locus-tag class description J4G44_00010 PF10531 SLBB domain J4G44_00015 PF03819 MazG nucleotide pyrophosphohydrolase domain J4G44_00025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4G44_00025 PF01926 50S ribosome-binding GTPase J4G44_00030 PF01011 PQQ enzyme repeat J4G44_00030 PF13360 PQQ-like domain J4G44_00040 PF03129 Anticodon binding domain J4G44_00040 PF13393 Histidyl-tRNA synthetase J4G44_00045 PF04551 GcpE protein J4G44_00050 PF13464 Domain of unknown function (DUF4115) J4G44_00060 PF04055 Radical SAM superfamily J4G44_00065 PF00334 Nucleoside diphosphate kinase J4G44_00070 PF04384 Iron-sulphur cluster assembly J4G44_00075 PF01569 PAP2 superfamily J4G44_00080 PF13439 Glycosyltransferase Family 4 J4G44_00080 PF00534 Glycosyl transferases group 1 J4G44_00105 PF01063 Amino-transferase class IV J4G44_00110 PF08335 GlnD PII-uridylyltransferase J4G44_00110 PF03710 Glutamate-ammonia ligase adenylyltransferase J4G44_00130 PF00291 Pyridoxal-phosphate dependent enzyme J4G44_00135 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4G44_00140 PF07715 TonB-dependent Receptor Plug Domain J4G44_00140 PF00593 TonB dependent receptor J4G44_00145 PF01923 Cobalamin adenosyltransferase J4G44_00160 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4G44_00165 PF04237 YjbR J4G44_00180 PF00486 Transcriptional regulatory protein, C terminal J4G44_00180 PF00072 Response regulator receiver domain J4G44_00185 PF00672 HAMP domain J4G44_00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_00185 PF00512 His Kinase A (phospho-acceptor) domain J4G44_00195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_00195 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G44_00195 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_00195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_00200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_00200 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_00200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_00200 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G44_00205 PF06146 Phosphate-starvation-inducible E J4G44_00220 PF13091 PLD-like domain J4G44_00225 PF00593 TonB dependent receptor J4G44_00225 PF07715 TonB-dependent Receptor Plug Domain J4G44_00235 PF01336 OB-fold nucleic acid binding domain J4G44_00235 PF00152 tRNA synthetases class II (D, K and N) J4G44_00235 PF02938 GAD domain J4G44_00250 PF00535 Glycosyl transferase family 2 J4G44_00255 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_00260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4G44_00265 PF00483 Nucleotidyl transferase J4G44_00270 PF16363 GDP-mannose 4,6 dehydratase J4G44_00290 PF01522 Polysaccharide deacetylase J4G44_00305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4G44_00305 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4G44_00310 PF10369 Small subunit of acetolactate synthase J4G44_00315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4G44_00315 PF00205 Thiamine pyrophosphate enzyme, central domain J4G44_00315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4G44_00325 PF00133 tRNA synthetases class I (I, L, M and V) J4G44_00325 PF08264 Anticodon-binding domain of tRNA J4G44_00325 PF13603 Leucyl-tRNA synthetase, Domain 2 J4G44_00325 PF09334 tRNA synthetases class I (M) J4G44_00340 PF01814 Hemerythrin HHE cation binding domain J4G44_00345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G44_00350 PF12704 MacB-like periplasmic core domain J4G44_00350 PF02687 FtsX-like permease family J4G44_00350 PF00005 ABC transporter J4G44_00355 PF02321 Outer membrane efflux protein J4G44_00360 PF00512 His Kinase A (phospho-acceptor) domain J4G44_00360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_00360 PF01627 Hpt domain J4G44_00360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4G44_00360 PF00672 HAMP domain J4G44_00360 PF00072 Response regulator receiver domain J4G44_00365 PF03971 Monomeric isocitrate dehydrogenase J4G44_00380 PF02547 Queuosine biosynthesis protein J4G44_00390 PF04011 LemA family J4G44_00395 PF00990 Diguanylate cyclase, GGDEF domain J4G44_00395 PF01590 GAF domain J4G44_00395 PF00563 EAL domain J4G44_00395 PF00360 Phytochrome region J4G44_00405 PF01702 Queuine tRNA-ribosyltransferase J4G44_00410 PF02699 Preprotein translocase subunit J4G44_00415 PF07549 SecD/SecF GG Motif J4G44_00415 PF02355 Protein export membrane protein J4G44_00415 PF13721 SecD export protein N-terminal TM region J4G44_00420 PF07549 SecD/SecF GG Motif J4G44_00420 PF02355 Protein export membrane protein J4G44_00430 PF04607 Region found in RelA / SpoT proteins J4G44_00430 PF02824 TGS domain J4G44_00430 PF13291 ACT domain J4G44_00435 PF05958 tRNA (Uracil-5-)-methyltransferase J4G44_00445 PF00291 Pyridoxal-phosphate dependent enzyme J4G44_00450 PF07282 Putative transposase DNA-binding domain J4G44_00450 PF01385 Probable transposase J4G44_00450 PF12323 Helix-turn-helix domain J4G44_00455 PF00072 Response regulator receiver domain J4G44_00455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_00455 PF00512 His Kinase A (phospho-acceptor) domain J4G44_00455 PF01627 Hpt domain J4G44_00455 PF00672 HAMP domain J4G44_00455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4G44_00460 PF00378 Enoyl-CoA hydratase/isomerase J4G44_00465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4G44_00465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4G44_00470 PF01261 Xylose isomerase-like TIM barrel J4G44_00480 PF02233 NAD(P) transhydrogenase beta subunit J4G44_00485 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4G44_00490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4G44_00490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4G44_00500 PF07690 Major Facilitator Superfamily J4G44_00510 PF01207 Dihydrouridine synthase (Dus) J4G44_00515 PF00899 ThiF family J4G44_00520 PF01026 TatD related DNase J4G44_00535 PF16658 Class II release factor RF3, C-terminal domain J4G44_00535 PF00009 Elongation factor Tu GTP binding domain J4G44_00535 PF03144 Elongation factor Tu domain 2 J4G44_00545 PF03707 Bacterial signalling protein N terminal repeat J4G44_00545 PF00990 Diguanylate cyclase, GGDEF domain J4G44_00545 PF00563 EAL domain J4G44_00550 PF17804 Tail specific protease N-terminal domain J4G44_00550 PF03572 Peptidase family S41 J4G44_00550 PF00595 PDZ domain J4G44_00550 PF11818 C-terminal domain of tail specific protease (DUF3340) J4G44_00555 PF00933 Glycosyl hydrolase family 3 N terminal domain J4G44_00565 PF12697 Alpha/beta hydrolase family J4G44_00570 PF00171 Aldehyde dehydrogenase family J4G44_00580 PF00871 Acetokinase family J4G44_00585 PF01515 Phosphate acetyl/butaryl transferase J4G44_00585 PF07085 DRTGG domain J4G44_00590 PF00145 C-5 cytosine-specific DNA methylase J4G44_00600 PF01381 Helix-turn-helix J4G44_00605 PF13649 Methyltransferase domain J4G44_00610 PF05681 Fumarate hydratase (Fumerase) J4G44_00610 PF05683 Fumarase C-terminus J4G44_00620 PF07724 AAA domain (Cdc48 subfamily) J4G44_00620 PF10431 C-terminal, D2-small domain, of ClpB protein J4G44_00620 PF06689 ClpX C4-type zinc finger J4G44_00625 PF00574 Clp protease J4G44_00630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G44_00630 PF05698 Bacterial trigger factor protein (TF) C-terminus J4G44_00630 PF05697 Bacterial trigger factor protein (TF) J4G44_00635 PF00593 TonB dependent receptor J4G44_00635 PF07715 TonB-dependent Receptor Plug Domain J4G44_00640 PF07715 TonB-dependent Receptor Plug Domain J4G44_00640 PF00593 TonB dependent receptor J4G44_00645 PF13640 2OG-Fe(II) oxygenase superfamily J4G44_00645 PF18331 PKHD-type hydroxylase C-terminal domain J4G44_00650 PF01070 FMN-dependent dehydrogenase J4G44_00655 PF00682 HMGL-like J4G44_00655 PF08502 LeuA allosteric (dimerisation) domain J4G44_00660 PF00561 alpha/beta hydrolase fold J4G44_00665 PF00561 alpha/beta hydrolase fold J4G44_00665 PF07021 Methionine biosynthesis protein MetW J4G44_00680 PF01725 Ham1 family J4G44_00685 PF02416 mttA/Hcf106 family J4G44_00690 PF02416 mttA/Hcf106 family J4G44_00695 PF00902 Sec-independent protein translocase protein (TatC) J4G44_00710 PF01790 Prolipoprotein diacylglyceryl transferase J4G44_00720 PF00303 Thymidylate synthase J4G44_00725 PF00186 Dihydrofolate reductase J4G44_00740 PF01625 Peptide methionine sulfoxide reductase J4G44_00745 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4G44_00775 PF17876 Cold shock domain J4G44_00775 PF08461 Ribonuclease R winged-helix domain J4G44_00775 PF08206 Ribonuclease B OB domain J4G44_00775 PF00575 S1 RNA binding domain J4G44_00775 PF00773 RNB domain J4G44_00785 PF01432 Peptidase family M3 J4G44_00790 PF09526 Probable metal-binding protein (DUF2387) J4G44_00825 PF03937 Flavinator of succinate dehydrogenase J4G44_00830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_00830 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_00830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_00835 PF00743 Flavin-binding monooxygenase-like J4G44_00840 PF01196 Ribosomal protein L17 J4G44_00845 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4G44_00845 PF01000 RNA polymerase Rpb3/RpoA insert domain J4G44_00845 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4G44_00850 PF01479 S4 domain J4G44_00850 PF00163 Ribosomal protein S4/S9 N-terminal domain J4G44_00855 PF00411 Ribosomal protein S11 J4G44_00860 PF00416 Ribosomal protein S13/S18 J4G44_00865 PF00444 Ribosomal protein L36 J4G44_00870 PF00344 SecY translocase J4G44_00875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4G44_00880 PF00327 Ribosomal protein L30p/L7e J4G44_00885 PF00333 Ribosomal protein S5, N-terminal domain J4G44_00885 PF03719 Ribosomal protein S5, C-terminal domain J4G44_00890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4G44_00895 PF00347 Ribosomal protein L6 J4G44_00900 PF00410 Ribosomal protein S8 J4G44_00905 PF00253 Ribosomal protein S14p/S29e J4G44_00910 PF00673 ribosomal L5P family C-terminus J4G44_00910 PF00281 Ribosomal protein L5 J4G44_00915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4G44_00915 PF00467 KOW motif J4G44_00920 PF00238 Ribosomal protein L14p/L23e J4G44_00925 PF00366 Ribosomal protein S17 J4G44_00930 PF00831 Ribosomal L29 protein J4G44_00935 PF00252 Ribosomal protein L16p/L10e J4G44_00940 PF00189 Ribosomal protein S3, C-terminal domain J4G44_00940 PF07650 KH domain J4G44_00945 PF00237 Ribosomal protein L22p/L17e J4G44_00950 PF00203 Ribosomal protein S19 J4G44_00955 PF03947 Ribosomal Proteins L2, C-terminal domain J4G44_00955 PF00181 Ribosomal Proteins L2, RNA binding domain J4G44_00960 PF00276 Ribosomal protein L23 J4G44_00965 PF00573 Ribosomal protein L4/L1 family J4G44_00970 PF00297 Ribosomal protein L3 J4G44_00975 PF00338 Ribosomal protein S10p/S20e J4G44_00980 PF00117 Glutamine amidotransferase class-I J4G44_00985 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G44_00990 PF05872 Bacterial protein of unknown function (DUF853) J4G44_00995 PF00175 Oxidoreductase NAD-binding domain J4G44_00995 PF00042 Globin J4G44_00995 PF00970 Oxidoreductase FAD-binding domain J4G44_01000 PF02082 Transcriptional regulator J4G44_01005 PF01926 50S ribosome-binding GTPase J4G44_01015 PF00375 Sodium:dicarboxylate symporter family J4G44_01025 PF01553 Acyltransferase J4G44_01045 PF17191 RecG wedge domain J4G44_01045 PF00271 Helicase conserved C-terminal domain J4G44_01045 PF00270 DEAD/DEAH box helicase J4G44_01050 PF00156 Phosphoribosyl transferase domain J4G44_01060 PF03641 Possible lysine decarboxylase J4G44_01065 PF01544 CorA-like Mg2+ transporter protein J4G44_01075 PF05494 MlaC protein J4G44_01080 PF02470 MlaD protein J4G44_01085 PF02405 Permease MlaE J4G44_01090 PF00005 ABC transporter J4G44_01095 PF00271 Helicase conserved C-terminal domain J4G44_01095 PF00270 DEAD/DEAH box helicase J4G44_01100 PF00459 Inositol monophosphatase family J4G44_01105 PF02780 Transketolase, C-terminal domain J4G44_01105 PF02779 Transketolase, pyrimidine binding domain J4G44_01105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4G44_01110 PF00925 GTP cyclohydrolase II J4G44_01115 PF06969 HemN C-terminal domain J4G44_01115 PF04055 Radical SAM superfamily J4G44_01120 PF01218 Coproporphyrinogen III oxidase J4G44_01130 PF01488 Shikimate / quinate 5-dehydrogenase J4G44_01130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4G44_01130 PF08501 Shikimate dehydrogenase substrate binding domain J4G44_01140 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_01140 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G44_01140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_01140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_01145 PF05163 DinB family J4G44_01150 PF09561 HpaII restriction endonuclease J4G44_01155 PF00145 C-5 cytosine-specific DNA methylase J4G44_01160 PF04055 Radical SAM superfamily J4G44_01160 PF06969 HemN C-terminal domain J4G44_01170 PF01554 MatE J4G44_01175 PF03109 ABC1 family J4G44_01190 PF01197 Ribosomal protein L31 J4G44_01195 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4G44_01210 PF01209 ubiE/COQ5 methyltransferase family J4G44_01220 PF13614 AAA domain J4G44_01225 PF01594 AI-2E family transporter J4G44_01230 PF00080 Copper/zinc superoxide dismutase (SODC) J4G44_01235 PF12823 Domain of unknown function (DUF3817) J4G44_01240 PF07690 Major Facilitator Superfamily J4G44_01255 PF01565 FAD binding domain J4G44_01255 PF02913 FAD linked oxidases, C-terminal domain J4G44_01260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G44_01260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G44_01265 PF00892 EamA-like transporter family J4G44_01275 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4G44_01275 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4G44_01275 PF09157 Pseudouridine synthase II TruB, C-terminal J4G44_01280 PF03280 Proteobacterial lipase chaperone protein J4G44_01285 PF00561 alpha/beta hydrolase fold J4G44_01290 PF00561 alpha/beta hydrolase fold J4G44_01295 PF01245 Ribosomal protein L19 J4G44_01300 PF01746 tRNA (Guanine-1)-methyltransferase J4G44_01305 PF01782 RimM N-terminal domain J4G44_01305 PF05239 PRC-barrel domain J4G44_01310 PF00886 Ribosomal protein S16 J4G44_01315 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor J4G44_01315 PF07963 Prokaryotic N-terminal methylation motif J4G44_01345 PF07963 Prokaryotic N-terminal methylation motif J4G44_01345 PF00114 Pilin (bacterial filament) J4G44_01350 PF02401 LytB protein J4G44_01355 PF00625 Guanylate kinase J4G44_01360 PF01192 RNA polymerase Rpb6 J4G44_01365 PF04607 Region found in RelA / SpoT proteins J4G44_01365 PF02824 TGS domain J4G44_01365 PF13291 ACT domain J4G44_01370 PF01042 Endoribonuclease L-PSP J4G44_01375 PF04324 BFD-like [2Fe-2S] binding domain J4G44_01380 PF00210 Ferritin-like domain J4G44_01390 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J4G44_01395 PF15864 Protein glycosylation ligase J4G44_01395 PF11846 Virulence factor membrane-bound polymerase, C-terminal J4G44_01395 PF04932 O-Antigen ligase J4G44_01405 PF07963 Prokaryotic N-terminal methylation motif J4G44_01405 PF00114 Pilin (bacterial filament) J4G44_01410 PF07963 Prokaryotic N-terminal methylation motif J4G44_01410 PF00114 Pilin (bacterial filament) J4G44_01420 PF04536 TPM domain J4G44_01425 PF04011 LemA family J4G44_01430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4G44_01430 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_01435 PF01493 GXGXG motif J4G44_01435 PF01645 Conserved region in glutamate synthase J4G44_01435 PF00310 Glutamine amidotransferases class-II J4G44_01435 PF04898 Glutamate synthase central domain J4G44_01445 PF01761 3-dehydroquinate synthase J4G44_01450 PF01202 Shikimate kinase J4G44_01455 PF11741 AMIN domain J4G44_01455 PF00263 Bacterial type II and III secretion system protein J4G44_01455 PF03958 Bacterial type II/III secretion system short domain J4G44_01455 PF07660 Secretin and TonB N terminus short domain J4G44_01465 PF04350 Pilus assembly protein, PilO J4G44_01470 PF05137 Fimbrial assembly protein (PilN) J4G44_01475 PF11104 Type IV pilus assembly protein PilM; J4G44_01480 PF00905 Penicillin binding protein transpeptidase domain J4G44_01480 PF00912 Transglycosylase J4G44_01480 PF17092 Penicillin-binding protein OB-like domain J4G44_01485 PF13847 Methyltransferase domain J4G44_01490 PF00953 Glycosyl transferase family 4 J4G44_01495 PF08245 Mur ligase middle domain J4G44_01495 PF02875 Mur ligase family, glutamate ligase domain J4G44_01495 PF01225 Mur ligase family, catalytic domain J4G44_01500 PF08245 Mur ligase middle domain J4G44_01500 PF02875 Mur ligase family, glutamate ligase domain J4G44_01500 PF01225 Mur ligase family, catalytic domain J4G44_01505 PF03717 Penicillin-binding Protein dimerisation domain J4G44_01505 PF00905 Penicillin binding protein transpeptidase domain J4G44_01515 PF01795 MraW methylase family J4G44_01530 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G44_01550 PF12848 ABC transporter J4G44_01550 PF00005 ABC transporter J4G44_01555 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G44_01560 PF00106 short chain dehydrogenase J4G44_01575 PF09371 Tex-like protein N-terminal domain J4G44_01575 PF00575 S1 RNA binding domain J4G44_01575 PF17674 HHH domain J4G44_01575 PF16921 Tex protein YqgF-like domain J4G44_01580 PF00072 Response regulator receiver domain J4G44_01580 PF00486 Transcriptional regulatory protein, C terminal J4G44_01585 PF00512 His Kinase A (phospho-acceptor) domain J4G44_01585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_01585 PF00672 HAMP domain J4G44_01590 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J4G44_01590 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J4G44_01620 PF00475 Imidazoleglycerol-phosphate dehydratase J4G44_01625 PF00117 Glutamine amidotransferase class-I J4G44_01635 PF00570 HRDC domain J4G44_01635 PF01612 3'-5' exonuclease J4G44_01640 PF00977 Histidine biosynthesis protein J4G44_01645 PF00892 EamA-like transporter family J4G44_01660 PF01636 Phosphotransferase enzyme family J4G44_01665 PF00977 Histidine biosynthesis protein J4G44_01690 PF00230 Major intrinsic protein J4G44_01710 PF02705 K+ potassium transporter J4G44_01720 PF00072 Response regulator receiver domain J4G44_01720 PF00196 Bacterial regulatory proteins, luxR family J4G44_01730 PF00925 GTP cyclohydrolase II J4G44_01730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4G44_01735 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4G44_01740 PF01029 NusB family J4G44_01745 PF00586 AIR synthase related protein, N-terminal domain J4G44_01745 PF02769 AIR synthase related protein, C-terminal domain J4G44_01750 PF04608 Phosphatidylglycerophosphatase A J4G44_01755 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_01755 PF14602 Hexapeptide repeat of succinyl-transferase J4G44_01755 PF12804 MobA-like NTP transferase domain J4G44_01760 PF01380 SIS domain J4G44_01810 PF16177 Acetyl-coenzyme A synthetase N-terminus J4G44_01810 PF13193 AMP-binding enzyme C-terminal domain J4G44_01810 PF00501 AMP-binding enzyme J4G44_01815 PF00924 Mechanosensitive ion channel J4G44_01815 PF05552 Conserved TM helix J4G44_01825 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4G44_01830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G44_01855 PF01368 DHH family J4G44_01855 PF02272 DHHA1 domain J4G44_01855 PF17768 RecJ OB domain J4G44_01860 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4G44_01860 PF01243 Pyridoxamine 5'-phosphate oxidase J4G44_01865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G44_01865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G44_01865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G44_01865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G44_01870 PF00478 IMP dehydrogenase / GMP reductase domain J4G44_01870 PF00571 CBS domain J4G44_01875 PF03692 Putative zinc- or iron-chelating domain J4G44_01880 PF01613 Flavin reductase like domain J4G44_01880 PF00258 Flavodoxin J4G44_01885 PF01169 Uncharacterized protein family UPF0016 J4G44_01890 PF00364 Biotin-requiring enzyme J4G44_01890 PF02817 e3 binding domain J4G44_01890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4G44_01895 PF17831 Pyruvate dehydrogenase E1 component middle domain J4G44_01895 PF00456 Transketolase, thiamine diphosphate binding domain J4G44_01910 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4G44_01915 PF12327 FtsZ family, C-terminal domain J4G44_01915 PF00091 Tubulin/FtsZ family, GTPase domain J4G44_01920 PF02491 SHS2 domain inserted in FTSA J4G44_01925 PF08478 POTRA domain, FtsQ-type J4G44_01925 PF03799 Cell division protein FtsQ J4G44_01930 PF01820 D-ala D-ala ligase N-terminus J4G44_01930 PF07478 D-ala D-ala ligase C-terminus J4G44_01935 PF01225 Mur ligase family, catalytic domain J4G44_01935 PF08245 Mur ligase middle domain J4G44_01935 PF02875 Mur ligase family, glutamate ligase domain J4G44_01940 PF04101 Glycosyltransferase family 28 C-terminal domain J4G44_01940 PF03033 Glycosyltransferase family 28 N-terminal domain J4G44_01945 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4G44_01945 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4G44_01980 PF00156 Phosphoribosyl transferase domain J4G44_01985 PF03372 Endonuclease/Exonuclease/phosphatase family J4G44_01990 PF03960 ArsC family J4G44_02000 PF07859 alpha/beta hydrolase fold J4G44_02005 PF02525 Flavodoxin-like fold J4G44_02010 PF00043 Glutathione S-transferase, C-terminal domain J4G44_02010 PF13417 Glutathione S-transferase, N-terminal domain J4G44_02015 PF11412 Disulphide bond corrector protein DsbC J4G44_02015 PF02683 Cytochrome C biogenesis protein transmembrane region J4G44_02050 PF00939 Sodium:sulfate symporter transmembrane region J4G44_02060 PF00204 DNA gyrase B J4G44_02060 PF00986 DNA gyrase B subunit, carboxyl terminus J4G44_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_02060 PF01751 Toprim domain J4G44_02065 PF05728 Uncharacterised protein family (UPF0227) J4G44_02075 PF02600 Disulfide bond formation protein DsbB J4G44_02080 PF04262 Glutamate-cysteine ligase J4G44_02095 PF04286 Protein of unknown function (DUF445) J4G44_02100 PF00155 Aminotransferase class I and II J4G44_02105 PF01554 MatE J4G44_02110 PF00106 short chain dehydrogenase J4G44_02120 PF00072 Response regulator receiver domain J4G44_02120 PF00486 Transcriptional regulatory protein, C terminal J4G44_02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_02125 PF00512 His Kinase A (phospho-acceptor) domain J4G44_02125 PF00989 PAS fold J4G44_02125 PF11808 Phosphate regulon sensor protein PhoR J4G44_02130 PF02666 Phosphatidylserine decarboxylase J4G44_02135 PF00581 Rhodanese-like domain J4G44_02140 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4G44_02140 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4G44_02145 PF02580 D-Tyr-tRNA(Tyr) deacylase J4G44_02175 PF02503 Polyphosphate kinase middle domain J4G44_02175 PF13090 Polyphosphate kinase C-terminal domain 2 J4G44_02175 PF17941 Polyphosphate kinase C-terminal domain 1 J4G44_02175 PF13089 Polyphosphate kinase N-terminal domain J4G44_02180 PF00857 Isochorismatase family J4G44_02190 PF07690 Major Facilitator Superfamily J4G44_02195 PF00701 Dihydrodipicolinate synthetase family J4G44_02205 PF01259 SAICAR synthetase J4G44_02210 PF00313 'Cold-shock' DNA-binding domain J4G44_02215 PF00004 ATPase family associated with various cellular activities (AAA) J4G44_02215 PF16193 AAA C-terminal domain J4G44_02215 PF12002 MgsA AAA+ ATPase C terminal J4G44_02220 PF03692 Putative zinc- or iron-chelating domain J4G44_02225 PF07043 Protein of unknown function (DUF1328) J4G44_02240 PF00633 Helix-hairpin-helix motif J4G44_02240 PF00730 HhH-GPD superfamily base excision DNA repair protein J4G44_02240 PF14815 NUDIX domain J4G44_02240 PF10576 Iron-sulfur binding domain of endonuclease III J4G44_02255 PF03352 Methyladenine glycosylase J4G44_02260 PF08240 Alcohol dehydrogenase GroES-like domain J4G44_02260 PF00107 Zinc-binding dehydrogenase J4G44_02265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G44_02265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4G44_02270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G44_02270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4G44_02275 PF03023 Lipid II flippase MurJ J4G44_02280 PF01510 N-acetylmuramoyl-L-alanine amidase J4G44_02285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4G44_02285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4G44_02295 PF03725 3' exoribonuclease family, domain 2 J4G44_02295 PF01138 3' exoribonuclease family, domain 1 J4G44_02300 PF00440 Bacterial regulatory proteins, tetR family J4G44_02305 PF01323 DSBA-like thioredoxin domain J4G44_02315 PF13419 Haloacid dehalogenase-like hydrolase J4G44_02320 PF00106 short chain dehydrogenase J4G44_02325 PF03358 NADPH-dependent FMN reductase J4G44_02350 PF00696 Amino acid kinase family J4G44_02350 PF00583 Acetyltransferase (GNAT) family J4G44_02355 PF09084 NMT1/THI5 like J4G44_02360 PF09084 NMT1/THI5 like J4G44_02365 PF00296 Luciferase-like monooxygenase J4G44_02370 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_02375 PF00005 ABC transporter J4G44_02380 PF08362 YcdC-like protein, C-terminal region J4G44_02380 PF00440 Bacterial regulatory proteins, tetR family J4G44_02390 PF06574 FAD synthetase J4G44_02390 PF01687 Riboflavin kinase J4G44_02395 PF06827 Zinc finger found in FPG and IleRS J4G44_02395 PF08264 Anticodon-binding domain of tRNA J4G44_02395 PF00133 tRNA synthetases class I (I, L, M and V) J4G44_02400 PF01252 Signal peptidase (SPase) II J4G44_02405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G44_02410 PF07995 Glucose / Sorbosone dehydrogenase J4G44_02415 PF07690 Major Facilitator Superfamily J4G44_02445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4G44_02455 PF07282 Putative transposase DNA-binding domain J4G44_02455 PF12323 Helix-turn-helix domain J4G44_02455 PF01385 Probable transposase J4G44_02465 PF07859 alpha/beta hydrolase fold J4G44_02475 PF01025 GrpE J4G44_02480 PF00012 Hsp70 protein J4G44_02495 PF13406 Transglycosylase SLT domain J4G44_02500 PF02222 ATP-grasp domain J4G44_02500 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4G44_02505 PF00731 AIR carboxylase J4G44_02515 PF01225 Mur ligase family, catalytic domain J4G44_02515 PF02875 Mur ligase family, glutamate ligase domain J4G44_02515 PF08245 Mur ligase middle domain J4G44_02520 PF08240 Alcohol dehydrogenase GroES-like domain J4G44_02520 PF00107 Zinc-binding dehydrogenase J4G44_02530 PF03741 Integral membrane protein TerC family J4G44_02535 PF01979 Amidohydrolase family J4G44_02540 PF00156 Phosphoribosyl transferase domain J4G44_02550 PF13098 Thioredoxin-like domain J4G44_02550 PF10411 Disulfide bond isomerase protein N-terminus J4G44_02555 PF01545 Cation efflux family J4G44_02560 PF02583 Metal-sensitive transcriptional repressor J4G44_02575 PF01926 50S ribosome-binding GTPase J4G44_02575 PF12631 MnmE helical domain J4G44_02575 PF10396 GTP-binding protein TrmE N-terminus J4G44_02580 PF02096 60Kd inner membrane protein J4G44_02580 PF14849 YidC periplasmic domain J4G44_02585 PF01809 Putative membrane protein insertion efficiency factor J4G44_02590 PF00825 Ribonuclease P J4G44_02595 PF00468 Ribosomal protein L34 J4G44_02600 PF00308 Bacterial dnaA protein J4G44_02600 PF08299 Bacterial dnaA protein helix-turn-helix J4G44_02600 PF11638 DnaA N-terminal domain J4G44_02605 PF00712 DNA polymerase III beta subunit, N-terminal domain J4G44_02605 PF02767 DNA polymerase III beta subunit, central domain J4G44_02605 PF02768 DNA polymerase III beta subunit, C-terminal domain J4G44_02610 PF02463 RecF/RecN/SMC N terminal domain J4G44_02615 PF00204 DNA gyrase B J4G44_02615 PF01751 Toprim domain J4G44_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_02615 PF18053 DNA gyrase B subunit insert domain J4G44_02615 PF00986 DNA gyrase B subunit, carboxyl terminus J4G44_02625 PF12848 ABC transporter J4G44_02625 PF00005 ABC transporter J4G44_02645 PF01521 Iron-sulphur cluster biosynthesis J4G44_02650 PF03702 Anhydro-N-acetylmuramic acid kinase J4G44_02655 PF00579 tRNA synthetases class I (W and Y) J4G44_02695 PF00171 Aldehyde dehydrogenase family J4G44_02700 PF00209 Sodium:neurotransmitter symporter family J4G44_02710 PF01189 16S rRNA methyltransferase RsmB/F J4G44_02710 PF01029 NusB family J4G44_02715 PF02911 Formyl transferase, C-terminal domain J4G44_02715 PF00551 Formyl transferase J4G44_02720 PF00920 Dehydratase family J4G44_02725 PF00920 Dehydratase family J4G44_02750 PF00860 Permease family J4G44_02755 PF00990 Diguanylate cyclase, GGDEF domain J4G44_02755 PF00072 Response regulator receiver domain J4G44_02760 PF00311 Phosphoenolpyruvate carboxylase J4G44_02765 PF00440 Bacterial regulatory proteins, tetR family J4G44_02770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G44_02770 PF00529 HlyD membrane-fusion protein of T1SS J4G44_02775 PF00873 AcrB/AcrD/AcrF family J4G44_02785 PF00684 DnaJ central domain J4G44_02785 PF01556 DnaJ C terminal domain J4G44_02785 PF00226 DnaJ domain J4G44_02795 PF01113 Dihydrodipicolinate reductase, N-terminus J4G44_02795 PF05173 Dihydrodipicolinate reductase, C-terminus J4G44_02805 PF14052 Capsule assembly protein Wzi J4G44_02810 PF04480 Protein of unknown function (DUF559) J4G44_02815 PF13807 G-rich domain on putative tyrosine kinase J4G44_02815 PF02706 Chain length determinant protein J4G44_02815 PF13614 AAA domain J4G44_02820 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4G44_02825 PF02563 Polysaccharide biosynthesis/export protein J4G44_02825 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J4G44_02825 PF10531 SLBB domain J4G44_02830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G44_02830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G44_02830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G44_02840 PF04230 Polysaccharide pyruvyl transferase J4G44_02845 PF00535 Glycosyl transferase family 2 J4G44_02855 PF13439 Glycosyltransferase Family 4 J4G44_02855 PF00534 Glycosyl transferases group 1 J4G44_02860 PF02350 UDP-N-acetylglucosamine 2-epimerase J4G44_02865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G44_02865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G44_02865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G44_02875 PF01370 NAD dependent epimerase/dehydratase family J4G44_02880 PF00953 Glycosyl transferase family 4 J4G44_02890 PF02719 Polysaccharide biosynthesis protein J4G44_02895 PF00483 Nucleotidyl transferase J4G44_02900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G44_02900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G44_02900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G44_02905 PF00342 Phosphoglucose isomerase J4G44_02910 PF16363 GDP-mannose 4,6 dehydratase J4G44_02915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G44_02915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G44_02915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G44_02915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G44_02925 PF12419 SNF2 Helicase protein J4G44_02925 PF00271 Helicase conserved C-terminal domain J4G44_02925 PF00176 SNF2 family N-terminal domain J4G44_02930 PF07804 HipA-like C-terminal domain J4G44_02930 PF13657 HipA N-terminal domain J4G44_02950 PF01722 BolA-like protein J4G44_02955 PF04247 Invasion gene expression up-regulator, SirB J4G44_02960 PF13614 AAA domain J4G44_02975 PF09335 SNARE associated Golgi protein J4G44_02980 PF07681 DoxX J4G44_02985 PF00958 GMP synthase C terminal domain J4G44_02985 PF00117 Glutamine amidotransferase class-I J4G44_02985 PF02540 NAD synthase J4G44_02990 PF00990 Diguanylate cyclase, GGDEF domain J4G44_02990 PF00072 Response regulator receiver domain J4G44_03000 PF02678 Pirin J4G44_03000 PF05726 Pirin C-terminal cupin domain J4G44_03020 PF03485 Arginyl tRNA synthetase N terminal domain J4G44_03020 PF05746 DALR anticodon binding domain J4G44_03020 PF00750 tRNA synthetases class I (R) J4G44_03030 PF00390 Malic enzyme, N-terminal domain J4G44_03030 PF03949 Malic enzyme, NAD binding domain J4G44_03040 PF00512 His Kinase A (phospho-acceptor) domain J4G44_03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_03040 PF09456 RcsC Alpha-Beta-Loop (ABL) J4G44_03040 PF00072 Response regulator receiver domain J4G44_03045 PF04341 Protein of unknown function, DUF485 J4G44_03050 PF00474 Sodium:solute symporter family J4G44_03070 PF00990 Diguanylate cyclase, GGDEF domain J4G44_03070 PF00072 Response regulator receiver domain J4G44_03075 PF17755 UvrA DNA-binding domain J4G44_03075 PF17760 UvrA interaction domain J4G44_03080 PF08543 Phosphomethylpyrimidine kinase J4G44_03080 PF03070 TENA/THI-4/PQQC family J4G44_03080 PF02581 Thiamine monophosphate synthase J4G44_03090 PF07690 Major Facilitator Superfamily J4G44_03095 PF00436 Single-strand binding protein family J4G44_03100 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G44_03100 PF00578 AhpC/TSA family J4G44_03105 PF02678 Pirin J4G44_03105 PF05726 Pirin C-terminal cupin domain J4G44_03110 PF01593 Flavin containing amine oxidoreductase J4G44_03135 PF13296 Putative type VI secretion system Rhs element Vgr J4G44_03135 PF04717 Type VI secretion system, phage-baseplate injector J4G44_03135 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J4G44_03145 PF13936 Helix-turn-helix domain J4G44_03145 PF00665 Integrase core domain J4G44_03170 PF04261 Dyp-type peroxidase family J4G44_03175 PF01810 LysE type translocator J4G44_03185 PF00950 ABC 3 transport family J4G44_03190 PF00005 ABC transporter J4G44_03210 PF00119 ATP synthase A chain J4G44_03215 PF00137 ATP synthase subunit C J4G44_03220 PF00430 ATP synthase B/B' CF(0) J4G44_03225 PF00213 ATP synthase delta (OSCP) subunit J4G44_03230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G44_03230 PF00306 ATP synthase alpha/beta chain, C terminal domain J4G44_03230 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4G44_03235 PF00231 ATP synthase J4G44_03240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G44_03240 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4G44_03245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4G44_03255 PF00255 Glutathione peroxidase J4G44_03260 PF00892 EamA-like transporter family J4G44_03275 PF01300 Telomere recombination J4G44_03280 PF17782 DprA winged helix domain J4G44_03280 PF02481 DNA recombination-mediator protein A J4G44_03290 PF01327 Polypeptide deformylase J4G44_03330 PF07690 Major Facilitator Superfamily J4G44_03335 PF07690 Major Facilitator Superfamily J4G44_03340 PF04055 Radical SAM superfamily J4G44_03340 PF08497 Radical SAM N-terminal J4G44_03340 PF11842 Domain of unknown function (DUF3362) J4G44_03350 PF01042 Endoribonuclease L-PSP J4G44_03355 PF11799 impB/mucB/samB family C-terminal domain J4G44_03355 PF11798 IMS family HHH motif J4G44_03355 PF00817 impB/mucB/samB family J4G44_03365 PF01183 Glycosyl hydrolases family 25 J4G44_03370 PF07690 Major Facilitator Superfamily J4G44_03380 PF03641 Possible lysine decarboxylase J4G44_03390 PF03471 Transporter associated domain J4G44_03390 PF03741 Integral membrane protein TerC family J4G44_03390 PF00571 CBS domain J4G44_03395 PF02810 SEC-C motif J4G44_03400 PF03458 UPF0126 domain J4G44_03405 PF07690 Major Facilitator Superfamily J4G44_03410 PF03989 DNA gyrase C-terminal domain, beta-propeller J4G44_03410 PF00521 DNA gyrase/topoisomerase IV, subunit A J4G44_03415 PF00501 AMP-binding enzyme J4G44_03415 PF13193 AMP-binding enzyme C-terminal domain J4G44_03430 PF00719 Inorganic pyrophosphatase J4G44_03450 PF01078 Magnesium chelatase, subunit ChlI J4G44_03450 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4G44_03460 PF00543 Nitrogen regulatory protein P-II J4G44_03465 PF00909 Ammonium Transporter Family J4G44_03470 PF03477 ATP cone domain J4G44_03475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4G44_03475 PF01872 RibD C-terminal domain J4G44_03485 PF00677 Lumazine binding domain J4G44_03490 PF09335 SNARE associated Golgi protein J4G44_03510 PF02789 Cytosol aminopeptidase family, N-terminal domain J4G44_03510 PF00883 Cytosol aminopeptidase family, catalytic domain J4G44_03515 PF03739 Lipopolysaccharide export system permease LptF/LptG J4G44_03520 PF03739 Lipopolysaccharide export system permease LptF/LptG J4G44_03525 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4G44_03525 PF01676 Metalloenzyme superfamily J4G44_03530 PF01471 Putative peptidoglycan binding domain J4G44_03530 PF17820 PDZ domain J4G44_03530 PF03572 Peptidase family S41 J4G44_03535 PF02954 Bacterial regulatory protein, Fis family J4G44_03535 PF00158 Sigma-54 interaction domain J4G44_03535 PF00072 Response regulator receiver domain J4G44_03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_03540 PF00512 His Kinase A (phospho-acceptor) domain J4G44_03545 PF00196 Bacterial regulatory proteins, luxR family J4G44_03545 PF00072 Response regulator receiver domain J4G44_03550 PF00768 D-alanyl-D-alanine carboxypeptidase J4G44_03555 PF00291 Pyridoxal-phosphate dependent enzyme J4G44_03560 PF00742 Homoserine dehydrogenase J4G44_03560 PF01842 ACT domain J4G44_03560 PF03447 Homoserine dehydrogenase, NAD binding domain J4G44_03565 PF10411 Disulfide bond isomerase protein N-terminus J4G44_03565 PF13098 Thioredoxin-like domain J4G44_03570 PF02899 Phage integrase, N-terminal SAM-like domain J4G44_03570 PF00589 Phage integrase family J4G44_03580 PF07664 Ferrous iron transport protein B C terminus J4G44_03580 PF02421 Ferrous iron transport protein B J4G44_03580 PF07670 Nucleoside recognition J4G44_03590 PF02875 Mur ligase family, glutamate ligase domain J4G44_03590 PF08245 Mur ligase middle domain J4G44_03595 PF01098 Cell cycle protein J4G44_03605 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G44_03610 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4G44_03615 PF00149 Calcineurin-like phosphoesterase J4G44_03620 PF00293 NUDIX domain J4G44_03625 PF13667 ThiC-associated domain J4G44_03625 PF01964 Radical SAM ThiC family J4G44_03635 PF02321 Outer membrane efflux protein J4G44_03640 PF01895 PhoU domain J4G44_03645 PF04362 Bacterial Fe(2+) trafficking J4G44_03650 PF14698 Argininosuccinate lyase C-terminal J4G44_03650 PF00206 Lyase J4G44_03655 PF07694 5TMR of 5TMR-LYT J4G44_03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_03655 PF06580 Histidine kinase J4G44_03660 PF04397 LytTr DNA-binding domain J4G44_03660 PF00072 Response regulator receiver domain J4G44_03665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4G44_03665 PF03900 Porphobilinogen deaminase, C-terminal domain J4G44_03685 PF03061 Thioesterase superfamily J4G44_03690 PF00816 H-NS histone family J4G44_03705 PF00263 Bacterial type II and III secretion system protein J4G44_03705 PF03958 Bacterial type II/III secretion system short domain J4G44_03710 PF16697 Inner membrane component of T3SS, cytoplasmic domain J4G44_03715 PF13419 Haloacid dehalogenase-like hydrolase J4G44_03720 PF00425 chorismate binding enzyme J4G44_03720 PF04715 Anthranilate synthase component I, N terminal region J4G44_03745 PF00009 Elongation factor Tu GTP binding domain J4G44_03745 PF03144 Elongation factor Tu domain 2 J4G44_03745 PF03143 Elongation factor Tu C-terminal domain J4G44_03755 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4G44_03760 PF00467 KOW motif J4G44_03760 PF02357 Transcription termination factor nusG J4G44_03765 PF03946 Ribosomal protein L11, N-terminal domain J4G44_03765 PF00298 Ribosomal protein L11, RNA binding domain J4G44_03770 PF00687 Ribosomal protein L1p/L10e family J4G44_03775 PF00466 Ribosomal protein L10 J4G44_03780 PF00542 Ribosomal protein L7/L12 C-terminal domain J4G44_03780 PF16320 Ribosomal protein L7/L12 dimerisation domain J4G44_03785 PF04563 RNA polymerase beta subunit J4G44_03785 PF04561 RNA polymerase Rpb2, domain 2 J4G44_03785 PF04565 RNA polymerase Rpb2, domain 3 J4G44_03785 PF10385 RNA polymerase beta subunit external 1 domain J4G44_03785 PF00562 RNA polymerase Rpb2, domain 6 J4G44_03785 PF04560 RNA polymerase Rpb2, domain 7 J4G44_03790 PF00623 RNA polymerase Rpb1, domain 2 J4G44_03790 PF04998 RNA polymerase Rpb1, domain 5 J4G44_03790 PF04997 RNA polymerase Rpb1, domain 1 J4G44_03790 PF04983 RNA polymerase Rpb1, domain 3 J4G44_03790 PF05000 RNA polymerase Rpb1, domain 4 J4G44_03815 PF00561 alpha/beta hydrolase fold J4G44_03820 PF13726 Na+-H+ antiporter family J4G44_03820 PF03553 Na+/H+ antiporter family J4G44_03825 PF03922 OmpW family J4G44_03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_03835 PF00183 Hsp90 protein J4G44_03865 PF01323 DSBA-like thioredoxin domain J4G44_03880 PF02803 Thiolase, C-terminal domain J4G44_03880 PF00108 Thiolase, N-terminal domain J4G44_03885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4G44_03885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4G44_03885 PF00378 Enoyl-CoA hydratase/isomerase J4G44_03900 PF07724 AAA domain (Cdc48 subfamily) J4G44_03900 PF10431 C-terminal, D2-small domain, of ClpB protein J4G44_03905 PF08459 UvrC Helix-hairpin-helix N-terminal J4G44_03905 PF02151 UvrB/uvrC motif J4G44_03905 PF01541 GIY-YIG catalytic domain J4G44_03915 PF01066 CDP-alcohol phosphatidyltransferase J4G44_03920 PF00664 ABC transporter transmembrane region J4G44_03920 PF00005 ABC transporter J4G44_03935 PF03652 Holliday junction resolvase J4G44_03940 PF02622 Uncharacterized ACR, COG1678 J4G44_03965 PF02463 RecF/RecN/SMC N terminal domain J4G44_03970 PF06865 Pyrimidine/purine nucleoside phosphorylase J4G44_03975 PF00588 SpoU rRNA Methylase family J4G44_03975 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4G44_03985 PF01121 Dephospho-CoA kinase J4G44_03990 PF06750 Bacterial Peptidase A24 N-terminal domain J4G44_03990 PF01478 Type IV leader peptidase family J4G44_03995 PF00482 Type II secretion system (T2SS), protein F J4G44_04000 PF00437 Type II/IV secretion system protein J4G44_04000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4G44_04005 PF00121 Triosephosphate isomerase J4G44_04010 PF03840 Preprotein translocase SecG subunit J4G44_04035 PF02576 RimP N-terminal domain J4G44_04035 PF17384 RimP C-terminal SH3 domain J4G44_04040 PF13184 NusA-like KH domain J4G44_04040 PF00575 S1 RNA binding domain J4G44_04040 PF08529 NusA N-terminal domain J4G44_04045 PF11987 Translation-initiation factor 2 J4G44_04045 PF08364 Bacterial translation initiation factor IF-2 associated region J4G44_04045 PF04760 Translation initiation factor IF-2, N-terminal region J4G44_04045 PF00009 Elongation factor Tu GTP binding domain J4G44_04050 PF02033 Ribosome-binding factor A J4G44_04055 PF03334 Na+/H+ antiporter subunit J4G44_04060 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4G44_04065 PF01899 Na+/H+ ion antiporter subunit J4G44_04070 PF00361 Proton-conducting membrane transporter J4G44_04075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4G44_04080 PF00361 Proton-conducting membrane transporter J4G44_04080 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4G44_04080 PF13244 Domain of unknown function (DUF4040) J4G44_04080 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4G44_04095 PF01502 Phosphoribosyl-AMP cyclohydrolase J4G44_04105 PF03109 ABC1 family J4G44_04115 PF01209 ubiE/COQ5 methyltransferase family J4G44_04125 PF03976 Polyphosphate kinase 2 (PPK2) J4G44_04135 PF17946 RecC C-terminal domain J4G44_04140 PF12705 PD-(D/E)XK nuclease superfamily J4G44_04140 PF00580 UvrD/REP helicase N-terminal domain J4G44_04140 PF13361 UvrD-like helicase C-terminal domain J4G44_04145 PF13538 UvrD-like helicase C-terminal domain J4G44_04150 PF00312 Ribosomal protein S15 J4G44_04155 PF00013 KH domain J4G44_04155 PF01138 3' exoribonuclease family, domain 1 J4G44_04155 PF03725 3' exoribonuclease family, domain 2 J4G44_04155 PF00575 S1 RNA binding domain J4G44_04155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4G44_04185 PF01430 Hsp33 protein J4G44_04190 PF00999 Sodium/hydrogen exchanger family J4G44_04190 PF02254 TrkA-N domain J4G44_04195 PF00270 DEAD/DEAH box helicase J4G44_04195 PF00271 Helicase conserved C-terminal domain J4G44_04195 PF18074 Primosomal protein N C-terminal domain J4G44_04195 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4G44_04195 PF17764 3′ DNA-binding domain (3′BD) J4G44_04200 PF00482 Type II secretion system (T2SS), protein F J4G44_04205 PF08334 Type II secretion system (T2SS), protein G J4G44_04205 PF07963 Prokaryotic N-terminal methylation motif J4G44_04210 PF00795 Carbon-nitrogen hydrolase J4G44_04215 PF00571 CBS domain J4G44_04215 PF03471 Transporter associated domain J4G44_04220 PF01206 Sulfurtransferase TusA J4G44_04250 PF01177 Asp/Glu/Hydantoin racemase J4G44_04260 PF00762 Ferrochelatase J4G44_04265 PF00753 Metallo-beta-lactamase superfamily J4G44_04270 PF03884 DNA gyrase inhibitor YacG J4G44_04280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4G44_04280 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_04290 PF08241 Methyltransferase domain J4G44_04315 PF00035 Double-stranded RNA binding motif J4G44_04315 PF14622 Ribonuclease-III-like J4G44_04320 PF05746 DALR anticodon binding domain J4G44_04320 PF02092 Glycyl-tRNA synthetase beta subunit J4G44_04325 PF02091 Glycyl-tRNA synthetase alpha subunit J4G44_04330 PF01743 Poly A polymerase head domain J4G44_04330 PF00571 CBS domain J4G44_04335 PF04024 PspC domain J4G44_04360 PF00501 AMP-binding enzyme J4G44_04360 PF13193 AMP-binding enzyme C-terminal domain J4G44_04365 PF12111 Polyribonucleotide phosphorylase C terminal J4G44_04365 PF10150 Ribonuclease E/G family J4G44_04365 PF00575 S1 RNA binding domain J4G44_04370 PF00849 RNA pseudouridylate synthase J4G44_04370 PF01479 S4 domain J4G44_04375 PF13419 Haloacid dehalogenase-like hydrolase J4G44_04380 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4G44_04385 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation J4G44_04385 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G44_04390 PF07836 DmpG-like communication domain J4G44_04390 PF00682 HMGL-like J4G44_04395 PF03573 outer membrane porin, OprD family J4G44_04400 PF00561 alpha/beta hydrolase fold J4G44_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_04410 PF03466 LysR substrate binding domain J4G44_04415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4G44_04415 PF00355 Rieske [2Fe-2S] domain J4G44_04420 PF00866 Ring hydroxylating beta subunit J4G44_04425 PF00355 Rieske [2Fe-2S] domain J4G44_04430 PF00106 short chain dehydrogenase J4G44_04435 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4G44_04440 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_04440 PF14759 Reductase C-terminal J4G44_04455 PF00199 Catalase J4G44_04455 PF06628 Catalase-related immune-responsive J4G44_04465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_04465 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_04465 PF18158 Adaptive response protein AidB N-terminal domain J4G44_04480 PF05524 PEP-utilising enzyme, N-terminal J4G44_04480 PF01590 GAF domain J4G44_04480 PF02896 PEP-utilising enzyme, TIM barrel domain J4G44_04480 PF00391 PEP-utilising enzyme, mobile domain J4G44_04485 PF00293 NUDIX domain J4G44_04500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_04500 PF03466 LysR substrate binding domain J4G44_04515 PF00330 Aconitase family (aconitate hydratase) J4G44_04520 PF00694 Aconitase C-terminal domain J4G44_04530 PF00180 Isocitrate/isopropylmalate dehydrogenase J4G44_04540 PF01176 Translation initiation factor 1A / IF-1 J4G44_04550 PF01416 tRNA pseudouridine synthase J4G44_04555 PF17763 Glutaminase/Asparaginase C-terminal domain J4G44_04555 PF00710 Asparaginase, N-terminal J4G44_04570 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G44_04570 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4G44_04585 PF03279 Bacterial lipid A biosynthesis acyltransferase J4G44_04590 PF00005 ABC transporter J4G44_04590 PF16326 ABC transporter C-terminal domain J4G44_04590 PF12848 ABC transporter J4G44_04595 PF04102 SlyX J4G44_04610 PF08272 Topoisomerase I zinc-ribbon-like J4G44_04610 PF01751 Toprim domain J4G44_04610 PF01396 Topoisomerase DNA binding C4 zinc finger J4G44_04610 PF01131 DNA topoisomerase J4G44_04620 PF13361 UvrD-like helicase C-terminal domain J4G44_04620 PF00580 UvrD/REP helicase N-terminal domain J4G44_04625 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J4G44_04640 PF00999 Sodium/hydrogen exchanger family J4G44_04640 PF02254 TrkA-N domain J4G44_04645 PF00471 Ribosomal protein L33 J4G44_04650 PF00830 Ribosomal L28 family J4G44_04655 PF00171 Aldehyde dehydrogenase family J4G44_04660 PF00440 Bacterial regulatory proteins, tetR family J4G44_04660 PF08360 QacR-like protein, C-terminal region J4G44_04665 PF01842 ACT domain J4G44_04665 PF00551 Formyl transferase J4G44_04675 PF01618 MotA/TolQ/ExbB proton channel family J4G44_04690 PF03631 Virulence factor BrkB J4G44_04695 PF03358 NADPH-dependent FMN reductase J4G44_04730 PF02130 Uncharacterized protein family UPF0054 J4G44_04735 PF02562 PhoH-like protein J4G44_04740 PF01938 TRAM domain J4G44_04740 PF04055 Radical SAM superfamily J4G44_04740 PF00919 Uncharacterized protein family UPF0004 J4G44_04745 PF01551 Peptidase family M23 J4G44_04745 PF10145 Phage-related minor tail protein J4G44_04745 PF01464 Transglycosylase SLT domain J4G44_04755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4G44_04755 PF00056 lactate/malate dehydrogenase, NAD binding domain J4G44_04760 PF04143 Sulphur transport J4G44_04785 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4G44_04790 PF01066 CDP-alcohol phosphatidyltransferase J4G44_04825 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_04825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G44_04825 PF00403 Heavy-metal-associated domain J4G44_04840 PF04273 Putative phosphatase (DUF442) J4G44_04840 PF00753 Metallo-beta-lactamase superfamily J4G44_04850 PF00085 Thioredoxin J4G44_04855 PF03061 Thioesterase superfamily J4G44_04865 PF04461 Protein of unknown function (DUF520) J4G44_04875 PF01266 FAD dependent oxidoreductase J4G44_04875 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4G44_04885 PF03795 YCII-related domain J4G44_04890 PF04279 Intracellular septation protein A J4G44_04900 PF01062 Bestrophin, RFP-TM, chloride channel J4G44_04905 PF04002 RadC-like JAB domain J4G44_04910 PF04127 DNA / pantothenate metabolism flavoprotein J4G44_04910 PF02441 Flavoprotein J4G44_04915 PF02556 Preprotein translocase subunit SecB J4G44_04920 PF00462 Glutaredoxin J4G44_04930 PF03193 RsgA GTPase J4G44_04935 PF00929 Exonuclease J4G44_04945 PF12833 Helix-turn-helix domain J4G44_04945 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G44_04950 PF00290 Tryptophan synthase alpha chain J4G44_04955 PF01039 Carboxyl transferase domain J4G44_04960 PF08245 Mur ligase middle domain J4G44_04960 PF02875 Mur ligase family, glutamate ligase domain J4G44_04970 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G44_04970 PF00578 AhpC/TSA family J4G44_04975 PF07517 SecA DEAD-like domain J4G44_04975 PF02810 SEC-C motif J4G44_04975 PF01043 SecA preprotein cross-linking domain J4G44_04975 PF07516 SecA Wing and Scaffold domain J4G44_04985 PF01960 ArgJ family J4G44_04990 PF02445 Quinolinate synthetase A protein J4G44_05015 PF00691 OmpA family J4G44_05020 PF00563 EAL domain J4G44_05020 PF00990 Diguanylate cyclase, GGDEF domain J4G44_05020 PF03707 Bacterial signalling protein N terminal repeat J4G44_05060 PF04386 Stringent starvation protein B J4G44_05065 PF00043 Glutathione S-transferase, C-terminal domain J4G44_05065 PF02798 Glutathione S-transferase, N-terminal domain J4G44_05070 PF00380 Ribosomal protein S9/S16 J4G44_05075 PF00572 Ribosomal protein L13 J4G44_05085 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4G44_05090 PF00398 Ribosomal RNA adenine dimethylase J4G44_05095 PF00149 Calcineurin-like phosphoesterase J4G44_05125 PF16360 GTP-binding GTPase Middle Region J4G44_05125 PF13167 GTP-binding GTPase N-terminal J4G44_05125 PF01926 50S ribosome-binding GTPase J4G44_05135 PF13091 PLD-like domain J4G44_05140 PF00149 Calcineurin-like phosphoesterase J4G44_05140 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4G44_05145 PF07690 Major Facilitator Superfamily J4G44_05145 PF00083 Sugar (and other) transporter J4G44_05150 PF03006 Haemolysin-III related J4G44_05160 PF13673 Acetyltransferase (GNAT) domain J4G44_05170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4G44_05170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4G44_05170 PF00378 Enoyl-CoA hydratase/isomerase J4G44_05175 PF02803 Thiolase, C-terminal domain J4G44_05175 PF00108 Thiolase, N-terminal domain J4G44_05180 PF12833 Helix-turn-helix domain J4G44_05180 PF02311 AraC-like ligand binding domain J4G44_05185 PF02515 CoA-transferase family III J4G44_05190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4G44_05190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4G44_05200 PF01113 Dihydrodipicolinate reductase, N-terminus J4G44_05200 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain J4G44_05205 PF02803 Thiolase, C-terminal domain J4G44_05205 PF00108 Thiolase, N-terminal domain J4G44_05215 PF13505 Outer membrane protein beta-barrel domain J4G44_05215 PF00691 OmpA family J4G44_05220 PF00324 Amino acid permease J4G44_05225 PF08468 Methyltransferase small domain N-terminal J4G44_05225 PF05175 Methyltransferase small domain J4G44_05230 PF00860 Permease family J4G44_05235 PF03144 Elongation factor Tu domain 2 J4G44_05235 PF00009 Elongation factor Tu GTP binding domain J4G44_05235 PF00679 Elongation factor G C-terminus J4G44_05240 PF01741 Large-conductance mechanosensitive channel, MscL J4G44_05250 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4G44_05250 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4G44_05250 PF06827 Zinc finger found in FPG and IleRS J4G44_05255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G44_05265 PF12323 Helix-turn-helix domain J4G44_05265 PF01385 Probable transposase J4G44_05265 PF07282 Putative transposase DNA-binding domain J4G44_05280 PF01571 Aminomethyltransferase folate-binding domain J4G44_05285 PF00330 Aconitase family (aconitate hydratase) J4G44_05285 PF00694 Aconitase C-terminal domain J4G44_05290 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4G44_05295 PF01850 PIN domain J4G44_05320 PF00849 RNA pseudouridylate synthase J4G44_05335 PF04343 Protein of unknown function, DUF488 J4G44_05340 PF03831 PhnA domain J4G44_05340 PF08274 PhnA Zinc-Ribbon J4G44_05345 PF07411 Domain of unknown function (DUF1508) J4G44_05355 PF01207 Dihydrouridine synthase (Dus) J4G44_05365 PF02978 Signal peptide binding domain J4G44_05365 PF02881 SRP54-type protein, helical bundle domain J4G44_05365 PF00448 SRP54-type protein, GTPase domain J4G44_05370 PF03309 Type III pantothenate kinase J4G44_05380 PF01925 Sulfite exporter TauE/SafE J4G44_05390 PF02463 RecF/RecN/SMC N terminal domain J4G44_05390 PF06470 SMC proteins Flexible Hinge Domain J4G44_05395 PF04354 ZipA, C-terminal FtsZ-binding domain J4G44_05400 PF01653 NAD-dependent DNA ligase adenylation domain J4G44_05400 PF12826 Helix-hairpin-helix motif J4G44_05400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4G44_05400 PF00533 BRCA1 C Terminus (BRCT) domain J4G44_05400 PF03120 NAD-dependent DNA ligase OB-fold domain J4G44_05405 PF16363 GDP-mannose 4,6 dehydratase J4G44_05410 PF00210 Ferritin-like domain J4G44_05415 PF12697 Alpha/beta hydrolase family J4G44_05415 PF08241 Methyltransferase domain J4G44_05420 PF06968 Biotin and Thiamin Synthesis associated domain J4G44_05420 PF04055 Radical SAM superfamily J4G44_05420 PF00202 Aminotransferase class-III J4G44_05425 PF00155 Aminotransferase class I and II J4G44_05440 PF01479 S4 domain J4G44_05440 PF00849 RNA pseudouridylate synthase J4G44_05445 PF04079 Segregation and condensation complex subunit ScpB J4G44_05450 PF02616 Segregation and condensation protein ScpA J4G44_05460 PF01300 Telomere recombination J4G44_05465 PF04315 Elongation factor P hydroxylase J4G44_05470 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4G44_05475 PF01783 Ribosomal L32p protein family J4G44_05480 PF00698 Acyl transferase domain J4G44_05490 PF00550 Phosphopantetheine attachment site J4G44_05495 PF01476 LysM domain J4G44_05495 PF04972 BON domain J4G44_05510 PF00268 Ribonucleotide reductase, small chain J4G44_05515 PF03477 ATP cone domain J4G44_05515 PF02867 Ribonucleotide reductase, barrel domain J4G44_05515 PF00317 Ribonucleotide reductase, all-alpha domain J4G44_05520 PF00072 Response regulator receiver domain J4G44_05520 PF00486 Transcriptional regulatory protein, C terminal J4G44_05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_05525 PF00672 HAMP domain J4G44_05525 PF00512 His Kinase A (phospho-acceptor) domain J4G44_05530 PF00474 Sodium:solute symporter family J4G44_05535 PF01145 SPFH domain / Band 7 family J4G44_05545 PF01734 Patatin-like phospholipase J4G44_05560 PF04239 Protein of unknown function (DUF421) J4G44_05565 PF04480 Protein of unknown function (DUF559) J4G44_05575 PF13936 Helix-turn-helix domain J4G44_05575 PF00665 Integrase core domain J4G44_05585 PF00133 tRNA synthetases class I (I, L, M and V) J4G44_05585 PF08264 Anticodon-binding domain of tRNA J4G44_05585 PF10458 Valyl tRNA synthetase tRNA binding arm J4G44_05610 PF01906 Putative heavy-metal-binding J4G44_05615 PF01906 Putative heavy-metal-binding J4G44_05620 PF02321 Outer membrane efflux protein J4G44_05625 PF00873 AcrB/AcrD/AcrF family J4G44_05630 PF00529 HlyD membrane-fusion protein of T1SS J4G44_05630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G44_05635 PF01569 PAP2 superfamily J4G44_05645 PF00348 Polyprenyl synthetase J4G44_05650 PF00829 Ribosomal prokaryotic L21 protein J4G44_05655 PF01016 Ribosomal L27 protein J4G44_05660 PF03548 Outer membrane lipoprotein carrier protein LolA J4G44_05670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G44_05670 PF02403 Seryl-tRNA synthetase N-terminal domain J4G44_05675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4G44_05675 PF10414 Sirohaem synthase dimerisation region J4G44_05675 PF14824 Sirohaem biosynthesis protein central J4G44_05680 PF00588 SpoU rRNA Methylase family J4G44_05685 PF13520 Amino acid permease J4G44_05690 PF00465 Iron-containing alcohol dehydrogenase J4G44_05700 PF03099 Biotin/lipoate A/B protein ligase family J4G44_05705 PF04359 Protein of unknown function (DUF493) J4G44_05710 PF04545 Sigma-70, region 4 J4G44_05710 PF00140 Sigma-70 factor, region 1.2 J4G44_05710 PF04539 Sigma-70 region 3 J4G44_05710 PF04542 Sigma-70 region 2 J4G44_05710 PF04546 Sigma-70, non-essential region J4G44_05710 PF03979 Sigma-70 factor, region 1.1 J4G44_05735 PF09335 SNARE associated Golgi protein J4G44_05745 PF00581 Rhodanese-like domain J4G44_05745 PF17773 UPF0176 acylphosphatase like domain J4G44_05755 PF02261 Aspartate decarboxylase J4G44_05760 PF01195 Peptidyl-tRNA hydrolase J4G44_05765 PF01386 Ribosomal L25p family J4G44_05770 PF14572 Phosphoribosyl synthetase-associated domain J4G44_05770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4G44_05795 PF08544 GHMP kinases C terminal J4G44_05795 PF00288 GHMP kinases N terminal domain J4G44_05800 PF03550 Outer membrane lipoprotein LolB J4G44_05810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4G44_05810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4G44_05810 PF01488 Shikimate / quinate 5-dehydrogenase J4G44_05815 PF08278 DNA primase DnaG DnaB-binding J4G44_05815 PF10410 DnaB-helicase binding domain of primase J4G44_05815 PF08275 DNA primase catalytic core, N-terminal domain J4G44_05815 PF01807 CHC2 zinc finger J4G44_05820 PF13525 Outer membrane lipoprotein J4G44_05825 PF00849 RNA pseudouridylate synthase J4G44_05825 PF01479 S4 domain J4G44_05830 PF02578 Multi-copper polyphenol oxidoreductase laccase J4G44_05835 PF03358 NADPH-dependent FMN reductase J4G44_05840 PF01668 SmpB protein J4G44_05845 PF01467 Cytidylyltransferase-like J4G44_05850 PF00037 4Fe-4S binding domain J4G44_05875 PF02540 NAD synthase J4G44_05875 PF00795 Carbon-nitrogen hydrolase J4G44_05880 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J4G44_05880 PF04717 Type VI secretion system, phage-baseplate injector J4G44_05880 PF13296 Putative type VI secretion system Rhs element Vgr J4G44_05885 PF00285 Citrate synthase, C-terminal domain J4G44_05890 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4G44_05895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4G44_05900 PF00890 FAD binding domain J4G44_05900 PF02910 Fumarate reductase flavoprotein C-term J4G44_05905 PF13085 2Fe-2S iron-sulfur cluster binding domain J4G44_05910 PF16078 2-oxoglutarate dehydrogenase N-terminus J4G44_05910 PF00676 Dehydrogenase E1 component J4G44_05910 PF16870 2-oxoglutarate dehydrogenase C-terminal J4G44_05910 PF02779 Transketolase, pyrimidine binding domain J4G44_05915 PF02817 e3 binding domain J4G44_05915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4G44_05915 PF00364 Biotin-requiring enzyme J4G44_05920 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_05920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G44_05925 PF08442 ATP-grasp domain J4G44_05925 PF00549 CoA-ligase J4G44_05930 PF00549 CoA-ligase J4G44_05930 PF02629 CoA binding domain J4G44_05940 PF01522 Polysaccharide deacetylase J4G44_05940 PF14883 Hypothetical glycosyl hydrolase family 13 J4G44_05945 PF00535 Glycosyl transferase family 2 J4G44_05955 PF01522 Polysaccharide deacetylase J4G44_05955 PF14883 Hypothetical glycosyl hydrolase family 13 J4G44_05960 PF00579 tRNA synthetases class I (W and Y) J4G44_05965 PF05661 Protein of unknown function (DUF808) J4G44_05970 PF04228 Putative neutral zinc metallopeptidase J4G44_05975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4G44_05980 PF00582 Universal stress protein family J4G44_05985 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_05995 PF03449 Transcription elongation factor, N-terminal J4G44_05995 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G44_06000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G44_06000 PF02142 MGS-like domain J4G44_06000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4G44_06005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4G44_06005 PF00117 Glutamine amidotransferase class-I J4G44_06020 PF01985 CRS1 / YhbY (CRM) domain J4G44_06025 PF01728 FtsJ-like methyltransferase J4G44_06030 PF00004 ATPase family associated with various cellular activities (AAA) J4G44_06030 PF17862 AAA+ lid domain J4G44_06030 PF06480 FtsH Extracellular J4G44_06030 PF01434 Peptidase family M41 J4G44_06035 PF00809 Pterin binding enzyme J4G44_06055 PF09423 PhoD-like phosphatase J4G44_06055 PF16655 PhoD-like phosphatase, N-terminal domain J4G44_06075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4G44_06075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4G44_06090 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain J4G44_06090 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain J4G44_06095 PF00781 Diacylglycerol kinase catalytic domain J4G44_06100 PF00149 Calcineurin-like phosphoesterase J4G44_06105 PF00166 Chaperonin 10 Kd subunit J4G44_06110 PF00118 TCP-1/cpn60 chaperonin family J4G44_06125 PF00873 AcrB/AcrD/AcrF family J4G44_06130 PF00571 CBS domain J4G44_06130 PF01769 Divalent cation transporter J4G44_06130 PF03448 MgtE intracellular N domain J4G44_06140 PF01435 Peptidase family M48 J4G44_06145 PF01551 Peptidase family M23 J4G44_06145 PF10145 Phage-related minor tail protein J4G44_06145 PF01464 Transglycosylase SLT domain J4G44_06150 PF01171 PP-loop family J4G44_06160 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4G44_06160 PF01464 Transglycosylase SLT domain J4G44_06165 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G44_06165 PF03449 Transcription elongation factor, N-terminal J4G44_06185 PF02574 Homocysteine S-methyltransferase J4G44_06185 PF00809 Pterin binding enzyme J4G44_06185 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4G44_06185 PF02607 B12 binding domain J4G44_06185 PF02310 B12 binding domain J4G44_06190 PF01384 Phosphate transporter family J4G44_06210 PF01521 Iron-sulphur cluster biosynthesis J4G44_06210 PF01106 NifU-like domain J4G44_06220 PF00561 alpha/beta hydrolase fold J4G44_06225 PF00484 Carbonic anhydrase J4G44_06230 PF13472 GDSL-like Lipase/Acylhydrolase family J4G44_06235 PF00005 ABC transporter J4G44_06245 PF01694 Rhomboid family J4G44_06250 PF00912 Transglycosylase J4G44_06255 PF13090 Polyphosphate kinase C-terminal domain 2 J4G44_06255 PF17941 Polyphosphate kinase C-terminal domain 1 J4G44_06255 PF13089 Polyphosphate kinase N-terminal domain J4G44_06255 PF02503 Polyphosphate kinase middle domain J4G44_06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_06265 PF03466 LysR substrate binding domain J4G44_06270 PF00561 alpha/beta hydrolase fold J4G44_06275 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_06275 PF18113 Rubredoxin binding C-terminal domain J4G44_06280 PF00301 Rubredoxin J4G44_06285 PF00156 Phosphoribosyl transferase domain J4G44_06295 PF00152 tRNA synthetases class II (D, K and N) J4G44_06295 PF01336 OB-fold nucleic acid binding domain J4G44_06300 PF01381 Helix-turn-helix J4G44_06305 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB J4G44_06315 PF01507 Phosphoadenosine phosphosulfate reductase family J4G44_06320 PF00009 Elongation factor Tu GTP binding domain J4G44_06355 PF06505 Activator of aromatic catabolism J4G44_06355 PF02954 Bacterial regulatory protein, Fis family J4G44_06355 PF00158 Sigma-54 interaction domain J4G44_06355 PF02830 V4R domain J4G44_06360 PF06099 Phenol hydroxylase subunit J4G44_06365 PF02332 Methane/Phenol/Toluene Hydroxylase J4G44_06370 PF02406 MmoB/DmpM family J4G44_06375 PF02332 Methane/Phenol/Toluene Hydroxylase J4G44_06375 PF04945 YHS domain J4G44_06385 PF00970 Oxidoreductase FAD-binding domain J4G44_06385 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G44_06385 PF00175 Oxidoreductase NAD-binding domain J4G44_06390 PF00775 Dioxygenase J4G44_06390 PF04444 Catechol dioxygenase N terminus J4G44_06405 PF02678 Pirin J4G44_06405 PF17954 Quercetinase C-terminal cupin domain J4G44_06415 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4G44_06420 PF05675 Protein of unknown function (DUF817) J4G44_06435 PF00990 Diguanylate cyclase, GGDEF domain J4G44_06440 PF01227 GTP cyclohydrolase I J4G44_06450 PF00218 Indole-3-glycerol phosphate synthase J4G44_06455 PF02885 Glycosyl transferase family, helical bundle domain J4G44_06455 PF00591 Glycosyl transferase family, a/b domain J4G44_06460 PF00117 Glutamine amidotransferase class-I J4G44_06465 PF00120 Glutamine synthetase, catalytic domain J4G44_06465 PF03951 Glutamine synthetase, beta-Grasp domain J4G44_06470 PF04345 Chorismate lyase J4G44_06475 PF01040 UbiA prenyltransferase family J4G44_06510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4G44_06510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4G44_06515 PF01784 NIF3 (NGG1p interacting factor 3) J4G44_06520 PF17820 PDZ domain J4G44_06520 PF13180 PDZ domain J4G44_06530 PF18073 Rubredoxin metal binding domain J4G44_06535 PF01235 Sodium:alanine symporter family J4G44_06545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4G44_06545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4G44_06550 PF01678 Diaminopimelate epimerase J4G44_06555 PF00561 alpha/beta hydrolase fold J4G44_06560 PF02899 Phage integrase, N-terminal SAM-like domain J4G44_06560 PF00589 Phage integrase family J4G44_06570 PF01012 Electron transfer flavoprotein domain J4G44_06575 PF01012 Electron transfer flavoprotein domain J4G44_06575 PF00766 Electron transfer flavoprotein FAD-binding domain J4G44_06580 PF03989 DNA gyrase C-terminal domain, beta-propeller J4G44_06580 PF00521 DNA gyrase/topoisomerase IV, subunit A J4G44_06600 PF13533 Biotin-lipoyl like J4G44_06625 PF00266 Aminotransferase class-V J4G44_06640 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4G44_06655 PF02687 FtsX-like permease family J4G44_06655 PF12704 MacB-like periplasmic core domain J4G44_06660 PF00005 ABC transporter J4G44_06670 PF13567 Domain of unknown function (DUF4131) J4G44_06670 PF00753 Metallo-beta-lactamase superfamily J4G44_06670 PF03772 Competence protein J4G44_06680 PF01343 Peptidase family S49 J4G44_06680 PF06965 Na+/H+ antiporter 1 J4G44_06690 PF00551 Formyl transferase J4G44_06695 PF00586 AIR synthase related protein, N-terminal domain J4G44_06695 PF02769 AIR synthase related protein, C-terminal domain J4G44_06700 PF01594 AI-2E family transporter J4G44_06705 PF00308 Bacterial dnaA protein J4G44_06705 PF08299 Bacterial dnaA protein helix-turn-helix J4G44_06705 PF11638 DnaA N-terminal domain J4G44_06735 PF00588 SpoU rRNA Methylase family J4G44_06735 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4G44_06740 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4G44_06750 PF00691 OmpA family J4G44_06755 PF07676 WD40-like Beta Propeller Repeat J4G44_06755 PF04052 TolB amino-terminal domain J4G44_06765 PF02472 Biopolymer transport protein ExbD/TolR J4G44_06770 PF01618 MotA/TolQ/ExbB proton channel family J4G44_06775 PF03061 Thioesterase superfamily J4G44_06785 PF05491 RuvB C-terminal winged helix domain J4G44_06785 PF17864 RuvB AAA lid domain J4G44_06785 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4G44_06790 PF07499 RuvA, C-terminal domain J4G44_06790 PF01330 RuvA N terminal domain J4G44_06795 PF01966 HD domain J4G44_06800 PF01784 NIF3 (NGG1p interacting factor 3) J4G44_06805 PF00881 Nitroreductase family J4G44_06810 PF00378 Enoyl-CoA hydratase/isomerase J4G44_06815 PF01467 Cytidylyltransferase-like J4G44_06815 PF00293 NUDIX domain J4G44_06820 PF00578 AhpC/TSA family J4G44_06830 PF06508 Queuosine biosynthesis protein QueC J4G44_06840 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_06840 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J4G44_06840 PF14602 Hexapeptide repeat of succinyl-transferase J4G44_06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_06855 PF03466 LysR substrate binding domain J4G44_06860 PF00005 ABC transporter J4G44_06860 PF12857 TOBE-like domain J4G44_06865 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_06870 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_06890 PF02618 YceG-like family J4G44_06895 PF02223 Thymidylate kinase J4G44_06905 PF13419 Haloacid dehalogenase-like hydrolase J4G44_06910 PF00890 FAD binding domain J4G44_06910 PF02910 Fumarate reductase flavoprotein C-term J4G44_06915 PF13180 PDZ domain J4G44_06925 PF00679 Elongation factor G C-terminus J4G44_06925 PF06421 GTP-binding protein LepA C-terminus J4G44_06925 PF03144 Elongation factor Tu domain 2 J4G44_06925 PF00009 Elongation factor Tu GTP binding domain J4G44_06930 PF10502 Signal peptidase, peptidase S26 J4G44_06940 PF00035 Double-stranded RNA binding motif J4G44_06940 PF14622 Ribonuclease-III-like J4G44_06945 PF07650 KH domain J4G44_06945 PF01926 50S ribosome-binding GTPase J4G44_06955 PF02565 Recombination protein O C terminal J4G44_06955 PF11967 Recombination protein O N terminal J4G44_06960 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4G44_06965 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4G44_06980 PF00892 EamA-like transporter family J4G44_06985 PF00155 Aminotransferase class I and II J4G44_07000 PF00271 Helicase conserved C-terminal domain J4G44_07000 PF04851 Type III restriction enzyme, res subunit J4G44_07000 PF02151 UvrB/uvrC motif J4G44_07000 PF12344 Ultra-violet resistance protein B J4G44_07000 PF17757 UvrB interaction domain J4G44_07010 PF00892 EamA-like transporter family J4G44_07015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4G44_07015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4G44_07020 PF01638 HxlR-like helix-turn-helix J4G44_07025 PF07690 Major Facilitator Superfamily J4G44_07035 PF01018 GTP1/OBG J4G44_07035 PF01926 50S ribosome-binding GTPase J4G44_07040 PF00696 Amino acid kinase family J4G44_07040 PF01472 PUA domain J4G44_07050 PF00202 Aminotransferase class-III J4G44_07055 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4G44_07065 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_07070 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_07075 PF00005 ABC transporter J4G44_07085 PF01343 Peptidase family S49 J4G44_07085 PF08496 Peptidase family S49 N-terminal J4G44_07100 PF08328 Adenylosuccinate lyase C-terminal J4G44_07100 PF00206 Lyase J4G44_07105 PF04356 Protein of unknown function (DUF489) J4G44_07115 PF00293 NUDIX domain J4G44_07125 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_07130 PF07943 Penicillin-binding protein 5, C-terminal domain J4G44_07130 PF00768 D-alanyl-D-alanine carboxypeptidase J4G44_07145 PF01975 Survival protein SurE J4G44_07150 PF01476 LysM domain J4G44_07150 PF01551 Peptidase family M23 J4G44_07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_07155 PF03466 LysR substrate binding domain J4G44_07160 PF00202 Aminotransferase class-III J4G44_07165 PF00462 Glutaredoxin J4G44_07170 PF13654 AAA domain J4G44_07170 PF05362 Lon protease (S16) C-terminal proteolytic domain J4G44_07175 PF07690 Major Facilitator Superfamily J4G44_07180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4G44_07185 PF13593 SBF-like CPA transporter family (DUF4137) J4G44_07190 PF01197 Ribosomal protein L31 J4G44_07205 PF04055 Radical SAM superfamily J4G44_07210 PF01132 Elongation factor P (EF-P) OB domain J4G44_07210 PF08207 Elongation factor P (EF-P) KOW-like domain J4G44_07210 PF09285 Elongation factor P, C-terminal J4G44_07215 PF02554 Carbon starvation protein CstA J4G44_07215 PF13722 5TM C-terminal transporter carbon starvation CstA J4G44_07220 PF04328 Selenoprotein, putative J4G44_07225 PF07726 ATPase family associated with various cellular activities (AAA) J4G44_07225 PF17863 AAA lid domain J4G44_07235 PF11992 Domain of unknown function (DUF3488) J4G44_07235 PF13559 Domain of unknown function (DUF4129) J4G44_07235 PF01841 Transglutaminase-like superfamily J4G44_07255 PF00860 Permease family J4G44_07260 PF00962 Adenosine/AMP deaminase J4G44_07275 PF01351 Ribonuclease HII J4G44_07280 PF02599 Global regulator protein family J4G44_07285 PF01842 ACT domain J4G44_07285 PF13840 ACT domain J4G44_07285 PF00696 Amino acid kinase family J4G44_07290 PF02272 DHHA1 domain J4G44_07290 PF01411 tRNA synthetases class II (A) J4G44_07290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4G44_07295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4G44_07295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4G44_07305 PF13393 Histidyl-tRNA synthetase J4G44_07310 PF00709 Adenylosuccinate synthetase J4G44_07325 PF00248 Aldo/keto reductase family J4G44_07330 PF00027 Cyclic nucleotide-binding domain J4G44_07330 PF13545 Crp-like helix-turn-helix domain J4G44_07335 PF02566 OsmC-like protein J4G44_07340 PF02861 Clp amino terminal domain, pathogenicity island component J4G44_07340 PF10431 C-terminal, D2-small domain, of ClpB protein J4G44_07340 PF07724 AAA domain (Cdc48 subfamily) J4G44_07340 PF00004 ATPase family associated with various cellular activities (AAA) J4G44_07340 PF17871 AAA lid domain J4G44_07350 PF10672 S-adenosylmethionine-dependent methyltransferase J4G44_07350 PF02926 THUMP domain J4G44_07350 PF01170 Putative RNA methylase family UPF0020 J4G44_07360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4G44_07360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4G44_07365 PF01979 Amidohydrolase family J4G44_07370 PF00691 OmpA family J4G44_07370 PF01389 OmpA-like transmembrane domain J4G44_07375 PF01144 Coenzyme A transferase J4G44_07380 PF01144 Coenzyme A transferase J4G44_07385 PF00682 HMGL-like J4G44_07390 PF02785 Biotin carboxylase C-terminal domain J4G44_07390 PF00289 Biotin carboxylase, N-terminal domain J4G44_07390 PF00364 Biotin-requiring enzyme J4G44_07390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G44_07390 PF18140 Propionyl-coenzyme A carboxylase BT domain J4G44_07395 PF00378 Enoyl-CoA hydratase/isomerase J4G44_07400 PF01039 Carboxyl transferase domain J4G44_07405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_07405 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_07405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_07410 PF00440 Bacterial regulatory proteins, tetR family J4G44_07410 PF17925 Tetracyclin repressor-like, C-terminal domain J4G44_07415 PF13193 AMP-binding enzyme C-terminal domain J4G44_07415 PF00501 AMP-binding enzyme J4G44_07420 PF04055 Radical SAM superfamily J4G44_07420 PF06968 Biotin and Thiamin Synthesis associated domain J4G44_07440 PF02390 Putative methyltransferase J4G44_07445 PF01740 STAS domain J4G44_07445 PF00916 Sulfate permease family J4G44_07450 PF00043 Glutathione S-transferase, C-terminal domain J4G44_07450 PF02798 Glutathione S-transferase, N-terminal domain J4G44_07455 PF05690 Thiazole biosynthesis protein ThiG J4G44_07465 PF04241 Protein of unknown function (DUF423) J4G44_07470 PF04545 Sigma-70, region 4 J4G44_07470 PF00140 Sigma-70 factor, region 1.2 J4G44_07470 PF04542 Sigma-70 region 2 J4G44_07480 PF00313 'Cold-shock' DNA-binding domain J4G44_07485 PF00271 Helicase conserved C-terminal domain J4G44_07485 PF00270 DEAD/DEAH box helicase J4G44_07495 PF00881 Nitroreductase family J4G44_07500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4G44_07500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4G44_07520 PF01180 Dihydroorotate dehydrogenase J4G44_07525 PF02674 Colicin V production protein J4G44_07530 PF00156 Phosphoribosyl transferase domain J4G44_07545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G44_07545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G44_07550 PF01435 Peptidase family M48 J4G44_07565 PF09424 Yqey-like protein J4G44_07570 PF01165 Ribosomal protein S21 J4G44_07575 PF00814 Glycoprotease family J4G44_07600 PF03793 PASTA domain J4G44_07600 PF00069 Protein kinase domain J4G44_07630 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4G44_07630 PF00753 Metallo-beta-lactamase superfamily J4G44_07635 PF00155 Aminotransferase class I and II J4G44_07640 PF01641 SelR domain J4G44_07645 PF00255 Glutathione peroxidase J4G44_07650 PF00155 Aminotransferase class I and II J4G44_07655 PF08335 GlnD PII-uridylyltransferase J4G44_07655 PF01966 HD domain J4G44_07655 PF01909 Nucleotidyltransferase domain J4G44_07660 PF02222 ATP-grasp domain J4G44_07665 PF05437 Branched-chain amino acid transport protein (AzlD) J4G44_07670 PF03591 AzlC protein J4G44_07680 PF01926 50S ribosome-binding GTPase J4G44_07680 PF06071 Protein of unknown function (DUF933) J4G44_07700 PF01709 Transcriptional regulator J4G44_07720 PF03848 Tellurite resistance protein TehB J4G44_07720 PF09313 Domain of unknown function (DUF1971) J4G44_07730 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J4G44_07735 PF02277 Phosphoribosyltransferase J4G44_07745 PF02654 Cobalamin-5-phosphate synthase J4G44_07755 PF06968 Biotin and Thiamin Synthesis associated domain J4G44_07755 PF04055 Radical SAM superfamily J4G44_07760 PF08331 Domain of unknown function (DUF1730) J4G44_07765 PF01256 Carbohydrate kinase J4G44_07765 PF03853 YjeF-related protein N-terminus J4G44_07770 PF02075 Crossover junction endodeoxyribonuclease RuvC J4G44_07785 PF01810 LysE type translocator J4G44_07805 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4G44_07805 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4G44_07805 PF02772 S-adenosylmethionine synthetase, central domain J4G44_07810 PF02779 Transketolase, pyrimidine binding domain J4G44_07810 PF02780 Transketolase, C-terminal domain J4G44_07810 PF00456 Transketolase, thiamine diphosphate binding domain J4G44_07825 PF04264 YceI-like domain J4G44_07830 PF00171 Aldehyde dehydrogenase family J4G44_07845 PF00465 Iron-containing alcohol dehydrogenase J4G44_07855 PF14493 Helix-turn-helix domain J4G44_07855 PF05970 PIF1-like helicase J4G44_07860 PF00520 Ion transport protein J4G44_07860 PF00027 Cyclic nucleotide-binding domain J4G44_07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_07865 PF03466 LysR substrate binding domain J4G44_07870 PF07690 Major Facilitator Superfamily J4G44_07875 PF04284 Protein of unknown function (DUF441) J4G44_07880 PF01479 S4 domain J4G44_07880 PF00849 RNA pseudouridylate synthase J4G44_07885 PF13737 Transposase DDE domain J4G44_07900 PF00849 RNA pseudouridylate synthase J4G44_07900 PF01479 S4 domain J4G44_07905 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4G44_07910 PF01119 DNA mismatch repair protein, C-terminal domain J4G44_07910 PF08676 MutL C terminal dimerisation domain J4G44_07920 PF17209 Hfq protein J4G44_07965 PF00639 PPIC-type PPIASE domain J4G44_07965 PF09312 SurA N-terminal domain J4G44_07970 PF04453 LPS transport system D J4G44_07970 PF03968 OstA-like protein J4G44_07975 PF01636 Phosphotransferase enzyme family J4G44_07980 PF00483 Nucleotidyl transferase J4G44_07985 PF02527 rRNA small subunit methyltransferase G J4G44_07990 PF13614 AAA domain J4G44_07995 PF17762 HTH domain found in ParB protein J4G44_07995 PF02195 ParB-like nuclease domain J4G44_08000 PF01618 MotA/TolQ/ExbB proton channel family J4G44_08010 PF00664 ABC transporter transmembrane region J4G44_08010 PF00005 ABC transporter J4G44_08015 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4G44_08020 PF02348 Cytidylyltransferase J4G44_08025 PF09115 DNA polymerase III, delta subunit, C terminal J4G44_08035 PF01026 TatD related DNase J4G44_08045 PF07963 Prokaryotic N-terminal methylation motif J4G44_08050 PF07963 Prokaryotic N-terminal methylation motif J4G44_08050 PF02501 Type II secretion system (T2SS), protein I J4G44_08055 PF07963 Prokaryotic N-terminal methylation motif J4G44_08055 PF11612 Type II secretion system (T2SS), protein J J4G44_08060 PF03934 Type II secretion system (T2SS), protein K J4G44_08070 PF03167 Uracil DNA glycosylase superfamily J4G44_08080 PF14437 MafB19-like deaminase J4G44_08090 PF02224 Cytidylate kinase J4G44_08095 PF00575 S1 RNA binding domain J4G44_08100 PF00216 Bacterial DNA-binding protein J4G44_08110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4G44_08115 PF03956 Lysine exporter LysO J4G44_08120 PF00743 Flavin-binding monooxygenase-like J4G44_08125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G44_08125 PF12833 Helix-turn-helix domain J4G44_08130 PF03969 AFG1-like ATPase J4G44_08135 PF01274 Malate synthase J4G44_08140 PF00171 Aldehyde dehydrogenase family J4G44_08155 PF03741 Integral membrane protein TerC family J4G44_08155 PF03471 Transporter associated domain J4G44_08175 PF05525 Branched-chain amino acid transport protein J4G44_08180 PF00557 Metallopeptidase family M24 J4G44_08185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_08185 PF03466 LysR substrate binding domain J4G44_08190 PF13291 ACT domain J4G44_08190 PF04607 Region found in RelA / SpoT proteins J4G44_08190 PF02824 TGS domain J4G44_08200 PF02954 Bacterial regulatory protein, Fis family J4G44_08200 PF00072 Response regulator receiver domain J4G44_08200 PF00158 Sigma-54 interaction domain J4G44_08205 PF00989 PAS fold J4G44_08205 PF00512 His Kinase A (phospho-acceptor) domain J4G44_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_08210 PF18693 TRAM domain J4G44_08210 PF00919 Uncharacterized protein family UPF0004 J4G44_08210 PF04055 Radical SAM superfamily J4G44_08215 PF00696 Amino acid kinase family J4G44_08220 PF01765 Ribosome recycling factor J4G44_08225 PF01255 Putative undecaprenyl diphosphate synthase J4G44_08235 PF13288 DXP reductoisomerase C-terminal domain J4G44_08235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4G44_08235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4G44_08240 PF13180 PDZ domain J4G44_08240 PF17820 PDZ domain J4G44_08240 PF02163 Peptidase family M50 J4G44_08245 PF01103 Surface antigen J4G44_08245 PF07244 Surface antigen variable number repeat J4G44_08255 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_08255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4G44_08260 PF07977 FabA-like domain J4G44_08265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4G44_08265 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_08280 PF02631 RecX family J4G44_08285 PF00154 recA bacterial DNA recombination protein J4G44_08290 PF01479 S4 domain J4G44_08295 PF13419 Haloacid dehalogenase-like hydrolase J4G44_08310 PF00459 Inositol monophosphatase family J4G44_08320 PF00041 Fibronectin type III domain J4G44_08320 PF12561 ToxR activated gene A lipoprotein domain J4G44_08325 PF01649 Ribosomal protein S20 J4G44_08330 PF13460 NAD(P)H-binding J4G44_08335 PF03737 Aldolase/RraA J4G44_08350 PF02559 CarD-like/TRCF domain J4G44_08350 PF00270 DEAD/DEAH box helicase J4G44_08350 PF03461 TRCF domain J4G44_08350 PF17757 UvrB interaction domain J4G44_08350 PF00271 Helicase conserved C-terminal domain J4G44_08360 PF00211 Adenylate and Guanylate cyclase catalytic domain J4G44_08365 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G44_08370 PF00012 Hsp70 protein J4G44_08375 PF07743 HSCB C-terminal oligomerisation domain J4G44_08375 PF00226 DnaJ domain J4G44_08380 PF01521 Iron-sulphur cluster biosynthesis J4G44_08385 PF01592 NifU-like N terminal domain J4G44_08390 PF00266 Aminotransferase class-V J4G44_08395 PF02082 Transcriptional regulator J4G44_08410 PF00216 Bacterial DNA-binding protein J4G44_08415 PF09312 SurA N-terminal domain J4G44_08435 PF00267 Gram-negative porin J4G44_08440 PF01230 HIT domain J4G44_08450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4G44_08450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4G44_08460 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G44_08465 PF02575 YbaB/EbfC DNA-binding family J4G44_08470 PF13662 Toprim domain J4G44_08470 PF02132 RecR protein J4G44_08475 PF01612 3'-5' exonuclease J4G44_08475 PF00570 HRDC domain J4G44_08480 PF05166 YcgL domain J4G44_08490 PF00004 ATPase family associated with various cellular activities (AAA) J4G44_08490 PF17862 AAA+ lid domain J4G44_08490 PF01434 Peptidase family M41 J4G44_08500 PF00291 Pyridoxal-phosphate dependent enzyme J4G44_08505 PF00571 CBS domain J4G44_08535 PF05193 Peptidase M16 inactive domain J4G44_08535 PF00675 Insulinase (Peptidase family M16) J4G44_08540 PF02881 SRP54-type protein, helical bundle domain J4G44_08540 PF00448 SRP54-type protein, GTPase domain J4G44_08590 PF02690 Na+/Pi-cotransporter J4G44_08595 PF04073 Aminoacyl-tRNA editing domain J4G44_08610 PF04143 Sulphur transport J4G44_08620 PF00753 Metallo-beta-lactamase superfamily J4G44_08625 PF12697 Alpha/beta hydrolase family J4G44_08630 PF00289 Biotin carboxylase, N-terminal domain J4G44_08630 PF02785 Biotin carboxylase C-terminal domain J4G44_08630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G44_08635 PF00364 Biotin-requiring enzyme J4G44_08640 PF01220 Dehydroquinase class II J4G44_08645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_08645 PF00512 His Kinase A (phospho-acceptor) domain J4G44_08645 PF08521 Two-component sensor kinase N-terminal J4G44_08650 PF00072 Response regulator receiver domain J4G44_08650 PF00486 Transcriptional regulatory protein, C terminal J4G44_08655 PF11412 Disulphide bond corrector protein DsbC J4G44_08655 PF02683 Cytochrome C biogenesis protein transmembrane region J4G44_08660 PF08534 Redoxin J4G44_08665 PF13098 Thioredoxin-like domain J4G44_08675 PF02627 Carboxymuconolactone decarboxylase family J4G44_08680 PF18381 YcaO cyclodehydratase C-terminal domain J4G44_08680 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J4G44_08690 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system J4G44_08695 PF13438 Domain of unknown function (DUF4113) J4G44_08695 PF00817 impB/mucB/samB family J4G44_08695 PF11799 impB/mucB/samB family C-terminal domain J4G44_08695 PF11798 IMS family HHH motif J4G44_08700 PF00717 Peptidase S24-like J4G44_08710 PF01636 Phosphotransferase enzyme family J4G44_08725 PF00005 ABC transporter J4G44_08725 PF00664 ABC transporter transmembrane region J4G44_08730 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G44_08730 PF12833 Helix-turn-helix domain J4G44_08735 PF01597 Glycine cleavage H-protein J4G44_08740 PF07690 Major Facilitator Superfamily J4G44_08745 PF00793 DAHP synthetase I family J4G44_08750 PF00107 Zinc-binding dehydrogenase J4G44_08750 PF08240 Alcohol dehydrogenase GroES-like domain J4G44_08755 PF13091 PLD-like domain J4G44_08780 PF00106 short chain dehydrogenase J4G44_08795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_08795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_08795 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_08800 PF03466 LysR substrate binding domain J4G44_08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_08820 PF00206 Lyase J4G44_08820 PF10415 Fumarase C C-terminus J4G44_08825 PF16363 GDP-mannose 4,6 dehydratase J4G44_08830 PF02635 DsrE/DsrF-like family J4G44_08850 PF01638 HxlR-like helix-turn-helix J4G44_08875 PF00155 Aminotransferase class I and II J4G44_08875 PF00392 Bacterial regulatory proteins, gntR family J4G44_08885 PF07690 Major Facilitator Superfamily J4G44_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_08890 PF03466 LysR substrate binding domain J4G44_08895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4G44_08895 PF13378 Enolase C-terminal domain-like J4G44_08900 PF02426 Muconolactone delta-isomerase J4G44_08905 PF04444 Catechol dioxygenase N terminus J4G44_08905 PF00775 Dioxygenase J4G44_08910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4G44_08910 PF00355 Rieske [2Fe-2S] domain J4G44_08915 PF00866 Ring hydroxylating beta subunit J4G44_08920 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G44_08920 PF00175 Oxidoreductase NAD-binding domain J4G44_08920 PF00970 Oxidoreductase FAD-binding domain J4G44_08925 PF00106 short chain dehydrogenase J4G44_08930 PF03594 Benzoate membrane transport protein J4G44_08935 PF01144 Coenzyme A transferase J4G44_08940 PF01144 Coenzyme A transferase J4G44_08945 PF02803 Thiolase, C-terminal domain J4G44_08945 PF00108 Thiolase, N-terminal domain J4G44_08950 PF12146 Serine aminopeptidase, S33 J4G44_08955 PF00108 Thiolase, N-terminal domain J4G44_08955 PF02803 Thiolase, C-terminal domain J4G44_08960 PF00440 Bacterial regulatory proteins, tetR family J4G44_08960 PF08360 QacR-like protein, C-terminal region J4G44_08965 PF00291 Pyridoxal-phosphate dependent enzyme J4G44_08970 PF01553 Acyltransferase J4G44_08980 PF00916 Sulfate permease family J4G44_08980 PF01740 STAS domain J4G44_08985 PF00375 Sodium:dicarboxylate symporter family J4G44_08990 PF06912 Protein of unknown function (DUF1275) J4G44_08995 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J4G44_09000 PF00924 Mechanosensitive ion channel J4G44_09010 PF00990 Diguanylate cyclase, GGDEF domain J4G44_09010 PF17151 Periplasmic sensor domain J4G44_09015 PF01425 Amidase J4G44_09020 PF12832 MFS_1 like family J4G44_09070 PF02464 Competence-damaged protein J4G44_09070 PF00994 Probable molybdopterin binding domain J4G44_09070 PF18146 Damage-inducible protein CinA KH domain J4G44_09085 PF00285 Citrate synthase, C-terminal domain J4G44_09095 PF00440 Bacterial regulatory proteins, tetR family J4G44_09100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4G44_09100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4G44_09110 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J4G44_09115 PF00004 ATPase family associated with various cellular activities (AAA) J4G44_09115 PF07724 AAA domain (Cdc48 subfamily) J4G44_09115 PF10431 C-terminal, D2-small domain, of ClpB protein J4G44_09115 PF17871 AAA lid domain J4G44_09115 PF02861 Clp amino terminal domain, pathogenicity island component J4G44_09120 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4G44_09130 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4G44_09130 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G44_09140 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4G44_09145 PF00585 C-terminal regulatory domain of Threonine dehydratase J4G44_09145 PF00291 Pyridoxal-phosphate dependent enzyme J4G44_09150 PF02080 TrkA-C domain J4G44_09150 PF02254 TrkA-N domain J4G44_09155 PF02386 Cation transport protein J4G44_09160 PF02253 Phospholipase A1 J4G44_09165 PF00675 Insulinase (Peptidase family M16) J4G44_09165 PF08367 Peptidase M16C associated J4G44_09165 PF05193 Peptidase M16 inactive domain J4G44_09175 PF00294 pfkB family carbohydrate kinase J4G44_09185 PF07290 Protein of unknown function (DUF1449) J4G44_09195 PF01654 Cytochrome bd terminal oxidase subunit I J4G44_09200 PF02322 Cytochrome bd terminal oxidase subunit II J4G44_09205 PF08173 Membrane bound YbgT-like protein J4G44_09215 PF01264 Chorismate synthase J4G44_09220 PF05175 Methyltransferase small domain J4G44_09235 PF03109 ABC1 family J4G44_09240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_09240 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_09240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_09245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_09245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_09245 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_09250 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J4G44_09260 PF00487 Fatty acid desaturase J4G44_09265 PF12852 Cupin J4G44_09265 PF12833 Helix-turn-helix domain J4G44_09270 PF02684 Lipid-A-disaccharide synthetase J4G44_09275 PF01925 Sulfite exporter TauE/SafE J4G44_09280 PF00793 DAHP synthetase I family J4G44_09290 PF02542 YgbB family J4G44_09305 PF01098 Cell cycle protein J4G44_09310 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4G44_09315 PF04977 Septum formation initiator J4G44_09320 PF00113 Enolase, C-terminal TIM barrel domain J4G44_09320 PF03952 Enolase, N-terminal domain J4G44_09325 PF00793 DAHP synthetase I family J4G44_09330 PF06418 CTP synthase N-terminus J4G44_09330 PF00117 Glutamine amidotransferase class-I J4G44_09350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G44_09350 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_09360 PF12697 Alpha/beta hydrolase family J4G44_09365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_09365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_09365 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_09370 PF02146 Sir2 family J4G44_09375 PF05958 tRNA (Uracil-5-)-methyltransferase J4G44_09400 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G44_09400 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4G44_09405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4G44_09410 PF00149 Calcineurin-like phosphoesterase J4G44_09415 PF03328 HpcH/HpaI aldolase/citrate lyase family J4G44_09420 PF00881 Nitroreductase family J4G44_09435 PF01116 Fructose-bisphosphate aldolase class-II J4G44_09445 PF00162 Phosphoglycerate kinase J4G44_09455 PF02545 Maf-like protein J4G44_09480 PF08007 Cupin superfamily protein J4G44_09485 PF13492 GAF domain J4G44_09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_09485 PF07730 Histidine kinase J4G44_09490 PF00196 Bacterial regulatory proteins, luxR family J4G44_09490 PF00072 Response regulator receiver domain J4G44_09505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4G44_09505 PF01565 FAD binding domain J4G44_09510 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4G44_09515 PF00465 Iron-containing alcohol dehydrogenase J4G44_09520 PF03061 Thioesterase superfamily J4G44_09525 PF12170 DNA polymerase III tau subunit V interacting with alpha J4G44_09525 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J4G44_09525 PF12169 DNA polymerase III subunits gamma and tau domain III J4G44_09530 PF00144 Beta-lactamase J4G44_09545 PF02803 Thiolase, C-terminal domain J4G44_09545 PF00108 Thiolase, N-terminal domain J4G44_09555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_09555 PF03466 LysR substrate binding domain J4G44_09560 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4G44_09565 PF01810 LysE type translocator J4G44_09570 PF03594 Benzoate membrane transport protein J4G44_09580 PF00582 Universal stress protein family J4G44_09585 PF00582 Universal stress protein family J4G44_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_09595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G44_09600 PF01433 Peptidase family M1 domain J4G44_09600 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4G44_09600 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4G44_09615 PF00330 Aconitase family (aconitate hydratase) J4G44_09615 PF06434 Aconitate hydratase 2 N-terminus J4G44_09615 PF11791 Aconitate B N-terminal domain J4G44_09635 PF17243 POTRA domain TamA domain 1 J4G44_09635 PF01103 Surface antigen J4G44_09635 PF07244 Surface antigen variable number repeat J4G44_09640 PF07690 Major Facilitator Superfamily J4G44_09645 PF03232 Ubiquinone biosynthesis protein COQ7 J4G44_09655 PF02152 Dihydroneopterin aldolase J4G44_09660 PF03109 ABC1 family J4G44_09665 PF00899 ThiF family J4G44_09675 PF13193 AMP-binding enzyme C-terminal domain J4G44_09675 PF00501 AMP-binding enzyme J4G44_09680 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_09680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_09680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_09685 PF00106 short chain dehydrogenase J4G44_09700 PF01062 Bestrophin, RFP-TM, chloride channel J4G44_09705 PF13847 Methyltransferase domain J4G44_09705 PF17827 PrmC N-terminal domain J4G44_09710 PF03462 PCRF domain J4G44_09710 PF00472 RF-1 domain J4G44_09725 PF00296 Luciferase-like monooxygenase J4G44_09735 PF03618 Kinase/pyrophosphorylase J4G44_09740 PF02896 PEP-utilising enzyme, TIM barrel domain J4G44_09740 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4G44_09740 PF00391 PEP-utilising enzyme, mobile domain J4G44_09750 PF06481 COX Aromatic Rich Motif J4G44_09750 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4G44_09755 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4G44_09760 PF00510 Cytochrome c oxidase subunit III J4G44_09765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4G44_09770 PF01040 UbiA prenyltransferase family J4G44_09775 PF01250 Ribosomal protein S6 J4G44_09780 PF01084 Ribosomal protein S18 J4G44_09785 PF03948 Ribosomal protein L9, C-terminal domain J4G44_09785 PF01281 Ribosomal protein L9, N-terminal domain J4G44_09790 PF00772 DnaB-like helicase N terminal domain J4G44_09790 PF03796 DnaB-like helicase C terminal domain J4G44_09800 PF00842 Alanine racemase, C-terminal domain J4G44_09800 PF01168 Alanine racemase, N-terminal domain J4G44_09805 PF00106 short chain dehydrogenase J4G44_09820 PF00108 Thiolase, N-terminal domain J4G44_09820 PF02803 Thiolase, C-terminal domain J4G44_09835 PF01134 Glucose inhibited division protein A J4G44_09835 PF13932 GidA associated domain J4G44_09865 PF02954 Bacterial regulatory protein, Fis family J4G44_09870 PF01808 AICARFT/IMPCHase bienzyme J4G44_09870 PF02142 MGS-like domain J4G44_09875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4G44_09875 PF02843 Phosphoribosylglycinamide synthetase, C domain J4G44_09875 PF02844 Phosphoribosylglycinamide synthetase, N domain J4G44_09880 PF03180 NLPA lipoprotein J4G44_09885 PF09383 NIL domain J4G44_09885 PF00005 ABC transporter J4G44_09890 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_09895 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4G44_09895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4G44_09895 PF14579 Helix-hairpin-helix motif J4G44_09895 PF01336 OB-fold nucleic acid binding domain J4G44_09895 PF02811 PHP domain J4G44_09900 PF00588 SpoU rRNA Methylase family J4G44_09905 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_09930 PF00581 Rhodanese-like domain J4G44_09950 PF00488 MutS domain V J4G44_09950 PF05190 MutS family domain IV J4G44_09950 PF05192 MutS domain III J4G44_09950 PF05188 MutS domain II J4G44_09950 PF01624 MutS domain I J4G44_09955 PF00037 4Fe-4S binding domain J4G44_09955 PF11953 Domain of unknown function (DUF3470) J4G44_09965 PF01596 O-methyltransferase J4G44_09980 PF01205 Uncharacterized protein family UPF0029 J4G44_09985 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4G44_09985 PF00005 ABC transporter J4G44_09990 PF03968 OstA-like protein J4G44_10005 PF00571 CBS domain J4G44_10005 PF01380 SIS domain J4G44_10015 PF09190 DALR domain J4G44_10015 PF01406 tRNA synthetases class I (C) catalytic domain J4G44_10020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4G44_10020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4G44_10025 PF00270 DEAD/DEAH box helicase J4G44_10025 PF11898 Domain of unknown function (DUF3418) J4G44_10025 PF04408 Helicase associated domain (HA2) J4G44_10025 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4G44_10025 PF00271 Helicase conserved C-terminal domain J4G44_10030 PF00578 AhpC/TSA family J4G44_10030 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G44_10060 PF03060 Nitronate monooxygenase J4G44_10065 PF01207 Dihydrouridine synthase (Dus) J4G44_10070 PF07759 Protein of unknown function (DUF1615) J4G44_10080 PF00487 Fatty acid desaturase J4G44_10085 PF00970 Oxidoreductase FAD-binding domain J4G44_10085 PF00175 Oxidoreductase NAD-binding domain J4G44_10085 PF00042 Globin J4G44_10090 PF00440 Bacterial regulatory proteins, tetR family J4G44_10100 PF18337 RapA N-terminal Tudor like domain J4G44_10100 PF00176 SNF2 family N-terminal domain J4G44_10100 PF12137 RNA polymerase recycling family C-terminal J4G44_10100 PF00271 Helicase conserved C-terminal domain J4G44_10100 PF18339 RapA N-terminal Tudor like domain 1 J4G44_10105 PF00849 RNA pseudouridylate synthase J4G44_10110 PF00202 Aminotransferase class-III J4G44_10115 PF02581 Thiamine monophosphate synthase J4G44_10150 PF05193 Peptidase M16 inactive domain J4G44_10150 PF00675 Insulinase (Peptidase family M16) J4G44_10155 PF02567 Phenazine biosynthesis-like protein J4G44_10160 PF00849 RNA pseudouridylate synthase J4G44_10170 PF07943 Penicillin-binding protein 5, C-terminal domain J4G44_10170 PF00768 D-alanyl-D-alanine carboxypeptidase J4G44_10175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G44_10180 PF03441 FAD binding domain of DNA photolyase J4G44_10180 PF00875 DNA photolyase J4G44_10185 PF03883 Peroxide stress protein YaaA J4G44_10200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4G44_10205 PF00155 Aminotransferase class I and II J4G44_10210 PF01842 ACT domain J4G44_10210 PF01817 Chorismate mutase type II J4G44_10210 PF00800 Prephenate dehydratase J4G44_10215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G44_10215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G44_10215 PF02770 Acyl-CoA dehydrogenase, middle domain J4G44_10220 PF02885 Glycosyl transferase family, helical bundle domain J4G44_10220 PF00591 Glycosyl transferase family, a/b domain J4G44_10225 PF07023 Protein of unknown function (DUF1315) J4G44_10230 PF01513 ATP-NAD kinase J4G44_10235 PF00912 Transglycosylase J4G44_10235 PF00905 Penicillin binding protein transpeptidase domain J4G44_10235 PF14814 Bifunctional transglycosylase second domain J4G44_10245 PF02581 Thiamine monophosphate synthase J4G44_10255 PF08521 Two-component sensor kinase N-terminal J4G44_10255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_10255 PF00512 His Kinase A (phospho-acceptor) domain J4G44_10260 PF00072 Response regulator receiver domain J4G44_10260 PF00486 Transcriptional regulatory protein, C terminal J4G44_10270 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4G44_10270 PF00437 Type II/IV secretion system protein J4G44_10280 PF18389 TrmO C-terminal domain J4G44_10280 PF01980 tRNA-methyltransferase O J4G44_10285 PF00175 Oxidoreductase NAD-binding domain J4G44_10285 PF00970 Oxidoreductase FAD-binding domain J4G44_10305 PF13411 MerR HTH family regulatory protein J4G44_10310 PF03358 NADPH-dependent FMN reductase J4G44_10315 PF01758 Sodium Bile acid symporter family J4G44_10320 PF01022 Bacterial regulatory protein, arsR family J4G44_10325 PF03960 ArsC family J4G44_10330 PF01136 Peptidase family U32 J4G44_10330 PF16325 Peptidase family U32 C-terminal domain J4G44_10335 PF00037 4Fe-4S binding domain J4G44_10340 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_10340 PF13192 Thioredoxin domain J4G44_10350 PF05816 Toxic anion resistance protein (TelA) J4G44_10360 PF03449 Transcription elongation factor, N-terminal J4G44_10360 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G44_10365 PF00464 Serine hydroxymethyltransferase J4G44_10400 PF02661 Fic/DOC family J4G44_10400 PF13784 Fic/DOC family N-terminal J4G44_10420 PF00004 ATPase family associated with various cellular activities (AAA) J4G44_10420 PF16450 Proteasomal ATPase OB C-terminal domain J4G44_10420 PF17758 Proteasomal ATPase OB N-terminal domain J4G44_10640 PF09588 YqaJ-like viral recombinase domain J4G44_10670 PF13356 Arm DNA-binding domain J4G44_10670 PF00589 Phage integrase family J4G44_10680 PF00005 ABC transporter J4G44_10685 PF01061 ABC-2 type transporter J4G44_10690 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4G44_10690 PF14489 QueF-like protein J4G44_10700 PF13406 Transglycosylase SLT domain J4G44_10705 PF03330 Lytic transglycolase J4G44_10705 PF05036 Sporulation related domain J4G44_10720 PF00889 Elongation factor TS J4G44_10725 PF00318 Ribosomal protein S2 J4G44_10730 PF00557 Metallopeptidase family M24 J4G44_10750 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_10750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G44_10755 PF04055 Radical SAM superfamily J4G44_10770 PF08238 Sel1 repeat J4G44_10780 PF05221 S-adenosyl-L-homocysteine hydrolase J4G44_10780 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J4G44_10785 PF02219 Methylenetetrahydrofolate reductase J4G44_10790 PF04452 RNA methyltransferase J4G44_10795 PF03707 Bacterial signalling protein N terminal repeat J4G44_10795 PF00990 Diguanylate cyclase, GGDEF domain J4G44_10795 PF00563 EAL domain J4G44_10800 PF00390 Malic enzyme, N-terminal domain J4G44_10800 PF03949 Malic enzyme, NAD binding domain J4G44_10800 PF01515 Phosphate acetyl/butaryl transferase J4G44_10805 PF01743 Poly A polymerase head domain J4G44_10805 PF12627 Probable RNA and SrmB- binding site of polymerase A J4G44_10810 PF00152 tRNA synthetases class II (D, K and N) J4G44_10815 PF11890 Domain of unknown function (DUF3410) J4G44_10815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G44_10815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G44_10820 PF02769 AIR synthase related protein, C-terminal domain J4G44_10820 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4G44_10820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4G44_10825 PF00691 OmpA family J4G44_10825 PF13488 Glycine zipper J4G44_10850 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_10850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G44_10855 PF00764 Arginosuccinate synthase J4G44_10860 PF01590 GAF domain J4G44_10860 PF00563 EAL domain J4G44_10860 PF00990 Diguanylate cyclase, GGDEF domain J4G44_10860 PF00360 Phytochrome region J4G44_10865 PF01979 Amidohydrolase family J4G44_10870 PF00929 Exonuclease J4G44_10885 PF00324 Amino acid permease J4G44_10910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G44_10910 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_10915 PF00005 ABC transporter J4G44_10915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4G44_10920 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_10920 PF12911 N-terminal TM domain of oligopeptide transport permease C J4G44_10925 PF00528 Binding-protein-dependent transport system inner membrane component J4G44_10930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4G44_10935 PF01476 LysM domain J4G44_10935 PF01476 LysM domain J4G44_10935 PF01464 Transglycosylase SLT domain J4G44_10935 PF01464 Transglycosylase SLT domain J4G44_10940 PF00929 Exonuclease J4G44_10950 PF00293 NUDIX domain J4G44_10950 PF09297 NADH pyrophosphatase zinc ribbon domain J4G44_10955 PF00135 Carboxylesterase family J4G44_10960 PF04972 BON domain J4G44_10965 PF02021 Uncharacterised protein family UPF0102 J4G44_10970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4G44_10980 PF01494 FAD binding domain J4G44_10985 PF01494 FAD binding domain J4G44_10990 PF04221 RelB antitoxin J4G44_11000 PF05195 Aminopeptidase P, N-terminal domain J4G44_11000 PF00557 Metallopeptidase family M24 J4G44_11005 PF03695 Uncharacterised protein family (UPF0149) J4G44_11030 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system J4G44_11035 PF01613 Flavin reductase like domain J4G44_11040 PF01717 Cobalamin-independent synthase, Catalytic domain J4G44_11055 PF00403 Heavy-metal-associated domain J4G44_11060 PF00376 MerR family regulatory protein J4G44_11060 PF09278 MerR, DNA binding J4G44_11070 PF01594 AI-2E family transporter J4G44_11075 PF16736 Single Cache-like J4G44_11075 PF00512 His Kinase A (phospho-acceptor) domain J4G44_11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_11075 PF00989 PAS fold J4G44_11080 PF13817 IS66 C-terminal element J4G44_11080 PF13007 Transposase C of IS166 homeodomain J4G44_11080 PF13005 zinc-finger binding domain of transposase IS66 J4G44_11080 PF03050 Transposase IS66 family J4G44_11100 PF08521 Two-component sensor kinase N-terminal J4G44_11100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_11100 PF00512 His Kinase A (phospho-acceptor) domain J4G44_11110 PF01219 Prokaryotic diacylglycerol kinase J4G44_11120 PF07694 5TMR of 5TMR-LYT J4G44_11120 PF00990 Diguanylate cyclase, GGDEF domain J4G44_11130 PF03466 LysR substrate binding domain J4G44_11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_11135 PF09330 D-lactate dehydrogenase, membrane binding J4G44_11135 PF01565 FAD binding domain J4G44_11140 PF01070 FMN-dependent dehydrogenase J4G44_11145 PF00392 Bacterial regulatory proteins, gntR family J4G44_11145 PF07729 FCD domain J4G44_11150 PF02652 L-lactate permease J4G44_11165 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4G44_11170 PF00004 ATPase family associated with various cellular activities (AAA) J4G44_11170 PF05362 Lon protease (S16) C-terminal proteolytic domain J4G44_11170 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4G44_11175 PF04389 Peptidase family M28 J4G44_11180 PF02590 Predicted SPOUT methyltransferase J4G44_11185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4G44_11195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4G44_11195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4G44_11200 PF04060 Putative Fe-S cluster J4G44_11205 PF10576 Iron-sulfur binding domain of endonuclease III J4G44_11205 PF00633 Helix-hairpin-helix motif J4G44_11205 PF00730 HhH-GPD superfamily base excision DNA repair protein J4G44_11220 PF05191 Adenylate kinase, active site lid J4G44_11235 PF03717 Penicillin-binding Protein dimerisation domain J4G44_11235 PF00905 Penicillin binding protein transpeptidase domain J4G44_11245 PF00444 Ribosomal protein L36 J4G44_11250 PF01553 Acyltransferase J4G44_11260 PF00463 Isocitrate lyase family J4G44_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_11265 PF03466 LysR substrate binding domain J4G44_11270 PF03471 Transporter associated domain J4G44_11270 PF01595 Cyclin M transmembrane N-terminal domain J4G44_11270 PF00571 CBS domain J4G44_11285 PF08240 Alcohol dehydrogenase GroES-like domain J4G44_11285 PF00107 Zinc-binding dehydrogenase J4G44_11290 PF00085 Thioredoxin J4G44_11295 PF00990 Diguanylate cyclase, GGDEF domain J4G44_11300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G44_11305 PF07152 YaeQ protein J4G44_11310 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4G44_11310 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4G44_11320 PF03061 Thioesterase superfamily J4G44_11330 PF01734 Patatin-like phospholipase J4G44_11340 PF00665 Integrase core domain J4G44_11340 PF13936 Helix-turn-helix domain J4G44_11350 PF03616 Sodium/glutamate symporter J4G44_11360 PF07690 Major Facilitator Superfamily J4G44_11365 PF12805 FUSC-like inner membrane protein yccS J4G44_11375 PF00258 Flavodoxin J4G44_11375 PF00175 Oxidoreductase NAD-binding domain J4G44_11375 PF00667 FAD binding domain J4G44_11435 PF04304 Protein of unknown function (DUF454) J4G44_11445 PF08085 Entericidin EcnA/B family J4G44_11450 PF07687 Peptidase dimerisation domain J4G44_11450 PF01546 Peptidase family M20/M25/M40 J4G44_11460 PF01584 CheW-like domain J4G44_11460 PF02895 Signal transducing histidine kinase, homodimeric domain J4G44_11460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_11460 PF07194 P2 response regulator binding domain J4G44_11460 PF01584 CheW-like domain J4G44_11460 PF02895 Signal transducing histidine kinase, homodimeric domain J4G44_11460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_11460 PF01627 Hpt domain J4G44_11460 PF07194 P2 response regulator binding domain J4G44_11460 PF01627 Hpt domain J4G44_11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4G44_11465 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4G44_11470 PF01584 CheW-like domain J4G44_11475 PF00072 Response regulator receiver domain J4G44_11480 PF00072 Response regulator receiver domain J4G44_11490 PF13533 Biotin-lipoyl like J4G44_11495 PF00873 AcrB/AcrD/AcrF family J4G44_11500 PF04073 Aminoacyl-tRNA editing domain J4G44_11500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G44_11500 PF03129 Anticodon binding domain J4G44_11525 PF00692 dUTPase J4G44_11535 PF10609 NUBPL iron-transfer P-loop NTPase J4G44_11540 PF09334 tRNA synthetases class I (M) J4G44_11540 PF01588 Putative tRNA binding domain J4G44_11550 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4G44_11550 PF00753 Metallo-beta-lactamase superfamily J4G44_11565 PF00291 Pyridoxal-phosphate dependent enzyme J4G44_11590 PF05552 Conserved TM helix J4G44_11610 PF00175 Oxidoreductase NAD-binding domain J4G44_11610 PF00970 Oxidoreductase FAD-binding domain J4G44_11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_11615 PF03466 LysR substrate binding domain J4G44_11620 PF00313 'Cold-shock' DNA-binding domain J4G44_11625 PF00313 'Cold-shock' DNA-binding domain J4G44_11635 PF00361 Proton-conducting membrane transporter J4G44_11640 PF00361 Proton-conducting membrane transporter J4G44_11645 PF00361 Proton-conducting membrane transporter J4G44_11645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4G44_11650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4G44_11655 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J4G44_11660 PF12838 4Fe-4S dicluster domain J4G44_11665 PF00146 NADH dehydrogenase J4G44_11670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4G44_11670 PF00384 Molybdopterin oxidoreductase J4G44_11670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4G44_11675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4G44_11675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J4G44_11675 PF10531 SLBB domain J4G44_11685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J4G44_11685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J4G44_11690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J4G44_11695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J4G44_11705 PF00348 Polyprenyl synthetase J4G44_11710 PF04303 PrpF protein J4G44_11715 PF00324 Amino acid permease J4G44_11720 PF12857 TOBE-like domain J4G44_11720 PF17850 CysA C-terminal regulatory domain J4G44_11720 PF00005 ABC transporter J4G44_11750 PF01507 Phosphoadenosine phosphosulfate reductase family J4G44_11755 PF06974 Protein of unknown function (DUF1298) J4G44_11755 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain J4G44_11765 PF00575 S1 RNA binding domain J4G44_11765 PF10150 Ribonuclease E/G family J4G44_11770 PF02545 Maf-like protein J4G44_11775 PF04093 rod shape-determining protein MreD J4G44_11780 PF04085 rod shape-determining protein MreC J4G44_11790 PF02686 Glu-tRNAGln amidotransferase C subunit J4G44_11795 PF01425 Amidase J4G44_11800 PF02934 GatB/GatE catalytic domain J4G44_11800 PF02637 GatB domain J4G44_11820 PF05992 SbmA/BacA-like family J4G44_11835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4G44_11835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4G44_11860 PF00005 ABC transporter J4G44_11860 PF02687 FtsX-like permease family J4G44_11860 PF12704 MacB-like periplasmic core domain J4G44_11870 PF01925 Sulfite exporter TauE/SafE J4G44_11875 PF00753 Metallo-beta-lactamase superfamily J4G44_11880 PF02954 Bacterial regulatory protein, Fis family J4G44_11880 PF00158 Sigma-54 interaction domain J4G44_11880 PF13185 GAF domain J4G44_11895 PF00501 AMP-binding enzyme J4G44_11905 PF03061 Thioesterase superfamily J4G44_11910 PF00490 Delta-aminolevulinic acid dehydratase J4G44_11915 PF01266 FAD dependent oxidoreductase J4G44_11920 PF08338 Domain of unknown function (DUF1731) J4G44_11920 PF01370 NAD dependent epimerase/dehydratase family J4G44_11930 PF12320 Type 5 capsule protein repressor C-terminal domain J4G44_11930 PF00149 Calcineurin-like phosphoesterase J4G44_11945 PF01168 Alanine racemase, N-terminal domain J4G44_11950 PF00437 Type II/IV secretion system protein J4G44_11955 PF00437 Type II/IV secretion system protein J4G44_11960 PF01475 Ferric uptake regulator family J4G44_11965 PF04355 SmpA / OmlA family J4G44_11970 PF03658 RnfH family Ubiquitin J4G44_11980 PF01814 Hemerythrin HHE cation binding domain J4G44_11990 PF13230 Glutamine amidotransferases class-II J4G44_12000 PF00696 Amino acid kinase family J4G44_12005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G44_12005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G44_12005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G44_12005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G44_12010 PF00692 dUTPase J4G44_12015 PF00580 UvrD/REP helicase N-terminal domain J4G44_12015 PF13361 UvrD-like helicase C-terminal domain J4G44_12020 PF00691 OmpA family J4G44_12020 PF13488 Glycine zipper J4G44_12025 PF01553 Acyltransferase J4G44_12035 PF03775 Septum formation inhibitor MinC, C-terminal domain J4G44_12040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4G44_12045 PF03776 Septum formation topological specificity factor MinE J4G44_12055 PF09397 Ftsk gamma domain J4G44_12055 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4G44_12055 PF01580 FtsK/SpoIIIE family J4G44_12055 PF17854 FtsK alpha domain J4G44_12060 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G44_12065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4G44_12070 PF04376 Arginine-tRNA-protein transferase, N terminus J4G44_12070 PF04377 Arginine-tRNA-protein transferase, C terminus J4G44_12075 PF00583 Acetyltransferase (GNAT) family J4G44_12085 PF03143 Elongation factor Tu C-terminal domain J4G44_12085 PF03144 Elongation factor Tu domain 2 J4G44_12085 PF00009 Elongation factor Tu GTP binding domain J4G44_12090 PF14492 Elongation Factor G, domain II J4G44_12090 PF03764 Elongation factor G, domain IV J4G44_12090 PF00009 Elongation factor Tu GTP binding domain J4G44_12090 PF03144 Elongation factor Tu domain 2 J4G44_12090 PF00679 Elongation factor G C-terminus J4G44_12095 PF00177 Ribosomal protein S7p/S5e J4G44_12100 PF00164 Ribosomal protein S12/S23 J4G44_12110 PF02801 Beta-ketoacyl synthase, C-terminal domain J4G44_12110 PF00109 Beta-ketoacyl synthase, N-terminal domain J4G44_12115 PF03653 Uncharacterised protein family (UPF0093) J4G44_12125 PF13419 Haloacid dehalogenase-like hydrolase J4G44_12130 PF02581 Thiamine monophosphate synthase J4G44_12130 PF08543 Phosphomethylpyrimidine kinase J4G44_12135 PF08378 Nuclease-related domain J4G44_12140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4G44_12140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4G44_12145 PF00893 Small Multidrug Resistance protein J4G44_12160 PF07732 Multicopper oxidase J4G44_12160 PF07731 Multicopper oxidase J4G44_12160 PF00394 Multicopper oxidase J4G44_12170 PF00834 Ribulose-phosphate 3 epimerase family J4G44_12185 PF05987 Bacterial protein of unknown function (DUF898) J4G44_12190 PF00756 Putative esterase J4G44_12200 PF04445 Putative SAM-dependent methyltransferase J4G44_12205 PF02673 Bacitracin resistance protein BacA J4G44_12210 PF00814 Glycoprotease family J4G44_12215 PF00132 Bacterial transferase hexapeptide (six repeats) J4G44_12220 PF00293 NUDIX domain J4G44_12260 PF00425 chorismate binding enzyme J4G44_12260 PF04715 Anthranilate synthase component I, N terminal region J4G44_12265 PF00155 Aminotransferase class I and II J4G44_12270 PF00815 Histidinol dehydrogenase J4G44_12275 PF01634 ATP phosphoribosyltransferase J4G44_12280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4G44_12285 PF01722 BolA-like protein J4G44_12290 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4G44_12295 PF04963 Sigma-54 factor, core binding domain J4G44_12295 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4G44_12295 PF04552 Sigma-54, DNA binding domain J4G44_12340 PF00795 Carbon-nitrogen hydrolase J4G44_12345 PF00437 Type II/IV secretion system protein J4G44_12365 PF01367 5'-3' exonuclease, C-terminal SAM fold J4G44_12365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4G44_12365 PF00476 DNA polymerase family A J4G44_12365 PF01612 3'-5' exonuclease J4G44_12370 PF02325 YGGT family J4G44_12375 PF03807 NADP oxidoreductase coenzyme F420-dependent J4G44_12375 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4G44_12380 PF01171 PP-loop family J4G44_12380 PF09179 TilS substrate binding domain J4G44_12380 PF11734 TilS substrate C-terminal domain J4G44_12385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4G44_12390 PF02541 Ppx/GppA phosphatase family J4G44_12395 PF00085 Thioredoxin J4G44_12400 PF07497 Rho termination factor, RNA-binding domain J4G44_12400 PF07498 Rho termination factor, N-terminal domain J4G44_12400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G44_12410 PF00216 Bacterial DNA-binding protein J4G44_12415 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4G44_12415 PF01588 Putative tRNA binding domain J4G44_12415 PF03147 Ferredoxin-fold anticodon binding domain J4G44_12415 PF03484 tRNA synthetase B5 domain J4G44_12415 PF03483 B3/4 domain J4G44_12420 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4G44_12420 PF01409 tRNA synthetases class II core domain (F) J4G44_12430 PF00453 Ribosomal protein L20 J4G44_12435 PF01632 Ribosomal protein L35 J4G44_12445 PF09335 SNARE associated Golgi protein J4G44_12455 PF02798 Glutathione S-transferase, N-terminal domain J4G44_12455 PF00043 Glutathione S-transferase, C-terminal domain J4G44_12460 PF00707 Translation initiation factor IF-3, C-terminal domain J4G44_12460 PF05198 Translation initiation factor IF-3, N-terminal domain J4G44_12465 PF02824 TGS domain J4G44_12465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G44_12465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4G44_12465 PF03129 Anticodon binding domain J4G44_12475 PF04030 D-arabinono-1,4-lactone oxidase J4G44_12475 PF01565 FAD binding domain J4G44_12480 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal J4G44_12480 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal J4G44_12490 PF13193 AMP-binding enzyme C-terminal domain J4G44_12490 PF00501 AMP-binding enzyme J4G44_12495 PF04751 Protein of unknown function (DUF615) J4G44_12500 PF00381 PTS HPr component phosphorylation site J4G44_12505 PF03668 P-loop ATPase protein family J4G44_12510 PF02569 Pantoate-beta-alanine ligase J4G44_12515 PF02548 Ketopantoate hydroxymethyltransferase J4G44_12520 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4G44_12565 PF00873 AcrB/AcrD/AcrF family J4G44_12590 PF02810 SEC-C motif J4G44_12650 PF13635 Domain of unknown function (DUF4143) J4G44_12650 PF13173 AAA domain J4G44_12665 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J4G44_12665 PF08479 POTRA domain, ShlB-type J4G44_12665 PF17287 POTRA domain J4G44_12670 PF13018 Extended Signal Peptide of Type V secretion system J4G44_12670 PF13332 Hemagglutinin repeat J4G44_12670 PF05860 haemagglutination activity domain J4G44_12670 PF04829 Pre-toxin domain with VENN motif J4G44_12705 PF13356 Arm DNA-binding domain J4G44_12705 PF00589 Phage integrase family J4G44_12710 PF13411 MerR HTH family regulatory protein J4G44_12720 PF01545 Cation efflux family J4G44_12750 PF13427 Domain of unknown function (DUF4111) J4G44_12750 PF01909 Nucleotidyltransferase domain J4G44_12755 PF04463 Protein of unknown function (DUF523) J4G44_12770 PF13610 DDE domain J4G44_12775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_12775 PF03466 LysR substrate binding domain J4G44_12780 PF01636 Phosphotransferase enzyme family J4G44_12785 PF13610 DDE domain J4G44_12790 PF00589 Phage integrase family J4G44_12790 PF13495 Phage integrase, N-terminal SAM-like domain J4G44_12795 PF01494 FAD binding domain J4G44_12800 PF00239 Resolvase, N terminal domain J4G44_12800 PF02796 Helix-turn-helix domain of resolvase J4G44_12820 PF00809 Pterin binding enzyme J4G44_12835 PF00398 Ribosomal RNA adenine dimethylase J4G44_12855 PF01131 DNA topoisomerase J4G44_12855 PF01751 Toprim domain J4G44_12860 PF00186 Dihydrofolate reductase J4G44_12865 PF00303 Thymidylate synthase J4G44_12900 PF01636 Phosphotransferase enzyme family J4G44_12915 PF00809 Pterin binding enzyme J4G44_12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G44_12925 PF03466 LysR substrate binding domain J4G44_12930 PF07690 Major Facilitator Superfamily J4G44_12940 PF00239 Resolvase, N terminal domain J4G44_12940 PF02796 Helix-turn-helix domain of resolvase J4G44_12955 PF05973 Phage derived protein Gp49-like (DUF891) J4G44_12960 PF01381 Helix-turn-helix J4G44_12965 PF00916 Sulfate permease family J4G44_12965 PF01740 STAS domain J4G44_12975 PF05973 Phage derived protein Gp49-like (DUF891) J4G44_12980 PF01381 Helix-turn-helix J4G44_12995 PF00529 HlyD membrane-fusion protein of T1SS J4G44_12995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G44_13000 PF00873 AcrB/AcrD/AcrF family J4G44_13005 PF07690 Major Facilitator Superfamily J4G44_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G44_13010 PF18698 Histidine kinase sensor domain J4G44_13010 PF00512 His Kinase A (phospho-acceptor) domain J4G44_13010 PF00989 PAS fold J4G44_13010 PF00672 HAMP domain J4G44_13015 PF00072 Response regulator receiver domain J4G44_13015 PF00486 Transcriptional regulatory protein, C terminal J4G44_13030 PF00905 Penicillin binding protein transpeptidase domain J4G44_13055 PF05973 Phage derived protein Gp49-like (DUF891) J4G44_13060 PF01381 Helix-turn-helix J4G44_13100 PF02796 Helix-turn-helix domain of resolvase J4G44_13100 PF00239 Resolvase, N terminal domain J4G44_13140 PF02601 Exonuclease VII, large subunit J4G44_13140 PF13742 OB-fold nucleic acid binding domain J4G44_13150 PF11799 impB/mucB/samB family C-terminal domain J4G44_13150 PF00817 impB/mucB/samB family J4G44_13150 PF13438 Domain of unknown function (DUF4113) J4G44_13150 PF11798 IMS family HHH motif J4G44_13155 PF00717 Peptidase S24-like J4G44_13210 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4G44_13210 PF11867 Domain of unknown function (DUF3387) J4G44_13210 PF18766 SWI2/SNF2 ATPase J4G44_13230 PF02384 N-6 DNA Methylase J4G44_13240 PF02195 ParB-like nuclease domain J4G44_13240 PF17762 HTH domain found in ParB protein J4G44_13260 PF02796 Helix-turn-helix domain of resolvase J4G44_13260 PF00239 Resolvase, N terminal domain J4G44_13265 PF01636 Phosphotransferase enzyme family J4G44_13270 PF12848 ABC transporter J4G44_13270 PF00005 ABC transporter J4G44_13285 PF12848 ABC transporter J4G44_13285 PF00005 ABC transporter J4G44_13295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4G44_13310 PF12848 ABC transporter J4G44_13310 PF00005 ABC transporter J4G44_13330 PF00145 C-5 cytosine-specific DNA methylase J4G44_13335 PF07728 AAA domain (dynein-related subfamily) J4G44_13380 PF04221 RelB antitoxin J4G44_13385 PF12848 ABC transporter J4G44_13385 PF00005 ABC transporter J4G44_13410 PF01545 Cation efflux family J4G44_13415 PF00873 AcrB/AcrD/AcrF family J4G44_13435 PF07732 Multicopper oxidase J4G44_13435 PF07731 Multicopper oxidase J4G44_13435 PF00394 Multicopper oxidase J4G44_13455 PF00106 short chain dehydrogenase J4G44_13460 PF00005 ABC transporter J4G44_13460 PF12848 ABC transporter J4G44_13465 PF13610 DDE domain J4G44_13535 PF04221 RelB antitoxin