locus-tag class description J4G46_00010 PF01300 Telomere recombination J4G46_00025 PF00892 EamA-like transporter family J4G46_00030 PF00255 Glutathione peroxidase J4G46_00040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4G46_00045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G46_00045 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4G46_00050 PF00231 ATP synthase J4G46_00055 PF00306 ATP synthase alpha/beta chain, C terminal domain J4G46_00055 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4G46_00055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G46_00060 PF00213 ATP synthase delta (OSCP) subunit J4G46_00065 PF00430 ATP synthase B/B' CF(0) J4G46_00070 PF00137 ATP synthase subunit C J4G46_00075 PF00119 ATP synthase A chain J4G46_00095 PF00005 ABC transporter J4G46_00100 PF00950 ABC 3 transport family J4G46_00110 PF01810 LysE type translocator J4G46_00115 PF04261 Dyp-type peroxidase family J4G46_00125 PF00182 Chitinase class I J4G46_00130 PF13296 Putative type VI secretion system Rhs element Vgr J4G46_00130 PF04717 Type VI secretion system, phage-baseplate injector J4G46_00130 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J4G46_00155 PF01593 Flavin containing amine oxidoreductase J4G46_00160 PF02678 Pirin J4G46_00160 PF05726 Pirin C-terminal cupin domain J4G46_00165 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G46_00165 PF00578 AhpC/TSA family J4G46_00170 PF00436 Single-strand binding protein family J4G46_00175 PF07690 Major Facilitator Superfamily J4G46_00185 PF03070 TENA/THI-4/PQQC family J4G46_00190 PF17760 UvrA interaction domain J4G46_00190 PF17755 UvrA DNA-binding domain J4G46_00195 PF00072 Response regulator receiver domain J4G46_00195 PF00990 Diguanylate cyclase, GGDEF domain J4G46_00210 PF00474 Sodium:solute symporter family J4G46_00215 PF04341 Protein of unknown function, DUF485 J4G46_00220 PF00072 Response regulator receiver domain J4G46_00220 PF09456 RcsC Alpha-Beta-Loop (ABL) J4G46_00220 PF00512 His Kinase A (phospho-acceptor) domain J4G46_00220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_00230 PF00390 Malic enzyme, N-terminal domain J4G46_00230 PF03949 Malic enzyme, NAD binding domain J4G46_00240 PF05746 DALR anticodon binding domain J4G46_00240 PF00750 tRNA synthetases class I (R) J4G46_00240 PF03485 Arginyl tRNA synthetase N terminal domain J4G46_00260 PF02678 Pirin J4G46_00260 PF05726 Pirin C-terminal cupin domain J4G46_00265 PF00072 Response regulator receiver domain J4G46_00265 PF00990 Diguanylate cyclase, GGDEF domain J4G46_00270 PF02540 NAD synthase J4G46_00270 PF00958 GMP synthase C terminal domain J4G46_00270 PF00117 Glutamine amidotransferase class-I J4G46_00275 PF07681 DoxX J4G46_00280 PF09335 SNARE associated Golgi protein J4G46_00295 PF13614 AAA domain J4G46_00300 PF04247 Invasion gene expression up-regulator, SirB J4G46_00305 PF01722 BolA-like protein J4G46_00320 PF07804 HipA-like C-terminal domain J4G46_00320 PF13657 HipA N-terminal domain J4G46_00325 PF00271 Helicase conserved C-terminal domain J4G46_00325 PF00176 SNF2 family N-terminal domain J4G46_00325 PF12419 SNF2 Helicase protein J4G46_00335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G46_00335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G46_00335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G46_00335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G46_00340 PF16363 GDP-mannose 4,6 dehydratase J4G46_00345 PF00342 Phosphoglucose isomerase J4G46_00350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G46_00350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G46_00350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G46_00355 PF00483 Nucleotidyl transferase J4G46_00360 PF02397 Bacterial sugar transferase J4G46_00365 PF00535 Glycosyl transferase family 2 J4G46_00390 PF02423 Ornithine cyclodeaminase/mu-crystallin family J4G46_00395 PF00155 Aminotransferase class I and II J4G46_00400 PF01943 Polysaccharide biosynthesis protein J4G46_00405 PF02719 Polysaccharide biosynthesis protein J4G46_00410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4G46_00415 PF14602 Hexapeptide repeat of succinyl-transferase J4G46_00415 PF17836 PglD N-terminal domain J4G46_00415 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_00420 PF02397 Bacterial sugar transferase J4G46_00425 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_00425 PF06426 Serine acetyltransferase, N-terminal J4G46_00430 PF00534 Glycosyl transferases group 1 J4G46_00430 PF13477 Glycosyl transferase 4-like J4G46_00435 PF00534 Glycosyl transferases group 1 J4G46_00435 PF13439 Glycosyltransferase Family 4 J4G46_00440 PF00534 Glycosyl transferases group 1 J4G46_00440 PF13439 Glycosyltransferase Family 4 J4G46_00445 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_00460 PF01370 NAD dependent epimerase/dehydratase family J4G46_00465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4G46_00465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4G46_00465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4G46_00470 PF02563 Polysaccharide biosynthesis/export protein J4G46_00470 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J4G46_00470 PF10531 SLBB domain J4G46_00475 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4G46_00480 PF02706 Chain length determinant protein J4G46_00480 PF13807 G-rich domain on putative tyrosine kinase J4G46_00480 PF13614 AAA domain J4G46_00485 PF04480 Protein of unknown function (DUF559) J4G46_00490 PF14052 Capsule assembly protein Wzi J4G46_00500 PF01113 Dihydrodipicolinate reductase, N-terminus J4G46_00500 PF05173 Dihydrodipicolinate reductase, C-terminus J4G46_00510 PF00684 DnaJ central domain J4G46_00510 PF01556 DnaJ C terminal domain J4G46_00510 PF00226 DnaJ domain J4G46_00520 PF00873 AcrB/AcrD/AcrF family J4G46_00525 PF00529 HlyD membrane-fusion protein of T1SS J4G46_00525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G46_00530 PF00440 Bacterial regulatory proteins, tetR family J4G46_00535 PF00311 Phosphoenolpyruvate carboxylase J4G46_00540 PF00990 Diguanylate cyclase, GGDEF domain J4G46_00540 PF00072 Response regulator receiver domain J4G46_00545 PF00860 Permease family J4G46_00565 PF00920 Dehydratase family J4G46_00570 PF00920 Dehydratase family J4G46_00575 PF02911 Formyl transferase, C-terminal domain J4G46_00575 PF00551 Formyl transferase J4G46_00580 PF01189 16S rRNA methyltransferase RsmB/F J4G46_00580 PF01029 NusB family J4G46_00590 PF00209 Sodium:neurotransmitter symporter family J4G46_00595 PF00171 Aldehyde dehydrogenase family J4G46_00630 PF00579 tRNA synthetases class I (W and Y) J4G46_00635 PF03702 Anhydro-N-acetylmuramic acid kinase J4G46_00640 PF01521 Iron-sulphur cluster biosynthesis J4G46_00660 PF00005 ABC transporter J4G46_00660 PF12848 ABC transporter J4G46_00670 PF00204 DNA gyrase B J4G46_00670 PF00986 DNA gyrase B subunit, carboxyl terminus J4G46_00670 PF18053 DNA gyrase B subunit insert domain J4G46_00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_00670 PF01751 Toprim domain J4G46_00675 PF02463 RecF/RecN/SMC N terminal domain J4G46_00680 PF00712 DNA polymerase III beta subunit, N-terminal domain J4G46_00680 PF02768 DNA polymerase III beta subunit, C-terminal domain J4G46_00680 PF02767 DNA polymerase III beta subunit, central domain J4G46_00685 PF11638 DnaA N-terminal domain J4G46_00685 PF08299 Bacterial dnaA protein helix-turn-helix J4G46_00685 PF00308 Bacterial dnaA protein J4G46_00690 PF00468 Ribosomal protein L34 J4G46_00695 PF00825 Ribonuclease P J4G46_00700 PF01809 Putative membrane protein insertion efficiency factor J4G46_00705 PF14849 YidC periplasmic domain J4G46_00705 PF02096 60Kd inner membrane protein J4G46_00710 PF01926 50S ribosome-binding GTPase J4G46_00710 PF10396 GTP-binding protein TrmE N-terminus J4G46_00710 PF12631 MnmE helical domain J4G46_00715 PF00589 Phage integrase family J4G46_00715 PF14659 Phage integrase, N-terminal SAM-like domain J4G46_00755 PF00436 Single-strand binding protein family J4G46_00790 PF13005 zinc-finger binding domain of transposase IS66 J4G46_00790 PF13817 IS66 C-terminal element J4G46_00790 PF03050 Transposase IS66 family J4G46_00790 PF13007 Transposase C of IS166 homeodomain J4G46_00805 PF02583 Metal-sensitive transcriptional repressor J4G46_00810 PF01545 Cation efflux family J4G46_00815 PF10411 Disulfide bond isomerase protein N-terminus J4G46_00815 PF13098 Thioredoxin-like domain J4G46_00825 PF00156 Phosphoribosyl transferase domain J4G46_00830 PF01979 Amidohydrolase family J4G46_00835 PF03741 Integral membrane protein TerC family J4G46_00845 PF08240 Alcohol dehydrogenase GroES-like domain J4G46_00845 PF00107 Zinc-binding dehydrogenase J4G46_00850 PF01225 Mur ligase family, catalytic domain J4G46_00850 PF02875 Mur ligase family, glutamate ligase domain J4G46_00850 PF08245 Mur ligase middle domain J4G46_00860 PF00731 AIR carboxylase J4G46_00865 PF02222 ATP-grasp domain J4G46_00865 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4G46_00875 PF13406 Transglycosylase SLT domain J4G46_00890 PF00012 Hsp70 protein J4G46_00895 PF01025 GrpE J4G46_00905 PF07859 alpha/beta hydrolase fold J4G46_00915 PF07282 Putative transposase DNA-binding domain J4G46_00915 PF01385 Probable transposase J4G46_00915 PF12323 Helix-turn-helix domain J4G46_00925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4G46_00955 PF07690 Major Facilitator Superfamily J4G46_00965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G46_00970 PF01252 Signal peptidase (SPase) II J4G46_00975 PF08264 Anticodon-binding domain of tRNA J4G46_00975 PF06827 Zinc finger found in FPG and IleRS J4G46_00975 PF00133 tRNA synthetases class I (I, L, M and V) J4G46_00980 PF06574 FAD synthetase J4G46_00980 PF01687 Riboflavin kinase J4G46_00990 PF08362 YcdC-like protein, C-terminal region J4G46_00990 PF00440 Bacterial regulatory proteins, tetR family J4G46_00995 PF00696 Amino acid kinase family J4G46_00995 PF00583 Acetyltransferase (GNAT) family J4G46_01020 PF00106 short chain dehydrogenase J4G46_01025 PF13419 Haloacid dehalogenase-like hydrolase J4G46_01035 PF01323 DSBA-like thioredoxin domain J4G46_01040 PF00440 Bacterial regulatory proteins, tetR family J4G46_01045 PF01138 3' exoribonuclease family, domain 1 J4G46_01045 PF03725 3' exoribonuclease family, domain 2 J4G46_01055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4G46_01055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4G46_01060 PF01510 N-acetylmuramoyl-L-alanine amidase J4G46_01065 PF03023 Lipid II flippase MurJ J4G46_01070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G46_01070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4G46_01075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4G46_01075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G46_01080 PF00107 Zinc-binding dehydrogenase J4G46_01080 PF08240 Alcohol dehydrogenase GroES-like domain J4G46_01085 PF03352 Methyladenine glycosylase J4G46_01100 PF14815 NUDIX domain J4G46_01100 PF00730 HhH-GPD superfamily base excision DNA repair protein J4G46_01100 PF00633 Helix-hairpin-helix motif J4G46_01100 PF10576 Iron-sulfur binding domain of endonuclease III J4G46_01115 PF07043 Protein of unknown function (DUF1328) J4G46_01120 PF03692 Putative zinc- or iron-chelating domain J4G46_01125 PF16193 AAA C-terminal domain J4G46_01125 PF00004 ATPase family associated with various cellular activities (AAA) J4G46_01125 PF12002 MgsA AAA+ ATPase C terminal J4G46_01130 PF00313 'Cold-shock' DNA-binding domain J4G46_01135 PF01259 SAICAR synthetase J4G46_01145 PF00701 Dihydrodipicolinate synthetase family J4G46_01150 PF07690 Major Facilitator Superfamily J4G46_01160 PF00857 Isochorismatase family J4G46_01165 PF17941 Polyphosphate kinase C-terminal domain 1 J4G46_01165 PF13089 Polyphosphate kinase N-terminal domain J4G46_01165 PF02503 Polyphosphate kinase middle domain J4G46_01165 PF13090 Polyphosphate kinase C-terminal domain 2 J4G46_01190 PF02580 D-Tyr-tRNA(Tyr) deacylase J4G46_01195 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4G46_01195 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4G46_01200 PF00581 Rhodanese-like domain J4G46_01205 PF02666 Phosphatidylserine decarboxylase J4G46_01210 PF00989 PAS fold J4G46_01210 PF11808 Phosphate regulon sensor protein PhoR J4G46_01210 PF00512 His Kinase A (phospho-acceptor) domain J4G46_01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_01215 PF00486 Transcriptional regulatory protein, C terminal J4G46_01215 PF00072 Response regulator receiver domain J4G46_01225 PF00106 short chain dehydrogenase J4G46_01230 PF01554 MatE J4G46_01235 PF00155 Aminotransferase class I and II J4G46_01240 PF04286 Protein of unknown function (DUF445) J4G46_01255 PF04262 Glutamate-cysteine ligase J4G46_01260 PF02600 Disulfide bond formation protein DsbB J4G46_01270 PF05728 Uncharacterised protein family (UPF0227) J4G46_01275 PF00204 DNA gyrase B J4G46_01275 PF00986 DNA gyrase B subunit, carboxyl terminus J4G46_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_01275 PF01751 Toprim domain J4G46_01285 PF00939 Sodium:sulfate symporter transmembrane region J4G46_01315 PF11412 Disulphide bond corrector protein DsbC J4G46_01315 PF02683 Cytochrome C biogenesis protein transmembrane region J4G46_01320 PF00043 Glutathione S-transferase, C-terminal domain J4G46_01320 PF13417 Glutathione S-transferase, N-terminal domain J4G46_01325 PF02525 Flavodoxin-like fold J4G46_01330 PF07859 alpha/beta hydrolase fold J4G46_01340 PF03960 ArsC family J4G46_01345 PF03372 Endonuclease/Exonuclease/phosphatase family J4G46_01350 PF00156 Phosphoribosyl transferase domain J4G46_01380 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4G46_01380 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4G46_01385 PF04101 Glycosyltransferase family 28 C-terminal domain J4G46_01385 PF03033 Glycosyltransferase family 28 N-terminal domain J4G46_01390 PF01225 Mur ligase family, catalytic domain J4G46_01390 PF02875 Mur ligase family, glutamate ligase domain J4G46_01390 PF08245 Mur ligase middle domain J4G46_01395 PF07478 D-ala D-ala ligase C-terminus J4G46_01395 PF01820 D-ala D-ala ligase N-terminus J4G46_01400 PF03799 Cell division protein FtsQ J4G46_01400 PF08478 POTRA domain, FtsQ-type J4G46_01405 PF02491 SHS2 domain inserted in FTSA J4G46_01410 PF00091 Tubulin/FtsZ family, GTPase domain J4G46_01410 PF12327 FtsZ family, C-terminal domain J4G46_01415 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4G46_01430 PF17831 Pyruvate dehydrogenase E1 component middle domain J4G46_01430 PF00456 Transketolase, thiamine diphosphate binding domain J4G46_01435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4G46_01435 PF00364 Biotin-requiring enzyme J4G46_01435 PF02817 e3 binding domain J4G46_01440 PF01169 Uncharacterized protein family UPF0016 J4G46_01445 PF01613 Flavin reductase like domain J4G46_01445 PF00258 Flavodoxin J4G46_01450 PF03692 Putative zinc- or iron-chelating domain J4G46_01455 PF00478 IMP dehydrogenase / GMP reductase domain J4G46_01455 PF00571 CBS domain J4G46_01460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G46_01460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G46_01460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G46_01460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G46_01465 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4G46_01465 PF01243 Pyridoxamine 5'-phosphate oxidase J4G46_01470 PF01368 DHH family J4G46_01470 PF02272 DHHA1 domain J4G46_01470 PF17768 RecJ OB domain J4G46_01495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G46_01500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4G46_01510 PF05552 Conserved TM helix J4G46_01510 PF00924 Mechanosensitive ion channel J4G46_01515 PF16177 Acetyl-coenzyme A synthetase N-terminus J4G46_01515 PF00501 AMP-binding enzyme J4G46_01515 PF13193 AMP-binding enzyme C-terminal domain J4G46_01555 PF01380 SIS domain J4G46_01560 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_01560 PF14602 Hexapeptide repeat of succinyl-transferase J4G46_01560 PF12804 MobA-like NTP transferase domain J4G46_01565 PF04608 Phosphatidylglycerophosphatase A J4G46_01570 PF00586 AIR synthase related protein, N-terminal domain J4G46_01570 PF02769 AIR synthase related protein, C-terminal domain J4G46_01575 PF01029 NusB family J4G46_01580 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4G46_01585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4G46_01585 PF00925 GTP cyclohydrolase II J4G46_01595 PF00196 Bacterial regulatory proteins, luxR family J4G46_01595 PF00072 Response regulator receiver domain J4G46_01600 PF04851 Type III restriction enzyme, res subunit J4G46_01605 PF01555 DNA methylase J4G46_01690 PF13356 Arm DNA-binding domain J4G46_01690 PF00589 Phage integrase family J4G46_01700 PF02705 K+ potassium transporter J4G46_01725 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G46_01725 PF12833 Helix-turn-helix domain J4G46_01750 PF00977 Histidine biosynthesis protein J4G46_01755 PF01636 Phosphotransferase enzyme family J4G46_01770 PF00892 EamA-like transporter family J4G46_01775 PF00977 Histidine biosynthesis protein J4G46_01780 PF01612 3'-5' exonuclease J4G46_01780 PF00570 HRDC domain J4G46_01790 PF00117 Glutamine amidotransferase class-I J4G46_01795 PF00475 Imidazoleglycerol-phosphate dehydratase J4G46_01830 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J4G46_01830 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J4G46_01835 PF00672 HAMP domain J4G46_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_01835 PF00512 His Kinase A (phospho-acceptor) domain J4G46_01840 PF00072 Response regulator receiver domain J4G46_01840 PF00486 Transcriptional regulatory protein, C terminal J4G46_01845 PF17674 HHH domain J4G46_01845 PF00575 S1 RNA binding domain J4G46_01845 PF09371 Tex-like protein N-terminal domain J4G46_01845 PF16921 Tex protein YqgF-like domain J4G46_01860 PF00106 short chain dehydrogenase J4G46_01865 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G46_01870 PF00005 ABC transporter J4G46_01870 PF12848 ABC transporter J4G46_01890 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G46_01905 PF01795 MraW methylase family J4G46_01915 PF03717 Penicillin-binding Protein dimerisation domain J4G46_01915 PF00905 Penicillin binding protein transpeptidase domain J4G46_01920 PF01225 Mur ligase family, catalytic domain J4G46_01920 PF02875 Mur ligase family, glutamate ligase domain J4G46_01920 PF08245 Mur ligase middle domain J4G46_01925 PF08245 Mur ligase middle domain J4G46_01925 PF01225 Mur ligase family, catalytic domain J4G46_01925 PF02875 Mur ligase family, glutamate ligase domain J4G46_01930 PF00953 Glycosyl transferase family 4 J4G46_01935 PF13847 Methyltransferase domain J4G46_01940 PF17092 Penicillin-binding protein OB-like domain J4G46_01940 PF00912 Transglycosylase J4G46_01940 PF00905 Penicillin binding protein transpeptidase domain J4G46_01945 PF11104 Type IV pilus assembly protein PilM; J4G46_01950 PF05137 Fimbrial assembly protein (PilN) J4G46_01955 PF04350 Pilus assembly protein, PilO J4G46_01965 PF07660 Secretin and TonB N terminus short domain J4G46_01965 PF03958 Bacterial type II/III secretion system short domain J4G46_01965 PF11741 AMIN domain J4G46_01965 PF00263 Bacterial type II and III secretion system protein J4G46_01970 PF01202 Shikimate kinase J4G46_01975 PF01761 3-dehydroquinate synthase J4G46_01985 PF00310 Glutamine amidotransferases class-II J4G46_01985 PF04898 Glutamate synthase central domain J4G46_01985 PF01645 Conserved region in glutamate synthase J4G46_01985 PF01493 GXGXG motif J4G46_01990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4G46_01990 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_01995 PF04011 LemA family J4G46_02000 PF04536 TPM domain J4G46_02010 PF00114 Pilin (bacterial filament) J4G46_02010 PF07963 Prokaryotic N-terminal methylation motif J4G46_02015 PF04932 O-Antigen ligase J4G46_02015 PF15864 Protein glycosylation ligase J4G46_02015 PF11846 Virulence factor membrane-bound polymerase, C-terminal J4G46_02030 PF04932 O-Antigen ligase J4G46_02030 PF15864 Protein glycosylation ligase J4G46_02030 PF11846 Virulence factor membrane-bound polymerase, C-terminal J4G46_02035 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J4G46_02045 PF00210 Ferritin-like domain J4G46_02050 PF04324 BFD-like [2Fe-2S] binding domain J4G46_02055 PF01042 Endoribonuclease L-PSP J4G46_02060 PF13291 ACT domain J4G46_02060 PF04607 Region found in RelA / SpoT proteins J4G46_02060 PF02824 TGS domain J4G46_02065 PF01192 RNA polymerase Rpb6 J4G46_02070 PF00625 Guanylate kinase J4G46_02075 PF02401 LytB protein J4G46_02080 PF07963 Prokaryotic N-terminal methylation motif J4G46_02080 PF00114 Pilin (bacterial filament) J4G46_02115 PF00886 Ribosomal protein S16 J4G46_02120 PF05239 PRC-barrel domain J4G46_02120 PF01782 RimM N-terminal domain J4G46_02125 PF01746 tRNA (Guanine-1)-methyltransferase J4G46_02130 PF01245 Ribosomal protein L19 J4G46_02135 PF00561 alpha/beta hydrolase fold J4G46_02140 PF00561 alpha/beta hydrolase fold J4G46_02145 PF03280 Proteobacterial lipase chaperone protein J4G46_02150 PF09157 Pseudouridine synthase II TruB, C-terminal J4G46_02150 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4G46_02150 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4G46_02160 PF00892 EamA-like transporter family J4G46_02170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G46_02170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G46_02175 PF01565 FAD binding domain J4G46_02175 PF02913 FAD linked oxidases, C-terminal domain J4G46_02190 PF07690 Major Facilitator Superfamily J4G46_02195 PF12823 Domain of unknown function (DUF3817) J4G46_02200 PF00080 Copper/zinc superoxide dismutase (SODC) J4G46_02205 PF01594 AI-2E family transporter J4G46_02210 PF13614 AAA domain J4G46_02220 PF01209 ubiE/COQ5 methyltransferase family J4G46_02235 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4G46_02240 PF01197 Ribosomal protein L31 J4G46_02255 PF03109 ABC1 family J4G46_02260 PF01554 MatE J4G46_02270 PF04055 Radical SAM superfamily J4G46_02270 PF06969 HemN C-terminal domain J4G46_02280 PF00145 C-5 cytosine-specific DNA methylase J4G46_02305 PF05163 DinB family J4G46_02310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_02310 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_02310 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G46_02310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_02325 PF01488 Shikimate / quinate 5-dehydrogenase J4G46_02325 PF08501 Shikimate dehydrogenase substrate binding domain J4G46_02325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4G46_02335 PF01218 Coproporphyrinogen III oxidase J4G46_02340 PF06969 HemN C-terminal domain J4G46_02340 PF04055 Radical SAM superfamily J4G46_02345 PF00925 GTP cyclohydrolase II J4G46_02350 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4G46_02350 PF02779 Transketolase, pyrimidine binding domain J4G46_02350 PF02780 Transketolase, C-terminal domain J4G46_02355 PF00459 Inositol monophosphatase family J4G46_02360 PF00270 DEAD/DEAH box helicase J4G46_02360 PF00271 Helicase conserved C-terminal domain J4G46_02365 PF00005 ABC transporter J4G46_02370 PF02405 Permease MlaE J4G46_02375 PF02470 MlaD protein J4G46_02380 PF05494 MlaC protein J4G46_02390 PF01544 CorA-like Mg2+ transporter protein J4G46_02395 PF03641 Possible lysine decarboxylase J4G46_02405 PF00156 Phosphoribosyl transferase domain J4G46_02410 PF17191 RecG wedge domain J4G46_02410 PF00271 Helicase conserved C-terminal domain J4G46_02410 PF00270 DEAD/DEAH box helicase J4G46_02420 PF01553 Acyltransferase J4G46_02430 PF00375 Sodium:dicarboxylate symporter family J4G46_02440 PF01926 50S ribosome-binding GTPase J4G46_02445 PF02082 Transcriptional regulator J4G46_02450 PF00175 Oxidoreductase NAD-binding domain J4G46_02450 PF00042 Globin J4G46_02450 PF00970 Oxidoreductase FAD-binding domain J4G46_02455 PF05872 Bacterial protein of unknown function (DUF853) J4G46_02460 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G46_02465 PF00117 Glutamine amidotransferase class-I J4G46_02470 PF00338 Ribosomal protein S10p/S20e J4G46_02475 PF00297 Ribosomal protein L3 J4G46_02480 PF00573 Ribosomal protein L4/L1 family J4G46_02485 PF00276 Ribosomal protein L23 J4G46_02490 PF00181 Ribosomal Proteins L2, RNA binding domain J4G46_02490 PF03947 Ribosomal Proteins L2, C-terminal domain J4G46_02495 PF00203 Ribosomal protein S19 J4G46_02500 PF00237 Ribosomal protein L22p/L17e J4G46_02505 PF00189 Ribosomal protein S3, C-terminal domain J4G46_02505 PF07650 KH domain J4G46_02510 PF00252 Ribosomal protein L16p/L10e J4G46_02515 PF00831 Ribosomal L29 protein J4G46_02520 PF00366 Ribosomal protein S17 J4G46_02525 PF00238 Ribosomal protein L14p/L23e J4G46_02530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4G46_02530 PF00467 KOW motif J4G46_02535 PF00673 ribosomal L5P family C-terminus J4G46_02535 PF00281 Ribosomal protein L5 J4G46_02540 PF00253 Ribosomal protein S14p/S29e J4G46_02545 PF00410 Ribosomal protein S8 J4G46_02550 PF00347 Ribosomal protein L6 J4G46_02555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4G46_02560 PF03719 Ribosomal protein S5, C-terminal domain J4G46_02560 PF00333 Ribosomal protein S5, N-terminal domain J4G46_02565 PF00327 Ribosomal protein L30p/L7e J4G46_02570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4G46_02575 PF00344 SecY translocase J4G46_02580 PF00444 Ribosomal protein L36 J4G46_02585 PF00416 Ribosomal protein S13/S18 J4G46_02590 PF00411 Ribosomal protein S11 J4G46_02595 PF00163 Ribosomal protein S4/S9 N-terminal domain J4G46_02595 PF01479 S4 domain J4G46_02600 PF01000 RNA polymerase Rpb3/RpoA insert domain J4G46_02600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4G46_02600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4G46_02605 PF01196 Ribosomal protein L17 J4G46_02610 PF00743 Flavin-binding monooxygenase-like J4G46_02615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_02615 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_02615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_02620 PF03937 Flavinator of succinate dehydrogenase J4G46_02655 PF09526 Probable metal-binding protein (DUF2387) J4G46_02660 PF01432 Peptidase family M3 J4G46_02670 PF17876 Cold shock domain J4G46_02670 PF08461 Ribonuclease R winged-helix domain J4G46_02670 PF00773 RNB domain J4G46_02670 PF08206 Ribonuclease B OB domain J4G46_02670 PF00575 S1 RNA binding domain J4G46_02700 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4G46_02705 PF01625 Peptide methionine sulfoxide reductase J4G46_02720 PF00186 Dihydrofolate reductase J4G46_02725 PF00303 Thymidylate synthase J4G46_02735 PF01790 Prolipoprotein diacylglyceryl transferase J4G46_02750 PF00902 Sec-independent protein translocase protein (TatC) J4G46_02755 PF02416 mttA/Hcf106 family J4G46_02760 PF02416 mttA/Hcf106 family J4G46_02765 PF01725 Ham1 family J4G46_02780 PF00561 alpha/beta hydrolase fold J4G46_02780 PF07021 Methionine biosynthesis protein MetW J4G46_02785 PF00561 alpha/beta hydrolase fold J4G46_02790 PF00682 HMGL-like J4G46_02790 PF08502 LeuA allosteric (dimerisation) domain J4G46_02795 PF01070 FMN-dependent dehydrogenase J4G46_02800 PF13640 2OG-Fe(II) oxygenase superfamily J4G46_02800 PF18331 PKHD-type hydroxylase C-terminal domain J4G46_02805 PF00593 TonB dependent receptor J4G46_02805 PF07715 TonB-dependent Receptor Plug Domain J4G46_02810 PF07715 TonB-dependent Receptor Plug Domain J4G46_02810 PF00593 TonB dependent receptor J4G46_02815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G46_02815 PF05698 Bacterial trigger factor protein (TF) C-terminus J4G46_02815 PF05697 Bacterial trigger factor protein (TF) J4G46_02820 PF00574 Clp protease J4G46_02825 PF07724 AAA domain (Cdc48 subfamily) J4G46_02825 PF10431 C-terminal, D2-small domain, of ClpB protein J4G46_02825 PF06689 ClpX C4-type zinc finger J4G46_02835 PF05681 Fumarate hydratase (Fumerase) J4G46_02835 PF05683 Fumarase C-terminus J4G46_02855 PF07085 DRTGG domain J4G46_02855 PF01515 Phosphate acetyl/butaryl transferase J4G46_02860 PF00871 Acetokinase family J4G46_02870 PF00171 Aldehyde dehydrogenase family J4G46_02875 PF12697 Alpha/beta hydrolase family J4G46_02885 PF00933 Glycosyl hydrolase family 3 N terminal domain J4G46_02890 PF17804 Tail specific protease N-terminal domain J4G46_02890 PF00595 PDZ domain J4G46_02890 PF03572 Peptidase family S41 J4G46_02890 PF11818 C-terminal domain of tail specific protease (DUF3340) J4G46_02895 PF00563 EAL domain J4G46_02895 PF00990 Diguanylate cyclase, GGDEF domain J4G46_02895 PF03707 Bacterial signalling protein N terminal repeat J4G46_02905 PF00009 Elongation factor Tu GTP binding domain J4G46_02905 PF03144 Elongation factor Tu domain 2 J4G46_02905 PF16658 Class II release factor RF3, C-terminal domain J4G46_02920 PF01026 TatD related DNase J4G46_02925 PF00899 ThiF family J4G46_02930 PF01207 Dihydrouridine synthase (Dus) J4G46_02940 PF07690 Major Facilitator Superfamily J4G46_02950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4G46_02950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4G46_02955 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4G46_02960 PF02233 NAD(P) transhydrogenase beta subunit J4G46_02965 PF01385 Probable transposase J4G46_02965 PF12323 Helix-turn-helix domain J4G46_02965 PF07282 Putative transposase DNA-binding domain J4G46_02975 PF01261 Xylose isomerase-like TIM barrel J4G46_02980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4G46_02980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4G46_02985 PF00378 Enoyl-CoA hydratase/isomerase J4G46_02990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4G46_02990 PF01627 Hpt domain J4G46_02990 PF00072 Response regulator receiver domain J4G46_02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_02990 PF00672 HAMP domain J4G46_02990 PF00512 His Kinase A (phospho-acceptor) domain J4G46_02995 PF00291 Pyridoxal-phosphate dependent enzyme J4G46_03005 PF05958 tRNA (Uracil-5-)-methyltransferase J4G46_03010 PF02824 TGS domain J4G46_03010 PF13291 ACT domain J4G46_03010 PF04607 Region found in RelA / SpoT proteins J4G46_03025 PF07549 SecD/SecF GG Motif J4G46_03025 PF02355 Protein export membrane protein J4G46_03030 PF13721 SecD export protein N-terminal TM region J4G46_03030 PF02355 Protein export membrane protein J4G46_03030 PF07549 SecD/SecF GG Motif J4G46_03035 PF02699 Preprotein translocase subunit J4G46_03040 PF01702 Queuine tRNA-ribosyltransferase J4G46_03045 PF12323 Helix-turn-helix domain J4G46_03045 PF01385 Probable transposase J4G46_03045 PF07282 Putative transposase DNA-binding domain J4G46_03065 PF04011 LemA family J4G46_03075 PF02547 Queuosine biosynthesis protein J4G46_03090 PF03971 Monomeric isocitrate dehydrogenase J4G46_03095 PF00672 HAMP domain J4G46_03095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4G46_03095 PF00072 Response regulator receiver domain J4G46_03095 PF01627 Hpt domain J4G46_03095 PF00512 His Kinase A (phospho-acceptor) domain J4G46_03095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_03100 PF02321 Outer membrane efflux protein J4G46_03105 PF12704 MacB-like periplasmic core domain J4G46_03105 PF02687 FtsX-like permease family J4G46_03105 PF00005 ABC transporter J4G46_03110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G46_03115 PF01814 Hemerythrin HHE cation binding domain J4G46_03130 PF08264 Anticodon-binding domain of tRNA J4G46_03130 PF00133 tRNA synthetases class I (I, L, M and V) J4G46_03130 PF13603 Leucyl-tRNA synthetase, Domain 2 J4G46_03130 PF09334 tRNA synthetases class I (M) J4G46_03140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4G46_03140 PF00205 Thiamine pyrophosphate enzyme, central domain J4G46_03140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4G46_03145 PF10369 Small subunit of acetolactate synthase J4G46_03150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4G46_03150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4G46_03165 PF01522 Polysaccharide deacetylase J4G46_03170 PF08323 Starch synthase catalytic domain J4G46_03170 PF00534 Glycosyl transferases group 1 J4G46_03180 PF16363 GDP-mannose 4,6 dehydratase J4G46_03185 PF04321 RmlD substrate binding domain J4G46_03190 PF00483 Nucleotidyl transferase J4G46_03195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4G46_03200 PF00535 Glycosyl transferase family 2 J4G46_03230 PF02938 GAD domain J4G46_03230 PF00152 tRNA synthetases class II (D, K and N) J4G46_03230 PF01336 OB-fold nucleic acid binding domain J4G46_03240 PF07715 TonB-dependent Receptor Plug Domain J4G46_03240 PF00593 TonB dependent receptor J4G46_03245 PF13091 PLD-like domain J4G46_03260 PF06146 Phosphate-starvation-inducible E J4G46_03265 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G46_03265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_03265 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_03265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_03270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_03270 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_03270 PF12806 Acetyl-CoA dehydrogenase C-terminal like J4G46_03270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_03280 PF00512 His Kinase A (phospho-acceptor) domain J4G46_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_03280 PF00672 HAMP domain J4G46_03285 PF00486 Transcriptional regulatory protein, C terminal J4G46_03285 PF00072 Response regulator receiver domain J4G46_03300 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4G46_03315 PF01923 Cobalamin adenosyltransferase J4G46_03320 PF07715 TonB-dependent Receptor Plug Domain J4G46_03320 PF00593 TonB dependent receptor J4G46_03325 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4G46_03330 PF00291 Pyridoxal-phosphate dependent enzyme J4G46_03350 PF03710 Glutamate-ammonia ligase adenylyltransferase J4G46_03350 PF08335 GlnD PII-uridylyltransferase J4G46_03355 PF01063 Amino-transferase class IV J4G46_03380 PF00534 Glycosyl transferases group 1 J4G46_03380 PF13439 Glycosyltransferase Family 4 J4G46_03385 PF01569 PAP2 superfamily J4G46_03390 PF04384 Iron-sulphur cluster assembly J4G46_03395 PF00334 Nucleoside diphosphate kinase J4G46_03400 PF04055 Radical SAM superfamily J4G46_03410 PF13464 Domain of unknown function (DUF4115) J4G46_03415 PF04551 GcpE protein J4G46_03420 PF03129 Anticodon binding domain J4G46_03420 PF13393 Histidyl-tRNA synthetase J4G46_03430 PF01011 PQQ enzyme repeat J4G46_03430 PF13360 PQQ-like domain J4G46_03435 PF01926 50S ribosome-binding GTPase J4G46_03435 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4G46_03450 PF03819 MazG nucleotide pyrophosphohydrolase domain J4G46_03455 PF10531 SLBB domain J4G46_03460 PF01743 Poly A polymerase head domain J4G46_03460 PF12626 Polymerase A arginine-rich C-terminus J4G46_03460 PF12627 Probable RNA and SrmB- binding site of polymerase A J4G46_03465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4G46_03470 PF02548 Ketopantoate hydroxymethyltransferase J4G46_03475 PF02569 Pantoate-beta-alanine ligase J4G46_03480 PF03668 P-loop ATPase protein family J4G46_03485 PF00381 PTS HPr component phosphorylation site J4G46_03490 PF04751 Protein of unknown function (DUF615) J4G46_03495 PF00501 AMP-binding enzyme J4G46_03495 PF13193 AMP-binding enzyme C-terminal domain J4G46_03510 PF01565 FAD binding domain J4G46_03510 PF04030 D-arabinono-1,4-lactone oxidase J4G46_03520 PF03129 Anticodon binding domain J4G46_03520 PF02824 TGS domain J4G46_03520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G46_03520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4G46_03525 PF00707 Translation initiation factor IF-3, C-terminal domain J4G46_03525 PF05198 Translation initiation factor IF-3, N-terminal domain J4G46_03530 PF00043 Glutathione S-transferase, C-terminal domain J4G46_03530 PF02798 Glutathione S-transferase, N-terminal domain J4G46_03540 PF09335 SNARE associated Golgi protein J4G46_03550 PF01632 Ribosomal protein L35 J4G46_03555 PF00453 Ribosomal protein L20 J4G46_03565 PF01409 tRNA synthetases class II core domain (F) J4G46_03565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4G46_03570 PF03483 B3/4 domain J4G46_03570 PF01588 Putative tRNA binding domain J4G46_03570 PF03147 Ferredoxin-fold anticodon binding domain J4G46_03570 PF03484 tRNA synthetase B5 domain J4G46_03570 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4G46_03575 PF00216 Bacterial DNA-binding protein J4G46_03585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4G46_03585 PF07498 Rho termination factor, N-terminal domain J4G46_03585 PF07497 Rho termination factor, RNA-binding domain J4G46_03590 PF00085 Thioredoxin J4G46_03595 PF02541 Ppx/GppA phosphatase family J4G46_03600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4G46_03605 PF09179 TilS substrate binding domain J4G46_03605 PF11734 TilS substrate C-terminal domain J4G46_03605 PF01171 PP-loop family J4G46_03610 PF03807 NADP oxidoreductase coenzyme F420-dependent J4G46_03610 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4G46_03615 PF02325 YGGT family J4G46_03620 PF01367 5'-3' exonuclease, C-terminal SAM fold J4G46_03620 PF01612 3'-5' exonuclease J4G46_03620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4G46_03620 PF00476 DNA polymerase family A J4G46_03640 PF00437 Type II/IV secretion system protein J4G46_03650 PF02566 OsmC-like protein J4G46_03655 PF00795 Carbon-nitrogen hydrolase J4G46_03700 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4G46_03700 PF04963 Sigma-54 factor, core binding domain J4G46_03700 PF04552 Sigma-54, DNA binding domain J4G46_03705 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4G46_03710 PF01722 BolA-like protein J4G46_03715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4G46_03720 PF01634 ATP phosphoribosyltransferase J4G46_03725 PF00815 Histidinol dehydrogenase J4G46_03730 PF00155 Aminotransferase class I and II J4G46_03735 PF04715 Anthranilate synthase component I, N terminal region J4G46_03735 PF00425 chorismate binding enzyme J4G46_03775 PF00293 NUDIX domain J4G46_03780 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_03785 PF00814 Glycoprotease family J4G46_03790 PF02673 Bacitracin resistance protein BacA J4G46_03795 PF04445 Putative SAM-dependent methyltransferase J4G46_03805 PF00756 Putative esterase J4G46_03810 PF05987 Bacterial protein of unknown function (DUF898) J4G46_03825 PF00834 Ribulose-phosphate 3 epimerase family J4G46_03835 PF00394 Multicopper oxidase J4G46_03835 PF07732 Multicopper oxidase J4G46_03835 PF07731 Multicopper oxidase J4G46_03850 PF00893 Small Multidrug Resistance protein J4G46_03855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4G46_03855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4G46_03870 PF13007 Transposase C of IS166 homeodomain J4G46_03870 PF13005 zinc-finger binding domain of transposase IS66 J4G46_03870 PF13817 IS66 C-terminal element J4G46_03870 PF03050 Transposase IS66 family J4G46_03880 PF02581 Thiamine monophosphate synthase J4G46_03880 PF08543 Phosphomethylpyrimidine kinase J4G46_03885 PF13419 Haloacid dehalogenase-like hydrolase J4G46_03895 PF03653 Uncharacterised protein family (UPF0093) J4G46_03900 PF02801 Beta-ketoacyl synthase, C-terminal domain J4G46_03900 PF00109 Beta-ketoacyl synthase, N-terminal domain J4G46_03910 PF00164 Ribosomal protein S12/S23 J4G46_03915 PF00177 Ribosomal protein S7p/S5e J4G46_03920 PF14492 Elongation Factor G, domain II J4G46_03920 PF00009 Elongation factor Tu GTP binding domain J4G46_03920 PF03764 Elongation factor G, domain IV J4G46_03920 PF00679 Elongation factor G C-terminus J4G46_03920 PF03144 Elongation factor Tu domain 2 J4G46_03925 PF00009 Elongation factor Tu GTP binding domain J4G46_03925 PF03144 Elongation factor Tu domain 2 J4G46_03925 PF03143 Elongation factor Tu C-terminal domain J4G46_03935 PF00583 Acetyltransferase (GNAT) family J4G46_03940 PF04377 Arginine-tRNA-protein transferase, C terminus J4G46_03940 PF04376 Arginine-tRNA-protein transferase, N terminus J4G46_03945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4G46_03950 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_03955 PF01580 FtsK/SpoIIIE family J4G46_03955 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4G46_03955 PF09397 Ftsk gamma domain J4G46_03955 PF17854 FtsK alpha domain J4G46_03965 PF03776 Septum formation topological specificity factor MinE J4G46_03970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4G46_03975 PF03775 Septum formation inhibitor MinC, C-terminal domain J4G46_03985 PF01553 Acyltransferase J4G46_03990 PF00691 OmpA family J4G46_03990 PF13488 Glycine zipper J4G46_03995 PF13361 UvrD-like helicase C-terminal domain J4G46_03995 PF00580 UvrD/REP helicase N-terminal domain J4G46_04000 PF00692 dUTPase J4G46_04005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4G46_04005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4G46_04005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4G46_04005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4G46_04010 PF00696 Amino acid kinase family J4G46_04020 PF13230 Glutamine amidotransferases class-II J4G46_04025 PF01814 Hemerythrin HHE cation binding domain J4G46_04035 PF03658 RnfH family Ubiquitin J4G46_04040 PF04355 SmpA / OmlA family J4G46_04045 PF01475 Ferric uptake regulator family J4G46_04050 PF00437 Type II/IV secretion system protein J4G46_04055 PF00437 Type II/IV secretion system protein J4G46_04060 PF01168 Alanine racemase, N-terminal domain J4G46_04075 PF00149 Calcineurin-like phosphoesterase J4G46_04075 PF12320 Type 5 capsule protein repressor C-terminal domain J4G46_04085 PF01370 NAD dependent epimerase/dehydratase family J4G46_04085 PF08338 Domain of unknown function (DUF1731) J4G46_04090 PF01266 FAD dependent oxidoreductase J4G46_04095 PF00490 Delta-aminolevulinic acid dehydratase J4G46_04100 PF03061 Thioesterase superfamily J4G46_04110 PF00501 AMP-binding enzyme J4G46_04125 PF13185 GAF domain J4G46_04125 PF02954 Bacterial regulatory protein, Fis family J4G46_04125 PF00158 Sigma-54 interaction domain J4G46_04130 PF00753 Metallo-beta-lactamase superfamily J4G46_04135 PF01925 Sulfite exporter TauE/SafE J4G46_04145 PF06414 Zeta toxin J4G46_04155 PF00005 ABC transporter J4G46_04155 PF02687 FtsX-like permease family J4G46_04155 PF12704 MacB-like periplasmic core domain J4G46_04185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4G46_04185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4G46_04205 PF05992 SbmA/BacA-like family J4G46_04220 PF02934 GatB/GatE catalytic domain J4G46_04220 PF02637 GatB domain J4G46_04225 PF01425 Amidase J4G46_04230 PF02686 Glu-tRNAGln amidotransferase C subunit J4G46_04240 PF04085 rod shape-determining protein MreC J4G46_04245 PF04093 rod shape-determining protein MreD J4G46_04250 PF02545 Maf-like protein J4G46_04255 PF00575 S1 RNA binding domain J4G46_04255 PF10150 Ribonuclease E/G family J4G46_04265 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain J4G46_04265 PF06974 Protein of unknown function (DUF1298) J4G46_04270 PF01507 Phosphoadenosine phosphosulfate reductase family J4G46_04300 PF00005 ABC transporter J4G46_04300 PF17850 CysA C-terminal regulatory domain J4G46_04300 PF12857 TOBE-like domain J4G46_04305 PF00324 Amino acid permease J4G46_04310 PF04303 PrpF protein J4G46_04315 PF00348 Polyprenyl synthetase J4G46_04325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J4G46_04330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J4G46_04335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J4G46_04335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J4G46_04345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4G46_04345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J4G46_04345 PF10531 SLBB domain J4G46_04350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4G46_04350 PF00384 Molybdopterin oxidoreductase J4G46_04350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4G46_04355 PF00146 NADH dehydrogenase J4G46_04360 PF12838 4Fe-4S dicluster domain J4G46_04365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J4G46_04370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4G46_04375 PF00361 Proton-conducting membrane transporter J4G46_04375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4G46_04380 PF00361 Proton-conducting membrane transporter J4G46_04385 PF00361 Proton-conducting membrane transporter J4G46_04395 PF00313 'Cold-shock' DNA-binding domain J4G46_04400 PF00313 'Cold-shock' DNA-binding domain J4G46_04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_04405 PF03466 LysR substrate binding domain J4G46_04410 PF00175 Oxidoreductase NAD-binding domain J4G46_04410 PF00970 Oxidoreductase FAD-binding domain J4G46_04430 PF05552 Conserved TM helix J4G46_04450 PF00291 Pyridoxal-phosphate dependent enzyme J4G46_04465 PF06100 MCRA family J4G46_04480 PF09334 tRNA synthetases class I (M) J4G46_04480 PF01588 Putative tRNA binding domain J4G46_04485 PF10609 NUBPL iron-transfer P-loop NTPase J4G46_04495 PF00692 dUTPase J4G46_04520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G46_04520 PF03129 Anticodon binding domain J4G46_04520 PF04073 Aminoacyl-tRNA editing domain J4G46_04525 PF00873 AcrB/AcrD/AcrF family J4G46_04530 PF13533 Biotin-lipoyl like J4G46_04540 PF00072 Response regulator receiver domain J4G46_04545 PF00072 Response regulator receiver domain J4G46_04550 PF01584 CheW-like domain J4G46_04555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4G46_04555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4G46_04560 PF01627 Hpt domain J4G46_04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_04560 PF02895 Signal transducing histidine kinase, homodimeric domain J4G46_04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_04560 PF07194 P2 response regulator binding domain J4G46_04560 PF01627 Hpt domain J4G46_04560 PF01584 CheW-like domain J4G46_04560 PF01584 CheW-like domain J4G46_04560 PF02895 Signal transducing histidine kinase, homodimeric domain J4G46_04560 PF07194 P2 response regulator binding domain J4G46_04570 PF07687 Peptidase dimerisation domain J4G46_04570 PF01546 Peptidase family M20/M25/M40 J4G46_04575 PF08085 Entericidin EcnA/B family J4G46_04585 PF04304 Protein of unknown function (DUF454) J4G46_04645 PF00175 Oxidoreductase NAD-binding domain J4G46_04645 PF00258 Flavodoxin J4G46_04645 PF00667 FAD binding domain J4G46_04655 PF12805 FUSC-like inner membrane protein yccS J4G46_04660 PF07690 Major Facilitator Superfamily J4G46_04670 PF03616 Sodium/glutamate symporter J4G46_04675 PF02417 Chromate transporter J4G46_04680 PF01734 Patatin-like phospholipase J4G46_04690 PF03061 Thioesterase superfamily J4G46_04700 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4G46_04700 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4G46_04705 PF07152 YaeQ protein J4G46_04710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G46_04715 PF00990 Diguanylate cyclase, GGDEF domain J4G46_04720 PF00085 Thioredoxin J4G46_04725 PF08240 Alcohol dehydrogenase GroES-like domain J4G46_04725 PF00107 Zinc-binding dehydrogenase J4G46_04750 PF07282 Putative transposase DNA-binding domain J4G46_04750 PF01385 Probable transposase J4G46_04750 PF12323 Helix-turn-helix domain J4G46_04755 PF00571 CBS domain J4G46_04755 PF03471 Transporter associated domain J4G46_04755 PF01595 Cyclin M transmembrane N-terminal domain J4G46_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_04760 PF03466 LysR substrate binding domain J4G46_04765 PF00463 Isocitrate lyase family J4G46_04775 PF01553 Acyltransferase J4G46_04780 PF00444 Ribosomal protein L36 J4G46_04790 PF00905 Penicillin binding protein transpeptidase domain J4G46_04790 PF03717 Penicillin-binding Protein dimerisation domain J4G46_04805 PF05191 Adenylate kinase, active site lid J4G46_04815 PF10576 Iron-sulfur binding domain of endonuclease III J4G46_04815 PF00633 Helix-hairpin-helix motif J4G46_04815 PF00730 HhH-GPD superfamily base excision DNA repair protein J4G46_04820 PF04060 Putative Fe-S cluster J4G46_04825 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4G46_04825 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4G46_04835 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4G46_04840 PF02590 Predicted SPOUT methyltransferase J4G46_04845 PF04389 Peptidase family M28 J4G46_04850 PF00004 ATPase family associated with various cellular activities (AAA) J4G46_04850 PF05362 Lon protease (S16) C-terminal proteolytic domain J4G46_04850 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4G46_04855 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4G46_04870 PF02652 L-lactate permease J4G46_04875 PF07729 FCD domain J4G46_04875 PF00392 Bacterial regulatory proteins, gntR family J4G46_04880 PF01070 FMN-dependent dehydrogenase J4G46_04885 PF01565 FAD binding domain J4G46_04885 PF09330 D-lactate dehydrogenase, membrane binding J4G46_04890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_04890 PF03466 LysR substrate binding domain J4G46_04910 PF00990 Diguanylate cyclase, GGDEF domain J4G46_04910 PF00072 Response regulator receiver domain J4G46_04935 PF07282 Putative transposase DNA-binding domain J4G46_04935 PF12323 Helix-turn-helix domain J4G46_04935 PF01385 Probable transposase J4G46_04940 PF00145 C-5 cytosine-specific DNA methylase J4G46_04940 PF13411 MerR HTH family regulatory protein J4G46_04950 PF00072 Response regulator receiver domain J4G46_04950 PF00486 Transcriptional regulatory protein, C terminal J4G46_04955 PF00884 Sulfatase J4G46_04955 PF08019 Phosphoethanolamine transferase EptA/EptB J4G46_04965 PF09278 MerR, DNA binding J4G46_04965 PF00376 MerR family regulatory protein J4G46_04970 PF00403 Heavy-metal-associated domain J4G46_04985 PF01717 Cobalamin-independent synthase, Catalytic domain J4G46_04990 PF01613 Flavin reductase like domain J4G46_04995 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system J4G46_05020 PF03695 Uncharacterised protein family (UPF0149) J4G46_05025 PF00557 Metallopeptidase family M24 J4G46_05025 PF05195 Aminopeptidase P, N-terminal domain J4G46_05035 PF04221 RelB antitoxin J4G46_05040 PF01494 FAD binding domain J4G46_05045 PF01494 FAD binding domain J4G46_05055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4G46_05060 PF02021 Uncharacterised protein family UPF0102 J4G46_05065 PF04972 BON domain J4G46_05070 PF00135 Carboxylesterase family J4G46_05075 PF00293 NUDIX domain J4G46_05075 PF09297 NADH pyrophosphatase zinc ribbon domain J4G46_05085 PF00929 Exonuclease J4G46_05090 PF01464 Transglycosylase SLT domain J4G46_05090 PF01464 Transglycosylase SLT domain J4G46_05090 PF01476 LysM domain J4G46_05090 PF01476 LysM domain J4G46_05095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4G46_05100 PF00528 Binding-protein-dependent transport system inner membrane component J4G46_05105 PF00528 Binding-protein-dependent transport system inner membrane component J4G46_05105 PF12911 N-terminal TM domain of oligopeptide transport permease C J4G46_05110 PF00005 ABC transporter J4G46_05110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4G46_05115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G46_05115 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_05135 PF00324 Amino acid permease J4G46_05150 PF00929 Exonuclease J4G46_05155 PF01979 Amidohydrolase family J4G46_05160 PF00563 EAL domain J4G46_05160 PF00990 Diguanylate cyclase, GGDEF domain J4G46_05160 PF00360 Phytochrome region J4G46_05160 PF01590 GAF domain J4G46_05175 PF00764 Arginosuccinate synthase J4G46_05180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G46_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_05225 PF08479 POTRA domain, ShlB-type J4G46_05225 PF17287 POTRA domain J4G46_05225 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J4G46_05230 PF13018 Extended Signal Peptide of Type V secretion system J4G46_05230 PF13332 Hemagglutinin repeat J4G46_05230 PF05860 haemagglutination activity domain J4G46_05230 PF04829 Pre-toxin domain with VENN motif J4G46_05250 PF02796 Helix-turn-helix domain of resolvase J4G46_05250 PF00665 Integrase core domain J4G46_05255 PF01695 IstB-like ATP binding protein J4G46_05275 PF13953 PapC C-terminal domain J4G46_05275 PF13954 PapC N-terminal domain J4G46_05275 PF00577 Outer membrane usher protein J4G46_05280 PF02753 Pili assembly chaperone PapD, C-terminal domain J4G46_05280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J4G46_05295 PF13438 Domain of unknown function (DUF4113) J4G46_05295 PF00817 impB/mucB/samB family J4G46_05295 PF11799 impB/mucB/samB family C-terminal domain J4G46_05295 PF11798 IMS family HHH motif J4G46_05300 PF00717 Peptidase S24-like J4G46_05305 PF02601 Exonuclease VII, large subunit J4G46_05305 PF13742 OB-fold nucleic acid binding domain J4G46_05335 PF02384 N-6 DNA Methylase J4G46_05400 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4G46_05410 PF17871 AAA lid domain J4G46_05410 PF10431 C-terminal, D2-small domain, of ClpB protein J4G46_05410 PF07724 AAA domain (Cdc48 subfamily) J4G46_05410 PF00004 ATPase family associated with various cellular activities (AAA) J4G46_05420 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 J4G46_05425 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4G46_05440 PF05947 Type VI secretion system, TssF J4G46_05455 PF06761 Intracellular multiplication and human macrophage-killing J4G46_05455 PF14331 ImcF-related N-terminal domain J4G46_05455 PF06744 Type VI secretion protein IcmF C-terminal J4G46_05465 PF00691 OmpA family J4G46_05465 PF13488 Glycine zipper J4G46_05470 PF02769 AIR synthase related protein, C-terminal domain J4G46_05470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4G46_05470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4G46_05475 PF11890 Domain of unknown function (DUF3410) J4G46_05475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G46_05475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G46_05480 PF00152 tRNA synthetases class II (D, K and N) J4G46_05485 PF01743 Poly A polymerase head domain J4G46_05485 PF12627 Probable RNA and SrmB- binding site of polymerase A J4G46_05490 PF00390 Malic enzyme, N-terminal domain J4G46_05490 PF01515 Phosphate acetyl/butaryl transferase J4G46_05490 PF03949 Malic enzyme, NAD binding domain J4G46_05495 PF00563 EAL domain J4G46_05495 PF00990 Diguanylate cyclase, GGDEF domain J4G46_05495 PF03707 Bacterial signalling protein N terminal repeat J4G46_05500 PF04452 RNA methyltransferase J4G46_05505 PF02219 Methylenetetrahydrofolate reductase J4G46_05510 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J4G46_05510 PF05221 S-adenosyl-L-homocysteine hydrolase J4G46_05520 PF08238 Sel1 repeat J4G46_05535 PF04055 Radical SAM superfamily J4G46_05540 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_05540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G46_05560 PF00557 Metallopeptidase family M24 J4G46_05565 PF00318 Ribosomal protein S2 J4G46_05570 PF00889 Elongation factor TS J4G46_05585 PF05036 Sporulation related domain J4G46_05585 PF03330 Lytic transglycolase J4G46_05590 PF13406 Transglycosylase SLT domain J4G46_05600 PF14489 QueF-like protein J4G46_05600 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4G46_05605 PF01061 ABC-2 type transporter J4G46_05610 PF00005 ABC transporter J4G46_05635 PF00589 Phage integrase family J4G46_05635 PF13356 Arm DNA-binding domain J4G46_05730 PF13784 Fic/DOC family N-terminal J4G46_05730 PF02661 Fic/DOC family J4G46_05765 PF00464 Serine hydroxymethyltransferase J4G46_05770 PF03449 Transcription elongation factor, N-terminal J4G46_05770 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G46_05775 PF12323 Helix-turn-helix domain J4G46_05775 PF01385 Probable transposase J4G46_05775 PF07282 Putative transposase DNA-binding domain J4G46_05785 PF05816 Toxic anion resistance protein (TelA) J4G46_05795 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_05795 PF13192 Thioredoxin domain J4G46_05800 PF00037 4Fe-4S binding domain J4G46_05805 PF01136 Peptidase family U32 J4G46_05805 PF16325 Peptidase family U32 C-terminal domain J4G46_05810 PF03960 ArsC family J4G46_05815 PF01022 Bacterial regulatory protein, arsR family J4G46_05835 PF03358 NADPH-dependent FMN reductase J4G46_05840 PF13411 MerR HTH family regulatory protein J4G46_05860 PF00175 Oxidoreductase NAD-binding domain J4G46_05860 PF00970 Oxidoreductase FAD-binding domain J4G46_05865 PF18389 TrmO C-terminal domain J4G46_05865 PF01980 tRNA-methyltransferase O J4G46_05875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4G46_05875 PF00437 Type II/IV secretion system protein J4G46_05885 PF00072 Response regulator receiver domain J4G46_05885 PF00486 Transcriptional regulatory protein, C terminal J4G46_05890 PF00512 His Kinase A (phospho-acceptor) domain J4G46_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_05890 PF08521 Two-component sensor kinase N-terminal J4G46_05900 PF02581 Thiamine monophosphate synthase J4G46_05910 PF00912 Transglycosylase J4G46_05910 PF00905 Penicillin binding protein transpeptidase domain J4G46_05910 PF14814 Bifunctional transglycosylase second domain J4G46_05915 PF01513 ATP-NAD kinase J4G46_05920 PF07023 Protein of unknown function (DUF1315) J4G46_05925 PF00591 Glycosyl transferase family, a/b domain J4G46_05925 PF02885 Glycosyl transferase family, helical bundle domain J4G46_05930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_05930 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_05930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_05935 PF01817 Chorismate mutase type II J4G46_05935 PF00800 Prephenate dehydratase J4G46_05935 PF01842 ACT domain J4G46_05940 PF00155 Aminotransferase class I and II J4G46_05945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4G46_05965 PF03883 Peroxide stress protein YaaA J4G46_05970 PF03441 FAD binding domain of DNA photolyase J4G46_05970 PF00875 DNA photolyase J4G46_05975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4G46_05980 PF00768 D-alanyl-D-alanine carboxypeptidase J4G46_05980 PF07943 Penicillin-binding protein 5, C-terminal domain J4G46_05990 PF00849 RNA pseudouridylate synthase J4G46_05995 PF02567 Phenazine biosynthesis-like protein J4G46_06000 PF00675 Insulinase (Peptidase family M16) J4G46_06000 PF05193 Peptidase M16 inactive domain J4G46_06035 PF02581 Thiamine monophosphate synthase J4G46_06040 PF00202 Aminotransferase class-III J4G46_06045 PF00849 RNA pseudouridylate synthase J4G46_06050 PF18337 RapA N-terminal Tudor like domain J4G46_06050 PF18339 RapA N-terminal Tudor like domain 1 J4G46_06050 PF12137 RNA polymerase recycling family C-terminal J4G46_06050 PF00271 Helicase conserved C-terminal domain J4G46_06050 PF00176 SNF2 family N-terminal domain J4G46_06060 PF00440 Bacterial regulatory proteins, tetR family J4G46_06065 PF00970 Oxidoreductase FAD-binding domain J4G46_06065 PF00042 Globin J4G46_06065 PF00175 Oxidoreductase NAD-binding domain J4G46_06070 PF00487 Fatty acid desaturase J4G46_06080 PF07759 Protein of unknown function (DUF1615) J4G46_06085 PF01207 Dihydrouridine synthase (Dus) J4G46_06090 PF03060 Nitronate monooxygenase J4G46_06120 PF00578 AhpC/TSA family J4G46_06120 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G46_06125 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4G46_06125 PF04408 Helicase associated domain (HA2) J4G46_06125 PF00270 DEAD/DEAH box helicase J4G46_06125 PF00271 Helicase conserved C-terminal domain J4G46_06125 PF11898 Domain of unknown function (DUF3418) J4G46_06130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4G46_06130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4G46_06135 PF09190 DALR domain J4G46_06135 PF01406 tRNA synthetases class I (C) catalytic domain J4G46_06145 PF00571 CBS domain J4G46_06145 PF01380 SIS domain J4G46_06160 PF03968 OstA-like protein J4G46_06165 PF00005 ABC transporter J4G46_06165 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4G46_06170 PF01205 Uncharacterized protein family UPF0029 J4G46_06185 PF01596 O-methyltransferase J4G46_06195 PF00037 4Fe-4S binding domain J4G46_06195 PF11953 Domain of unknown function (DUF3470) J4G46_06200 PF05190 MutS family domain IV J4G46_06200 PF00488 MutS domain V J4G46_06200 PF01624 MutS domain I J4G46_06200 PF05192 MutS domain III J4G46_06200 PF05188 MutS domain II J4G46_06220 PF00581 Rhodanese-like domain J4G46_06235 PF00465 Iron-containing alcohol dehydrogenase J4G46_06250 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_06255 PF00588 SpoU rRNA Methylase family J4G46_06260 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4G46_06260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4G46_06260 PF14579 Helix-hairpin-helix motif J4G46_06260 PF02811 PHP domain J4G46_06260 PF01336 OB-fold nucleic acid binding domain J4G46_06265 PF00528 Binding-protein-dependent transport system inner membrane component J4G46_06270 PF00005 ABC transporter J4G46_06270 PF09383 NIL domain J4G46_06275 PF03180 NLPA lipoprotein J4G46_06285 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4G46_06285 PF02843 Phosphoribosylglycinamide synthetase, C domain J4G46_06285 PF02844 Phosphoribosylglycinamide synthetase, N domain J4G46_06290 PF01808 AICARFT/IMPCHase bienzyme J4G46_06290 PF02142 MGS-like domain J4G46_06295 PF02954 Bacterial regulatory protein, Fis family J4G46_06325 PF01134 Glucose inhibited division protein A J4G46_06325 PF13932 GidA associated domain J4G46_06340 PF00108 Thiolase, N-terminal domain J4G46_06340 PF02803 Thiolase, C-terminal domain J4G46_06345 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J4G46_06345 PF00561 alpha/beta hydrolase fold J4G46_06355 PF00106 short chain dehydrogenase J4G46_06360 PF01168 Alanine racemase, N-terminal domain J4G46_06360 PF00842 Alanine racemase, C-terminal domain J4G46_06370 PF00772 DnaB-like helicase N terminal domain J4G46_06370 PF03796 DnaB-like helicase C terminal domain J4G46_06375 PF01281 Ribosomal protein L9, N-terminal domain J4G46_06375 PF03948 Ribosomal protein L9, C-terminal domain J4G46_06380 PF01084 Ribosomal protein S18 J4G46_06385 PF01250 Ribosomal protein S6 J4G46_06390 PF01040 UbiA prenyltransferase family J4G46_06395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4G46_06400 PF00510 Cytochrome c oxidase subunit III J4G46_06405 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4G46_06410 PF06481 COX Aromatic Rich Motif J4G46_06410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4G46_06420 PF02896 PEP-utilising enzyme, TIM barrel domain J4G46_06420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4G46_06420 PF00391 PEP-utilising enzyme, mobile domain J4G46_06425 PF03618 Kinase/pyrophosphorylase J4G46_06460 PF03462 PCRF domain J4G46_06460 PF00472 RF-1 domain J4G46_06465 PF13847 Methyltransferase domain J4G46_06465 PF17827 PrmC N-terminal domain J4G46_06470 PF01062 Bestrophin, RFP-TM, chloride channel J4G46_06485 PF00106 short chain dehydrogenase J4G46_06490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_06490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_06490 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_06495 PF00501 AMP-binding enzyme J4G46_06495 PF13193 AMP-binding enzyme C-terminal domain J4G46_06505 PF00899 ThiF family J4G46_06510 PF03109 ABC1 family J4G46_06515 PF02152 Dihydroneopterin aldolase J4G46_06525 PF03232 Ubiquinone biosynthesis protein COQ7 J4G46_06530 PF07690 Major Facilitator Superfamily J4G46_06535 PF01103 Surface antigen J4G46_06535 PF07244 Surface antigen variable number repeat J4G46_06535 PF17243 POTRA domain TamA domain 1 J4G46_06555 PF06434 Aconitate hydratase 2 N-terminus J4G46_06555 PF11791 Aconitate B N-terminal domain J4G46_06555 PF00330 Aconitase family (aconitate hydratase) J4G46_06570 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4G46_06570 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4G46_06570 PF01433 Peptidase family M1 domain J4G46_06580 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_06580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G46_06590 PF00582 Universal stress protein family J4G46_06595 PF00582 Universal stress protein family J4G46_06610 PF03594 Benzoate membrane transport protein J4G46_06615 PF01810 LysE type translocator J4G46_06620 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4G46_06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_06625 PF03466 LysR substrate binding domain J4G46_06635 PF00108 Thiolase, N-terminal domain J4G46_06635 PF02803 Thiolase, C-terminal domain J4G46_06650 PF00144 Beta-lactamase J4G46_06655 PF12170 DNA polymerase III tau subunit V interacting with alpha J4G46_06655 PF12169 DNA polymerase III subunits gamma and tau domain III J4G46_06655 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J4G46_06660 PF03061 Thioesterase superfamily J4G46_06665 PF00465 Iron-containing alcohol dehydrogenase J4G46_06670 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4G46_06675 PF01565 FAD binding domain J4G46_06675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4G46_06690 PF00196 Bacterial regulatory proteins, luxR family J4G46_06690 PF00072 Response regulator receiver domain J4G46_06695 PF13492 GAF domain J4G46_06695 PF07730 Histidine kinase J4G46_06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_06700 PF08007 Cupin superfamily protein J4G46_06705 PF02545 Maf-like protein J4G46_06715 PF00162 Phosphoglycerate kinase J4G46_06725 PF01116 Fructose-bisphosphate aldolase class-II J4G46_06740 PF03328 HpcH/HpaI aldolase/citrate lyase family J4G46_06750 PF00149 Calcineurin-like phosphoesterase J4G46_06755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4G46_06760 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G46_06760 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4G46_06785 PF05958 tRNA (Uracil-5-)-methyltransferase J4G46_06790 PF02146 Sir2 family J4G46_06795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_06795 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_06795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_06800 PF12697 Alpha/beta hydrolase family J4G46_06810 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_06810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G46_06830 PF00117 Glutamine amidotransferase class-I J4G46_06830 PF06418 CTP synthase N-terminus J4G46_06835 PF00793 DAHP synthetase I family J4G46_06840 PF00113 Enolase, C-terminal TIM barrel domain J4G46_06840 PF03952 Enolase, N-terminal domain J4G46_06845 PF04977 Septum formation initiator J4G46_06850 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4G46_06855 PF01098 Cell cycle protein J4G46_06870 PF01385 Probable transposase J4G46_06870 PF07282 Putative transposase DNA-binding domain J4G46_06870 PF12323 Helix-turn-helix domain J4G46_06880 PF02542 YgbB family J4G46_06890 PF00793 DAHP synthetase I family J4G46_06895 PF01925 Sulfite exporter TauE/SafE J4G46_06900 PF02684 Lipid-A-disaccharide synthetase J4G46_06905 PF12833 Helix-turn-helix domain J4G46_06905 PF12852 Cupin J4G46_06910 PF00487 Fatty acid desaturase J4G46_06920 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J4G46_06925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_06925 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_06925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_06930 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_06930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_06930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_06935 PF03109 ABC1 family J4G46_06950 PF05175 Methyltransferase small domain J4G46_06955 PF01264 Chorismate synthase J4G46_06965 PF08173 Membrane bound YbgT-like protein J4G46_06970 PF02322 Cytochrome bd terminal oxidase subunit II J4G46_06975 PF01654 Cytochrome bd terminal oxidase subunit I J4G46_06985 PF07290 Protein of unknown function (DUF1449) J4G46_06995 PF00294 pfkB family carbohydrate kinase J4G46_07005 PF05193 Peptidase M16 inactive domain J4G46_07005 PF00675 Insulinase (Peptidase family M16) J4G46_07005 PF08367 Peptidase M16C associated J4G46_07010 PF02253 Phospholipase A1 J4G46_07015 PF02386 Cation transport protein J4G46_07020 PF02080 TrkA-C domain J4G46_07020 PF02254 TrkA-N domain J4G46_07025 PF00291 Pyridoxal-phosphate dependent enzyme J4G46_07025 PF00585 C-terminal regulatory domain of Threonine dehydratase J4G46_07030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4G46_07055 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G46_07055 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4G46_07065 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4G46_07070 PF10431 C-terminal, D2-small domain, of ClpB protein J4G46_07070 PF02861 Clp amino terminal domain, pathogenicity island component J4G46_07070 PF17871 AAA lid domain J4G46_07070 PF00004 ATPase family associated with various cellular activities (AAA) J4G46_07070 PF07724 AAA domain (Cdc48 subfamily) J4G46_07075 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J4G46_07085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4G46_07085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4G46_07090 PF00440 Bacterial regulatory proteins, tetR family J4G46_07100 PF00285 Citrate synthase, C-terminal domain J4G46_07110 PF00994 Probable molybdopterin binding domain J4G46_07110 PF02464 Competence-damaged protein J4G46_07110 PF18146 Damage-inducible protein CinA KH domain J4G46_07180 PF00929 Exonuclease J4G46_07335 PF07030 Protein of unknown function (DUF1320) J4G46_07435 PF00182 Chitinase class I J4G46_07445 PF11798 IMS family HHH motif J4G46_07445 PF11799 impB/mucB/samB family C-terminal domain J4G46_07445 PF13438 Domain of unknown function (DUF4113) J4G46_07445 PF00817 impB/mucB/samB family J4G46_07450 PF00717 Peptidase S24-like J4G46_07465 PF12832 MFS_1 like family J4G46_07470 PF01425 Amidase J4G46_07475 PF17151 Periplasmic sensor domain J4G46_07475 PF00990 Diguanylate cyclase, GGDEF domain J4G46_07485 PF00924 Mechanosensitive ion channel J4G46_07490 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J4G46_07495 PF06912 Protein of unknown function (DUF1275) J4G46_07500 PF00375 Sodium:dicarboxylate symporter family J4G46_07505 PF01740 STAS domain J4G46_07505 PF00916 Sulfate permease family J4G46_07515 PF01553 Acyltransferase J4G46_07520 PF00291 Pyridoxal-phosphate dependent enzyme J4G46_07525 PF00440 Bacterial regulatory proteins, tetR family J4G46_07525 PF08360 QacR-like protein, C-terminal region J4G46_07530 PF02803 Thiolase, C-terminal domain J4G46_07530 PF00108 Thiolase, N-terminal domain J4G46_07535 PF12146 Serine aminopeptidase, S33 J4G46_07540 PF00108 Thiolase, N-terminal domain J4G46_07540 PF02803 Thiolase, C-terminal domain J4G46_07545 PF01144 Coenzyme A transferase J4G46_07550 PF01144 Coenzyme A transferase J4G46_07555 PF03594 Benzoate membrane transport protein J4G46_07560 PF00106 short chain dehydrogenase J4G46_07565 PF00175 Oxidoreductase NAD-binding domain J4G46_07565 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G46_07565 PF00970 Oxidoreductase FAD-binding domain J4G46_07570 PF00866 Ring hydroxylating beta subunit J4G46_07575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4G46_07575 PF00355 Rieske [2Fe-2S] domain J4G46_07580 PF04444 Catechol dioxygenase N terminus J4G46_07580 PF00775 Dioxygenase J4G46_07585 PF02426 Muconolactone delta-isomerase J4G46_07590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4G46_07590 PF13378 Enolase C-terminal domain-like J4G46_07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_07595 PF03466 LysR substrate binding domain J4G46_07600 PF07690 Major Facilitator Superfamily J4G46_07610 PF00155 Aminotransferase class I and II J4G46_07610 PF00392 Bacterial regulatory proteins, gntR family J4G46_07640 PF01638 HxlR-like helix-turn-helix J4G46_07660 PF02635 DsrE/DsrF-like family J4G46_07665 PF16363 GDP-mannose 4,6 dehydratase J4G46_07670 PF10415 Fumarase C C-terminus J4G46_07670 PF00206 Lyase J4G46_07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_07690 PF03466 LysR substrate binding domain J4G46_07695 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_07695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_07695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_07710 PF00106 short chain dehydrogenase J4G46_07735 PF13091 PLD-like domain J4G46_07740 PF08240 Alcohol dehydrogenase GroES-like domain J4G46_07740 PF00107 Zinc-binding dehydrogenase J4G46_07745 PF00793 DAHP synthetase I family J4G46_07750 PF07690 Major Facilitator Superfamily J4G46_07755 PF01597 Glycine cleavage H-protein J4G46_07760 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G46_07760 PF12833 Helix-turn-helix domain J4G46_07765 PF00664 ABC transporter transmembrane region J4G46_07765 PF00005 ABC transporter J4G46_07780 PF01636 Phosphotransferase enzyme family J4G46_07790 PF00717 Peptidase S24-like J4G46_07795 PF11798 IMS family HHH motif J4G46_07795 PF11799 impB/mucB/samB family C-terminal domain J4G46_07795 PF00817 impB/mucB/samB family J4G46_07795 PF13438 Domain of unknown function (DUF4113) J4G46_07810 PF18381 YcaO cyclodehydratase C-terminal domain J4G46_07810 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J4G46_07815 PF02627 Carboxymuconolactone decarboxylase family J4G46_07830 PF13098 Thioredoxin-like domain J4G46_07830 PF02683 Cytochrome C biogenesis protein transmembrane region J4G46_07830 PF11412 Disulphide bond corrector protein DsbC J4G46_07840 PF00486 Transcriptional regulatory protein, C terminal J4G46_07840 PF00072 Response regulator receiver domain J4G46_07845 PF08521 Two-component sensor kinase N-terminal J4G46_07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_07845 PF00512 His Kinase A (phospho-acceptor) domain J4G46_07850 PF01220 Dehydroquinase class II J4G46_07855 PF00364 Biotin-requiring enzyme J4G46_07860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G46_07860 PF02785 Biotin carboxylase C-terminal domain J4G46_07860 PF00289 Biotin carboxylase, N-terminal domain J4G46_07865 PF12697 Alpha/beta hydrolase family J4G46_07870 PF00753 Metallo-beta-lactamase superfamily J4G46_07880 PF04143 Sulphur transport J4G46_07890 PF04073 Aminoacyl-tRNA editing domain J4G46_07895 PF02690 Na+/Pi-cotransporter J4G46_07945 PF00448 SRP54-type protein, GTPase domain J4G46_07945 PF02881 SRP54-type protein, helical bundle domain J4G46_07950 PF00675 Insulinase (Peptidase family M16) J4G46_07950 PF05193 Peptidase M16 inactive domain J4G46_07980 PF00571 CBS domain J4G46_07985 PF00291 Pyridoxal-phosphate dependent enzyme J4G46_07995 PF17862 AAA+ lid domain J4G46_07995 PF01434 Peptidase family M41 J4G46_07995 PF00004 ATPase family associated with various cellular activities (AAA) J4G46_08005 PF05166 YcgL domain J4G46_08010 PF01612 3'-5' exonuclease J4G46_08010 PF00570 HRDC domain J4G46_08015 PF13662 Toprim domain J4G46_08015 PF02132 RecR protein J4G46_08020 PF02575 YbaB/EbfC DNA-binding family J4G46_08025 PF01053 Cys/Met metabolism PLP-dependent enzyme J4G46_08035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4G46_08035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4G46_08045 PF01230 HIT domain J4G46_08050 PF00267 Gram-negative porin J4G46_08070 PF09312 SurA N-terminal domain J4G46_08075 PF00216 Bacterial DNA-binding protein J4G46_08090 PF02082 Transcriptional regulator J4G46_08095 PF00266 Aminotransferase class-V J4G46_08100 PF01592 NifU-like N terminal domain J4G46_08105 PF01521 Iron-sulphur cluster biosynthesis J4G46_08110 PF00226 DnaJ domain J4G46_08110 PF07743 HSCB C-terminal oligomerisation domain J4G46_08115 PF00012 Hsp70 protein J4G46_08120 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G46_08125 PF00211 Adenylate and Guanylate cyclase catalytic domain J4G46_08135 PF00270 DEAD/DEAH box helicase J4G46_08135 PF00271 Helicase conserved C-terminal domain J4G46_08135 PF03461 TRCF domain J4G46_08135 PF02559 CarD-like/TRCF domain J4G46_08135 PF17757 UvrB interaction domain J4G46_08150 PF03737 Aldolase/RraA J4G46_08155 PF13460 NAD(P)H-binding J4G46_08160 PF01649 Ribosomal protein S20 J4G46_08165 PF00041 Fibronectin type III domain J4G46_08165 PF12561 ToxR activated gene A lipoprotein domain J4G46_08175 PF00459 Inositol monophosphatase family J4G46_08195 PF13419 Haloacid dehalogenase-like hydrolase J4G46_08200 PF01479 S4 domain J4G46_08205 PF00154 recA bacterial DNA recombination protein J4G46_08210 PF02631 RecX family J4G46_08225 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4G46_08225 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_08230 PF07977 FabA-like domain J4G46_08235 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4G46_08235 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_08245 PF07244 Surface antigen variable number repeat J4G46_08245 PF01103 Surface antigen J4G46_08250 PF13180 PDZ domain J4G46_08250 PF17820 PDZ domain J4G46_08250 PF02163 Peptidase family M50 J4G46_08255 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4G46_08255 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4G46_08255 PF13288 DXP reductoisomerase C-terminal domain J4G46_08265 PF01255 Putative undecaprenyl diphosphate synthase J4G46_08270 PF01765 Ribosome recycling factor J4G46_08275 PF00696 Amino acid kinase family J4G46_08280 PF00919 Uncharacterized protein family UPF0004 J4G46_08280 PF04055 Radical SAM superfamily J4G46_08280 PF18693 TRAM domain J4G46_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_08285 PF00512 His Kinase A (phospho-acceptor) domain J4G46_08285 PF00989 PAS fold J4G46_08290 PF02954 Bacterial regulatory protein, Fis family J4G46_08290 PF00072 Response regulator receiver domain J4G46_08290 PF00158 Sigma-54 interaction domain J4G46_08300 PF13291 ACT domain J4G46_08300 PF04607 Region found in RelA / SpoT proteins J4G46_08300 PF02824 TGS domain J4G46_08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_08305 PF03466 LysR substrate binding domain J4G46_08310 PF00557 Metallopeptidase family M24 J4G46_08315 PF12323 Helix-turn-helix domain J4G46_08315 PF07282 Putative transposase DNA-binding domain J4G46_08315 PF01385 Probable transposase J4G46_08320 PF00145 C-5 cytosine-specific DNA methylase J4G46_08320 PF13411 MerR HTH family regulatory protein J4G46_08325 PF05525 Branched-chain amino acid transport protein J4G46_08345 PF03471 Transporter associated domain J4G46_08345 PF03741 Integral membrane protein TerC family J4G46_08360 PF00171 Aldehyde dehydrogenase family J4G46_08365 PF01274 Malate synthase J4G46_08370 PF03969 AFG1-like ATPase J4G46_08375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G46_08375 PF12833 Helix-turn-helix domain J4G46_08380 PF00743 Flavin-binding monooxygenase-like J4G46_08385 PF03956 Lysine exporter LysO J4G46_08390 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4G46_08400 PF00216 Bacterial DNA-binding protein J4G46_08405 PF00575 S1 RNA binding domain J4G46_08410 PF02224 Cytidylate kinase J4G46_08420 PF14437 MafB19-like deaminase J4G46_08430 PF03167 Uracil DNA glycosylase superfamily J4G46_08440 PF03934 Type II secretion system (T2SS), protein K J4G46_08445 PF07963 Prokaryotic N-terminal methylation motif J4G46_08445 PF11612 Type II secretion system (T2SS), protein J J4G46_08450 PF07963 Prokaryotic N-terminal methylation motif J4G46_08450 PF02501 Type II secretion system (T2SS), protein I J4G46_08455 PF07963 Prokaryotic N-terminal methylation motif J4G46_08465 PF01026 TatD related DNase J4G46_08475 PF09115 DNA polymerase III, delta subunit, C terminal J4G46_08480 PF02348 Cytidylyltransferase J4G46_08485 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4G46_08490 PF00664 ABC transporter transmembrane region J4G46_08490 PF00005 ABC transporter J4G46_08500 PF01618 MotA/TolQ/ExbB proton channel family J4G46_08505 PF02195 ParB-like nuclease domain J4G46_08505 PF17762 HTH domain found in ParB protein J4G46_08510 PF13614 AAA domain J4G46_08515 PF02527 rRNA small subunit methyltransferase G J4G46_08520 PF00483 Nucleotidyl transferase J4G46_08525 PF01636 Phosphotransferase enzyme family J4G46_08530 PF04453 LPS transport system D J4G46_08530 PF03968 OstA-like protein J4G46_08535 PF00639 PPIC-type PPIASE domain J4G46_08535 PF09312 SurA N-terminal domain J4G46_08540 PF17209 Hfq protein J4G46_08550 PF01119 DNA mismatch repair protein, C-terminal domain J4G46_08550 PF08676 MutL C terminal dimerisation domain J4G46_08555 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4G46_08560 PF01479 S4 domain J4G46_08560 PF00849 RNA pseudouridylate synthase J4G46_08575 PF01479 S4 domain J4G46_08575 PF00849 RNA pseudouridylate synthase J4G46_08580 PF04284 Protein of unknown function (DUF441) J4G46_08585 PF07690 Major Facilitator Superfamily J4G46_08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_08590 PF03466 LysR substrate binding domain J4G46_08595 PF00027 Cyclic nucleotide-binding domain J4G46_08595 PF00520 Ion transport protein J4G46_08600 PF14493 Helix-turn-helix domain J4G46_08600 PF05970 PIF1-like helicase J4G46_08610 PF00465 Iron-containing alcohol dehydrogenase J4G46_08625 PF00171 Aldehyde dehydrogenase family J4G46_08630 PF04264 YceI-like domain J4G46_08645 PF02779 Transketolase, pyrimidine binding domain J4G46_08645 PF02780 Transketolase, C-terminal domain J4G46_08645 PF00456 Transketolase, thiamine diphosphate binding domain J4G46_08650 PF02772 S-adenosylmethionine synthetase, central domain J4G46_08650 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4G46_08650 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4G46_08670 PF01810 LysE type translocator J4G46_08685 PF02075 Crossover junction endodeoxyribonuclease RuvC J4G46_08690 PF01256 Carbohydrate kinase J4G46_08690 PF03853 YjeF-related protein N-terminus J4G46_08695 PF08331 Domain of unknown function (DUF1730) J4G46_08700 PF06968 Biotin and Thiamin Synthesis associated domain J4G46_08700 PF04055 Radical SAM superfamily J4G46_08710 PF02654 Cobalamin-5-phosphate synthase J4G46_08720 PF02277 Phosphoribosyltransferase J4G46_08725 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J4G46_08735 PF03848 Tellurite resistance protein TehB J4G46_08735 PF09313 Domain of unknown function (DUF1971) J4G46_08740 PF13356 Arm DNA-binding domain J4G46_08740 PF00589 Phage integrase family J4G46_08750 PF00149 Calcineurin-like phosphoesterase J4G46_08765 PF12102 Domain of unknown function (DUF3578) J4G46_08765 PF07728 AAA domain (dynein-related subfamily) J4G46_08780 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G46_08795 PF13817 IS66 C-terminal element J4G46_08795 PF13007 Transposase C of IS166 homeodomain J4G46_08795 PF03050 Transposase IS66 family J4G46_08795 PF13005 zinc-finger binding domain of transposase IS66 J4G46_08840 PF00109 Beta-ketoacyl synthase, N-terminal domain J4G46_08840 PF02801 Beta-ketoacyl synthase, C-terminal domain J4G46_08855 PF00109 Beta-ketoacyl synthase, N-terminal domain J4G46_08855 PF02801 Beta-ketoacyl synthase, C-terminal domain J4G46_08865 PF04820 Tryptophan halogenase J4G46_08885 PF00221 Aromatic amino acid lyase J4G46_08900 PF07977 FabA-like domain J4G46_08910 PF00550 Phosphopantetheine attachment site J4G46_08915 PF00550 Phosphopantetheine attachment site J4G46_08945 PF00872 Transposase, Mutator family J4G46_08990 PF05860 haemagglutination activity domain J4G46_08990 PF04829 Pre-toxin domain with VENN motif J4G46_08990 PF13332 Hemagglutinin repeat J4G46_08990 PF13018 Extended Signal Peptide of Type V secretion system J4G46_08995 PF02794 RTX toxin acyltransferase family J4G46_09000 PF08479 POTRA domain, ShlB-type J4G46_09000 PF17287 POTRA domain J4G46_09000 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J4G46_09030 PF00005 ABC transporter J4G46_09030 PF12848 ABC transporter J4G46_09050 PF13007 Transposase C of IS166 homeodomain J4G46_09050 PF13817 IS66 C-terminal element J4G46_09050 PF03050 Transposase IS66 family J4G46_09050 PF13005 zinc-finger binding domain of transposase IS66 J4G46_09070 PF18766 SWI2/SNF2 ATPase J4G46_09070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4G46_09070 PF11867 Domain of unknown function (DUF3387) J4G46_09075 PF01420 Type I restriction modification DNA specificity domain J4G46_09110 PF08241 Methyltransferase domain J4G46_09190 PF01709 Transcriptional regulator J4G46_09210 PF01926 50S ribosome-binding GTPase J4G46_09210 PF06071 Protein of unknown function (DUF933) J4G46_09220 PF03591 AzlC protein J4G46_09225 PF05437 Branched-chain amino acid transport protein (AzlD) J4G46_09230 PF02222 ATP-grasp domain J4G46_09235 PF01909 Nucleotidyltransferase domain J4G46_09235 PF01966 HD domain J4G46_09235 PF08335 GlnD PII-uridylyltransferase J4G46_09240 PF00155 Aminotransferase class I and II J4G46_09245 PF00255 Glutathione peroxidase J4G46_09250 PF01641 SelR domain J4G46_09255 PF00155 Aminotransferase class I and II J4G46_09260 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4G46_09260 PF00753 Metallo-beta-lactamase superfamily J4G46_09290 PF03793 PASTA domain J4G46_09290 PF00069 Protein kinase domain J4G46_09315 PF00814 Glycoprotease family J4G46_09320 PF01165 Ribosomal protein S21 J4G46_09325 PF09424 Yqey-like protein J4G46_09340 PF01435 Peptidase family M48 J4G46_09345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4G46_09345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4G46_09360 PF00156 Phosphoribosyl transferase domain J4G46_09365 PF02674 Colicin V production protein J4G46_09370 PF01180 Dihydroorotate dehydrogenase J4G46_09390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4G46_09390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4G46_09395 PF00881 Nitroreductase family J4G46_09405 PF00270 DEAD/DEAH box helicase J4G46_09405 PF00271 Helicase conserved C-terminal domain J4G46_09410 PF00313 'Cold-shock' DNA-binding domain J4G46_09420 PF00140 Sigma-70 factor, region 1.2 J4G46_09420 PF04542 Sigma-70 region 2 J4G46_09420 PF04545 Sigma-70, region 4 J4G46_09425 PF04241 Protein of unknown function (DUF423) J4G46_09435 PF05690 Thiazole biosynthesis protein ThiG J4G46_09440 PF00043 Glutathione S-transferase, C-terminal domain J4G46_09440 PF02798 Glutathione S-transferase, N-terminal domain J4G46_09445 PF00916 Sulfate permease family J4G46_09445 PF01740 STAS domain J4G46_09450 PF02390 Putative methyltransferase J4G46_09470 PF04055 Radical SAM superfamily J4G46_09470 PF06968 Biotin and Thiamin Synthesis associated domain J4G46_09475 PF13193 AMP-binding enzyme C-terminal domain J4G46_09475 PF00501 AMP-binding enzyme J4G46_09480 PF00440 Bacterial regulatory proteins, tetR family J4G46_09480 PF17925 Tetracyclin repressor-like, C-terminal domain J4G46_09485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_09485 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_09485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4G46_09490 PF01039 Carboxyl transferase domain J4G46_09495 PF00378 Enoyl-CoA hydratase/isomerase J4G46_09500 PF18140 Propionyl-coenzyme A carboxylase BT domain J4G46_09500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G46_09500 PF02785 Biotin carboxylase C-terminal domain J4G46_09500 PF00289 Biotin carboxylase, N-terminal domain J4G46_09500 PF00364 Biotin-requiring enzyme J4G46_09505 PF00682 HMGL-like J4G46_09510 PF01144 Coenzyme A transferase J4G46_09515 PF01144 Coenzyme A transferase J4G46_09520 PF00691 OmpA family J4G46_09520 PF01389 OmpA-like transmembrane domain J4G46_09525 PF01979 Amidohydrolase family J4G46_09530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4G46_09530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4G46_09540 PF10672 S-adenosylmethionine-dependent methyltransferase J4G46_09540 PF02926 THUMP domain J4G46_09540 PF01170 Putative RNA methylase family UPF0020 J4G46_09550 PF00004 ATPase family associated with various cellular activities (AAA) J4G46_09550 PF10431 C-terminal, D2-small domain, of ClpB protein J4G46_09550 PF07724 AAA domain (Cdc48 subfamily) J4G46_09550 PF17871 AAA lid domain J4G46_09550 PF02861 Clp amino terminal domain, pathogenicity island component J4G46_09555 PF02566 OsmC-like protein J4G46_09560 PF00027 Cyclic nucleotide-binding domain J4G46_09560 PF13545 Crp-like helix-turn-helix domain J4G46_09565 PF00248 Aldo/keto reductase family J4G46_09580 PF00709 Adenylosuccinate synthetase J4G46_09585 PF13393 Histidyl-tRNA synthetase J4G46_09595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4G46_09595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4G46_09600 PF01411 tRNA synthetases class II (A) J4G46_09600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4G46_09600 PF02272 DHHA1 domain J4G46_09605 PF00696 Amino acid kinase family J4G46_09605 PF13840 ACT domain J4G46_09605 PF01842 ACT domain J4G46_09610 PF02599 Global regulator protein family J4G46_09615 PF01351 Ribonuclease HII J4G46_09645 PF00962 Adenosine/AMP deaminase J4G46_09650 PF00860 Permease family J4G46_09670 PF11992 Domain of unknown function (DUF3488) J4G46_09670 PF01841 Transglutaminase-like superfamily J4G46_09670 PF13559 Domain of unknown function (DUF4129) J4G46_09680 PF17863 AAA lid domain J4G46_09680 PF07726 ATPase family associated with various cellular activities (AAA) J4G46_09685 PF04328 Selenoprotein, putative J4G46_09690 PF02554 Carbon starvation protein CstA J4G46_09690 PF13722 5TM C-terminal transporter carbon starvation CstA J4G46_09695 PF08207 Elongation factor P (EF-P) KOW-like domain J4G46_09695 PF09285 Elongation factor P, C-terminal J4G46_09695 PF01132 Elongation factor P (EF-P) OB domain J4G46_09700 PF04055 Radical SAM superfamily J4G46_09715 PF01197 Ribosomal protein L31 J4G46_09720 PF13593 SBF-like CPA transporter family (DUF4137) J4G46_09725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4G46_09730 PF07690 Major Facilitator Superfamily J4G46_09735 PF13654 AAA domain J4G46_09735 PF05362 Lon protease (S16) C-terminal proteolytic domain J4G46_09740 PF00462 Glutaredoxin J4G46_09745 PF00202 Aminotransferase class-III J4G46_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_09750 PF03466 LysR substrate binding domain J4G46_09755 PF01551 Peptidase family M23 J4G46_09755 PF01476 LysM domain J4G46_09760 PF01975 Survival protein SurE J4G46_09775 PF07943 Penicillin-binding protein 5, C-terminal domain J4G46_09775 PF00768 D-alanyl-D-alanine carboxypeptidase J4G46_09780 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_09790 PF00293 NUDIX domain J4G46_09800 PF04356 Protein of unknown function (DUF489) J4G46_09805 PF00206 Lyase J4G46_09805 PF08328 Adenylosuccinate lyase C-terminal J4G46_09820 PF08496 Peptidase family S49 N-terminal J4G46_09820 PF01343 Peptidase family S49 J4G46_09830 PF00005 ABC transporter J4G46_09835 PF00528 Binding-protein-dependent transport system inner membrane component J4G46_09840 PF00528 Binding-protein-dependent transport system inner membrane component J4G46_09850 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4G46_09855 PF00202 Aminotransferase class-III J4G46_09865 PF00696 Amino acid kinase family J4G46_09865 PF01472 PUA domain J4G46_09870 PF01018 GTP1/OBG J4G46_09870 PF01926 50S ribosome-binding GTPase J4G46_09880 PF07690 Major Facilitator Superfamily J4G46_09885 PF01638 HxlR-like helix-turn-helix J4G46_09890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4G46_09890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4G46_09895 PF00892 EamA-like transporter family J4G46_09905 PF00271 Helicase conserved C-terminal domain J4G46_09905 PF04851 Type III restriction enzyme, res subunit J4G46_09905 PF02151 UvrB/uvrC motif J4G46_09905 PF12344 Ultra-violet resistance protein B J4G46_09905 PF17757 UvrB interaction domain J4G46_09920 PF00155 Aminotransferase class I and II J4G46_09925 PF00892 EamA-like transporter family J4G46_09940 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4G46_09945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4G46_09950 PF02565 Recombination protein O C terminal J4G46_09950 PF11967 Recombination protein O N terminal J4G46_09960 PF07650 KH domain J4G46_09960 PF01926 50S ribosome-binding GTPase J4G46_09965 PF00035 Double-stranded RNA binding motif J4G46_09965 PF14622 Ribonuclease-III-like J4G46_09975 PF10502 Signal peptidase, peptidase S26 J4G46_09980 PF00009 Elongation factor Tu GTP binding domain J4G46_09980 PF03144 Elongation factor Tu domain 2 J4G46_09980 PF06421 GTP-binding protein LepA C-terminus J4G46_09980 PF00679 Elongation factor G C-terminus J4G46_09990 PF13180 PDZ domain J4G46_09995 PF00890 FAD binding domain J4G46_09995 PF02910 Fumarate reductase flavoprotein C-term J4G46_10000 PF13419 Haloacid dehalogenase-like hydrolase J4G46_10010 PF02223 Thymidylate kinase J4G46_10015 PF02618 YceG-like family J4G46_10035 PF00528 Binding-protein-dependent transport system inner membrane component J4G46_10040 PF00528 Binding-protein-dependent transport system inner membrane component J4G46_10045 PF12857 TOBE-like domain J4G46_10045 PF00005 ABC transporter J4G46_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_10050 PF03466 LysR substrate binding domain J4G46_10065 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_10065 PF14602 Hexapeptide repeat of succinyl-transferase J4G46_10065 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J4G46_10075 PF06508 Queuosine biosynthesis protein QueC J4G46_10085 PF00578 AhpC/TSA family J4G46_10090 PF00293 NUDIX domain J4G46_10090 PF01467 Cytidylyltransferase-like J4G46_10095 PF00378 Enoyl-CoA hydratase/isomerase J4G46_10100 PF00881 Nitroreductase family J4G46_10105 PF01784 NIF3 (NGG1p interacting factor 3) J4G46_10110 PF01966 HD domain J4G46_10115 PF07499 RuvA, C-terminal domain J4G46_10115 PF01330 RuvA N terminal domain J4G46_10120 PF17864 RuvB AAA lid domain J4G46_10120 PF05491 RuvB C-terminal winged helix domain J4G46_10120 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4G46_10130 PF03061 Thioesterase superfamily J4G46_10135 PF01618 MotA/TolQ/ExbB proton channel family J4G46_10140 PF02472 Biopolymer transport protein ExbD/TolR J4G46_10150 PF07676 WD40-like Beta Propeller Repeat J4G46_10150 PF04052 TolB amino-terminal domain J4G46_10155 PF00691 OmpA family J4G46_10165 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4G46_10170 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4G46_10170 PF00588 SpoU rRNA Methylase family J4G46_10200 PF11638 DnaA N-terminal domain J4G46_10200 PF08299 Bacterial dnaA protein helix-turn-helix J4G46_10200 PF00308 Bacterial dnaA protein J4G46_10205 PF01594 AI-2E family transporter J4G46_10210 PF00586 AIR synthase related protein, N-terminal domain J4G46_10210 PF02769 AIR synthase related protein, C-terminal domain J4G46_10215 PF00551 Formyl transferase J4G46_10225 PF01343 Peptidase family S49 J4G46_10225 PF06965 Na+/H+ antiporter 1 J4G46_10235 PF03772 Competence protein J4G46_10235 PF13567 Domain of unknown function (DUF4131) J4G46_10235 PF00753 Metallo-beta-lactamase superfamily J4G46_10240 PF00005 ABC transporter J4G46_10245 PF02687 FtsX-like permease family J4G46_10245 PF12704 MacB-like periplasmic core domain J4G46_10265 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4G46_10280 PF00266 Aminotransferase class-V J4G46_10310 PF13533 Biotin-lipoyl like J4G46_10330 PF03989 DNA gyrase C-terminal domain, beta-propeller J4G46_10330 PF00521 DNA gyrase/topoisomerase IV, subunit A J4G46_10340 PF00766 Electron transfer flavoprotein FAD-binding domain J4G46_10340 PF01012 Electron transfer flavoprotein domain J4G46_10345 PF01012 Electron transfer flavoprotein domain J4G46_10355 PF00589 Phage integrase family J4G46_10355 PF02899 Phage integrase, N-terminal SAM-like domain J4G46_10360 PF00561 alpha/beta hydrolase fold J4G46_10365 PF01678 Diaminopimelate epimerase J4G46_10370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4G46_10370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4G46_10380 PF01235 Sodium:alanine symporter family J4G46_10385 PF18073 Rubredoxin metal binding domain J4G46_10395 PF17820 PDZ domain J4G46_10395 PF13180 PDZ domain J4G46_10400 PF01784 NIF3 (NGG1p interacting factor 3) J4G46_10405 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4G46_10405 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4G46_10440 PF01040 UbiA prenyltransferase family J4G46_10445 PF04345 Chorismate lyase J4G46_10450 PF00120 Glutamine synthetase, catalytic domain J4G46_10450 PF03951 Glutamine synthetase, beta-Grasp domain J4G46_10455 PF00117 Glutamine amidotransferase class-I J4G46_10460 PF02885 Glycosyl transferase family, helical bundle domain J4G46_10460 PF00591 Glycosyl transferase family, a/b domain J4G46_10465 PF00218 Indole-3-glycerol phosphate synthase J4G46_10475 PF01227 GTP cyclohydrolase I J4G46_10480 PF00990 Diguanylate cyclase, GGDEF domain J4G46_10495 PF05675 Protein of unknown function (DUF817) J4G46_10500 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4G46_10510 PF17954 Quercetinase C-terminal cupin domain J4G46_10510 PF02678 Pirin J4G46_10525 PF00775 Dioxygenase J4G46_10525 PF04444 Catechol dioxygenase N terminus J4G46_10530 PF00111 2Fe-2S iron-sulfur cluster binding domain J4G46_10530 PF00175 Oxidoreductase NAD-binding domain J4G46_10530 PF00970 Oxidoreductase FAD-binding domain J4G46_10540 PF02332 Methane/Phenol/Toluene Hydroxylase J4G46_10540 PF04945 YHS domain J4G46_10545 PF02406 MmoB/DmpM family J4G46_10550 PF02332 Methane/Phenol/Toluene Hydroxylase J4G46_10555 PF06099 Phenol hydroxylase subunit J4G46_10560 PF00158 Sigma-54 interaction domain J4G46_10560 PF02954 Bacterial regulatory protein, Fis family J4G46_10560 PF02830 V4R domain J4G46_10560 PF06505 Activator of aromatic catabolism J4G46_10595 PF00009 Elongation factor Tu GTP binding domain J4G46_10600 PF01507 Phosphoadenosine phosphosulfate reductase family J4G46_10610 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB J4G46_10615 PF01381 Helix-turn-helix J4G46_10620 PF00152 tRNA synthetases class II (D, K and N) J4G46_10620 PF01336 OB-fold nucleic acid binding domain J4G46_10630 PF00156 Phosphoribosyl transferase domain J4G46_10635 PF00301 Rubredoxin J4G46_10640 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_10640 PF18113 Rubredoxin binding C-terminal domain J4G46_10645 PF00561 alpha/beta hydrolase fold J4G46_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_10650 PF03466 LysR substrate binding domain J4G46_10660 PF13090 Polyphosphate kinase C-terminal domain 2 J4G46_10660 PF02503 Polyphosphate kinase middle domain J4G46_10660 PF17941 Polyphosphate kinase C-terminal domain 1 J4G46_10660 PF13089 Polyphosphate kinase N-terminal domain J4G46_10665 PF00912 Transglycosylase J4G46_10670 PF01694 Rhomboid family J4G46_10680 PF00005 ABC transporter J4G46_10685 PF13472 GDSL-like Lipase/Acylhydrolase family J4G46_10690 PF00484 Carbonic anhydrase J4G46_10695 PF00561 alpha/beta hydrolase fold J4G46_10705 PF01521 Iron-sulphur cluster biosynthesis J4G46_10705 PF01106 NifU-like domain J4G46_10725 PF01384 Phosphate transporter family J4G46_10730 PF02310 B12 binding domain J4G46_10730 PF02607 B12 binding domain J4G46_10730 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4G46_10730 PF00809 Pterin binding enzyme J4G46_10730 PF02574 Homocysteine S-methyltransferase J4G46_10750 PF03449 Transcription elongation factor, N-terminal J4G46_10750 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G46_10755 PF01464 Transglycosylase SLT domain J4G46_10755 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4G46_10765 PF01171 PP-loop family J4G46_10770 PF10145 Phage-related minor tail protein J4G46_10770 PF01551 Peptidase family M23 J4G46_10770 PF01464 Transglycosylase SLT domain J4G46_10775 PF01435 Peptidase family M48 J4G46_10785 PF00571 CBS domain J4G46_10785 PF01769 Divalent cation transporter J4G46_10785 PF03448 MgtE intracellular N domain J4G46_10790 PF00873 AcrB/AcrD/AcrF family J4G46_10805 PF00118 TCP-1/cpn60 chaperonin family J4G46_10810 PF00166 Chaperonin 10 Kd subunit J4G46_10815 PF00149 Calcineurin-like phosphoesterase J4G46_10820 PF00781 Diacylglycerol kinase catalytic domain J4G46_10825 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain J4G46_10825 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain J4G46_10845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4G46_10845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4G46_10865 PF09423 PhoD-like phosphatase J4G46_10865 PF16655 PhoD-like phosphatase, N-terminal domain J4G46_10885 PF00809 Pterin binding enzyme J4G46_10895 PF00004 ATPase family associated with various cellular activities (AAA) J4G46_10895 PF06480 FtsH Extracellular J4G46_10895 PF01434 Peptidase family M41 J4G46_10895 PF17862 AAA+ lid domain J4G46_10900 PF01728 FtsJ-like methyltransferase J4G46_10905 PF01985 CRS1 / YhbY (CRM) domain J4G46_10920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4G46_10920 PF00117 Glutamine amidotransferase class-I J4G46_10925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4G46_10925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4G46_10925 PF02142 MGS-like domain J4G46_10930 PF01272 Transcription elongation factor, GreA/GreB, C-term J4G46_10930 PF03449 Transcription elongation factor, N-terminal J4G46_10940 PF00132 Bacterial transferase hexapeptide (six repeats) J4G46_10945 PF00582 Universal stress protein family J4G46_10950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4G46_10955 PF04228 Putative neutral zinc metallopeptidase J4G46_10960 PF05661 Protein of unknown function (DUF808) J4G46_10965 PF00579 tRNA synthetases class I (W and Y) J4G46_10970 PF02629 CoA binding domain J4G46_10970 PF00549 CoA-ligase J4G46_10975 PF08442 ATP-grasp domain J4G46_10975 PF00549 CoA-ligase J4G46_10980 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_10980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G46_10985 PF02817 e3 binding domain J4G46_10985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4G46_10985 PF00364 Biotin-requiring enzyme J4G46_10990 PF16870 2-oxoglutarate dehydrogenase C-terminal J4G46_10990 PF02779 Transketolase, pyrimidine binding domain J4G46_10990 PF16078 2-oxoglutarate dehydrogenase N-terminus J4G46_10990 PF00676 Dehydrogenase E1 component J4G46_10995 PF13085 2Fe-2S iron-sulfur cluster binding domain J4G46_11000 PF00890 FAD binding domain J4G46_11000 PF02910 Fumarate reductase flavoprotein C-term J4G46_11005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4G46_11010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4G46_11015 PF00285 Citrate synthase, C-terminal domain J4G46_11020 PF04717 Type VI secretion system, phage-baseplate injector J4G46_11020 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J4G46_11020 PF13296 Putative type VI secretion system Rhs element Vgr J4G46_11025 PF00795 Carbon-nitrogen hydrolase J4G46_11025 PF02540 NAD synthase J4G46_11050 PF00037 4Fe-4S binding domain J4G46_11055 PF01467 Cytidylyltransferase-like J4G46_11060 PF01668 SmpB protein J4G46_11065 PF03358 NADPH-dependent FMN reductase J4G46_11070 PF02578 Multi-copper polyphenol oxidoreductase laccase J4G46_11075 PF01479 S4 domain J4G46_11075 PF00849 RNA pseudouridylate synthase J4G46_11080 PF13525 Outer membrane lipoprotein J4G46_11085 PF01807 CHC2 zinc finger J4G46_11085 PF08275 DNA primase catalytic core, N-terminal domain J4G46_11085 PF08278 DNA primase DnaG DnaB-binding J4G46_11085 PF10410 DnaB-helicase binding domain of primase J4G46_11090 PF01488 Shikimate / quinate 5-dehydrogenase J4G46_11090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4G46_11090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4G46_11100 PF03550 Outer membrane lipoprotein LolB J4G46_11105 PF00288 GHMP kinases N terminal domain J4G46_11105 PF08544 GHMP kinases C terminal J4G46_11130 PF14572 Phosphoribosyl synthetase-associated domain J4G46_11130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4G46_11135 PF01386 Ribosomal L25p family J4G46_11140 PF01195 Peptidyl-tRNA hydrolase J4G46_11145 PF02261 Aspartate decarboxylase J4G46_11155 PF00581 Rhodanese-like domain J4G46_11155 PF17773 UPF0176 acylphosphatase like domain J4G46_11165 PF09335 SNARE associated Golgi protein J4G46_11190 PF04546 Sigma-70, non-essential region J4G46_11190 PF03979 Sigma-70 factor, region 1.1 J4G46_11190 PF04542 Sigma-70 region 2 J4G46_11190 PF04539 Sigma-70 region 3 J4G46_11190 PF04545 Sigma-70, region 4 J4G46_11190 PF00140 Sigma-70 factor, region 1.2 J4G46_11195 PF04359 Protein of unknown function (DUF493) J4G46_11200 PF03099 Biotin/lipoate A/B protein ligase family J4G46_11210 PF00465 Iron-containing alcohol dehydrogenase J4G46_11215 PF13520 Amino acid permease J4G46_11220 PF00588 SpoU rRNA Methylase family J4G46_11225 PF10414 Sirohaem synthase dimerisation region J4G46_11225 PF14824 Sirohaem biosynthesis protein central J4G46_11225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4G46_11230 PF02403 Seryl-tRNA synthetase N-terminal domain J4G46_11230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4G46_11245 PF03548 Outer membrane lipoprotein carrier protein LolA J4G46_11250 PF01016 Ribosomal L27 protein J4G46_11255 PF00829 Ribosomal prokaryotic L21 protein J4G46_11260 PF00348 Polyprenyl synthetase J4G46_11270 PF01569 PAP2 superfamily J4G46_11275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G46_11275 PF00529 HlyD membrane-fusion protein of T1SS J4G46_11280 PF00873 AcrB/AcrD/AcrF family J4G46_11285 PF02321 Outer membrane efflux protein J4G46_11290 PF01906 Putative heavy-metal-binding J4G46_11295 PF01906 Putative heavy-metal-binding J4G46_11315 PF10458 Valyl tRNA synthetase tRNA binding arm J4G46_11315 PF00133 tRNA synthetases class I (I, L, M and V) J4G46_11315 PF08264 Anticodon-binding domain of tRNA J4G46_11330 PF04239 Protein of unknown function (DUF421) J4G46_11345 PF01734 Patatin-like phospholipase J4G46_11355 PF01145 SPFH domain / Band 7 family J4G46_11360 PF00474 Sodium:solute symporter family J4G46_11365 PF00672 HAMP domain J4G46_11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_11365 PF00512 His Kinase A (phospho-acceptor) domain J4G46_11370 PF00072 Response regulator receiver domain J4G46_11370 PF00486 Transcriptional regulatory protein, C terminal J4G46_11375 PF00317 Ribonucleotide reductase, all-alpha domain J4G46_11375 PF02867 Ribonucleotide reductase, barrel domain J4G46_11375 PF03477 ATP cone domain J4G46_11390 PF00268 Ribonucleotide reductase, small chain J4G46_11410 PF04972 BON domain J4G46_11410 PF01476 LysM domain J4G46_11415 PF00550 Phosphopantetheine attachment site J4G46_11425 PF00698 Acyl transferase domain J4G46_11430 PF01783 Ribosomal L32p protein family J4G46_11435 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4G46_11440 PF04315 Elongation factor P hydroxylase J4G46_11445 PF01300 Telomere recombination J4G46_11455 PF02616 Segregation and condensation protein ScpA J4G46_11460 PF04079 Segregation and condensation complex subunit ScpB J4G46_11465 PF00849 RNA pseudouridylate synthase J4G46_11465 PF01479 S4 domain J4G46_11480 PF00155 Aminotransferase class I and II J4G46_11485 PF06968 Biotin and Thiamin Synthesis associated domain J4G46_11485 PF00202 Aminotransferase class-III J4G46_11485 PF04055 Radical SAM superfamily J4G46_11490 PF08241 Methyltransferase domain J4G46_11490 PF12697 Alpha/beta hydrolase family J4G46_11495 PF00210 Ferritin-like domain J4G46_11500 PF16363 GDP-mannose 4,6 dehydratase J4G46_11505 PF03120 NAD-dependent DNA ligase OB-fold domain J4G46_11505 PF00533 BRCA1 C Terminus (BRCT) domain J4G46_11505 PF01653 NAD-dependent DNA ligase adenylation domain J4G46_11505 PF12826 Helix-hairpin-helix motif J4G46_11505 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4G46_11510 PF04354 ZipA, C-terminal FtsZ-binding domain J4G46_11515 PF02463 RecF/RecN/SMC N terminal domain J4G46_11515 PF06470 SMC proteins Flexible Hinge Domain J4G46_11525 PF01925 Sulfite exporter TauE/SafE J4G46_11535 PF03309 Type III pantothenate kinase J4G46_11540 PF00448 SRP54-type protein, GTPase domain J4G46_11540 PF02881 SRP54-type protein, helical bundle domain J4G46_11540 PF02978 Signal peptide binding domain J4G46_11550 PF01207 Dihydrouridine synthase (Dus) J4G46_11560 PF07411 Domain of unknown function (DUF1508) J4G46_11565 PF03831 PhnA domain J4G46_11565 PF08274 PhnA Zinc-Ribbon J4G46_11570 PF04343 Protein of unknown function, DUF488 J4G46_11595 PF00849 RNA pseudouridylate synthase J4G46_11625 PF01850 PIN domain J4G46_11630 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4G46_11635 PF00694 Aconitase C-terminal domain J4G46_11635 PF00330 Aconitase family (aconitate hydratase) J4G46_11640 PF01571 Aminomethyltransferase folate-binding domain J4G46_11655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4G46_11660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4G46_11660 PF06827 Zinc finger found in FPG and IleRS J4G46_11660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4G46_11670 PF01741 Large-conductance mechanosensitive channel, MscL J4G46_11675 PF00679 Elongation factor G C-terminus J4G46_11675 PF03144 Elongation factor Tu domain 2 J4G46_11675 PF00009 Elongation factor Tu GTP binding domain J4G46_11680 PF00860 Permease family J4G46_11685 PF08468 Methyltransferase small domain N-terminal J4G46_11685 PF05175 Methyltransferase small domain J4G46_11690 PF00324 Amino acid permease J4G46_11695 PF13505 Outer membrane protein beta-barrel domain J4G46_11695 PF00691 OmpA family J4G46_11705 PF02803 Thiolase, C-terminal domain J4G46_11705 PF00108 Thiolase, N-terminal domain J4G46_11710 PF01113 Dihydrodipicolinate reductase, N-terminus J4G46_11710 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain J4G46_11720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4G46_11720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4G46_11725 PF02515 CoA-transferase family III J4G46_11730 PF12833 Helix-turn-helix domain J4G46_11730 PF02311 AraC-like ligand binding domain J4G46_11735 PF00108 Thiolase, N-terminal domain J4G46_11735 PF02803 Thiolase, C-terminal domain J4G46_11740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4G46_11740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4G46_11740 PF00378 Enoyl-CoA hydratase/isomerase J4G46_11750 PF13673 Acetyltransferase (GNAT) domain J4G46_11760 PF03006 Haemolysin-III related J4G46_11765 PF07690 Major Facilitator Superfamily J4G46_11765 PF00083 Sugar (and other) transporter J4G46_11770 PF00149 Calcineurin-like phosphoesterase J4G46_11770 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4G46_11775 PF13091 PLD-like domain J4G46_11785 PF16360 GTP-binding GTPase Middle Region J4G46_11785 PF13167 GTP-binding GTPase N-terminal J4G46_11785 PF01926 50S ribosome-binding GTPase J4G46_11815 PF00149 Calcineurin-like phosphoesterase J4G46_11820 PF00398 Ribosomal RNA adenine dimethylase J4G46_11825 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4G46_11835 PF00572 Ribosomal protein L13 J4G46_11840 PF00380 Ribosomal protein S9/S16 J4G46_11845 PF00043 Glutathione S-transferase, C-terminal domain J4G46_11845 PF02798 Glutathione S-transferase, N-terminal domain J4G46_11850 PF04386 Stringent starvation protein B J4G46_11890 PF03707 Bacterial signalling protein N terminal repeat J4G46_11890 PF00990 Diguanylate cyclase, GGDEF domain J4G46_11890 PF00563 EAL domain J4G46_11895 PF00691 OmpA family J4G46_11920 PF02445 Quinolinate synthetase A protein J4G46_11925 PF01960 ArgJ family J4G46_11935 PF02810 SEC-C motif J4G46_11935 PF07517 SecA DEAD-like domain J4G46_11935 PF01043 SecA preprotein cross-linking domain J4G46_11935 PF07516 SecA Wing and Scaffold domain J4G46_11940 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4G46_11940 PF00578 AhpC/TSA family J4G46_11950 PF02875 Mur ligase family, glutamate ligase domain J4G46_11950 PF08245 Mur ligase middle domain J4G46_11955 PF01039 Carboxyl transferase domain J4G46_11960 PF00290 Tryptophan synthase alpha chain J4G46_11965 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4G46_11965 PF12833 Helix-turn-helix domain J4G46_11975 PF00929 Exonuclease J4G46_11980 PF03193 RsgA GTPase J4G46_11990 PF00462 Glutaredoxin J4G46_11995 PF02556 Preprotein translocase subunit SecB J4G46_12000 PF04127 DNA / pantothenate metabolism flavoprotein J4G46_12000 PF02441 Flavoprotein J4G46_12005 PF04002 RadC-like JAB domain J4G46_12010 PF01062 Bestrophin, RFP-TM, chloride channel J4G46_12020 PF04279 Intracellular septation protein A J4G46_12025 PF03795 YCII-related domain J4G46_12035 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4G46_12035 PF01266 FAD dependent oxidoreductase J4G46_12045 PF04461 Protein of unknown function (DUF520) J4G46_12055 PF03061 Thioesterase superfamily J4G46_12060 PF00085 Thioredoxin J4G46_12070 PF04273 Putative phosphatase (DUF442) J4G46_12070 PF00753 Metallo-beta-lactamase superfamily J4G46_12085 PF00403 Heavy-metal-associated domain J4G46_12085 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_12085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4G46_12120 PF01066 CDP-alcohol phosphatidyltransferase J4G46_12125 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4G46_12155 PF00056 lactate/malate dehydrogenase, NAD binding domain J4G46_12155 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4G46_12165 PF10145 Phage-related minor tail protein J4G46_12165 PF01551 Peptidase family M23 J4G46_12165 PF01464 Transglycosylase SLT domain J4G46_12170 PF04055 Radical SAM superfamily J4G46_12170 PF01938 TRAM domain J4G46_12170 PF00919 Uncharacterized protein family UPF0004 J4G46_12175 PF02562 PhoH-like protein J4G46_12180 PF02130 Uncharacterized protein family UPF0054 J4G46_12215 PF03358 NADPH-dependent FMN reductase J4G46_12220 PF03631 Virulence factor BrkB J4G46_12235 PF01618 MotA/TolQ/ExbB proton channel family J4G46_12245 PF01842 ACT domain J4G46_12245 PF00551 Formyl transferase J4G46_12250 PF08360 QacR-like protein, C-terminal region J4G46_12250 PF00440 Bacterial regulatory proteins, tetR family J4G46_12255 PF00171 Aldehyde dehydrogenase family J4G46_12260 PF00830 Ribosomal L28 family J4G46_12265 PF00471 Ribosomal protein L33 J4G46_12270 PF00999 Sodium/hydrogen exchanger family J4G46_12270 PF02254 TrkA-N domain J4G46_12285 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J4G46_12290 PF13361 UvrD-like helicase C-terminal domain J4G46_12290 PF00580 UvrD/REP helicase N-terminal domain J4G46_12300 PF08272 Topoisomerase I zinc-ribbon-like J4G46_12300 PF01131 DNA topoisomerase J4G46_12300 PF01751 Toprim domain J4G46_12300 PF01396 Topoisomerase DNA binding C4 zinc finger J4G46_12315 PF04102 SlyX J4G46_12320 PF00005 ABC transporter J4G46_12320 PF16326 ABC transporter C-terminal domain J4G46_12320 PF12848 ABC transporter J4G46_12325 PF03279 Bacterial lipid A biosynthesis acyltransferase J4G46_12340 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G46_12340 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4G46_12355 PF00710 Asparaginase, N-terminal J4G46_12355 PF17763 Glutaminase/Asparaginase C-terminal domain J4G46_12360 PF01416 tRNA pseudouridine synthase J4G46_12370 PF01176 Translation initiation factor 1A / IF-1 J4G46_12380 PF00180 Isocitrate/isopropylmalate dehydrogenase J4G46_12390 PF00694 Aconitase C-terminal domain J4G46_12395 PF00330 Aconitase family (aconitate hydratase) J4G46_12410 PF03466 LysR substrate binding domain J4G46_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_12425 PF00293 NUDIX domain J4G46_12430 PF00391 PEP-utilising enzyme, mobile domain J4G46_12430 PF05524 PEP-utilising enzyme, N-terminal J4G46_12430 PF01590 GAF domain J4G46_12430 PF02896 PEP-utilising enzyme, TIM barrel domain J4G46_12445 PF18158 Adaptive response protein AidB N-terminal domain J4G46_12445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4G46_12445 PF02770 Acyl-CoA dehydrogenase, middle domain J4G46_12455 PF00199 Catalase J4G46_12455 PF06628 Catalase-related immune-responsive J4G46_12460 PF12706 Beta-lactamase superfamily domain J4G46_12470 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_12470 PF14759 Reductase C-terminal J4G46_12475 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J4G46_12480 PF00106 short chain dehydrogenase J4G46_12485 PF00355 Rieske [2Fe-2S] domain J4G46_12490 PF00866 Ring hydroxylating beta subunit J4G46_12495 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J4G46_12495 PF00355 Rieske [2Fe-2S] domain J4G46_12500 PF03466 LysR substrate binding domain J4G46_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_12510 PF00561 alpha/beta hydrolase fold J4G46_12515 PF03573 outer membrane porin, OprD family J4G46_12520 PF07836 DmpG-like communication domain J4G46_12520 PF00682 HMGL-like J4G46_12525 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation J4G46_12525 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4G46_12530 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4G46_12535 PF13419 Haloacid dehalogenase-like hydrolase J4G46_12540 PF00849 RNA pseudouridylate synthase J4G46_12540 PF01479 S4 domain J4G46_12545 PF12111 Polyribonucleotide phosphorylase C terminal J4G46_12545 PF00575 S1 RNA binding domain J4G46_12545 PF10150 Ribonuclease E/G family J4G46_12550 PF13193 AMP-binding enzyme C-terminal domain J4G46_12550 PF00501 AMP-binding enzyme J4G46_12575 PF04024 PspC domain J4G46_12580 PF00571 CBS domain J4G46_12585 PF02091 Glycyl-tRNA synthetase alpha subunit J4G46_12590 PF02092 Glycyl-tRNA synthetase beta subunit J4G46_12590 PF05746 DALR anticodon binding domain J4G46_12615 PF13005 zinc-finger binding domain of transposase IS66 J4G46_12615 PF13007 Transposase C of IS166 homeodomain J4G46_12615 PF13817 IS66 C-terminal element J4G46_12615 PF03050 Transposase IS66 family J4G46_12645 PF08241 Methyltransferase domain J4G46_12655 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4G46_12655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4G46_12665 PF03884 DNA gyrase inhibitor YacG J4G46_12675 PF00753 Metallo-beta-lactamase superfamily J4G46_12680 PF00762 Ferrochelatase J4G46_12690 PF01177 Asp/Glu/Hydantoin racemase J4G46_12725 PF01206 Sulfurtransferase TusA J4G46_12730 PF03471 Transporter associated domain J4G46_12730 PF00571 CBS domain J4G46_12735 PF00795 Carbon-nitrogen hydrolase J4G46_12740 PF08334 Type II secretion system (T2SS), protein G J4G46_12740 PF07963 Prokaryotic N-terminal methylation motif J4G46_12745 PF00482 Type II secretion system (T2SS), protein F J4G46_12750 PF17764 3′ DNA-binding domain (3′BD) J4G46_12750 PF00270 DEAD/DEAH box helicase J4G46_12750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4G46_12750 PF00271 Helicase conserved C-terminal domain J4G46_12750 PF18074 Primosomal protein N C-terminal domain J4G46_12755 PF00999 Sodium/hydrogen exchanger family J4G46_12755 PF02254 TrkA-N domain J4G46_12760 PF01430 Hsp33 protein J4G46_12790 PF00013 KH domain J4G46_12790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4G46_12790 PF01138 3' exoribonuclease family, domain 1 J4G46_12790 PF03725 3' exoribonuclease family, domain 2 J4G46_12790 PF00575 S1 RNA binding domain J4G46_12795 PF00312 Ribosomal protein S15 J4G46_12800 PF13538 UvrD-like helicase C-terminal domain J4G46_12805 PF00580 UvrD/REP helicase N-terminal domain J4G46_12805 PF12705 PD-(D/E)XK nuclease superfamily J4G46_12805 PF13361 UvrD-like helicase C-terminal domain J4G46_12810 PF17946 RecC C-terminal domain J4G46_12820 PF03976 Polyphosphate kinase 2 (PPK2) J4G46_12830 PF01209 ubiE/COQ5 methyltransferase family J4G46_12840 PF03109 ABC1 family J4G46_12850 PF01502 Phosphoribosyl-AMP cyclohydrolase J4G46_12865 PF13244 Domain of unknown function (DUF4040) J4G46_12865 PF00361 Proton-conducting membrane transporter J4G46_12865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4G46_12865 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4G46_12870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4G46_12875 PF00361 Proton-conducting membrane transporter J4G46_12880 PF01899 Na+/H+ ion antiporter subunit J4G46_12885 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4G46_12890 PF03334 Na+/H+ antiporter subunit J4G46_12895 PF02033 Ribosome-binding factor A J4G46_12900 PF00009 Elongation factor Tu GTP binding domain J4G46_12900 PF08364 Bacterial translation initiation factor IF-2 associated region J4G46_12900 PF04760 Translation initiation factor IF-2, N-terminal region J4G46_12900 PF11987 Translation-initiation factor 2 J4G46_12905 PF13184 NusA-like KH domain J4G46_12905 PF08529 NusA N-terminal domain J4G46_12905 PF00575 S1 RNA binding domain J4G46_12910 PF02576 RimP N-terminal domain J4G46_12910 PF17384 RimP C-terminal SH3 domain J4G46_12935 PF03840 Preprotein translocase SecG subunit J4G46_12940 PF00121 Triosephosphate isomerase J4G46_12945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4G46_12945 PF00437 Type II/IV secretion system protein J4G46_12950 PF00482 Type II secretion system (T2SS), protein F J4G46_12955 PF06750 Bacterial Peptidase A24 N-terminal domain J4G46_12955 PF01478 Type IV leader peptidase family J4G46_12960 PF01121 Dephospho-CoA kinase J4G46_12970 PF00588 SpoU rRNA Methylase family J4G46_12970 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4G46_12975 PF06865 Pyrimidine/purine nucleoside phosphorylase J4G46_12980 PF02463 RecF/RecN/SMC N terminal domain J4G46_12985 PF02622 Uncharacterized ACR, COG1678 J4G46_12990 PF03652 Holliday junction resolvase J4G46_13005 PF00664 ABC transporter transmembrane region J4G46_13005 PF00005 ABC transporter J4G46_13010 PF01066 CDP-alcohol phosphatidyltransferase J4G46_13020 PF01541 GIY-YIG catalytic domain J4G46_13020 PF02151 UvrB/uvrC motif J4G46_13020 PF08459 UvrC Helix-hairpin-helix N-terminal J4G46_13025 PF10431 C-terminal, D2-small domain, of ClpB protein J4G46_13025 PF07724 AAA domain (Cdc48 subfamily) J4G46_13040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4G46_13040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4G46_13040 PF00378 Enoyl-CoA hydratase/isomerase J4G46_13045 PF02803 Thiolase, C-terminal domain J4G46_13045 PF00108 Thiolase, N-terminal domain J4G46_13060 PF01323 DSBA-like thioredoxin domain J4G46_13090 PF00183 Hsp90 protein J4G46_13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_13105 PF13726 Na+-H+ antiporter family J4G46_13105 PF03553 Na+/H+ antiporter family J4G46_13110 PF00561 alpha/beta hydrolase fold J4G46_13135 PF00623 RNA polymerase Rpb1, domain 2 J4G46_13135 PF04983 RNA polymerase Rpb1, domain 3 J4G46_13135 PF05000 RNA polymerase Rpb1, domain 4 J4G46_13135 PF04998 RNA polymerase Rpb1, domain 5 J4G46_13135 PF04997 RNA polymerase Rpb1, domain 1 J4G46_13140 PF04563 RNA polymerase beta subunit J4G46_13140 PF04565 RNA polymerase Rpb2, domain 3 J4G46_13140 PF10385 RNA polymerase beta subunit external 1 domain J4G46_13140 PF00562 RNA polymerase Rpb2, domain 6 J4G46_13140 PF04560 RNA polymerase Rpb2, domain 7 J4G46_13140 PF04561 RNA polymerase Rpb2, domain 2 J4G46_13145 PF00542 Ribosomal protein L7/L12 C-terminal domain J4G46_13145 PF16320 Ribosomal protein L7/L12 dimerisation domain J4G46_13150 PF00466 Ribosomal protein L10 J4G46_13155 PF00687 Ribosomal protein L1p/L10e family J4G46_13160 PF00298 Ribosomal protein L11, RNA binding domain J4G46_13160 PF03946 Ribosomal protein L11, N-terminal domain J4G46_13165 PF00467 KOW motif J4G46_13165 PF02357 Transcription termination factor nusG J4G46_13170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4G46_13180 PF00009 Elongation factor Tu GTP binding domain J4G46_13180 PF03144 Elongation factor Tu domain 2 J4G46_13180 PF03143 Elongation factor Tu C-terminal domain J4G46_13205 PF04715 Anthranilate synthase component I, N terminal region J4G46_13205 PF00425 chorismate binding enzyme J4G46_13210 PF13419 Haloacid dehalogenase-like hydrolase J4G46_13215 PF16697 Inner membrane component of T3SS, cytoplasmic domain J4G46_13220 PF03958 Bacterial type II/III secretion system short domain J4G46_13220 PF00263 Bacterial type II and III secretion system protein J4G46_13235 PF00816 H-NS histone family J4G46_13240 PF03061 Thioesterase superfamily J4G46_13260 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4G46_13260 PF03900 Porphobilinogen deaminase, C-terminal domain J4G46_13265 PF04397 LytTr DNA-binding domain J4G46_13265 PF00072 Response regulator receiver domain J4G46_13270 PF07694 5TMR of 5TMR-LYT J4G46_13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_13270 PF06580 Histidine kinase J4G46_13275 PF14698 Argininosuccinate lyase C-terminal J4G46_13275 PF00206 Lyase J4G46_13280 PF04362 Bacterial Fe(2+) trafficking J4G46_13285 PF01895 PhoU domain J4G46_13290 PF02321 Outer membrane efflux protein J4G46_13300 PF13667 ThiC-associated domain J4G46_13300 PF01964 Radical SAM ThiC family J4G46_13305 PF00293 NUDIX domain J4G46_13310 PF00149 Calcineurin-like phosphoesterase J4G46_13315 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4G46_13320 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4G46_13330 PF01098 Cell cycle protein J4G46_13335 PF02875 Mur ligase family, glutamate ligase domain J4G46_13335 PF08245 Mur ligase middle domain J4G46_13345 PF07664 Ferrous iron transport protein B C terminus J4G46_13345 PF02421 Ferrous iron transport protein B J4G46_13345 PF07670 Nucleoside recognition J4G46_13355 PF00589 Phage integrase family J4G46_13355 PF02899 Phage integrase, N-terminal SAM-like domain J4G46_13360 PF10411 Disulfide bond isomerase protein N-terminus J4G46_13360 PF13098 Thioredoxin-like domain J4G46_13365 PF01842 ACT domain J4G46_13365 PF00742 Homoserine dehydrogenase J4G46_13365 PF03447 Homoserine dehydrogenase, NAD binding domain J4G46_13370 PF00291 Pyridoxal-phosphate dependent enzyme J4G46_13375 PF00768 D-alanyl-D-alanine carboxypeptidase J4G46_13380 PF00072 Response regulator receiver domain J4G46_13380 PF00196 Bacterial regulatory proteins, luxR family J4G46_13385 PF00512 His Kinase A (phospho-acceptor) domain J4G46_13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_13390 PF02954 Bacterial regulatory protein, Fis family J4G46_13390 PF00072 Response regulator receiver domain J4G46_13390 PF00158 Sigma-54 interaction domain J4G46_13395 PF01471 Putative peptidoglycan binding domain J4G46_13395 PF03572 Peptidase family S41 J4G46_13395 PF17820 PDZ domain J4G46_13400 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4G46_13400 PF01676 Metalloenzyme superfamily J4G46_13405 PF03739 Lipopolysaccharide export system permease LptF/LptG J4G46_13410 PF03739 Lipopolysaccharide export system permease LptF/LptG J4G46_13415 PF00883 Cytosol aminopeptidase family, catalytic domain J4G46_13415 PF02789 Cytosol aminopeptidase family, N-terminal domain J4G46_13435 PF09335 SNARE associated Golgi protein J4G46_13440 PF00677 Lumazine binding domain J4G46_13450 PF01872 RibD C-terminal domain J4G46_13450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4G46_13455 PF03477 ATP cone domain J4G46_13460 PF00909 Ammonium Transporter Family J4G46_13465 PF00543 Nitrogen regulatory protein P-II J4G46_13475 PF01078 Magnesium chelatase, subunit ChlI J4G46_13475 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4G46_13490 PF00719 Inorganic pyrophosphatase J4G46_13505 PF00501 AMP-binding enzyme J4G46_13505 PF13193 AMP-binding enzyme C-terminal domain J4G46_13510 PF03989 DNA gyrase C-terminal domain, beta-propeller J4G46_13510 PF00521 DNA gyrase/topoisomerase IV, subunit A J4G46_13515 PF07690 Major Facilitator Superfamily J4G46_13520 PF03458 UPF0126 domain J4G46_13525 PF02810 SEC-C motif J4G46_13530 PF00571 CBS domain J4G46_13530 PF03471 Transporter associated domain J4G46_13530 PF03741 Integral membrane protein TerC family J4G46_13535 PF03641 Possible lysine decarboxylase J4G46_13545 PF07690 Major Facilitator Superfamily J4G46_13550 PF01183 Glycosyl hydrolases family 25 J4G46_13560 PF00817 impB/mucB/samB family J4G46_13560 PF11799 impB/mucB/samB family C-terminal domain J4G46_13560 PF11798 IMS family HHH motif J4G46_13575 PF11842 Domain of unknown function (DUF3362) J4G46_13575 PF04055 Radical SAM superfamily J4G46_13575 PF08497 Radical SAM N-terminal J4G46_13580 PF07690 Major Facilitator Superfamily J4G46_13585 PF07690 Major Facilitator Superfamily J4G46_13625 PF01327 Polypeptide deformylase J4G46_13650 PF00394 Multicopper oxidase J4G46_13650 PF07731 Multicopper oxidase J4G46_13650 PF07732 Multicopper oxidase J4G46_13675 PF00873 AcrB/AcrD/AcrF family J4G46_13680 PF01545 Cation efflux family J4G46_13705 PF00005 ABC transporter J4G46_13705 PF12848 ABC transporter J4G46_13710 PF04221 RelB antitoxin J4G46_13730 PF00106 short chain dehydrogenase J4G46_13735 PF00005 ABC transporter J4G46_13735 PF12848 ABC transporter J4G46_13740 PF13610 DDE domain J4G46_13760 PF13610 DDE domain J4G46_13840 PF04221 RelB antitoxin J4G46_13855 PF02796 Helix-turn-helix domain of resolvase J4G46_13855 PF00239 Resolvase, N terminal domain J4G46_13860 PF01636 Phosphotransferase enzyme family J4G46_13865 PF00005 ABC transporter J4G46_13865 PF12848 ABC transporter J4G46_13870 PF00398 Ribosomal RNA adenine dimethylase J4G46_13890 PF00580 UvrD/REP helicase N-terminal domain J4G46_13890 PF13361 UvrD-like helicase C-terminal domain J4G46_13900 PF08463 EcoEI R protein C-terminal J4G46_13900 PF00271 Helicase conserved C-terminal domain J4G46_13900 PF04851 Type III restriction enzyme, res subunit J4G46_13900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4G46_13910 PF02384 N-6 DNA Methylase J4G46_13910 PF12161 HsdM N-terminal domain J4G46_13930 PF01381 Helix-turn-helix J4G46_13945 PF00665 Integrase core domain J4G46_13950 PF01695 IstB-like ATP binding protein J4G46_13970 PF00905 Penicillin binding protein transpeptidase domain J4G46_13980 PF00072 Response regulator receiver domain J4G46_13980 PF00486 Transcriptional regulatory protein, C terminal J4G46_13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4G46_13985 PF00989 PAS fold J4G46_13985 PF00512 His Kinase A (phospho-acceptor) domain J4G46_13985 PF18698 Histidine kinase sensor domain J4G46_13985 PF00672 HAMP domain J4G46_13990 PF07690 Major Facilitator Superfamily J4G46_13995 PF00873 AcrB/AcrD/AcrF family J4G46_14000 PF00529 HlyD membrane-fusion protein of T1SS J4G46_14000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4G46_14015 PF01381 Helix-turn-helix J4G46_14020 PF05973 Phage derived protein Gp49-like (DUF891) J4G46_14030 PF01740 STAS domain J4G46_14030 PF00916 Sulfate permease family J4G46_14035 PF01381 Helix-turn-helix J4G46_14040 PF05973 Phage derived protein Gp49-like (DUF891) J4G46_14055 PF02796 Helix-turn-helix domain of resolvase J4G46_14055 PF00239 Resolvase, N terminal domain J4G46_14065 PF07690 Major Facilitator Superfamily J4G46_14070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_14070 PF03466 LysR substrate binding domain J4G46_14080 PF00809 Pterin binding enzyme J4G46_14095 PF01636 Phosphotransferase enzyme family J4G46_14110 PF02796 Helix-turn-helix domain of resolvase J4G46_14110 PF00239 Resolvase, N terminal domain J4G46_14115 PF01494 FAD binding domain J4G46_14120 PF13495 Phage integrase, N-terminal SAM-like domain J4G46_14120 PF00589 Phage integrase family J4G46_14125 PF13610 DDE domain J4G46_14130 PF01636 Phosphotransferase enzyme family J4G46_14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4G46_14135 PF03466 LysR substrate binding domain J4G46_14140 PF13610 DDE domain J4G46_14155 PF04463 Protein of unknown function (DUF523) J4G46_14160 PF13427 Domain of unknown function (DUF4111) J4G46_14160 PF01909 Nucleotidyltransferase domain J4G46_14190 PF01545 Cation efflux family J4G46_14200 PF13411 MerR HTH family regulatory protein J4G46_14205 PF00589 Phage integrase family J4G46_14205 PF13356 Arm DNA-binding domain J4G46_14240 PF13018 Extended Signal Peptide of Type V secretion system J4G46_14240 PF05860 haemagglutination activity domain J4G46_14240 PF04829 Pre-toxin domain with VENN motif J4G46_14240 PF13332 Hemagglutinin repeat J4G46_14245 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J4G46_14245 PF08479 POTRA domain, ShlB-type J4G46_14245 PF17287 POTRA domain J4G46_14260 PF13173 AAA domain J4G46_14260 PF13635 Domain of unknown function (DUF4143) J4G46_14320 PF02810 SEC-C motif J4G46_14345 PF00873 AcrB/AcrD/AcrF family J4G46_14385 PF13614 AAA domain J4G46_14390 PF02195 ParB-like nuclease domain J4G46_14390 PF17762 HTH domain found in ParB protein J4G46_14400 PF02384 N-6 DNA Methylase J4G46_14420 PF18766 SWI2/SNF2 ATPase J4G46_14420 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4G46_14420 PF11867 Domain of unknown function (DUF3387) J4G46_14480 PF00717 Peptidase S24-like J4G46_14485 PF11799 impB/mucB/samB family C-terminal domain J4G46_14485 PF00817 impB/mucB/samB family J4G46_14485 PF13438 Domain of unknown function (DUF4113) J4G46_14485 PF11798 IMS family HHH motif J4G46_14495 PF13742 OB-fold nucleic acid binding domain J4G46_14495 PF02601 Exonuclease VII, large subunit