locus-tag class description J4G45_00010 PF00529 HlyD membrane-fusion protein of T1SS J4G45_00010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G45_00025 PF01381 Helix-turn-helix J4G45_00030 PF05973 Phage derived protein Gp49-like (DUF891) J4G45_00040 PF01740 STAS domain J4G45_00040 PF00916 Sulfate permease family J4G45_00045 PF01381 Helix-turn-helix J4G45_00050 PF05973 Phage derived protein Gp49-like (DUF891) J4G45_00065 PF02796 Helix-turn-helix domain of resolvase J4G45_00065 PF00239 Resolvase, N terminal domain J4G45_00075 PF07690 Major Facilitator Superfamily J4G45_00090 PF00809 Pterin binding enzyme J4G45_00105 PF01636 Phosphotransferase enzyme family J4G45_00140 PF00303 Thymidylate synthase J4G45_00145 PF00186 Dihydrofolate reductase J4G45_00150 PF01131 DNA topoisomerase J4G45_00150 PF01751 Toprim domain J4G45_00170 PF00398 Ribosomal RNA adenine dimethylase J4G45_00185 PF00809 Pterin binding enzyme J4G45_00205 PF02796 Helix-turn-helix domain of resolvase J4G45_00205 PF00239 Resolvase, N terminal domain J4G45_00210 PF01494 FAD binding domain J4G45_00215 PF13495 Phage integrase, N-terminal SAM-like domain J4G45_00215 PF00589 Phage integrase family J4G45_00220 PF13610 DDE domain J4G45_00225 PF01636 Phosphotransferase enzyme family J4G45_00230 PF03466 LysR substrate binding domain J4G45_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_00235 PF13610 DDE domain J4G45_00250 PF04463 Protein of unknown function (DUF523) J4G45_00255 PF01909 Nucleotidyltransferase domain J4G45_00255 PF13427 Domain of unknown function (DUF4111) J4G45_00285 PF01545 Cation efflux family J4G45_00295 PF13411 MerR HTH family regulatory protein J4G45_00300 PF13356 Arm DNA-binding domain J4G45_00300 PF00589 Phage integrase family J4G45_00335 PF05860 haemagglutination activity domain J4G45_00335 PF13332 Hemagglutinin repeat J4G45_00335 PF13018 Extended Signal Peptide of Type V secretion system J4G45_00335 PF04829 Pre-toxin domain with VENN motif J4G45_00340 PF17287 POTRA domain J4G45_00340 PF08479 POTRA domain, ShlB-type J4G45_00340 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J4G45_00355 PF13173 AAA domain J4G45_00355 PF13635 Domain of unknown function (DUF4143) J4G45_00415 PF02810 SEC-C motif J4G45_00440 PF00873 AcrB/AcrD/AcrF family J4G45_00480 PF13614 AAA domain J4G45_00485 PF02195 ParB-like nuclease domain J4G45_00485 PF17762 HTH domain found in ParB protein J4G45_00490 PF02384 N-6 DNA Methylase J4G45_00510 PF18766 SWI2/SNF2 ATPase J4G45_00510 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4G45_00510 PF11867 Domain of unknown function (DUF3387) J4G45_00565 PF00717 Peptidase S24-like J4G45_00570 PF11798 IMS family HHH motif J4G45_00570 PF00817 impB/mucB/samB family J4G45_00570 PF13438 Domain of unknown function (DUF4113) J4G45_00570 PF11799 impB/mucB/samB family C-terminal domain J4G45_00580 PF13742 OB-fold nucleic acid binding domain J4G45_00580 PF02601 Exonuclease VII, large subunit J4G45_00625 PF04221 RelB antitoxin J4G45_00630 PF00005 ABC transporter J4G45_00630 PF12848 ABC transporter J4G45_00655 PF01545 Cation efflux family J4G45_00660 PF00873 AcrB/AcrD/AcrF family J4G45_00680 PF00394 Multicopper oxidase J4G45_00680 PF07732 Multicopper oxidase J4G45_00680 PF07731 Multicopper oxidase J4G45_00700 PF00106 short chain dehydrogenase J4G45_00705 PF12848 ABC transporter J4G45_00705 PF00005 ABC transporter J4G45_00710 PF13610 DDE domain J4G45_00780 PF04221 RelB antitoxin J4G45_00800 PF02796 Helix-turn-helix domain of resolvase J4G45_00800 PF00239 Resolvase, N terminal domain J4G45_00805 PF01636 Phosphotransferase enzyme family J4G45_00810 PF12848 ABC transporter J4G45_00810 PF00005 ABC transporter J4G45_00840 PF01381 Helix-turn-helix J4G45_00845 PF05973 Phage derived protein Gp49-like (DUF891) J4G45_00870 PF00905 Penicillin binding protein transpeptidase domain J4G45_00885 PF00072 Response regulator receiver domain J4G45_00885 PF00486 Transcriptional regulatory protein, C terminal J4G45_00890 PF00672 HAMP domain J4G45_00890 PF00989 PAS fold J4G45_00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_00890 PF18698 Histidine kinase sensor domain J4G45_00890 PF00512 His Kinase A (phospho-acceptor) domain J4G45_00895 PF07690 Major Facilitator Superfamily J4G45_00910 PF03949 Malic enzyme, NAD binding domain J4G45_00910 PF00390 Malic enzyme, N-terminal domain J4G45_00920 PF00750 tRNA synthetases class I (R) J4G45_00920 PF05746 DALR anticodon binding domain J4G45_00920 PF03485 Arginyl tRNA synthetase N terminal domain J4G45_00940 PF02678 Pirin J4G45_00940 PF05726 Pirin C-terminal cupin domain J4G45_00950 PF00990 Diguanylate cyclase, GGDEF domain J4G45_00950 PF00072 Response regulator receiver domain J4G45_00955 PF00958 GMP synthase C terminal domain J4G45_00955 PF02540 NAD synthase J4G45_00955 PF00117 Glutamine amidotransferase class-I J4G45_00960 PF07681 DoxX J4G45_00965 PF09335 SNARE associated Golgi protein J4G45_00980 PF13614 AAA domain J4G45_00985 PF04247 Invasion gene expression up-regulator, SirB J4G45_00990 PF01722 BolA-like protein J4G45_01010 PF07804 HipA-like C-terminal domain J4G45_01010 PF13657 HipA N-terminal domain J4G45_01015 PF12419 SNF2 Helicase protein J4G45_01015 PF00271 Helicase conserved C-terminal domain J4G45_01015 PF00176 SNF2 family N-terminal domain J4G45_01025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G45_01025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G45_01025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G45_01025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G45_01030 PF16363 GDP-mannose 4,6 dehydratase J4G45_01035 PF00342 Phosphoglucose isomerase J4G45_01040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G45_01040 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G45_01040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G45_01050 PF00483 Nucleotidyl transferase J4G45_01055 PF02719 Polysaccharide biosynthesis protein J4G45_01065 PF00953 Glycosyl transferase family 4 J4G45_01070 PF01370 NAD dependent epimerase/dehydratase family J4G45_01080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G45_01080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G45_01080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G45_01085 PF02350 UDP-N-acetylglucosamine 2-epimerase J4G45_01090 PF00534 Glycosyl transferases group 1 J4G45_01090 PF13439 Glycosyltransferase Family 4 J4G45_01100 PF00535 Glycosyl transferase family 2 J4G45_01105 PF04230 Polysaccharide pyruvyl transferase J4G45_01115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G45_01115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G45_01115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G45_01120 PF02563 Polysaccharide biosynthesis/export protein J4G45_01120 PF10531 SLBB domain J4G45_01120 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J4G45_01125 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4G45_01130 PF02706 Chain length determinant protein J4G45_01130 PF13614 AAA domain J4G45_01130 PF13807 G-rich domain on putative tyrosine kinase J4G45_01135 PF04480 Protein of unknown function (DUF559) J4G45_01140 PF14052 Capsule assembly protein Wzi J4G45_01150 PF05173 Dihydrodipicolinate reductase, C-terminus J4G45_01150 PF01113 Dihydrodipicolinate reductase, N-terminus J4G45_01160 PF00226 DnaJ domain J4G45_01160 PF01556 DnaJ C terminal domain J4G45_01160 PF00684 DnaJ central domain J4G45_01170 PF00873 AcrB/AcrD/AcrF family J4G45_01175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G45_01175 PF00529 HlyD membrane-fusion protein of T1SS J4G45_01180 PF00440 Bacterial regulatory proteins, tetR family J4G45_01185 PF00311 Phosphoenolpyruvate carboxylase J4G45_01190 PF00990 Diguanylate cyclase, GGDEF domain J4G45_01190 PF00072 Response regulator receiver domain J4G45_01195 PF00860 Permease family J4G45_01220 PF00920 Dehydratase family J4G45_01225 PF00920 Dehydratase family J4G45_01230 PF02911 Formyl transferase, C-terminal domain J4G45_01230 PF00551 Formyl transferase J4G45_01235 PF01029 NusB family J4G45_01235 PF01189 16S rRNA methyltransferase RsmB/F J4G45_01245 PF00209 Sodium:neurotransmitter symporter family J4G45_01250 PF00171 Aldehyde dehydrogenase family J4G45_01290 PF00579 tRNA synthetases class I (W and Y) J4G45_01295 PF03702 Anhydro-N-acetylmuramic acid kinase J4G45_01300 PF01521 Iron-sulphur cluster biosynthesis J4G45_01320 PF00005 ABC transporter J4G45_01320 PF12848 ABC transporter J4G45_01330 PF00204 DNA gyrase B J4G45_01330 PF00986 DNA gyrase B subunit, carboxyl terminus J4G45_01330 PF18053 DNA gyrase B subunit insert domain J4G45_01330 PF01751 Toprim domain J4G45_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_01335 PF02463 RecF/RecN/SMC N terminal domain J4G45_01340 PF02767 DNA polymerase III beta subunit, central domain J4G45_01340 PF00712 DNA polymerase III beta subunit, N-terminal domain J4G45_01340 PF02768 DNA polymerase III beta subunit, C-terminal domain J4G45_01345 PF11638 DnaA N-terminal domain J4G45_01345 PF00308 Bacterial dnaA protein J4G45_01345 PF08299 Bacterial dnaA protein helix-turn-helix J4G45_01350 PF00468 Ribosomal protein L34 J4G45_01355 PF00825 Ribonuclease P J4G45_01360 PF01809 Putative membrane protein insertion efficiency factor J4G45_01365 PF14849 YidC periplasmic domain J4G45_01365 PF02096 60Kd inner membrane protein J4G45_01370 PF01926 50S ribosome-binding GTPase J4G45_01370 PF12631 MnmE helical domain J4G45_01370 PF10396 GTP-binding protein TrmE N-terminus J4G45_01385 PF02583 Metal-sensitive transcriptional repressor J4G45_01390 PF01545 Cation efflux family J4G45_01395 PF13098 Thioredoxin-like domain J4G45_01395 PF10411 Disulfide bond isomerase protein N-terminus J4G45_01405 PF00156 Phosphoribosyl transferase domain J4G45_01410 PF01979 Amidohydrolase family J4G45_01415 PF03741 Integral membrane protein TerC family J4G45_01425 PF00107 Zinc-binding dehydrogenase J4G45_01425 PF08240 Alcohol dehydrogenase GroES-like domain J4G45_01430 PF01225 Mur ligase family, catalytic domain J4G45_01430 PF02875 Mur ligase family, glutamate ligase domain J4G45_01430 PF08245 Mur ligase middle domain J4G45_01440 PF00731 AIR carboxylase J4G45_01445 PF02222 ATP-grasp domain J4G45_01445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4G45_01450 PF13406 Transglycosylase SLT domain J4G45_01465 PF00012 Hsp70 protein J4G45_01470 PF01025 GrpE J4G45_01480 PF07859 alpha/beta hydrolase fold J4G45_01490 PF12323 Helix-turn-helix domain J4G45_01490 PF01385 Probable transposase J4G45_01490 PF07282 Putative transposase DNA-binding domain J4G45_01500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4G45_01530 PF07690 Major Facilitator Superfamily J4G45_01535 PF07995 Glucose / Sorbosone dehydrogenase J4G45_01540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G45_01545 PF01252 Signal peptidase (SPase) II J4G45_01550 PF08264 Anticodon-binding domain of tRNA J4G45_01550 PF00133 tRNA synthetases class I (I, L, M and V) J4G45_01550 PF06827 Zinc finger found in FPG and IleRS J4G45_01555 PF01687 Riboflavin kinase J4G45_01555 PF06574 FAD synthetase J4G45_01565 PF08362 YcdC-like protein, C-terminal region J4G45_01565 PF00440 Bacterial regulatory proteins, tetR family J4G45_01570 PF00005 ABC transporter J4G45_01575 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_01580 PF00296 Luciferase-like monooxygenase J4G45_01585 PF09084 NMT1/THI5 like J4G45_01590 PF09084 NMT1/THI5 like J4G45_01595 PF00583 Acetyltransferase (GNAT) family J4G45_01595 PF00696 Amino acid kinase family J4G45_01620 PF03358 NADPH-dependent FMN reductase J4G45_01625 PF00106 short chain dehydrogenase J4G45_01630 PF13419 Haloacid dehalogenase-like hydrolase J4G45_01640 PF01323 DSBA-like thioredoxin domain J4G45_01645 PF00440 Bacterial regulatory proteins, tetR family J4G45_01650 PF01138 3' exoribonuclease family, domain 1 J4G45_01650 PF03725 3' exoribonuclease family, domain 2 J4G45_01660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4G45_01660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4G45_01665 PF01510 N-acetylmuramoyl-L-alanine amidase J4G45_01670 PF03023 Lipid II flippase MurJ J4G45_01675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G45_01675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4G45_01680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G45_01680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4G45_01685 PF08240 Alcohol dehydrogenase GroES-like domain J4G45_01685 PF00107 Zinc-binding dehydrogenase J4G45_01690 PF03352 Methyladenine glycosylase J4G45_01705 PF10576 Iron-sulfur binding domain of endonuclease III J4G45_01705 PF00633 Helix-hairpin-helix motif J4G45_01705 PF00730 HhH-GPD superfamily base excision DNA repair protein J4G45_01705 PF14815 NUDIX domain J4G45_01720 PF07043 Protein of unknown function (DUF1328) J4G45_01725 PF03692 Putative zinc- or iron-chelating domain J4G45_01730 PF12002 MgsA AAA+ ATPase C terminal J4G45_01730 PF16193 AAA C-terminal domain J4G45_01730 PF00004 ATPase family associated with various cellular activities (AAA) J4G45_01735 PF00313 'Cold-shock' DNA-binding domain J4G45_01740 PF01259 SAICAR synthetase J4G45_01750 PF00701 Dihydrodipicolinate synthetase family J4G45_01755 PF07690 Major Facilitator Superfamily J4G45_01765 PF00857 Isochorismatase family J4G45_01770 PF02503 Polyphosphate kinase middle domain J4G45_01770 PF13090 Polyphosphate kinase C-terminal domain 2 J4G45_01770 PF17941 Polyphosphate kinase C-terminal domain 1 J4G45_01770 PF13089 Polyphosphate kinase N-terminal domain J4G45_01800 PF02580 D-Tyr-tRNA(Tyr) deacylase J4G45_01805 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4G45_01805 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4G45_01810 PF00581 Rhodanese-like domain J4G45_01815 PF02666 Phosphatidylserine decarboxylase J4G45_01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_01820 PF00512 His Kinase A (phospho-acceptor) domain J4G45_01820 PF00989 PAS fold J4G45_01820 PF11808 Phosphate regulon sensor protein PhoR J4G45_01825 PF00072 Response regulator receiver domain J4G45_01825 PF00486 Transcriptional regulatory protein, C terminal J4G45_01835 PF00106 short chain dehydrogenase J4G45_01840 PF01554 MatE J4G45_01845 PF00155 Aminotransferase class I and II J4G45_01850 PF04286 Protein of unknown function (DUF445) J4G45_01865 PF04262 Glutamate-cysteine ligase J4G45_01870 PF02600 Disulfide bond formation protein DsbB J4G45_01880 PF05728 Uncharacterised protein family (UPF0227) J4G45_01885 PF00204 DNA gyrase B J4G45_01885 PF00986 DNA gyrase B subunit, carboxyl terminus J4G45_01885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_01885 PF01751 Toprim domain J4G45_01895 PF00939 Sodium:sulfate symporter transmembrane region J4G45_01930 PF11412 Disulphide bond corrector protein DsbC J4G45_01930 PF02683 Cytochrome C biogenesis protein transmembrane region J4G45_01935 PF00043 Glutathione S-transferase, C-terminal domain J4G45_01935 PF13417 Glutathione S-transferase, N-terminal domain J4G45_01940 PF02525 Flavodoxin-like fold J4G45_01945 PF07859 alpha/beta hydrolase fold J4G45_01955 PF03960 ArsC family J4G45_01960 PF03372 Endonuclease/Exonuclease/phosphatase family J4G45_01965 PF00156 Phosphoribosyl transferase domain J4G45_02000 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4G45_02000 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4G45_02005 PF04101 Glycosyltransferase family 28 C-terminal domain J4G45_02005 PF03033 Glycosyltransferase family 28 N-terminal domain J4G45_02010 PF01225 Mur ligase family, catalytic domain J4G45_02010 PF02875 Mur ligase family, glutamate ligase domain J4G45_02010 PF08245 Mur ligase middle domain J4G45_02015 PF07478 D-ala D-ala ligase C-terminus J4G45_02015 PF01820 D-ala D-ala ligase N-terminus J4G45_02020 PF03799 Cell division protein FtsQ J4G45_02020 PF08478 POTRA domain, FtsQ-type J4G45_02025 PF02491 SHS2 domain inserted in FTSA J4G45_02030 PF12327 FtsZ family, C-terminal domain J4G45_02030 PF00091 Tubulin/FtsZ family, GTPase domain J4G45_02035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4G45_02050 PF17831 Pyruvate dehydrogenase E1 component middle domain J4G45_02050 PF00456 Transketolase, thiamine diphosphate binding domain J4G45_02055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4G45_02055 PF00364 Biotin-requiring enzyme J4G45_02055 PF02817 e3 binding domain J4G45_02060 PF01169 Uncharacterized protein family UPF0016 J4G45_02065 PF00258 Flavodoxin J4G45_02065 PF01613 Flavin reductase like domain J4G45_02070 PF03692 Putative zinc- or iron-chelating domain J4G45_02075 PF00478 IMP dehydrogenase / GMP reductase domain J4G45_02075 PF00571 CBS domain J4G45_02080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G45_02080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G45_02080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G45_02080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G45_02085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4G45_02085 PF01243 Pyridoxamine 5'-phosphate oxidase J4G45_02090 PF01368 DHH family J4G45_02090 PF02272 DHHA1 domain J4G45_02090 PF17768 RecJ OB domain J4G45_02115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G45_02120 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4G45_02130 PF05552 Conserved TM helix J4G45_02130 PF00924 Mechanosensitive ion channel J4G45_02135 PF16177 Acetyl-coenzyme A synthetase N-terminus J4G45_02135 PF00501 AMP-binding enzyme J4G45_02135 PF13193 AMP-binding enzyme C-terminal domain J4G45_02185 PF01380 SIS domain J4G45_02190 PF12804 MobA-like NTP transferase domain J4G45_02190 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_02190 PF14602 Hexapeptide repeat of succinyl-transferase J4G45_02195 PF04608 Phosphatidylglycerophosphatase A J4G45_02200 PF00586 AIR synthase related protein, N-terminal domain J4G45_02200 PF02769 AIR synthase related protein, C-terminal domain J4G45_02205 PF01029 NusB family J4G45_02210 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4G45_02215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4G45_02215 PF00925 GTP cyclohydrolase II J4G45_02225 PF00196 Bacterial regulatory proteins, luxR family J4G45_02225 PF00072 Response regulator receiver domain J4G45_02235 PF02705 K+ potassium transporter J4G45_02255 PF00230 Major intrinsic protein J4G45_02280 PF00977 Histidine biosynthesis protein J4G45_02285 PF01636 Phosphotransferase enzyme family J4G45_02300 PF00892 EamA-like transporter family J4G45_02305 PF00977 Histidine biosynthesis protein J4G45_02310 PF01612 3'-5' exonuclease J4G45_02310 PF00570 HRDC domain J4G45_02320 PF00117 Glutamine amidotransferase class-I J4G45_02325 PF00475 Imidazoleglycerol-phosphate dehydratase J4G45_02355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J4G45_02355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J4G45_02360 PF00672 HAMP domain J4G45_02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_02360 PF00512 His Kinase A (phospho-acceptor) domain J4G45_02365 PF00072 Response regulator receiver domain J4G45_02365 PF00486 Transcriptional regulatory protein, C terminal J4G45_02370 PF17674 HHH domain J4G45_02370 PF09371 Tex-like protein N-terminal domain J4G45_02370 PF16921 Tex protein YqgF-like domain J4G45_02370 PF00575 S1 RNA binding domain J4G45_02385 PF00106 short chain dehydrogenase J4G45_02390 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G45_02395 PF00005 ABC transporter J4G45_02395 PF12848 ABC transporter J4G45_02415 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G45_02430 PF01795 MraW methylase family J4G45_02440 PF03717 Penicillin-binding Protein dimerisation domain J4G45_02440 PF00905 Penicillin binding protein transpeptidase domain J4G45_02445 PF01225 Mur ligase family, catalytic domain J4G45_02445 PF02875 Mur ligase family, glutamate ligase domain J4G45_02445 PF08245 Mur ligase middle domain J4G45_02450 PF01225 Mur ligase family, catalytic domain J4G45_02450 PF02875 Mur ligase family, glutamate ligase domain J4G45_02450 PF08245 Mur ligase middle domain J4G45_02455 PF00953 Glycosyl transferase family 4 J4G45_02460 PF13847 Methyltransferase domain J4G45_02465 PF00912 Transglycosylase J4G45_02465 PF00905 Penicillin binding protein transpeptidase domain J4G45_02465 PF17092 Penicillin-binding protein OB-like domain J4G45_02470 PF11104 Type IV pilus assembly protein PilM; J4G45_02475 PF05137 Fimbrial assembly protein (PilN) J4G45_02480 PF04350 Pilus assembly protein, PilO J4G45_02490 PF00263 Bacterial type II and III secretion system protein J4G45_02490 PF03958 Bacterial type II/III secretion system short domain J4G45_02490 PF07660 Secretin and TonB N terminus short domain J4G45_02490 PF11741 AMIN domain J4G45_02495 PF01202 Shikimate kinase J4G45_02500 PF01761 3-dehydroquinate synthase J4G45_02510 PF00310 Glutamine amidotransferases class-II J4G45_02510 PF04898 Glutamate synthase central domain J4G45_02510 PF01645 Conserved region in glutamate synthase J4G45_02510 PF01493 GXGXG motif J4G45_02515 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_02515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4G45_02520 PF04011 LemA family J4G45_02525 PF04536 TPM domain J4G45_02535 PF07963 Prokaryotic N-terminal methylation motif J4G45_02535 PF00114 Pilin (bacterial filament) J4G45_02540 PF07963 Prokaryotic N-terminal methylation motif J4G45_02540 PF00114 Pilin (bacterial filament) J4G45_02550 PF15864 Protein glycosylation ligase J4G45_02550 PF04932 O-Antigen ligase J4G45_02550 PF11846 Virulence factor membrane-bound polymerase, C-terminal J4G45_02555 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J4G45_02565 PF00210 Ferritin-like domain J4G45_02570 PF04324 BFD-like [2Fe-2S] binding domain J4G45_02575 PF01042 Endoribonuclease L-PSP J4G45_02580 PF13291 ACT domain J4G45_02580 PF04607 Region found in RelA / SpoT proteins J4G45_02580 PF02824 TGS domain J4G45_02585 PF01192 RNA polymerase Rpb6 J4G45_02590 PF00625 Guanylate kinase J4G45_02595 PF02401 LytB protein J4G45_02600 PF00114 Pilin (bacterial filament) J4G45_02600 PF07963 Prokaryotic N-terminal methylation motif J4G45_02630 PF07963 Prokaryotic N-terminal methylation motif J4G45_02630 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor J4G45_02635 PF00886 Ribosomal protein S16 J4G45_02640 PF05239 PRC-barrel domain J4G45_02640 PF01782 RimM N-terminal domain J4G45_02645 PF01746 tRNA (Guanine-1)-methyltransferase J4G45_02650 PF01245 Ribosomal protein L19 J4G45_02655 PF00561 alpha/beta hydrolase fold J4G45_02660 PF00561 alpha/beta hydrolase fold J4G45_02665 PF03280 Proteobacterial lipase chaperone protein J4G45_02670 PF09157 Pseudouridine synthase II TruB, C-terminal J4G45_02670 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4G45_02670 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4G45_02680 PF00892 EamA-like transporter family J4G45_02685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G45_02685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G45_02690 PF02913 FAD linked oxidases, C-terminal domain J4G45_02690 PF01565 FAD binding domain J4G45_02705 PF07690 Major Facilitator Superfamily J4G45_02710 PF12823 Domain of unknown function (DUF3817) J4G45_02715 PF00080 Copper/zinc superoxide dismutase (SODC) J4G45_02720 PF01594 AI-2E family transporter J4G45_02725 PF13614 AAA domain J4G45_02735 PF01209 ubiE/COQ5 methyltransferase family J4G45_02750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4G45_02755 PF01197 Ribosomal protein L31 J4G45_02770 PF03109 ABC1 family J4G45_02775 PF01554 MatE J4G45_02785 PF04055 Radical SAM superfamily J4G45_02785 PF06969 HemN C-terminal domain J4G45_02790 PF00145 C-5 cytosine-specific DNA methylase J4G45_02795 PF09561 HpaII restriction endonuclease J4G45_02800 PF05163 DinB family J4G45_02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_02805 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G45_02815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4G45_02815 PF01488 Shikimate / quinate 5-dehydrogenase J4G45_02815 PF08501 Shikimate dehydrogenase substrate binding domain J4G45_02825 PF01218 Coproporphyrinogen III oxidase J4G45_02830 PF06969 HemN C-terminal domain J4G45_02830 PF04055 Radical SAM superfamily J4G45_02835 PF00925 GTP cyclohydrolase II J4G45_02840 PF02779 Transketolase, pyrimidine binding domain J4G45_02840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4G45_02840 PF02780 Transketolase, C-terminal domain J4G45_02845 PF00459 Inositol monophosphatase family J4G45_02850 PF00271 Helicase conserved C-terminal domain J4G45_02850 PF00270 DEAD/DEAH box helicase J4G45_02855 PF00005 ABC transporter J4G45_02860 PF02405 Permease MlaE J4G45_02865 PF02470 MlaD protein J4G45_02870 PF05494 MlaC protein J4G45_02880 PF01544 CorA-like Mg2+ transporter protein J4G45_02885 PF03641 Possible lysine decarboxylase J4G45_02895 PF00156 Phosphoribosyl transferase domain J4G45_02900 PF00270 DEAD/DEAH box helicase J4G45_02900 PF00271 Helicase conserved C-terminal domain J4G45_02900 PF17191 RecG wedge domain J4G45_02920 PF01553 Acyltransferase J4G45_02930 PF00375 Sodium:dicarboxylate symporter family J4G45_02940 PF01926 50S ribosome-binding GTPase J4G45_02945 PF02082 Transcriptional regulator J4G45_02950 PF00042 Globin J4G45_02950 PF00175 Oxidoreductase NAD-binding domain J4G45_02950 PF00970 Oxidoreductase FAD-binding domain J4G45_02955 PF05872 Bacterial protein of unknown function (DUF853) J4G45_02960 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G45_02965 PF00117 Glutamine amidotransferase class-I J4G45_02970 PF00338 Ribosomal protein S10p/S20e J4G45_02975 PF00297 Ribosomal protein L3 J4G45_02980 PF00573 Ribosomal protein L4/L1 family J4G45_02985 PF00276 Ribosomal protein L23 J4G45_02990 PF03947 Ribosomal Proteins L2, C-terminal domain J4G45_02990 PF00181 Ribosomal Proteins L2, RNA binding domain J4G45_02995 PF00203 Ribosomal protein S19 J4G45_03000 PF00237 Ribosomal protein L22p/L17e J4G45_03005 PF00189 Ribosomal protein S3, C-terminal domain J4G45_03005 PF07650 KH domain J4G45_03010 PF00252 Ribosomal protein L16p/L10e J4G45_03015 PF00831 Ribosomal L29 protein J4G45_03020 PF00366 Ribosomal protein S17 J4G45_03025 PF00238 Ribosomal protein L14p/L23e J4G45_03030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4G45_03030 PF00467 KOW motif J4G45_03035 PF00281 Ribosomal protein L5 J4G45_03035 PF00673 ribosomal L5P family C-terminus J4G45_03040 PF00253 Ribosomal protein S14p/S29e J4G45_03045 PF00410 Ribosomal protein S8 J4G45_03050 PF00347 Ribosomal protein L6 J4G45_03055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4G45_03060 PF00333 Ribosomal protein S5, N-terminal domain J4G45_03060 PF03719 Ribosomal protein S5, C-terminal domain J4G45_03065 PF00327 Ribosomal protein L30p/L7e J4G45_03070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4G45_03075 PF00344 SecY translocase J4G45_03080 PF00444 Ribosomal protein L36 J4G45_03085 PF00416 Ribosomal protein S13/S18 J4G45_03090 PF00411 Ribosomal protein S11 J4G45_03095 PF00163 Ribosomal protein S4/S9 N-terminal domain J4G45_03095 PF01479 S4 domain J4G45_03100 PF01000 RNA polymerase Rpb3/RpoA insert domain J4G45_03100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4G45_03100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4G45_03105 PF01196 Ribosomal protein L17 J4G45_03110 PF00743 Flavin-binding monooxygenase-like J4G45_03115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_03115 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_03115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_03120 PF03937 Flavinator of succinate dehydrogenase J4G45_03155 PF09526 Probable metal-binding protein (DUF2387) J4G45_03160 PF01432 Peptidase family M3 J4G45_03170 PF17876 Cold shock domain J4G45_03170 PF08206 Ribonuclease B OB domain J4G45_03170 PF00773 RNB domain J4G45_03170 PF00575 S1 RNA binding domain J4G45_03170 PF08461 Ribonuclease R winged-helix domain J4G45_03200 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4G45_03205 PF01625 Peptide methionine sulfoxide reductase J4G45_03220 PF00186 Dihydrofolate reductase J4G45_03225 PF00303 Thymidylate synthase J4G45_03235 PF01790 Prolipoprotein diacylglyceryl transferase J4G45_03250 PF00902 Sec-independent protein translocase protein (TatC) J4G45_03255 PF02416 mttA/Hcf106 family J4G45_03260 PF02416 mttA/Hcf106 family J4G45_03265 PF01725 Ham1 family J4G45_03280 PF00561 alpha/beta hydrolase fold J4G45_03280 PF07021 Methionine biosynthesis protein MetW J4G45_03285 PF00561 alpha/beta hydrolase fold J4G45_03290 PF08502 LeuA allosteric (dimerisation) domain J4G45_03290 PF00682 HMGL-like J4G45_03295 PF01070 FMN-dependent dehydrogenase J4G45_03300 PF18331 PKHD-type hydroxylase C-terminal domain J4G45_03300 PF13640 2OG-Fe(II) oxygenase superfamily J4G45_03305 PF07715 TonB-dependent Receptor Plug Domain J4G45_03305 PF00593 TonB dependent receptor J4G45_03310 PF07715 TonB-dependent Receptor Plug Domain J4G45_03310 PF00593 TonB dependent receptor J4G45_03315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G45_03315 PF05698 Bacterial trigger factor protein (TF) C-terminus J4G45_03315 PF05697 Bacterial trigger factor protein (TF) J4G45_03320 PF00574 Clp protease J4G45_03325 PF07724 AAA domain (Cdc48 subfamily) J4G45_03325 PF10431 C-terminal, D2-small domain, of ClpB protein J4G45_03325 PF06689 ClpX C4-type zinc finger J4G45_03335 PF05683 Fumarase C-terminus J4G45_03335 PF05681 Fumarate hydratase (Fumerase) J4G45_03340 PF13649 Methyltransferase domain J4G45_03345 PF01381 Helix-turn-helix J4G45_03355 PF00145 C-5 cytosine-specific DNA methylase J4G45_03360 PF07085 DRTGG domain J4G45_03360 PF01515 Phosphate acetyl/butaryl transferase J4G45_03365 PF00871 Acetokinase family J4G45_03375 PF00171 Aldehyde dehydrogenase family J4G45_03380 PF12697 Alpha/beta hydrolase family J4G45_03390 PF00933 Glycosyl hydrolase family 3 N terminal domain J4G45_03395 PF11818 C-terminal domain of tail specific protease (DUF3340) J4G45_03395 PF00595 PDZ domain J4G45_03395 PF03572 Peptidase family S41 J4G45_03395 PF17804 Tail specific protease N-terminal domain J4G45_03400 PF00563 EAL domain J4G45_03400 PF00990 Diguanylate cyclase, GGDEF domain J4G45_03400 PF03707 Bacterial signalling protein N terminal repeat J4G45_03410 PF16658 Class II release factor RF3, C-terminal domain J4G45_03410 PF00009 Elongation factor Tu GTP binding domain J4G45_03410 PF03144 Elongation factor Tu domain 2 J4G45_03425 PF01026 TatD related DNase J4G45_03430 PF00899 ThiF family J4G45_03435 PF01207 Dihydrouridine synthase (Dus) J4G45_03445 PF07690 Major Facilitator Superfamily J4G45_03455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4G45_03455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4G45_03460 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4G45_03465 PF02233 NAD(P) transhydrogenase beta subunit J4G45_03475 PF01261 Xylose isomerase-like TIM barrel J4G45_03480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4G45_03480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4G45_03485 PF00378 Enoyl-CoA hydratase/isomerase J4G45_03490 PF00072 Response regulator receiver domain J4G45_03490 PF01627 Hpt domain J4G45_03490 PF00512 His Kinase A (phospho-acceptor) domain J4G45_03490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4G45_03490 PF00672 HAMP domain J4G45_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_03495 PF12323 Helix-turn-helix domain J4G45_03495 PF07282 Putative transposase DNA-binding domain J4G45_03495 PF01385 Probable transposase J4G45_03500 PF00291 Pyridoxal-phosphate dependent enzyme J4G45_03510 PF05958 tRNA (Uracil-5-)-methyltransferase J4G45_03515 PF13291 ACT domain J4G45_03515 PF04607 Region found in RelA / SpoT proteins J4G45_03515 PF02824 TGS domain J4G45_03525 PF07549 SecD/SecF GG Motif J4G45_03525 PF02355 Protein export membrane protein J4G45_03530 PF07549 SecD/SecF GG Motif J4G45_03530 PF13721 SecD export protein N-terminal TM region J4G45_03530 PF02355 Protein export membrane protein J4G45_03535 PF02699 Preprotein translocase subunit J4G45_03540 PF01702 Queuine tRNA-ribosyltransferase J4G45_03550 PF00360 Phytochrome region J4G45_03550 PF00990 Diguanylate cyclase, GGDEF domain J4G45_03550 PF01590 GAF domain J4G45_03550 PF00563 EAL domain J4G45_03555 PF04011 LemA family J4G45_03565 PF02547 Queuosine biosynthesis protein J4G45_03580 PF03971 Monomeric isocitrate dehydrogenase J4G45_03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_03585 PF00672 HAMP domain J4G45_03585 PF01627 Hpt domain J4G45_03585 PF00072 Response regulator receiver domain J4G45_03585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4G45_03585 PF00512 His Kinase A (phospho-acceptor) domain J4G45_03590 PF02321 Outer membrane efflux protein J4G45_03595 PF00005 ABC transporter J4G45_03595 PF12704 MacB-like periplasmic core domain J4G45_03595 PF02687 FtsX-like permease family J4G45_03600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G45_03605 PF01814 Hemerythrin HHE cation binding domain J4G45_03620 PF08264 Anticodon-binding domain of tRNA J4G45_03620 PF00133 tRNA synthetases class I (I, L, M and V) J4G45_03620 PF09334 tRNA synthetases class I (M) J4G45_03620 PF13603 Leucyl-tRNA synthetase, Domain 2 J4G45_03630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4G45_03630 PF00205 Thiamine pyrophosphate enzyme, central domain J4G45_03630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4G45_03635 PF10369 Small subunit of acetolactate synthase J4G45_03640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4G45_03640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4G45_03655 PF01522 Polysaccharide deacetylase J4G45_03675 PF16363 GDP-mannose 4,6 dehydratase J4G45_03680 PF00483 Nucleotidyl transferase J4G45_03685 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4G45_03690 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_03695 PF00535 Glycosyl transferase family 2 J4G45_03710 PF02938 GAD domain J4G45_03710 PF00152 tRNA synthetases class II (D, K and N) J4G45_03710 PF01336 OB-fold nucleic acid binding domain J4G45_03720 PF07715 TonB-dependent Receptor Plug Domain J4G45_03720 PF00593 TonB dependent receptor J4G45_03725 PF13091 PLD-like domain J4G45_03740 PF06146 Phosphate-starvation-inducible E J4G45_03745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_03745 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G45_03745 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_03745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_03750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_03750 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_03750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_03750 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G45_03760 PF00512 His Kinase A (phospho-acceptor) domain J4G45_03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_03760 PF00672 HAMP domain J4G45_03765 PF00486 Transcriptional regulatory protein, C terminal J4G45_03765 PF00072 Response regulator receiver domain J4G45_03780 PF04237 YjbR J4G45_03785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4G45_03800 PF01923 Cobalamin adenosyltransferase J4G45_03805 PF00593 TonB dependent receptor J4G45_03805 PF07715 TonB-dependent Receptor Plug Domain J4G45_03810 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4G45_03815 PF00291 Pyridoxal-phosphate dependent enzyme J4G45_03835 PF08335 GlnD PII-uridylyltransferase J4G45_03835 PF03710 Glutamate-ammonia ligase adenylyltransferase J4G45_03840 PF01063 Amino-transferase class IV J4G45_03865 PF00534 Glycosyl transferases group 1 J4G45_03865 PF13439 Glycosyltransferase Family 4 J4G45_03870 PF01569 PAP2 superfamily J4G45_03875 PF04384 Iron-sulphur cluster assembly J4G45_03880 PF00334 Nucleoside diphosphate kinase J4G45_03885 PF04055 Radical SAM superfamily J4G45_03895 PF13464 Domain of unknown function (DUF4115) J4G45_03900 PF04551 GcpE protein J4G45_03905 PF13393 Histidyl-tRNA synthetase J4G45_03905 PF03129 Anticodon binding domain J4G45_03915 PF01011 PQQ enzyme repeat J4G45_03915 PF13360 PQQ-like domain J4G45_03920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4G45_03920 PF01926 50S ribosome-binding GTPase J4G45_03930 PF03819 MazG nucleotide pyrophosphohydrolase domain J4G45_03935 PF10531 SLBB domain J4G45_03940 PF01743 Poly A polymerase head domain J4G45_03940 PF12626 Polymerase A arginine-rich C-terminus J4G45_03940 PF12627 Probable RNA and SrmB- binding site of polymerase A J4G45_03945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4G45_03950 PF02548 Ketopantoate hydroxymethyltransferase J4G45_03955 PF02569 Pantoate-beta-alanine ligase J4G45_03960 PF03668 P-loop ATPase protein family J4G45_03965 PF00381 PTS HPr component phosphorylation site J4G45_03970 PF04751 Protein of unknown function (DUF615) J4G45_03975 PF13193 AMP-binding enzyme C-terminal domain J4G45_03975 PF00501 AMP-binding enzyme J4G45_03985 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal J4G45_03985 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal J4G45_03990 PF04030 D-arabinono-1,4-lactone oxidase J4G45_03990 PF01565 FAD binding domain J4G45_04000 PF03129 Anticodon binding domain J4G45_04000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G45_04000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4G45_04000 PF02824 TGS domain J4G45_04005 PF05198 Translation initiation factor IF-3, N-terminal domain J4G45_04005 PF00707 Translation initiation factor IF-3, C-terminal domain J4G45_04010 PF00043 Glutathione S-transferase, C-terminal domain J4G45_04010 PF02798 Glutathione S-transferase, N-terminal domain J4G45_04020 PF09335 SNARE associated Golgi protein J4G45_04030 PF01632 Ribosomal protein L35 J4G45_04035 PF00453 Ribosomal protein L20 J4G45_04045 PF01409 tRNA synthetases class II core domain (F) J4G45_04045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4G45_04050 PF03484 tRNA synthetase B5 domain J4G45_04050 PF03147 Ferredoxin-fold anticodon binding domain J4G45_04050 PF01588 Putative tRNA binding domain J4G45_04050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4G45_04050 PF03483 B3/4 domain J4G45_04055 PF00216 Bacterial DNA-binding protein J4G45_04065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G45_04065 PF07498 Rho termination factor, N-terminal domain J4G45_04065 PF07497 Rho termination factor, RNA-binding domain J4G45_04070 PF00085 Thioredoxin J4G45_04075 PF02541 Ppx/GppA phosphatase family J4G45_04080 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4G45_04085 PF11734 TilS substrate C-terminal domain J4G45_04085 PF01171 PP-loop family J4G45_04085 PF09179 TilS substrate binding domain J4G45_04090 PF03807 NADP oxidoreductase coenzyme F420-dependent J4G45_04090 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4G45_04095 PF02325 YGGT family J4G45_04100 PF01612 3'-5' exonuclease J4G45_04100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4G45_04100 PF00476 DNA polymerase family A J4G45_04100 PF01367 5'-3' exonuclease, C-terminal SAM fold J4G45_04120 PF00437 Type II/IV secretion system protein J4G45_04125 PF00795 Carbon-nitrogen hydrolase J4G45_04170 PF04552 Sigma-54, DNA binding domain J4G45_04170 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4G45_04170 PF04963 Sigma-54 factor, core binding domain J4G45_04175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4G45_04180 PF01722 BolA-like protein J4G45_04185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4G45_04190 PF01634 ATP phosphoribosyltransferase J4G45_04195 PF00815 Histidinol dehydrogenase J4G45_04200 PF00155 Aminotransferase class I and II J4G45_04205 PF04715 Anthranilate synthase component I, N terminal region J4G45_04205 PF00425 chorismate binding enzyme J4G45_04245 PF00293 NUDIX domain J4G45_04250 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_04255 PF00814 Glycoprotease family J4G45_04260 PF02673 Bacitracin resistance protein BacA J4G45_04265 PF04445 Putative SAM-dependent methyltransferase J4G45_04275 PF00756 Putative esterase J4G45_04280 PF05987 Bacterial protein of unknown function (DUF898) J4G45_04295 PF00834 Ribulose-phosphate 3 epimerase family J4G45_04305 PF07731 Multicopper oxidase J4G45_04305 PF00394 Multicopper oxidase J4G45_04305 PF07732 Multicopper oxidase J4G45_04320 PF00893 Small Multidrug Resistance protein J4G45_04325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4G45_04325 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4G45_04330 PF08378 Nuclease-related domain J4G45_04335 PF08543 Phosphomethylpyrimidine kinase J4G45_04335 PF02581 Thiamine monophosphate synthase J4G45_04340 PF13419 Haloacid dehalogenase-like hydrolase J4G45_04350 PF03653 Uncharacterised protein family (UPF0093) J4G45_04355 PF02801 Beta-ketoacyl synthase, C-terminal domain J4G45_04355 PF00109 Beta-ketoacyl synthase, N-terminal domain J4G45_04365 PF00164 Ribosomal protein S12/S23 J4G45_04370 PF00177 Ribosomal protein S7p/S5e J4G45_04375 PF14492 Elongation Factor G, domain II J4G45_04375 PF03764 Elongation factor G, domain IV J4G45_04375 PF00009 Elongation factor Tu GTP binding domain J4G45_04375 PF03144 Elongation factor Tu domain 2 J4G45_04375 PF00679 Elongation factor G C-terminus J4G45_04380 PF03144 Elongation factor Tu domain 2 J4G45_04380 PF00009 Elongation factor Tu GTP binding domain J4G45_04380 PF03143 Elongation factor Tu C-terminal domain J4G45_04390 PF00583 Acetyltransferase (GNAT) family J4G45_04395 PF04377 Arginine-tRNA-protein transferase, C terminus J4G45_04395 PF04376 Arginine-tRNA-protein transferase, N terminus J4G45_04400 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4G45_04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_04410 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4G45_04410 PF17854 FtsK alpha domain J4G45_04410 PF09397 Ftsk gamma domain J4G45_04410 PF01580 FtsK/SpoIIIE family J4G45_04420 PF03776 Septum formation topological specificity factor MinE J4G45_04425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4G45_04430 PF03775 Septum formation inhibitor MinC, C-terminal domain J4G45_04440 PF01553 Acyltransferase J4G45_04445 PF00691 OmpA family J4G45_04445 PF13488 Glycine zipper J4G45_04450 PF13361 UvrD-like helicase C-terminal domain J4G45_04450 PF00580 UvrD/REP helicase N-terminal domain J4G45_04455 PF00692 dUTPase J4G45_04460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G45_04460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G45_04460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G45_04460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G45_04465 PF00696 Amino acid kinase family J4G45_04475 PF13230 Glutamine amidotransferases class-II J4G45_04485 PF01814 Hemerythrin HHE cation binding domain J4G45_04495 PF03658 RnfH family Ubiquitin J4G45_04500 PF04355 SmpA / OmlA family J4G45_04505 PF01475 Ferric uptake regulator family J4G45_04510 PF00437 Type II/IV secretion system protein J4G45_04515 PF00437 Type II/IV secretion system protein J4G45_04520 PF01168 Alanine racemase, N-terminal domain J4G45_04535 PF12320 Type 5 capsule protein repressor C-terminal domain J4G45_04535 PF00149 Calcineurin-like phosphoesterase J4G45_04545 PF08338 Domain of unknown function (DUF1731) J4G45_04545 PF01370 NAD dependent epimerase/dehydratase family J4G45_04550 PF01266 FAD dependent oxidoreductase J4G45_04555 PF00490 Delta-aminolevulinic acid dehydratase J4G45_04560 PF03061 Thioesterase superfamily J4G45_04570 PF00501 AMP-binding enzyme J4G45_04585 PF13185 GAF domain J4G45_04585 PF02954 Bacterial regulatory protein, Fis family J4G45_04585 PF00158 Sigma-54 interaction domain J4G45_04590 PF00753 Metallo-beta-lactamase superfamily J4G45_04595 PF01925 Sulfite exporter TauE/SafE J4G45_04605 PF00005 ABC transporter J4G45_04605 PF02687 FtsX-like permease family J4G45_04605 PF12704 MacB-like periplasmic core domain J4G45_04630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4G45_04630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4G45_04645 PF05992 SbmA/BacA-like family J4G45_04665 PF02934 GatB/GatE catalytic domain J4G45_04665 PF02637 GatB domain J4G45_04670 PF01425 Amidase J4G45_04675 PF02686 Glu-tRNAGln amidotransferase C subunit J4G45_04685 PF04085 rod shape-determining protein MreC J4G45_04690 PF04093 rod shape-determining protein MreD J4G45_04695 PF02545 Maf-like protein J4G45_04700 PF10150 Ribonuclease E/G family J4G45_04700 PF00575 S1 RNA binding domain J4G45_04710 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain J4G45_04710 PF06974 Protein of unknown function (DUF1298) J4G45_04715 PF01507 Phosphoadenosine phosphosulfate reductase family J4G45_04745 PF00005 ABC transporter J4G45_04745 PF17850 CysA C-terminal regulatory domain J4G45_04745 PF12857 TOBE-like domain J4G45_04750 PF00324 Amino acid permease J4G45_04755 PF04303 PrpF protein J4G45_04760 PF00348 Polyprenyl synthetase J4G45_04770 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J4G45_04775 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J4G45_04780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J4G45_04780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J4G45_04790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4G45_04790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J4G45_04790 PF10531 SLBB domain J4G45_04795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4G45_04795 PF00384 Molybdopterin oxidoreductase J4G45_04795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4G45_04800 PF00146 NADH dehydrogenase J4G45_04805 PF12838 4Fe-4S dicluster domain J4G45_04810 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J4G45_04815 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4G45_04820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4G45_04820 PF00361 Proton-conducting membrane transporter J4G45_04825 PF00361 Proton-conducting membrane transporter J4G45_04830 PF00361 Proton-conducting membrane transporter J4G45_04840 PF00313 'Cold-shock' DNA-binding domain J4G45_04845 PF00313 'Cold-shock' DNA-binding domain J4G45_04850 PF03466 LysR substrate binding domain J4G45_04850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_04855 PF00970 Oxidoreductase FAD-binding domain J4G45_04855 PF00175 Oxidoreductase NAD-binding domain J4G45_04875 PF05552 Conserved TM helix J4G45_04900 PF00291 Pyridoxal-phosphate dependent enzyme J4G45_04915 PF00753 Metallo-beta-lactamase superfamily J4G45_04915 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4G45_04925 PF09334 tRNA synthetases class I (M) J4G45_04925 PF01588 Putative tRNA binding domain J4G45_04930 PF10609 NUBPL iron-transfer P-loop NTPase J4G45_04940 PF00692 dUTPase J4G45_04965 PF03129 Anticodon binding domain J4G45_04965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G45_04965 PF04073 Aminoacyl-tRNA editing domain J4G45_04970 PF00873 AcrB/AcrD/AcrF family J4G45_04975 PF13533 Biotin-lipoyl like J4G45_04985 PF00072 Response regulator receiver domain J4G45_04990 PF00072 Response regulator receiver domain J4G45_04995 PF01584 CheW-like domain J4G45_05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4G45_05000 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4G45_05005 PF02895 Signal transducing histidine kinase, homodimeric domain J4G45_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_05005 PF01627 Hpt domain J4G45_05005 PF07194 P2 response regulator binding domain J4G45_05005 PF01584 CheW-like domain J4G45_05005 PF02895 Signal transducing histidine kinase, homodimeric domain J4G45_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_05005 PF07194 P2 response regulator binding domain J4G45_05005 PF01584 CheW-like domain J4G45_05005 PF01627 Hpt domain J4G45_05015 PF07687 Peptidase dimerisation domain J4G45_05015 PF01546 Peptidase family M20/M25/M40 J4G45_05020 PF08085 Entericidin EcnA/B family J4G45_05030 PF04304 Protein of unknown function (DUF454) J4G45_05090 PF00667 FAD binding domain J4G45_05090 PF00258 Flavodoxin J4G45_05090 PF00175 Oxidoreductase NAD-binding domain J4G45_05100 PF12805 FUSC-like inner membrane protein yccS J4G45_05105 PF07690 Major Facilitator Superfamily J4G45_05115 PF03616 Sodium/glutamate symporter J4G45_05125 PF00665 Integrase core domain J4G45_05125 PF13936 Helix-turn-helix domain J4G45_05135 PF01734 Patatin-like phospholipase J4G45_05145 PF03061 Thioesterase superfamily J4G45_05155 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4G45_05155 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4G45_05160 PF07152 YaeQ protein J4G45_05165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G45_05170 PF00990 Diguanylate cyclase, GGDEF domain J4G45_05175 PF00085 Thioredoxin J4G45_05180 PF00107 Zinc-binding dehydrogenase J4G45_05180 PF08240 Alcohol dehydrogenase GroES-like domain J4G45_05195 PF00571 CBS domain J4G45_05195 PF03471 Transporter associated domain J4G45_05195 PF01595 Cyclin M transmembrane N-terminal domain J4G45_05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_05200 PF03466 LysR substrate binding domain J4G45_05205 PF00463 Isocitrate lyase family J4G45_05215 PF01553 Acyltransferase J4G45_05220 PF00444 Ribosomal protein L36 J4G45_05230 PF03717 Penicillin-binding Protein dimerisation domain J4G45_05230 PF00905 Penicillin binding protein transpeptidase domain J4G45_05245 PF05191 Adenylate kinase, active site lid J4G45_05260 PF00633 Helix-hairpin-helix motif J4G45_05260 PF00730 HhH-GPD superfamily base excision DNA repair protein J4G45_05260 PF10576 Iron-sulfur binding domain of endonuclease III J4G45_05265 PF04060 Putative Fe-S cluster J4G45_05270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4G45_05270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4G45_05280 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4G45_05285 PF02590 Predicted SPOUT methyltransferase J4G45_05290 PF04389 Peptidase family M28 J4G45_05295 PF00004 ATPase family associated with various cellular activities (AAA) J4G45_05295 PF05362 Lon protease (S16) C-terminal proteolytic domain J4G45_05295 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4G45_05300 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4G45_05315 PF02652 L-lactate permease J4G45_05320 PF00392 Bacterial regulatory proteins, gntR family J4G45_05320 PF07729 FCD domain J4G45_05325 PF01070 FMN-dependent dehydrogenase J4G45_05330 PF01565 FAD binding domain J4G45_05330 PF09330 D-lactate dehydrogenase, membrane binding J4G45_05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_05335 PF03466 LysR substrate binding domain J4G45_05345 PF00990 Diguanylate cyclase, GGDEF domain J4G45_05345 PF07694 5TMR of 5TMR-LYT J4G45_05355 PF01219 Prokaryotic diacylglycerol kinase J4G45_05365 PF00512 His Kinase A (phospho-acceptor) domain J4G45_05365 PF08521 Two-component sensor kinase N-terminal J4G45_05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_05385 PF03050 Transposase IS66 family J4G45_05385 PF13817 IS66 C-terminal element J4G45_05385 PF13007 Transposase C of IS166 homeodomain J4G45_05385 PF13005 zinc-finger binding domain of transposase IS66 J4G45_05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_05390 PF00512 His Kinase A (phospho-acceptor) domain J4G45_05390 PF16736 Single Cache-like J4G45_05390 PF00989 PAS fold J4G45_05395 PF01594 AI-2E family transporter J4G45_05405 PF00376 MerR family regulatory protein J4G45_05405 PF09278 MerR, DNA binding J4G45_05410 PF00403 Heavy-metal-associated domain J4G45_05425 PF01717 Cobalamin-independent synthase, Catalytic domain J4G45_05430 PF01613 Flavin reductase like domain J4G45_05435 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system J4G45_05460 PF03695 Uncharacterised protein family (UPF0149) J4G45_05465 PF00557 Metallopeptidase family M24 J4G45_05465 PF05195 Aminopeptidase P, N-terminal domain J4G45_05475 PF04221 RelB antitoxin J4G45_05480 PF01494 FAD binding domain J4G45_05485 PF01494 FAD binding domain J4G45_05495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4G45_05500 PF02021 Uncharacterised protein family UPF0102 J4G45_05505 PF04972 BON domain J4G45_05510 PF00135 Carboxylesterase family J4G45_05515 PF00293 NUDIX domain J4G45_05515 PF09297 NADH pyrophosphatase zinc ribbon domain J4G45_05525 PF00929 Exonuclease J4G45_05530 PF01476 LysM domain J4G45_05530 PF01464 Transglycosylase SLT domain J4G45_05530 PF01476 LysM domain J4G45_05530 PF01464 Transglycosylase SLT domain J4G45_05535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4G45_05540 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_05545 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_05545 PF12911 N-terminal TM domain of oligopeptide transport permease C J4G45_05550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4G45_05550 PF00005 ABC transporter J4G45_05555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G45_05555 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_05580 PF00324 Amino acid permease J4G45_05595 PF00929 Exonuclease J4G45_05600 PF01979 Amidohydrolase family J4G45_05605 PF00360 Phytochrome region J4G45_05605 PF00563 EAL domain J4G45_05605 PF01590 GAF domain J4G45_05605 PF00990 Diguanylate cyclase, GGDEF domain J4G45_05610 PF00764 Arginosuccinate synthase J4G45_05615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G45_05615 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_05640 PF13488 Glycine zipper J4G45_05640 PF00691 OmpA family J4G45_05645 PF02769 AIR synthase related protein, C-terminal domain J4G45_05645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4G45_05645 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4G45_05650 PF11890 Domain of unknown function (DUF3410) J4G45_05650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G45_05650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G45_05655 PF00152 tRNA synthetases class II (D, K and N) J4G45_05660 PF01743 Poly A polymerase head domain J4G45_05660 PF12627 Probable RNA and SrmB- binding site of polymerase A J4G45_05665 PF00390 Malic enzyme, N-terminal domain J4G45_05665 PF03949 Malic enzyme, NAD binding domain J4G45_05665 PF01515 Phosphate acetyl/butaryl transferase J4G45_05670 PF00563 EAL domain J4G45_05670 PF00990 Diguanylate cyclase, GGDEF domain J4G45_05670 PF03707 Bacterial signalling protein N terminal repeat J4G45_05675 PF04452 RNA methyltransferase J4G45_05680 PF02219 Methylenetetrahydrofolate reductase J4G45_05685 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J4G45_05685 PF05221 S-adenosyl-L-homocysteine hydrolase J4G45_05695 PF08238 Sel1 repeat J4G45_05710 PF04055 Radical SAM superfamily J4G45_05715 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_05715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G45_05735 PF00557 Metallopeptidase family M24 J4G45_05740 PF00318 Ribosomal protein S2 J4G45_05745 PF00889 Elongation factor TS J4G45_05760 PF03330 Lytic transglycolase J4G45_05760 PF05036 Sporulation related domain J4G45_05765 PF13406 Transglycosylase SLT domain J4G45_05775 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4G45_05775 PF14489 QueF-like protein J4G45_05780 PF01061 ABC-2 type transporter J4G45_05785 PF00005 ABC transporter J4G45_05830 PF03837 RecT family J4G45_05870 PF00772 DnaB-like helicase N terminal domain J4G45_05870 PF03796 DnaB-like helicase C terminal domain J4G45_05930 PF03592 Terminase small subunit J4G45_06040 PF00589 Phage integrase family J4G45_06045 PF13356 Arm DNA-binding domain J4G45_06045 PF00589 Phage integrase family J4G45_06075 PF09588 YqaJ-like viral recombinase domain J4G45_06295 PF17758 Proteasomal ATPase OB N-terminal domain J4G45_06295 PF16450 Proteasomal ATPase OB C-terminal domain J4G45_06295 PF00004 ATPase family associated with various cellular activities (AAA) J4G45_06315 PF13784 Fic/DOC family N-terminal J4G45_06315 PF02661 Fic/DOC family J4G45_06350 PF00464 Serine hydroxymethyltransferase J4G45_06355 PF03449 Transcription elongation factor, N-terminal J4G45_06355 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G45_06365 PF05816 Toxic anion resistance protein (TelA) J4G45_06375 PF13192 Thioredoxin domain J4G45_06375 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_06380 PF00037 4Fe-4S binding domain J4G45_06385 PF01136 Peptidase family U32 J4G45_06385 PF16325 Peptidase family U32 C-terminal domain J4G45_06390 PF03960 ArsC family J4G45_06395 PF01022 Bacterial regulatory protein, arsR family J4G45_06400 PF01758 Sodium Bile acid symporter family J4G45_06405 PF03358 NADPH-dependent FMN reductase J4G45_06410 PF13411 MerR HTH family regulatory protein J4G45_06430 PF00175 Oxidoreductase NAD-binding domain J4G45_06430 PF00970 Oxidoreductase FAD-binding domain J4G45_06435 PF18389 TrmO C-terminal domain J4G45_06435 PF01980 tRNA-methyltransferase O J4G45_06445 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4G45_06445 PF00437 Type II/IV secretion system protein J4G45_06455 PF00486 Transcriptional regulatory protein, C terminal J4G45_06455 PF00072 Response regulator receiver domain J4G45_06460 PF00512 His Kinase A (phospho-acceptor) domain J4G45_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_06460 PF08521 Two-component sensor kinase N-terminal J4G45_06470 PF02581 Thiamine monophosphate synthase J4G45_06480 PF00905 Penicillin binding protein transpeptidase domain J4G45_06480 PF14814 Bifunctional transglycosylase second domain J4G45_06480 PF00912 Transglycosylase J4G45_06485 PF01513 ATP-NAD kinase J4G45_06490 PF07023 Protein of unknown function (DUF1315) J4G45_06495 PF00591 Glycosyl transferase family, a/b domain J4G45_06495 PF02885 Glycosyl transferase family, helical bundle domain J4G45_06500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_06500 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_06500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_06505 PF01817 Chorismate mutase type II J4G45_06505 PF01842 ACT domain J4G45_06505 PF00800 Prephenate dehydratase J4G45_06510 PF00155 Aminotransferase class I and II J4G45_06515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4G45_06530 PF03883 Peroxide stress protein YaaA J4G45_06535 PF03441 FAD binding domain of DNA photolyase J4G45_06535 PF00875 DNA photolyase J4G45_06540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G45_06545 PF00768 D-alanyl-D-alanine carboxypeptidase J4G45_06545 PF07943 Penicillin-binding protein 5, C-terminal domain J4G45_06555 PF00849 RNA pseudouridylate synthase J4G45_06560 PF02567 Phenazine biosynthesis-like protein J4G45_06565 PF05193 Peptidase M16 inactive domain J4G45_06565 PF00675 Insulinase (Peptidase family M16) J4G45_06600 PF02581 Thiamine monophosphate synthase J4G45_06605 PF00202 Aminotransferase class-III J4G45_06610 PF00849 RNA pseudouridylate synthase J4G45_06615 PF00271 Helicase conserved C-terminal domain J4G45_06615 PF12137 RNA polymerase recycling family C-terminal J4G45_06615 PF00176 SNF2 family N-terminal domain J4G45_06615 PF18339 RapA N-terminal Tudor like domain 1 J4G45_06615 PF18337 RapA N-terminal Tudor like domain J4G45_06625 PF00440 Bacterial regulatory proteins, tetR family J4G45_06630 PF00175 Oxidoreductase NAD-binding domain J4G45_06630 PF00970 Oxidoreductase FAD-binding domain J4G45_06630 PF00042 Globin J4G45_06635 PF00487 Fatty acid desaturase J4G45_06645 PF07759 Protein of unknown function (DUF1615) J4G45_06650 PF01207 Dihydrouridine synthase (Dus) J4G45_06655 PF03060 Nitronate monooxygenase J4G45_06685 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G45_06685 PF00578 AhpC/TSA family J4G45_06690 PF00271 Helicase conserved C-terminal domain J4G45_06690 PF04408 Helicase associated domain (HA2) J4G45_06690 PF11898 Domain of unknown function (DUF3418) J4G45_06690 PF00270 DEAD/DEAH box helicase J4G45_06690 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4G45_06695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4G45_06695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4G45_06700 PF01406 tRNA synthetases class I (C) catalytic domain J4G45_06700 PF09190 DALR domain J4G45_06710 PF00571 CBS domain J4G45_06710 PF01380 SIS domain J4G45_06725 PF03968 OstA-like protein J4G45_06730 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4G45_06730 PF00005 ABC transporter J4G45_06735 PF01205 Uncharacterized protein family UPF0029 J4G45_06750 PF01596 O-methyltransferase J4G45_06760 PF11953 Domain of unknown function (DUF3470) J4G45_06760 PF00037 4Fe-4S binding domain J4G45_06765 PF05190 MutS family domain IV J4G45_06765 PF00488 MutS domain V J4G45_06765 PF05192 MutS domain III J4G45_06765 PF01624 MutS domain I J4G45_06765 PF05188 MutS domain II J4G45_06785 PF00581 Rhodanese-like domain J4G45_06810 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_06815 PF00588 SpoU rRNA Methylase family J4G45_06820 PF02811 PHP domain J4G45_06820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4G45_06820 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4G45_06820 PF01336 OB-fold nucleic acid binding domain J4G45_06820 PF14579 Helix-hairpin-helix motif J4G45_06825 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_06830 PF00005 ABC transporter J4G45_06830 PF09383 NIL domain J4G45_06835 PF03180 NLPA lipoprotein J4G45_06840 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4G45_06840 PF02843 Phosphoribosylglycinamide synthetase, C domain J4G45_06840 PF02844 Phosphoribosylglycinamide synthetase, N domain J4G45_06845 PF01808 AICARFT/IMPCHase bienzyme J4G45_06845 PF02142 MGS-like domain J4G45_06850 PF02954 Bacterial regulatory protein, Fis family J4G45_06880 PF01134 Glucose inhibited division protein A J4G45_06880 PF13932 GidA associated domain J4G45_06895 PF02803 Thiolase, C-terminal domain J4G45_06895 PF00108 Thiolase, N-terminal domain J4G45_06910 PF00106 short chain dehydrogenase J4G45_06915 PF00842 Alanine racemase, C-terminal domain J4G45_06915 PF01168 Alanine racemase, N-terminal domain J4G45_06925 PF00772 DnaB-like helicase N terminal domain J4G45_06925 PF03796 DnaB-like helicase C terminal domain J4G45_06930 PF03948 Ribosomal protein L9, C-terminal domain J4G45_06930 PF01281 Ribosomal protein L9, N-terminal domain J4G45_06935 PF01084 Ribosomal protein S18 J4G45_06940 PF01250 Ribosomal protein S6 J4G45_06945 PF01040 UbiA prenyltransferase family J4G45_06950 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4G45_06955 PF00510 Cytochrome c oxidase subunit III J4G45_06960 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4G45_06965 PF06481 COX Aromatic Rich Motif J4G45_06965 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4G45_06975 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4G45_06975 PF00391 PEP-utilising enzyme, mobile domain J4G45_06975 PF02896 PEP-utilising enzyme, TIM barrel domain J4G45_06980 PF03618 Kinase/pyrophosphorylase J4G45_06990 PF00296 Luciferase-like monooxygenase J4G45_07005 PF03462 PCRF domain J4G45_07005 PF00472 RF-1 domain J4G45_07010 PF17827 PrmC N-terminal domain J4G45_07010 PF13847 Methyltransferase domain J4G45_07015 PF01062 Bestrophin, RFP-TM, chloride channel J4G45_07030 PF00106 short chain dehydrogenase J4G45_07035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_07035 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_07035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_07040 PF00501 AMP-binding enzyme J4G45_07040 PF13193 AMP-binding enzyme C-terminal domain J4G45_07050 PF00899 ThiF family J4G45_07055 PF03109 ABC1 family J4G45_07060 PF02152 Dihydroneopterin aldolase J4G45_07070 PF03232 Ubiquinone biosynthesis protein COQ7 J4G45_07075 PF07690 Major Facilitator Superfamily J4G45_07080 PF17243 POTRA domain TamA domain 1 J4G45_07080 PF01103 Surface antigen J4G45_07080 PF07244 Surface antigen variable number repeat J4G45_07100 PF00330 Aconitase family (aconitate hydratase) J4G45_07100 PF06434 Aconitate hydratase 2 N-terminus J4G45_07100 PF11791 Aconitate B N-terminal domain J4G45_07115 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4G45_07115 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4G45_07115 PF01433 Peptidase family M1 domain J4G45_07120 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_07120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G45_07130 PF00582 Universal stress protein family J4G45_07135 PF00582 Universal stress protein family J4G45_07145 PF03594 Benzoate membrane transport protein J4G45_07150 PF01810 LysE type translocator J4G45_07155 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4G45_07160 PF03466 LysR substrate binding domain J4G45_07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_07170 PF02803 Thiolase, C-terminal domain J4G45_07170 PF00108 Thiolase, N-terminal domain J4G45_07185 PF00144 Beta-lactamase J4G45_07190 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J4G45_07190 PF12170 DNA polymerase III tau subunit V interacting with alpha J4G45_07190 PF12169 DNA polymerase III subunits gamma and tau domain III J4G45_07195 PF03061 Thioesterase superfamily J4G45_07200 PF00465 Iron-containing alcohol dehydrogenase J4G45_07205 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4G45_07210 PF01565 FAD binding domain J4G45_07210 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4G45_07225 PF00196 Bacterial regulatory proteins, luxR family J4G45_07225 PF00072 Response regulator receiver domain J4G45_07230 PF13492 GAF domain J4G45_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_07230 PF07730 Histidine kinase J4G45_07235 PF08007 Cupin superfamily protein J4G45_07260 PF02545 Maf-like protein J4G45_07270 PF00162 Phosphoglycerate kinase J4G45_07280 PF01116 Fructose-bisphosphate aldolase class-II J4G45_07295 PF00881 Nitroreductase family J4G45_07300 PF03328 HpcH/HpaI aldolase/citrate lyase family J4G45_07305 PF00149 Calcineurin-like phosphoesterase J4G45_07310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4G45_07315 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G45_07315 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4G45_07340 PF05958 tRNA (Uracil-5-)-methyltransferase J4G45_07345 PF02146 Sir2 family J4G45_07350 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_07350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_07350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_07355 PF12697 Alpha/beta hydrolase family J4G45_07365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G45_07365 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_07385 PF00117 Glutamine amidotransferase class-I J4G45_07385 PF06418 CTP synthase N-terminus J4G45_07390 PF00793 DAHP synthetase I family J4G45_07395 PF03952 Enolase, N-terminal domain J4G45_07395 PF00113 Enolase, C-terminal TIM barrel domain J4G45_07400 PF04977 Septum formation initiator J4G45_07405 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4G45_07410 PF01098 Cell cycle protein J4G45_07425 PF02542 YgbB family J4G45_07435 PF00793 DAHP synthetase I family J4G45_07440 PF01925 Sulfite exporter TauE/SafE J4G45_07445 PF02684 Lipid-A-disaccharide synthetase J4G45_07450 PF12852 Cupin J4G45_07450 PF12833 Helix-turn-helix domain J4G45_07455 PF00487 Fatty acid desaturase J4G45_07465 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J4G45_07470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_07470 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_07470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_07475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_07475 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_07475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_07480 PF03109 ABC1 family J4G45_07495 PF05175 Methyltransferase small domain J4G45_07500 PF01264 Chorismate synthase J4G45_07510 PF08173 Membrane bound YbgT-like protein J4G45_07515 PF02322 Cytochrome bd terminal oxidase subunit II J4G45_07520 PF01654 Cytochrome bd terminal oxidase subunit I J4G45_07530 PF07290 Protein of unknown function (DUF1449) J4G45_07540 PF00294 pfkB family carbohydrate kinase J4G45_07550 PF05193 Peptidase M16 inactive domain J4G45_07550 PF00675 Insulinase (Peptidase family M16) J4G45_07550 PF08367 Peptidase M16C associated J4G45_07555 PF02253 Phospholipase A1 J4G45_07560 PF02386 Cation transport protein J4G45_07565 PF02254 TrkA-N domain J4G45_07565 PF02080 TrkA-C domain J4G45_07570 PF00291 Pyridoxal-phosphate dependent enzyme J4G45_07570 PF00585 C-terminal regulatory domain of Threonine dehydratase J4G45_07575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4G45_07585 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G45_07585 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4G45_07595 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4G45_07600 PF07724 AAA domain (Cdc48 subfamily) J4G45_07600 PF00004 ATPase family associated with various cellular activities (AAA) J4G45_07600 PF17871 AAA lid domain J4G45_07600 PF02861 Clp amino terminal domain, pathogenicity island component J4G45_07600 PF10431 C-terminal, D2-small domain, of ClpB protein J4G45_07605 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J4G45_07615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4G45_07615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4G45_07620 PF00440 Bacterial regulatory proteins, tetR family J4G45_07630 PF00285 Citrate synthase, C-terminal domain J4G45_07645 PF02464 Competence-damaged protein J4G45_07645 PF18146 Damage-inducible protein CinA KH domain J4G45_07645 PF00994 Probable molybdopterin binding domain J4G45_07695 PF12832 MFS_1 like family J4G45_07700 PF01425 Amidase J4G45_07705 PF00990 Diguanylate cyclase, GGDEF domain J4G45_07705 PF17151 Periplasmic sensor domain J4G45_07715 PF00924 Mechanosensitive ion channel J4G45_07720 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J4G45_07725 PF06912 Protein of unknown function (DUF1275) J4G45_07730 PF00375 Sodium:dicarboxylate symporter family J4G45_07735 PF01740 STAS domain J4G45_07735 PF00916 Sulfate permease family J4G45_07745 PF01553 Acyltransferase J4G45_07750 PF00291 Pyridoxal-phosphate dependent enzyme J4G45_07755 PF08360 QacR-like protein, C-terminal region J4G45_07755 PF00440 Bacterial regulatory proteins, tetR family J4G45_07760 PF02803 Thiolase, C-terminal domain J4G45_07760 PF00108 Thiolase, N-terminal domain J4G45_07765 PF12146 Serine aminopeptidase, S33 J4G45_07770 PF02803 Thiolase, C-terminal domain J4G45_07770 PF00108 Thiolase, N-terminal domain J4G45_07775 PF01144 Coenzyme A transferase J4G45_07780 PF01144 Coenzyme A transferase J4G45_07785 PF03594 Benzoate membrane transport protein J4G45_07790 PF00106 short chain dehydrogenase J4G45_07795 PF00970 Oxidoreductase FAD-binding domain J4G45_07795 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G45_07795 PF00175 Oxidoreductase NAD-binding domain J4G45_07800 PF00866 Ring hydroxylating beta subunit J4G45_07805 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4G45_07805 PF00355 Rieske [2Fe-2S] domain J4G45_07810 PF00775 Dioxygenase J4G45_07810 PF04444 Catechol dioxygenase N terminus J4G45_07815 PF02426 Muconolactone delta-isomerase J4G45_07820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4G45_07820 PF13378 Enolase C-terminal domain-like J4G45_07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_07825 PF03466 LysR substrate binding domain J4G45_07830 PF07690 Major Facilitator Superfamily J4G45_07840 PF00155 Aminotransferase class I and II J4G45_07840 PF00392 Bacterial regulatory proteins, gntR family J4G45_07865 PF01638 HxlR-like helix-turn-helix J4G45_07885 PF02635 DsrE/DsrF-like family J4G45_07890 PF16363 GDP-mannose 4,6 dehydratase J4G45_07895 PF10415 Fumarase C C-terminus J4G45_07895 PF00206 Lyase J4G45_07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_07915 PF03466 LysR substrate binding domain J4G45_07920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_07920 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_07920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_07935 PF00106 short chain dehydrogenase J4G45_07960 PF13091 PLD-like domain J4G45_07965 PF08240 Alcohol dehydrogenase GroES-like domain J4G45_07965 PF00107 Zinc-binding dehydrogenase J4G45_07970 PF00793 DAHP synthetase I family J4G45_07975 PF07690 Major Facilitator Superfamily J4G45_07980 PF01597 Glycine cleavage H-protein J4G45_07985 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G45_07985 PF12833 Helix-turn-helix domain J4G45_07990 PF00664 ABC transporter transmembrane region J4G45_07990 PF00005 ABC transporter J4G45_08005 PF01636 Phosphotransferase enzyme family J4G45_08015 PF00717 Peptidase S24-like J4G45_08020 PF13438 Domain of unknown function (DUF4113) J4G45_08020 PF00817 impB/mucB/samB family J4G45_08020 PF11799 impB/mucB/samB family C-terminal domain J4G45_08020 PF11798 IMS family HHH motif J4G45_08025 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system J4G45_08035 PF18381 YcaO cyclodehydratase C-terminal domain J4G45_08035 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J4G45_08040 PF02627 Carboxymuconolactone decarboxylase family J4G45_08050 PF13098 Thioredoxin-like domain J4G45_08055 PF08534 Redoxin J4G45_08060 PF11412 Disulphide bond corrector protein DsbC J4G45_08060 PF02683 Cytochrome C biogenesis protein transmembrane region J4G45_08065 PF00072 Response regulator receiver domain J4G45_08065 PF00486 Transcriptional regulatory protein, C terminal J4G45_08070 PF08521 Two-component sensor kinase N-terminal J4G45_08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_08070 PF00512 His Kinase A (phospho-acceptor) domain J4G45_08075 PF01220 Dehydroquinase class II J4G45_08080 PF00364 Biotin-requiring enzyme J4G45_08085 PF02785 Biotin carboxylase C-terminal domain J4G45_08085 PF00289 Biotin carboxylase, N-terminal domain J4G45_08085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G45_08090 PF12697 Alpha/beta hydrolase family J4G45_08095 PF00753 Metallo-beta-lactamase superfamily J4G45_08105 PF04143 Sulphur transport J4G45_08120 PF04073 Aminoacyl-tRNA editing domain J4G45_08125 PF02690 Na+/Pi-cotransporter J4G45_08175 PF02881 SRP54-type protein, helical bundle domain J4G45_08175 PF00448 SRP54-type protein, GTPase domain J4G45_08180 PF05193 Peptidase M16 inactive domain J4G45_08180 PF00675 Insulinase (Peptidase family M16) J4G45_08210 PF00571 CBS domain J4G45_08215 PF00291 Pyridoxal-phosphate dependent enzyme J4G45_08225 PF17862 AAA+ lid domain J4G45_08225 PF01434 Peptidase family M41 J4G45_08225 PF00004 ATPase family associated with various cellular activities (AAA) J4G45_08235 PF05166 YcgL domain J4G45_08240 PF00570 HRDC domain J4G45_08240 PF01612 3'-5' exonuclease J4G45_08245 PF02132 RecR protein J4G45_08245 PF13662 Toprim domain J4G45_08250 PF02575 YbaB/EbfC DNA-binding family J4G45_08255 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G45_08265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4G45_08265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4G45_08275 PF01230 HIT domain J4G45_08280 PF00267 Gram-negative porin J4G45_08300 PF09312 SurA N-terminal domain J4G45_08305 PF00216 Bacterial DNA-binding protein J4G45_08320 PF02082 Transcriptional regulator J4G45_08325 PF00266 Aminotransferase class-V J4G45_08330 PF01592 NifU-like N terminal domain J4G45_08335 PF01521 Iron-sulphur cluster biosynthesis J4G45_08340 PF07743 HSCB C-terminal oligomerisation domain J4G45_08340 PF00226 DnaJ domain J4G45_08345 PF00012 Hsp70 protein J4G45_08350 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G45_08355 PF00211 Adenylate and Guanylate cyclase catalytic domain J4G45_08365 PF00270 DEAD/DEAH box helicase J4G45_08365 PF17757 UvrB interaction domain J4G45_08365 PF02559 CarD-like/TRCF domain J4G45_08365 PF00271 Helicase conserved C-terminal domain J4G45_08365 PF03461 TRCF domain J4G45_08380 PF03737 Aldolase/RraA J4G45_08385 PF13460 NAD(P)H-binding J4G45_08390 PF01649 Ribosomal protein S20 J4G45_08395 PF00041 Fibronectin type III domain J4G45_08395 PF12561 ToxR activated gene A lipoprotein domain J4G45_08405 PF00459 Inositol monophosphatase family J4G45_08420 PF13419 Haloacid dehalogenase-like hydrolase J4G45_08425 PF01479 S4 domain J4G45_08430 PF00154 recA bacterial DNA recombination protein J4G45_08435 PF02631 RecX family J4G45_08450 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_08450 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4G45_08455 PF07977 FabA-like domain J4G45_08460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4G45_08460 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_08470 PF01103 Surface antigen J4G45_08470 PF07244 Surface antigen variable number repeat J4G45_08475 PF17820 PDZ domain J4G45_08475 PF02163 Peptidase family M50 J4G45_08475 PF13180 PDZ domain J4G45_08480 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4G45_08480 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4G45_08480 PF13288 DXP reductoisomerase C-terminal domain J4G45_08490 PF01255 Putative undecaprenyl diphosphate synthase J4G45_08495 PF01765 Ribosome recycling factor J4G45_08500 PF00696 Amino acid kinase family J4G45_08505 PF00919 Uncharacterized protein family UPF0004 J4G45_08505 PF18693 TRAM domain J4G45_08505 PF04055 Radical SAM superfamily J4G45_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_08510 PF00512 His Kinase A (phospho-acceptor) domain J4G45_08510 PF00989 PAS fold J4G45_08515 PF02954 Bacterial regulatory protein, Fis family J4G45_08515 PF00072 Response regulator receiver domain J4G45_08515 PF00158 Sigma-54 interaction domain J4G45_08525 PF13291 ACT domain J4G45_08525 PF02824 TGS domain J4G45_08525 PF04607 Region found in RelA / SpoT proteins J4G45_08530 PF03466 LysR substrate binding domain J4G45_08530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_08535 PF00557 Metallopeptidase family M24 J4G45_08540 PF05525 Branched-chain amino acid transport protein J4G45_08560 PF03471 Transporter associated domain J4G45_08560 PF03741 Integral membrane protein TerC family J4G45_08575 PF00171 Aldehyde dehydrogenase family J4G45_08580 PF01274 Malate synthase J4G45_08585 PF03969 AFG1-like ATPase J4G45_08590 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G45_08590 PF12833 Helix-turn-helix domain J4G45_08595 PF00743 Flavin-binding monooxygenase-like J4G45_08600 PF03956 Lysine exporter LysO J4G45_08605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4G45_08615 PF00216 Bacterial DNA-binding protein J4G45_08620 PF00575 S1 RNA binding domain J4G45_08625 PF02224 Cytidylate kinase J4G45_08635 PF14437 MafB19-like deaminase J4G45_08645 PF03167 Uracil DNA glycosylase superfamily J4G45_08655 PF03934 Type II secretion system (T2SS), protein K J4G45_08660 PF07963 Prokaryotic N-terminal methylation motif J4G45_08660 PF11612 Type II secretion system (T2SS), protein J J4G45_08665 PF07963 Prokaryotic N-terminal methylation motif J4G45_08665 PF02501 Type II secretion system (T2SS), protein I J4G45_08670 PF07963 Prokaryotic N-terminal methylation motif J4G45_08680 PF01026 TatD related DNase J4G45_08690 PF09115 DNA polymerase III, delta subunit, C terminal J4G45_08695 PF02348 Cytidylyltransferase J4G45_08700 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4G45_08705 PF00664 ABC transporter transmembrane region J4G45_08705 PF00005 ABC transporter J4G45_08715 PF01618 MotA/TolQ/ExbB proton channel family J4G45_08720 PF02195 ParB-like nuclease domain J4G45_08720 PF17762 HTH domain found in ParB protein J4G45_08725 PF13614 AAA domain J4G45_08730 PF02527 rRNA small subunit methyltransferase G J4G45_08735 PF00483 Nucleotidyl transferase J4G45_08740 PF01636 Phosphotransferase enzyme family J4G45_08745 PF03968 OstA-like protein J4G45_08745 PF04453 LPS transport system D J4G45_08750 PF00639 PPIC-type PPIASE domain J4G45_08750 PF09312 SurA N-terminal domain J4G45_08795 PF17209 Hfq protein J4G45_08805 PF08676 MutL C terminal dimerisation domain J4G45_08805 PF01119 DNA mismatch repair protein, C-terminal domain J4G45_08810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4G45_08815 PF01479 S4 domain J4G45_08815 PF00849 RNA pseudouridylate synthase J4G45_08830 PF13737 Transposase DDE domain J4G45_08835 PF01479 S4 domain J4G45_08835 PF00849 RNA pseudouridylate synthase J4G45_08840 PF04284 Protein of unknown function (DUF441) J4G45_08845 PF07690 Major Facilitator Superfamily J4G45_08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_08850 PF03466 LysR substrate binding domain J4G45_08855 PF00027 Cyclic nucleotide-binding domain J4G45_08855 PF00520 Ion transport protein J4G45_08860 PF14493 Helix-turn-helix domain J4G45_08860 PF05970 PIF1-like helicase J4G45_08870 PF00465 Iron-containing alcohol dehydrogenase J4G45_08885 PF00171 Aldehyde dehydrogenase family J4G45_08890 PF04264 YceI-like domain J4G45_08905 PF02779 Transketolase, pyrimidine binding domain J4G45_08905 PF02780 Transketolase, C-terminal domain J4G45_08905 PF00456 Transketolase, thiamine diphosphate binding domain J4G45_08910 PF02772 S-adenosylmethionine synthetase, central domain J4G45_08910 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4G45_08910 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4G45_08930 PF01810 LysE type translocator J4G45_08945 PF02075 Crossover junction endodeoxyribonuclease RuvC J4G45_08950 PF01256 Carbohydrate kinase J4G45_08950 PF03853 YjeF-related protein N-terminus J4G45_08955 PF08331 Domain of unknown function (DUF1730) J4G45_08960 PF06968 Biotin and Thiamin Synthesis associated domain J4G45_08960 PF04055 Radical SAM superfamily J4G45_08970 PF02654 Cobalamin-5-phosphate synthase J4G45_08980 PF02277 Phosphoribosyltransferase J4G45_08985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J4G45_08995 PF03848 Tellurite resistance protein TehB J4G45_08995 PF09313 Domain of unknown function (DUF1971) J4G45_09015 PF01709 Transcriptional regulator J4G45_09035 PF01926 50S ribosome-binding GTPase J4G45_09035 PF06071 Protein of unknown function (DUF933) J4G45_09045 PF03591 AzlC protein J4G45_09050 PF05437 Branched-chain amino acid transport protein (AzlD) J4G45_09055 PF02222 ATP-grasp domain J4G45_09060 PF01966 HD domain J4G45_09060 PF01909 Nucleotidyltransferase domain J4G45_09060 PF08335 GlnD PII-uridylyltransferase J4G45_09065 PF00155 Aminotransferase class I and II J4G45_09070 PF00255 Glutathione peroxidase J4G45_09075 PF01641 SelR domain J4G45_09080 PF00155 Aminotransferase class I and II J4G45_09085 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4G45_09085 PF00753 Metallo-beta-lactamase superfamily J4G45_09115 PF03793 PASTA domain J4G45_09115 PF00069 Protein kinase domain J4G45_09140 PF00814 Glycoprotease family J4G45_09145 PF01165 Ribosomal protein S21 J4G45_09150 PF09424 Yqey-like protein J4G45_09165 PF01435 Peptidase family M48 J4G45_09170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G45_09170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G45_09185 PF00156 Phosphoribosyl transferase domain J4G45_09190 PF02674 Colicin V production protein J4G45_09195 PF01180 Dihydroorotate dehydrogenase J4G45_09215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4G45_09215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4G45_09220 PF00881 Nitroreductase family J4G45_09230 PF00270 DEAD/DEAH box helicase J4G45_09230 PF00271 Helicase conserved C-terminal domain J4G45_09235 PF00313 'Cold-shock' DNA-binding domain J4G45_09245 PF00140 Sigma-70 factor, region 1.2 J4G45_09245 PF04545 Sigma-70, region 4 J4G45_09245 PF04542 Sigma-70 region 2 J4G45_09250 PF04241 Protein of unknown function (DUF423) J4G45_09260 PF05690 Thiazole biosynthesis protein ThiG J4G45_09265 PF02798 Glutathione S-transferase, N-terminal domain J4G45_09265 PF00043 Glutathione S-transferase, C-terminal domain J4G45_09270 PF00916 Sulfate permease family J4G45_09270 PF01740 STAS domain J4G45_09275 PF02390 Putative methyltransferase J4G45_09295 PF04055 Radical SAM superfamily J4G45_09295 PF06968 Biotin and Thiamin Synthesis associated domain J4G45_09300 PF13193 AMP-binding enzyme C-terminal domain J4G45_09300 PF00501 AMP-binding enzyme J4G45_09305 PF00440 Bacterial regulatory proteins, tetR family J4G45_09305 PF17925 Tetracyclin repressor-like, C-terminal domain J4G45_09310 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_09310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G45_09310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_09315 PF01039 Carboxyl transferase domain J4G45_09320 PF00378 Enoyl-CoA hydratase/isomerase J4G45_09325 PF02785 Biotin carboxylase C-terminal domain J4G45_09325 PF00289 Biotin carboxylase, N-terminal domain J4G45_09325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G45_09325 PF18140 Propionyl-coenzyme A carboxylase BT domain J4G45_09325 PF00364 Biotin-requiring enzyme J4G45_09330 PF00682 HMGL-like J4G45_09335 PF01144 Coenzyme A transferase J4G45_09340 PF01144 Coenzyme A transferase J4G45_09345 PF00691 OmpA family J4G45_09345 PF01389 OmpA-like transmembrane domain J4G45_09350 PF01979 Amidohydrolase family J4G45_09355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4G45_09355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4G45_09365 PF01170 Putative RNA methylase family UPF0020 J4G45_09365 PF10672 S-adenosylmethionine-dependent methyltransferase J4G45_09365 PF02926 THUMP domain J4G45_09375 PF00004 ATPase family associated with various cellular activities (AAA) J4G45_09375 PF07724 AAA domain (Cdc48 subfamily) J4G45_09375 PF17871 AAA lid domain J4G45_09375 PF02861 Clp amino terminal domain, pathogenicity island component J4G45_09375 PF10431 C-terminal, D2-small domain, of ClpB protein J4G45_09380 PF02566 OsmC-like protein J4G45_09385 PF00027 Cyclic nucleotide-binding domain J4G45_09385 PF13545 Crp-like helix-turn-helix domain J4G45_09390 PF00248 Aldo/keto reductase family J4G45_09405 PF00709 Adenylosuccinate synthetase J4G45_09410 PF13393 Histidyl-tRNA synthetase J4G45_09420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4G45_09420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4G45_09425 PF01411 tRNA synthetases class II (A) J4G45_09425 PF02272 DHHA1 domain J4G45_09425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4G45_09430 PF00696 Amino acid kinase family J4G45_09430 PF01842 ACT domain J4G45_09430 PF13840 ACT domain J4G45_09435 PF02599 Global regulator protein family J4G45_09440 PF01351 Ribonuclease HII J4G45_09455 PF00962 Adenosine/AMP deaminase J4G45_09460 PF00860 Permease family J4G45_09480 PF13559 Domain of unknown function (DUF4129) J4G45_09480 PF11992 Domain of unknown function (DUF3488) J4G45_09480 PF01841 Transglutaminase-like superfamily J4G45_09490 PF07726 ATPase family associated with various cellular activities (AAA) J4G45_09490 PF17863 AAA lid domain J4G45_09495 PF04328 Selenoprotein, putative J4G45_09500 PF02554 Carbon starvation protein CstA J4G45_09500 PF13722 5TM C-terminal transporter carbon starvation CstA J4G45_09505 PF08207 Elongation factor P (EF-P) KOW-like domain J4G45_09505 PF09285 Elongation factor P, C-terminal J4G45_09505 PF01132 Elongation factor P (EF-P) OB domain J4G45_09510 PF04055 Radical SAM superfamily J4G45_09525 PF01197 Ribosomal protein L31 J4G45_09530 PF13593 SBF-like CPA transporter family (DUF4137) J4G45_09535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4G45_09540 PF07690 Major Facilitator Superfamily J4G45_09545 PF05362 Lon protease (S16) C-terminal proteolytic domain J4G45_09545 PF13654 AAA domain J4G45_09550 PF00462 Glutaredoxin J4G45_09555 PF00202 Aminotransferase class-III J4G45_09560 PF03466 LysR substrate binding domain J4G45_09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_09565 PF01551 Peptidase family M23 J4G45_09565 PF01476 LysM domain J4G45_09570 PF01975 Survival protein SurE J4G45_09585 PF00768 D-alanyl-D-alanine carboxypeptidase J4G45_09585 PF07943 Penicillin-binding protein 5, C-terminal domain J4G45_09590 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_09600 PF00293 NUDIX domain J4G45_09610 PF04356 Protein of unknown function (DUF489) J4G45_09615 PF08328 Adenylosuccinate lyase C-terminal J4G45_09615 PF00206 Lyase J4G45_09630 PF01343 Peptidase family S49 J4G45_09630 PF08496 Peptidase family S49 N-terminal J4G45_09640 PF00005 ABC transporter J4G45_09645 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_09650 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_09660 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4G45_09665 PF00202 Aminotransferase class-III J4G45_09675 PF00696 Amino acid kinase family J4G45_09675 PF01472 PUA domain J4G45_09680 PF01018 GTP1/OBG J4G45_09680 PF01926 50S ribosome-binding GTPase J4G45_09690 PF07690 Major Facilitator Superfamily J4G45_09695 PF01638 HxlR-like helix-turn-helix J4G45_09700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4G45_09700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4G45_09705 PF00892 EamA-like transporter family J4G45_09715 PF00271 Helicase conserved C-terminal domain J4G45_09715 PF04851 Type III restriction enzyme, res subunit J4G45_09715 PF12344 Ultra-violet resistance protein B J4G45_09715 PF17757 UvrB interaction domain J4G45_09715 PF02151 UvrB/uvrC motif J4G45_09730 PF00155 Aminotransferase class I and II J4G45_09735 PF00892 EamA-like transporter family J4G45_09750 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4G45_09755 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4G45_09760 PF02565 Recombination protein O C terminal J4G45_09760 PF11967 Recombination protein O N terminal J4G45_09770 PF01926 50S ribosome-binding GTPase J4G45_09770 PF07650 KH domain J4G45_09775 PF14622 Ribonuclease-III-like J4G45_09775 PF00035 Double-stranded RNA binding motif J4G45_09785 PF10502 Signal peptidase, peptidase S26 J4G45_09790 PF00679 Elongation factor G C-terminus J4G45_09790 PF00009 Elongation factor Tu GTP binding domain J4G45_09790 PF03144 Elongation factor Tu domain 2 J4G45_09790 PF06421 GTP-binding protein LepA C-terminus J4G45_09800 PF13180 PDZ domain J4G45_09805 PF00890 FAD binding domain J4G45_09805 PF02910 Fumarate reductase flavoprotein C-term J4G45_09810 PF13419 Haloacid dehalogenase-like hydrolase J4G45_09820 PF02223 Thymidylate kinase J4G45_09825 PF02618 YceG-like family J4G45_09845 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_09850 PF00528 Binding-protein-dependent transport system inner membrane component J4G45_09855 PF00005 ABC transporter J4G45_09855 PF12857 TOBE-like domain J4G45_09860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_09860 PF03466 LysR substrate binding domain J4G45_09875 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_09875 PF14602 Hexapeptide repeat of succinyl-transferase J4G45_09875 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J4G45_09885 PF06508 Queuosine biosynthesis protein QueC J4G45_09895 PF00578 AhpC/TSA family J4G45_09900 PF01467 Cytidylyltransferase-like J4G45_09900 PF00293 NUDIX domain J4G45_09905 PF00378 Enoyl-CoA hydratase/isomerase J4G45_09910 PF00881 Nitroreductase family J4G45_09915 PF01784 NIF3 (NGG1p interacting factor 3) J4G45_09920 PF01966 HD domain J4G45_09925 PF01330 RuvA N terminal domain J4G45_09925 PF07499 RuvA, C-terminal domain J4G45_09930 PF05491 RuvB C-terminal winged helix domain J4G45_09930 PF17864 RuvB AAA lid domain J4G45_09930 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4G45_09940 PF03061 Thioesterase superfamily J4G45_09945 PF01618 MotA/TolQ/ExbB proton channel family J4G45_09950 PF02472 Biopolymer transport protein ExbD/TolR J4G45_09960 PF07676 WD40-like Beta Propeller Repeat J4G45_09960 PF04052 TolB amino-terminal domain J4G45_09965 PF00691 OmpA family J4G45_09975 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4G45_09980 PF00588 SpoU rRNA Methylase family J4G45_09980 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4G45_10010 PF00308 Bacterial dnaA protein J4G45_10010 PF08299 Bacterial dnaA protein helix-turn-helix J4G45_10010 PF11638 DnaA N-terminal domain J4G45_10015 PF01594 AI-2E family transporter J4G45_10020 PF00586 AIR synthase related protein, N-terminal domain J4G45_10020 PF02769 AIR synthase related protein, C-terminal domain J4G45_10025 PF00551 Formyl transferase J4G45_10035 PF06965 Na+/H+ antiporter 1 J4G45_10035 PF01343 Peptidase family S49 J4G45_10045 PF03772 Competence protein J4G45_10045 PF13567 Domain of unknown function (DUF4131) J4G45_10045 PF00753 Metallo-beta-lactamase superfamily J4G45_10055 PF00005 ABC transporter J4G45_10060 PF02687 FtsX-like permease family J4G45_10060 PF12704 MacB-like periplasmic core domain J4G45_10075 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4G45_10090 PF00266 Aminotransferase class-V J4G45_10115 PF13533 Biotin-lipoyl like J4G45_10135 PF03989 DNA gyrase C-terminal domain, beta-propeller J4G45_10135 PF00521 DNA gyrase/topoisomerase IV, subunit A J4G45_10140 PF00766 Electron transfer flavoprotein FAD-binding domain J4G45_10140 PF01012 Electron transfer flavoprotein domain J4G45_10145 PF01012 Electron transfer flavoprotein domain J4G45_10155 PF00589 Phage integrase family J4G45_10155 PF02899 Phage integrase, N-terminal SAM-like domain J4G45_10160 PF00561 alpha/beta hydrolase fold J4G45_10165 PF01678 Diaminopimelate epimerase J4G45_10170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4G45_10170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4G45_10180 PF01235 Sodium:alanine symporter family J4G45_10185 PF18073 Rubredoxin metal binding domain J4G45_10195 PF17820 PDZ domain J4G45_10195 PF13180 PDZ domain J4G45_10200 PF01784 NIF3 (NGG1p interacting factor 3) J4G45_10205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4G45_10205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4G45_10240 PF01040 UbiA prenyltransferase family J4G45_10245 PF04345 Chorismate lyase J4G45_10250 PF03951 Glutamine synthetase, beta-Grasp domain J4G45_10250 PF00120 Glutamine synthetase, catalytic domain J4G45_10255 PF00117 Glutamine amidotransferase class-I J4G45_10260 PF00591 Glycosyl transferase family, a/b domain J4G45_10260 PF02885 Glycosyl transferase family, helical bundle domain J4G45_10265 PF00218 Indole-3-glycerol phosphate synthase J4G45_10275 PF01227 GTP cyclohydrolase I J4G45_10280 PF00990 Diguanylate cyclase, GGDEF domain J4G45_10295 PF05675 Protein of unknown function (DUF817) J4G45_10300 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4G45_10310 PF02678 Pirin J4G45_10310 PF17954 Quercetinase C-terminal cupin domain J4G45_10325 PF00775 Dioxygenase J4G45_10325 PF04444 Catechol dioxygenase N terminus J4G45_10330 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G45_10330 PF00175 Oxidoreductase NAD-binding domain J4G45_10330 PF00970 Oxidoreductase FAD-binding domain J4G45_10340 PF02332 Methane/Phenol/Toluene Hydroxylase J4G45_10340 PF04945 YHS domain J4G45_10345 PF02406 MmoB/DmpM family J4G45_10350 PF02332 Methane/Phenol/Toluene Hydroxylase J4G45_10355 PF06099 Phenol hydroxylase subunit J4G45_10360 PF00158 Sigma-54 interaction domain J4G45_10360 PF06505 Activator of aromatic catabolism J4G45_10360 PF02954 Bacterial regulatory protein, Fis family J4G45_10360 PF02830 V4R domain J4G45_10395 PF00009 Elongation factor Tu GTP binding domain J4G45_10400 PF01507 Phosphoadenosine phosphosulfate reductase family J4G45_10410 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB J4G45_10415 PF01381 Helix-turn-helix J4G45_10420 PF01336 OB-fold nucleic acid binding domain J4G45_10420 PF00152 tRNA synthetases class II (D, K and N) J4G45_10430 PF00156 Phosphoribosyl transferase domain J4G45_10435 PF00301 Rubredoxin J4G45_10440 PF18113 Rubredoxin binding C-terminal domain J4G45_10440 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_10445 PF00561 alpha/beta hydrolase fold J4G45_10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_10450 PF03466 LysR substrate binding domain J4G45_10460 PF13090 Polyphosphate kinase C-terminal domain 2 J4G45_10460 PF13089 Polyphosphate kinase N-terminal domain J4G45_10460 PF17941 Polyphosphate kinase C-terminal domain 1 J4G45_10460 PF02503 Polyphosphate kinase middle domain J4G45_10465 PF00912 Transglycosylase J4G45_10470 PF01694 Rhomboid family J4G45_10480 PF00005 ABC transporter J4G45_10485 PF13472 GDSL-like Lipase/Acylhydrolase family J4G45_10490 PF00484 Carbonic anhydrase J4G45_10495 PF00561 alpha/beta hydrolase fold J4G45_10505 PF01521 Iron-sulphur cluster biosynthesis J4G45_10505 PF01106 NifU-like domain J4G45_10525 PF01384 Phosphate transporter family J4G45_10530 PF00809 Pterin binding enzyme J4G45_10530 PF02574 Homocysteine S-methyltransferase J4G45_10530 PF02310 B12 binding domain J4G45_10530 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4G45_10530 PF02607 B12 binding domain J4G45_10550 PF03449 Transcription elongation factor, N-terminal J4G45_10550 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G45_10555 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4G45_10555 PF01464 Transglycosylase SLT domain J4G45_10565 PF01171 PP-loop family J4G45_10570 PF10145 Phage-related minor tail protein J4G45_10570 PF01464 Transglycosylase SLT domain J4G45_10570 PF01551 Peptidase family M23 J4G45_10575 PF01435 Peptidase family M48 J4G45_10585 PF03448 MgtE intracellular N domain J4G45_10585 PF01769 Divalent cation transporter J4G45_10585 PF00571 CBS domain J4G45_10590 PF00873 AcrB/AcrD/AcrF family J4G45_10605 PF00118 TCP-1/cpn60 chaperonin family J4G45_10610 PF00166 Chaperonin 10 Kd subunit J4G45_10615 PF00149 Calcineurin-like phosphoesterase J4G45_10620 PF00781 Diacylglycerol kinase catalytic domain J4G45_10625 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain J4G45_10625 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain J4G45_10640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4G45_10640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4G45_10660 PF16655 PhoD-like phosphatase, N-terminal domain J4G45_10660 PF09423 PhoD-like phosphatase J4G45_10680 PF00809 Pterin binding enzyme J4G45_10685 PF01434 Peptidase family M41 J4G45_10685 PF06480 FtsH Extracellular J4G45_10685 PF17862 AAA+ lid domain J4G45_10685 PF00004 ATPase family associated with various cellular activities (AAA) J4G45_10690 PF01728 FtsJ-like methyltransferase J4G45_10695 PF01985 CRS1 / YhbY (CRM) domain J4G45_10710 PF00117 Glutamine amidotransferase class-I J4G45_10710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4G45_10715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4G45_10715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G45_10715 PF02142 MGS-like domain J4G45_10720 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G45_10720 PF03449 Transcription elongation factor, N-terminal J4G45_10730 PF00132 Bacterial transferase hexapeptide (six repeats) J4G45_10735 PF00582 Universal stress protein family J4G45_10740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4G45_10745 PF04228 Putative neutral zinc metallopeptidase J4G45_10750 PF05661 Protein of unknown function (DUF808) J4G45_10755 PF00579 tRNA synthetases class I (W and Y) J4G45_10760 PF14883 Hypothetical glycosyl hydrolase family 13 J4G45_10760 PF01522 Polysaccharide deacetylase J4G45_10770 PF00535 Glycosyl transferase family 2 J4G45_10775 PF01522 Polysaccharide deacetylase J4G45_10775 PF14883 Hypothetical glycosyl hydrolase family 13 J4G45_10785 PF02629 CoA binding domain J4G45_10785 PF00549 CoA-ligase J4G45_10790 PF08442 ATP-grasp domain J4G45_10790 PF00549 CoA-ligase J4G45_10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_10795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G45_10800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4G45_10800 PF00364 Biotin-requiring enzyme J4G45_10800 PF02817 e3 binding domain J4G45_10805 PF16078 2-oxoglutarate dehydrogenase N-terminus J4G45_10805 PF16870 2-oxoglutarate dehydrogenase C-terminal J4G45_10805 PF02779 Transketolase, pyrimidine binding domain J4G45_10805 PF00676 Dehydrogenase E1 component J4G45_10810 PF13085 2Fe-2S iron-sulfur cluster binding domain J4G45_10815 PF02910 Fumarate reductase flavoprotein C-term J4G45_10815 PF00890 FAD binding domain J4G45_10820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4G45_10825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4G45_10830 PF00285 Citrate synthase, C-terminal domain J4G45_10835 PF04717 Type VI secretion system, phage-baseplate injector J4G45_10835 PF13296 Putative type VI secretion system Rhs element Vgr J4G45_10835 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J4G45_10840 PF00795 Carbon-nitrogen hydrolase J4G45_10840 PF02540 NAD synthase J4G45_10865 PF00037 4Fe-4S binding domain J4G45_10870 PF01467 Cytidylyltransferase-like J4G45_10875 PF01668 SmpB protein J4G45_10880 PF03358 NADPH-dependent FMN reductase J4G45_10885 PF02578 Multi-copper polyphenol oxidoreductase laccase J4G45_10890 PF00849 RNA pseudouridylate synthase J4G45_10890 PF01479 S4 domain J4G45_10895 PF13525 Outer membrane lipoprotein J4G45_10900 PF10410 DnaB-helicase binding domain of primase J4G45_10900 PF08278 DNA primase DnaG DnaB-binding J4G45_10900 PF08275 DNA primase catalytic core, N-terminal domain J4G45_10900 PF01807 CHC2 zinc finger J4G45_10905 PF01488 Shikimate / quinate 5-dehydrogenase J4G45_10905 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4G45_10905 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4G45_10915 PF03550 Outer membrane lipoprotein LolB J4G45_10920 PF00288 GHMP kinases N terminal domain J4G45_10920 PF08544 GHMP kinases C terminal J4G45_10945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4G45_10945 PF14572 Phosphoribosyl synthetase-associated domain J4G45_10950 PF01386 Ribosomal L25p family J4G45_10955 PF01195 Peptidyl-tRNA hydrolase J4G45_10960 PF02261 Aspartate decarboxylase J4G45_10970 PF17773 UPF0176 acylphosphatase like domain J4G45_10970 PF00581 Rhodanese-like domain J4G45_10980 PF09335 SNARE associated Golgi protein J4G45_11005 PF03979 Sigma-70 factor, region 1.1 J4G45_11005 PF00140 Sigma-70 factor, region 1.2 J4G45_11005 PF04542 Sigma-70 region 2 J4G45_11005 PF04539 Sigma-70 region 3 J4G45_11005 PF04545 Sigma-70, region 4 J4G45_11005 PF04546 Sigma-70, non-essential region J4G45_11010 PF04359 Protein of unknown function (DUF493) J4G45_11015 PF03099 Biotin/lipoate A/B protein ligase family J4G45_11025 PF00465 Iron-containing alcohol dehydrogenase J4G45_11030 PF13520 Amino acid permease J4G45_11035 PF00588 SpoU rRNA Methylase family J4G45_11040 PF10414 Sirohaem synthase dimerisation region J4G45_11040 PF14824 Sirohaem biosynthesis protein central J4G45_11040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4G45_11045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G45_11045 PF02403 Seryl-tRNA synthetase N-terminal domain J4G45_11055 PF03548 Outer membrane lipoprotein carrier protein LolA J4G45_11060 PF01016 Ribosomal L27 protein J4G45_11065 PF00829 Ribosomal prokaryotic L21 protein J4G45_11070 PF00348 Polyprenyl synthetase J4G45_11080 PF01569 PAP2 superfamily J4G45_11085 PF00529 HlyD membrane-fusion protein of T1SS J4G45_11085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G45_11090 PF00873 AcrB/AcrD/AcrF family J4G45_11095 PF02321 Outer membrane efflux protein J4G45_11100 PF01906 Putative heavy-metal-binding J4G45_11105 PF01906 Putative heavy-metal-binding J4G45_11130 PF08264 Anticodon-binding domain of tRNA J4G45_11130 PF10458 Valyl tRNA synthetase tRNA binding arm J4G45_11130 PF00133 tRNA synthetases class I (I, L, M and V) J4G45_11140 PF13936 Helix-turn-helix domain J4G45_11140 PF00665 Integrase core domain J4G45_11150 PF04480 Protein of unknown function (DUF559) J4G45_11155 PF04239 Protein of unknown function (DUF421) J4G45_11170 PF01734 Patatin-like phospholipase J4G45_11180 PF01145 SPFH domain / Band 7 family J4G45_11185 PF00474 Sodium:solute symporter family J4G45_11190 PF00672 HAMP domain J4G45_11190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_11190 PF00512 His Kinase A (phospho-acceptor) domain J4G45_11195 PF00072 Response regulator receiver domain J4G45_11195 PF00486 Transcriptional regulatory protein, C terminal J4G45_11200 PF03477 ATP cone domain J4G45_11200 PF00317 Ribonucleotide reductase, all-alpha domain J4G45_11200 PF02867 Ribonucleotide reductase, barrel domain J4G45_11205 PF00268 Ribonucleotide reductase, small chain J4G45_11220 PF04972 BON domain J4G45_11220 PF01476 LysM domain J4G45_11225 PF00550 Phosphopantetheine attachment site J4G45_11235 PF00698 Acyl transferase domain J4G45_11240 PF01783 Ribosomal L32p protein family J4G45_11245 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4G45_11250 PF04315 Elongation factor P hydroxylase J4G45_11255 PF01300 Telomere recombination J4G45_11265 PF02616 Segregation and condensation protein ScpA J4G45_11270 PF04079 Segregation and condensation complex subunit ScpB J4G45_11275 PF01479 S4 domain J4G45_11275 PF00849 RNA pseudouridylate synthase J4G45_11290 PF00155 Aminotransferase class I and II J4G45_11295 PF04055 Radical SAM superfamily J4G45_11295 PF06968 Biotin and Thiamin Synthesis associated domain J4G45_11295 PF00202 Aminotransferase class-III J4G45_11300 PF08241 Methyltransferase domain J4G45_11300 PF12697 Alpha/beta hydrolase family J4G45_11305 PF00210 Ferritin-like domain J4G45_11310 PF16363 GDP-mannose 4,6 dehydratase J4G45_11315 PF12826 Helix-hairpin-helix motif J4G45_11315 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4G45_11315 PF01653 NAD-dependent DNA ligase adenylation domain J4G45_11315 PF00533 BRCA1 C Terminus (BRCT) domain J4G45_11315 PF03120 NAD-dependent DNA ligase OB-fold domain J4G45_11320 PF04354 ZipA, C-terminal FtsZ-binding domain J4G45_11325 PF02463 RecF/RecN/SMC N terminal domain J4G45_11325 PF06470 SMC proteins Flexible Hinge Domain J4G45_11335 PF01925 Sulfite exporter TauE/SafE J4G45_11345 PF03309 Type III pantothenate kinase J4G45_11350 PF02978 Signal peptide binding domain J4G45_11350 PF02881 SRP54-type protein, helical bundle domain J4G45_11350 PF00448 SRP54-type protein, GTPase domain J4G45_11360 PF01207 Dihydrouridine synthase (Dus) J4G45_11370 PF07411 Domain of unknown function (DUF1508) J4G45_11375 PF08274 PhnA Zinc-Ribbon J4G45_11375 PF03831 PhnA domain J4G45_11380 PF04343 Protein of unknown function, DUF488 J4G45_11395 PF00849 RNA pseudouridylate synthase J4G45_11420 PF01850 PIN domain J4G45_11425 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4G45_11430 PF00330 Aconitase family (aconitate hydratase) J4G45_11430 PF00694 Aconitase C-terminal domain J4G45_11435 PF01571 Aminomethyltransferase folate-binding domain J4G45_11450 PF01385 Probable transposase J4G45_11450 PF07282 Putative transposase DNA-binding domain J4G45_11450 PF12323 Helix-turn-helix domain J4G45_11460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G45_11465 PF06827 Zinc finger found in FPG and IleRS J4G45_11465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4G45_11465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4G45_11475 PF01741 Large-conductance mechanosensitive channel, MscL J4G45_11480 PF00679 Elongation factor G C-terminus J4G45_11480 PF00009 Elongation factor Tu GTP binding domain J4G45_11480 PF03144 Elongation factor Tu domain 2 J4G45_11485 PF00860 Permease family J4G45_11490 PF05175 Methyltransferase small domain J4G45_11490 PF08468 Methyltransferase small domain N-terminal J4G45_11495 PF00324 Amino acid permease J4G45_11500 PF00691 OmpA family J4G45_11500 PF13505 Outer membrane protein beta-barrel domain J4G45_11510 PF02803 Thiolase, C-terminal domain J4G45_11510 PF00108 Thiolase, N-terminal domain J4G45_11515 PF01113 Dihydrodipicolinate reductase, N-terminus J4G45_11515 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain J4G45_11525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4G45_11525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4G45_11530 PF02515 CoA-transferase family III J4G45_11535 PF02311 AraC-like ligand binding domain J4G45_11535 PF12833 Helix-turn-helix domain J4G45_11540 PF02803 Thiolase, C-terminal domain J4G45_11540 PF00108 Thiolase, N-terminal domain J4G45_11545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4G45_11545 PF00378 Enoyl-CoA hydratase/isomerase J4G45_11545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4G45_11555 PF13673 Acetyltransferase (GNAT) domain J4G45_11565 PF03006 Haemolysin-III related J4G45_11570 PF07690 Major Facilitator Superfamily J4G45_11570 PF00083 Sugar (and other) transporter J4G45_11575 PF00149 Calcineurin-like phosphoesterase J4G45_11575 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4G45_11580 PF13091 PLD-like domain J4G45_11590 PF16360 GTP-binding GTPase Middle Region J4G45_11590 PF01926 50S ribosome-binding GTPase J4G45_11590 PF13167 GTP-binding GTPase N-terminal J4G45_11620 PF00149 Calcineurin-like phosphoesterase J4G45_11625 PF00398 Ribosomal RNA adenine dimethylase J4G45_11630 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4G45_11640 PF00572 Ribosomal protein L13 J4G45_11645 PF00380 Ribosomal protein S9/S16 J4G45_11650 PF00043 Glutathione S-transferase, C-terminal domain J4G45_11650 PF02798 Glutathione S-transferase, N-terminal domain J4G45_11655 PF04386 Stringent starvation protein B J4G45_11695 PF00563 EAL domain J4G45_11695 PF03707 Bacterial signalling protein N terminal repeat J4G45_11695 PF00990 Diguanylate cyclase, GGDEF domain J4G45_11700 PF00691 OmpA family J4G45_11725 PF02445 Quinolinate synthetase A protein J4G45_11730 PF01960 ArgJ family J4G45_11740 PF07516 SecA Wing and Scaffold domain J4G45_11740 PF02810 SEC-C motif J4G45_11740 PF07517 SecA DEAD-like domain J4G45_11740 PF01043 SecA preprotein cross-linking domain J4G45_11745 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G45_11745 PF00578 AhpC/TSA family J4G45_11755 PF08245 Mur ligase middle domain J4G45_11755 PF02875 Mur ligase family, glutamate ligase domain J4G45_11760 PF01039 Carboxyl transferase domain J4G45_11765 PF00290 Tryptophan synthase alpha chain J4G45_11770 PF12833 Helix-turn-helix domain J4G45_11770 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G45_11780 PF00929 Exonuclease J4G45_11785 PF03193 RsgA GTPase J4G45_11795 PF00462 Glutaredoxin J4G45_11800 PF02556 Preprotein translocase subunit SecB J4G45_11805 PF02441 Flavoprotein J4G45_11805 PF04127 DNA / pantothenate metabolism flavoprotein J4G45_11810 PF04002 RadC-like JAB domain J4G45_11815 PF01062 Bestrophin, RFP-TM, chloride channel J4G45_11825 PF04279 Intracellular septation protein A J4G45_11830 PF03795 YCII-related domain J4G45_11840 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4G45_11840 PF01266 FAD dependent oxidoreductase J4G45_11850 PF04461 Protein of unknown function (DUF520) J4G45_11860 PF03061 Thioesterase superfamily J4G45_11865 PF00085 Thioredoxin J4G45_11875 PF04273 Putative phosphatase (DUF442) J4G45_11875 PF00753 Metallo-beta-lactamase superfamily J4G45_11890 PF00403 Heavy-metal-associated domain J4G45_11890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G45_11890 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_11925 PF01066 CDP-alcohol phosphatidyltransferase J4G45_11930 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4G45_11955 PF04143 Sulphur transport J4G45_11960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4G45_11960 PF00056 lactate/malate dehydrogenase, NAD binding domain J4G45_11970 PF10145 Phage-related minor tail protein J4G45_11970 PF01551 Peptidase family M23 J4G45_11970 PF01464 Transglycosylase SLT domain J4G45_11975 PF01938 TRAM domain J4G45_11975 PF00919 Uncharacterized protein family UPF0004 J4G45_11975 PF04055 Radical SAM superfamily J4G45_11980 PF02562 PhoH-like protein J4G45_11985 PF02130 Uncharacterized protein family UPF0054 J4G45_12020 PF03358 NADPH-dependent FMN reductase J4G45_12025 PF03631 Virulence factor BrkB J4G45_12040 PF01618 MotA/TolQ/ExbB proton channel family J4G45_12050 PF00551 Formyl transferase J4G45_12050 PF01842 ACT domain J4G45_12055 PF00440 Bacterial regulatory proteins, tetR family J4G45_12055 PF08360 QacR-like protein, C-terminal region J4G45_12060 PF00171 Aldehyde dehydrogenase family J4G45_12065 PF00830 Ribosomal L28 family J4G45_12070 PF00471 Ribosomal protein L33 J4G45_12075 PF02254 TrkA-N domain J4G45_12075 PF00999 Sodium/hydrogen exchanger family J4G45_12090 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J4G45_12095 PF13361 UvrD-like helicase C-terminal domain J4G45_12095 PF00580 UvrD/REP helicase N-terminal domain J4G45_12105 PF08272 Topoisomerase I zinc-ribbon-like J4G45_12105 PF01751 Toprim domain J4G45_12105 PF01131 DNA topoisomerase J4G45_12105 PF01396 Topoisomerase DNA binding C4 zinc finger J4G45_12120 PF04102 SlyX J4G45_12125 PF00005 ABC transporter J4G45_12125 PF16326 ABC transporter C-terminal domain J4G45_12125 PF12848 ABC transporter J4G45_12130 PF03279 Bacterial lipid A biosynthesis acyltransferase J4G45_12145 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G45_12145 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4G45_12160 PF00710 Asparaginase, N-terminal J4G45_12160 PF17763 Glutaminase/Asparaginase C-terminal domain J4G45_12165 PF01416 tRNA pseudouridine synthase J4G45_12175 PF01176 Translation initiation factor 1A / IF-1 J4G45_12185 PF00180 Isocitrate/isopropylmalate dehydrogenase J4G45_12195 PF00694 Aconitase C-terminal domain J4G45_12200 PF00330 Aconitase family (aconitate hydratase) J4G45_12215 PF03466 LysR substrate binding domain J4G45_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_12230 PF00293 NUDIX domain J4G45_12235 PF05524 PEP-utilising enzyme, N-terminal J4G45_12235 PF01590 GAF domain J4G45_12235 PF00391 PEP-utilising enzyme, mobile domain J4G45_12235 PF02896 PEP-utilising enzyme, TIM barrel domain J4G45_12250 PF02770 Acyl-CoA dehydrogenase, middle domain J4G45_12250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G45_12250 PF18158 Adaptive response protein AidB N-terminal domain J4G45_12260 PF00199 Catalase J4G45_12260 PF06628 Catalase-related immune-responsive J4G45_12275 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_12275 PF14759 Reductase C-terminal J4G45_12280 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4G45_12285 PF00106 short chain dehydrogenase J4G45_12290 PF00355 Rieske [2Fe-2S] domain J4G45_12295 PF00866 Ring hydroxylating beta subunit J4G45_12300 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4G45_12300 PF00355 Rieske [2Fe-2S] domain J4G45_12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G45_12305 PF03466 LysR substrate binding domain J4G45_12315 PF00561 alpha/beta hydrolase fold J4G45_12320 PF03573 outer membrane porin, OprD family J4G45_12325 PF07836 DmpG-like communication domain J4G45_12325 PF00682 HMGL-like J4G45_12330 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation J4G45_12330 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G45_12335 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4G45_12340 PF13419 Haloacid dehalogenase-like hydrolase J4G45_12345 PF00849 RNA pseudouridylate synthase J4G45_12345 PF01479 S4 domain J4G45_12350 PF10150 Ribonuclease E/G family J4G45_12350 PF00575 S1 RNA binding domain J4G45_12350 PF12111 Polyribonucleotide phosphorylase C terminal J4G45_12355 PF13193 AMP-binding enzyme C-terminal domain J4G45_12355 PF00501 AMP-binding enzyme J4G45_12380 PF04024 PspC domain J4G45_12385 PF00571 CBS domain J4G45_12390 PF02091 Glycyl-tRNA synthetase alpha subunit J4G45_12395 PF02092 Glycyl-tRNA synthetase beta subunit J4G45_12395 PF05746 DALR anticodon binding domain J4G45_12400 PF14622 Ribonuclease-III-like J4G45_12400 PF00035 Double-stranded RNA binding motif J4G45_12425 PF08241 Methyltransferase domain J4G45_12435 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G45_12435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4G45_12445 PF03884 DNA gyrase inhibitor YacG J4G45_12450 PF00753 Metallo-beta-lactamase superfamily J4G45_12455 PF00762 Ferrochelatase J4G45_12465 PF01177 Asp/Glu/Hydantoin racemase J4G45_12495 PF01206 Sulfurtransferase TusA J4G45_12500 PF00571 CBS domain J4G45_12500 PF03471 Transporter associated domain J4G45_12505 PF00795 Carbon-nitrogen hydrolase J4G45_12510 PF08334 Type II secretion system (T2SS), protein G J4G45_12510 PF07963 Prokaryotic N-terminal methylation motif J4G45_12515 PF00482 Type II secretion system (T2SS), protein F J4G45_12520 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4G45_12520 PF18074 Primosomal protein N C-terminal domain J4G45_12520 PF17764 3′ DNA-binding domain (3′BD) J4G45_12520 PF00271 Helicase conserved C-terminal domain J4G45_12520 PF00270 DEAD/DEAH box helicase J4G45_12525 PF02254 TrkA-N domain J4G45_12525 PF00999 Sodium/hydrogen exchanger family J4G45_12530 PF01430 Hsp33 protein J4G45_12560 PF01138 3' exoribonuclease family, domain 1 J4G45_12560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4G45_12560 PF00575 S1 RNA binding domain J4G45_12560 PF03725 3' exoribonuclease family, domain 2 J4G45_12560 PF00013 KH domain J4G45_12565 PF00312 Ribosomal protein S15 J4G45_12570 PF13538 UvrD-like helicase C-terminal domain J4G45_12575 PF13361 UvrD-like helicase C-terminal domain J4G45_12575 PF00580 UvrD/REP helicase N-terminal domain J4G45_12575 PF12705 PD-(D/E)XK nuclease superfamily J4G45_12580 PF17946 RecC C-terminal domain J4G45_12590 PF03976 Polyphosphate kinase 2 (PPK2) J4G45_12600 PF01209 ubiE/COQ5 methyltransferase family J4G45_12610 PF03109 ABC1 family J4G45_12620 PF01502 Phosphoribosyl-AMP cyclohydrolase J4G45_12635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4G45_12635 PF00361 Proton-conducting membrane transporter J4G45_12635 PF13244 Domain of unknown function (DUF4040) J4G45_12635 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4G45_12640 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4G45_12645 PF00361 Proton-conducting membrane transporter J4G45_12650 PF01899 Na+/H+ ion antiporter subunit J4G45_12655 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4G45_12660 PF03334 Na+/H+ antiporter subunit J4G45_12665 PF02033 Ribosome-binding factor A J4G45_12670 PF08364 Bacterial translation initiation factor IF-2 associated region J4G45_12670 PF11987 Translation-initiation factor 2 J4G45_12670 PF00009 Elongation factor Tu GTP binding domain J4G45_12670 PF04760 Translation initiation factor IF-2, N-terminal region J4G45_12675 PF00575 S1 RNA binding domain J4G45_12675 PF08529 NusA N-terminal domain J4G45_12675 PF13184 NusA-like KH domain J4G45_12680 PF17384 RimP C-terminal SH3 domain J4G45_12680 PF02576 RimP N-terminal domain J4G45_12705 PF03840 Preprotein translocase SecG subunit J4G45_12710 PF00121 Triosephosphate isomerase J4G45_12715 PF00437 Type II/IV secretion system protein J4G45_12715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4G45_12720 PF00482 Type II secretion system (T2SS), protein F J4G45_12725 PF01478 Type IV leader peptidase family J4G45_12725 PF06750 Bacterial Peptidase A24 N-terminal domain J4G45_12730 PF01121 Dephospho-CoA kinase J4G45_12740 PF00588 SpoU rRNA Methylase family J4G45_12740 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4G45_12745 PF06865 Pyrimidine/purine nucleoside phosphorylase J4G45_12750 PF02463 RecF/RecN/SMC N terminal domain J4G45_12775 PF02622 Uncharacterized ACR, COG1678 J4G45_12780 PF03652 Holliday junction resolvase J4G45_12795 PF00664 ABC transporter transmembrane region J4G45_12795 PF00005 ABC transporter J4G45_12800 PF01066 CDP-alcohol phosphatidyltransferase J4G45_12810 PF01541 GIY-YIG catalytic domain J4G45_12810 PF02151 UvrB/uvrC motif J4G45_12810 PF08459 UvrC Helix-hairpin-helix N-terminal J4G45_12815 PF10431 C-terminal, D2-small domain, of ClpB protein J4G45_12815 PF07724 AAA domain (Cdc48 subfamily) J4G45_12830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4G45_12830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4G45_12830 PF00378 Enoyl-CoA hydratase/isomerase J4G45_12835 PF00108 Thiolase, N-terminal domain J4G45_12835 PF02803 Thiolase, C-terminal domain J4G45_12850 PF01323 DSBA-like thioredoxin domain J4G45_12880 PF00183 Hsp90 protein J4G45_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_12890 PF03922 OmpW family J4G45_12895 PF03553 Na+/H+ antiporter family J4G45_12895 PF13726 Na+-H+ antiporter family J4G45_12900 PF00561 alpha/beta hydrolase fold J4G45_12925 PF04998 RNA polymerase Rpb1, domain 5 J4G45_12925 PF05000 RNA polymerase Rpb1, domain 4 J4G45_12925 PF00623 RNA polymerase Rpb1, domain 2 J4G45_12925 PF04997 RNA polymerase Rpb1, domain 1 J4G45_12925 PF04983 RNA polymerase Rpb1, domain 3 J4G45_12930 PF04560 RNA polymerase Rpb2, domain 7 J4G45_12930 PF00562 RNA polymerase Rpb2, domain 6 J4G45_12930 PF10385 RNA polymerase beta subunit external 1 domain J4G45_12930 PF04565 RNA polymerase Rpb2, domain 3 J4G45_12930 PF04561 RNA polymerase Rpb2, domain 2 J4G45_12930 PF04563 RNA polymerase beta subunit J4G45_12935 PF00542 Ribosomal protein L7/L12 C-terminal domain J4G45_12935 PF16320 Ribosomal protein L7/L12 dimerisation domain J4G45_12940 PF00466 Ribosomal protein L10 J4G45_12945 PF00687 Ribosomal protein L1p/L10e family J4G45_12950 PF03946 Ribosomal protein L11, N-terminal domain J4G45_12950 PF00298 Ribosomal protein L11, RNA binding domain J4G45_12955 PF02357 Transcription termination factor nusG J4G45_12955 PF00467 KOW motif J4G45_12960 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4G45_12970 PF03144 Elongation factor Tu domain 2 J4G45_12970 PF03143 Elongation factor Tu C-terminal domain J4G45_12970 PF00009 Elongation factor Tu GTP binding domain J4G45_12995 PF00425 chorismate binding enzyme J4G45_12995 PF04715 Anthranilate synthase component I, N terminal region J4G45_13000 PF13419 Haloacid dehalogenase-like hydrolase J4G45_13005 PF16697 Inner membrane component of T3SS, cytoplasmic domain J4G45_13010 PF00263 Bacterial type II and III secretion system protein J4G45_13010 PF03958 Bacterial type II/III secretion system short domain J4G45_13025 PF00816 H-NS histone family J4G45_13030 PF03061 Thioesterase superfamily J4G45_13050 PF03900 Porphobilinogen deaminase, C-terminal domain J4G45_13050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4G45_13055 PF00072 Response regulator receiver domain J4G45_13055 PF04397 LytTr DNA-binding domain J4G45_13060 PF06580 Histidine kinase J4G45_13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_13060 PF07694 5TMR of 5TMR-LYT J4G45_13065 PF14698 Argininosuccinate lyase C-terminal J4G45_13065 PF00206 Lyase J4G45_13070 PF04362 Bacterial Fe(2+) trafficking J4G45_13075 PF01895 PhoU domain J4G45_13080 PF02321 Outer membrane efflux protein J4G45_13090 PF13667 ThiC-associated domain J4G45_13090 PF01964 Radical SAM ThiC family J4G45_13095 PF00293 NUDIX domain J4G45_13100 PF00149 Calcineurin-like phosphoesterase J4G45_13105 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4G45_13110 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G45_13120 PF01098 Cell cycle protein J4G45_13125 PF02875 Mur ligase family, glutamate ligase domain J4G45_13125 PF08245 Mur ligase middle domain J4G45_13135 PF07670 Nucleoside recognition J4G45_13135 PF02421 Ferrous iron transport protein B J4G45_13135 PF07664 Ferrous iron transport protein B C terminus J4G45_13145 PF00589 Phage integrase family J4G45_13145 PF02899 Phage integrase, N-terminal SAM-like domain J4G45_13150 PF13098 Thioredoxin-like domain J4G45_13150 PF10411 Disulfide bond isomerase protein N-terminus J4G45_13155 PF00742 Homoserine dehydrogenase J4G45_13155 PF01842 ACT domain J4G45_13155 PF03447 Homoserine dehydrogenase, NAD binding domain J4G45_13160 PF00291 Pyridoxal-phosphate dependent enzyme J4G45_13165 PF00768 D-alanyl-D-alanine carboxypeptidase J4G45_13170 PF00072 Response regulator receiver domain J4G45_13170 PF00196 Bacterial regulatory proteins, luxR family J4G45_13175 PF00512 His Kinase A (phospho-acceptor) domain J4G45_13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G45_13180 PF00158 Sigma-54 interaction domain J4G45_13180 PF00072 Response regulator receiver domain J4G45_13180 PF02954 Bacterial regulatory protein, Fis family J4G45_13185 PF03572 Peptidase family S41 J4G45_13185 PF01471 Putative peptidoglycan binding domain J4G45_13185 PF17820 PDZ domain J4G45_13190 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4G45_13190 PF01676 Metalloenzyme superfamily J4G45_13195 PF03739 Lipopolysaccharide export system permease LptF/LptG J4G45_13200 PF03739 Lipopolysaccharide export system permease LptF/LptG J4G45_13205 PF02789 Cytosol aminopeptidase family, N-terminal domain J4G45_13205 PF00883 Cytosol aminopeptidase family, catalytic domain J4G45_13225 PF09335 SNARE associated Golgi protein J4G45_13230 PF00677 Lumazine binding domain J4G45_13240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4G45_13240 PF01872 RibD C-terminal domain J4G45_13245 PF03477 ATP cone domain J4G45_13250 PF00909 Ammonium Transporter Family J4G45_13255 PF00543 Nitrogen regulatory protein P-II J4G45_13265 PF01078 Magnesium chelatase, subunit ChlI J4G45_13265 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4G45_13285 PF00719 Inorganic pyrophosphatase J4G45_13300 PF00501 AMP-binding enzyme J4G45_13300 PF13193 AMP-binding enzyme C-terminal domain J4G45_13305 PF00521 DNA gyrase/topoisomerase IV, subunit A J4G45_13305 PF03989 DNA gyrase C-terminal domain, beta-propeller J4G45_13310 PF07690 Major Facilitator Superfamily J4G45_13315 PF03458 UPF0126 domain J4G45_13320 PF02810 SEC-C motif J4G45_13325 PF03741 Integral membrane protein TerC family J4G45_13325 PF03471 Transporter associated domain J4G45_13325 PF00571 CBS domain J4G45_13335 PF03641 Possible lysine decarboxylase J4G45_13345 PF07690 Major Facilitator Superfamily J4G45_13350 PF01183 Glycosyl hydrolases family 25 J4G45_13360 PF11798 IMS family HHH motif J4G45_13360 PF11799 impB/mucB/samB family C-terminal domain J4G45_13360 PF00817 impB/mucB/samB family J4G45_13365 PF01042 Endoribonuclease L-PSP J4G45_13375 PF08497 Radical SAM N-terminal J4G45_13375 PF11842 Domain of unknown function (DUF3362) J4G45_13375 PF04055 Radical SAM superfamily J4G45_13380 PF07690 Major Facilitator Superfamily J4G45_13385 PF07690 Major Facilitator Superfamily J4G45_13425 PF01327 Polypeptide deformylase J4G45_13435 PF17782 DprA winged helix domain J4G45_13435 PF02481 DNA recombination-mediator protein A J4G45_13440 PF01300 Telomere recombination J4G45_13455 PF00892 EamA-like transporter family J4G45_13460 PF00255 Glutathione peroxidase J4G45_13470 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4G45_13475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G45_13475 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4G45_13480 PF00231 ATP synthase J4G45_13485 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4G45_13485 PF00306 ATP synthase alpha/beta chain, C terminal domain J4G45_13485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G45_13490 PF00213 ATP synthase delta (OSCP) subunit J4G45_13495 PF00430 ATP synthase B/B' CF(0) J4G45_13500 PF00137 ATP synthase subunit C J4G45_13505 PF00119 ATP synthase A chain J4G45_13525 PF00005 ABC transporter J4G45_13530 PF00950 ABC 3 transport family J4G45_13540 PF01810 LysE type translocator J4G45_13545 PF04261 Dyp-type peroxidase family J4G45_13570 PF13936 Helix-turn-helix domain J4G45_13570 PF00665 Integrase core domain J4G45_13580 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J4G45_13580 PF04717 Type VI secretion system, phage-baseplate injector J4G45_13580 PF13296 Putative type VI secretion system Rhs element Vgr J4G45_13605 PF01593 Flavin containing amine oxidoreductase J4G45_13610 PF02678 Pirin J4G45_13610 PF05726 Pirin C-terminal cupin domain J4G45_13615 PF00578 AhpC/TSA family J4G45_13615 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G45_13620 PF00436 Single-strand binding protein family J4G45_13625 PF07690 Major Facilitator Superfamily J4G45_13635 PF02581 Thiamine monophosphate synthase J4G45_13635 PF03070 TENA/THI-4/PQQC family J4G45_13635 PF08543 Phosphomethylpyrimidine kinase J4G45_13640 PF17760 UvrA interaction domain J4G45_13640 PF17755 UvrA DNA-binding domain J4G45_13645 PF00072 Response regulator receiver domain J4G45_13645 PF00990 Diguanylate cyclase, GGDEF domain J4G45_13665 PF00474 Sodium:solute symporter family J4G45_13670 PF04341 Protein of unknown function, DUF485