locus-tag	class	description
MMY79_00010	COG0592	DNA-directed DNA polymerase activity
MMY79_00020	COG0187	DNA topoisomerase II activity
MMY79_00035	COG0488	(ABC) transporter
MMY79_00060	COG0596	Alpha beta hydrolase
MMY79_00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
MMY79_00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MMY79_00105	COG0733	neurotransmitter:sodium symporter activity
MMY79_00145	COG2233	PERMEase
MMY79_00160	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MMY79_00195	COG2814	Major facilitator Superfamily
MMY79_00200	COG0656	L-ascorbic acid biosynthetic process
MMY79_00205	COG0583	DNA-binding transcription factor activity
MMY79_00220	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MMY79_00225	COG1064	alcohol dehydrogenase
MMY79_00230	COG2818	Glycosylase
MMY79_00245	COG1194	a g-specific adenine glycosylase
MMY79_00260	COG5487	UPF0391 membrane protein
MMY79_00265	COG2983	Belongs to the UPF0260 family
MMY79_00270	COG2133	pyrroloquinoline quinone binding
MMY79_00275	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MMY79_00280	COG2116	formate transmembrane transporter activity
MMY79_00300	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MMY79_00305	COG1335	isochorismatase
MMY79_00310	COG0385	Bile acid
MMY79_00315	COG1683	Conserved Protein
MMY79_00330	COG0346	lactoylglutathione lyase activity
MMY79_00335	COG0625	glutathione transferase activity
MMY79_00345	COG1113	amino acid transport
MMY79_00355	COG0523	cobalamin synthesis protein
MMY79_00365	COG2188	Transcriptional regulator
MMY79_00395	COG0010	Belongs to the arginase family
MMY79_00400	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MMY79_00415	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MMY79_00425	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
MMY79_00430	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
MMY79_00495	COG1910	domain protein
MMY79_00525	COG0534	Mate efflux family protein
MMY79_00530	COG0436	Aminotransferase
MMY79_00535	COG2733	membrane
MMY79_00550	COG2918	glutathione biosynthetic process
MMY79_00565	COG3150	esterase
MMY79_00575	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
MMY79_00585	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MMY79_00595	COG2233	PERMEase
MMY79_00600	COG2351	hydroxyisourate hydrolase activity
MMY79_00635	COG3706	GGDEF domain
MMY79_00655	COG0708	Exodeoxyribonuclease III
MMY79_00680	COG0189	ligase activity
MMY79_00700	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
MMY79_00725	COG4942	peptidase
MMY79_00735	COG0508	dehydrogenase complex catalyzes the overall conversion of
MMY79_00745	COG2119	membrane
MMY79_00750	COG4774	siderophore transport
MMY79_00755	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MMY79_00755	COG0426	domain, Protein
MMY79_00775	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MMY79_00795	COG1902	pentaerythritol trinitrate reductase activity
MMY79_00800	COG1519	Transferase
MMY79_00805	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MMY79_00810	COG0668	transmembrane transport
MMY79_00820	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MMY79_00825	COG1335	isochorismatase
MMY79_00830	COG1522	sequence-specific DNA binding
MMY79_00855	COG2205	protein histidine kinase activity
MMY79_00855	COG2198	Histidine kinase
MMY79_00855	COG0784	Response regulator, receiver
MMY79_00860	COG3162	membrane
MMY79_00865	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MMY79_00875	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MMY79_00895	COG1309	transcriptional regulator
MMY79_00915	COG4221	oxidoreductase activity
MMY79_00920	COG0789	Transcriptional regulator
MMY79_00925	COG0351	phosphomethylpyrimidine kinase
MMY79_00925	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MMY79_00925	COG0352	thiamine-phosphate diphosphorylase activity
MMY79_00935	COG2814	Major facilitator Superfamily
MMY79_00940	COG0629	single-stranded DNA binding
MMY79_00950	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
MMY79_00960	COG1113	amino acid transport
MMY79_00970	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MMY79_00975	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_00985	COG1335	isochorismatase
MMY79_01030	COG2814	Major facilitator Superfamily
MMY79_01035	COG0583	DNA-binding transcription factor activity
MMY79_01055	COG0667	Aldo Keto reductase
MMY79_01090	COG1733	regulation of RNA biosynthetic process
MMY79_01095	COG2249	NAD(P)H dehydrogenase (quinone) activity
MMY79_01195	COG0582	viral genome integration into host DNA
MMY79_01250	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
MMY79_01265	COG2329	Antibiotic biosynthesis monooxygenase
MMY79_01295	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MMY79_01325	COG0427	acetyl-CoA hydrolase
MMY79_01350	COG0659	secondary active sulfate transmembrane transporter activity
MMY79_01355	COG4221	oxidoreductase activity
MMY79_01360	COG2873	o-acetylhomoserine
MMY79_01365	COG0488	(ABC) transporter
MMY79_01430	COG0833	amino acid
MMY79_01485	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
MMY79_01490	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MMY79_01505	COG2226	methyltransferase
MMY79_01555	COG0070	glutamate synthase
MMY79_01555	COG0067	glutamate synthase
MMY79_01555	COG0069	glutamate synthase activity
MMY79_01560	COG0493	'glutamate synthase
MMY79_01570	COG1704	LemA family
MMY79_01575	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
MMY79_01595	COG3307	-O-antigen
MMY79_01615	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MMY79_01630	COG0194	GDP metabolic process
MMY79_01645	COG4969	Belongs to the N-Me-Phe pilin family
MMY79_01685	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MMY79_01705	COG5380	lipid catabolic process
MMY79_01710	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MMY79_01725	COG5006	permease, DMT superfamily
MMY79_01735	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MMY79_01740	COG0277	FAD linked oxidase domain protein
MMY79_01755	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
MMY79_01760	COG2249	NAD(P)H dehydrogenase (quinone) activity
MMY79_01775	COG1289	transmembrane transporter activity
MMY79_01785	COG0628	permease
MMY79_01790	COG1192	Involved in chromosome partitioning
MMY79_01820	COG0833	amino acid
MMY79_01825	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MMY79_01830	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MMY79_01840	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_01880	COG0583	DNA-binding transcription factor activity
MMY79_01885	COG1794	racemase activity, acting on amino acids and derivatives
MMY79_01890	COG0583	DNA-binding transcription factor activity
MMY79_01910	COG0751	glycine-tRNA ligase activity
MMY79_01915	COG0752	glycyl-tRNA synthetase alpha subunit
MMY79_01945	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
MMY79_01945	COG0617	tRNA 3'-terminal CCA addition
MMY79_01945	COG0517	IMP dehydrogenase activity
MMY79_01950	COG1983	PspC domain protein
MMY79_01960	COG1960	acyl-CoA dehydrogenase activity
MMY79_01975	COG0408	coproporphyrinogen oxidase activity
MMY79_01995	COG0513	Belongs to the DEAD box helicase family
MMY79_02005	COG1127	ABC transporter
MMY79_02010	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
MMY79_02020	COG2854	intermembrane phospholipid transfer
MMY79_02030	COG0598	Magnesium transport protein CorA
MMY79_02040	COG0494	nUDIX hydrolase
MMY79_02045	COG1040	competence protein
MMY79_02050	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
MMY79_02070	COG1946	Acyl-CoA thioesterase
MMY79_02075	COG1301	dicarboxylic acid transport
MMY79_02090	COG1959	2 iron, 2 sulfur cluster binding
MMY79_02095	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MMY79_02095	COG1017	nitric oxide dioxygenase activity
MMY79_02105	COG0433	COG0433 Predicted ATPase
MMY79_02125	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MMY79_02130	COG0088	Forms part of the polypeptide exit tunnel
MMY79_02150	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
MMY79_02265	COG1960	acyl-CoA dehydrogenase activity
MMY79_02270	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
MMY79_02300	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
MMY79_02305	COG0339	signal peptide processing
MMY79_02310	COG0557	exoribonuclease II activity
MMY79_02355	COG0179	Fumarylacetoacetate (FAA) hydrolase
MMY79_02360	COG1295	ribonuclease BN
MMY79_02395	COG1702	phosphate starvation-inducible protein PhoH
MMY79_02405	COG0739	heme binding
MMY79_02405	COG0741	lytic transglycosylase activity
MMY79_02405	COG1196	nuclear chromosome segregation
MMY79_02435	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
MMY79_02440	COG1183	phosphatidylcholine synthase activity
MMY79_02490	COG1960	acyl-CoA dehydrogenase activity
MMY79_02495	COG1309	transcriptional regulator
MMY79_02510	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MMY79_02515	COG1960	acyl-CoA dehydrogenase activity
MMY79_02520	COG1024	Enoyl-CoA hydratase
MMY79_02555	COG2969	positive regulation of protein catabolic process
MMY79_02560	COG0625	glutathione transferase activity
MMY79_02565	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
MMY79_02570	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
MMY79_02575	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
MMY79_02580	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
MMY79_02585	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
MMY79_02605	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MMY79_02615	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MMY79_02620	COG1408	metallophosphoesterase
MMY79_02625	COG2885	chlorophyll binding
MMY79_02630	COG2199	diguanylate cyclase activity
MMY79_02670	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MMY79_02695	COG1607	acyl-coa hydrolase
MMY79_02730	COG2350	Protein conserved in bacteria
MMY79_02740	COG0613	PHP domain protein
MMY79_02745	COG3781	membrane
MMY79_02755	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MMY79_02770	COG1862	Preprotein translocase
MMY79_02800	COG0582	viral genome integration into host DNA
MMY79_02885	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
MMY79_02905	COG0726	polysaccharide deacetylase
MMY79_02910	COG0463	Glycosyl transferase, family 2
MMY79_02915	COG0438	transferase activity, transferring glycosyl groups
MMY79_02945	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
MMY79_02980	COG1960	acyl-CoA dehydrogenase activity
MMY79_02985	COG1960	acyl-CoA dehydrogenase activity
MMY79_02995	COG2205	protein histidine kinase activity
MMY79_03000	COG0745	RESPONSE REGULATOR receiver
MMY79_03010	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
MMY79_03030	COG2096	Adenosyltransferase
MMY79_03085	COG0285	dihydrofolate synthase activity
MMY79_03105	COG0450	alkyl hydroperoxide reductase
MMY79_03120	COG0477	Major facilitator Superfamily
MMY79_03125	COG1272	protein, Hemolysin III
MMY79_03135	COG2153	protein acetylation
MMY79_03155	COG0183	Belongs to the thiolase family
MMY79_03160	COG2207	Transcriptional regulator
MMY79_03180	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MMY79_03195	COG0183	Belongs to the thiolase family
MMY79_03205	COG2885	chlorophyll binding
MMY79_03205	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
MMY79_03215	COG1690	Belongs to the RtcB family
MMY79_03220	COG0833	amino acid
MMY79_03230	COG2233	PERMEase
MMY79_03235	COG1217	gtp-binding protein TYPA
MMY79_03250	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MMY79_03260	COG2094	Belongs to the DNA glycosylase MPG family
MMY79_03265	COG4772	TonB-dependent receptor
MMY79_03270	COG1902	pentaerythritol trinitrate reductase activity
MMY79_03285	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MMY79_03290	COG0354	folic acid binding
MMY79_03300	COG3189	MarR family transcriptional regulator
MMY79_03305	COG2824	Alkylphosphonate utilization operon protein PhnA
MMY79_03310	COG3422	double-strand break repair
MMY79_03350	COG0840	transmembrane signaling receptor activity
MMY79_03380	COG2832	Protein of unknown function (DUF454)
MMY79_03385	COG1376	ErfK ybiS ycfS ynhG family protein
MMY79_03425	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MMY79_03435	COG1289	transmembrane transporter activity
MMY79_03440	COG2814	Major facilitator Superfamily
MMY79_03460	COG1115	amino acid carrier protein
MMY79_03465	COG1752	Esterase of the alpha-beta hydrolase superfamily
MMY79_03470	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MMY79_03475	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
MMY79_03510	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MMY79_03520	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MMY79_03525	COG1077	Cell shape determining protein MreB Mrl
MMY79_03530	COG1792	Involved in formation and maintenance of cell shape
MMY79_03535	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
MMY79_03540	COG0424	maF-like protein
MMY79_03545	COG1530	ribonuclease E activity
MMY79_03555	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MMY79_03575	COG2249	NAD(P)H dehydrogenase (quinone) activity
MMY79_03600	COG2207	Transcriptional regulator
MMY79_03655	COG1113	amino acid transport
MMY79_03665	COG0142	geranyltranstransferase activity
MMY79_03670	COG2315	Protein conserved in bacteria
MMY79_03685	COG1752	Esterase of the alpha-beta hydrolase superfamily
MMY79_03710	COG2194	sulfuric ester hydrolase activity
MMY79_03715	COG0745	RESPONSE REGULATOR receiver
MMY79_03720	COG0642	Histidine kinase
MMY79_03735	COG0004	ammonium transporteR
MMY79_03740	COG0583	DNA-binding transcription factor activity
MMY79_03755	COG0583	DNA-binding transcription factor activity
MMY79_03765	COG0525	valine-tRNA ligase activity
MMY79_03775	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_03785	COG0393	Putative heavy-metal-binding
MMY79_03790	COG0393	Putative heavy-metal-binding
MMY79_03795	COG1538	Outer membrane efflux protein
MMY79_03805	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MMY79_03810	COG0671	phosphoesterase, PA-phosphatase related
MMY79_03835	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
MMY79_03850	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MMY79_03850	COG1648	precorrin-2 dehydrogenase activity
MMY79_03855	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
MMY79_03890	COG0531	amino acid
MMY79_03905	COG0321	lipoyl(octanoyl) transferase activity
MMY79_03910	COG2921	Belongs to the UPF0250 family
MMY79_03945	COG2009	succinate dehydrogenase
MMY79_03950	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
MMY79_03955	COG1053	succinate dehydrogenase
MMY79_03960	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MMY79_03985	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MMY79_04005	COG2354	Protein conserved in bacteria
MMY79_04010	COG2321	neutral zinc metallopeptidase
MMY79_04035	COG2843	Capsule synthesis protein
MMY79_04050	COG0589	response to stress
MMY79_04070	COG0505	Belongs to the CarA family
MMY79_04100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MMY79_04105	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
MMY79_04155	COG0477	Major facilitator Superfamily
MMY79_04160	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
MMY79_04175	COG1597	lipid kinase activity
MMY79_04180	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
MMY79_04205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MMY79_04230	COG0741	lytic transglycosylase activity
MMY79_04250	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
MMY79_04260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MMY79_04285	COG0778	Nitroreductase
MMY79_04300	COG1929	Belongs to the glycerate kinase type-1 family
MMY79_04310	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
MMY79_04315	COG3339	Conserved Protein
MMY79_04340	COG1113	amino acid transport
MMY79_04350	COG0019	diaminopimelate decarboxylase activity
MMY79_04365	COG2267	carboxylic ester hydrolase activity
MMY79_04370	COG1280	lysine exporter protein (LysE YggA)
MMY79_04375	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
MMY79_04405	COG0463	Glycosyl transferase, family 2
MMY79_04425	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MMY79_04450	COG0697	spore germination
MMY79_04460	COG4591	ABC-type transport system involved in lipoprotein release permease component
MMY79_04465	COG1136	(ABC) transporter
MMY79_04470	COG0658	competence protein
MMY79_04470	COG2333	competence protein COMEC
MMY79_04480	COG0616	signal peptide processing
MMY79_04480	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
MMY79_04490	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
MMY79_04500	COG0628	permease
MMY79_04535	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MMY79_04555	COG0823	Involved in the tonB-independent uptake of proteins
MMY79_04575	COG0824	Thioesterase
MMY79_04580	COG1473	amidohydrolase
MMY79_04600	COG0047	phosphoribosylformylglycinamidine synthase activity
MMY79_04600	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MMY79_04605	COG2814	Major facilitator Superfamily
MMY79_04610	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
MMY79_04615	COG1024	Enoyl-CoA hydratase
MMY79_04620	COG1051	belongs to the nudix hydrolase family
MMY79_04620	COG1056	cytidyltransferase-related domain
MMY79_04635	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
MMY79_04650	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
MMY79_04655	COG0602	queuosine metabolic process
MMY79_04665	COG4625	pathogenesis
MMY79_04670	COG0583	DNA-binding transcription factor activity
MMY79_04675	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
MMY79_04680	COG4208	sulfate ABC transporter
MMY79_04685	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
MMY79_04695	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
MMY79_04700	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MMY79_04705	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
MMY79_04725	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MMY79_04735	COG0481	GTPase activity
MMY79_04740	COG0681	Belongs to the peptidase S26 family
MMY79_04750	COG0571	ribonuclease III activity
MMY79_04755	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MMY79_04770	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
MMY79_04780	COG4221	oxidoreductase activity
MMY79_04810	COG0436	Aminotransferase
MMY79_04830	COG0556	nucleotide-excision repair
MMY79_04885	COG2070	2-Nitropropane dioxygenase
MMY79_04900	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MMY79_04915	COG1215	transferase activity, transferring glycosyl groups
MMY79_04930	COG0415	Belongs to the DNA photolyase family
MMY79_04940	COG1252	NADH dehydrogenase
MMY79_04945	COG1686	Belongs to the peptidase S11 family
MMY79_04965	COG1187	pseudouridine synthase activity
MMY79_04980	COG0477	Major facilitator Superfamily
MMY79_04985	COG0583	DNA-binding transcription factor activity
MMY79_04990	COG1823	symporter activity
MMY79_05000	COG0612	Peptidase, M16
MMY79_05025	COG0352	thiamine-phosphate diphosphorylase activity
MMY79_05060	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MMY79_05085	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MMY79_05090	COG0076	glutamate decarboxylase activity
MMY79_05095	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_05100	COG1522	sequence-specific DNA binding
MMY79_05105	COG3961	Belongs to the TPP enzyme family
MMY79_05110	COG1113	amino acid transport
MMY79_05115	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
MMY79_05120	COG0573	inorganic phosphate transmembrane transporter activity
MMY79_05130	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MMY79_05135	COG0616	signal peptide processing
MMY79_05175	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
MMY79_05180	COG1686	Belongs to the peptidase S11 family
MMY79_05205	COG0583	DNA-binding transcription factor activity
MMY79_05210	COG1067	ATP-dependent peptidase activity
MMY79_05230	COG0254	rRNA binding
MMY79_05250	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MMY79_05255	COG1966	Carbon starvation protein
MMY79_05260	COG2879	small protein
MMY79_05285	COG0583	DNA-binding transcription factor activity
MMY79_05290	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MMY79_05300	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_05310	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MMY79_05315	COG0723	plastoquinol--plastocyanin reductase activity
MMY79_05315	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MMY79_05360	COG0431	NADPH-dependent FMN reductase
MMY79_05365	COG0798	PFAM Bile acid sodium symporter
MMY79_05375	COG0640	Transcriptional regulator
MMY79_05405	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
MMY79_05420	COG2964	Protein conserved in bacteria
MMY79_05430	COG1741	Belongs to the pirin family
MMY79_05445	COG3739	integral membrane protein
MMY79_05465	COG0302	gtp cyclohydrolase
MMY79_05485	COG0512	Glutamine amidotransferase of anthranilate synthase
MMY79_05500	COG0174	glutamine synthetase
MMY79_05510	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
MMY79_05545	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
MMY79_05550	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
MMY79_05555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MMY79_05565	COG0281	malic enzyme
MMY79_05565	COG0280	phosphate acetyltransferase
MMY79_05575	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MMY79_05580	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
MMY79_05585	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
MMY79_05605	COG1960	acyl-CoA dehydrogenase activity
MMY79_05610	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MMY79_05615	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MMY79_05625	COG2223	nitrite transmembrane transporter activity
MMY79_05635	COG0024	Methionine aminopeptidase
MMY79_05640	COG0052	Belongs to the universal ribosomal protein uS2 family
MMY79_05655	COG2207	Transcriptional regulator
MMY79_05680	COG2951	lytic endotransglycosylase activity
MMY79_05685	COG0772	Belongs to the SEDS family
MMY79_05700	COG0842	Transport permease protein
MMY79_05705	COG1131	(ABC) transporter
MMY79_05750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MMY79_05765	COG4215	(ABC) transporter
MMY79_05770	COG4160	amino acid transport
MMY79_05775	COG4598	ABC transporter
MMY79_05785	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
MMY79_05790	COG0826	peptidase U32
MMY79_05795	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MMY79_05800	COG0384	phenazine biosynthesis protein PhzF
MMY79_05810	COG1720	tRNA m6t6A37 methyltransferase activity
MMY79_05820	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
MMY79_05835	COG0642	Histidine kinase
MMY79_05845	COG0494	nUDIX hydrolase
MMY79_05855	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MMY79_05860	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MMY79_05865	COG3139	Protein of unknown function (DUF1315)
MMY79_05875	COG1301	dicarboxylic acid transport
MMY79_05880	COG1960	acyl-CoA dehydrogenase activity
MMY79_05890	COG2819	hydrolase of the alpha beta superfamily
MMY79_05900	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
MMY79_05910	COG2195	Cleaves the N-terminal amino acid of tripeptides
MMY79_05915	COG1234	tRNA 3'-trailer cleavage
MMY79_05940	COG2363	Small membrane protein
MMY79_05960	COG0513	Belongs to the DEAD box helicase family
MMY79_05970	COG0778	Nitroreductase
MMY79_06000	COG1286	toxin biosynthetic process
MMY79_06030	COG1610	YqeY-like protein
MMY79_06060	COG2815	serine threonine protein kinase
MMY79_06060	COG0515	serine threonine protein kinase
MMY79_06085	COG1278	Cold shock
MMY79_06100	COG3243	poly(R)-hydroxyalkanoic acid synthase
MMY79_06105	COG0786	glutamate:sodium symporter activity
MMY79_06110	COG0475	glutathione-regulated potassium exporter activity
MMY79_06110	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MMY79_06115	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_06185	COG2995	paraquat-inducible protein a
MMY79_06190	COG3008	intermembrane lipid transfer
MMY79_06190	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
MMY79_06200	COG1794	racemase activity, acting on amino acids and derivatives
MMY79_06210	COG2175	clavaminate synthase activity
MMY79_06215	COG3246	L-lysine catabolic process to acetate
MMY79_06220	COG2814	Major facilitator Superfamily
MMY79_06235	COG2855	membrane
MMY79_06270	COG2814	Major facilitator Superfamily
MMY79_06295	COG1301	dicarboxylic acid transport
MMY79_06310	COG2011	ABC-type metal ion transport system permease component
MMY79_06315	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MMY79_06320	COG1464	Belongs to the NlpA lipoprotein family
MMY79_06325	COG0151	Belongs to the GarS family
MMY79_06335	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
MMY79_06365	COG2308	Evidence 4 Homologs of previously reported genes of
MMY79_06375	COG1305	Transglutaminase-like
MMY79_06385	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MMY79_06390	COG0305	Participates in initiation and elongation during chromosome replication
MMY79_06415	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
MMY79_06425	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
MMY79_06430	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MMY79_06455	COG1649	PFAM Uncharacterised BCR, COG1649
MMY79_06455	COG0726	polysaccharide deacetylase
MMY79_06460	COG1215	transferase activity, transferring glycosyl groups
MMY79_06465	COG3658	cytochrome
MMY79_06475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MMY79_06495	COG2890	protein-(glutamine-N5) methyltransferase activity
MMY79_06500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_06505	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MMY79_06520	COG1960	acyl-CoA dehydrogenase activity
MMY79_06525	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MMY79_06540	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
MMY79_06550	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
MMY79_06555	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
MMY79_06565	COG2205	protein histidine kinase activity
MMY79_06570	COG0745	RESPONSE REGULATOR receiver
MMY79_06575	COG0174	glutamine synthetase
MMY79_06595	COG0729	surface antigen
MMY79_06605	COG2706	6-phosphogluconolactonase activity
MMY79_06625	COG0471	metal ion transport
MMY79_06635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MMY79_06640	COG2814	Major facilitator Superfamily
MMY79_06655	COG0583	DNA-binding transcription factor activity
MMY79_06670	COG1187	pseudouridine synthase activity
MMY79_06685	COG0564	pseudouridine synthase activity
MMY79_06690	COG0802	atpase or kinase
MMY79_06695	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
MMY79_06705	COG1923	regulation of RNA biosynthetic process
MMY79_06710	COG0697	spore germination
MMY79_06735	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MMY79_06745	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MMY79_06745	COG0519	Catalyzes the synthesis of GMP from XMP
MMY79_06750	COG4302	ethanolamine ammonia-lyase activity
MMY79_06755	COG4303	Ethanolamine ammonia lyase large subunit
MMY79_06760	COG0531	amino acid
MMY79_06780	COG1454	alcohol dehydrogenase
MMY79_06785	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MMY79_06795	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
MMY79_06815	COG0308	aminopeptidase N
MMY79_06865	COG2205	protein histidine kinase activity
MMY79_06890	COG4772	TonB-dependent receptor
MMY79_06895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MMY79_06905	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MMY79_06955	COG1733	regulation of RNA biosynthetic process
MMY79_06970	COG0583	DNA-binding transcription factor activity
MMY79_06985	COG3111	PFAM Bacterial OB fold (BOF) protein
MMY79_07005	COG0488	(ABC) transporter
MMY79_07010	COG0589	response to stress
MMY79_07030	COG3135	benzoate transporter
MMY79_07035	COG1522	sequence-specific DNA binding
MMY79_07045	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MMY79_07050	COG0583	DNA-binding transcription factor activity
MMY79_07060	COG0183	Belongs to the thiolase family
MMY79_07065	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_07070	COG2030	dehydratase
MMY79_07075	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MMY79_07115	COG0824	Thioesterase
MMY79_07120	COG1454	alcohol dehydrogenase
MMY79_07135	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MMY79_07165	COG0069	glutamate synthase activity
MMY79_07195	COG2814	Major facilitator Superfamily
MMY79_07210	COG0511	ligase activity, forming carbon-carbon bonds
MMY79_07235	COG4264	IucA IucC family
MMY79_07245	COG4264	IucA IucC family
MMY79_07250	COG2423	ornithine cyclodeaminase activity
MMY79_07255	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MMY79_07265	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MMY79_07265	COG1116	anion transmembrane transporter activity
MMY79_07280	COG2146	nitrite reductase [NAD(P)H] activity
MMY79_07280	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MMY79_07285	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MMY79_07290	COG0243	molybdopterin cofactor binding
MMY79_07300	COG0243	molybdopterin cofactor binding
MMY79_07320	COG0315	cyclic pyranopterin monophosphate synthase activity
MMY79_07320	COG0521	Mo-molybdopterin cofactor biosynthetic process
MMY79_07325	COG0303	'Molybdopterin
MMY79_07335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MMY79_07340	COG0697	spore germination
MMY79_07365	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MMY79_07385	COG1335	isochorismatase
MMY79_07425	COG2204	response regulator
MMY79_07430	COG3852	Histidine kinase
MMY79_07455	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MMY79_07460	COG0575	Belongs to the CDS family
MMY79_07475	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
MMY79_07495	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
MMY79_07510	COG2137	regulation of response to DNA damage stimulus
MMY79_07520	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
MMY79_07525	COG1011	Hydrolase
MMY79_07535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MMY79_07540	COG1522	sequence-specific DNA binding
MMY79_07550	COG1113	amino acid transport
MMY79_07555	COG0657	acetylesterase activity
MMY79_07570	COG0659	secondary active sulfate transmembrane transporter activity
MMY79_07590	COG3300	MHYT domain
MMY79_07590	COG5001	Diguanylate cyclase
MMY79_07605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MMY79_07605	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MMY79_07605	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
MMY79_07610	COG1105	Belongs to the carbohydrate kinase PfkB family
MMY79_07615	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MMY79_07615	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
MMY79_07645	COG0024	Methionine aminopeptidase
MMY79_07650	COG0583	DNA-binding transcription factor activity
MMY79_07665	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MMY79_07670	COG0516	GMP reductase activity
MMY79_07670	COG0517	IMP dehydrogenase activity
MMY79_07695	COG0552	protein localization to endoplasmic reticulum
MMY79_07720	COG4890	Cyd operon protein YbgT
MMY79_07725	COG1294	oxidase, subunit
MMY79_07740	COG1585	Membrane protein implicated in regulation of membrane protease activity
MMY79_07750	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MMY79_07765	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MMY79_07770	COG0569	domain protein
MMY79_07775	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MMY79_07805	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
MMY79_07810	COG0542	response to heat
MMY79_07820	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
MMY79_07835	COG0446	pyridine nucleotide-disulphide oxidoreductase
MMY79_07835	COG1902	pentaerythritol trinitrate reductase activity
MMY79_07875	COG0148	phosphopyruvate hydratase activity
MMY79_07880	COG2323	membrane
MMY79_07910	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
MMY79_07920	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MMY79_07925	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MMY79_07930	COG0183	Belongs to the thiolase family
MMY79_07935	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MMY79_07940	COG0596	Alpha beta hydrolase
MMY79_07945	COG2271	Major facilitator Superfamily
MMY79_07950	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MMY79_07955	COG3485	protocatechuate 3,4-dioxygenase
MMY79_07960	COG3485	protocatechuate 3,4-dioxygenase
MMY79_07965	COG0710	3-dehydroquinate dehydratase activity
MMY79_07970	COG3420	alginic acid biosynthetic process
MMY79_07975	COG3659	wide pore channel activity
MMY79_07980	COG4993	Dehydrogenase
MMY79_08005	COG1414	Transcriptional regulator
MMY79_08010	COG0583	DNA-binding transcription factor activity
MMY79_08015	COG1960	acyl-CoA dehydrogenase activity
MMY79_08040	COG2814	Major facilitator Superfamily
MMY79_08050	COG0154	amidase activity
MMY79_08080	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_08090	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MMY79_08100	COG3733	amine oxidase
MMY79_08110	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_08115	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MMY79_08120	COG0183	Belongs to the thiolase family
MMY79_08125	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MMY79_08130	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MMY79_08140	COG4829	muconolactone delta-isomerase
MMY79_08145	COG4948	Mandelate Racemase Muconate Lactonizing
MMY79_08150	COG0583	DNA-binding transcription factor activity
MMY79_08160	COG2186	Transcriptional regulator
MMY79_08180	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_08185	COG0583	DNA-binding transcription factor activity
MMY79_08190	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MMY79_08195	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MMY79_08220	COG1079	Belongs to the binding-protein-dependent transport system permease family
MMY79_08240	COG3829	transcription factor binding
MMY79_08250	COG3829	transcription factor binding
MMY79_08270	COG0640	Transcriptional regulator
MMY79_08275	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_08280	COG1414	Transcriptional regulator
MMY79_08285	COG1053	succinate dehydrogenase
MMY79_08300	COG3659	wide pore channel activity
MMY79_08305	COG1309	transcriptional regulator
MMY79_08325	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MMY79_08335	COG1053	succinate dehydrogenase
MMY79_08340	COG1053	succinate dehydrogenase
MMY79_08350	COG1846	Transcriptional regulator
MMY79_08355	COG1024	Enoyl-CoA hydratase
MMY79_08360	COG2814	Major facilitator Superfamily
MMY79_08380	COG0644	oxidoreductase
MMY79_08380	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
MMY79_08390	COG1960	acyl-CoA dehydrogenase activity
MMY79_08395	COG1960	acyl-CoA dehydrogenase activity
MMY79_08400	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_08405	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MMY79_08415	COG0318	PFAM AMP-dependent synthetase and ligase
MMY79_08425	COG3971	2-oxopent-4-enoate hydratase activity
MMY79_08430	COG4569	acetaldehyde dehydrogenase (acetylating) activity
MMY79_08450	COG0583	DNA-binding transcription factor activity
MMY79_08455	COG4638	Rieske (2fe-2S)
MMY79_08460	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
MMY79_08470	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_08475	COG3384	dioxygenase
MMY79_08480	COG0446	pyridine nucleotide-disulphide oxidoreductase
MMY79_08485	COG2814	Major facilitator Superfamily
MMY79_08490	COG2814	Major facilitator Superfamily
MMY79_08495	COG0583	DNA-binding transcription factor activity
MMY79_08515	COG0446	pyridine nucleotide-disulphide oxidoreductase
MMY79_08515	COG1902	pentaerythritol trinitrate reductase activity
MMY79_08525	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
MMY79_08560	COG1309	transcriptional regulator
MMY79_08570	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_08575	COG4689	acetoacetate decarboxylase
MMY79_08585	COG0446	pyridine nucleotide-disulphide oxidoreductase
MMY79_08585	COG1902	pentaerythritol trinitrate reductase activity
MMY79_08595	COG0656	L-ascorbic acid biosynthetic process
MMY79_08600	COG1073	alpha beta
MMY79_08615	COG2814	Major facilitator Superfamily
MMY79_08645	COG1309	transcriptional regulator
MMY79_08685	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
MMY79_08700	COG1335	isochorismatase
MMY79_08715	COG1073	alpha beta
MMY79_08720	COG0583	DNA-binding transcription factor activity
MMY79_08740	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
MMY79_08745	COG0243	molybdopterin cofactor binding
MMY79_08775	COG1262	PFAM Formylglycine-generating sulfatase enzyme
MMY79_08780	COG3119	arylsulfatase activity
MMY79_08800	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MMY79_08815	COG2271	Major facilitator Superfamily
MMY79_08825	COG1566	PFAM secretion protein HlyD family protein
MMY79_08840	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
MMY79_08845	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_08850	COG0129	dihydroxy-acid dehydratase activity
MMY79_08860	COG0583	DNA-binding transcription factor activity
MMY79_08865	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MMY79_08875	COG2084	Dehydrogenase
MMY79_08880	COG1278	Cold shock
MMY79_08885	COG2207	Transcriptional regulator
MMY79_08895	COG1064	alcohol dehydrogenase
MMY79_08910	COG4774	siderophore transport
MMY79_08935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MMY79_08940	COG1120	ATPase activity
MMY79_08960	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MMY79_08995	COG0582	viral genome integration into host DNA
MMY79_09170	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
MMY79_09175	COG4773	Receptor
MMY79_09190	COG1476	TRANSCRIPTIONal
MMY79_09235	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
MMY79_09285	COG1216	Glycosyl transferase, family 2
MMY79_09285	COG0463	Glycosyl transferase, family 2
MMY79_09290	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MMY79_09295	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
MMY79_09300	COG1181	Belongs to the D-alanine--D-alanine ligase family
MMY79_09320	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
MMY79_09330	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MMY79_09340	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MMY79_09350	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
MMY79_09350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MMY79_09385	COG2259	Doxx family
MMY79_09390	COG0583	DNA-binding transcription factor activity
MMY79_09395	COG2205	protein histidine kinase activity
MMY79_09400	COG0745	RESPONSE REGULATOR receiver
MMY79_09405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MMY79_09410	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MMY79_09430	COG4628	conserved protein (DUF2132)
MMY79_09465	COG3971	2-oxopent-4-enoate hydratase activity
MMY79_09470	COG4569	acetaldehyde dehydrogenase (acetylating) activity
MMY79_09475	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MMY79_09495	COG1309	transcriptional regulator
MMY79_09505	COG2175	clavaminate synthase activity
MMY79_09510	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MMY79_09525	COG0667	Aldo Keto reductase
MMY79_09530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MMY79_09545	COG2175	clavaminate synthase activity
MMY79_09575	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_09580	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MMY79_09615	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MMY79_09620	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MMY79_09625	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_09630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_09645	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
MMY79_09660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MMY79_09680	COG1132	(ABC) transporter
MMY79_09685	COG1132	(ABC) transporter
MMY79_09705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MMY79_09710	COG0601	transmembrane transport
MMY79_09740	COG3539	Fimbrial protein
MMY79_09765	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
MMY79_09775	COG0753	catalase activity
MMY79_09780	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MMY79_09845	COG4771	TonB-dependent receptor
MMY79_09850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MMY79_09855	COG1535	isochorismatase
MMY79_09855	COG3433	isochorismatase activity
MMY79_09865	COG1021	2,3-dihydroxybenzoate-AMP ligase
MMY79_09870	COG1169	isochorismate synthase
MMY79_09875	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_09885	COG3251	PFAM MbtH domain protein
MMY79_09915	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
MMY79_09920	COG4149	molybdate abc transporter
MMY79_09925	COG0725	ABC transporter, periplasmic molybdate-binding protein
MMY79_09935	COG4638	Rieske (2fe-2S)
MMY79_09940	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
MMY79_09945	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MMY79_09945	COG0543	2 iron, 2 sulfur cluster binding
MMY79_09970	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_09990	COG2207	Transcriptional regulator
MMY79_09995	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_10000	COG2610	gluconate transmembrane transporter activity
MMY79_10040	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
MMY79_10065	COG0583	DNA-binding transcription factor activity
MMY79_10075	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MMY79_10080	COG2031	fatty acid transporter
MMY79_10085	COG0183	Belongs to the thiolase family
MMY79_10090	COG0583	DNA-binding transcription factor activity
MMY79_10095	COG0583	DNA-binding transcription factor activity
MMY79_10110	COG1027	Aspartate ammonia-lyase
MMY79_10120	COG0477	Major facilitator Superfamily
MMY79_10140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_10145	COG4521	taurine ABC transporter
MMY79_10160	COG2188	Transcriptional regulator
MMY79_10170	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
MMY79_10175	COG1733	regulation of RNA biosynthetic process
MMY79_10180	COG2207	Transcriptional regulator
MMY79_10180	COG3708	Transcriptional regulator
MMY79_10195	COG0730	response to heat
MMY79_10210	COG3453	Protein conserved in bacteria
MMY79_10210	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MMY79_10220	COG3781	membrane
MMY79_10225	COG1063	alcohol dehydrogenase
MMY79_10235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MMY79_10240	COG0508	dehydrogenase complex catalyzes the overall conversion of
MMY79_10245	COG0022	dehydrogenase e1 component
MMY79_10250	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MMY79_10255	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MMY79_10270	COG3706	GGDEF domain
MMY79_10290	COG0133	tryptophan synthase activity
MMY79_10300	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MMY79_10335	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MMY79_10400	COG0842	Transport permease protein
MMY79_10405	COG0842	Transport permease protein
MMY79_10410	COG1131	(ABC) transporter
MMY79_10425	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
MMY79_10430	COG4773	Receptor
MMY79_10450	COG0730	response to heat
MMY79_10455	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
MMY79_10465	COG4772	TonB-dependent receptor
MMY79_10480	COG0406	alpha-ribazole phosphatase activity
MMY79_10485	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
MMY79_10505	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MMY79_10520	COG1960	acyl-CoA dehydrogenase activity
MMY79_10525	COG1960	acyl-CoA dehydrogenase activity
MMY79_10530	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MMY79_10535	COG2207	Transcriptional regulator
MMY79_10540	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MMY79_10545	COG0776	regulation of translation
MMY79_10570	COG0822	iron-sulfur transferase activity
MMY79_10575	COG0316	Belongs to the HesB IscA family
MMY79_10605	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MMY79_10625	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
MMY79_10630	COG0702	epimerase
MMY79_10675	COG0339	signal peptide processing
MMY79_10680	COG4166	transmembrane transport
MMY79_10695	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
MMY79_10715	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
MMY79_10720	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
MMY79_10735	COG2431	L-lysine efflux transmembrane transporter activity
MMY79_10750	COG0776	regulation of translation
MMY79_10815	COG0084	hydrolase, TatD family'
MMY79_10835	COG1663	tetraacyldisaccharide 4'-kinase activity
MMY79_10840	COG1132	(ABC) transporter
MMY79_10850	COG0811	peptide transport
MMY79_10855	COG1475	DNA binding
MMY79_10860	COG1192	Involved in chromosome partitioning
MMY79_10870	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
MMY79_10875	COG3178	'Phosphotransferase
MMY79_10885	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MMY79_10890	COG0191	fructose-bisphosphate aldolase activity
MMY79_10910	COG0424	maF-like protein
MMY79_10915	COG2850	peptidyl-arginine hydroxylation
MMY79_10925	COG0640	Transcriptional regulator
MMY79_10935	COG3619	membrane
MMY79_10940	COG3122	Protein conserved in bacteria
MMY79_10945	COG1132	(ABC) transporter
MMY79_10965	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
MMY79_10970	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MMY79_10980	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
MMY79_10980	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
MMY79_10980	COG0506	proline dehydrogenase activity
MMY79_10985	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MMY79_11000	COG3698	Phosphodiester glycosidase
MMY79_11010	COG2353	YceI-like domain
MMY79_11020	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
MMY79_11065	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MMY79_11065	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
MMY79_11090	COG3539	Fimbrial protein
MMY79_11125	COG0583	DNA-binding transcription factor activity
MMY79_11130	COG0697	spore germination
MMY79_11140	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
MMY79_11150	COG0583	DNA-binding transcription factor activity
MMY79_11165	COG2197	response regulator
MMY79_11175	COG1309	transcriptional regulator
MMY79_11190	COG1522	sequence-specific DNA binding
MMY79_11200	COG1126	abc transporter atp-binding protein
MMY79_11205	COG0765	amino acid transport
MMY79_11210	COG0765	amino acid transport
MMY79_11240	COG1464	Belongs to the NlpA lipoprotein family
MMY79_11245	COG1464	Belongs to the NlpA lipoprotein family
MMY79_11250	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MMY79_11255	COG2011	ABC-type metal ion transport system permease component
MMY79_11260	COG0012	GTP binding
MMY79_11285	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
MMY79_11310	COG0436	Aminotransferase
MMY79_11325	COG1917	Cupin 2, conserved barrel domain protein
MMY79_11325	COG2207	Transcriptional regulator
MMY79_11330	COG0386	Belongs to the glutathione peroxidase family
MMY79_11340	COG0436	Aminotransferase
MMY79_11345	COG1301	dicarboxylic acid transport
MMY79_11380	COG3634	alkyl hydroperoxide reductase activity
MMY79_11395	COG0583	DNA-binding transcription factor activity
MMY79_11400	COG0798	PFAM Bile acid sodium symporter
MMY79_11405	COG0640	Transcriptional regulator
MMY79_11420	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
MMY79_11440	COG1953	Uracil, thiamine, allantoin
MMY79_11450	COG2175	clavaminate synthase activity
MMY79_11455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_11460	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
MMY79_11465	COG4521	taurine ABC transporter
MMY79_11475	COG0477	Major facilitator Superfamily
MMY79_11495	COG1271	oxidase subunit
MMY79_11500	COG1294	oxidase, subunit
MMY79_11510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MMY79_11530	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
MMY79_11550	COG3052	prosthetic group binding
MMY79_11555	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
MMY79_11565	COG0583	DNA-binding transcription factor activity
MMY79_11570	COG1280	lysine exporter protein (LysE YggA)
MMY79_11575	COG1917	Cupin 2, conserved barrel domain protein
MMY79_11575	COG2207	Transcriptional regulator
MMY79_11580	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_11590	COG2814	Major facilitator Superfamily
MMY79_11595	COG0300	oxidoreductase activity
MMY79_11620	COG1346	cytolysis
MMY79_11630	COG0583	DNA-binding transcription factor activity
MMY79_11635	COG0625	glutathione transferase activity
MMY79_11640	COG0625	glutathione transferase activity
MMY79_11660	COG0583	DNA-binding transcription factor activity
MMY79_11670	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MMY79_11675	COG1045	serine acetyltransferase
MMY79_11680	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MMY79_11685	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MMY79_11695	COG1280	lysine exporter protein (LysE YggA)
MMY79_11715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MMY79_11720	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MMY79_11730	COG0765	amino acid transport
MMY79_11735	COG0765	amino acid transport
MMY79_11775	COG2205	protein histidine kinase activity
MMY79_11775	COG0784	Response regulator, receiver
MMY79_11795	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
MMY79_11845	COG0583	DNA-binding transcription factor activity
MMY79_11855	COG2814	Major facilitator Superfamily
MMY79_11870	COG0318	PFAM AMP-dependent synthetase and ligase
MMY79_11875	COG1309	transcriptional regulator
MMY79_11880	COG1960	acyl-CoA dehydrogenase activity
MMY79_11885	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MMY79_11890	COG1024	Enoyl-CoA hydratase
MMY79_11895	COG4770	biotin carboxylase activity
MMY79_11905	COG0583	DNA-binding transcription factor activity
MMY79_11920	COG1960	acyl-CoA dehydrogenase activity
MMY79_11930	COG2814	Major facilitator Superfamily
MMY79_11940	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MMY79_11945	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MMY79_11950	COG2814	Major facilitator Superfamily
MMY79_11955	COG1960	acyl-CoA dehydrogenase activity
MMY79_11960	COG1024	Enoyl-CoA hydratase
MMY79_11965	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_11970	COG1250	3-hydroxyacyl-CoA dehydrogenase
MMY79_11975	COG0183	Belongs to the thiolase family
MMY79_11985	COG2814	Major facilitator Superfamily
MMY79_11995	COG1024	Enoyl-CoA hydratase
MMY79_12005	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MMY79_12010	COG1960	acyl-CoA dehydrogenase activity
MMY79_12015	COG2814	Major facilitator Superfamily
MMY79_12020	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MMY79_12025	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
MMY79_12040	COG3842	ATPase activity
MMY79_12045	COG1840	ABC-type Fe3 transport system, periplasmic component
MMY79_12055	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MMY79_12060	COG1414	Transcriptional regulator
MMY79_12070	COG0583	DNA-binding transcription factor activity
MMY79_12100	COG1760	l-serine dehydratase
MMY79_12105	COG0531	amino acid
MMY79_12110	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_12135	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MMY79_12155	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MMY79_12170	COG0789	Transcriptional regulator
MMY79_12180	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MMY79_12185	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MMY79_12200	COG2807	transmembrane transport
MMY79_12205	COG0590	tRNA wobble adenosine to inosine editing
MMY79_12210	COG0666	response to abiotic stimulus
MMY79_12260	COG2885	chlorophyll binding
MMY79_12370	COG0477	Major facilitator Superfamily
MMY79_12385	COG1116	anion transmembrane transporter activity
MMY79_12390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MMY79_12400	COG0864	Transcriptional regulator
MMY79_12410	COG1733	regulation of RNA biosynthetic process
MMY79_12415	COG2249	NAD(P)H dehydrogenase (quinone) activity
MMY79_12420	COG0439	Biotin carboxylase
MMY79_12455	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
MMY79_12465	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_12470	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MMY79_12475	COG2271	Major facilitator Superfamily
MMY79_12485	COG2186	Transcriptional regulator
MMY79_12520	COG4770	biotin carboxylase activity
MMY79_12540	COG1914	H( )-stimulated, divalent metal cation uptake system
MMY79_12550	COG0300	oxidoreductase activity
MMY79_12595	COG1309	transcriptional regulator
MMY79_12605	COG1234	tRNA 3'-trailer cleavage
MMY79_12610	COG1051	belongs to the nudix hydrolase family
MMY79_12615	COG2814	Major facilitator Superfamily
MMY79_12625	COG0583	DNA-binding transcription factor activity
MMY79_12630	COG1309	transcriptional regulator
MMY79_12645	COG0657	acetylesterase activity
MMY79_12660	COG1595	DNA-templated transcription, initiation
MMY79_12665	COG3712	iron ion homeostasis
MMY79_12685	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MMY79_12690	COG4774	siderophore transport
MMY79_12710	COG4521	taurine ABC transporter
MMY79_12715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_12720	COG1116	anion transmembrane transporter activity
MMY79_12725	COG2515	1-aminocyclopropane-1-carboxylate deaminase
MMY79_12760	COG1522	sequence-specific DNA binding
MMY79_12765	COG1309	transcriptional regulator
MMY79_12825	COG2050	protein possibly involved in aromatic compounds catabolism
MMY79_12835	COG3327	negative regulation of DNA-templated transcription, initiation
MMY79_12840	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
MMY79_12845	COG0183	Belongs to the thiolase family
MMY79_12850	COG1250	3-hydroxyacyl-CoA dehydrogenase
MMY79_12855	COG1024	Enoyl-CoA hydratase
MMY79_12860	COG1024	Enoyl-CoA hydratase
MMY79_12865	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MMY79_12870	COG2151	metal-sulfur cluster biosynthetic enzyme
MMY79_12875	COG3396	Phenylacetate-CoA oxygenase
MMY79_12880	COG3460	Phenylacetate-CoA oxygenase
MMY79_12885	COG3396	Phenylacetate-CoA oxygenase
MMY79_12890	COG2030	dehydratase
MMY79_12890	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_12915	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
MMY79_12925	COG4122	O-methyltransferase activity
MMY79_12960	COG1137	ATPase activity
MMY79_12965	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
MMY79_12975	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
MMY79_13015	COG2814	Major facilitator Superfamily
MMY79_13040	COG0668	transmembrane transport
MMY79_13095	COG2226	methyltransferase
MMY79_13120	COG1278	Cold shock
MMY79_13125	COG1560	Kdo2-lipid A biosynthetic process
MMY79_13130	COG1280	lysine exporter protein (LysE YggA)
MMY79_13165	COG1570	exodeoxyribonuclease VII activity
MMY79_13250	COG2871	sodium ion transport
MMY79_13260	COG0583	DNA-binding transcription factor activity
MMY79_13270	COG4638	Rieske (2fe-2S)
MMY79_13280	COG0633	Ferredoxin
MMY79_13280	COG0543	2 iron, 2 sulfur cluster binding
MMY79_13285	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_13290	COG3135	benzoate transporter
MMY79_13295	COG2814	Major facilitator Superfamily
MMY79_13310	COG1643	Atp-dependent helicase
MMY79_13315	COG0450	alkyl hydroperoxide reductase
MMY79_13325	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MMY79_13345	COG3634	alkyl hydroperoxide reductase activity
MMY79_13365	COG0220	tRNA (guanine-N7-)-methyltransferase activity
MMY79_13385	COG0625	glutathione transferase activity
MMY79_13395	COG2885	chlorophyll binding
MMY79_13425	COG1546	Belongs to the CinA family
MMY79_13425	COG1058	Belongs to the CinA family
MMY79_13430	COG0542	response to heat
MMY79_13450	COG1765	OsmC-like protein
MMY79_13465	COG0667	Aldo Keto reductase
MMY79_13480	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
MMY79_13490	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
MMY79_13500	COG0527	aspartate kinase activity
MMY79_13510	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MMY79_13520	COG3038	cytochrome b561
MMY79_13525	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
MMY79_13530	COG2252	PERMEase
MMY79_13540	COG1741	Belongs to the pirin family
MMY79_13545	COG1309	transcriptional regulator
MMY79_13555	COG0300	oxidoreductase activity
MMY79_13560	COG2072	flavoprotein involved in K transport
MMY79_13565	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MMY79_13570	COG0583	DNA-binding transcription factor activity
MMY79_13585	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
MMY79_13615	COG1944	ATP diphosphatase activity
MMY79_13635	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MMY79_13650	COG2814	Major facilitator Superfamily
MMY79_13655	COG1024	Enoyl-CoA hydratase
MMY79_13660	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_13670	COG1960	acyl-CoA dehydrogenase activity
MMY79_13690	COG2186	Transcriptional regulator
MMY79_13695	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_13705	COG4948	Mandelate Racemase Muconate Lactonizing
MMY79_13710	COG2271	Major facilitator Superfamily
MMY79_13715	COG2721	sulfolactate sulfo-lyase activity
MMY79_13720	COG0697	spore germination
MMY79_13760	COG1113	amino acid transport
MMY79_13780	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_13800	COG0531	amino acid
MMY79_13810	COG1113	amino acid transport
MMY79_13835	COG1309	transcriptional regulator
MMY79_13840	COG4269	membrane
MMY79_13860	COG0438	transferase activity, transferring glycosyl groups
MMY79_13895	COG0210	DNA helicase
MMY79_14040	COG1902	pentaerythritol trinitrate reductase activity
MMY79_14040	COG0446	pyridine nucleotide-disulphide oxidoreductase
MMY79_14050	COG2203	Gaf domain
MMY79_14050	COG3706	GGDEF domain
MMY79_14050	COG4251	negative regulation of phosphorylation
MMY79_14050	COG5001	Diguanylate cyclase
MMY79_14060	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MMY79_14080	COG4172	Belongs to the ABC transporter superfamily
MMY79_14085	COG4239	(ABC) transporter, permease
MMY79_14090	COG4174	ABC transporter (Permease)
MMY79_14095	COG4166	transmembrane transport
MMY79_14100	COG0741	lytic transglycosylase activity
MMY79_14100	COG1388	LysM domain
MMY79_14100	COG0741	lytic transglycosylase activity
MMY79_14100	COG1388	LysM domain
MMY79_14140	COG0583	DNA-binding transcription factor activity
MMY79_14145	COG1279	arginine transmembrane transporter activity
MMY79_14155	COG0789	Transcriptional regulator
MMY79_14165	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MMY79_14170	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MMY79_14175	COG0006	proline dipeptidase activity
MMY79_14215	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MMY79_14230	COG3384	dioxygenase
MMY79_14240	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MMY79_14245	COG2878	Part of a membrane complex involved in electron transport
MMY79_14250	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MMY79_14275	COG0768	penicillin binding
MMY79_14280	COG0742	ribosomal rna small subunit methyltransferase
MMY79_14295	COG0830	nickel cation binding
MMY79_14305	COG0804	urea catabolic process
MMY79_14330	COG3015	lipoprotein NlpE involved in copper resistance
MMY79_14345	COG1253	flavin adenine dinucleotide binding
MMY79_14350	COG2851	Citrate transporter
MMY79_14400	COG1773	rubredoxin
MMY79_14405	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MMY79_14410	COG2267	carboxylic ester hydrolase activity
MMY79_14415	COG0583	DNA-binding transcription factor activity
MMY79_14445	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
MMY79_14450	COG4181	ATPase activity
MMY79_14495	COG1262	PFAM Formylglycine-generating sulfatase enzyme
MMY79_14515	COG0306	phosphate transporter
MMY79_14530	COG3958	Transketolase
MMY79_14535	COG3959	Transketolase, thiamine diphosphate binding domain
MMY79_14540	COG2271	Major facilitator Superfamily
MMY79_14545	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_14550	COG0583	DNA-binding transcription factor activity
MMY79_14565	COG2223	nitrite transmembrane transporter activity
MMY79_14575	COG2066	Belongs to the glutaminase family
MMY79_14580	COG0242	peptide deformylase activity
MMY79_14585	COG0477	Major facilitator Superfamily
MMY79_14595	COG0028	Belongs to the TPP enzyme family
MMY79_14610	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_14625	COG2271	Major facilitator Superfamily
MMY79_14660	COG1414	Transcriptional regulator
MMY79_14680	COG1024	Enoyl-CoA hydratase
MMY79_14690	COG1309	transcriptional regulator
MMY79_14700	COG1215	transferase activity, transferring glycosyl groups
MMY79_14705	COG0726	polysaccharide deacetylase
MMY79_14705	COG1649	PFAM Uncharacterised BCR, COG1649
MMY79_14715	COG4681	YaeQ
MMY79_14725	COG0523	cobalamin synthesis protein
MMY79_14735	COG1607	acyl-coa hydrolase
MMY79_14745	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MMY79_14750	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MMY79_14755	COG1309	transcriptional regulator
MMY79_14780	COG2040	homocysteine
MMY79_14785	COG0531	amino acid
MMY79_14840	COG1595	DNA-templated transcription, initiation
MMY79_14870	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
MMY79_14880	COG0405	Gamma-glutamyltransferase
MMY79_14885	COG2814	Major facilitator Superfamily
MMY79_14890	COG1566	PFAM secretion protein HlyD family protein
MMY79_14895	COG2050	protein possibly involved in aromatic compounds catabolism
MMY79_14910	COG1090	epimerase
MMY79_14930	COG0420	3'-5' exonuclease activity
MMY79_14940	COG1968	undecaprenyl-diphosphatase activity
MMY79_14960	COG0735	belongs to the Fur family
MMY79_14965	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
MMY79_14970	COG2914	Belongs to the UPF0125 (RnfH) family
MMY79_14985	COG0121	glutamine amidotransferase
MMY79_15000	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MMY79_15010	COG0210	DNA helicase
MMY79_15015	COG2885	chlorophyll binding
MMY79_15020	COG0204	Acyl-transferase
MMY79_15050	COG1280	lysine exporter protein (LysE YggA)
MMY79_15055	COG1674	ftsk spoiiie
MMY79_15060	COG0492	ferredoxin-NADP+ reductase activity
MMY79_15070	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
MMY79_15080	COG0456	acetyltransferase
MMY79_15095	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MMY79_15100	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
MMY79_15105	COG0049	tRNA binding
MMY79_15110	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MMY79_15125	COG1981	membrane
MMY79_15135	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
MMY79_15135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MMY79_15155	COG1012	belongs to the aldehyde dehydrogenase family
MMY79_15160	COG4638	Rieske (2fe-2S)
MMY79_15165	COG0657	acetylesterase activity
MMY79_15175	COG0473	3-isopropylmalate dehydrogenase activity
MMY79_15180	COG0583	DNA-binding transcription factor activity
MMY79_15200	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
MMY79_15240	COG0358	DNA primase activity
MMY79_15255	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
MMY79_15285	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MMY79_15315	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MMY79_15325	COG0352	thiamine-phosphate diphosphorylase activity
MMY79_15325	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MMY79_15325	COG0351	phosphomethylpyrimidine kinase
MMY79_15330	COG1652	LysM domain
MMY79_15355	COG1399	metal-binding, possibly nucleic acid-binding protein
MMY79_15360	COG3101	peptidyl-lysine hydroxylation
MMY79_15365	COG0009	L-threonylcarbamoyladenylate synthase
MMY79_15370	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MMY79_15375	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MMY79_15390	COG4106	trans-aconitate 2-methyltransferase activity
MMY79_15395	COG0156	8-amino-7-oxononanoate synthase activity
MMY79_15405	COG2267	carboxylic ester hydrolase activity
MMY79_15410	COG1877	trehalose-phosphatase activity
MMY79_15415	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
MMY79_15420	COG2223	nitrite transmembrane transporter activity
MMY79_15440	COG1196	nuclear chromosome segregation
MMY79_15450	COG0730	response to heat
MMY79_15465	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MMY79_15475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MMY79_15520	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MMY79_15525	COG0489	protein tyrosine kinase activity
MMY79_15535	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MMY79_15535	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MMY79_15570	COG2515	1-aminocyclopropane-1-carboxylate deaminase
MMY79_15575	COG2081	HI0933 family
MMY79_15585	COG0668	transmembrane transport
MMY79_15605	COG0583	DNA-binding transcription factor activity
MMY79_15625	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
MMY79_15630	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MMY79_15645	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
MMY79_15660	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
MMY79_15685	COG2199	diguanylate cyclase activity
MMY79_15700	COG0745	RESPONSE REGULATOR receiver
MMY79_15720	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MMY79_15755	COG0110	maltose O-acetyltransferase activity
MMY79_15760	COG0438	transferase activity, transferring glycosyl groups
MMY79_15830	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
MMY79_15835	COG0583	DNA-binding transcription factor activity
MMY79_15895	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MMY79_15910	COG0583	DNA-binding transcription factor activity
MMY79_15920	COG0612	Peptidase, M16
MMY79_15925	COG0612	Peptidase, M16
MMY79_15930	COG4771	TonB-dependent receptor
MMY79_15935	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
MMY79_15940	COG0583	DNA-binding transcription factor activity
MMY79_15955	COG0583	DNA-binding transcription factor activity
MMY79_15960	COG1053	succinate dehydrogenase
MMY79_15985	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MMY79_15990	COG2814	Major facilitator Superfamily
MMY79_15995	COG1960	acyl-CoA dehydrogenase activity
MMY79_16000	COG0583	DNA-binding transcription factor activity
MMY79_16005	COG1063	alcohol dehydrogenase
MMY79_16035	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
MMY79_16040	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
MMY79_16045	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MMY79_16065	COG2132	Multicopper oxidase
MMY79_16075	COG0561	phosphatase activity
MMY79_16080	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MMY79_16090	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
MMY79_16105	COG1214	PFAM Peptidase M22, glycoprotease
MMY79_16115	COG0494	nUDIX hydrolase
MMY79_16165	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MMY79_16170	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
MMY79_16175	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MMY79_16235	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MMY79_16245	COG1846	Transcriptional regulator
MMY79_16250	COG1764	response to oxidative stress
MMY79_16290	COG0037	tRNA processing
MMY79_16300	COG0248	Ppx GppA phosphatase
MMY79_16330	COG0072	phenylalanine-tRNA ligase activity
MMY79_16350	COG0291	Belongs to the bacterial ribosomal protein bL35 family
MMY79_16360	COG1238	metal cluster binding
MMY79_16365	COG0625	glutathione transferase activity
MMY79_16370	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MMY79_16380	COG0318	PFAM AMP-dependent synthetase and ligase
MMY79_16385	COG3028	Belongs to the UPF0307 family
MMY79_16390	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
MMY79_16410	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MMY79_16415	COG0617	tRNA 3'-terminal CCA addition
MMY79_16420	COG1555	photosystem II stabilization
MMY79_16425	COG3956	TIGRFAM MazG family protein
MMY79_16435	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MMY79_16455	COG0784	Response regulator, receiver
MMY79_16455	COG2205	protein histidine kinase activity
MMY79_16455	COG5002	protein histidine kinase activity
MMY79_16460	COG1024	Enoyl-CoA hydratase
MMY79_16465	COG2084	Dehydrogenase
MMY79_16470	COG3622	Belongs to the hyi family
MMY79_16500	COG0697	spore germination
MMY79_16510	COG2814	Major facilitator Superfamily
MMY79_16515	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MMY79_16525	COG0583	DNA-binding transcription factor activity
MMY79_16535	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
MMY79_16545	COG0084	hydrolase, TatD family'
MMY79_16560	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
MMY79_16585	COG0440	acetolactate synthase activity
MMY79_16590	COG0028	Belongs to the TPP enzyme family
MMY79_16615	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MMY79_16620	COG0577	efflux transmembrane transporter activity
MMY79_16620	COG1136	(ABC) transporter
MMY79_16645	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
MMY79_16650	COG1162	GTPase activity
MMY79_16660	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
MMY79_16670	COG2091	lysine biosynthetic process via aminoadipic acid
MMY79_16680	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MMY79_16685	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_16725	COG2986	histidine ammonia-lyase
MMY79_16735	COG1216	Glycosyl transferase, family 2
MMY79_16740	COG0318	PFAM AMP-dependent synthetase and ligase
MMY79_16750	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MMY79_16775	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
MMY79_16795	COG1426	Protein conserved in bacteria
MMY79_16830	COG0793	Belongs to the peptidase S41A family
MMY79_16845	COG2267	carboxylic ester hydrolase activity
MMY79_16855	COG3265	gluconokinase activity
MMY79_16865	COG0800	Aldolase
MMY79_16880	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MMY79_16885	COG0280	phosphate acetyltransferase
MMY79_16885	COG0857	belongs to the CobB CobQ family
MMY79_16890	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
MMY79_16890	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
MMY79_16910	COG0740	serine-type endopeptidase activity
MMY79_16920	COG4774	siderophore transport
MMY79_16930	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MMY79_16940	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MMY79_16940	COG2813	Specifically methylates the guanine in position
MMY79_17040	COG0788	formyltetrahydrofolate deformylase activity
MMY79_17065	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MMY79_17065	COG4651	solute:proton antiporter activity
MMY79_17085	COG0724	RNA recognition motif
MMY79_17090	COG0210	DNA helicase
MMY79_17115	COG1733	regulation of RNA biosynthetic process
MMY79_17120	COG0604	alcohol dehydrogenase
MMY79_17125	COG2900	Belongs to the SlyX family
MMY79_17130	COG0488	(ABC) transporter
MMY79_17140	COG1560	Kdo2-lipid A biosynthetic process
MMY79_17150	COG1301	dicarboxylic acid transport
MMY79_17205	COG0473	3-isopropylmalate dehydrogenase activity
MMY79_17230	COG0583	DNA-binding transcription factor activity
MMY79_17265	COG0583	DNA-binding transcription factor activity
MMY79_17275	COG0625	glutathione transferase activity
MMY79_17280	COG2378	regulation of single-species biofilm formation
MMY79_17295	COG1530	ribonuclease E activity
MMY79_17300	COG0318	PFAM AMP-dependent synthetase and ligase
MMY79_17315	COG0583	DNA-binding transcription factor activity
MMY79_17320	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_17325	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MMY79_17335	COG0534	Mate efflux family protein
MMY79_17350	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MMY79_17380	COG0493	'glutamate synthase
MMY79_17390	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
MMY79_17395	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MMY79_17410	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MMY79_17420	COG0644	oxidoreductase
MMY79_17420	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
MMY79_17435	COG4535	Mg2 and Co2 transporter CorC
MMY79_17445	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MMY79_17470	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MMY79_17475	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MMY79_17475	COG0475	glutathione-regulated potassium exporter activity
MMY79_17480	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
MMY79_17490	COG0484	heat shock protein binding
MMY79_17495	COG0789	Transcriptional regulator
MMY79_17500	COG0598	Magnesium transport protein CorA
MMY79_17505	COG1185	polyribonucleotide nucleotidyltransferase activity
MMY79_17515	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MMY79_17520	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MMY79_17525	COG1074	ATP-dependent DNA helicase activity
MMY79_17530	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
MMY79_17550	COG2226	methyltransferase
MMY79_17560	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MMY79_17575	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MMY79_17590	COG2111	Na H antiporter
MMY79_17590	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MMY79_17595	COG1006	Multisubunit Na H antiporter MnhC subunit
MMY79_17600	COG0651	ATP synthesis coupled electron transport
MMY79_17605	COG1863	multisubunit Na H antiporter MnhE subunit
MMY79_17610	COG2212	antiporter activity
MMY79_17615	COG1320	monovalent cation:proton antiporter activity
MMY79_17620	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
MMY79_17630	COG0195	Participates in both transcription termination and antitermination
MMY79_17680	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
MMY79_17685	COG0237	dephospho-CoA kinase activity
MMY79_17695	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MMY79_17710	COG0497	DNA recombination
MMY79_17720	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MMY79_17755	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MMY79_17755	COG2169	Transcriptional regulator
MMY79_17765	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MMY79_17830	COG1132	(ABC) transporter
MMY79_17840	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
MMY79_17855	COG0326	Molecular chaperone. Has ATPase activity
MMY79_17870	COG2056	Na+-H+ antiporter family
MMY79_17910	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
MMY79_17940	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MMY79_17970	COG0546	phosphoglycolate phosphatase activity
MMY79_17975	COG1716	ATPase activity
MMY79_18020	COG0181	hydroxymethylbilane synthase activity
MMY79_18030	COG3275	phosphorelay sensor kinase activity
MMY79_18050	COG1538	Outer membrane efflux protein
MMY79_18060	COG0697	spore germination
MMY79_18085	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
MMY79_18090	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
MMY79_18095	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MMY79_18100	COG0772	Belongs to the SEDS family
MMY79_18125	COG4974	Belongs to the 'phage' integrase family
MMY79_18130	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MMY79_18140	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MMY79_18150	COG2197	response regulator
MMY79_18165	COG0793	Belongs to the peptidase S41A family
MMY79_18170	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MMY79_18175	COG0795	lipopolysaccharide-transporting ATPase activity
MMY79_18215	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MMY79_18215	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MMY79_18225	COG0004	ammonium transporteR
MMY79_18230	COG0347	Belongs to the P(II) protein family
MMY79_18240	COG0606	chelatase, subunit chli
MMY79_18245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MMY79_18250	COG0235	Class ii aldolase
MMY79_18275	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
MMY79_18290	COG0318	PFAM AMP-dependent synthetase and ligase
MMY79_18300	COG0477	Major facilitator Superfamily
MMY79_18305	COG2860	membrane
MMY79_18315	COG1253	flavin adenine dinucleotide binding
MMY79_18330	COG2814	Major facilitator Superfamily
MMY79_18340	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MMY79_18380	COG0655	NAD(P)H dehydrogenase (quinone) activity
MMY79_18395	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MMY79_18430	COG1309	transcriptional regulator
MMY79_18465	COG0758	DNA mediated transformation
MMY79_18475	COG0697	spore germination
MMY79_18480	COG1309	transcriptional regulator
MMY79_18495	COG0386	Belongs to the glutathione peroxidase family
MMY79_18510	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MMY79_18520	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
MMY79_18560	COG1121	(ABC) transporter
MMY79_18565	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MMY79_18570	COG1280	lysine exporter protein (LysE YggA)
MMY79_18575	COG2837	iron assimilation
MMY79_18585	COG0281	malic enzyme
MMY79_18620	COG0735	belongs to the Fur family
MMY79_18630	COG0519	Catalyzes the synthesis of GMP from XMP
MMY79_18630	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MMY79_18635	COG4399	Belongs to the UPF0754 family
MMY79_18640	COG2259	Doxx family
MMY79_18645	COG0586	Pfam SNARE associated Golgi protein
MMY79_18660	COG1192	Involved in chromosome partitioning
MMY79_18670	COG0271	Belongs to the BolA IbaG family
MMY79_18705	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MMY79_18710	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_18710	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MMY79_18710	COG0318	PFAM AMP-dependent synthetase and ligase
MMY79_18710	COG0300	oxidoreductase activity
MMY79_18710	COG3321	synthase
MMY79_18715	COG1960	acyl-CoA dehydrogenase activity
MMY79_18725	COG2197	response regulator
MMY79_18735	COG3916	Acyl-homoserine-lactone synthase
MMY79_18745	COG1024	Enoyl-CoA hydratase
MMY79_18750	COG1024	Enoyl-CoA hydratase
MMY79_18755	COG1960	acyl-CoA dehydrogenase activity
MMY79_18760	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MMY79_18780	COG1113	amino acid transport
MMY79_18785	COG1113	amino acid transport
MMY79_18790	COG0251	oxidation-reduction process
MMY79_18830	COG0564	pseudouridine synthase activity
MMY79_18890	COG1051	belongs to the nudix hydrolase family
MMY79_18910	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MMY79_18925	COG1802	Transcriptional regulator
MMY79_18935	COG1448	Aminotransferase
MMY79_18940	COG0277	FAD linked oxidase domain protein
MMY79_18950	COG2186	Transcriptional regulator
MMY79_18960	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MMY79_18965	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MMY79_18980	COG1210	Utp--glucose-1-phosphate uridylyltransferase
MMY79_18990	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
MMY79_19000	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MMY79_19005	COG0438	transferase activity, transferring glycosyl groups
MMY79_19020	COG0438	transferase activity, transferring glycosyl groups
MMY79_19035	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
MMY79_19040	COG1596	polysaccharide export
MMY79_19075	COG3023	N-Acetylmuramoyl-L-alanine amidase
MMY79_19105	COG1017	nitric oxide dioxygenase activity
MMY79_19105	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MMY79_19130	COG0546	phosphoglycolate phosphatase activity
MMY79_19135	COG1028	Short-chain dehydrogenase reductase Sdr
MMY79_19150	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
MMY79_19150	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
MMY79_19155	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MMY79_19160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MMY79_19165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MMY79_19170	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MMY79_19175	COG1116	anion transmembrane transporter activity
MMY79_19180	COG1309	transcriptional regulator
MMY79_19185	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MMY79_19195	COG0196	riboflavin kinase activity
MMY79_19200	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MMY79_19210	COG1047	Peptidyl-prolyl cis-trans
MMY79_19250	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MMY79_19255	COG0657	acetylesterase activity
MMY79_19275	COG0583	DNA-binding transcription factor activity
MMY79_19305	COG2951	lytic endotransglycosylase activity
MMY79_19310	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
MMY79_19325	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
MMY79_19335	COG0671	phosphoesterase, PA-phosphatase related
MMY79_19340	COG0861	Integral membrane protein TerC family
MMY79_19350	COG0402	S-adenosylhomocysteine deaminase activity
MMY79_19365	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MMY79_19370	COG1230	cation diffusion facilitator family transporter
MMY79_19385	COG0706	membrane insertase activity