp20/alpha crystallin family BEN74_08180 PF05198 Translation initiation factor IF-3, N-terminal domain BEN74_08180 PF00707 Translation initiation factor IF-3, C-terminal domain BEN74_08185 PF03129 Anticodon binding domain BEN74_08185 PF02824 TGS domain BEN74_08185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN74_08185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN74_08195 PF00501 AMP-binding enzyme BEN74_08195 PF13193 AMP-binding enzyme C-terminal domain BEN74_08200 PF04751 Protein of unknown function (DUF615) BEN74_08205 PF00381 PTS HPr component phosphorylation site BEN74_08210 PF03668 P-loop ATPase protein family BEN74_08215 PF02569 Pantoate-beta-alanine ligase BEN74_08220 PF02548 Ketopantoate hydroxymethyltransferase BEN74_08225 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BEN74_08230 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN74_08230 PF12626 Polymerase A arginine-rich C-terminus BEN74_08230 PF01743 Poly A polymerase head domain BEN74_08240 PF03819 MazG nucleotide pyrophosphohydrolase domain BEN74_08255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEN74_08255 PF01926 50S ribosome-binding GTPase BEN74_08260 PF13360 PQQ-like domain BEN74_08260 PF01011 PQQ enzyme repeat BEN74_08270 PF03129 Anticodon binding domain BEN74_08270 PF13393 Histidyl-tRNA synthetase BEN74_08275 PF04551 GcpE protein BEN74_08280 PF13464 Domain of unknown function (DUF4115) BEN74_08290 PF04055 Radical SAM superfamily BEN74_08295 PF00334 Nucleoside diphosphate kinase BEN74_08300 PF04384 Iron-sulphur cluster assembly BEN74_08305 PF01569 PAP2 superfamily BEN74_08310 PF13439 Glycosyltransferase Family 4 BEN74_08310 PF00534 Glycosyl transferases group 1 BEN74_08345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BEN74_08345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BEN74_08350 PF10369 Small subunit of acetolactate synthase BEN74_08355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN74_08355 PF00205 Thiamine pyrophosphate enzyme, central domain BEN74_08355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN74_08370 PF00133 tRNA synthetases class I (I, L, M and V) BEN74_08370 PF13603 Leucyl-tRNA synthetase, Domain 2 BEN74_08370 PF08264 Anticodon-binding domain of tRNA BEN74_08370 PF09334 tRNA synthetases class I (M) BEN74_08385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN74_08390 PF02687 FtsX-like permease family BEN74_08390 PF12704 MacB-like periplasmic core domain BEN74_08390 PF00005 ABC transporter BEN74_08405 PF00899 ThiF family BEN74_08410 PF00929 Exonuclease BEN74_08415 PF03193 RsgA GTPase BEN74_08425 PF00462 Glutaredoxin BEN74_08430 PF02556 Preprotein translocase subunit SecB BEN74_08435 PF01207 Dihydrouridine synthase (Dus) BEN74_08445 PF02441 Flavoprotein BEN74_08445 PF04127 DNA / pantothenate metabolism flavoprotein BEN74_08450 PF04002 RadC-like JAB domain BEN74_08455 PF01062 Bestrophin, RFP-TM, chloride channel BEN74_08465 PF04279 Intracellular septation protein A BEN74_08470 PF03795 YCII-related domain BEN74_08480 PF01266 FAD dependent oxidoreductase BEN74_08480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BEN74_08490 PF04461 Protein of unknown function (DUF520) BEN74_08505 PF03061 Thioesterase superfamily BEN74_08510 PF00085 Thioredoxin BEN74_08515 PF12146 Serine aminopeptidase, S33 BEN74_08520 PF00753 Metallo-beta-lactamase superfamily BEN74_08520 PF04273 Putative phosphatase (DUF442) BEN74_08535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN74_08535 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_08535 PF00403 Heavy-metal-associated domain BEN74_08570 PF01066 CDP-alcohol phosphatidyltransferase BEN74_08575 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BEN74_08595 PF02416 mttA/Hcf106 family BEN74_08600 PF02416 mttA/Hcf106 family BEN74_08605 PF00902 Sec-independent protein translocase protein (TatC) BEN74_08620 PF01790 Prolipoprotein diacylglyceryl transferase BEN74_08640 PF00303 Thymidylate synthase BEN74_08645 PF00186 Dihydrofolate reductase BEN74_08660 PF01625 Peptide methionine sulfoxide reductase BEN74_08670 PF01618 MotA/TolQ/ExbB proton channel family BEN74_08680 PF00551 Formyl transferase BEN74_08680 PF01842 ACT domain BEN74_08685 PF08360 QacR-like protein, C-terminal region BEN74_08685 PF00440 Bacterial regulatory proteins, tetR family BEN74_08690 PF00171 Aldehyde dehydrogenase family BEN74_08695 PF00830 Ribosomal L28 family BEN74_08700 PF00471 Ribosomal protein L33 BEN74_08705 PF00999 Sodium/hydrogen exchanger family BEN74_08705 PF02254 TrkA-N domain BEN74_08735 PF13361 UvrD-like helicase C-terminal domain BEN74_08735 PF00580 UvrD/REP helicase N-terminal domain BEN74_08740 PF02595 Glycerate kinase family BEN74_08760 PF08272 Topoisomerase I zinc-ribbon-like BEN74_08760 PF01131 DNA topoisomerase BEN74_08760 PF01396 Topoisomerase DNA binding C4 zinc finger BEN74_08760 PF01751 Toprim domain BEN74_08790 PF03279 Bacterial lipid A biosynthesis acyltransferase BEN74_08805 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEN74_08805 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN74_08825 PF01416 tRNA pseudouridine synthase BEN74_08840 PF01176 Translation initiation factor 1A / IF-1 BEN74_08875 PF00180 Isocitrate/isopropylmalate dehydrogenase BEN74_08885 PF00694 Aconitase C-terminal domain BEN74_08890 PF00330 Aconitase family (aconitate hydratase) BEN74_08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_08905 PF03466 LysR substrate binding domain BEN74_08910 PF04055 Radical SAM superfamily BEN74_08910 PF06969 HemN C-terminal domain BEN74_08925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BEN74_08925 PF08501 Shikimate dehydrogenase substrate binding domain BEN74_08925 PF01488 Shikimate / quinate 5-dehydrogenase BEN74_08935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_08935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_08935 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN74_08935 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_08940 PF01757 Acyltransferase family BEN74_08940 PF01168 Alanine racemase, N-terminal domain BEN74_08940 PF00842 Alanine racemase, C-terminal domain BEN74_08945 PF01979 Amidohydrolase family BEN74_08950 PF02646 RmuC family BEN74_08960 PF02646 RmuC family BEN74_08965 PF06969 HemN C-terminal domain BEN74_08965 PF04055 Radical SAM superfamily BEN74_08975 PF01554 MatE BEN74_08985 PF03109 ABC1 family BEN74_08990 PF01197 Ribosomal protein L31 BEN74_08995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BEN74_09015 PF01209 ubiE/COQ5 methyltransferase family BEN74_09030 PF13614 AAA domain BEN74_09035 PF01594 AI-2E family transporter BEN74_09040 PF00080 Copper/zinc superoxide dismutase (SODC) BEN74_09050 PF12823 Domain of unknown function (DUF3817) BEN74_09055 PF07690 Major Facilitator Superfamily BEN74_09070 PF02913 FAD linked oxidases, C-terminal domain BEN74_09070 PF01565 FAD binding domain BEN74_09075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN74_09075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN74_09080 PF00892 EamA-like transporter family BEN74_09090 PF00892 EamA-like transporter family BEN74_09095 PF01925 Sulfite exporter TauE/SafE BEN74_09100 PF01509 TruB family pseudouridylate synthase (N terminal domain) BEN74_09100 PF16198 tRNA pseudouridylate synthase B C-terminal domain BEN74_09100 PF09157 Pseudouridine synthase II TruB, C-terminal BEN74_09105 PF03280 Proteobacterial lipase chaperone protein BEN74_09110 PF00561 alpha/beta hydrolase fold BEN74_09115 PF00561 alpha/beta hydrolase fold BEN74_09120 PF01245 Ribosomal protein L19 BEN74_09125 PF01746 tRNA (Guanine-1)-methyltransferase BEN74_09130 PF01782 RimM N-terminal domain BEN74_09130 PF05239 PRC-barrel domain BEN74_09135 PF00886 Ribosomal protein S16 BEN74_09140 PF07963 Prokaryotic N-terminal methylation motif BEN74_09140 PF00114 Pilin (bacterial filament) BEN74_09145 PF00114 Pilin (bacterial filament) BEN74_09145 PF07963 Prokaryotic N-terminal methylation motif BEN74_09150 PF05567 Neisseria PilC beta-propeller domain BEN74_09170 PF07963 Prokaryotic N-terminal methylation motif BEN74_09175 PF02401 LytB protein BEN74_09180 PF00625 Guanylate kinase BEN74_09185 PF01192 RNA polymerase Rpb6 BEN74_09190 PF13291 ACT domain BEN74_09190 PF04607 Region found in RelA / SpoT proteins BEN74_09190 PF02824 TGS domain BEN74_09195 PF01042 Endoribonuclease L-PSP BEN74_09200 PF04324 BFD-like [2Fe-2S] binding domain BEN74_09205 PF00210 Ferritin-like domain BEN74_09220 PF00144 Beta-lactamase BEN74_09230 PF00114 Pilin (bacterial filament) BEN74_09230 PF07963 Prokaryotic N-terminal methylation motif BEN74_09240 PF04536 TPM domain BEN74_09245 PF04011 LemA family BEN74_09255 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_09255 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEN74_09260 PF00310 Glutamine amidotransferases class-II BEN74_09260 PF04898 Glutamate synthase central domain BEN74_09260 PF01645 Conserved region in glutamate synthase BEN74_09260 PF01493 GXGXG motif BEN74_09270 PF01761 3-dehydroquinate synthase BEN74_09275 PF01202 Shikimate kinase BEN74_09280 PF11741 AMIN domain BEN74_09280 PF00263 Bacterial type II and III secretion system protein BEN74_09280 PF03958 Bacterial type II/III secretion system short domain BEN74_09280 PF07660 Secretin and TonB N terminus short domain BEN74_09305 PF17092 Penicillin-binding protein OB-like domain BEN74_09305 PF00905 Penicillin binding protein transpeptidase domain BEN74_09305 PF00912 Transglycosylase BEN74_09310 PF13847 Methyltransferase domain BEN74_09315 PF00953 Glycosyl transferase family 4 BEN74_09320 PF08245 Mur ligase middle domain BEN74_09320 PF02875 Mur ligase family, glutamate ligase domain BEN74_09320 PF01225 Mur ligase family, catalytic domain BEN74_09325 PF02875 Mur ligase family, glutamate ligase domain BEN74_09325 PF08245 Mur ligase middle domain BEN74_09325 PF01225 Mur ligase family, catalytic domain BEN74_09330 PF03717 Penicillin-binding Protein dimerisation domain BEN74_09330 PF00905 Penicillin binding protein transpeptidase domain BEN74_09335 PF04999 Cell division protein FtsL BEN74_09340 PF01795 MraW methylase family BEN74_09360 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN74_09380 PF01545 Cation efflux family BEN74_09390 PF12848 ABC transporter BEN74_09390 PF00005 ABC transporter BEN74_09395 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN74_09400 PF00106 short chain dehydrogenase BEN74_09405 PF01502 Phosphoribosyl-AMP cyclohydrolase BEN74_09420 PF00361 Proton-conducting membrane transporter BEN74_09420 PF13244 Domain of unknown function (DUF4040) BEN74_09420 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BEN74_09420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN74_09425 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN74_09430 PF00361 Proton-conducting membrane transporter BEN74_09440 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BEN74_09455 PF02033 Ribosome-binding factor A BEN74_09460 PF04760 Translation initiation factor IF-2, N-terminal region BEN74_09460 PF00009 Elongation factor Tu GTP binding domain BEN74_09460 PF08364 Bacterial translation initiation factor IF-2 associated region BEN74_09460 PF11987 Translation-initiation factor 2 BEN74_09465 PF00575 S1 RNA binding domain BEN74_09465 PF08529 NusA N-terminal domain BEN74_09465 PF13184 NusA-like KH domain BEN74_09470 PF02576 RimP N-terminal domain BEN74_09470 PF17384 RimP C-terminal SH3 domain BEN74_09500 PF03840 Preprotein translocase SecG subunit BEN74_09505 PF00121 Triosephosphate isomerase BEN74_09510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BEN74_09510 PF00437 Type II/IV secretion system protein BEN74_09515 PF00482 Type II secretion system (T2SS), protein F BEN74_09520 PF06750 Bacterial Peptidase A24 N-terminal domain BEN74_09520 PF01478 Type IV leader peptidase family BEN74_09525 PF01121 Dephospho-CoA kinase BEN74_09535 PF00588 SpoU rRNA Methylase family BEN74_09535 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN74_09540 PF06865 Pyrimidine/purine nucleoside phosphorylase BEN74_09545 PF02463 RecF/RecN/SMC N terminal domain BEN74_09570 PF02622 Uncharacterized ACR, COG1678 BEN74_09575 PF03652 Holliday junction resolvase BEN74_09590 PF01895 PhoU domain BEN74_09600 PF13667 ThiC-associated domain BEN74_09600 PF01964 Radical SAM ThiC family BEN74_09605 PF00293 NUDIX domain BEN74_09610 PF00149 Calcineurin-like phosphoesterase BEN74_09615 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEN74_09620 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN74_09625 PF01098 Cell cycle protein BEN74_09630 PF08245 Mur ligase middle domain BEN74_09630 PF02875 Mur ligase family, glutamate ligase domain BEN74_09640 PF07664 Ferrous iron transport protein B C terminus BEN74_09640 PF07670 Nucleoside recognition BEN74_09640 PF02421 Ferrous iron transport protein B BEN74_09650 PF00589 Phage integrase family BEN74_09650 PF02899 Phage integrase, N-terminal SAM-like domain BEN74_09655 PF10411 Disulfide bond isomerase protein N-terminus BEN74_09655 PF13098 Thioredoxin-like domain BEN74_09660 PF01842 ACT domain BEN74_09660 PF03447 Homoserine dehydrogenase, NAD binding domain BEN74_09660 PF00742 Homoserine dehydrogenase BEN74_09665 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_09680 PF00768 D-alanyl-D-alanine carboxypeptidase BEN74_09685 PF00072 Response regulator receiver domain BEN74_09685 PF00196 Bacterial regulatory proteins, luxR family BEN74_09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_09690 PF00512 His Kinase A (phospho-acceptor) domain BEN74_09695 PF02954 Bacterial regulatory protein, Fis family BEN74_09695 PF00158 Sigma-54 interaction domain BEN74_09695 PF00072 Response regulator receiver domain BEN74_09700 PF03572 Peptidase family S41 BEN74_09700 PF00595 PDZ domain BEN74_09705 PF01676 Metalloenzyme superfamily BEN74_09705 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BEN74_09710 PF03739 Lipopolysaccharide export system permease LptF/LptG BEN74_09715 PF03739 Lipopolysaccharide export system permease LptF/LptG BEN74_09720 PF00883 Cytosol aminopeptidase family, catalytic domain BEN74_09720 PF02789 Cytosol aminopeptidase family, N-terminal domain BEN74_09740 PF09335 SNARE associated Golgi protein BEN74_09745 PF00677 Lumazine binding domain BEN74_09755 PF01872 RibD C-terminal domain BEN74_09755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEN74_09760 PF03477 ATP cone domain BEN74_09765 PF00909 Ammonium Transporter Family BEN74_09770 PF00543 Nitrogen regulatory protein P-II BEN74_09780 PF13335 Magnesium chelatase, subunit ChlI C-terminal BEN74_09780 PF01078 Magnesium chelatase, subunit ChlI BEN74_09795 PF03573 outer membrane porin, OprD family BEN74_09800 PF00719 Inorganic pyrophosphatase BEN74_09815 PF00501 AMP-binding enzyme BEN74_09815 PF13193 AMP-binding enzyme C-terminal domain BEN74_09820 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN74_09820 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN74_09825 PF07690 Major Facilitator Superfamily BEN74_09830 PF03458 UPF0126 domain BEN74_09835 PF02810 SEC-C motif BEN74_09840 PF03471 Transporter associated domain BEN74_09840 PF03741 Integral membrane protein TerC family BEN74_09845 PF03641 Possible lysine decarboxylase BEN74_09850 PF07690 Major Facilitator Superfamily BEN74_09860 PF00817 impB/mucB/samB family BEN74_09860 PF11799 impB/mucB/samB family C-terminal domain BEN74_09860 PF11798 IMS family HHH motif BEN74_09870 PF00072 Response regulator receiver domain BEN74_09870 PF00486 Transcriptional regulatory protein, C terminal BEN74_09875 PF00672 HAMP domain BEN74_09875 PF00512 His Kinase A (phospho-acceptor) domain BEN74_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_09880 PF06123 Inner membrane protein CreD BEN74_09900 PF11842 Domain of unknown function (DUF3362) BEN74_09900 PF08497 Radical SAM N-terminal BEN74_09900 PF04055 Radical SAM superfamily BEN74_09905 PF00990 Diguanylate cyclase, GGDEF domain BEN74_09905 PF00072 Response regulator receiver domain BEN74_09915 PF02028 BCCT, betaine/carnitine/choline family transporter BEN74_09930 PF00474 Sodium:solute symporter family BEN74_09935 PF04341 Protein of unknown function, DUF485 BEN74_09940 PF00512 His Kinase A (phospho-acceptor) domain BEN74_09940 PF00072 Response regulator receiver domain BEN74_09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_09940 PF09456 RcsC Alpha-Beta-Loop (ABL) BEN74_09950 PF00196 Bacterial regulatory proteins, luxR family BEN74_09950 PF00072 Response regulator receiver domain BEN74_09955 PF03358 NADPH-dependent FMN reductase BEN74_09960 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BEN74_09965 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN74_09965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN74_09970 PF00231 ATP synthase BEN74_09975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN74_09975 PF00306 ATP synthase alpha/beta chain, C terminal domain BEN74_09975 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN74_09980 PF00213 ATP synthase delta (OSCP) subunit BEN74_09985 PF00430 ATP synthase B/B' CF(0) BEN74_09990 PF00137 ATP synthase subunit C BEN74_09995 PF00119 ATP synthase A chain BEN74_10015 PF00005 ABC transporter BEN74_10020 PF00950 ABC 3 transport family BEN74_10035 PF04261 Dyp-type peroxidase family BEN74_10075 PF01327 Polypeptide deformylase BEN74_10085 PF02481 DNA recombination-mediator protein A BEN74_10085 PF17782 DprA winged helix domain BEN74_10090 PF01300 Telomere recombination BEN74_10095 PF00892 EamA-like transporter family BEN74_10105 PF00255 Glutathione peroxidase BEN74_10125 PF09828 Chromate resistance exported protein BEN74_10135 PF16177 Acetyl-coenzyme A synthetase N-terminus BEN74_10135 PF00501 AMP-binding enzyme BEN74_10135 PF13193 AMP-binding enzyme C-terminal domain BEN74_10140 PF00924 Mechanosensitive ion channel BEN74_10145 PF04452 RNA methyltransferase BEN74_10150 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BEN74_10155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN74_10180 PF01368 DHH family BEN74_10180 PF02272 DHHA1 domain BEN74_10180 PF17768 RecJ OB domain BEN74_10185 PF01243 Pyridoxamine 5'-phosphate oxidase BEN74_10185 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BEN74_10190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN74_10190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN74_10190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN74_10190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN74_10195 PF00478 IMP dehydrogenase / GMP reductase domain BEN74_10195 PF00571 CBS domain BEN74_10205 PF03692 Putative zinc- or iron-chelating domain BEN74_10210 PF01613 Flavin reductase like domain BEN74_10210 PF00258 Flavodoxin BEN74_10215 PF01169 Uncharacterized protein family UPF0016 BEN74_10220 PF02817 e3 binding domain BEN74_10220 PF00364 Biotin-requiring enzyme BEN74_10220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN74_10225 PF17831 Pyruvate dehydrogenase E1 component middle domain BEN74_10225 PF00456 Transketolase, thiamine diphosphate binding domain BEN74_10240 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BEN74_10245 PF12327 FtsZ family, C-terminal domain BEN74_10245 PF00091 Tubulin/FtsZ family, GTPase domain BEN74_10250 PF02491 SHS2 domain inserted in FTSA BEN74_10255 PF03799 Cell division protein FtsQ BEN74_10255 PF08478 POTRA domain, FtsQ-type BEN74_10260 PF07478 D-ala D-ala ligase C-terminus BEN74_10260 PF01820 D-ala D-ala ligase N-terminus BEN74_10265 PF01225 Mur ligase family, catalytic domain BEN74_10265 PF02875 Mur ligase family, glutamate ligase domain BEN74_10265 PF08245 Mur ligase middle domain BEN74_10270 PF04101 Glycosyltransferase family 28 C-terminal domain BEN74_10270 PF03033 Glycosyltransferase family 28 N-terminal domain BEN74_10280 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEN74_10280 PF00925 GTP cyclohydrolase II BEN74_10285 PF00885 6,7-dimethyl-8-ribityllumazine synthase BEN74_10290 PF01029 NusB family BEN74_10295 PF00586 AIR synthase related protein, N-terminal domain BEN74_10295 PF02769 AIR synthase related protein, C-terminal domain BEN74_10300 PF04608 Phosphatidylglycerophosphatase A BEN74_10305 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_10305 PF14602 Hexapeptide repeat of succinyl-transferase BEN74_10305 PF12804 MobA-like NTP transferase domain BEN74_10310 PF01380 SIS domain BEN74_10315 PF08721 TnsA endonuclease C terminal BEN74_10315 PF08722 TnsA endonuclease N terminal BEN74_10320 PF00665 Integrase core domain BEN74_10325 PF11426 Tn7 transposition regulator TnsC BEN74_10325 PF13401 AAA domain BEN74_10330 PF15978 Tn7-like transposition protein D BEN74_10330 PF06527 TniQ BEN74_10350 PF00145 C-5 cytosine-specific DNA methylase BEN74_10370 PF01381 Helix-turn-helix BEN74_10380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN74_10380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN74_10380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN74_10380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN74_10385 PF16363 GDP-mannose 4,6 dehydratase BEN74_10390 PF00342 Phosphoglucose isomerase BEN74_10395 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN74_10395 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN74_10395 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN74_10400 PF00483 Nucleotidyl transferase BEN74_10405 PF02719 Polysaccharide biosynthesis protein BEN74_10410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEN74_10415 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_10415 PF14602 Hexapeptide repeat of succinyl-transferase BEN74_10415 PF17836 PglD N-terminal domain BEN74_10420 PF02397 Bacterial sugar transferase BEN74_10435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEN74_10435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEN74_10470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN74_10470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN74_10470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN74_10475 PF02350 UDP-N-acetylglucosamine 2-epimerase BEN74_10480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN74_10480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN74_10480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN74_10485 PF10531 SLBB domain BEN74_10485 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BEN74_10485 PF02563 Polysaccharide biosynthesis/export protein BEN74_10490 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN74_10495 PF13614 AAA domain BEN74_10495 PF13807 G-rich domain on putative tyrosine kinase BEN74_10495 PF02706 Chain length determinant protein BEN74_10500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN74_10500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN74_10505 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN74_10505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN74_10520 PF10576 Iron-sulfur binding domain of endonuclease III BEN74_10520 PF00633 Helix-hairpin-helix motif BEN74_10520 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN74_10520 PF14815 NUDIX domain BEN74_10535 PF03352 Methyladenine glycosylase BEN74_10540 PF08240 Alcohol dehydrogenase GroES-like domain BEN74_10540 PF00107 Zinc-binding dehydrogenase BEN74_10560 PF01113 Dihydrodipicolinate reductase, N-terminus BEN74_10560 PF05173 Dihydrodipicolinate reductase, C-terminus BEN74_10565 PF15864 Protein glycosylation ligase BEN74_10565 PF11846 Virulence factor membrane-bound polymerase, C-terminal BEN74_10565 PF04932 O-Antigen ligase BEN74_10570 PF01556 DnaJ C terminal domain BEN74_10570 PF00684 DnaJ central domain BEN74_10570 PF00226 DnaJ domain BEN74_10580 PF00873 AcrB/AcrD/AcrF family BEN74_10595 PF00311 Phosphoenolpyruvate carboxylase BEN74_10600 PF00860 Permease family BEN74_10630 PF00120 Glutamine synthetase, catalytic domain BEN74_10645 PF00920 Dehydratase family BEN74_10655 PF00691 OmpA family BEN74_10655 PF01389 OmpA-like transmembrane domain BEN74_10680 PF00209 Sodium:neurotransmitter symporter family BEN74_10685 PF06940 Domain of unknown function (DUF1287) BEN74_10695 PF07690 Major Facilitator Superfamily BEN74_10725 PF00579 tRNA synthetases class I (W and Y) BEN74_10730 PF03702 Anhydro-N-acetylmuramic acid kinase BEN74_10735 PF13406 Transglycosylase SLT domain BEN74_10740 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BEN74_10740 PF02222 ATP-grasp domain BEN74_10745 PF00731 AIR carboxylase BEN74_10755 PF01225 Mur ligase family, catalytic domain BEN74_10755 PF02875 Mur ligase family, glutamate ligase domain BEN74_10755 PF08245 Mur ligase middle domain BEN74_10780 PF03741 Integral membrane protein TerC family BEN74_10795 PF01979 Amidohydrolase family BEN74_10805 PF00156 Phosphoribosyl transferase domain BEN74_10810 PF04226 Transglycosylase associated protein BEN74_10820 PF16916 Dimerisation domain of Zinc Transporter BEN74_10820 PF01545 Cation efflux family BEN74_10825 PF02583 Metal-sensitive transcriptional repressor BEN74_10835 PF02661 Fic/DOC family BEN74_10835 PF13784 Fic/DOC family N-terminal BEN74_10840 PF01926 50S ribosome-binding GTPase BEN74_10840 PF10396 GTP-binding protein TrmE N-terminus BEN74_10840 PF12631 MnmE helical domain BEN74_10845 PF02096 60Kd inner membrane protein BEN74_10845 PF14849 YidC periplasmic domain BEN74_10850 PF01809 Putative membrane protein insertion efficiency factor BEN74_10855 PF00825 Ribonuclease P BEN74_10860 PF00468 Ribosomal protein L34 BEN74_10865 PF11638 DnaA N-terminal domain BEN74_10865 PF08299 Bacterial dnaA protein helix-turn-helix BEN74_10865 PF00308 Bacterial dnaA protein BEN74_10870 PF00712 DNA polymerase III beta subunit, N-terminal domain BEN74_10870 PF02768 DNA polymerase III beta subunit, C-terminal domain BEN74_10870 PF02767 DNA polymerase III beta subunit, central domain BEN74_10875 PF02463 RecF/RecN/SMC N terminal domain BEN74_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_10880 PF18053 DNA gyrase B subunit insert domain BEN74_10880 PF00986 DNA gyrase B subunit, carboxyl terminus BEN74_10880 PF00204 DNA gyrase B BEN74_10880 PF01751 Toprim domain BEN74_10895 PF00005 ABC transporter BEN74_10895 PF12848 ABC transporter BEN74_10915 PF01521 Iron-sulphur cluster biosynthesis BEN74_10930 PF00012 Hsp70 protein BEN74_10935 PF01025 GrpE BEN74_10945 PF07859 alpha/beta hydrolase fold BEN74_10955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEN74_10985 PF07690 Major Facilitator Superfamily BEN74_11000 PF01965 DJ-1/PfpI family BEN74_11015 PF00082 Subtilase family BEN74_11030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN74_11035 PF01252 Signal peptidase (SPase) II BEN74_11040 PF06827 Zinc finger found in FPG and IleRS BEN74_11040 PF00133 tRNA synthetases class I (I, L, M and V) BEN74_11040 PF08264 Anticodon-binding domain of tRNA BEN74_11045 PF01687 Riboflavin kinase BEN74_11045 PF06574 FAD synthetase BEN74_11060 PF00440 Bacterial regulatory proteins, tetR family BEN74_11060 PF08362 YcdC-like protein, C-terminal region BEN74_11070 PF00296 Luciferase-like monooxygenase BEN74_11075 PF00583 Acetyltransferase (GNAT) family BEN74_11075 PF00696 Amino acid kinase family BEN74_11100 PF00106 short chain dehydrogenase BEN74_11105 PF13419 Haloacid dehalogenase-like hydrolase BEN74_11115 PF01323 DSBA-like thioredoxin domain BEN74_11120 PF00440 Bacterial regulatory proteins, tetR family BEN74_11125 PF01138 3' exoribonuclease family, domain 1 BEN74_11125 PF03725 3' exoribonuclease family, domain 2 BEN74_11130 PF01189 16S rRNA methyltransferase RsmB/F BEN74_11130 PF01029 NusB family BEN74_11135 PF02911 Formyl transferase, C-terminal domain BEN74_11135 PF00551 Formyl transferase BEN74_11140 PF00920 Dehydratase family BEN74_11145 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BEN74_11145 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BEN74_11150 PF01510 N-acetylmuramoyl-L-alanine amidase BEN74_11155 PF03023 Lipid II flippase MurJ BEN74_11160 PF07043 Protein of unknown function (DUF1328) BEN74_11165 PF03692 Putative zinc- or iron-chelating domain BEN74_11170 PF00563 EAL domain BEN74_11170 PF08447 PAS fold BEN74_11170 PF00990 Diguanylate cyclase, GGDEF domain BEN74_11170 PF08448 PAS fold BEN74_11175 PF00004 ATPase family associated with various cellular activities (AAA) BEN74_11175 PF12002 MgsA AAA+ ATPase C terminal BEN74_11175 PF16193 AAA C-terminal domain BEN74_11180 PF01259 SAICAR synthetase BEN74_11190 PF00701 Dihydrodipicolinate synthetase family BEN74_11200 PF07690 Major Facilitator Superfamily BEN74_11205 PF00857 Isochorismatase family BEN74_11210 PF01758 Sodium Bile acid symporter family BEN74_11215 PF02503 Polyphosphate kinase middle domain BEN74_11215 PF13090 Polyphosphate kinase C-terminal domain 2 BEN74_11215 PF17941 Polyphosphate kinase C-terminal domain 1 BEN74_11215 PF13089 Polyphosphate kinase N-terminal domain BEN74_11240 PF02580 D-Tyr-tRNA(Tyr) deacylase BEN74_11245 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BEN74_11245 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BEN74_11250 PF00581 Rhodanese-like domain BEN74_11255 PF02666 Phosphatidylserine decarboxylase BEN74_11265 PF05746 DALR anticodon binding domain BEN74_11265 PF00750 tRNA synthetases class I (R) BEN74_11265 PF03485 Arginyl tRNA synthetase N terminal domain BEN74_11275 PF04286 Protein of unknown function (DUF445) BEN74_11290 PF04262 Glutamate-cysteine ligase BEN74_11295 PF02600 Disulfide bond formation protein DsbB BEN74_11310 PF01751 Toprim domain BEN74_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_11310 PF00986 DNA gyrase B subunit, carboxyl terminus BEN74_11310 PF00204 DNA gyrase B BEN74_11345 PF02683 Cytochrome C biogenesis protein transmembrane region BEN74_11345 PF11412 Disulphide bond corrector protein DsbC BEN74_11350 PF07694 5TMR of 5TMR-LYT BEN74_11350 PF00990 Diguanylate cyclase, GGDEF domain BEN74_11355 PF02525 Flavodoxin-like fold BEN74_11360 PF07859 alpha/beta hydrolase fold BEN74_11375 PF03372 Endonuclease/Exonuclease/phosphatase family BEN74_11380 PF00156 Phosphoribosyl transferase domain BEN74_11385 PF07715 TonB-dependent Receptor Plug Domain BEN74_11385 PF00593 TonB dependent receptor BEN74_11395 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BEN74_11395 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BEN74_11400 PF00171 Aldehyde dehydrogenase family BEN74_11415 PF00465 Iron-containing alcohol dehydrogenase BEN74_11420 PF00005 ABC transporter BEN74_11425 PF01032 FecCD transport family BEN74_11430 PF01032 FecCD transport family BEN74_11435 PF01497 Periplasmic binding protein BEN74_11440 PF04954 Siderophore-interacting protein BEN74_11440 PF08021 Siderophore-interacting FAD-binding domain BEN74_11450 PF00106 short chain dehydrogenase BEN74_11455 PF00425 chorismate binding enzyme BEN74_11460 PF00501 AMP-binding enzyme BEN74_11460 PF13193 AMP-binding enzyme C-terminal domain BEN74_11465 PF00857 Isochorismatase family BEN74_11465 PF00550 Phosphopantetheine attachment site BEN74_11470 PF00857 Isochorismatase family BEN74_11470 PF00550 Phosphopantetheine attachment site BEN74_11475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEN74_11475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEN74_11480 PF04542 Sigma-70 region 2 BEN74_11480 PF08281 Sigma-70, region 4 BEN74_11490 PF00593 TonB dependent receptor BEN74_11490 PF07715 TonB-dependent Receptor Plug Domain BEN74_11540 PF13614 AAA domain BEN74_11560 PF09335 SNARE associated Golgi protein BEN74_11565 PF02540 NAD synthase BEN74_11565 PF00958 GMP synthase C terminal domain BEN74_11565 PF00117 Glutamine amidotransferase class-I BEN74_11575 PF00145 C-5 cytosine-specific DNA methylase BEN74_11580 PF00990 Diguanylate cyclase, GGDEF domain BEN74_11580 PF00072 Response regulator receiver domain BEN74_11585 PF02678 Pirin BEN74_11585 PF05726 Pirin C-terminal cupin domain BEN74_11600 PF00512 His Kinase A (phospho-acceptor) domain BEN74_11600 PF00989 PAS fold BEN74_11600 PF11808 Phosphate regulon sensor protein PhoR BEN74_11600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_11605 PF00072 Response regulator receiver domain BEN74_11605 PF00486 Transcriptional regulatory protein, C terminal BEN74_11615 PF00106 short chain dehydrogenase BEN74_11620 PF01554 MatE BEN74_11635 PF17760 UvrA interaction domain BEN74_11635 PF17755 UvrA DNA-binding domain BEN74_11655 PF07690 Major Facilitator Superfamily BEN74_11660 PF00436 Single-strand binding protein family BEN74_11670 PF02899 Phage integrase, N-terminal SAM-like domain BEN74_11670 PF00589 Phage integrase family BEN74_11720 PF01381 Helix-turn-helix BEN74_11725 PF13086 AAA domain BEN74_11725 PF13195 Protein of unknown function (DUF4011) BEN74_11725 PF13087 AAA domain BEN74_11735 PF00578 AhpC/TSA family BEN74_11735 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN74_11740 PF03466 LysR substrate binding domain BEN74_11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_11745 PF00857 Isochorismatase family BEN74_11750 PF02678 Pirin BEN74_11750 PF05726 Pirin C-terminal cupin domain BEN74_11755 PF01593 Flavin containing amine oxidoreductase BEN74_11785 PF02705 K+ potassium transporter BEN74_11800 PF12833 Helix-turn-helix domain BEN74_11800 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN74_11815 PF00977 Histidine biosynthesis protein BEN74_11820 PF01636 Phosphotransferase enzyme family BEN74_11840 PF01381 Helix-turn-helix BEN74_11850 PF00977 Histidine biosynthesis protein BEN74_11870 PF00117 Glutamine amidotransferase class-I BEN74_11875 PF00475 Imidazoleglycerol-phosphate dehydratase BEN74_11925 PF03848 Tellurite resistance protein TehB BEN74_11925 PF09313 Domain of unknown function (DUF1971) BEN74_11935 PF13737 Transposase DDE domain BEN74_11950 PF11724 YvbH-like oligomerisation region BEN74_11950 PF08000 Bacterial PH domain BEN74_11955 PF00108 Thiolase, N-terminal domain BEN74_11955 PF02803 Thiolase, C-terminal domain BEN74_11960 PF00378 Enoyl-CoA hydratase/isomerase BEN74_11960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN74_11960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN74_11980 PF01541 GIY-YIG catalytic domain BEN74_11980 PF02151 UvrB/uvrC motif BEN74_11980 PF08459 UvrC Helix-hairpin-helix N-terminal BEN74_11990 PF01066 CDP-alcohol phosphatidyltransferase BEN74_11995 PF04362 Bacterial Fe(2+) trafficking BEN74_12000 PF14698 Argininosuccinate lyase C-terminal BEN74_12000 PF00206 Lyase BEN74_12005 PF06580 Histidine kinase BEN74_12005 PF07694 5TMR of 5TMR-LYT BEN74_12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_12010 PF00072 Response regulator receiver domain BEN74_12010 PF04397 LytTr DNA-binding domain BEN74_12015 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BEN74_12015 PF03900 Porphobilinogen deaminase, C-terminal domain BEN74_12040 PF00816 H-NS histone family BEN74_12055 PF00263 Bacterial type II and III secretion system protein BEN74_12055 PF03958 Bacterial type II/III secretion system short domain BEN74_12060 PF00498 FHA domain BEN74_12060 PF12401 Protein of unknown function (DUF2662) BEN74_12065 PF13419 Haloacid dehalogenase-like hydrolase BEN74_12070 PF04715 Anthranilate synthase component I, N terminal region BEN74_12070 PF00425 chorismate binding enzyme BEN74_12095 PF03144 Elongation factor Tu domain 2 BEN74_12095 PF03143 Elongation factor Tu C-terminal domain BEN74_12095 PF00009 Elongation factor Tu GTP binding domain BEN74_12105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BEN74_12110 PF02357 Transcription termination factor nusG BEN74_12110 PF00467 KOW motif BEN74_12115 PF00298 Ribosomal protein L11, RNA binding domain BEN74_12115 PF03946 Ribosomal protein L11, N-terminal domain BEN74_12120 PF00687 Ribosomal protein L1p/L10e family BEN74_12125 PF00466 Ribosomal protein L10 BEN74_12130 PF00542 Ribosomal protein L7/L12 C-terminal domain BEN74_12130 PF16320 Ribosomal protein L7/L12 dimerisation domain BEN74_12135 PF04563 RNA polymerase beta subunit BEN74_12135 PF10385 RNA polymerase beta subunit external 1 domain BEN74_12135 PF00562 RNA polymerase Rpb2, domain 6 BEN74_12135 PF04560 RNA polymerase Rpb2, domain 7 BEN74_12135 PF04565 RNA polymerase Rpb2, domain 3 BEN74_12135 PF04561 RNA polymerase Rpb2, domain 2 BEN74_12140 PF05000 RNA polymerase Rpb1, domain 4 BEN74_12140 PF04997 RNA polymerase Rpb1, domain 1 BEN74_12140 PF04998 RNA polymerase Rpb1, domain 5 BEN74_12140 PF04983 RNA polymerase Rpb1, domain 3 BEN74_12140 PF00623 RNA polymerase Rpb1, domain 2 BEN74_12165 PF03553 Na+/H+ antiporter family BEN74_12165 PF13726 Na+-H+ antiporter family BEN74_12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_12180 PF00183 Hsp90 protein BEN74_12210 PF03466 LysR substrate binding domain BEN74_12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_12215 PF01810 LysE type translocator BEN74_12220 PF01323 DSBA-like thioredoxin domain BEN74_12230 PF00171 Aldehyde dehydrogenase family BEN74_12235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN74_12235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN74_12240 PF00501 AMP-binding enzyme BEN74_12240 PF13193 AMP-binding enzyme C-terminal domain BEN74_12245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_12245 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_12245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_12250 PF00378 Enoyl-CoA hydratase/isomerase BEN74_12255 PF00378 Enoyl-CoA hydratase/isomerase BEN74_12260 PF00083 Sugar (and other) transporter BEN74_12260 PF07690 Major Facilitator Superfamily BEN74_12270 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEN74_12270 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEN74_12275 PF00672 HAMP domain BEN74_12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_12275 PF00512 His Kinase A (phospho-acceptor) domain BEN74_12280 PF00486 Transcriptional regulatory protein, C terminal BEN74_12280 PF00072 Response regulator receiver domain BEN74_12285 PF17674 HHH domain BEN74_12285 PF16921 Tex protein YqgF-like domain BEN74_12285 PF09371 Tex-like protein N-terminal domain BEN74_12285 PF00575 S1 RNA binding domain BEN74_12310 PF03109 ABC1 family BEN74_12320 PF01209 ubiE/COQ5 methyltransferase family BEN74_12330 PF03976 Polyphosphate kinase 2 (PPK2) BEN74_12340 PF17946 RecC C-terminal domain BEN74_12345 PF00580 UvrD/REP helicase N-terminal domain BEN74_12345 PF13361 UvrD-like helicase C-terminal domain BEN74_12345 PF12705 PD-(D/E)XK nuclease superfamily BEN74_12350 PF13538 UvrD-like helicase C-terminal domain BEN74_12355 PF00312 Ribosomal protein S15 BEN74_12360 PF00013 KH domain BEN74_12360 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BEN74_12360 PF01138 3' exoribonuclease family, domain 1 BEN74_12360 PF03725 3' exoribonuclease family, domain 2 BEN74_12360 PF00575 S1 RNA binding domain BEN74_12365 PF01544 CorA-like Mg2+ transporter protein BEN74_12370 PF04325 Protein of unknown function (DUF465) BEN74_12380 PF00226 DnaJ domain BEN74_12380 PF01556 DnaJ C terminal domain BEN74_12400 PF01430 Hsp33 protein BEN74_12405 PF00999 Sodium/hydrogen exchanger family BEN74_12405 PF02254 TrkA-N domain BEN74_12410 PF00271 Helicase conserved C-terminal domain BEN74_12410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BEN74_12410 PF17764 3′ DNA-binding domain (3′BD) BEN74_12410 PF18074 Primosomal protein N C-terminal domain BEN74_12410 PF00270 DEAD/DEAH box helicase BEN74_12415 PF00482 Type II secretion system (T2SS), protein F BEN74_12420 PF07963 Prokaryotic N-terminal methylation motif BEN74_12420 PF08334 Type II secretion system (T2SS), protein G BEN74_12430 PF00795 Carbon-nitrogen hydrolase BEN74_12435 PF03471 Transporter associated domain BEN74_12435 PF00571 CBS domain BEN74_12440 PF01206 Sulfurtransferase TusA BEN74_12465 PF01177 Asp/Glu/Hydantoin racemase BEN74_12475 PF00762 Ferrochelatase BEN74_12480 PF00753 Metallo-beta-lactamase superfamily BEN74_12485 PF03884 DNA gyrase inhibitor YacG BEN74_12495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEN74_12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_12525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN74_12525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN74_12550 PF02092 Glycyl-tRNA synthetase beta subunit BEN74_12550 PF05746 DALR anticodon binding domain BEN74_12555 PF02091 Glycyl-tRNA synthetase alpha subunit BEN74_12575 PF04024 PspC domain BEN74_12600 PF00501 AMP-binding enzyme BEN74_12600 PF13193 AMP-binding enzyme C-terminal domain BEN74_12605 PF00575 S1 RNA binding domain BEN74_12605 PF10150 Ribonuclease E/G family BEN74_12605 PF12111 Polyribonucleotide phosphorylase C terminal BEN74_12610 PF00849 RNA pseudouridylate synthase BEN74_12610 PF01479 S4 domain BEN74_12615 PF13419 Haloacid dehalogenase-like hydrolase BEN74_12620 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEN74_12625 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN74_12625 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BEN74_12630 PF00682 HMGL-like BEN74_12630 PF07836 DmpG-like communication domain BEN74_12635 PF03573 outer membrane porin, OprD family BEN74_12640 PF00561 alpha/beta hydrolase fold BEN74_12650 PF03466 LysR substrate binding domain BEN74_12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_12655 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BEN74_12655 PF00355 Rieske [2Fe-2S] domain BEN74_12660 PF00866 Ring hydroxylating beta subunit BEN74_12665 PF00355 Rieske [2Fe-2S] domain BEN74_12670 PF00106 short chain dehydrogenase BEN74_12675 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN74_12680 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_12680 PF14759 Reductase C-terminal BEN74_12685 PF00892 EamA-like transporter family BEN74_12700 PF00141 Peroxidase BEN74_12715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_12715 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_12715 PF18158 Adaptive response protein AidB N-terminal domain BEN74_12725 PF01037 Lrp/AsnC ligand binding domain BEN74_12725 PF13404 AsnC-type helix-turn-helix domain BEN74_12730 PF01810 LysE type translocator BEN74_12740 PF00391 PEP-utilising enzyme, mobile domain BEN74_12740 PF01590 GAF domain BEN74_12740 PF02896 PEP-utilising enzyme, TIM barrel domain BEN74_12740 PF05524 PEP-utilising enzyme, N-terminal BEN74_12745 PF00293 NUDIX domain BEN74_12770 PF00925 GTP cyclohydrolase II BEN74_12775 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BEN74_12775 PF02779 Transketolase, pyrimidine binding domain BEN74_12775 PF02780 Transketolase, C-terminal domain BEN74_12780 PF00459 Inositol monophosphatase family BEN74_12785 PF12343 Cold shock protein DEAD box A BEN74_12785 PF00271 Helicase conserved C-terminal domain BEN74_12785 PF03880 DbpA RNA binding domain BEN74_12785 PF00270 DEAD/DEAH box helicase BEN74_12790 PF00005 ABC transporter BEN74_12795 PF02405 Permease MlaE BEN74_12815 PF01544 CorA-like Mg2+ transporter protein BEN74_12820 PF03641 Possible lysine decarboxylase BEN74_12825 PF00293 NUDIX domain BEN74_12830 PF00156 Phosphoribosyl transferase domain BEN74_12835 PF00271 Helicase conserved C-terminal domain BEN74_12835 PF00270 DEAD/DEAH box helicase BEN74_12835 PF17191 RecG wedge domain BEN74_12850 PF01553 Acyltransferase BEN74_12865 PF00375 Sodium:dicarboxylate symporter family BEN74_12875 PF01926 50S ribosome-binding GTPase BEN74_12880 PF02082 Transcriptional regulator BEN74_12885 PF00175 Oxidoreductase NAD-binding domain BEN74_12885 PF00042 Globin BEN74_12885 PF00970 Oxidoreductase FAD-binding domain BEN74_12890 PF05872 Bacterial protein of unknown function (DUF853) BEN74_12895 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN74_12905 PF00338 Ribosomal protein S10p/S20e BEN74_12910 PF00297 Ribosomal protein L3 BEN74_12915 PF00573 Ribosomal protein L4/L1 family BEN74_12920 PF00276 Ribosomal protein L23 BEN74_12925 PF03947 Ribosomal Proteins L2, C-terminal domain BEN74_12925 PF00181 Ribosomal Proteins L2, RNA binding domain BEN74_12930 PF00203 Ribosomal protein S19 BEN74_12935 PF00237 Ribosomal protein L22p/L17e BEN74_12940 PF00189 Ribosomal protein S3, C-terminal domain BEN74_12940 PF07650 KH domain BEN74_12945 PF00252 Ribosomal protein L16p/L10e BEN74_12950 PF00831 Ribosomal L29 protein BEN74_12955 PF00366 Ribosomal protein S17 BEN74_12960 PF00238 Ribosomal protein L14p/L23e BEN74_12965 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BEN74_12965 PF00467 KOW motif BEN74_12970 PF00281 Ribosomal protein L5 BEN74_12970 PF00673 ribosomal L5P family C-terminus BEN74_12975 PF00253 Ribosomal protein S14p/S29e BEN74_12980 PF00410 Ribosomal protein S8 BEN74_12985 PF00347 Ribosomal protein L6 BEN74_12990 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BEN74_12995 PF00333 Ribosomal protein S5, N-terminal domain BEN74_12995 PF03719 Ribosomal protein S5, C-terminal domain BEN74_13000 PF00327 Ribosomal protein L30p/L7e BEN74_13005 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BEN74_13010 PF00344 SecY translocase BEN74_13015 PF00444 Ribosomal protein L36 BEN74_13020 PF00416 Ribosomal protein S13/S18 BEN74_13025 PF00411 Ribosomal protein S11 BEN74_13030 PF01479 S4 domain BEN74_13030 PF00163 Ribosomal protein S4/S9 N-terminal domain BEN74_13035 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BEN74_13035 PF01000 RNA polymerase Rpb3/RpoA insert domain BEN74_13035 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BEN74_13040 PF01196 Ribosomal protein L17 BEN74_13045 PF00743 Flavin-binding monooxygenase-like BEN74_13050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_13050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN74_13050 PF02770 Acyl-CoA dehydrogenase, middle domain BEN74_13055 PF03937 Flavinator of succinate dehydrogenase BEN74_13085 PF09526 Probable metal-binding protein (DUF2387) BEN74_13090 PF01432 Peptidase family M3 BEN74_13095 PF08206 Ribonuclease B OB domain BEN74_13095 PF08461 Ribonuclease R winged-helix domain BEN74_13095 PF00773 RNB domain BEN74_13095 PF17876 Cold shock domain BEN74_13095 PF00575 S1 RNA binding domain BEN74_13125 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEN74_13135 PF00072 Response regulator receiver domain BEN74_13135 PF12833 Helix-turn-helix domain BEN74_13145 PF03631 Virulence factor BrkB BEN74_13150 PF03358 NADPH-dependent FMN reductase BEN74_13190 PF02130 Uncharacterized protein family UPF0054 BEN74_13195 PF02562 PhoH-like protein BEN74_13200 PF01938 TRAM domain BEN74_13200 PF00919 Uncharacterized protein family UPF0004 BEN74_13200 PF04055 Radical SAM superfamily BEN74_13205 PF01551 Peptidase family M23 BEN74_13205 PF01464 Transglycosylase SLT domain BEN74_13205 PF10145 Phage-related minor tail protein BEN74_13215 PF00056 lactate/malate dehydrogenase, NAD binding domain BEN74_13215 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BEN74_13230 PF01725 Ham1 family BEN74_13250 PF00561 alpha/beta hydrolase fold BEN74_13250 PF07021 Methionine biosynthesis protein MetW BEN74_13255 PF00561 alpha/beta hydrolase fold BEN74_13260 PF00682 HMGL-like BEN74_13260 PF08502 LeuA allosteric (dimerisation) domain BEN74_13265 PF01070 FMN-dependent dehydrogenase BEN74_13270 PF13640 2OG-Fe(II) oxygenase superfamily BEN74_13270 PF18331 PKHD-type hydroxylase C-terminal domain BEN74_13275 PF07715 TonB-dependent Receptor Plug Domain BEN74_13275 PF00593 TonB dependent receptor BEN74_13280 PF00593 TonB dependent receptor BEN74_13280 PF07715 TonB-dependent Receptor Plug Domain BEN74_13285 PF00593 TonB dependent receptor BEN74_13285 PF07715 TonB-dependent Receptor Plug Domain BEN74_13290 PF05697 Bacterial trigger factor protein (TF) BEN74_13290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN74_13290 PF05698 Bacterial trigger factor protein (TF) C-terminus BEN74_13295 PF00574 Clp protease BEN74_13300 PF06689 ClpX C4-type zinc finger BEN74_13300 PF10431 C-terminal, D2-small domain, of ClpB protein BEN74_13300 PF07724 AAA domain (Cdc48 subfamily) BEN74_13315 PF05681 Fumarate hydratase (Fumerase) BEN74_13315 PF05683 Fumarase C-terminus BEN74_13320 PF12833 Helix-turn-helix domain BEN74_13335 PF02705 K+ potassium transporter BEN74_13340 PF07085 DRTGG domain BEN74_13340 PF01515 Phosphate acetyl/butaryl transferase BEN74_13345 PF00871 Acetokinase family BEN74_13355 PF00171 Aldehyde dehydrogenase family BEN74_13360 PF00561 alpha/beta hydrolase fold BEN74_13370 PF00933 Glycosyl hydrolase family 3 N terminal domain BEN74_13375 PF17804 Tail specific protease N-terminal domain BEN74_13375 PF00595 PDZ domain BEN74_13375 PF03572 Peptidase family S41 BEN74_13375 PF11818 C-terminal domain of tail specific protease (DUF3340) BEN74_13385 PF03707 Bacterial signalling protein N terminal repeat BEN74_13385 PF00990 Diguanylate cyclase, GGDEF domain BEN74_13385 PF00563 EAL domain BEN74_13390 PF00009 Elongation factor Tu GTP binding domain BEN74_13390 PF03144 Elongation factor Tu domain 2 BEN74_13390 PF16658 Class II release factor RF3, C-terminal domain BEN74_13405 PF01026 TatD related DNase BEN74_13435 PF07690 Major Facilitator Superfamily BEN74_13445 PF09278 MerR, DNA binding BEN74_13445 PF00376 MerR family regulatory protein BEN74_13450 PF00892 EamA-like transporter family BEN74_13465 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BEN74_13465 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEN74_13470 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BEN74_13475 PF02233 NAD(P) transhydrogenase beta subunit BEN74_13490 PF01261 Xylose isomerase-like TIM barrel BEN74_13495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN74_13495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN74_13500 PF00378 Enoyl-CoA hydratase/isomerase BEN74_13505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEN74_13505 PF00072 Response regulator receiver domain BEN74_13505 PF01627 Hpt domain BEN74_13505 PF00512 His Kinase A (phospho-acceptor) domain BEN74_13505 PF00672 HAMP domain BEN74_13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_13510 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_13520 PF05958 tRNA (Uracil-5-)-methyltransferase BEN74_13525 PF04607 Region found in RelA / SpoT proteins BEN74_13525 PF02824 TGS domain BEN74_13525 PF13291 ACT domain BEN74_13540 PF00550 Phosphopantetheine attachment site BEN74_13545 PF00550 Phosphopantetheine attachment site BEN74_13555 PF07977 FabA-like domain BEN74_13560 PF00795 Carbon-nitrogen hydrolase BEN74_13560 PF00535 Glycosyl transferase family 2 BEN74_13570 PF00221 Aromatic amino acid lyase BEN74_13590 PF04820 Tryptophan halogenase BEN74_13600 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN74_13600 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN74_13615 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN74_13615 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN74_13625 PF01648 4'-phosphopantetheinyl transferase superfamily BEN74_13630 PF02355 Protein export membrane protein BEN74_13630 PF07549 SecD/SecF GG Motif BEN74_13635 PF02355 Protein export membrane protein BEN74_13635 PF13721 SecD export protein N-terminal TM region BEN74_13635 PF07549 SecD/SecF GG Motif BEN74_13640 PF02699 Preprotein translocase subunit BEN74_13645 PF01702 Queuine tRNA-ribosyltransferase BEN74_13650 PF04011 LemA family BEN74_13660 PF02547 Queuosine biosynthesis protein BEN74_13670 PF03971 Monomeric isocitrate dehydrogenase BEN74_13675 PF13426 PAS domain BEN74_13675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_13675 PF00672 HAMP domain BEN74_13675 PF00512 His Kinase A (phospho-acceptor) domain BEN74_13680 PF03710 Glutamate-ammonia ligase adenylyltransferase BEN74_13680 PF08335 GlnD PII-uridylyltransferase BEN74_13685 PF01063 Amino-transferase class IV BEN74_13700 PF01522 Polysaccharide deacetylase BEN74_13705 PF00535 Glycosyl transferase family 2 BEN74_13730 PF16363 GDP-mannose 4,6 dehydratase BEN74_13735 PF00483 Nucleotidyl transferase BEN74_13740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEN74_13745 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_13750 PF02709 N-terminal domain of galactosyltransferase BEN74_13750 PF00535 Glycosyl transferase family 2 BEN74_13770 PF01336 OB-fold nucleic acid binding domain BEN74_13770 PF02938 GAD domain BEN74_13770 PF00152 tRNA synthetases class II (D, K and N) BEN74_13780 PF07715 TonB-dependent Receptor Plug Domain BEN74_13780 PF00593 TonB dependent receptor BEN74_13790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BEN74_13820 PF01923 Cobalamin adenosyltransferase BEN74_13825 PF00593 TonB dependent receptor BEN74_13825 PF07715 TonB-dependent Receptor Plug Domain BEN74_13830 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEN74_13835 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_13870 PF00290 Tryptophan synthase alpha chain BEN74_13875 PF01039 Carboxyl transferase domain BEN74_13880 PF02875 Mur ligase family, glutamate ligase domain BEN74_13880 PF08245 Mur ligase middle domain BEN74_13895 PF00753 Metallo-beta-lactamase superfamily BEN74_13900 PF00578 AhpC/TSA family BEN74_13900 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN74_13905 PF07517 SecA DEAD-like domain BEN74_13905 PF01043 SecA preprotein cross-linking domain BEN74_13905 PF07516 SecA Wing and Scaffold domain BEN74_13905 PF02810 SEC-C motif BEN74_13915 PF01960 ArgJ family BEN74_13920 PF02445 Quinolinate synthetase A protein BEN74_13945 PF00691 OmpA family BEN74_13950 PF00990 Diguanylate cyclase, GGDEF domain BEN74_13950 PF07694 5TMR of 5TMR-LYT BEN74_14015 PF04386 Stringent starvation protein B BEN74_14020 PF00043 Glutathione S-transferase, C-terminal domain BEN74_14020 PF02798 Glutathione S-transferase, N-terminal domain BEN74_14025 PF00380 Ribosomal protein S9/S16 BEN74_14030 PF00572 Ribosomal protein L13 BEN74_14035 PF12833 Helix-turn-helix domain BEN74_14035 PF02311 AraC-like ligand binding domain BEN74_14040 PF02515 CoA-transferase family III BEN74_14045 PF04966 Carbohydrate-selective porin, OprB family BEN74_14050 PF01011 PQQ enzyme repeat BEN74_14055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN74_14055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN74_14085 PF00108 Thiolase, N-terminal domain BEN74_14085 PF02803 Thiolase, C-terminal domain BEN74_14090 PF07963 Prokaryotic N-terminal methylation motif BEN74_14090 PF00114 Pilin (bacterial filament) BEN74_14095 PF00691 OmpA family BEN74_14095 PF13505 Outer membrane protein beta-barrel domain BEN74_14105 PF00324 Amino acid permease BEN74_14110 PF08468 Methyltransferase small domain N-terminal BEN74_14110 PF05175 Methyltransferase small domain BEN74_14115 PF00860 Permease family BEN74_14125 PF01741 Large-conductance mechanosensitive channel, MscL BEN74_14135 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BEN74_14135 PF06827 Zinc finger found in FPG and IleRS BEN74_14135 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BEN74_14145 PF07715 TonB-dependent Receptor Plug Domain BEN74_14145 PF00593 TonB dependent receptor BEN74_14150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN74_14175 PF01571 Aminomethyltransferase folate-binding domain BEN74_14180 PF00694 Aconitase C-terminal domain BEN74_14180 PF00330 Aconitase family (aconitate hydratase) BEN74_14195 PF01850 PIN domain BEN74_14235 PF00849 RNA pseudouridylate synthase BEN74_14260 PF04343 Protein of unknown function, DUF488 BEN74_14270 PF08274 PhnA Zinc-Ribbon BEN74_14270 PF03831 PhnA domain BEN74_14280 PF07411 Domain of unknown function (DUF1508) BEN74_14295 PF00293 NUDIX domain BEN74_14305 PF08543 Phosphomethylpyrimidine kinase BEN74_14305 PF02581 Thiamine monophosphate synthase BEN74_14305 PF03070 TENA/THI-4/PQQC family BEN74_14310 PF13419 Haloacid dehalogenase-like hydrolase BEN74_14315 PF00083 Sugar (and other) transporter BEN74_14320 PF01266 FAD dependent oxidoreductase BEN74_14330 PF01207 Dihydrouridine synthase (Dus) BEN74_14355 PF02978 Signal peptide binding domain BEN74_14355 PF02881 SRP54-type protein, helical bundle domain BEN74_14355 PF00448 SRP54-type protein, GTPase domain BEN74_14360 PF06821 Serine hydrolase BEN74_14365 PF03309 Type III pantothenate kinase BEN74_14375 PF01925 Sulfite exporter TauE/SafE BEN74_14385 PF02463 RecF/RecN/SMC N terminal domain BEN74_14385 PF06470 SMC proteins Flexible Hinge Domain BEN74_14395 PF01653 NAD-dependent DNA ligase adenylation domain BEN74_14395 PF00533 BRCA1 C Terminus (BRCT) domain BEN74_14395 PF03120 NAD-dependent DNA ligase OB-fold domain BEN74_14395 PF12826 Helix-hairpin-helix motif BEN74_14395 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BEN74_14400 PF00593 TonB dependent receptor BEN74_14400 PF07715 TonB-dependent Receptor Plug Domain BEN74_14415 PF00210 Ferritin-like domain BEN74_14420 PF00578 AhpC/TSA family BEN74_14430 PF12697 Alpha/beta hydrolase family BEN74_14430 PF08241 Methyltransferase domain BEN74_14435 PF00202 Aminotransferase class-III BEN74_14435 PF04055 Radical SAM superfamily BEN74_14435 PF06968 Biotin and Thiamin Synthesis associated domain BEN74_14440 PF00155 Aminotransferase class I and II BEN74_14445 PF08241 Methyltransferase domain BEN74_14445 PF04301 Protein of unknown function (DUF452) BEN74_14455 PF00849 RNA pseudouridylate synthase BEN74_14455 PF01479 S4 domain BEN74_14460 PF04079 Segregation and condensation complex subunit ScpB BEN74_14465 PF02616 Segregation and condensation protein ScpA BEN74_14475 PF01300 Telomere recombination BEN74_14480 PF04315 Elongation factor P hydroxylase BEN74_14485 PF02620 Large ribosomal RNA subunit accumulation protein YceD BEN74_14490 PF01783 Ribosomal L32p protein family BEN74_14495 PF00698 Acyl transferase domain BEN74_14505 PF00550 Phosphopantetheine attachment site BEN74_14510 PF01037 Lrp/AsnC ligand binding domain BEN74_14515 PF01266 FAD dependent oxidoreductase BEN74_14520 PF00842 Alanine racemase, C-terminal domain BEN74_14520 PF01168 Alanine racemase, N-terminal domain BEN74_14525 PF01042 Endoribonuclease L-PSP BEN74_14530 PF00324 Amino acid permease BEN74_14535 PF01757 Acyltransferase family BEN74_14545 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN74_14545 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN74_14555 PF00164 Ribosomal protein S12/S23 BEN74_14560 PF00177 Ribosomal protein S7p/S5e BEN74_14565 PF00009 Elongation factor Tu GTP binding domain BEN74_14565 PF03764 Elongation factor G, domain IV BEN74_14565 PF14492 Elongation Factor G, domain II BEN74_14565 PF03144 Elongation factor Tu domain 2 BEN74_14565 PF00679 Elongation factor G C-terminus BEN74_14570 PF00009 Elongation factor Tu GTP binding domain BEN74_14570 PF03144 Elongation factor Tu domain 2 BEN74_14570 PF03143 Elongation factor Tu C-terminal domain BEN74_14580 PF00583 Acetyltransferase (GNAT) family BEN74_14585 PF04376 Arginine-tRNA-protein transferase, N terminus BEN74_14585 PF04377 Arginine-tRNA-protein transferase, C terminus BEN74_14590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BEN74_14595 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_14600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BEN74_14600 PF17854 FtsK alpha domain BEN74_14600 PF09397 Ftsk gamma domain BEN74_14600 PF01580 FtsK/SpoIIIE family BEN74_14610 PF03466 LysR substrate binding domain BEN74_14610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_14625 PF03776 Septum formation topological specificity factor MinE BEN74_14630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEN74_14635 PF03775 Septum formation inhibitor MinC, C-terminal domain BEN74_14645 PF01553 Acyltransferase BEN74_14650 PF04972 BON domain BEN74_14650 PF00691 OmpA family BEN74_14655 PF00580 UvrD/REP helicase N-terminal domain BEN74_14655 PF13361 UvrD-like helicase C-terminal domain BEN74_14660 PF00692 dUTPase BEN74_14665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN74_14665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN74_14665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN74_14665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN74_14670 PF00696 Amino acid kinase family BEN74_14680 PF13230 Glutamine amidotransferases class-II BEN74_14685 PF01814 Hemerythrin HHE cation binding domain BEN74_14700 PF03658 RnfH family Ubiquitin BEN74_14710 PF04355 SmpA / OmlA family BEN74_14715 PF01475 Ferric uptake regulator family BEN74_14720 PF00437 Type II/IV secretion system protein BEN74_14725 PF00437 Type II/IV secretion system protein BEN74_14730 PF01168 Alanine racemase, N-terminal domain BEN74_14750 PF00149 Calcineurin-like phosphoesterase BEN74_14750 PF12320 Type 5 capsule protein repressor C-terminal domain BEN74_14770 PF13460 NAD(P)H-binding BEN74_14770 PF11066 Protein of unknown function (DUF2867) BEN74_14775 PF01266 FAD dependent oxidoreductase BEN74_14780 PF00490 Delta-aminolevulinic acid dehydratase BEN74_14785 PF03061 Thioesterase superfamily BEN74_14790 PF00529 HlyD membrane-fusion protein of T1SS BEN74_14790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN74_14795 PF07690 Major Facilitator Superfamily BEN74_14805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEN74_14805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEN74_14815 PF13356 Arm DNA-binding domain BEN74_14815 PF00589 Phage integrase family BEN74_14830 PF13333 Integrase core domain BEN74_14830 PF00665 Integrase core domain BEN74_14830 PF13276 HTH-like domain BEN74_14885 PF02384 N-6 DNA Methylase BEN74_14885 PF12161 HsdM N-terminal domain BEN74_14900 PF18766 SWI2/SNF2 ATPase BEN74_14900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BEN74_14900 PF11867 Domain of unknown function (DUF3387) BEN74_14930 PF02661 Fic/DOC family BEN74_14930 PF13784 Fic/DOC family N-terminal BEN74_14940 PF13784 Fic/DOC family N-terminal BEN74_14940 PF02661 Fic/DOC family BEN74_14945 PF00589 Phage integrase family BEN74_14945 PF13356 Arm DNA-binding domain BEN74_15120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BEN74_15125 PF00005 ABC transporter BEN74_15130 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_15135 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BEN74_15140 PF00701 Dihydrodipicolinate synthetase family BEN74_15145 PF00596 Class II Aldolase and Adducin N-terminal domain BEN74_15150 PF00155 Aminotransferase class I and II BEN74_15150 PF00392 Bacterial regulatory proteins, gntR family BEN74_15160 PF03594 Benzoate membrane transport protein BEN74_15165 PF00155 Aminotransferase class I and II BEN74_15165 PF00392 Bacterial regulatory proteins, gntR family BEN74_15175 PF04444 Catechol dioxygenase N terminus BEN74_15175 PF00775 Dioxygenase BEN74_15180 PF00175 Oxidoreductase NAD-binding domain BEN74_15180 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN74_15180 PF00970 Oxidoreductase FAD-binding domain BEN74_15190 PF04945 YHS domain BEN74_15190 PF02332 Methane/Phenol/Toluene Hydroxylase BEN74_15195 PF02406 MmoB/DmpM family BEN74_15200 PF02332 Methane/Phenol/Toluene Hydroxylase BEN74_15205 PF06099 Phenol hydroxylase subunit BEN74_15210 PF00158 Sigma-54 interaction domain BEN74_15210 PF02830 V4R domain BEN74_15210 PF06505 Activator of aromatic catabolism BEN74_15210 PF02954 Bacterial regulatory protein, Fis family BEN74_15220 PF03062 MBOAT, membrane-bound O-acyltransferase family BEN74_15240 PF07690 Major Facilitator Superfamily BEN74_15245 PF00171 Aldehyde dehydrogenase family BEN74_15245 PF01575 MaoC like domain BEN74_15250 PF05138 Phenylacetic acid catabolic protein BEN74_15255 PF06243 Phenylacetic acid degradation B BEN74_15260 PF05138 Phenylacetic acid catabolic protein BEN74_15265 PF01883 Iron-sulfur cluster assembly protein BEN74_15270 PF00970 Oxidoreductase FAD-binding domain BEN74_15270 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN74_15270 PF00175 Oxidoreductase NAD-binding domain BEN74_15275 PF00378 Enoyl-CoA hydratase/isomerase BEN74_15280 PF00378 Enoyl-CoA hydratase/isomerase BEN74_15285 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BEN74_15285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN74_15285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN74_15290 PF02803 Thiolase, C-terminal domain BEN74_15290 PF00108 Thiolase, N-terminal domain BEN74_15295 PF14535 AMP-binding enzyme C-terminal domain BEN74_15295 PF00501 AMP-binding enzyme BEN74_15300 PF08223 PaaX-like protein C-terminal domain BEN74_15300 PF07848 PaaX-like protein BEN74_15305 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_15310 PF03852 DNA mismatch endonuclease Vsr BEN74_15320 PF05992 SbmA/BacA-like family BEN74_15355 PF02637 GatB domain BEN74_15355 PF02934 GatB/GatE catalytic domain BEN74_15360 PF01425 Amidase BEN74_15365 PF02686 Glu-tRNAGln amidotransferase C subunit BEN74_15375 PF04085 rod shape-determining protein MreC BEN74_15385 PF02545 Maf-like protein BEN74_15390 PF00575 S1 RNA binding domain BEN74_15390 PF10150 Ribonuclease E/G family BEN74_15395 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BEN74_15395 PF06974 Protein of unknown function (DUF1298) BEN74_15400 PF01507 Phosphoadenosine phosphosulfate reductase family BEN74_15430 PF13954 PapC N-terminal domain BEN74_15430 PF00577 Outer membrane usher protein BEN74_15430 PF13953 PapC C-terminal domain BEN74_15445 PF00199 Catalase BEN74_15455 PF00324 Amino acid permease BEN74_15460 PF04303 PrpF protein BEN74_15465 PF08448 PAS fold BEN74_15465 PF00990 Diguanylate cyclase, GGDEF domain BEN74_15470 PF00348 Polyprenyl synthetase BEN74_15475 PF00474 Sodium:solute symporter family BEN74_15480 PF01145 SPFH domain / Band 7 family BEN74_15490 PF01734 Patatin-like phospholipase BEN74_15500 PF07690 Major Facilitator Superfamily BEN74_15515 PF07715 TonB-dependent Receptor Plug Domain BEN74_15515 PF00593 TonB dependent receptor BEN74_15520 PF08019 Phosphoethanolamine transferase EptA/EptB BEN74_15520 PF00884 Sulfatase BEN74_15525 PF00072 Response regulator receiver domain BEN74_15525 PF00486 Transcriptional regulatory protein, C terminal BEN74_15530 PF00512 His Kinase A (phospho-acceptor) domain BEN74_15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_15530 PF08521 Two-component sensor kinase N-terminal BEN74_15545 PF00909 Ammonium Transporter Family BEN74_15550 PF00005 ABC transporter BEN74_15555 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_15560 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_15565 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEN74_15580 PF04480 Protein of unknown function (DUF559) BEN74_15590 PF08264 Anticodon-binding domain of tRNA BEN74_15590 PF00133 tRNA synthetases class I (I, L, M and V) BEN74_15590 PF10458 Valyl tRNA synthetase tRNA binding arm BEN74_15610 PF01906 Putative heavy-metal-binding BEN74_15615 PF01906 Putative heavy-metal-binding BEN74_15620 PF02321 Outer membrane efflux protein BEN74_15625 PF00873 AcrB/AcrD/AcrF family BEN74_15630 PF00529 HlyD membrane-fusion protein of T1SS BEN74_15630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN74_15635 PF01569 PAP2 superfamily BEN74_15645 PF00348 Polyprenyl synthetase BEN74_15650 PF00829 Ribosomal prokaryotic L21 protein BEN74_15655 PF01016 Ribosomal L27 protein BEN74_15660 PF13018 Extended Signal Peptide of Type V secretion system BEN74_15660 PF03895 YadA-like membrane anchor domain BEN74_15660 PF05658 Head domain of trimeric autotransporter adhesin BEN74_15660 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN74_15665 PF03548 Outer membrane lipoprotein carrier protein LolA BEN74_15675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN74_15675 PF02403 Seryl-tRNA synthetase N-terminal domain BEN74_15680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEN74_15680 PF14824 Sirohaem biosynthesis protein central BEN74_15680 PF10414 Sirohaem synthase dimerisation region BEN74_15685 PF00588 SpoU rRNA Methylase family BEN74_15695 PF01638 HxlR-like helix-turn-helix BEN74_15700 PF03358 NADPH-dependent FMN reductase BEN74_15705 PF13520 Amino acid permease BEN74_15715 PF00465 Iron-containing alcohol dehydrogenase BEN74_15725 PF03099 Biotin/lipoate A/B protein ligase family BEN74_15730 PF04359 Protein of unknown function (DUF493) BEN74_15735 PF04545 Sigma-70, region 4 BEN74_15735 PF00140 Sigma-70 factor, region 1.2 BEN74_15735 PF04542 Sigma-70 region 2 BEN74_15735 PF04539 Sigma-70 region 3 BEN74_15735 PF03979 Sigma-70 factor, region 1.1 BEN74_15735 PF04546 Sigma-70, non-essential region BEN74_15755 PF09335 SNARE associated Golgi protein BEN74_15775 PF00440 Bacterial regulatory proteins, tetR family BEN74_15775 PF17932 Tetracyclin repressor-like, C-terminal domain BEN74_15785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEN74_15800 PF02261 Aspartate decarboxylase BEN74_15805 PF01195 Peptidyl-tRNA hydrolase BEN74_15810 PF01386 Ribosomal L25p family BEN74_15815 PF14572 Phosphoribosyl synthetase-associated domain BEN74_15815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BEN74_15840 PF08544 GHMP kinases C terminal BEN74_15840 PF00288 GHMP kinases N terminal domain BEN74_15845 PF03550 Outer membrane lipoprotein LolB BEN74_15855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BEN74_15855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BEN74_15855 PF01488 Shikimate / quinate 5-dehydrogenase BEN74_15860 PF13662 Toprim domain BEN74_15860 PF08275 DNA primase catalytic core, N-terminal domain BEN74_15860 PF08278 DNA primase DnaG DnaB-binding BEN74_15860 PF01807 CHC2 zinc finger BEN74_15860 PF10410 DnaB-helicase binding domain of primase BEN74_15865 PF13525 Outer membrane lipoprotein BEN74_15870 PF00849 RNA pseudouridylate synthase BEN74_15870 PF01479 S4 domain BEN74_15890 PF01668 SmpB protein BEN74_15895 PF01467 Cytidylyltransferase-like BEN74_15900 PF00037 4Fe-4S binding domain BEN74_15930 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_15940 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN74_15940 PF03449 Transcription elongation factor, N-terminal BEN74_15945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN74_15945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEN74_15945 PF02142 MGS-like domain BEN74_15950 PF00117 Glutamine amidotransferase class-I BEN74_15950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEN74_15965 PF01985 CRS1 / YhbY (CRM) domain BEN74_15970 PF01728 FtsJ-like methyltransferase BEN74_15975 PF00004 ATPase family associated with various cellular activities (AAA) BEN74_15975 PF01434 Peptidase family M41 BEN74_15975 PF06480 FtsH Extracellular BEN74_15975 PF17862 AAA+ lid domain BEN74_15980 PF00809 Pterin binding enzyme BEN74_16000 PF16655 PhoD-like phosphatase, N-terminal domain BEN74_16000 PF09423 PhoD-like phosphatase BEN74_16015 PF03471 Transporter associated domain BEN74_16015 PF01595 Cyclin M transmembrane N-terminal domain BEN74_16015 PF00571 CBS domain BEN74_16020 PF03466 LysR substrate binding domain BEN74_16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_16025 PF00463 Isocitrate lyase family BEN74_16030 PF01219 Prokaryotic diacylglycerol kinase BEN74_16035 PF00873 AcrB/AcrD/AcrF family BEN74_16040 PF00571 CBS domain BEN74_16040 PF01769 Divalent cation transporter BEN74_16040 PF03448 MgtE intracellular N domain BEN74_16050 PF01435 Peptidase family M48 BEN74_16055 PF01464 Transglycosylase SLT domain BEN74_16055 PF01551 Peptidase family M23 BEN74_16055 PF10145 Phage-related minor tail protein BEN74_16065 PF01171 PP-loop family BEN74_16075 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEN74_16075 PF01464 Transglycosylase SLT domain BEN74_16080 PF03449 Transcription elongation factor, N-terminal BEN74_16080 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN74_16120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN74_16120 PF11890 Domain of unknown function (DUF3410) BEN74_16120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN74_16125 PF00152 tRNA synthetases class II (D, K and N) BEN74_16140 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN74_16140 PF01743 Poly A polymerase head domain BEN74_16145 PF00390 Malic enzyme, N-terminal domain BEN74_16145 PF03949 Malic enzyme, NAD binding domain BEN74_16145 PF01515 Phosphate acetyl/butaryl transferase BEN74_16150 PF00563 EAL domain BEN74_16150 PF00990 Diguanylate cyclase, GGDEF domain BEN74_16150 PF03707 Bacterial signalling protein N terminal repeat BEN74_16150 PF13188 PAS domain BEN74_16155 PF04452 RNA methyltransferase BEN74_16160 PF02219 Methylenetetrahydrofolate reductase BEN74_16165 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BEN74_16165 PF05221 S-adenosyl-L-homocysteine hydrolase BEN74_16210 PF18073 Rubredoxin metal binding domain BEN74_16215 PF00324 Amino acid permease BEN74_16235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEN74_16235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEN74_16240 PF01678 Diaminopimelate epimerase BEN74_16250 PF00589 Phage integrase family BEN74_16250 PF02899 Phage integrase, N-terminal SAM-like domain BEN74_16255 PF01965 DJ-1/PfpI family BEN74_16260 PF00800 Prephenate dehydratase BEN74_16260 PF01817 Chorismate mutase type II BEN74_16260 PF01842 ACT domain BEN74_16265 PF00155 Aminotransferase class I and II BEN74_16270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN74_16290 PF03883 Peroxide stress protein YaaA BEN74_16305 PF00860 Permease family BEN74_16310 PF00962 Adenosine/AMP deaminase BEN74_16325 PF01351 Ribonuclease HII BEN74_16330 PF02599 Global regulator protein family BEN74_16335 PF01842 ACT domain BEN74_16335 PF13840 ACT domain BEN74_16335 PF00696 Amino acid kinase family BEN74_16345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN74_16345 PF02272 DHHA1 domain BEN74_16345 PF01411 tRNA synthetases class II (A) BEN74_16355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN74_16355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEN74_16370 PF03591 AzlC protein BEN74_16375 PF01037 Lrp/AsnC ligand binding domain BEN74_16390 PF13393 Histidyl-tRNA synthetase BEN74_16395 PF00709 Adenylosuccinate synthetase BEN74_16410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN74_16420 PF00768 D-alanyl-D-alanine carboxypeptidase BEN74_16420 PF07943 Penicillin-binding protein 5, C-terminal domain BEN74_16430 PF00155 Aminotransferase class I and II BEN74_16435 PF01641 SelR domain BEN74_16440 PF00255 Glutathione peroxidase BEN74_16455 PF00155 Aminotransferase class I and II BEN74_16460 PF01909 Nucleotidyltransferase domain BEN74_16460 PF01966 HD domain BEN74_16460 PF08335 GlnD PII-uridylyltransferase BEN74_16465 PF02222 ATP-grasp domain BEN74_16470 PF05437 Branched-chain amino acid transport protein (AzlD) BEN74_16475 PF03591 AzlC protein BEN74_16485 PF00027 Cyclic nucleotide-binding domain BEN74_16485 PF13545 Crp-like helix-turn-helix domain BEN74_16505 PF06071 Protein of unknown function (DUF933) BEN74_16505 PF01926 50S ribosome-binding GTPase BEN74_16510 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_16515 PF09383 NIL domain BEN74_16515 PF00005 ABC transporter BEN74_16520 PF03180 NLPA lipoprotein BEN74_16525 PF03180 NLPA lipoprotein BEN74_16530 PF00296 Luciferase-like monooxygenase BEN74_16540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN74_16540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN74_16545 PF13417 Glutathione S-transferase, N-terminal domain BEN74_16555 PF01709 Transcriptional regulator BEN74_16560 PF01553 Acyltransferase BEN74_16630 PF08448 PAS fold BEN74_16630 PF00990 Diguanylate cyclase, GGDEF domain BEN74_16635 PF01625 Peptide methionine sulfoxide reductase BEN74_16645 PF01641 SelR domain BEN74_16650 PF00462 Glutaredoxin BEN74_16655 PF01625 Peptide methionine sulfoxide reductase BEN74_16660 PF02311 AraC-like ligand binding domain BEN74_16660 PF12833 Helix-turn-helix domain BEN74_16685 PF00108 Thiolase, N-terminal domain BEN74_16685 PF02803 Thiolase, C-terminal domain BEN74_16690 PF00378 Enoyl-CoA hydratase/isomerase BEN74_16690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN74_16690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN74_16725 PF10544 T5orf172 domain BEN74_16735 PF07693 KAP family P-loop domain BEN74_16755 PF13817 IS66 C-terminal element BEN74_16755 PF13007 Transposase C of IS166 homeodomain BEN74_16755 PF13005 zinc-finger binding domain of transposase IS66 BEN74_16755 PF03050 Transposase IS66 family BEN74_16765 PF13737 Transposase DDE domain BEN74_16805 PF06463 Molybdenum Cofactor Synthesis C BEN74_16805 PF04055 Radical SAM superfamily BEN74_16825 PF00004 ATPase family associated with various cellular activities (AAA) BEN74_16825 PF07724 AAA domain (Cdc48 subfamily) BEN74_16825 PF02861 Clp amino terminal domain, pathogenicity island component BEN74_16825 PF17871 AAA lid domain BEN74_16825 PF10431 C-terminal, D2-small domain, of ClpB protein BEN74_16830 PF04055 Radical SAM superfamily BEN74_16840 PF00872 Transposase, Mutator family BEN74_16850 PF02384 N-6 DNA Methylase BEN74_16865 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BEN74_16865 PF18766 SWI2/SNF2 ATPase BEN74_16865 PF11867 Domain of unknown function (DUF3387) BEN74_16885 PF07715 TonB-dependent Receptor Plug Domain BEN74_16885 PF00593 TonB dependent receptor BEN74_16905 PF01126 Heme oxygenase BEN74_16945 PF17287 POTRA domain BEN74_16945 PF08479 POTRA domain, ShlB-type BEN74_16945 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BEN74_16950 PF15526 Novel toxin 21 BEN74_16950 PF04829 Pre-toxin domain with VENN motif BEN74_16950 PF13332 Hemagglutinin repeat BEN74_16950 PF05594 Haemagluttinin repeat BEN74_16950 PF05860 haemagglutination activity domain BEN74_16960 PF02463 RecF/RecN/SMC N terminal domain BEN74_16965 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_16965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN74_16970 PF04055 Radical SAM superfamily BEN74_16975 PF04055 Radical SAM superfamily BEN74_16975 PF06968 Biotin and Thiamin Synthesis associated domain BEN74_16980 PF08331 Domain of unknown function (DUF1730) BEN74_16985 PF03853 YjeF-related protein N-terminus BEN74_16985 PF01256 Carbohydrate kinase BEN74_17000 PF02075 Crossover junction endodeoxyribonuclease RuvC BEN74_17010 PF01810 LysE type translocator BEN74_17050 PF01596 O-methyltransferase BEN74_17065 PF07690 Major Facilitator Superfamily BEN74_17070 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN74_17070 PF00578 AhpC/TSA family BEN74_17075 PF00271 Helicase conserved C-terminal domain BEN74_17075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BEN74_17075 PF04408 Helicase associated domain (HA2) BEN74_17075 PF11898 Domain of unknown function (DUF3418) BEN74_17075 PF00270 DEAD/DEAH box helicase BEN74_17080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEN74_17080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN74_17090 PF05970 PIF1-like helicase BEN74_17090 PF14493 Helix-turn-helix domain BEN74_17095 PF00520 Ion transport protein BEN74_17095 PF00027 Cyclic nucleotide-binding domain BEN74_17100 PF03466 LysR substrate binding domain BEN74_17100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_17110 PF00206 Lyase BEN74_17110 PF08328 Adenylosuccinate lyase C-terminal BEN74_17115 PF04356 Protein of unknown function (DUF489) BEN74_17125 PF00293 NUDIX domain BEN74_17130 PF00107 Zinc-binding dehydrogenase BEN74_17130 PF16884 N-terminal domain of oxidoreductase BEN74_17145 PF01047 MarR family BEN74_17155 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_17160 PF00768 D-alanyl-D-alanine carboxypeptidase BEN74_17160 PF07943 Penicillin-binding protein 5, C-terminal domain BEN74_17175 PF01975 Survival protein SurE BEN74_17180 PF01476 LysM domain BEN74_17180 PF01551 Peptidase family M23 BEN74_17185 PF03466 LysR substrate binding domain BEN74_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_17215 PF01784 NIF3 (NGG1p interacting factor 3) BEN74_17220 PF00881 Nitroreductase family BEN74_17225 PF00378 Enoyl-CoA hydratase/isomerase BEN74_17230 PF01467 Cytidylyltransferase-like BEN74_17230 PF00293 NUDIX domain BEN74_17235 PF04264 YceI-like domain BEN74_17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_17240 PF03466 LysR substrate binding domain BEN74_17255 PF00578 AhpC/TSA family BEN74_17270 PF06508 Queuosine biosynthesis protein QueC BEN74_17275 PF04055 Radical SAM superfamily BEN74_17280 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BEN74_17280 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_17280 PF14602 Hexapeptide repeat of succinyl-transferase BEN74_17295 PF03466 LysR substrate binding domain BEN74_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_17300 PF12857 TOBE-like domain BEN74_17300 PF00005 ABC transporter BEN74_17305 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_17310 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_17340 PF02618 YceG-like family BEN74_17345 PF02223 Thymidylate kinase BEN74_17365 PF00890 FAD binding domain BEN74_17365 PF02910 Fumarate reductase flavoprotein C-term BEN74_17370 PF13180 PDZ domain BEN74_17380 PF06421 GTP-binding protein LepA C-terminus BEN74_17380 PF03144 Elongation factor Tu domain 2 BEN74_17380 PF00009 Elongation factor Tu GTP binding domain BEN74_17380 PF00679 Elongation factor G C-terminus BEN74_17385 PF10502 Signal peptidase, peptidase S26 BEN74_17395 PF00035 Double-stranded RNA binding motif BEN74_17395 PF14622 Ribonuclease-III-like BEN74_17400 PF01926 50S ribosome-binding GTPase BEN74_17400 PF07650 KH domain BEN74_17410 PF02565 Recombination protein O C terminal BEN74_17410 PF11967 Recombination protein O N terminal BEN74_17415 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BEN74_17420 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BEN74_17440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN74_17440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN74_17445 PF01784 NIF3 (NGG1p interacting factor 3) BEN74_17450 PF17820 PDZ domain BEN74_17450 PF13180 PDZ domain BEN74_17475 PF00990 Diguanylate cyclase, GGDEF domain BEN74_17485 PF00271 Helicase conserved C-terminal domain BEN74_17485 PF04851 Type III restriction enzyme, res subunit BEN74_17485 PF12344 Ultra-violet resistance protein B BEN74_17485 PF17757 UvrB interaction domain BEN74_17485 PF02151 UvrB/uvrC motif BEN74_17495 PF00892 EamA-like transporter family BEN74_17500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN74_17500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEN74_17505 PF05368 NmrA-like family BEN74_17510 PF01638 HxlR-like helix-turn-helix BEN74_17515 PF01018 GTP1/OBG BEN74_17515 PF01926 50S ribosome-binding GTPase BEN74_17520 PF01472 PUA domain BEN74_17520 PF00696 Amino acid kinase family BEN74_17525 PF01569 PAP2 superfamily BEN74_17535 PF00202 Aminotransferase class-III BEN74_17540 PF00282 Pyridoxal-dependent decarboxylase conserved domain BEN74_17550 PF12849 PBP superfamily domain BEN74_17555 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_17560 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_17565 PF00005 ABC transporter BEN74_17575 PF08496 Peptidase family S49 N-terminal BEN74_17575 PF01343 Peptidase family S49 BEN74_17580 PF00171 Aldehyde dehydrogenase family BEN74_17585 PF02566 OsmC-like protein BEN74_17590 PF13545 Crp-like helix-turn-helix domain BEN74_17590 PF00027 Cyclic nucleotide-binding domain BEN74_17595 PF00248 Aldo/keto reductase family BEN74_17605 PF00004 ATPase family associated with various cellular activities (AAA) BEN74_17605 PF07724 AAA domain (Cdc48 subfamily) BEN74_17605 PF10431 C-terminal, D2-small domain, of ClpB protein BEN74_17605 PF02861 Clp amino terminal domain, pathogenicity island component BEN74_17605 PF17871 AAA lid domain BEN74_17625 PF10672 S-adenosylmethionine-dependent methyltransferase BEN74_17625 PF01170 Putative RNA methylase family UPF0020 BEN74_17625 PF02926 THUMP domain BEN74_17635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN74_17635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN74_17640 PF01979 Amidohydrolase family BEN74_17660 PF05199 GMC oxidoreductase BEN74_17660 PF00732 GMC oxidoreductase BEN74_17665 PF00171 Aldehyde dehydrogenase family BEN74_17670 PF02390 Putative methyltransferase BEN74_17690 PF00043 Glutathione S-transferase, C-terminal domain BEN74_17690 PF02798 Glutathione S-transferase, N-terminal domain BEN74_17695 PF02525 Flavodoxin-like fold BEN74_17715 PF05690 Thiazole biosynthesis protein ThiG BEN74_17725 PF04241 Protein of unknown function (DUF423) BEN74_17730 PF00140 Sigma-70 factor, region 1.2 BEN74_17730 PF04542 Sigma-70 region 2 BEN74_17730 PF04545 Sigma-70, region 4 BEN74_17740 PF00313 'Cold-shock' DNA-binding domain BEN74_17745 PF00270 DEAD/DEAH box helicase BEN74_17745 PF00271 Helicase conserved C-terminal domain BEN74_17760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BEN74_17760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BEN74_17780 PF01180 Dihydroorotate dehydrogenase BEN74_17790 PF00156 Phosphoribosyl transferase domain BEN74_17805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN74_17805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN74_17810 PF01435 Peptidase family M48 BEN74_17810 PF07720 Tetratricopeptide repeat BEN74_17820 PF09424 Yqey-like protein BEN74_17825 PF01165 Ribosomal protein S21 BEN74_17830 PF00814 Glycoprotease family BEN74_17845 PF03793 PASTA domain BEN74_17845 PF00069 Protein kinase domain BEN74_17885 PF00753 Metallo-beta-lactamase superfamily BEN74_17885 PF16123 Hydroxyacylglutathione hydrolase C-terminus BEN74_17890 PF01613 Flavin reductase like domain BEN74_17900 PF02567 Phenazine biosynthesis-like protein BEN74_17905 PF05193 Peptidase M16 inactive domain BEN74_17905 PF00675 Insulinase (Peptidase family M16) BEN74_17920 PF01928 CYTH domain BEN74_17935 PF02581 Thiamine monophosphate synthase BEN74_17940 PF00202 Aminotransferase class-III BEN74_17960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN74_17965 PF12146 Serine aminopeptidase, S33 BEN74_17975 PF03466 LysR substrate binding domain BEN74_17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_17980 PF00849 RNA pseudouridylate synthase BEN74_17985 PF00176 SNF2 family N-terminal domain BEN74_17985 PF12137 RNA polymerase recycling family C-terminal BEN74_17985 PF18337 RapA N-terminal Tudor like domain BEN74_17985 PF00271 Helicase conserved C-terminal domain BEN74_17985 PF18339 RapA N-terminal Tudor like domain 1 BEN74_18015 PF00440 Bacterial regulatory proteins, tetR family BEN74_18020 PF00970 Oxidoreductase FAD-binding domain BEN74_18020 PF00175 Oxidoreductase NAD-binding domain BEN74_18020 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN74_18025 PF00487 Fatty acid desaturase BEN74_18065 PF07759 Protein of unknown function (DUF1615) BEN74_18085 PF01207 Dihydrouridine synthase (Dus) BEN74_18095 PF03060 Nitronate monooxygenase BEN74_18105 PF04143 Sulphur transport BEN74_18120 PF08803 Putative mono-oxygenase ydhR BEN74_18125 PF02772 S-adenosylmethionine synthetase, central domain BEN74_18125 PF02773 S-adenosylmethionine synthetase, C-terminal domain BEN74_18125 PF00438 S-adenosylmethionine synthetase, N-terminal domain BEN74_18130 PF00456 Transketolase, thiamine diphosphate binding domain BEN74_18130 PF02780 Transketolase, C-terminal domain BEN74_18130 PF02779 Transketolase, pyrimidine binding domain BEN74_18155 PF01810 LysE type translocator BEN74_18160 PF00958 GMP synthase C terminal domain BEN74_18160 PF00117 Glutamine amidotransferase class-I BEN74_18160 PF02540 NAD synthase BEN74_18185 PF00005 ABC transporter BEN74_18195 PF07690 Major Facilitator Superfamily BEN74_18200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN74_18200 PF04324 BFD-like [2Fe-2S] binding domain BEN74_18200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN74_18200 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_18200 PF13806 Rieske-like [2Fe-2S] domain BEN74_18200 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEN74_18205 PF04324 BFD-like [2Fe-2S] binding domain BEN74_18205 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEN74_18205 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN74_18205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN74_18205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN74_18210 PF04324 BFD-like [2Fe-2S] binding domain BEN74_18210 PF01568 Molydopterin dinucleotide binding domain BEN74_18210 PF00384 Molybdopterin oxidoreductase BEN74_18210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEN74_18215 PF12804 MobA-like NTP transferase domain BEN74_18220 PF04055 Radical SAM superfamily BEN74_18220 PF06463 Molybdenum Cofactor Synthesis C BEN74_18230 PF02391 MoaE protein BEN74_18235 PF01967 MoaC family BEN74_18235 PF00994 Probable molybdopterin binding domain BEN74_18240 PF03453 MoeA N-terminal region (domain I and II) BEN74_18240 PF03454 MoeA C-terminal region (domain IV) BEN74_18240 PF00994 Probable molybdopterin binding domain BEN74_18250 PF00528 Binding-protein-dependent transport system inner membrane component BEN74_18255 PF03459 TOBE domain BEN74_18255 PF00005 ABC transporter BEN74_18260 PF01406 tRNA synthetases class I (C) catalytic domain BEN74_18260 PF09190 DALR domain BEN74_18270 PF00571 CBS domain BEN74_18270 PF01380 SIS domain BEN74_18285 PF03968 OstA-like protein BEN74_18290 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEN74_18290 PF00005 ABC transporter BEN74_18295 PF01205 Uncharacterized protein family UPF0029 BEN74_18305 PF00582 Universal stress protein family BEN74_18310 PF01596 O-methyltransferase BEN74_18320 PF00037 4Fe-4S binding domain BEN74_18320 PF11953 Domain of unknown function (DUF3470) BEN74_18325 PF05192 MutS domain III BEN74_18325 PF00488 MutS domain V BEN74_18325 PF05188 MutS domain II BEN74_18325 PF01624 MutS domain I BEN74_18325 PF05190 MutS family domain IV BEN74_18330 PF00990 Diguanylate cyclase, GGDEF domain BEN74_18350 PF00132 Bacterial transferase hexapeptide (six repeats) BEN74_18355 PF00588 SpoU rRNA Methylase family BEN74_18360 PF14579 Helix-hairpin-helix motif BEN74_18360 PF02811 PHP domain BEN74_18360 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEN74_18360 PF01336 OB-fold nucleic acid binding domain BEN74_18360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEN74_18370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BEN74_18370 PF02843 Phosphoribosylglycinamide synthetase, C domain BEN74_18370 PF02844 Phosphoribosylglycinamide synthetase, N domain BEN74_18375 PF01808 AICARFT/IMPCHase bienzyme BEN74_18375 PF02142 MGS-like domain BEN74_18380 PF02954 Bacterial regulatory protein, Fis family BEN74_18405 PF13932 GidA associated domain BEN74_18405 PF01134 Glucose inhibited division protein A BEN74_18415 PF01649 Ribosomal protein S20 BEN74_18420 PF13460 NAD(P)H-binding BEN74_18425 PF03737 Aldolase/RraA BEN74_18435 PF00196 Bacterial regulatory proteins, luxR family BEN74_18435 PF00072 Response regulator receiver domain BEN74_18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN74_18440 PF07730 Histidine kinase BEN74_18445 PF08007 Cupin superfamily protein BEN74_18465 PF00782 Dual specificity phosphatase, catalytic domain BEN74_18470 PF12146 Serine aminopeptidase, S33 BEN74_18470 PF12147 Putative methyltransferase BEN74_18475 PF01066 CDP-alcohol phosphatidyltransferase BEN74_18480 PF04073 Aminoacyl-tRNA editing domain BEN74_18505 PF13419 Haloacid dehalogenase-like hydrolase BEN74_18515 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BEN74_18520 PF02277 Phosphoribosyltransferase BEN74_18525 PF00300 Histidine phosphatase superfamily (branch 1) BEN74_18530 PF02654 Cobalamin-5-phosphate synthase BEN74_18535 PF04172 LrgB-like family BEN74_18540 PF03788 LrgA family BEN74_18545 PF03466 LysR substrate binding domain BEN74_18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN74_18550 PF01638 HxlR-like helix-turn-helix BEN74_18570 PF02635 DsrE/DsrF-like family BEN74_18590 PF16363 GDP-mannose 4,6 dehydratase BEN74_18595 PF00206 Lyase BEN74_18595 PF10415 Fumarase C C-terminus BEN74_18610 PF00589 Phage integrase family BEN74_18610 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain BEN74_18650 PF13185 GAF domain BEN74_18650 PF00990 Diguanylate cyclase, GGDEF domain BEN74_18685 PF00772 DnaB-like helicase N terminal domain BEN74_18685 PF03796 DnaB-like helicase C terminal domain BEN74_18870 PF01654 Cytochrome bd terminal oxidase subunit I BEN74_18875 PF02322 Cytochrome bd terminal oxidase subunit II BEN74_18895 PF00881 Nitroreductase family BEN74_18900 PF03328 HpcH/HpaI aldolase/citrate lyase family BEN74_18905 PF02308 MgtC family BEN74_18910 PF00149 Calcineurin-like phosphoesterase BEN74_18915 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEN74_18920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BEN74_18920 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN74_18925 PF01062 Bestrophin, RFP-TM, chloride channel BEN74_18945 PF05958 tRNA (Uracil-5-)-methyltransferase BEN74_18950 PF00171 Aldehyde dehydrogenase family BEN74_18950 PF01619 Proline dehydrogenase BEN74_18950 PF14850 DNA-binding domain of Proline dehydrogenase BEN74_18950 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BEN74_18955 PF01037 Lrp/AsnC ligand binding domain BEN74_18960 PF00474 Sodium:solute symporter family BEN74_18965 PF00206 Lyase BEN74_18965 PF10415 Fumarase C C-terminus BEN74_18975 PF02559 CarD-like/TRCF domain BEN74_18975 PF00270 DEAD/DEAH box helicase BEN74_18975 PF00271 Helicase conserved C-terminal domain BEN74_18975 PF17757 UvrB interaction domain BEN74_18975 PF03461 TRCF domain BEN74_18985 PF00211 Adenylate and Guanylate cyclase catalytic domain BEN74_18990 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN74_18995 PF00012 Hsp70 protein BEN74_19000 PF00226 DnaJ domain BEN74_19000 PF07743 HSCB C-terminal oligomerisation domain BEN74_19005 PF01521 Iron-sulphur cluster biosynthesis BEN74_19010 PF01592 NifU-like N terminal domain BEN74_19015 PF00266 Aminotransferase class-V BEN74_19020 PF02082 Transcriptional regulator BEN74_19035 PF00216 Bacterial DNA-binding protein BEN74_19040 PF05698 Bacterial trigger factor protein (TF) C-terminus BEN74_19065 PF00294 pfkB family carbohydrate kinase BEN74_19080 PF05193 Peptidase M16 inactive domain BEN74_19080 PF00675 Insulinase (Peptidase family M16) BEN74_19080 PF08367 Peptidase M16C associated BEN74_19085 PF02253 Phospholipase A1 BEN74_19090 PF02386 Cation transport protein BEN74_19095 PF02254 TrkA-N domain BEN74_19095 PF02080 TrkA-C domain BEN74_19120 PF00291 Pyridoxal-phosphate dependent enzyme BEN74_19120 PF00585 C-terminal regulatory domain of Threonine dehydratase BEN74_19125 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BEN74_19135 PF17151 Periplasmic sensor domain BEN74_19135 PF00990 Diguanylate cyclase, GGDEF domain BEN74_19140 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN74_19140 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEN74_19150 PF02617 ATP-dependent Clp protease adaptor protein ClpS BEN74_19155 PF02861 Clp amino terminal domain, pathogenicity island component BEN74_19155 PF17871 AAA lid domain BEN74_19155 PF07724 AAA domain (Cdc48 subfamily) BEN74_19155 PF00004 ATPase family associated with various cellular activities (AAA) BEN74_19155 PF10431 C-terminal, D2-small domain, of ClpB protein BEN74_19160 PF02694 Uncharacterised BCR, YnfA/UPF0060 family