locus-tag class description LA331_00035 PF00324 Amino acid permease LA331_00045 PF00324 Amino acid permease LA331_00060 PF00929 Exonuclease LA331_00065 PF01979 Amidohydrolase family LA331_00070 PF00990 Diguanylate cyclase, GGDEF domain LA331_00070 PF08448 PAS fold LA331_00075 PF00764 Arginosuccinate synthase LA331_00085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA331_00085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_00105 PF00245 Alkaline phosphatase LA331_00110 PF00245 Alkaline phosphatase LA331_00120 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LA331_00120 PF12833 Helix-turn-helix domain LA331_00125 PF00072 Response regulator receiver domain LA331_00125 PF00990 Diguanylate cyclase, GGDEF domain LA331_00135 PF02333 Phytase LA331_00140 PF01618 MotA/TolQ/ExbB proton channel family LA331_00145 PF02472 Biopolymer transport protein ExbD/TolR LA331_00155 PF00390 Malic enzyme, N-terminal domain LA331_00155 PF03949 Malic enzyme, NAD binding domain LA331_00160 PF00313 'Cold-shock' DNA-binding domain LA331_00185 PF05175 Methyltransferase small domain LA331_00190 PF02678 Pirin LA331_00190 PF17954 Quercetinase C-terminal cupin domain LA331_00200 PF01208 Uroporphyrinogen decarboxylase (URO-D) LA331_00205 PF05675 Protein of unknown function (DUF817) LA331_00220 PF00990 Diguanylate cyclase, GGDEF domain LA331_00235 PF01227 GTP cyclohydrolase I LA331_00250 PF00218 Indole-3-glycerol phosphate synthase LA331_00255 PF00591 Glycosyl transferase family, a/b domain LA331_00255 PF02885 Glycosyl transferase family, helical bundle domain LA331_00260 PF00117 Glutamine amidotransferase class-I LA331_00270 PF03951 Glutamine synthetase, beta-Grasp domain LA331_00270 PF00120 Glutamine synthetase, catalytic domain LA331_00280 PF04345 Chorismate lyase LA331_00285 PF01040 UbiA prenyltransferase family LA331_00330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA331_00330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA331_00335 PF01784 NIF3 (NGG1p interacting factor 3) LA331_00340 PF13180 PDZ domain LA331_00350 PF12697 Alpha/beta hydrolase family LA331_00355 PF00296 Luciferase-like monooxygenase LA331_00360 PF00857 Isochorismatase family LA331_00365 PF01042 Endoribonuclease L-PSP LA331_00370 PF01613 Flavin reductase like domain LA331_00375 PF00860 Permease family LA331_00380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA331_00380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LA331_00390 PF09317 Domain of unknown function (DUF1974) LA331_00390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_00390 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_00390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_00395 PF04055 Radical SAM superfamily LA331_00400 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_00400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA331_00410 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LA331_00410 PF08666 SAF domain LA331_00415 PF03812 2-keto-3-deoxygluconate permease LA331_00450 PF13613 Helix-turn-helix of DDE superfamily endonuclease LA331_00450 PF13359 DDE superfamily endonuclease LA331_00460 PF02151 UvrB/uvrC motif LA331_00460 PF12344 Ultra-violet resistance protein B LA331_00460 PF17757 UvrB interaction domain LA331_00460 PF00271 Helicase conserved C-terminal domain LA331_00460 PF04851 Type III restriction enzyme, res subunit LA331_00465 PF08212 Lipocalin-like domain LA331_00470 PF00892 EamA-like transporter family LA331_00475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA331_00475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA331_00480 PF01638 HxlR-like helix-turn-helix LA331_00490 PF01926 50S ribosome-binding GTPase LA331_00490 PF01018 GTP1/OBG LA331_00495 PF01472 PUA domain LA331_00495 PF00696 Amino acid kinase family LA331_00500 PF01569 PAP2 superfamily LA331_00510 PF00202 Aminotransferase class-III LA331_00515 PF00282 Pyridoxal-dependent decarboxylase conserved domain LA331_00520 PF00355 Rieske [2Fe-2S] domain LA331_00530 PF01037 Lrp/AsnC ligand binding domain LA331_00535 PF00205 Thiamine pyrophosphate enzyme, central domain LA331_00535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA331_00535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA331_00540 PF00324 Amino acid permease LA331_00545 PF12849 PBP superfamily domain LA331_00550 PF00528 Binding-protein-dependent transport system inner membrane component LA331_00555 PF00528 Binding-protein-dependent transport system inner membrane component LA331_00560 PF00005 ABC transporter LA331_00570 PF08496 Peptidase family S49 N-terminal LA331_00570 PF01343 Peptidase family S49 LA331_00590 PF08328 Adenylosuccinate lyase C-terminal LA331_00590 PF00206 Lyase LA331_00595 PF04356 Protein of unknown function (DUF489) LA331_00605 PF00293 NUDIX domain LA331_00610 PF01757 Acyltransferase family LA331_00625 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_00630 PF00768 D-alanyl-D-alanine carboxypeptidase LA331_00630 PF07943 Penicillin-binding protein 5, C-terminal domain LA331_00645 PF01975 Survival protein SurE LA331_00650 PF01476 LysM domain LA331_00650 PF01551 Peptidase family M23 LA331_00655 PF03466 LysR substrate binding domain LA331_00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_00660 PF00202 Aminotransferase class-III LA331_00665 PF00462 Glutaredoxin LA331_00670 PF13654 AAA domain LA331_00670 PF05362 Lon protease (S16) C-terminal proteolytic domain LA331_00675 PF07690 Major Facilitator Superfamily LA331_00680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA331_00685 PF13593 SBF-like CPA transporter family (DUF4137) LA331_00690 PF01197 Ribosomal protein L31 LA331_00705 PF04055 Radical SAM superfamily LA331_00710 PF01132 Elongation factor P (EF-P) OB domain LA331_00710 PF08207 Elongation factor P (EF-P) KOW-like domain LA331_00710 PF09285 Elongation factor P, C-terminal LA331_00715 PF02554 Carbon starvation protein CstA LA331_00715 PF13722 5TM C-terminal transporter carbon starvation CstA LA331_00720 PF04328 Selenoprotein, putative LA331_00725 PF07726 ATPase family associated with various cellular activities (AAA) LA331_00725 PF17863 AAA lid domain LA331_00735 PF13559 Domain of unknown function (DUF4129) LA331_00735 PF01841 Transglutaminase-like superfamily LA331_00735 PF11992 Domain of unknown function (DUF3488) LA331_00750 PF03971 Monomeric isocitrate dehydrogenase LA331_00755 PF00149 Calcineurin-like phosphoesterase LA331_00760 PF02566 OsmC-like protein LA331_00765 PF00027 Cyclic nucleotide-binding domain LA331_00765 PF13545 Crp-like helix-turn-helix domain LA331_00770 PF00248 Aldo/keto reductase family LA331_00780 PF00004 ATPase family associated with various cellular activities (AAA) LA331_00780 PF17871 AAA lid domain LA331_00780 PF02861 Clp amino terminal domain, pathogenicity island component LA331_00780 PF10431 C-terminal, D2-small domain, of ClpB protein LA331_00780 PF07724 AAA domain (Cdc48 subfamily) LA331_00785 PF10672 S-adenosylmethionine-dependent methyltransferase LA331_00785 PF02926 THUMP domain LA331_00785 PF01170 Putative RNA methylase family UPF0020 LA331_00795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA331_00795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA331_00800 PF01979 Amidohydrolase family LA331_00805 PF00691 OmpA family LA331_00805 PF01389 OmpA-like transmembrane domain LA331_00810 PF02667 Short chain fatty acid transporter LA331_00815 PF01144 Coenzyme A transferase LA331_00820 PF01144 Coenzyme A transferase LA331_00825 PF00682 HMGL-like LA331_00830 PF02785 Biotin carboxylase C-terminal domain LA331_00830 PF00289 Biotin carboxylase, N-terminal domain LA331_00830 PF00364 Biotin-requiring enzyme LA331_00830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA331_00830 PF18140 Propionyl-coenzyme A carboxylase BT domain LA331_00835 PF00378 Enoyl-CoA hydratase/isomerase LA331_00840 PF01039 Carboxyl transferase domain LA331_00845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_00845 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_00845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_00850 PF00440 Bacterial regulatory proteins, tetR family LA331_00850 PF17925 Tetracyclin repressor-like, C-terminal domain LA331_00855 PF13193 AMP-binding enzyme C-terminal domain LA331_00855 PF00501 AMP-binding enzyme LA331_00875 PF02390 Putative methyltransferase LA331_00880 PF01740 STAS domain LA331_00880 PF00916 Sulfate permease family LA331_00885 PF02798 Glutathione S-transferase, N-terminal domain LA331_00885 PF14497 Glutathione S-transferase, C-terminal domain LA331_00890 PF02525 Flavodoxin-like fold LA331_00905 PF05690 Thiazole biosynthesis protein ThiG LA331_00915 PF04241 Protein of unknown function (DUF423) LA331_00920 PF00140 Sigma-70 factor, region 1.2 LA331_00920 PF04542 Sigma-70 region 2 LA331_00920 PF04545 Sigma-70, region 4 LA331_00930 PF00313 'Cold-shock' DNA-binding domain LA331_00935 PF00270 DEAD/DEAH box helicase LA331_00935 PF00271 Helicase conserved C-terminal domain LA331_00945 PF00881 Nitroreductase family LA331_00950 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LA331_00950 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LA331_00970 PF01180 Dihydroorotate dehydrogenase LA331_00980 PF00156 Phosphoribosyl transferase domain LA331_00995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA331_00995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA331_01000 PF01435 Peptidase family M48 LA331_01010 PF09424 Yqey-like protein LA331_01015 PF01165 Ribosomal protein S21 LA331_01020 PF00814 Glycoprotease family LA331_01025 PF13185 GAF domain LA331_01025 PF00990 Diguanylate cyclase, GGDEF domain LA331_01045 PF08308 PEGA domain LA331_01045 PF00069 Protein kinase domain LA331_01095 PF00753 Metallo-beta-lactamase superfamily LA331_01095 PF16123 Hydroxyacylglutathione hydrolase C-terminus LA331_01105 PF02567 Phenazine biosynthesis-like protein LA331_01110 PF00675 Insulinase (Peptidase family M16) LA331_01110 PF05193 Peptidase M16 inactive domain LA331_01130 PF01928 CYTH domain LA331_01145 PF02581 Thiamine monophosphate synthase LA331_01150 PF00202 Aminotransferase class-III LA331_01155 PF03928 Haem-degrading LA331_01175 PF00849 RNA pseudouridylate synthase LA331_01180 PF12137 RNA polymerase recycling family C-terminal LA331_01180 PF00176 SNF2 family N-terminal domain LA331_01180 PF18339 RapA N-terminal Tudor like domain 1 LA331_01180 PF18337 RapA N-terminal Tudor like domain LA331_01180 PF00271 Helicase conserved C-terminal domain LA331_01190 PF00561 alpha/beta hydrolase fold LA331_01190 PF08386 TAP-like protein LA331_01195 PF00440 Bacterial regulatory proteins, tetR family LA331_01200 PF00175 Oxidoreductase NAD-binding domain LA331_01200 PF00111 2Fe-2S iron-sulfur cluster binding domain LA331_01200 PF00970 Oxidoreductase FAD-binding domain LA331_01205 PF00487 Fatty acid desaturase LA331_01215 PF07759 Protein of unknown function (DUF1615) LA331_01220 PF01207 Dihydrouridine synthase (Dus) LA331_01230 PF03060 Nitronate monooxygenase LA331_01250 PF04143 Sulphur transport LA331_01260 PF02773 S-adenosylmethionine synthetase, C-terminal domain LA331_01260 PF02772 S-adenosylmethionine synthetase, central domain LA331_01260 PF00438 S-adenosylmethionine synthetase, N-terminal domain LA331_01265 PF07963 Prokaryotic N-terminal methylation motif LA331_01265 PF00114 Pilin (bacterial filament) LA331_01270 PF02779 Transketolase, pyrimidine binding domain LA331_01270 PF00456 Transketolase, thiamine diphosphate binding domain LA331_01270 PF02780 Transketolase, C-terminal domain LA331_01285 PF04264 YceI-like domain LA331_01290 PF00117 Glutamine amidotransferase class-I LA331_01290 PF00958 GMP synthase C terminal domain LA331_01290 PF02540 NAD synthase LA331_01295 PF14834 Glutathione S-transferase, C-terminal domain LA331_01295 PF02798 Glutathione S-transferase, N-terminal domain LA331_01300 PF01545 Cation efflux family LA331_01330 PF09190 DALR domain LA331_01330 PF01406 tRNA synthetases class I (C) catalytic domain LA331_01340 PF01380 SIS domain LA331_01340 PF00571 CBS domain LA331_01355 PF03968 OstA-like protein LA331_01360 PF12399 Branched-chain amino acid ATP-binding cassette transporter LA331_01360 PF00005 ABC transporter LA331_01375 PF13533 Biotin-lipoyl like LA331_01380 PF01205 Uncharacterized protein family UPF0029 LA331_01395 PF01596 O-methyltransferase LA331_01405 PF00037 4Fe-4S binding domain LA331_01405 PF11953 Domain of unknown function (DUF3470) LA331_01410 PF05188 MutS domain II LA331_01410 PF05192 MutS domain III LA331_01410 PF05190 MutS family domain IV LA331_01410 PF00488 MutS domain V LA331_01410 PF01624 MutS domain I LA331_01425 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_01430 PF00588 SpoU rRNA Methylase family LA331_01435 PF02811 PHP domain LA331_01435 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA331_01435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA331_01435 PF14579 Helix-hairpin-helix motif LA331_01435 PF01336 OB-fold nucleic acid binding domain LA331_01440 PF00528 Binding-protein-dependent transport system inner membrane component LA331_01445 PF00005 ABC transporter LA331_01445 PF09383 NIL domain LA331_01450 PF03180 NLPA lipoprotein LA331_01460 PF02843 Phosphoribosylglycinamide synthetase, C domain LA331_01460 PF02844 Phosphoribosylglycinamide synthetase, N domain LA331_01460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LA331_01465 PF01808 AICARFT/IMPCHase bienzyme LA331_01465 PF02142 MGS-like domain LA331_01470 PF02954 Bacterial regulatory protein, Fis family LA331_01500 PF13932 GidA associated domain LA331_01500 PF01134 Glucose inhibited division protein A LA331_01510 PF02954 Bacterial regulatory protein, Fis family LA331_01510 PF00072 Response regulator receiver domain LA331_01510 PF00158 Sigma-54 interaction domain LA331_01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_01515 PF00512 His Kinase A (phospho-acceptor) domain LA331_01515 PF00989 PAS fold LA331_01520 PF04055 Radical SAM superfamily LA331_01520 PF18693 TRAM domain LA331_01520 PF00919 Uncharacterized protein family UPF0004 LA331_01525 PF00696 Amino acid kinase family LA331_01530 PF01765 Ribosome recycling factor LA331_01535 PF01255 Putative undecaprenyl diphosphate synthase LA331_01545 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LA331_01545 PF13288 DXP reductoisomerase C-terminal domain LA331_01545 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LA331_01550 PF17820 PDZ domain LA331_01550 PF13180 PDZ domain LA331_01550 PF02163 Peptidase family M50 LA331_01555 PF01103 Surface antigen LA331_01555 PF07244 Surface antigen variable number repeat LA331_01565 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_01565 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LA331_01570 PF07977 FabA-like domain LA331_01575 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LA331_01575 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_01590 PF02631 RecX family LA331_01595 PF00154 recA bacterial DNA recombination protein LA331_01600 PF01479 S4 domain LA331_01605 PF13419 Haloacid dehalogenase-like hydrolase LA331_01610 PF00459 Inositol monophosphatase family LA331_01625 PF01649 Ribosomal protein S20 LA331_01630 PF13460 NAD(P)H-binding LA331_01635 PF03737 Aldolase/RraA LA331_01645 PF00072 Response regulator receiver domain LA331_01645 PF00196 Bacterial regulatory proteins, luxR family LA331_01650 PF00672 HAMP domain LA331_01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_01650 PF07730 Histidine kinase LA331_01655 PF08007 Cupin superfamily protein LA331_01660 PF02545 Maf-like protein LA331_01670 PF00162 Phosphoglycerate kinase LA331_01680 PF01116 Fructose-bisphosphate aldolase class-II LA331_01695 PF00881 Nitroreductase family LA331_01710 PF00149 Calcineurin-like phosphoesterase LA331_01715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA331_01720 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LA331_01720 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA331_01725 PF01062 Bestrophin, RFP-TM, chloride channel LA331_01740 PF05958 tRNA (Uracil-5-)-methyltransferase LA331_01745 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LA331_01745 PF14850 DNA-binding domain of Proline dehydrogenase LA331_01745 PF01619 Proline dehydrogenase LA331_01745 PF00171 Aldehyde dehydrogenase family LA331_01750 PF01037 Lrp/AsnC ligand binding domain LA331_01755 PF00474 Sodium:solute symporter family LA331_01760 PF10415 Fumarase C C-terminus LA331_01760 PF00206 Lyase LA331_01770 PF02559 CarD-like/TRCF domain LA331_01770 PF00270 DEAD/DEAH box helicase LA331_01770 PF17757 UvrB interaction domain LA331_01770 PF03461 TRCF domain LA331_01770 PF00271 Helicase conserved C-terminal domain LA331_01780 PF00211 Adenylate and Guanylate cyclase catalytic domain LA331_01785 PF00111 2Fe-2S iron-sulfur cluster binding domain LA331_01790 PF00012 Hsp70 protein LA331_01795 PF00226 DnaJ domain LA331_01795 PF07743 HSCB C-terminal oligomerisation domain LA331_01800 PF01521 Iron-sulphur cluster biosynthesis LA331_01805 PF01592 NifU-like N terminal domain LA331_01810 PF00266 Aminotransferase class-V LA331_01815 PF02082 Transcriptional regulator LA331_01830 PF00216 Bacterial DNA-binding protein LA331_01855 PF07290 Protein of unknown function (DUF1449) LA331_01865 PF00294 pfkB family carbohydrate kinase LA331_01875 PF05193 Peptidase M16 inactive domain LA331_01875 PF00675 Insulinase (Peptidase family M16) LA331_01875 PF08367 Peptidase M16C associated LA331_01880 PF02253 Phospholipase A1 LA331_01885 PF02386 Cation transport protein LA331_01890 PF02080 TrkA-C domain LA331_01890 PF02254 TrkA-N domain LA331_01895 PF00291 Pyridoxal-phosphate dependent enzyme LA331_01895 PF00585 C-terminal regulatory domain of Threonine dehydratase LA331_01900 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LA331_01910 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA331_01910 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA331_01920 PF02617 ATP-dependent Clp protease adaptor protein ClpS LA331_01925 PF10431 C-terminal, D2-small domain, of ClpB protein LA331_01925 PF02861 Clp amino terminal domain, pathogenicity island component LA331_01925 PF17871 AAA lid domain LA331_01925 PF07724 AAA domain (Cdc48 subfamily) LA331_01925 PF00004 ATPase family associated with various cellular activities (AAA) LA331_01930 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LA331_01940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA331_01940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA331_01945 PF00440 Bacterial regulatory proteins, tetR family LA331_01955 PF00285 Citrate synthase, C-terminal domain LA331_01985 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system LA331_01990 PF01381 Helix-turn-helix LA331_02000 PF13438 Domain of unknown function (DUF4113) LA331_02000 PF00817 impB/mucB/samB family LA331_02000 PF11799 impB/mucB/samB family C-terminal domain LA331_02000 PF11798 IMS family HHH motif LA331_02005 PF00717 Peptidase S24-like LA331_02040 PF03050 Transposase IS66 family LA331_02040 PF13817 IS66 C-terminal element LA331_02040 PF13007 Transposase C of IS166 homeodomain LA331_02040 PF13005 zinc-finger binding domain of transposase IS66 LA331_02045 PF12832 MFS_1 like family LA331_02050 PF01425 Amidase LA331_02055 PF17151 Periplasmic sensor domain LA331_02055 PF00990 Diguanylate cyclase, GGDEF domain LA331_02065 PF00289 Biotin carboxylase, N-terminal domain LA331_02065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA331_02065 PF02785 Biotin carboxylase C-terminal domain LA331_02070 PF00364 Biotin-requiring enzyme LA331_02075 PF01220 Dehydroquinase class II LA331_02080 PF04073 Aminoacyl-tRNA editing domain LA331_02110 PF02635 DsrE/DsrF-like family LA331_02115 PF00589 Phage integrase family LA331_02150 PF03837 RecT family LA331_02175 PF00717 Peptidase S24-like LA331_02200 PF00772 DnaB-like helicase N terminal domain LA331_02200 PF03796 DnaB-like helicase C terminal domain LA331_02230 PF05866 Endodeoxyribonuclease RusA LA331_02275 PF03592 Terminase small subunit LA331_02280 PF04466 Phage terminase large subunit LA331_02280 PF17288 Terminase RNAseH like domain LA331_02375 PF16363 GDP-mannose 4,6 dehydratase LA331_02380 PF10415 Fumarase C C-terminus LA331_02380 PF00206 Lyase LA331_02415 PF12697 Alpha/beta hydrolase family LA331_02425 PF02653 Branched-chain amino acid transport system / permease component LA331_02435 PF00005 ABC transporter LA331_02435 PF12399 Branched-chain amino acid ATP-binding cassette transporter LA331_02440 PF00005 ABC transporter LA331_02450 PF05194 UreE urease accessory protein, C-terminal domain LA331_02450 PF02814 UreE urease accessory protein, N-terminal domain LA331_02455 PF01730 UreF LA331_02460 PF02492 CobW/HypB/UreG, nucleotide-binding domain LA331_02470 PF01774 UreD urease accessory protein LA331_02475 PF00547 Urease, gamma subunit LA331_02480 PF00699 Urease beta subunit LA331_02485 PF01979 Amidohydrolase family LA331_02485 PF00449 Urease alpha-subunit, N-terminal domain LA331_02505 PF00576 HIUase/Transthyretin family LA331_02510 PF00860 Permease family LA331_02520 PF04115 Ureidoglycolate lyase LA331_02525 PF03561 Allantoicase repeat LA331_02530 PF01494 FAD binding domain LA331_02540 PF03466 LysR substrate binding domain LA331_02540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_02545 PF00355 Rieske [2Fe-2S] domain LA331_02555 PF13936 Helix-turn-helix domain LA331_02555 PF00665 Integrase core domain LA331_02560 PF02608 ABC transporter substrate-binding protein PnrA-like LA331_02565 PF00005 ABC transporter LA331_02575 PF02653 Branched-chain amino acid transport system / permease component LA331_02580 PF01979 Amidohydrolase family LA331_02590 PF04966 Carbohydrate-selective porin, OprB family LA331_02595 PF01011 PQQ enzyme repeat LA331_02600 PF07715 TonB-dependent Receptor Plug Domain LA331_02600 PF00593 TonB dependent receptor LA331_02620 PF13533 Biotin-lipoyl like LA331_02630 PF04632 Fusaric acid resistance protein family LA331_02640 PF03466 LysR substrate binding domain LA331_02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_02675 PF05275 Copper resistance protein B precursor (CopB) LA331_02680 PF07731 Multicopper oxidase LA331_02680 PF00394 Multicopper oxidase LA331_02680 PF07732 Multicopper oxidase LA331_02690 PF00753 Metallo-beta-lactamase superfamily LA331_02700 PF04143 Sulphur transport LA331_02730 PF00501 AMP-binding enzyme LA331_02730 PF13193 AMP-binding enzyme C-terminal domain LA331_02740 PF00743 Flavin-binding monooxygenase-like LA331_02745 PF00561 alpha/beta hydrolase fold LA331_02750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_02750 PF12806 Acetyl-CoA dehydrogenase C-terminal like LA331_02750 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_02750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_02755 PF03060 Nitronate monooxygenase LA331_02760 PF00378 Enoyl-CoA hydratase/isomerase LA331_02765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA331_02770 PF00596 Class II Aldolase and Adducin N-terminal domain LA331_02780 PF02803 Thiolase, C-terminal domain LA331_02780 PF00108 Thiolase, N-terminal domain LA331_02785 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LA331_02785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA331_02785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA331_02790 PF00378 Enoyl-CoA hydratase/isomerase LA331_02795 PF07690 Major Facilitator Superfamily LA331_02805 PF07690 Major Facilitator Superfamily LA331_02810 PF01144 Coenzyme A transferase LA331_02815 PF01144 Coenzyme A transferase LA331_02820 PF07690 Major Facilitator Superfamily LA331_02825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_02825 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_02825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_02830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_02830 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_02835 PF09339 IclR helix-turn-helix domain LA331_02840 PF18381 YcaO cyclodehydratase C-terminal domain LA331_02840 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LA331_02850 PF00732 GMC oxidoreductase LA331_02850 PF05199 GMC oxidoreductase LA331_02855 PF00171 Aldehyde dehydrogenase family LA331_02860 PF13977 BetI-type transcriptional repressor, C-terminal LA331_02860 PF00440 Bacterial regulatory proteins, tetR family LA331_02865 PF02028 BCCT, betaine/carnitine/choline family transporter LA331_02890 PF00005 ABC transporter LA331_02895 PF13419 Haloacid dehalogenase-like hydrolase LA331_02900 PF00528 Binding-protein-dependent transport system inner membrane component LA331_02905 PF00005 ABC transporter LA331_02920 PF00893 Small Multidrug Resistance protein LA331_02925 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA331_02930 PF01425 Amidase LA331_02935 PF01402 Ribbon-helix-helix protein, copG family LA331_02935 PF08753 NikR C terminal nickel binding domain LA331_02940 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LA331_02955 PF13737 Transposase DDE domain LA331_02965 PF02785 Biotin carboxylase C-terminal domain LA331_02965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA331_02965 PF00289 Biotin carboxylase, N-terminal domain LA331_02980 PF13419 Haloacid dehalogenase-like hydrolase LA331_02990 PF00487 Fatty acid desaturase LA331_03000 PF13193 AMP-binding enzyme C-terminal domain LA331_03000 PF00501 AMP-binding enzyme LA331_03010 PF00155 Aminotransferase class I and II LA331_03010 PF00392 Bacterial regulatory proteins, gntR family LA331_03020 PF07690 Major Facilitator Superfamily LA331_03025 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_03030 PF03466 LysR substrate binding domain LA331_03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_03035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LA331_03035 PF13378 Enolase C-terminal domain-like LA331_03040 PF02426 Muconolactone delta-isomerase LA331_03045 PF04444 Catechol dioxygenase N terminus LA331_03045 PF00775 Dioxygenase LA331_03050 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LA331_03050 PF00355 Rieske [2Fe-2S] domain LA331_03055 PF00866 Ring hydroxylating beta subunit LA331_03060 PF00111 2Fe-2S iron-sulfur cluster binding domain LA331_03060 PF00175 Oxidoreductase NAD-binding domain LA331_03060 PF00970 Oxidoreductase FAD-binding domain LA331_03065 PF00106 short chain dehydrogenase LA331_03070 PF03594 Benzoate membrane transport protein LA331_03075 PF01144 Coenzyme A transferase LA331_03080 PF01144 Coenzyme A transferase LA331_03085 PF00108 Thiolase, N-terminal domain LA331_03085 PF02803 Thiolase, C-terminal domain LA331_03090 PF12146 Serine aminopeptidase, S33 LA331_03100 PF15887 Putative zinc-binding metallo-peptidase LA331_03100 PF10005 zinc-ribbon domain LA331_03115 PF13333 Integrase core domain LA331_03115 PF00665 Integrase core domain LA331_03115 PF13276 HTH-like domain LA331_03120 PF00108 Thiolase, N-terminal domain LA331_03120 PF02803 Thiolase, C-terminal domain LA331_03125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_03125 PF12806 Acetyl-CoA dehydrogenase C-terminal like LA331_03125 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_03125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_03130 PF00440 Bacterial regulatory proteins, tetR family LA331_03130 PF08360 QacR-like protein, C-terminal region LA331_03140 PF00376 MerR family regulatory protein LA331_03140 PF09278 MerR, DNA binding LA331_03145 PF00403 Heavy-metal-associated domain LA331_03150 PF00291 Pyridoxal-phosphate dependent enzyme LA331_03160 PF01740 STAS domain LA331_03160 PF00916 Sulfate permease family LA331_03165 PF00375 Sodium:dicarboxylate symporter family LA331_03175 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LA331_03185 PF00924 Mechanosensitive ion channel LA331_03190 PF00664 ABC transporter transmembrane region LA331_03190 PF00005 ABC transporter LA331_03195 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LA331_03195 PF12833 Helix-turn-helix domain LA331_03200 PF01597 Glycine cleavage H-protein LA331_03205 PF07690 Major Facilitator Superfamily LA331_03210 PF00437 Type II/IV secretion system protein LA331_03215 PF00437 Type II/IV secretion system protein LA331_03220 PF00793 DAHP synthetase I family LA331_03235 PF13091 PLD-like domain LA331_03265 PF00106 short chain dehydrogenase LA331_03280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_03280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_03280 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_03290 PF00565 Staphylococcal nuclease homologue LA331_03300 PF02322 Cytochrome bd terminal oxidase subunit II LA331_03305 PF01654 Cytochrome bd terminal oxidase subunit I LA331_03320 PF01381 Helix-turn-helix LA331_03330 PF02311 AraC-like ligand binding domain LA331_03330 PF12833 Helix-turn-helix domain LA331_03335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_03335 PF12806 Acetyl-CoA dehydrogenase C-terminal like LA331_03335 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_03335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_03340 PF00487 Fatty acid desaturase LA331_03345 PF12852 Cupin LA331_03345 PF12833 Helix-turn-helix domain LA331_03350 PF02684 Lipid-A-disaccharide synthetase LA331_03355 PF01925 Sulfite exporter TauE/SafE LA331_03360 PF00793 DAHP synthetase I family LA331_03370 PF02542 YgbB family LA331_03385 PF01266 FAD dependent oxidoreductase LA331_03405 PF01264 Chorismate synthase LA331_03410 PF05175 Methyltransferase small domain LA331_03425 PF03109 ABC1 family LA331_03430 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_03430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_03430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_03435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_03435 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_03435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_03440 PF00583 Acetyltransferase (GNAT) family LA331_03485 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LA331_03500 PF00448 SRP54-type protein, GTPase domain LA331_03500 PF02881 SRP54-type protein, helical bundle domain LA331_03505 PF05193 Peptidase M16 inactive domain LA331_03505 PF00675 Insulinase (Peptidase family M16) LA331_03535 PF00571 CBS domain LA331_03535 PF00478 IMP dehydrogenase / GMP reductase domain LA331_03540 PF00291 Pyridoxal-phosphate dependent enzyme LA331_03550 PF00004 ATPase family associated with various cellular activities (AAA) LA331_03550 PF17862 AAA+ lid domain LA331_03550 PF01434 Peptidase family M41 LA331_03560 PF05166 YcgL domain LA331_03565 PF01612 3'-5' exonuclease LA331_03565 PF00570 HRDC domain LA331_03570 PF02132 RecR protein LA331_03570 PF13662 Toprim domain LA331_03575 PF02575 YbaB/EbfC DNA-binding family LA331_03580 PF01053 Cys/Met metabolism PLP-dependent enzyme LA331_03590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LA331_03590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA331_03600 PF01230 HIT domain LA331_03605 PF00267 Gram-negative porin LA331_03615 PF01654 Cytochrome bd terminal oxidase subunit I LA331_03620 PF02322 Cytochrome bd terminal oxidase subunit II LA331_03625 PF08173 Membrane bound YbgT-like protein LA331_03640 PF01098 Cell cycle protein LA331_03645 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LA331_03650 PF04977 Septum formation initiator LA331_03655 PF00113 Enolase, C-terminal TIM barrel domain LA331_03655 PF03952 Enolase, N-terminal domain LA331_03660 PF00793 DAHP synthetase I family LA331_03665 PF00117 Glutamine amidotransferase class-I LA331_03665 PF06418 CTP synthase N-terminus LA331_03685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA331_03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_03700 PF02146 Sir2 family LA331_03705 PF03466 LysR substrate binding domain LA331_03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_03710 PF00557 Metallopeptidase family M24 LA331_03715 PF05525 Branched-chain amino acid transport protein LA331_03735 PF03616 Sodium/glutamate symporter LA331_03750 PF00330 Aconitase family (aconitate hydratase) LA331_03750 PF11791 Aconitate B N-terminal domain LA331_03750 PF06434 Aconitate hydratase 2 N-terminus LA331_03770 PF02601 Exonuclease VII, large subunit LA331_03770 PF13742 OB-fold nucleic acid binding domain LA331_03785 PF01103 Surface antigen LA331_03785 PF07244 Surface antigen variable number repeat LA331_03785 PF17243 POTRA domain TamA domain 1 LA331_03790 PF07690 Major Facilitator Superfamily LA331_03795 PF03232 Ubiquinone biosynthesis protein COQ7 LA331_03800 PF13737 Transposase DDE domain LA331_03810 PF02152 Dihydroneopterin aldolase LA331_03815 PF03109 ABC1 family LA331_03820 PF00899 ThiF family LA331_03835 PF00501 AMP-binding enzyme LA331_03835 PF13193 AMP-binding enzyme C-terminal domain LA331_03845 PF00106 short chain dehydrogenase LA331_03860 PF09084 NMT1/THI5 like LA331_03865 PF00528 Binding-protein-dependent transport system inner membrane component LA331_03870 PF17827 PrmC N-terminal domain LA331_03870 PF13847 Methyltransferase domain LA331_03875 PF03462 PCRF domain LA331_03875 PF00472 RF-1 domain LA331_03890 PF00296 Luciferase-like monooxygenase LA331_03895 PF00743 Flavin-binding monooxygenase-like LA331_03900 PF03618 Kinase/pyrophosphorylase LA331_03905 PF00391 PEP-utilising enzyme, mobile domain LA331_03905 PF02896 PEP-utilising enzyme, TIM barrel domain LA331_03905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LA331_03915 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LA331_03915 PF06481 COX Aromatic Rich Motif LA331_03920 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA331_03925 PF00510 Cytochrome c oxidase subunit III LA331_03930 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LA331_03935 PF01040 UbiA prenyltransferase family LA331_03940 PF01250 Ribosomal protein S6 LA331_03945 PF01084 Ribosomal protein S18 LA331_03950 PF03948 Ribosomal protein L9, C-terminal domain LA331_03950 PF01281 Ribosomal protein L9, N-terminal domain LA331_03955 PF00772 DnaB-like helicase N terminal domain LA331_03955 PF03796 DnaB-like helicase C terminal domain LA331_03960 PF00842 Alanine racemase, C-terminal domain LA331_03960 PF01168 Alanine racemase, N-terminal domain LA331_03975 PF01841 Transglutaminase-like superfamily LA331_03975 PF08379 Bacterial transglutaminase-like N-terminal region LA331_03985 PF14403 Circularly permuted ATP-grasp type 2 LA331_03995 PF01645 Conserved region in glutamate synthase LA331_04010 PF01565 FAD binding domain LA331_04010 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LA331_04015 PF01451 Low molecular weight phosphotyrosine protein phosphatase LA331_04020 PF00465 Iron-containing alcohol dehydrogenase LA331_04025 PF03061 Thioesterase superfamily LA331_04030 PF12169 DNA polymerase III subunits gamma and tau domain III LA331_04030 PF12170 DNA polymerase III tau subunit V interacting with alpha LA331_04030 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LA331_04055 PF02803 Thiolase, C-terminal domain LA331_04055 PF00108 Thiolase, N-terminal domain LA331_04065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_04065 PF03466 LysR substrate binding domain LA331_04070 PF00923 Transaldolase/Fructose-6-phosphate aldolase LA331_04080 PF03594 Benzoate membrane transport protein LA331_04085 PF00893 Small Multidrug Resistance protein LA331_04090 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_04095 PF00135 Carboxylesterase family LA331_04100 PF00582 Universal stress protein family LA331_04105 PF00582 Universal stress protein family LA331_04115 PF11940 Domain of unknown function (DUF3458) Ig-like fold LA331_04115 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LA331_04115 PF01433 Peptidase family M1 domain LA331_04130 PF02110 Hydroxyethylthiazole kinase family LA331_04135 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_04140 PF03741 Integral membrane protein TerC family LA331_04140 PF03471 Transporter associated domain LA331_04155 PF00171 Aldehyde dehydrogenase family LA331_04160 PF01274 Malate synthase LA331_04165 PF03969 AFG1-like ATPase LA331_04180 PF03956 Lysine exporter LysO LA331_04190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LA331_04200 PF00216 Bacterial DNA-binding protein LA331_04205 PF00575 S1 RNA binding domain LA331_04210 PF02224 Cytidylate kinase LA331_04220 PF14437 MafB19-like deaminase LA331_04230 PF03167 Uracil DNA glycosylase superfamily LA331_04240 PF03934 Type II secretion system (T2SS), protein K LA331_04245 PF11612 Type II secretion system (T2SS), protein J LA331_04245 PF07963 Prokaryotic N-terminal methylation motif LA331_04250 PF07963 Prokaryotic N-terminal methylation motif LA331_04250 PF02501 Type II secretion system (T2SS), protein I LA331_04255 PF12019 Type II transport protein GspH LA331_04260 PF00440 Bacterial regulatory proteins, tetR family LA331_04265 PF01026 TatD related DNase LA331_04275 PF09115 DNA polymerase III, delta subunit, C terminal LA331_04280 PF02348 Cytidylyltransferase LA331_04285 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LA331_04290 PF00664 ABC transporter transmembrane region LA331_04290 PF00005 ABC transporter LA331_04300 PF01618 MotA/TolQ/ExbB proton channel family LA331_04310 PF17762 HTH domain found in ParB protein LA331_04310 PF02195 ParB-like nuclease domain LA331_04315 PF13614 AAA domain LA331_04320 PF02527 rRNA small subunit methyltransferase G LA331_04325 PF00483 Nucleotidyl transferase LA331_04330 PF01636 Phosphotransferase enzyme family LA331_04335 PF03968 OstA-like protein LA331_04335 PF04453 LPS transport system D LA331_04340 PF09312 SurA N-terminal domain LA331_04340 PF00639 PPIC-type PPIASE domain LA331_04345 PF17209 Hfq protein LA331_04355 PF08676 MutL C terminal dimerisation domain LA331_04355 PF01119 DNA mismatch repair protein, C-terminal domain LA331_04360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LA331_04365 PF01479 S4 domain LA331_04365 PF00849 RNA pseudouridylate synthase LA331_04380 PF01479 S4 domain LA331_04380 PF00849 RNA pseudouridylate synthase LA331_04385 PF04284 Protein of unknown function (DUF441) LA331_04390 PF14493 Helix-turn-helix domain LA331_04390 PF05970 PIF1-like helicase LA331_04405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LA331_04405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LA331_04410 PF11898 Domain of unknown function (DUF3418) LA331_04410 PF04408 Helicase associated domain (HA2) LA331_04410 PF00271 Helicase conserved C-terminal domain LA331_04410 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LA331_04410 PF00270 DEAD/DEAH box helicase LA331_04415 PF10417 C-terminal domain of 1-Cys peroxiredoxin LA331_04415 PF00578 AhpC/TSA family LA331_04425 PF01596 O-methyltransferase LA331_04435 PF13192 Thioredoxin domain LA331_04435 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_04455 PF01810 LysE type translocator LA331_04465 PF02075 Crossover junction endodeoxyribonuclease RuvC LA331_04470 PF00708 Acylphosphatase LA331_04475 PF01256 Carbohydrate kinase LA331_04475 PF03853 YjeF-related protein N-terminus LA331_04480 PF08331 Domain of unknown function (DUF1730) LA331_04490 PF06968 Biotin and Thiamin Synthesis associated domain LA331_04490 PF04055 Radical SAM superfamily LA331_04550 PF12161 HsdM N-terminal domain LA331_04550 PF02384 N-6 DNA Methylase LA331_04565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LA331_04565 PF12008 Type I restriction and modification enzyme - subunit R C terminal LA331_04565 PF18766 SWI2/SNF2 ATPase LA331_04570 PF13356 Arm DNA-binding domain LA331_04570 PF00589 Phage integrase family LA331_04585 PF00004 ATPase family associated with various cellular activities (AAA) LA331_04585 PF07724 AAA domain (Cdc48 subfamily) LA331_04585 PF17871 AAA lid domain LA331_04585 PF02861 Clp amino terminal domain, pathogenicity island component LA331_04585 PF10431 C-terminal, D2-small domain, of ClpB protein LA331_04610 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_04625 PF00005 ABC transporter LA331_04625 PF17755 UvrA DNA-binding domain LA331_04625 PF17760 UvrA interaction domain LA331_04630 PF13195 Protein of unknown function (DUF4011) LA331_04630 PF13087 AAA domain LA331_04630 PF13195 Protein of unknown function (DUF4011) LA331_04630 PF13087 AAA domain LA331_04630 PF13086 AAA domain LA331_04630 PF13086 AAA domain LA331_04690 PF08241 Methyltransferase domain LA331_04725 PF02899 Phage integrase, N-terminal SAM-like domain LA331_04725 PF00589 Phage integrase family LA331_04735 PF13005 zinc-finger binding domain of transposase IS66 LA331_04735 PF03050 Transposase IS66 family LA331_04735 PF13817 IS66 C-terminal element LA331_04735 PF13007 Transposase C of IS166 homeodomain LA331_04785 PF01553 Acyltransferase LA331_04790 PF01709 Transcriptional regulator LA331_04825 PF03180 NLPA lipoprotein LA331_04830 PF09383 NIL domain LA331_04830 PF00005 ABC transporter LA331_04840 PF06071 Protein of unknown function (DUF933) LA331_04840 PF01926 50S ribosome-binding GTPase LA331_04845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA331_04845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA331_04855 PF03591 AzlC protein LA331_04860 PF05437 Branched-chain amino acid transport protein (AzlD) LA331_04870 PF02222 ATP-grasp domain LA331_04875 PF01966 HD domain LA331_04875 PF01909 Nucleotidyltransferase domain LA331_04875 PF08335 GlnD PII-uridylyltransferase LA331_04880 PF00155 Aminotransferase class I and II LA331_04890 PF00255 Glutathione peroxidase LA331_04895 PF01641 SelR domain LA331_04900 PF00155 Aminotransferase class I and II LA331_04910 PF01757 Acyltransferase family LA331_04930 PF00849 RNA pseudouridylate synthase LA331_04950 PF00576 HIUase/Transthyretin family LA331_04965 PF07943 Penicillin-binding protein 5, C-terminal domain LA331_04965 PF00768 D-alanyl-D-alanine carboxypeptidase LA331_04970 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_04975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA331_04995 PF00709 Adenylosuccinate synthetase LA331_05000 PF13393 Histidyl-tRNA synthetase LA331_05025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA331_05025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA331_05030 PF02272 DHHA1 domain LA331_05030 PF01411 tRNA synthetases class II (A) LA331_05030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA331_05035 PF01842 ACT domain LA331_05035 PF00696 Amino acid kinase family LA331_05035 PF13840 ACT domain LA331_05040 PF02599 Global regulator protein family LA331_05045 PF01351 Ribonuclease HII LA331_05060 PF00962 Adenosine/AMP deaminase LA331_05065 PF00860 Permease family LA331_05075 PF03883 Peroxide stress protein YaaA LA331_05095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA331_05100 PF00155 Aminotransferase class I and II LA331_05105 PF01842 ACT domain LA331_05105 PF01817 Chorismate mutase type II LA331_05105 PF00800 Prephenate dehydratase LA331_05110 PF01965 DJ-1/PfpI family LA331_05115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_05115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_05115 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_05120 PF00375 Sodium:dicarboxylate symporter family LA331_05125 PF00591 Glycosyl transferase family, a/b domain LA331_05125 PF02885 Glycosyl transferase family, helical bundle domain LA331_05130 PF07023 Protein of unknown function (DUF1315) LA331_05135 PF01513 ATP-NAD kinase LA331_05140 PF00905 Penicillin binding protein transpeptidase domain LA331_05140 PF00912 Transglycosylase LA331_05140 PF14814 Bifunctional transglycosylase second domain LA331_05150 PF00293 NUDIX domain LA331_05160 PF08521 Two-component sensor kinase N-terminal LA331_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_05160 PF00512 His Kinase A (phospho-acceptor) domain LA331_05165 PF00072 Response regulator receiver domain LA331_05165 PF00486 Transcriptional regulatory protein, C terminal LA331_05175 PF00437 Type II/IV secretion system protein LA331_05175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA331_05190 PF01980 tRNA-methyltransferase O LA331_05190 PF18389 TrmO C-terminal domain LA331_05195 PF00175 Oxidoreductase NAD-binding domain LA331_05195 PF00970 Oxidoreductase FAD-binding domain LA331_05200 PF01011 PQQ enzyme repeat LA331_05200 PF13360 PQQ-like domain LA331_05230 PF13411 MerR HTH family regulatory protein LA331_05235 PF01136 Peptidase family U32 LA331_05235 PF16325 Peptidase family U32 C-terminal domain LA331_05240 PF00037 4Fe-4S binding domain LA331_05245 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_05245 PF13192 Thioredoxin domain LA331_05255 PF05816 Toxic anion resistance protein (TelA) LA331_05265 PF03350 Uncharacterized protein family, UPF0114 LA331_05270 PF01272 Transcription elongation factor, GreA/GreB, C-term LA331_05270 PF03449 Transcription elongation factor, N-terminal LA331_05275 PF00464 Serine hydroxymethyltransferase LA331_05315 PF00589 Phage integrase family LA331_05515 PF05866 Endodeoxyribonuclease RusA LA331_05675 PF00005 ABC transporter LA331_05680 PF01061 ABC-2 type transporter LA331_05685 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LA331_05685 PF14489 QueF-like protein LA331_05695 PF13406 Transglycosylase SLT domain LA331_05700 PF03330 Lytic transglycolase LA331_05700 PF05036 Sporulation related domain LA331_05715 PF00889 Elongation factor TS LA331_05720 PF00318 Ribosomal protein S2 LA331_05725 PF00557 Metallopeptidase family M24 LA331_05730 PF00155 Aminotransferase class I and II LA331_05735 PF01554 MatE LA331_05770 PF13817 IS66 C-terminal element LA331_05770 PF13007 Transposase C of IS166 homeodomain LA331_05770 PF13005 zinc-finger binding domain of transposase IS66 LA331_05770 PF03050 Transposase IS66 family LA331_05775 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LA331_05780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LA331_05785 PF02565 Recombination protein O C terminal LA331_05785 PF11967 Recombination protein O N terminal LA331_05795 PF01926 50S ribosome-binding GTPase LA331_05795 PF07650 KH domain LA331_05800 PF00035 Double-stranded RNA binding motif LA331_05800 PF14622 Ribonuclease-III-like LA331_05810 PF10502 Signal peptidase, peptidase S26 LA331_05815 PF06421 GTP-binding protein LepA C-terminus LA331_05815 PF03144 Elongation factor Tu domain 2 LA331_05815 PF00679 Elongation factor G C-terminus LA331_05815 PF00009 Elongation factor Tu GTP binding domain LA331_05825 PF13180 PDZ domain LA331_05830 PF00890 FAD binding domain LA331_05830 PF02910 Fumarate reductase flavoprotein C-term LA331_05840 PF02223 Thymidylate kinase LA331_05845 PF02618 YceG-like family LA331_05870 PF00528 Binding-protein-dependent transport system inner membrane component LA331_05875 PF00528 Binding-protein-dependent transport system inner membrane component LA331_05880 PF00005 ABC transporter LA331_05880 PF12857 TOBE-like domain LA331_05885 PF03466 LysR substrate binding domain LA331_05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_05900 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LA331_05900 PF14602 Hexapeptide repeat of succinyl-transferase LA331_05900 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_05905 PF04055 Radical SAM superfamily LA331_05910 PF06508 Queuosine biosynthesis protein QueC LA331_05920 PF00578 AhpC/TSA family LA331_05925 PF01810 LysE type translocator LA331_05930 PF03466 LysR substrate binding domain LA331_05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_05935 PF04264 YceI-like domain LA331_05940 PF00293 NUDIX domain LA331_05940 PF01467 Cytidylyltransferase-like LA331_05945 PF00378 Enoyl-CoA hydratase/isomerase LA331_05950 PF00881 Nitroreductase family LA331_05965 PF01784 NIF3 (NGG1p interacting factor 3) LA331_05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_05970 PF03466 LysR substrate binding domain LA331_05980 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LA331_05980 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LA331_05980 PF02769 AIR synthase related protein, C-terminal domain LA331_05995 PF01966 HD domain LA331_06000 PF07499 RuvA, C-terminal domain LA331_06000 PF01330 RuvA N terminal domain LA331_06005 PF17864 RuvB AAA lid domain LA331_06005 PF05491 RuvB C-terminal winged helix domain LA331_06005 PF05496 Holliday junction DNA helicase RuvB P-loop domain LA331_06010 PF07687 Peptidase dimerisation domain LA331_06010 PF01546 Peptidase family M20/M25/M40 LA331_06015 PF03061 Thioesterase superfamily LA331_06020 PF01618 MotA/TolQ/ExbB proton channel family LA331_06025 PF02472 Biopolymer transport protein ExbD/TolR LA331_06035 PF04052 TolB amino-terminal domain LA331_06035 PF07676 WD40-like Beta Propeller Repeat LA331_06040 PF00691 OmpA family LA331_06050 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LA331_06055 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA331_06055 PF00588 SpoU rRNA Methylase family LA331_06085 PF11638 DnaA N-terminal domain LA331_06085 PF08299 Bacterial dnaA protein helix-turn-helix LA331_06085 PF00308 Bacterial dnaA protein LA331_06090 PF01594 AI-2E family transporter LA331_06095 PF00586 AIR synthase related protein, N-terminal domain LA331_06095 PF02769 AIR synthase related protein, C-terminal domain LA331_06100 PF00551 Formyl transferase LA331_06105 PF00561 alpha/beta hydrolase fold LA331_06105 PF08386 TAP-like protein LA331_06110 PF01343 Peptidase family S49 LA331_06110 PF06965 Na+/H+ antiporter 1 LA331_06120 PF03772 Competence protein LA331_06120 PF13567 Domain of unknown function (DUF4131) LA331_06120 PF00753 Metallo-beta-lactamase superfamily LA331_06125 PF00005 ABC transporter LA331_06130 PF12704 MacB-like periplasmic core domain LA331_06130 PF02687 FtsX-like permease family LA331_06145 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LA331_06160 PF00266 Aminotransferase class-V LA331_06170 PF13533 Biotin-lipoyl like LA331_06190 PF03989 DNA gyrase C-terminal domain, beta-propeller LA331_06190 PF00521 DNA gyrase/topoisomerase IV, subunit A LA331_06200 PF01012 Electron transfer flavoprotein domain LA331_06200 PF00766 Electron transfer flavoprotein FAD-binding domain LA331_06205 PF01012 Electron transfer flavoprotein domain LA331_06210 PF01810 LysE type translocator LA331_06215 PF01037 Lrp/AsnC ligand binding domain LA331_06225 PF00589 Phage integrase family LA331_06225 PF02899 Phage integrase, N-terminal SAM-like domain LA331_06230 PF00561 alpha/beta hydrolase fold LA331_06235 PF01678 Diaminopimelate epimerase LA331_06240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA331_06240 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA331_06250 PF00324 Amino acid permease LA331_06255 PF01235 Sodium:alanine symporter family LA331_06265 PF18073 Rubredoxin metal binding domain LA331_06275 PF08238 Sel1 repeat LA331_06300 PF13359 DDE superfamily endonuclease LA331_06300 PF13613 Helix-turn-helix of DDE superfamily endonuclease LA331_06310 PF05221 S-adenosyl-L-homocysteine hydrolase LA331_06310 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LA331_06315 PF02219 Methylenetetrahydrofolate reductase LA331_06320 PF04452 RNA methyltransferase LA331_06325 PF00563 EAL domain LA331_06325 PF00498 FHA domain LA331_06325 PF00990 Diguanylate cyclase, GGDEF domain LA331_06330 PF00390 Malic enzyme, N-terminal domain LA331_06330 PF01515 Phosphate acetyl/butaryl transferase LA331_06330 PF03949 Malic enzyme, NAD binding domain LA331_06335 PF01743 Poly A polymerase head domain LA331_06335 PF12627 Probable RNA and SrmB- binding site of polymerase A LA331_06345 PF00152 tRNA synthetases class II (D, K and N) LA331_06350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA331_06350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA331_06350 PF11890 Domain of unknown function (DUF3410) LA331_06355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_06355 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_06355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_06360 PF03466 LysR substrate binding domain LA331_06375 PF03449 Transcription elongation factor, N-terminal LA331_06375 PF01272 Transcription elongation factor, GreA/GreB, C-term LA331_06380 PF01464 Transglycosylase SLT domain LA331_06380 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA331_06390 PF01171 PP-loop family LA331_06395 PF01551 Peptidase family M23 LA331_06395 PF10145 Phage-related minor tail protein LA331_06395 PF01464 Transglycosylase SLT domain LA331_06400 PF01435 Peptidase family M48 LA331_06410 PF00571 CBS domain LA331_06410 PF01769 Divalent cation transporter LA331_06410 PF03448 MgtE intracellular N domain LA331_06415 PF00873 AcrB/AcrD/AcrF family LA331_06420 PF00873 AcrB/AcrD/AcrF family LA331_06425 PF00463 Isocitrate lyase family LA331_06430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_06430 PF03466 LysR substrate binding domain LA331_06435 PF03471 Transporter associated domain LA331_06435 PF01595 Cyclin M transmembrane N-terminal domain LA331_06435 PF00571 CBS domain LA331_06470 PF00809 Pterin binding enzyme LA331_06480 PF00004 ATPase family associated with various cellular activities (AAA) LA331_06480 PF17862 AAA+ lid domain LA331_06480 PF06480 FtsH Extracellular LA331_06480 PF01434 Peptidase family M41 LA331_06485 PF01728 FtsJ-like methyltransferase LA331_06490 PF01985 CRS1 / YhbY (CRM) domain LA331_06510 PF00117 Glutamine amidotransferase class-I LA331_06510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LA331_06515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA331_06515 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LA331_06515 PF02142 MGS-like domain LA331_06520 PF01272 Transcription elongation factor, GreA/GreB, C-term LA331_06520 PF03449 Transcription elongation factor, N-terminal LA331_06525 PF00440 Bacterial regulatory proteins, tetR family LA331_06530 PF01042 Endoribonuclease L-PSP LA331_06535 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_06575 PF00037 4Fe-4S binding domain LA331_06580 PF01467 Cytidylyltransferase-like LA331_06585 PF01668 SmpB protein LA331_06590 PF03358 NADPH-dependent FMN reductase LA331_06595 PF02578 Multi-copper polyphenol oxidoreductase laccase LA331_06600 PF01479 S4 domain LA331_06600 PF00849 RNA pseudouridylate synthase LA331_06605 PF13525 Outer membrane lipoprotein LA331_06610 PF08278 DNA primase DnaG DnaB-binding LA331_06610 PF10410 DnaB-helicase binding domain of primase LA331_06610 PF08275 DNA primase catalytic core, N-terminal domain LA331_06610 PF01807 CHC2 zinc finger LA331_06615 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LA331_06615 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LA331_06615 PF01488 Shikimate / quinate 5-dehydrogenase LA331_06625 PF03550 Outer membrane lipoprotein LolB LA331_06630 PF08544 GHMP kinases C terminal LA331_06630 PF00288 GHMP kinases N terminal domain LA331_06655 PF14572 Phosphoribosyl synthetase-associated domain LA331_06655 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LA331_06660 PF01386 Ribosomal L25p family LA331_06665 PF01195 Peptidyl-tRNA hydrolase LA331_06670 PF02261 Aspartate decarboxylase LA331_06685 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LA331_06700 PF17773 UPF0176 acylphosphatase like domain LA331_06700 PF00581 Rhodanese-like domain LA331_06710 PF09335 SNARE associated Golgi protein LA331_06730 PF04545 Sigma-70, region 4 LA331_06730 PF04542 Sigma-70 region 2 LA331_06730 PF04546 Sigma-70, non-essential region LA331_06730 PF03979 Sigma-70 factor, region 1.1 LA331_06730 PF00140 Sigma-70 factor, region 1.2 LA331_06730 PF04539 Sigma-70 region 3 LA331_06740 PF03099 Biotin/lipoate A/B protein ligase family LA331_06750 PF00465 Iron-containing alcohol dehydrogenase LA331_06755 PF13520 Amino acid permease LA331_06765 PF00588 SpoU rRNA Methylase family LA331_06770 PF14824 Sirohaem biosynthesis protein central LA331_06770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA331_06770 PF10414 Sirohaem synthase dimerisation region LA331_06775 PF02403 Seryl-tRNA synthetase N-terminal domain LA331_06775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA331_06785 PF03548 Outer membrane lipoprotein carrier protein LolA LA331_06790 PF01016 Ribosomal L27 protein LA331_06795 PF00829 Ribosomal prokaryotic L21 protein LA331_06800 PF00348 Polyprenyl synthetase LA331_06810 PF01569 PAP2 superfamily LA331_06815 PF00529 HlyD membrane-fusion protein of T1SS LA331_06815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA331_06820 PF00873 AcrB/AcrD/AcrF family LA331_06825 PF02321 Outer membrane efflux protein LA331_06830 PF01906 Putative heavy-metal-binding LA331_06835 PF01906 Putative heavy-metal-binding LA331_06840 PF01327 Polypeptide deformylase LA331_06845 PF00083 Sugar (and other) transporter LA331_06875 PF00990 Diguanylate cyclase, GGDEF domain LA331_06880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA331_06885 PF02308 MgtC family LA331_06890 PF07152 YaeQ protein LA331_06895 PF07683 Cobalamin synthesis protein cobW C-terminal domain LA331_06895 PF02492 CobW/HypB/UreG, nucleotide-binding domain LA331_06915 PF07690 Major Facilitator Superfamily LA331_06920 PF16859 Tetracyclin repressor-like, C-terminal domain LA331_06920 PF00440 Bacterial regulatory proteins, tetR family LA331_06925 PF03061 Thioesterase superfamily LA331_06935 PF01734 Patatin-like phospholipase LA331_06940 PF02417 Chromate transporter LA331_06945 PF01235 Sodium:alanine symporter family LA331_06950 PF03616 Sodium/glutamate symporter LA331_06955 PF00881 Nitroreductase family LA331_06960 PF07690 Major Facilitator Superfamily LA331_06965 PF12805 FUSC-like inner membrane protein yccS LA331_06975 PF00667 FAD binding domain LA331_06975 PF00258 Flavodoxin LA331_06975 PF00175 Oxidoreductase NAD-binding domain LA331_07035 PF04304 Protein of unknown function (DUF454) LA331_07050 PF01546 Peptidase family M20/M25/M40 LA331_07050 PF07687 Peptidase dimerisation domain LA331_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_07060 PF01584 CheW-like domain LA331_07060 PF01627 Hpt domain LA331_07060 PF00072 Response regulator receiver domain LA331_07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA331_07065 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LA331_07070 PF01584 CheW-like domain LA331_07075 PF00072 Response regulator receiver domain LA331_07080 PF00072 Response regulator receiver domain LA331_07095 PF00873 AcrB/AcrD/AcrF family LA331_07100 PF03129 Anticodon binding domain LA331_07100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA331_07100 PF04073 Aminoacyl-tRNA editing domain LA331_07125 PF00692 dUTPase LA331_07135 PF16868 NMT1-like family LA331_07150 PF10609 NUBPL iron-transfer P-loop NTPase LA331_07165 PF01588 Putative tRNA binding domain LA331_07165 PF09334 tRNA synthetases class I (M) LA331_07175 PF00753 Metallo-beta-lactamase superfamily LA331_07180 PF00909 Ammonium Transporter Family LA331_07220 PF05552 Conserved TM helix LA331_07235 PF00175 Oxidoreductase NAD-binding domain LA331_07235 PF00970 Oxidoreductase FAD-binding domain LA331_07240 PF03466 LysR substrate binding domain LA331_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_07255 PF00313 'Cold-shock' DNA-binding domain LA331_07265 PF00361 Proton-conducting membrane transporter LA331_07270 PF00361 Proton-conducting membrane transporter LA331_07275 PF00361 Proton-conducting membrane transporter LA331_07275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LA331_07280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LA331_07285 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LA331_07290 PF12838 4Fe-4S dicluster domain LA331_07295 PF00146 NADH dehydrogenase LA331_07300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA331_07300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LA331_07300 PF00384 Molybdopterin oxidoreductase LA331_07305 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LA331_07305 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LA331_07305 PF10531 SLBB domain LA331_07315 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LA331_07315 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LA331_07320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LA331_07325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LA331_07335 PF00672 HAMP domain LA331_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_07335 PF00512 His Kinase A (phospho-acceptor) domain LA331_07340 PF00072 Response regulator receiver domain LA331_07340 PF00486 Transcriptional regulatory protein, C terminal LA331_07345 PF00317 Ribonucleotide reductase, all-alpha domain LA331_07345 PF02867 Ribonucleotide reductase, barrel domain LA331_07345 PF03477 ATP cone domain LA331_07350 PF00268 Ribonucleotide reductase, small chain LA331_07360 PF05656 Protein of unknown function (DUF805) LA331_07395 PF13419 Haloacid dehalogenase-like hydrolase LA331_07400 PF08543 Phosphomethylpyrimidine kinase LA331_07420 PF03831 PhnA domain LA331_07420 PF08274 PhnA Zinc-Ribbon LA331_07440 PF00849 RNA pseudouridylate synthase LA331_07485 PF00330 Aconitase family (aconitate hydratase) LA331_07485 PF00694 Aconitase C-terminal domain LA331_07490 PF07732 Multicopper oxidase LA331_07490 PF07731 Multicopper oxidase LA331_07495 PF01571 Aminomethyltransferase folate-binding domain LA331_07505 PF03547 Membrane transport protein LA331_07510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA331_07515 PF04966 Carbohydrate-selective porin, OprB family LA331_07520 PF06827 Zinc finger found in FPG and IleRS LA331_07520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LA331_07520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LA331_07535 PF13005 zinc-finger binding domain of transposase IS66 LA331_07535 PF13817 IS66 C-terminal element LA331_07535 PF03050 Transposase IS66 family LA331_07535 PF13007 Transposase C of IS166 homeodomain LA331_07540 PF09312 SurA N-terminal domain LA331_07540 PF00639 PPIC-type PPIASE domain LA331_07545 PF01741 Large-conductance mechanosensitive channel, MscL LA331_07550 PF00679 Elongation factor G C-terminus LA331_07550 PF00009 Elongation factor Tu GTP binding domain LA331_07550 PF03144 Elongation factor Tu domain 2 LA331_07555 PF00860 Permease family LA331_07560 PF05175 Methyltransferase small domain LA331_07560 PF08468 Methyltransferase small domain N-terminal LA331_07565 PF00324 Amino acid permease LA331_07575 PF13505 Outer membrane protein beta-barrel domain LA331_07575 PF00691 OmpA family LA331_07580 PF00114 Pilin (bacterial filament) LA331_07580 PF07963 Prokaryotic N-terminal methylation motif LA331_07585 PF02803 Thiolase, C-terminal domain LA331_07585 PF00108 Thiolase, N-terminal domain LA331_07605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA331_07605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA331_07610 PF02515 CoA-transferase family III LA331_07615 PF02311 AraC-like ligand binding domain LA331_07615 PF12833 Helix-turn-helix domain LA331_07620 PF02803 Thiolase, C-terminal domain LA331_07620 PF00108 Thiolase, N-terminal domain LA331_07625 PF00378 Enoyl-CoA hydratase/isomerase LA331_07625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA331_07625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA331_07650 PF03006 Haemolysin-III related LA331_07655 PF00083 Sugar (and other) transporter LA331_07655 PF07690 Major Facilitator Superfamily LA331_07665 PF00149 Calcineurin-like phosphoesterase LA331_07665 PF10518 TAT (twin-arginine translocation) pathway signal sequence LA331_07670 PF13091 PLD-like domain LA331_07685 PF13167 GTP-binding GTPase N-terminal LA331_07685 PF01926 50S ribosome-binding GTPase LA331_07685 PF16360 GTP-binding GTPase Middle Region LA331_07715 PF00149 Calcineurin-like phosphoesterase LA331_07720 PF00398 Ribosomal RNA adenine dimethylase LA331_07725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LA331_07730 PF00572 Ribosomal protein L13 LA331_07735 PF00380 Ribosomal protein S9/S16 LA331_07740 PF00043 Glutathione S-transferase, C-terminal domain LA331_07740 PF02798 Glutathione S-transferase, N-terminal domain LA331_07745 PF04386 Stringent starvation protein B LA331_07820 PF00795 Carbon-nitrogen hydrolase LA331_07825 PF02566 OsmC-like protein LA331_07830 PF00437 Type II/IV secretion system protein LA331_07850 PF01367 5'-3' exonuclease, C-terminal SAM fold LA331_07850 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LA331_07850 PF01612 3'-5' exonuclease LA331_07850 PF00476 DNA polymerase family A LA331_07855 PF02325 YGGT family LA331_07860 PF03807 NADP oxidoreductase coenzyme F420-dependent LA331_07860 PF14748 Pyrroline-5-carboxylate reductase dimerisation LA331_07865 PF01171 PP-loop family LA331_07865 PF09179 TilS substrate binding domain LA331_07865 PF11734 TilS substrate C-terminal domain LA331_07870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LA331_07875 PF02541 Ppx/GppA phosphatase family LA331_07880 PF00085 Thioredoxin LA331_07885 PF07497 Rho termination factor, RNA-binding domain LA331_07885 PF07498 Rho termination factor, N-terminal domain LA331_07885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA331_07895 PF00216 Bacterial DNA-binding protein LA331_07900 PF03483 B3/4 domain LA331_07900 PF03484 tRNA synthetase B5 domain LA331_07900 PF03147 Ferredoxin-fold anticodon binding domain LA331_07900 PF01588 Putative tRNA binding domain LA331_07900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LA331_07905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LA331_07905 PF01409 tRNA synthetases class II core domain (F) LA331_07915 PF00453 Ribosomal protein L20 LA331_07920 PF01632 Ribosomal protein L35 LA331_07930 PF09335 SNARE associated Golgi protein LA331_07940 PF00043 Glutathione S-transferase, C-terminal domain LA331_07940 PF02798 Glutathione S-transferase, N-terminal domain LA331_07945 PF00011 Hsp20/alpha crystallin family LA331_07965 PF05198 Translation initiation factor IF-3, N-terminal domain LA331_07965 PF00707 Translation initiation factor IF-3, C-terminal domain LA331_07970 PF03129 Anticodon binding domain LA331_07970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA331_07970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA331_07970 PF02824 TGS domain LA331_07985 PF13193 AMP-binding enzyme C-terminal domain LA331_07985 PF00501 AMP-binding enzyme LA331_07995 PF02547 Queuosine biosynthesis protein LA331_08005 PF04011 LemA family LA331_08015 PF01702 Queuine tRNA-ribosyltransferase LA331_08020 PF02699 Preprotein translocase subunit LA331_08025 PF02355 Protein export membrane protein LA331_08025 PF07549 SecD/SecF GG Motif LA331_08025 PF13721 SecD export protein N-terminal TM region LA331_08030 PF02355 Protein export membrane protein LA331_08030 PF07549 SecD/SecF GG Motif LA331_08040 PF13291 ACT domain LA331_08040 PF04607 Region found in RelA / SpoT proteins LA331_08040 PF02824 TGS domain LA331_08045 PF05958 tRNA (Uracil-5-)-methyltransferase LA331_08055 PF00291 Pyridoxal-phosphate dependent enzyme LA331_08060 PF00072 Response regulator receiver domain LA331_08060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LA331_08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_08060 PF00672 HAMP domain LA331_08060 PF01627 Hpt domain LA331_08060 PF00512 His Kinase A (phospho-acceptor) domain LA331_08065 PF00378 Enoyl-CoA hydratase/isomerase LA331_08070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LA331_08070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA331_08075 PF01261 Xylose isomerase-like TIM barrel LA331_08085 PF02233 NAD(P) transhydrogenase beta subunit LA331_08090 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LA331_08095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LA331_08095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LA331_08100 PF07690 Major Facilitator Superfamily LA331_08110 PF01207 Dihydrouridine synthase (Dus) LA331_08120 PF04127 DNA / pantothenate metabolism flavoprotein LA331_08120 PF02441 Flavoprotein LA331_08125 PF04002 RadC-like JAB domain LA331_08130 PF01062 Bestrophin, RFP-TM, chloride channel LA331_08135 PF02811 PHP domain LA331_08140 PF04279 Intracellular septation protein A LA331_08145 PF03795 YCII-related domain LA331_08155 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LA331_08155 PF01266 FAD dependent oxidoreductase LA331_08165 PF04461 Protein of unknown function (DUF520) LA331_08175 PF03061 Thioesterase superfamily LA331_08180 PF00085 Thioredoxin LA331_08190 PF04273 Putative phosphatase (DUF442) LA331_08190 PF00753 Metallo-beta-lactamase superfamily LA331_08200 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_08200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA331_08235 PF01066 CDP-alcohol phosphatidyltransferase LA331_08240 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LA331_08270 PF00056 lactate/malate dehydrogenase, NAD binding domain LA331_08270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LA331_08280 PF01464 Transglycosylase SLT domain LA331_08280 PF10145 Phage-related minor tail protein LA331_08280 PF01551 Peptidase family M23 LA331_08285 PF00919 Uncharacterized protein family UPF0004 LA331_08285 PF04055 Radical SAM superfamily LA331_08285 PF01938 TRAM domain LA331_08290 PF02562 PhoH-like protein LA331_08295 PF02130 Uncharacterized protein family UPF0054 LA331_08335 PF03358 NADPH-dependent FMN reductase LA331_08340 PF03631 Virulence factor BrkB LA331_08350 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA331_08390 PF17876 Cold shock domain LA331_08390 PF08461 Ribonuclease R winged-helix domain LA331_08390 PF08206 Ribonuclease B OB domain LA331_08390 PF00773 RNB domain LA331_08390 PF00575 S1 RNA binding domain LA331_08400 PF01432 Peptidase family M3 LA331_08405 PF09526 Probable metal-binding protein (DUF2387) LA331_08415 PF00892 EamA-like transporter family LA331_08440 PF03937 Flavinator of succinate dehydrogenase LA331_08445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_08445 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_08445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_08450 PF00743 Flavin-binding monooxygenase-like LA331_08455 PF01196 Ribosomal protein L17 LA331_08460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LA331_08460 PF01000 RNA polymerase Rpb3/RpoA insert domain LA331_08460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LA331_08465 PF00163 Ribosomal protein S4/S9 N-terminal domain LA331_08465 PF01479 S4 domain LA331_08470 PF00411 Ribosomal protein S11 LA331_08475 PF00416 Ribosomal protein S13/S18 LA331_08480 PF00444 Ribosomal protein L36 LA331_08485 PF00344 SecY translocase LA331_08490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LA331_08495 PF00327 Ribosomal protein L30p/L7e LA331_08500 PF00333 Ribosomal protein S5, N-terminal domain LA331_08500 PF03719 Ribosomal protein S5, C-terminal domain LA331_08505 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LA331_08510 PF00347 Ribosomal protein L6 LA331_08515 PF00410 Ribosomal protein S8 LA331_08520 PF00253 Ribosomal protein S14p/S29e LA331_08525 PF00281 Ribosomal protein L5 LA331_08525 PF00673 ribosomal L5P family C-terminus LA331_08530 PF00467 KOW motif LA331_08530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LA331_08535 PF00238 Ribosomal protein L14p/L23e LA331_08540 PF00366 Ribosomal protein S17 LA331_08545 PF00831 Ribosomal L29 protein LA331_08550 PF00252 Ribosomal protein L16p/L10e LA331_08560 PF00237 Ribosomal protein L22p/L17e LA331_08565 PF00203 Ribosomal protein S19 LA331_08570 PF00181 Ribosomal Proteins L2, RNA binding domain LA331_08570 PF03947 Ribosomal Proteins L2, C-terminal domain LA331_08575 PF00276 Ribosomal protein L23 LA331_08580 PF00573 Ribosomal protein L4/L1 family LA331_08585 PF00297 Ribosomal protein L3 LA331_08590 PF00338 Ribosomal protein S10p/S20e LA331_08595 PF00117 Glutamine amidotransferase class-I LA331_08600 PF01053 Cys/Met metabolism PLP-dependent enzyme LA331_08610 PF00970 Oxidoreductase FAD-binding domain LA331_08610 PF00042 Globin LA331_08610 PF00175 Oxidoreductase NAD-binding domain LA331_08615 PF02082 Transcriptional regulator LA331_08620 PF01926 50S ribosome-binding GTPase LA331_08635 PF00375 Sodium:dicarboxylate symporter family LA331_08645 PF01553 Acyltransferase LA331_08655 PF00270 DEAD/DEAH box helicase LA331_08655 PF00271 Helicase conserved C-terminal domain LA331_08655 PF17191 RecG wedge domain LA331_08660 PF00156 Phosphoribosyl transferase domain LA331_08670 PF03641 Possible lysine decarboxylase LA331_08675 PF01544 CorA-like Mg2+ transporter protein LA331_08685 PF05494 MlaC protein LA331_08690 PF02470 MlaD protein LA331_08695 PF02405 Permease MlaE LA331_08700 PF00005 ABC transporter LA331_08705 PF03050 Transposase IS66 family LA331_08705 PF13817 IS66 C-terminal element LA331_08705 PF13007 Transposase C of IS166 homeodomain LA331_08705 PF13005 zinc-finger binding domain of transposase IS66 LA331_08720 PF00271 Helicase conserved C-terminal domain LA331_08720 PF00270 DEAD/DEAH box helicase LA331_08725 PF00459 Inositol monophosphatase family LA331_08730 PF02780 Transketolase, C-terminal domain LA331_08730 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LA331_08730 PF02779 Transketolase, pyrimidine binding domain LA331_08735 PF00925 GTP cyclohydrolase II LA331_08740 PF06969 HemN C-terminal domain LA331_08740 PF04055 Radical SAM superfamily LA331_08745 PF01218 Coproporphyrinogen III oxidase LA331_08755 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LA331_08755 PF01488 Shikimate / quinate 5-dehydrogenase LA331_08755 PF08501 Shikimate dehydrogenase substrate binding domain LA331_08760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_08760 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_08760 PF12806 Acetyl-CoA dehydrogenase C-terminal like LA331_08760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_08765 PF00313 'Cold-shock' DNA-binding domain LA331_08780 PF06969 HemN C-terminal domain LA331_08780 PF04055 Radical SAM superfamily LA331_08790 PF01554 MatE LA331_08800 PF03109 ABC1 family LA331_08805 PF01197 Ribosomal protein L31 LA331_08810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LA331_08825 PF08241 Methyltransferase domain LA331_08840 PF13614 AAA domain LA331_08845 PF01594 AI-2E family transporter LA331_08850 PF00080 Copper/zinc superoxide dismutase (SODC) LA331_08855 PF12805 FUSC-like inner membrane protein yccS LA331_08860 PF12823 Domain of unknown function (DUF3817) LA331_08865 PF07690 Major Facilitator Superfamily LA331_08880 PF01565 FAD binding domain LA331_08880 PF02913 FAD linked oxidases, C-terminal domain LA331_08885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA331_08885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA331_08890 PF00892 EamA-like transporter family LA331_08900 PF00892 EamA-like transporter family LA331_08910 PF01925 Sulfite exporter TauE/SafE LA331_08915 PF09157 Pseudouridine synthase II TruB, C-terminal LA331_08915 PF16198 tRNA pseudouridylate synthase B C-terminal domain LA331_08915 PF01509 TruB family pseudouridylate synthase (N terminal domain) LA331_08920 PF03280 Proteobacterial lipase chaperone protein LA331_08925 PF00561 alpha/beta hydrolase fold LA331_08930 PF00561 alpha/beta hydrolase fold LA331_08935 PF01245 Ribosomal protein L19 LA331_08940 PF01746 tRNA (Guanine-1)-methyltransferase LA331_08945 PF01782 RimM N-terminal domain LA331_08945 PF05239 PRC-barrel domain LA331_08950 PF00886 Ribosomal protein S16 LA331_08990 PF07963 Prokaryotic N-terminal methylation motif LA331_08990 PF00114 Pilin (bacterial filament) LA331_08995 PF02401 LytB protein LA331_09000 PF00625 Guanylate kinase LA331_09005 PF01192 RNA polymerase Rpb6 LA331_09010 PF02824 TGS domain LA331_09010 PF04607 Region found in RelA / SpoT proteins LA331_09010 PF13291 ACT domain LA331_09015 PF01042 Endoribonuclease L-PSP LA331_09020 PF04324 BFD-like [2Fe-2S] binding domain LA331_09025 PF00210 Ferritin-like domain LA331_09030 PF04932 O-Antigen ligase LA331_09030 PF15864 Protein glycosylation ligase LA331_09030 PF11846 Virulence factor membrane-bound polymerase, C-terminal LA331_09035 PF07963 Prokaryotic N-terminal methylation motif LA331_09035 PF00114 Pilin (bacterial filament) LA331_09055 PF04011 LemA family LA331_09060 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_09060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA331_09065 PF00310 Glutamine amidotransferases class-II LA331_09065 PF01645 Conserved region in glutamate synthase LA331_09065 PF04898 Glutamate synthase central domain LA331_09065 PF01493 GXGXG motif LA331_09075 PF01761 3-dehydroquinate synthase LA331_09080 PF01202 Shikimate kinase LA331_09085 PF07660 Secretin and TonB N terminus short domain LA331_09085 PF00263 Bacterial type II and III secretion system protein LA331_09085 PF11741 AMIN domain LA331_09085 PF03958 Bacterial type II/III secretion system short domain LA331_09095 PF04350 Pilus assembly protein, PilO LA331_09100 PF05137 Fimbrial assembly protein (PilN) LA331_09105 PF11104 Type IV pilus assembly protein PilM; LA331_09110 PF17092 Penicillin-binding protein OB-like domain LA331_09110 PF00912 Transglycosylase LA331_09110 PF00905 Penicillin binding protein transpeptidase domain LA331_09115 PF13847 Methyltransferase domain LA331_09120 PF00953 Glycosyl transferase family 4 LA331_09125 PF01225 Mur ligase family, catalytic domain LA331_09125 PF02875 Mur ligase family, glutamate ligase domain LA331_09125 PF08245 Mur ligase middle domain LA331_09130 PF01225 Mur ligase family, catalytic domain LA331_09130 PF02875 Mur ligase family, glutamate ligase domain LA331_09130 PF08245 Mur ligase middle domain LA331_09135 PF03717 Penicillin-binding Protein dimerisation domain LA331_09135 PF00905 Penicillin binding protein transpeptidase domain LA331_09145 PF01795 MraW methylase family LA331_09170 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA331_09195 PF00005 ABC transporter LA331_09195 PF12848 ABC transporter LA331_09200 PF01053 Cys/Met metabolism PLP-dependent enzyme LA331_09205 PF00106 short chain dehydrogenase LA331_09210 PF01502 Phosphoribosyl-AMP cyclohydrolase LA331_09225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LA331_09225 PF00361 Proton-conducting membrane transporter LA331_09225 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LA331_09225 PF13244 Domain of unknown function (DUF4040) LA331_09230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LA331_09235 PF00361 Proton-conducting membrane transporter LA331_09240 PF01899 Na+/H+ ion antiporter subunit LA331_09245 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LA331_09250 PF03334 Na+/H+ antiporter subunit LA331_09255 PF02033 Ribosome-binding factor A LA331_09260 PF00009 Elongation factor Tu GTP binding domain LA331_09260 PF11987 Translation-initiation factor 2 LA331_09260 PF04760 Translation initiation factor IF-2, N-terminal region LA331_09260 PF08364 Bacterial translation initiation factor IF-2 associated region LA331_09265 PF00575 S1 RNA binding domain LA331_09265 PF08529 NusA N-terminal domain LA331_09265 PF13184 NusA-like KH domain LA331_09270 PF02576 RimP N-terminal domain LA331_09270 PF17384 RimP C-terminal SH3 domain LA331_09300 PF03840 Preprotein translocase SecG subunit LA331_09305 PF00121 Triosephosphate isomerase LA331_09310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA331_09310 PF00437 Type II/IV secretion system protein LA331_09315 PF00482 Type II secretion system (T2SS), protein F LA331_09320 PF06750 Bacterial Peptidase A24 N-terminal domain LA331_09320 PF01478 Type IV leader peptidase family LA331_09325 PF01121 Dephospho-CoA kinase LA331_09335 PF00588 SpoU rRNA Methylase family LA331_09335 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA331_09340 PF06865 Pyrimidine/purine nucleoside phosphorylase LA331_09345 PF02463 RecF/RecN/SMC N terminal domain LA331_09355 PF02622 Uncharacterized ACR, COG1678 LA331_09360 PF03652 Holliday junction resolvase LA331_09370 PF00664 ABC transporter transmembrane region LA331_09370 PF00005 ABC transporter LA331_09385 PF00535 Glycosyl transferase family 2 LA331_09390 PF01895 PhoU domain LA331_09415 PF13667 ThiC-associated domain LA331_09415 PF01964 Radical SAM ThiC family LA331_09420 PF00293 NUDIX domain LA331_09425 PF00149 Calcineurin-like phosphoesterase LA331_09430 PF01258 Prokaryotic dksA/traR C4-type zinc finger LA331_09435 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA331_09445 PF01098 Cell cycle protein LA331_09450 PF08245 Mur ligase middle domain LA331_09450 PF02875 Mur ligase family, glutamate ligase domain LA331_09460 PF07670 Nucleoside recognition LA331_09460 PF02421 Ferrous iron transport protein B LA331_09460 PF07664 Ferrous iron transport protein B C terminus LA331_09470 PF00589 Phage integrase family LA331_09470 PF02899 Phage integrase, N-terminal SAM-like domain LA331_09475 PF13098 Thioredoxin-like domain LA331_09475 PF10411 Disulfide bond isomerase protein N-terminus LA331_09480 PF01842 ACT domain LA331_09480 PF00742 Homoserine dehydrogenase LA331_09480 PF03447 Homoserine dehydrogenase, NAD binding domain LA331_09485 PF00291 Pyridoxal-phosphate dependent enzyme LA331_09490 PF00768 D-alanyl-D-alanine carboxypeptidase LA331_09495 PF00072 Response regulator receiver domain LA331_09495 PF00196 Bacterial regulatory proteins, luxR family LA331_09500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_09500 PF00512 His Kinase A (phospho-acceptor) domain LA331_09500 PF07689 KaiB domain LA331_09505 PF00158 Sigma-54 interaction domain LA331_09505 PF00072 Response regulator receiver domain LA331_09505 PF02954 Bacterial regulatory protein, Fis family LA331_09510 PF00595 PDZ domain LA331_09510 PF03572 Peptidase family S41 LA331_09515 PF01676 Metalloenzyme superfamily LA331_09515 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LA331_09520 PF03739 Lipopolysaccharide export system permease LptF/LptG LA331_09525 PF03739 Lipopolysaccharide export system permease LptF/LptG LA331_09530 PF02789 Cytosol aminopeptidase family, N-terminal domain LA331_09530 PF00883 Cytosol aminopeptidase family, catalytic domain LA331_09545 PF09335 SNARE associated Golgi protein LA331_09550 PF00677 Lumazine binding domain LA331_09560 PF01872 RibD C-terminal domain LA331_09560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA331_09565 PF03477 ATP cone domain LA331_09570 PF00909 Ammonium Transporter Family LA331_09575 PF00543 Nitrogen regulatory protein P-II LA331_09585 PF13335 Magnesium chelatase, subunit ChlI C-terminal LA331_09585 PF01078 Magnesium chelatase, subunit ChlI LA331_09600 PF00719 Inorganic pyrophosphatase LA331_09615 PF13193 AMP-binding enzyme C-terminal domain LA331_09615 PF00501 AMP-binding enzyme LA331_09620 PF00521 DNA gyrase/topoisomerase IV, subunit A LA331_09620 PF03989 DNA gyrase C-terminal domain, beta-propeller LA331_09625 PF07690 Major Facilitator Superfamily LA331_09630 PF03458 UPF0126 domain LA331_09635 PF02810 SEC-C motif LA331_09640 PF03741 Integral membrane protein TerC family LA331_09640 PF03471 Transporter associated domain LA331_09645 PF03641 Possible lysine decarboxylase LA331_09655 PF07690 Major Facilitator Superfamily LA331_09665 PF00817 impB/mucB/samB family LA331_09665 PF11799 impB/mucB/samB family C-terminal domain LA331_09665 PF11798 IMS family HHH motif LA331_09670 PF07690 Major Facilitator Superfamily LA331_09670 PF00083 Sugar (and other) transporter LA331_09685 PF11842 Domain of unknown function (DUF3362) LA331_09685 PF04055 Radical SAM superfamily LA331_09685 PF08497 Radical SAM N-terminal LA331_09690 PF07690 Major Facilitator Superfamily LA331_09730 PF01327 Polypeptide deformylase LA331_09745 PF01300 Telomere recombination LA331_09750 PF00892 EamA-like transporter family LA331_09755 PF00255 Glutathione peroxidase LA331_09775 PF00171 Aldehyde dehydrogenase family LA331_09790 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LA331_09795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA331_09795 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA331_09800 PF00231 ATP synthase LA331_09805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA331_09805 PF00306 ATP synthase alpha/beta chain, C terminal domain LA331_09805 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA331_09810 PF00213 ATP synthase delta (OSCP) subunit LA331_09815 PF00430 ATP synthase B/B' CF(0) LA331_09820 PF00137 ATP synthase subunit C LA331_09825 PF00119 ATP synthase A chain LA331_09845 PF00005 ABC transporter LA331_09850 PF00950 ABC 3 transport family LA331_09855 PF04463 Protein of unknown function (DUF523) LA331_09860 PF01810 LysE type translocator LA331_09865 PF04261 Dyp-type peroxidase family LA331_09875 PF01476 LysM domain LA331_09875 PF00877 NlpC/P60 family LA331_09875 PF08239 Bacterial SH3 domain LA331_09880 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LA331_09880 PF13296 Putative type VI secretion system Rhs element Vgr LA331_09880 PF04717 Type VI secretion system, phage-baseplate injector LA331_09885 PF00155 Aminotransferase class I and II LA331_09890 PF01554 MatE LA331_09895 PF00296 Luciferase-like monooxygenase LA331_09900 PF00296 Luciferase-like monooxygenase LA331_09910 PF00106 short chain dehydrogenase LA331_09920 PF00072 Response regulator receiver domain LA331_09920 PF00486 Transcriptional regulatory protein, C terminal LA331_09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_09925 PF00512 His Kinase A (phospho-acceptor) domain LA331_09925 PF11808 Phosphate regulon sensor protein PhoR LA331_09925 PF00989 PAS fold LA331_09940 PF02678 Pirin LA331_09940 PF05726 Pirin C-terminal cupin domain LA331_09945 PF00990 Diguanylate cyclase, GGDEF domain LA331_09945 PF17158 Membrane-associated sensor, integral membrane domain LA331_09950 PF00990 Diguanylate cyclase, GGDEF domain LA331_09955 PF14338 Mrr N-terminal domain LA331_09955 PF04471 Restriction endonuclease LA331_09960 PF02540 NAD synthase LA331_09960 PF00958 GMP synthase C terminal domain LA331_09960 PF00117 Glutamine amidotransferase class-I LA331_09965 PF09335 SNARE associated Golgi protein LA331_09980 PF13614 AAA domain LA331_10025 PF07120 Protein of unknown function (DUF1376) LA331_10035 PF00296 Luciferase-like monooxygenase LA331_10050 PF00199 Catalase LA331_10115 PF13657 HipA N-terminal domain LA331_10115 PF07804 HipA-like C-terminal domain LA331_10120 PF12419 SNF2 Helicase protein LA331_10120 PF00271 Helicase conserved C-terminal domain LA331_10120 PF00176 SNF2 family N-terminal domain LA331_10130 PF02378 Phosphotransferase system, EIIC LA331_10130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA331_10135 PF00294 pfkB family carbohydrate kinase LA331_10140 PF05524 PEP-utilising enzyme, N-terminal LA331_10140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA331_10140 PF00381 PTS HPr component phosphorylation site LA331_10140 PF02896 PEP-utilising enzyme, TIM barrel domain LA331_10140 PF00391 PEP-utilising enzyme, mobile domain LA331_10150 PF11799 impB/mucB/samB family C-terminal domain LA331_10150 PF00817 impB/mucB/samB family LA331_10150 PF13438 Domain of unknown function (DUF4113) LA331_10160 PF00149 Calcineurin-like phosphoesterase LA331_10160 PF02872 5'-nucleotidase, C-terminal domain LA331_10170 PF13089 Polyphosphate kinase N-terminal domain LA331_10170 PF02503 Polyphosphate kinase middle domain LA331_10170 PF13090 Polyphosphate kinase C-terminal domain 2 LA331_10170 PF17941 Polyphosphate kinase C-terminal domain 1 LA331_10175 PF09423 PhoD-like phosphatase LA331_10175 PF16655 PhoD-like phosphatase, N-terminal domain LA331_10195 PF09905 DNA-binding protein VF530 LA331_10200 PF03641 Possible lysine decarboxylase LA331_10210 PF00171 Aldehyde dehydrogenase family LA331_10215 PF00925 GTP cyclohydrolase II LA331_10215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LA331_10220 PF00885 6,7-dimethyl-8-ribityllumazine synthase LA331_10225 PF01029 NusB family LA331_10230 PF00586 AIR synthase related protein, N-terminal domain LA331_10230 PF02769 AIR synthase related protein, C-terminal domain LA331_10235 PF04608 Phosphatidylglycerophosphatase A LA331_10240 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_10240 PF14602 Hexapeptide repeat of succinyl-transferase LA331_10240 PF12804 MobA-like NTP transferase domain LA331_10245 PF01380 SIS domain LA331_10250 PF08722 TnsA endonuclease N terminal LA331_10250 PF08721 TnsA endonuclease C terminal LA331_10255 PF00665 Integrase core domain LA331_10260 PF11426 Tn7 transposition regulator TnsC LA331_10260 PF13401 AAA domain LA331_10265 PF15978 Tn7-like transposition protein D LA331_10265 PF06527 TniQ LA331_10275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA331_10275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA331_10275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA331_10275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA331_10280 PF16363 GDP-mannose 4,6 dehydratase LA331_10285 PF00342 Phosphoglucose isomerase LA331_10290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LA331_10290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LA331_10290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LA331_10295 PF00483 Nucleotidyl transferase LA331_10300 PF02719 Polysaccharide biosynthesis protein LA331_10305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA331_10310 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_10310 PF14602 Hexapeptide repeat of succinyl-transferase LA331_10310 PF17836 PglD N-terminal domain LA331_10315 PF02397 Bacterial sugar transferase LA331_10320 PF13477 Glycosyl transferase 4-like LA331_10320 PF00534 Glycosyl transferases group 1 LA331_10325 PF00535 Glycosyl transferase family 2 LA331_10330 PF00534 Glycosyl transferases group 1 LA331_10345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LA331_10345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LA331_10345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LA331_10350 PF02563 Polysaccharide biosynthesis/export protein LA331_10350 PF10531 SLBB domain LA331_10350 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LA331_10355 PF01451 Low molecular weight phosphotyrosine protein phosphatase LA331_10360 PF13807 G-rich domain on putative tyrosine kinase LA331_10360 PF02706 Chain length determinant protein LA331_10360 PF13614 AAA domain LA331_10370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA331_10370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA331_10375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA331_10375 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA331_10390 PF10576 Iron-sulfur binding domain of endonuclease III LA331_10390 PF00633 Helix-hairpin-helix motif LA331_10390 PF00730 HhH-GPD superfamily base excision DNA repair protein LA331_10390 PF14815 NUDIX domain LA331_10395 PF01551 Peptidase family M23 LA331_10405 PF03352 Methyladenine glycosylase LA331_10410 PF08240 Alcohol dehydrogenase GroES-like domain LA331_10410 PF00107 Zinc-binding dehydrogenase LA331_10415 PF03466 LysR substrate binding domain LA331_10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_10420 PF00248 Aldo/keto reductase family LA331_10425 PF07690 Major Facilitator Superfamily LA331_10435 PF05173 Dihydrodipicolinate reductase, C-terminus LA331_10435 PF01113 Dihydrodipicolinate reductase, N-terminus LA331_10460 PF00226 DnaJ domain LA331_10460 PF01556 DnaJ C terminal domain LA331_10460 PF00684 DnaJ central domain LA331_10475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA331_10480 PF00440 Bacterial regulatory proteins, tetR family LA331_10485 PF00311 Phosphoenolpyruvate carboxylase LA331_10490 PF00860 Permease family LA331_10495 PF03466 LysR substrate binding domain LA331_10495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_10515 PF00920 Dehydratase family LA331_10525 PF00920 Dehydratase family LA331_10530 PF02911 Formyl transferase, C-terminal domain LA331_10530 PF00551 Formyl transferase LA331_10535 PF01189 16S rRNA methyltransferase RsmB/F LA331_10535 PF01029 NusB family LA331_10540 PF02535 ZIP Zinc transporter LA331_10550 PF00209 Sodium:neurotransmitter symporter family LA331_10555 PF00171 Aldehyde dehydrogenase family LA331_10565 PF01965 DJ-1/PfpI family LA331_10570 PF12796 Ankyrin repeats (3 copies) LA331_10585 PF07690 Major Facilitator Superfamily LA331_10590 PF07690 Major Facilitator Superfamily LA331_10620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA331_10630 PF07859 alpha/beta hydrolase fold LA331_10640 PF01025 GrpE LA331_10645 PF00012 Hsp70 protein LA331_10665 PF01521 Iron-sulphur cluster biosynthesis LA331_10685 PF00005 ABC transporter LA331_10685 PF12848 ABC transporter LA331_10690 PF08240 Alcohol dehydrogenase GroES-like domain LA331_10690 PF13823 Alcohol dehydrogenase GroES-associated LA331_10690 PF00107 Zinc-binding dehydrogenase LA331_10700 PF00204 DNA gyrase B LA331_10700 PF00986 DNA gyrase B subunit, carboxyl terminus LA331_10700 PF18053 DNA gyrase B subunit insert domain LA331_10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_10700 PF01751 Toprim domain LA331_10705 PF02463 RecF/RecN/SMC N terminal domain LA331_10710 PF02767 DNA polymerase III beta subunit, central domain LA331_10710 PF02768 DNA polymerase III beta subunit, C-terminal domain LA331_10710 PF00712 DNA polymerase III beta subunit, N-terminal domain LA331_10715 PF11638 DnaA N-terminal domain LA331_10715 PF08299 Bacterial dnaA protein helix-turn-helix LA331_10715 PF00308 Bacterial dnaA protein LA331_10720 PF00468 Ribosomal protein L34 LA331_10725 PF00825 Ribonuclease P LA331_10730 PF01809 Putative membrane protein insertion efficiency factor LA331_10735 PF02096 60Kd inner membrane protein LA331_10735 PF14849 YidC periplasmic domain LA331_10740 PF01926 50S ribosome-binding GTPase LA331_10740 PF12631 MnmE helical domain LA331_10740 PF10396 GTP-binding protein TrmE N-terminus LA331_10745 PF13356 Arm DNA-binding domain LA331_10745 PF14659 Phage integrase, N-terminal SAM-like domain LA331_10745 PF00589 Phage integrase family LA331_10775 PF13613 Helix-turn-helix of DDE superfamily endonuclease LA331_10775 PF13359 DDE superfamily endonuclease LA331_10810 PF03050 Transposase IS66 family LA331_10810 PF13007 Transposase C of IS166 homeodomain LA331_10810 PF13005 zinc-finger binding domain of transposase IS66 LA331_10810 PF13817 IS66 C-terminal element LA331_10830 PF07690 Major Facilitator Superfamily LA331_10835 PF02583 Metal-sensitive transcriptional repressor LA331_10845 PF12323 Helix-turn-helix domain LA331_10845 PF07282 Putative transposase DNA-binding domain LA331_10845 PF01385 Probable transposase LA331_10855 PF10411 Disulfide bond isomerase protein N-terminus LA331_10855 PF13098 Thioredoxin-like domain LA331_10865 PF00156 Phosphoribosyl transferase domain LA331_10870 PF01979 Amidohydrolase family LA331_10875 PF03741 Integral membrane protein TerC family LA331_10880 PF07690 Major Facilitator Superfamily LA331_10915 PF13823 Alcohol dehydrogenase GroES-associated LA331_10915 PF00107 Zinc-binding dehydrogenase LA331_10915 PF08240 Alcohol dehydrogenase GroES-like domain LA331_10925 PF08245 Mur ligase middle domain LA331_10925 PF02875 Mur ligase family, glutamate ligase domain LA331_10925 PF01225 Mur ligase family, catalytic domain LA331_10935 PF00731 AIR carboxylase LA331_10940 PF02222 ATP-grasp domain LA331_10940 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LA331_10945 PF13406 Transglycosylase SLT domain LA331_10950 PF03702 Anhydro-N-acetylmuramic acid kinase LA331_10955 PF00579 tRNA synthetases class I (W and Y) LA331_11000 PF00360 Phytochrome region LA331_11000 PF00990 Diguanylate cyclase, GGDEF domain LA331_11000 PF01590 GAF domain LA331_11000 PF00563 EAL domain LA331_11005 PF07995 Glucose / Sorbosone dehydrogenase LA331_11025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA331_11030 PF01252 Signal peptidase (SPase) II LA331_11035 PF06827 Zinc finger found in FPG and IleRS LA331_11035 PF00133 tRNA synthetases class I (I, L, M and V) LA331_11035 PF08264 Anticodon-binding domain of tRNA LA331_11040 PF01687 Riboflavin kinase LA331_11040 PF06574 FAD synthetase LA331_11050 PF08362 YcdC-like protein, C-terminal region LA331_11050 PF00440 Bacterial regulatory proteins, tetR family LA331_11055 PF00005 ABC transporter LA331_11060 PF00528 Binding-protein-dependent transport system inner membrane component LA331_11065 PF00296 Luciferase-like monooxygenase LA331_11070 PF09084 NMT1/THI5 like LA331_11075 PF09084 NMT1/THI5 like LA331_11080 PF00696 Amino acid kinase family LA331_11080 PF00583 Acetyltransferase (GNAT) family LA331_11110 PF00106 short chain dehydrogenase LA331_11115 PF13419 Haloacid dehalogenase-like hydrolase LA331_11125 PF01323 DSBA-like thioredoxin domain LA331_11130 PF00440 Bacterial regulatory proteins, tetR family LA331_11135 PF03725 3' exoribonuclease family, domain 2 LA331_11135 PF01138 3' exoribonuclease family, domain 1 LA331_11140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LA331_11140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LA331_11145 PF01510 N-acetylmuramoyl-L-alanine amidase LA331_11150 PF03023 Lipid II flippase MurJ LA331_11155 PF07043 Protein of unknown function (DUF1328) LA331_11160 PF03692 Putative zinc- or iron-chelating domain LA331_11165 PF00563 EAL domain LA331_11165 PF00990 Diguanylate cyclase, GGDEF domain LA331_11165 PF03707 Bacterial signalling protein N terminal repeat LA331_11165 PF13188 PAS domain LA331_11170 PF16193 AAA C-terminal domain LA331_11170 PF12002 MgsA AAA+ ATPase C terminal LA331_11170 PF00004 ATPase family associated with various cellular activities (AAA) LA331_11175 PF01259 SAICAR synthetase LA331_11185 PF00701 Dihydrodipicolinate synthetase family LA331_11195 PF00857 Isochorismatase family LA331_11200 PF01758 Sodium Bile acid symporter family LA331_11205 PF02503 Polyphosphate kinase middle domain LA331_11205 PF13090 Polyphosphate kinase C-terminal domain 2 LA331_11205 PF17941 Polyphosphate kinase C-terminal domain 1 LA331_11205 PF13089 Polyphosphate kinase N-terminal domain LA331_11230 PF02580 D-Tyr-tRNA(Tyr) deacylase LA331_11235 PF06628 Catalase-related immune-responsive LA331_11235 PF00199 Catalase LA331_11245 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LA331_11245 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LA331_11250 PF00581 Rhodanese-like domain LA331_11255 PF02666 Phosphatidylserine decarboxylase LA331_11265 PF03485 Arginyl tRNA synthetase N terminal domain LA331_11265 PF05746 DALR anticodon binding domain LA331_11265 PF00750 tRNA synthetases class I (R) LA331_11275 PF04286 Protein of unknown function (DUF445) LA331_11290 PF04262 Glutamate-cysteine ligase LA331_11295 PF02600 Disulfide bond formation protein DsbB LA331_11305 PF05728 Uncharacterised protein family (UPF0227) LA331_11310 PF01751 Toprim domain LA331_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_11310 PF00204 DNA gyrase B LA331_11310 PF00986 DNA gyrase B subunit, carboxyl terminus LA331_11350 PF11412 Disulphide bond corrector protein DsbC LA331_11350 PF02683 Cytochrome C biogenesis protein transmembrane region LA331_11355 PF00990 Diguanylate cyclase, GGDEF domain LA331_11355 PF07694 5TMR of 5TMR-LYT LA331_11365 PF02525 Flavodoxin-like fold LA331_11370 PF07859 alpha/beta hydrolase fold LA331_11385 PF03372 Endonuclease/Exonuclease/phosphatase family LA331_11390 PF00156 Phosphoribosyl transferase domain LA331_11395 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_11410 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LA331_11410 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LA331_11420 PF04101 Glycosyltransferase family 28 C-terminal domain LA331_11420 PF03033 Glycosyltransferase family 28 N-terminal domain LA331_11425 PF01225 Mur ligase family, catalytic domain LA331_11425 PF02875 Mur ligase family, glutamate ligase domain LA331_11425 PF08245 Mur ligase middle domain LA331_11430 PF07478 D-ala D-ala ligase C-terminus LA331_11430 PF01820 D-ala D-ala ligase N-terminus LA331_11435 PF08478 POTRA domain, FtsQ-type LA331_11435 PF03799 Cell division protein FtsQ LA331_11440 PF02491 SHS2 domain inserted in FTSA LA331_11445 PF00091 Tubulin/FtsZ family, GTPase domain LA331_11445 PF12327 FtsZ family, C-terminal domain LA331_11450 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LA331_11465 PF00456 Transketolase, thiamine diphosphate binding domain LA331_11465 PF17831 Pyruvate dehydrogenase E1 component middle domain LA331_11470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA331_11470 PF02817 e3 binding domain LA331_11470 PF00364 Biotin-requiring enzyme LA331_11475 PF01169 Uncharacterized protein family UPF0016 LA331_11480 PF01613 Flavin reductase like domain LA331_11480 PF00258 Flavodoxin LA331_11485 PF03692 Putative zinc- or iron-chelating domain LA331_11490 PF00571 CBS domain LA331_11490 PF00478 IMP dehydrogenase / GMP reductase domain LA331_11495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA331_11495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA331_11495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA331_11495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA331_11500 PF01243 Pyridoxamine 5'-phosphate oxidase LA331_11500 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LA331_11505 PF17768 RecJ OB domain LA331_11505 PF02272 DHHA1 domain LA331_11505 PF01368 DHH family LA331_11530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA331_11535 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LA331_11540 PF04452 RNA methyltransferase LA331_11545 PF00924 Mechanosensitive ion channel LA331_11545 PF05552 Conserved TM helix LA331_11555 PF16177 Acetyl-coenzyme A synthetase N-terminus LA331_11555 PF00501 AMP-binding enzyme LA331_11555 PF13193 AMP-binding enzyme C-terminal domain LA331_11560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LA331_11560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_11565 PF00875 DNA photolyase LA331_11565 PF03441 FAD binding domain of DNA photolyase LA331_11570 PF00677 Lumazine binding domain LA331_11575 PF00296 Luciferase-like monooxygenase LA331_11580 PF03358 NADPH-dependent FMN reductase LA331_11585 PF00072 Response regulator receiver domain LA331_11585 PF00196 Bacterial regulatory proteins, luxR family LA331_11595 PF01627 Hpt domain LA331_11595 PF00072 Response regulator receiver domain LA331_11595 PF00512 His Kinase A (phospho-acceptor) domain LA331_11595 PF00672 HAMP domain LA331_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_11600 PF04341 Protein of unknown function, DUF485 LA331_11605 PF00474 Sodium:solute symporter family LA331_11615 PF02028 BCCT, betaine/carnitine/choline family transporter LA331_11625 PF00990 Diguanylate cyclase, GGDEF domain LA331_11625 PF07694 5TMR of 5TMR-LYT LA331_11630 PF01230 HIT domain LA331_11635 PF17755 UvrA DNA-binding domain LA331_11635 PF17760 UvrA interaction domain LA331_11640 PF02581 Thiamine monophosphate synthase LA331_11640 PF08543 Phosphomethylpyrimidine kinase LA331_11640 PF03070 TENA/THI-4/PQQC family LA331_11650 PF07690 Major Facilitator Superfamily LA331_11655 PF00436 Single-strand binding protein family LA331_11670 PF00578 AhpC/TSA family LA331_11670 PF10417 C-terminal domain of 1-Cys peroxiredoxin LA331_11675 PF02678 Pirin LA331_11675 PF05726 Pirin C-terminal cupin domain LA331_11710 PF02705 K+ potassium transporter LA331_11740 PF00977 Histidine biosynthesis protein LA331_11745 PF01636 Phosphotransferase enzyme family LA331_11765 PF00977 Histidine biosynthesis protein LA331_11775 PF00117 Glutamine amidotransferase class-I LA331_11780 PF00475 Imidazoleglycerol-phosphate dehydratase LA331_11815 PF03848 Tellurite resistance protein TehB LA331_11815 PF09313 Domain of unknown function (DUF1971) LA331_11830 PF13359 DDE superfamily endonuclease LA331_11830 PF13613 Helix-turn-helix of DDE superfamily endonuclease LA331_11845 PF02803 Thiolase, C-terminal domain LA331_11845 PF00108 Thiolase, N-terminal domain LA331_11850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA331_11850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA331_11850 PF00378 Enoyl-CoA hydratase/isomerase LA331_11870 PF01541 GIY-YIG catalytic domain LA331_11870 PF08459 UvrC Helix-hairpin-helix N-terminal LA331_11870 PF02151 UvrB/uvrC motif LA331_11880 PF01066 CDP-alcohol phosphatidyltransferase LA331_11885 PF04362 Bacterial Fe(2+) trafficking LA331_11890 PF00206 Lyase LA331_11890 PF14698 Argininosuccinate lyase C-terminal LA331_11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_11895 PF06580 Histidine kinase LA331_11895 PF07694 5TMR of 5TMR-LYT LA331_11900 PF04397 LytTr DNA-binding domain LA331_11900 PF00072 Response regulator receiver domain LA331_11905 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LA331_11905 PF03900 Porphobilinogen deaminase, C-terminal domain LA331_11925 PF03061 Thioesterase superfamily LA331_11930 PF00816 H-NS histone family LA331_11945 PF00263 Bacterial type II and III secretion system protein LA331_11945 PF03958 Bacterial type II/III secretion system short domain LA331_11950 PF16697 Inner membrane component of T3SS, cytoplasmic domain LA331_11955 PF13419 Haloacid dehalogenase-like hydrolase LA331_11960 PF00425 chorismate binding enzyme LA331_11960 PF04715 Anthranilate synthase component I, N terminal region LA331_11985 PF03143 Elongation factor Tu C-terminal domain LA331_11985 PF03144 Elongation factor Tu domain 2 LA331_11985 PF00009 Elongation factor Tu GTP binding domain LA331_11995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LA331_12000 PF02357 Transcription termination factor nusG LA331_12000 PF00467 KOW motif LA331_12005 PF00298 Ribosomal protein L11, RNA binding domain LA331_12005 PF03946 Ribosomal protein L11, N-terminal domain LA331_12010 PF00687 Ribosomal protein L1p/L10e family LA331_12015 PF00466 Ribosomal protein L10 LA331_12020 PF00542 Ribosomal protein L7/L12 C-terminal domain LA331_12020 PF16320 Ribosomal protein L7/L12 dimerisation domain LA331_12030 PF04563 RNA polymerase beta subunit LA331_12030 PF04561 RNA polymerase Rpb2, domain 2 LA331_12030 PF04565 RNA polymerase Rpb2, domain 3 LA331_12030 PF10385 RNA polymerase beta subunit external 1 domain LA331_12030 PF00562 RNA polymerase Rpb2, domain 6 LA331_12030 PF04560 RNA polymerase Rpb2, domain 7 LA331_12035 PF04998 RNA polymerase Rpb1, domain 5 LA331_12035 PF04997 RNA polymerase Rpb1, domain 1 LA331_12035 PF00623 RNA polymerase Rpb1, domain 2 LA331_12035 PF04983 RNA polymerase Rpb1, domain 3 LA331_12035 PF05000 RNA polymerase Rpb1, domain 4 LA331_12055 PF13726 Na+-H+ antiporter family LA331_12055 PF03553 Na+/H+ antiporter family LA331_12060 PF03922 OmpW family LA331_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_12070 PF00183 Hsp90 protein LA331_12105 PF01323 DSBA-like thioredoxin domain LA331_12110 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LA331_12110 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LA331_12115 PF00672 HAMP domain LA331_12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_12115 PF00512 His Kinase A (phospho-acceptor) domain LA331_12120 PF00072 Response regulator receiver domain LA331_12120 PF00486 Transcriptional regulatory protein, C terminal LA331_12125 PF16921 Tex protein YqgF-like domain LA331_12125 PF09371 Tex-like protein N-terminal domain LA331_12125 PF00575 S1 RNA binding domain LA331_12125 PF17674 HHH domain LA331_12145 PF03109 ABC1 family LA331_12155 PF01209 ubiE/COQ5 methyltransferase family LA331_12165 PF03976 Polyphosphate kinase 2 (PPK2) LA331_12175 PF17946 RecC C-terminal domain LA331_12180 PF12705 PD-(D/E)XK nuclease superfamily LA331_12180 PF00580 UvrD/REP helicase N-terminal domain LA331_12180 PF13361 UvrD-like helicase C-terminal domain LA331_12185 PF13538 UvrD-like helicase C-terminal domain LA331_12190 PF00312 Ribosomal protein S15 LA331_12195 PF03725 3' exoribonuclease family, domain 2 LA331_12195 PF01138 3' exoribonuclease family, domain 1 LA331_12195 PF00575 S1 RNA binding domain LA331_12195 PF00013 KH domain LA331_12195 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LA331_12200 PF04325 Protein of unknown function (DUF465) LA331_12225 PF01430 Hsp33 protein LA331_12230 PF00999 Sodium/hydrogen exchanger family LA331_12230 PF02254 TrkA-N domain LA331_12235 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LA331_12235 PF00270 DEAD/DEAH box helicase LA331_12235 PF00271 Helicase conserved C-terminal domain LA331_12235 PF17764 3′ DNA-binding domain (3′BD) LA331_12235 PF18074 Primosomal protein N C-terminal domain LA331_12240 PF00482 Type II secretion system (T2SS), protein F LA331_12245 PF08334 Type II secretion system (T2SS), protein G LA331_12245 PF07963 Prokaryotic N-terminal methylation motif LA331_12255 PF00795 Carbon-nitrogen hydrolase LA331_12260 PF00571 CBS domain LA331_12260 PF03471 Transporter associated domain LA331_12265 PF01206 Sulfurtransferase TusA LA331_12270 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LA331_12270 PF04717 Type VI secretion system, phage-baseplate injector LA331_12270 PF13296 Putative type VI secretion system Rhs element Vgr LA331_12295 PF01177 Asp/Glu/Hydantoin racemase LA331_12305 PF00762 Ferrochelatase LA331_12310 PF00753 Metallo-beta-lactamase superfamily LA331_12320 PF03884 DNA gyrase inhibitor YacG LA331_12330 PF01494 FAD binding domain LA331_12340 PF08241 Methyltransferase domain LA331_12355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA331_12355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA331_12380 PF05746 DALR anticodon binding domain LA331_12380 PF02092 Glycyl-tRNA synthetase beta subunit LA331_12385 PF02091 Glycyl-tRNA synthetase alpha subunit LA331_12395 PF00571 CBS domain LA331_12395 PF01743 Poly A polymerase head domain LA331_12400 PF00939 Sodium:sulfate symporter transmembrane region LA331_12410 PF04024 PspC domain LA331_12435 PF13193 AMP-binding enzyme C-terminal domain LA331_12435 PF00501 AMP-binding enzyme LA331_12440 PF12111 Polyribonucleotide phosphorylase C terminal LA331_12440 PF10150 Ribonuclease E/G family LA331_12440 PF00575 S1 RNA binding domain LA331_12445 PF00849 RNA pseudouridylate synthase LA331_12445 PF01479 S4 domain LA331_12450 PF13419 Haloacid dehalogenase-like hydrolase LA331_12455 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA331_12460 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA331_12460 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LA331_12465 PF00682 HMGL-like LA331_12465 PF07836 DmpG-like communication domain LA331_12470 PF03573 outer membrane porin, OprD family LA331_12475 PF00561 alpha/beta hydrolase fold LA331_12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_12480 PF03466 LysR substrate binding domain LA331_12485 PF00355 Rieske [2Fe-2S] domain LA331_12485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LA331_12490 PF00866 Ring hydroxylating beta subunit LA331_12495 PF00355 Rieske [2Fe-2S] domain LA331_12500 PF00106 short chain dehydrogenase LA331_12505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LA331_12510 PF14759 Reductase C-terminal LA331_12510 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_12525 PF01545 Cation efflux family LA331_12525 PF16916 Dimerisation domain of Zinc Transporter LA331_12530 PF12706 Beta-lactamase superfamily domain LA331_12550 PF00199 Catalase LA331_12550 PF06628 Catalase-related immune-responsive LA331_12565 PF00391 PEP-utilising enzyme, mobile domain LA331_12565 PF02896 PEP-utilising enzyme, TIM barrel domain LA331_12565 PF01590 GAF domain LA331_12565 PF05524 PEP-utilising enzyme, N-terminal LA331_12570 PF00293 NUDIX domain LA331_12590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_12590 PF03466 LysR substrate binding domain LA331_12600 PF00330 Aconitase family (aconitate hydratase) LA331_12605 PF00694 Aconitase C-terminal domain LA331_12615 PF00180 Isocitrate/isopropylmalate dehydrogenase LA331_12635 PF01176 Translation initiation factor 1A / IF-1 LA331_12645 PF01416 tRNA pseudouridine synthase LA331_12665 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA331_12665 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA331_12680 PF03279 Bacterial lipid A biosynthesis acyltransferase LA331_12685 PF00005 ABC transporter LA331_12685 PF16326 ABC transporter C-terminal domain LA331_12685 PF12848 ABC transporter LA331_12690 PF04102 SlyX LA331_12710 PF01396 Topoisomerase DNA binding C4 zinc finger LA331_12710 PF08272 Topoisomerase I zinc-ribbon-like LA331_12710 PF01131 DNA topoisomerase LA331_12710 PF01751 Toprim domain LA331_12730 PF02595 Glycerate kinase family LA331_12735 PF13361 UvrD-like helicase C-terminal domain LA331_12735 PF00580 UvrD/REP helicase N-terminal domain LA331_12740 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LA331_12755 PF00999 Sodium/hydrogen exchanger family LA331_12755 PF02254 TrkA-N domain LA331_12760 PF00471 Ribosomal protein L33 LA331_12765 PF00830 Ribosomal L28 family LA331_12770 PF00171 Aldehyde dehydrogenase family LA331_12775 PF00440 Bacterial regulatory proteins, tetR family LA331_12775 PF08360 QacR-like protein, C-terminal region LA331_12780 PF00551 Formyl transferase LA331_12780 PF01842 ACT domain LA331_12790 PF01618 MotA/TolQ/ExbB proton channel family LA331_12800 PF01625 Peptide methionine sulfoxide reductase LA331_12815 PF00186 Dihydrofolate reductase LA331_12850 PF01048 Phosphorylase superfamily LA331_12855 PF00303 Thymidylate synthase LA331_12860 PF13007 Transposase C of IS166 homeodomain LA331_12860 PF03050 Transposase IS66 family LA331_12860 PF13005 zinc-finger binding domain of transposase IS66 LA331_12860 PF13817 IS66 C-terminal element LA331_12890 PF02899 Phage integrase, N-terminal SAM-like domain LA331_12890 PF00589 Phage integrase family LA331_12900 PF08212 Lipocalin-like domain LA331_12920 PF01790 Prolipoprotein diacylglyceryl transferase LA331_12935 PF01725 Ham1 family LA331_12950 PF00561 alpha/beta hydrolase fold LA331_12950 PF07021 Methionine biosynthesis protein MetW LA331_12955 PF00561 alpha/beta hydrolase fold LA331_12960 PF00682 HMGL-like LA331_12960 PF08502 LeuA allosteric (dimerisation) domain LA331_12965 PF13640 2OG-Fe(II) oxygenase superfamily LA331_12965 PF18331 PKHD-type hydroxylase C-terminal domain LA331_12970 PF07715 TonB-dependent Receptor Plug Domain LA331_12970 PF00593 TonB dependent receptor LA331_12975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA331_12975 PF05698 Bacterial trigger factor protein (TF) C-terminus LA331_12975 PF05697 Bacterial trigger factor protein (TF) LA331_12980 PF00574 Clp protease LA331_12985 PF07724 AAA domain (Cdc48 subfamily) LA331_12985 PF10431 C-terminal, D2-small domain, of ClpB protein LA331_12985 PF06689 ClpX C4-type zinc finger LA331_12995 PF05683 Fumarase C-terminus LA331_12995 PF05681 Fumarate hydratase (Fumerase) LA331_13005 PF07085 DRTGG domain LA331_13005 PF01515 Phosphate acetyl/butaryl transferase LA331_13010 PF00871 Acetokinase family LA331_13015 PF00171 Aldehyde dehydrogenase family LA331_13030 PF00933 Glycosyl hydrolase family 3 N terminal domain LA331_13035 PF11818 C-terminal domain of tail specific protease (DUF3340) LA331_13035 PF00595 PDZ domain LA331_13035 PF03572 Peptidase family S41 LA331_13035 PF17804 Tail specific protease N-terminal domain LA331_13040 PF00563 EAL domain LA331_13040 PF00990 Diguanylate cyclase, GGDEF domain LA331_13040 PF03707 Bacterial signalling protein N terminal repeat LA331_13060 PF13737 Transposase DDE domain LA331_13075 PF13784 Fic/DOC family N-terminal LA331_13075 PF02661 Fic/DOC family LA331_13080 PF16658 Class II release factor RF3, C-terminal domain LA331_13080 PF03144 Elongation factor Tu domain 2 LA331_13080 PF00009 Elongation factor Tu GTP binding domain LA331_13095 PF01026 TatD related DNase LA331_13110 PF02556 Preprotein translocase subunit SecB LA331_13115 PF00462 Glutaredoxin LA331_13125 PF03193 RsgA GTPase LA331_13130 PF00929 Exonuclease LA331_13140 PF00899 ThiF family LA331_13150 PF02321 Outer membrane efflux protein LA331_13155 PF00005 ABC transporter LA331_13155 PF02687 FtsX-like permease family LA331_13155 PF12704 MacB-like periplasmic core domain LA331_13160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA331_13165 PF01814 Hemerythrin HHE cation binding domain LA331_13180 PF13603 Leucyl-tRNA synthetase, Domain 2 LA331_13180 PF09334 tRNA synthetases class I (M) LA331_13180 PF08264 Anticodon-binding domain of tRNA LA331_13180 PF00133 tRNA synthetases class I (I, L, M and V) LA331_13190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA331_13190 PF00205 Thiamine pyrophosphate enzyme, central domain LA331_13190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA331_13195 PF10369 Small subunit of acetolactate synthase LA331_13200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LA331_13200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LA331_13205 PF01569 PAP2 superfamily LA331_13210 PF04384 Iron-sulphur cluster assembly LA331_13215 PF00334 Nucleoside diphosphate kinase LA331_13220 PF04055 Radical SAM superfamily LA331_13230 PF13464 Domain of unknown function (DUF4115) LA331_13235 PF04551 GcpE protein LA331_13240 PF13393 Histidyl-tRNA synthetase LA331_13240 PF03129 Anticodon binding domain LA331_13250 PF13360 PQQ-like domain LA331_13255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LA331_13255 PF01926 50S ribosome-binding GTPase LA331_13280 PF03819 MazG nucleotide pyrophosphohydrolase domain LA331_13285 PF10531 SLBB domain LA331_13290 PF01743 Poly A polymerase head domain LA331_13290 PF12626 Polymerase A arginine-rich C-terminus LA331_13290 PF12627 Probable RNA and SrmB- binding site of polymerase A LA331_13295 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LA331_13300 PF02548 Ketopantoate hydroxymethyltransferase LA331_13305 PF02569 Pantoate-beta-alanine ligase LA331_13310 PF03668 P-loop ATPase protein family LA331_13315 PF00381 PTS HPr component phosphorylation site LA331_13320 PF04751 Protein of unknown function (DUF615) LA331_13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_13325 PF00512 His Kinase A (phospho-acceptor) domain LA331_13330 PF03710 Glutamate-ammonia ligase adenylyltransferase LA331_13330 PF08335 GlnD PII-uridylyltransferase LA331_13335 PF01063 Amino-transferase class IV LA331_13355 PF13439 Glycosyltransferase Family 4 LA331_13355 PF00534 Glycosyl transferases group 1 LA331_13360 PF00534 Glycosyl transferases group 1 LA331_13360 PF13439 Glycosyltransferase Family 4 LA331_13375 PF00152 tRNA synthetases class II (D, K and N) LA331_13375 PF02938 GAD domain LA331_13375 PF01336 OB-fold nucleic acid binding domain LA331_13385 PF07715 TonB-dependent Receptor Plug Domain LA331_13385 PF00593 TonB dependent receptor LA331_13405 PF06146 Phosphate-starvation-inducible E LA331_13415 PF12806 Acetyl-CoA dehydrogenase C-terminal like LA331_13415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_13415 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_13415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_13420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA331_13420 PF12806 Acetyl-CoA dehydrogenase C-terminal like LA331_13420 PF02770 Acyl-CoA dehydrogenase, middle domain LA331_13420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA331_13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_13430 PF00512 His Kinase A (phospho-acceptor) domain LA331_13430 PF00672 HAMP domain LA331_13435 PF00072 Response regulator receiver domain LA331_13435 PF00486 Transcriptional regulatory protein, C terminal LA331_13445 PF00324 Amino acid permease LA331_13460 PF04237 YjbR LA331_13465 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LA331_13480 PF01923 Cobalamin adenosyltransferase LA331_13485 PF07715 TonB-dependent Receptor Plug Domain LA331_13485 PF00593 TonB dependent receptor LA331_13490 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LA331_13495 PF00291 Pyridoxal-phosphate dependent enzyme LA331_13520 PF00290 Tryptophan synthase alpha chain LA331_13525 PF01039 Carboxyl transferase domain LA331_13530 PF02875 Mur ligase family, glutamate ligase domain LA331_13530 PF08245 Mur ligase middle domain LA331_13545 PF10417 C-terminal domain of 1-Cys peroxiredoxin LA331_13545 PF00578 AhpC/TSA family LA331_13550 PF01043 SecA preprotein cross-linking domain LA331_13550 PF02810 SEC-C motif LA331_13550 PF07517 SecA DEAD-like domain LA331_13550 PF07516 SecA Wing and Scaffold domain LA331_13560 PF01960 ArgJ family LA331_13565 PF02445 Quinolinate synthetase A protein LA331_13600 PF13737 Transposase DDE domain LA331_13630 PF04552 Sigma-54, DNA binding domain LA331_13630 PF04963 Sigma-54 factor, core binding domain LA331_13630 PF00309 Sigma-54 factor, Activator interacting domain (AID) LA331_13635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LA331_13640 PF01722 BolA-like protein LA331_13645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA331_13650 PF01634 ATP phosphoribosyltransferase LA331_13655 PF00815 Histidinol dehydrogenase LA331_13660 PF00155 Aminotransferase class I and II LA331_13665 PF00425 chorismate binding enzyme LA331_13665 PF04715 Anthranilate synthase component I, N terminal region LA331_13705 PF00293 NUDIX domain LA331_13715 PF00814 Glycoprotease family LA331_13720 PF02673 Bacitracin resistance protein BacA LA331_13725 PF04445 Putative SAM-dependent methyltransferase LA331_13735 PF00756 Putative esterase LA331_13755 PF00834 Ribulose-phosphate 3 epimerase family LA331_13760 PF00893 Small Multidrug Resistance protein LA331_13765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LA331_13765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LA331_13770 PF08378 Nuclease-related domain LA331_13775 PF01207 Dihydrouridine synthase (Dus) LA331_13780 PF07690 Major Facilitator Superfamily LA331_13785 PF00171 Aldehyde dehydrogenase family LA331_13785 PF01575 MaoC like domain LA331_13790 PF05138 Phenylacetic acid catabolic protein LA331_13795 PF06243 Phenylacetic acid degradation B LA331_13800 PF05138 Phenylacetic acid catabolic protein LA331_13805 PF01883 Iron-sulfur cluster assembly protein LA331_13810 PF00970 Oxidoreductase FAD-binding domain LA331_13810 PF00111 2Fe-2S iron-sulfur cluster binding domain LA331_13810 PF00175 Oxidoreductase NAD-binding domain LA331_13815 PF00378 Enoyl-CoA hydratase/isomerase LA331_13820 PF00108 Thiolase, N-terminal domain LA331_13820 PF02803 Thiolase, C-terminal domain LA331_13825 PF00501 AMP-binding enzyme LA331_13825 PF14535 AMP-binding enzyme C-terminal domain LA331_13830 PF07848 PaaX-like protein LA331_13830 PF08223 PaaX-like protein C-terminal domain LA331_13835 PF00132 Bacterial transferase hexapeptide (six repeats) LA331_13840 PF08241 Methyltransferase domain LA331_13850 PF00448 SRP54-type protein, GTPase domain LA331_13850 PF02978 Signal peptide binding domain LA331_13850 PF02881 SRP54-type protein, helical bundle domain LA331_13860 PF06821 Serine hydrolase LA331_13865 PF03309 Type III pantothenate kinase LA331_13870 PF08279 HTH domain LA331_13870 PF02237 Biotin protein ligase C terminal domain LA331_13870 PF03099 Biotin/lipoate A/B protein ligase family LA331_13875 PF01925 Sulfite exporter TauE/SafE LA331_13885 PF06470 SMC proteins Flexible Hinge Domain LA331_13885 PF02463 RecF/RecN/SMC N terminal domain LA331_13895 PF00533 BRCA1 C Terminus (BRCT) domain LA331_13895 PF01653 NAD-dependent DNA ligase adenylation domain LA331_13895 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LA331_13895 PF12826 Helix-hairpin-helix motif LA331_13895 PF03120 NAD-dependent DNA ligase OB-fold domain LA331_13900 PF05971 RNA methyltransferase LA331_13905 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LA331_13910 PF00210 Ferritin-like domain LA331_13915 PF02472 Biopolymer transport protein ExbD/TolR LA331_13920 PF02472 Biopolymer transport protein ExbD/TolR LA331_13925 PF01618 MotA/TolQ/ExbB proton channel family LA331_13930 PF03544 Gram-negative bacterial TonB protein C-terminal LA331_13935 PF07715 TonB-dependent Receptor Plug Domain LA331_13935 PF00593 TonB dependent receptor LA331_13940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA331_13950 PF01432 Peptidase family M3 LA331_13955 PF00528 Binding-protein-dependent transport system inner membrane component LA331_13960 PF00528 Binding-protein-dependent transport system inner membrane component LA331_13960 PF12911 N-terminal TM domain of oligopeptide transport permease C LA331_13965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA331_13965 PF00005 ABC transporter LA331_13975 PF01479 S4 domain LA331_13975 PF00849 RNA pseudouridylate synthase LA331_13980 PF04079 Segregation and condensation complex subunit ScpB LA331_13985 PF02616 Segregation and condensation protein ScpA LA331_14000 PF01300 Telomere recombination LA331_14005 PF04315 Elongation factor P hydroxylase LA331_14010 PF02620 Large ribosomal RNA subunit accumulation protein YceD LA331_14015 PF01783 Ribosomal L32p protein family LA331_14020 PF00698 Acyl transferase domain LA331_14030 PF00550 Phosphopantetheine attachment site LA331_14035 PF04972 BON domain LA331_14035 PF01476 LysM domain LA331_14040 PF01037 Lrp/AsnC ligand binding domain LA331_14045 PF01266 FAD dependent oxidoreductase LA331_14050 PF00842 Alanine racemase, C-terminal domain LA331_14050 PF01168 Alanine racemase, N-terminal domain LA331_14055 PF01042 Endoribonuclease L-PSP LA331_14060 PF00324 Amino acid permease LA331_14065 PF03653 Uncharacterised protein family (UPF0093) LA331_14070 PF00109 Beta-ketoacyl synthase, N-terminal domain LA331_14070 PF02801 Beta-ketoacyl synthase, C-terminal domain LA331_14080 PF00164 Ribosomal protein S12/S23 LA331_14085 PF00177 Ribosomal protein S7p/S5e LA331_14090 PF00009 Elongation factor Tu GTP binding domain LA331_14090 PF00679 Elongation factor G C-terminus LA331_14090 PF14492 Elongation Factor G, domain II LA331_14090 PF03764 Elongation factor G, domain IV LA331_14090 PF03144 Elongation factor Tu domain 2 LA331_14095 PF00009 Elongation factor Tu GTP binding domain LA331_14095 PF03144 Elongation factor Tu domain 2 LA331_14095 PF03143 Elongation factor Tu C-terminal domain LA331_14105 PF00583 Acetyltransferase (GNAT) family LA331_14110 PF04377 Arginine-tRNA-protein transferase, C terminus LA331_14110 PF04376 Arginine-tRNA-protein transferase, N terminus LA331_14115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LA331_14120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_14125 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LA331_14125 PF17854 FtsK alpha domain LA331_14125 PF09397 Ftsk gamma domain LA331_14125 PF01580 FtsK/SpoIIIE family LA331_14135 PF03776 Septum formation topological specificity factor MinE LA331_14140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA331_14145 PF03775 Septum formation inhibitor MinC, C-terminal domain LA331_14155 PF01553 Acyltransferase LA331_14160 PF00691 OmpA family LA331_14160 PF13488 Glycine zipper LA331_14165 PF00580 UvrD/REP helicase N-terminal domain LA331_14165 PF13361 UvrD-like helicase C-terminal domain LA331_14170 PF00692 dUTPase LA331_14175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA331_14175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA331_14175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA331_14175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA331_14180 PF00696 Amino acid kinase family LA331_14190 PF13230 Glutamine amidotransferases class-II LA331_14195 PF01814 Hemerythrin HHE cation binding domain LA331_14205 PF03658 RnfH family Ubiquitin LA331_14210 PF04355 SmpA / OmlA family LA331_14215 PF01475 Ferric uptake regulator family LA331_14220 PF00437 Type II/IV secretion system protein LA331_14225 PF00437 Type II/IV secretion system protein LA331_14230 PF01168 Alanine racemase, N-terminal domain LA331_14245 PF12320 Type 5 capsule protein repressor C-terminal domain LA331_14245 PF00149 Calcineurin-like phosphoesterase LA331_14255 PF01370 NAD dependent epimerase/dehydratase family LA331_14255 PF08338 Domain of unknown function (DUF1731) LA331_14260 PF01266 FAD dependent oxidoreductase LA331_14265 PF00490 Delta-aminolevulinic acid dehydratase LA331_14270 PF03061 Thioesterase superfamily LA331_14275 PF00529 HlyD membrane-fusion protein of T1SS LA331_14275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA331_14280 PF07690 Major Facilitator Superfamily LA331_14285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LA331_14285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LA331_14300 PF00475 Imidazoleglycerol-phosphate dehydratase LA331_14300 PF08645 Polynucleotide kinase 3 phosphatase LA331_14330 PF01051 Initiator Replication protein LA331_14340 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_14380 PF01488 Shikimate / quinate 5-dehydrogenase LA331_14380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LA331_14380 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LA331_14400 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LA331_14410 PF07969 Amidohydrolase family LA331_14420 PF01565 FAD binding domain LA331_14420 PF02913 FAD linked oxidases, C-terminal domain LA331_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_14430 PF03466 LysR substrate binding domain LA331_14440 PF02028 BCCT, betaine/carnitine/choline family transporter LA331_14445 PF07859 alpha/beta hydrolase fold LA331_14450 PF00355 Rieske [2Fe-2S] domain LA331_14450 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LA331_14455 PF00171 Aldehyde dehydrogenase family LA331_14460 PF00970 Oxidoreductase FAD-binding domain LA331_14460 PF00111 2Fe-2S iron-sulfur cluster binding domain LA331_14460 PF00175 Oxidoreductase NAD-binding domain LA331_14470 PF03797 Autotransporter beta-domain LA331_14470 PF00082 Subtilase family LA331_14475 PF00589 Phage integrase family LA331_14475 PF14659 Phage integrase, N-terminal SAM-like domain LA331_14475 PF13356 Arm DNA-binding domain LA331_14480 PF13737 Transposase DDE domain LA331_14485 PF07690 Major Facilitator Superfamily LA331_14490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA331_14490 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_14490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA331_14490 PF18267 Rubredoxin NAD+ reductase C-terminal domain LA331_14490 PF04324 BFD-like [2Fe-2S] binding domain LA331_14495 PF04324 BFD-like [2Fe-2S] binding domain LA331_14495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA331_14495 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_14495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA331_14495 PF18267 Rubredoxin NAD+ reductase C-terminal domain LA331_14500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA331_14500 PF04324 BFD-like [2Fe-2S] binding domain LA331_14500 PF01568 Molydopterin dinucleotide binding domain LA331_14500 PF00384 Molybdopterin oxidoreductase LA331_14505 PF12804 MobA-like NTP transferase domain LA331_14510 PF04055 Radical SAM superfamily LA331_14510 PF06463 Molybdenum Cofactor Synthesis C LA331_14520 PF02391 MoaE protein LA331_14525 PF00994 Probable molybdopterin binding domain LA331_14525 PF01967 MoaC family LA331_14530 PF00994 Probable molybdopterin binding domain LA331_14530 PF03454 MoeA C-terminal region (domain IV) LA331_14530 PF03453 MoeA N-terminal region (domain I and II) LA331_14540 PF00528 Binding-protein-dependent transport system inner membrane component LA331_14545 PF00005 ABC transporter LA331_14545 PF03459 TOBE domain LA331_14550 PF00563 EAL domain LA331_14550 PF00990 Diguanylate cyclase, GGDEF domain LA331_14550 PF03707 Bacterial signalling protein N terminal repeat LA331_14555 PF07694 5TMR of 5TMR-LYT LA331_14555 PF00990 Diguanylate cyclase, GGDEF domain LA331_14570 PF00210 Ferritin-like domain LA331_14575 PF00199 Catalase LA331_14575 PF06628 Catalase-related immune-responsive LA331_14575 PF18011 C-terminal domain found in long catalases LA331_14595 PF05401 Nodulation protein S (NodS) LA331_14605 PF07690 Major Facilitator Superfamily LA331_14610 PF00982 Glycosyltransferase family 20 LA331_14615 PF02358 Trehalose-phosphatase LA331_14625 PF05992 SbmA/BacA-like family LA331_14640 PF05649 Peptidase family M13 LA331_14640 PF01431 Peptidase family M13 LA331_14645 PF01431 Peptidase family M13 LA331_14645 PF05649 Peptidase family M13 LA331_14655 PF00892 EamA-like transporter family LA331_14670 PF02934 GatB/GatE catalytic domain LA331_14670 PF02637 GatB domain LA331_14675 PF01425 Amidase LA331_14680 PF02686 Glu-tRNAGln amidotransferase C subunit LA331_14690 PF04085 rod shape-determining protein MreC LA331_14695 PF04093 rod shape-determining protein MreD LA331_14700 PF02545 Maf-like protein LA331_14705 PF10150 Ribonuclease E/G family LA331_14705 PF00575 S1 RNA binding domain LA331_14715 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LA331_14715 PF06974 Protein of unknown function (DUF1298) LA331_14720 PF01507 Phosphoadenosine phosphosulfate reductase family LA331_14745 PF00324 Amino acid permease LA331_14750 PF04303 PrpF protein LA331_14755 PF00348 Polyprenyl synthetase LA331_14760 PF00474 Sodium:solute symporter family LA331_14765 PF01145 SPFH domain / Band 7 family LA331_14775 PF01734 Patatin-like phospholipase LA331_14790 PF00267 Gram-negative porin LA331_14795 PF13419 Haloacid dehalogenase-like hydrolase LA331_14800 PF04239 Protein of unknown function (DUF421) LA331_14805 PF00194 Eukaryotic-type carbonic anhydrase LA331_14815 PF04480 Protein of unknown function (DUF559) LA331_14825 PF08264 Anticodon-binding domain of tRNA LA331_14825 PF00133 tRNA synthetases class I (I, L, M and V) LA331_14825 PF10458 Valyl tRNA synthetase tRNA binding arm LA331_14840 PF04960 Glutaminase LA331_14845 PF02733 Dak1 domain LA331_14850 PF04480 Protein of unknown function (DUF559) LA331_14860 PF00665 Integrase core domain LA331_14860 PF13936 Helix-turn-helix domain LA331_14865 PF02310 B12 binding domain LA331_14865 PF02607 B12 binding domain LA331_14865 PF02965 Vitamin B12 dependent methionine synthase, activation domain LA331_14865 PF00809 Pterin binding enzyme LA331_14865 PF02574 Homocysteine S-methyltransferase LA331_14870 PF01384 Phosphate transporter family LA331_14880 PF01497 Periplasmic binding protein LA331_14890 PF01106 NifU-like domain LA331_14890 PF01521 Iron-sulphur cluster biosynthesis LA331_14895 PF00593 TonB dependent receptor LA331_14895 PF07715 TonB-dependent Receptor Plug Domain LA331_14905 PF00561 alpha/beta hydrolase fold LA331_14910 PF00484 Carbonic anhydrase LA331_14915 PF13472 GDSL-like Lipase/Acylhydrolase family LA331_14920 PF00005 ABC transporter LA331_14930 PF01694 Rhomboid family LA331_14935 PF00912 Transglycosylase LA331_14940 PF02503 Polyphosphate kinase middle domain LA331_14940 PF13090 Polyphosphate kinase C-terminal domain 2 LA331_14940 PF17941 Polyphosphate kinase C-terminal domain 1 LA331_14940 PF13089 Polyphosphate kinase N-terminal domain LA331_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_14950 PF03466 LysR substrate binding domain LA331_14955 PF00561 alpha/beta hydrolase fold LA331_14960 PF18113 Rubredoxin binding C-terminal domain LA331_14960 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_14965 PF00301 Rubredoxin LA331_14970 PF00156 Phosphoribosyl transferase domain LA331_14980 PF00152 tRNA synthetases class II (D, K and N) LA331_14980 PF01336 OB-fold nucleic acid binding domain LA331_14990 PF14052 Capsule assembly protein Wzi LA331_14995 PF00579 tRNA synthetases class I (W and Y) LA331_15000 PF05661 Protein of unknown function (DUF808) LA331_15005 PF04228 Putative neutral zinc metallopeptidase LA331_15015 PF00999 Sodium/hydrogen exchanger family LA331_15020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LA331_15025 PF00582 Universal stress protein family LA331_15030 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_15045 PF00795 Carbon-nitrogen hydrolase LA331_15045 PF02540 NAD synthase LA331_15055 PF00285 Citrate synthase, C-terminal domain LA331_15060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA331_15065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA331_15070 PF00890 FAD binding domain LA331_15070 PF02910 Fumarate reductase flavoprotein C-term LA331_15075 PF13085 2Fe-2S iron-sulfur cluster binding domain LA331_15080 PF02779 Transketolase, pyrimidine binding domain LA331_15080 PF16870 2-oxoglutarate dehydrogenase C-terminal LA331_15080 PF00676 Dehydrogenase E1 component LA331_15080 PF16078 2-oxoglutarate dehydrogenase N-terminus LA331_15085 PF00364 Biotin-requiring enzyme LA331_15085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA331_15085 PF02817 e3 binding domain LA331_15090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_15090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA331_15095 PF08442 ATP-grasp domain LA331_15095 PF00549 CoA-ligase LA331_15100 PF02629 CoA binding domain LA331_15100 PF00549 CoA-ligase LA331_15105 PF01145 SPFH domain / Band 7 family LA331_15105 PF15975 Flotillin LA331_15120 PF01507 Phosphoadenosine phosphosulfate reductase family LA331_15125 PF00009 Elongation factor Tu GTP binding domain LA331_15150 PF00085 Thioredoxin LA331_15160 PF08240 Alcohol dehydrogenase GroES-like domain LA331_15160 PF00698 Acyl transferase domain LA331_15160 PF00550 Phosphopantetheine attachment site LA331_15160 PF08659 KR domain LA331_15160 PF14765 Polyketide synthase dehydratase LA331_15185 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LA331_15185 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LA331_15200 PF00083 Sugar (and other) transporter LA331_15205 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LA331_15205 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LA331_15210 PF00781 Diacylglycerol kinase catalytic domain LA331_15220 PF00166 Chaperonin 10 Kd subunit LA331_15225 PF00118 TCP-1/cpn60 chaperonin family LA331_15240 PF13817 IS66 C-terminal element LA331_15240 PF03050 Transposase IS66 family LA331_15240 PF13007 Transposase C of IS166 homeodomain LA331_15240 PF13005 zinc-finger binding domain of transposase IS66 LA331_15265 PF01553 Acyltransferase LA331_15295 PF03717 Penicillin-binding Protein dimerisation domain LA331_15295 PF00905 Penicillin binding protein transpeptidase domain LA331_15310 PF05191 Adenylate kinase, active site lid LA331_15320 PF00730 HhH-GPD superfamily base excision DNA repair protein LA331_15320 PF00633 Helix-hairpin-helix motif LA331_15320 PF10576 Iron-sulfur binding domain of endonuclease III LA331_15325 PF04060 Putative Fe-S cluster LA331_15330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LA331_15330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LA331_15340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LA331_15345 PF02590 Predicted SPOUT methyltransferase LA331_15350 PF04389 Peptidase family M28 LA331_15355 PF00004 ATPase family associated with various cellular activities (AAA) LA331_15355 PF05362 Lon protease (S16) C-terminal proteolytic domain LA331_15355 PF02190 ATP-dependent protease La (LON) substrate-binding domain LA331_15360 PF01812 5-formyltetrahydrofolate cyclo-ligase family LA331_15380 PF03695 Uncharacterised protein family (UPF0149) LA331_15385 PF05195 Aminopeptidase P, N-terminal domain LA331_15385 PF00557 Metallopeptidase family M24 LA331_15395 PF13936 Helix-turn-helix domain LA331_15395 PF00665 Integrase core domain LA331_15405 PF14864 Alkyl sulfatase C-terminal LA331_15405 PF14863 Alkyl sulfatase dimerisation LA331_15405 PF00753 Metallo-beta-lactamase superfamily LA331_15410 PF13936 Helix-turn-helix domain LA331_15410 PF00665 Integrase core domain LA331_15415 PF01757 Acyltransferase family LA331_15425 PF01494 FAD binding domain LA331_15430 PF01494 FAD binding domain LA331_15440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA331_15445 PF04348 LppC putative lipoprotein LA331_15450 PF02021 Uncharacterised protein family UPF0102 LA331_15455 PF04972 BON domain LA331_15460 PF07859 alpha/beta hydrolase fold LA331_15465 PF09297 NADH pyrophosphatase zinc ribbon domain LA331_15465 PF00293 NUDIX domain LA331_15475 PF00929 Exonuclease LA331_15480 PF01464 Transglycosylase SLT domain LA331_15480 PF01476 LysM domain LA331_15485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA331_15490 PF00528 Binding-protein-dependent transport system inner membrane component LA331_15495 PF12911 N-terminal TM domain of oligopeptide transport permease C LA331_15495 PF00528 Binding-protein-dependent transport system inner membrane component LA331_15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_15500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA331_15525 PF02677 Epoxyqueuosine reductase QueH LA331_15555 PF01717 Cobalamin-independent synthase, Catalytic domain LA331_15555 PF08267 Cobalamin-independent synthase, N-terminal domain LA331_15560 PF01613 Flavin reductase like domain LA331_15565 PF01925 Sulfite exporter TauE/SafE LA331_15570 PF03466 LysR substrate binding domain LA331_15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_15580 PF00884 Sulfatase LA331_15580 PF08019 Phosphoethanolamine transferase EptA/EptB LA331_15585 PF00486 Transcriptional regulatory protein, C terminal LA331_15585 PF00072 Response regulator receiver domain LA331_15590 PF00512 His Kinase A (phospho-acceptor) domain LA331_15590 PF08521 Two-component sensor kinase N-terminal LA331_15590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_15600 PF01219 Prokaryotic diacylglycerol kinase LA331_15610 PF00005 ABC transporter LA331_15615 PF01032 FecCD transport family LA331_15620 PF01497 Periplasmic binding protein LA331_15625 PF07715 TonB-dependent Receptor Plug Domain LA331_15625 PF00593 TonB dependent receptor LA331_15630 PF07729 FCD domain LA331_15630 PF00392 Bacterial regulatory proteins, gntR family LA331_15635 PF08240 Alcohol dehydrogenase GroES-like domain LA331_15635 PF00107 Zinc-binding dehydrogenase LA331_15645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA331_15645 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA331_15650 PF02817 e3 binding domain LA331_15650 PF00364 Biotin-requiring enzyme LA331_15650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA331_15655 PF02780 Transketolase, C-terminal domain LA331_15655 PF02779 Transketolase, pyrimidine binding domain LA331_15660 PF00676 Dehydrogenase E1 component LA331_15665 PF04055 Radical SAM superfamily LA331_15680 PF02254 TrkA-N domain LA331_15680 PF00999 Sodium/hydrogen exchanger family LA331_15690 PF02416 mttA/Hcf106 family LA331_15695 PF02416 mttA/Hcf106 family LA331_15700 PF00902 Sec-independent protein translocase protein (TatC) LA331_15720 PF01548 Transposase LA331_15720 PF02371 Transposase IS116/IS110/IS902 family LA331_15725 PF13173 AAA domain LA331_15725 PF13635 Domain of unknown function (DUF4143) LA331_15745 PF13610 DDE domain LA331_15760 PF13411 MerR HTH family regulatory protein LA331_15815 PF17755 UvrA DNA-binding domain LA331_15825 PF00107 Zinc-binding dehydrogenase LA331_15825 PF08240 Alcohol dehydrogenase GroES-like domain LA331_15830 PF00440 Bacterial regulatory proteins, tetR family LA331_15830 PF16925 Tetracyclin repressor-like, C-terminal domain LA331_15835 PF03466 LysR substrate binding domain LA331_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_15840 PF03788 LrgA family LA331_15845 PF04172 LrgB-like family LA331_15880 PF13614 AAA domain LA331_15885 PF02195 ParB-like nuclease domain LA331_15885 PF17762 HTH domain found in ParB protein LA331_15935 PF01636 Phosphotransferase enzyme family LA331_15940 PF00593 TonB dependent receptor LA331_15940 PF07715 TonB-dependent Receptor Plug Domain LA331_15950 PF00171 Aldehyde dehydrogenase family LA331_15960 PF00465 Iron-containing alcohol dehydrogenase LA331_15985 PF13533 Biotin-lipoyl like LA331_16000 PF04055 Radical SAM superfamily LA331_16000 PF06968 Biotin and Thiamin Synthesis associated domain LA331_16005 PF12697 Alpha/beta hydrolase family LA331_16005 PF08241 Methyltransferase domain LA331_16010 PF07715 TonB-dependent Receptor Plug Domain LA331_16010 PF00593 TonB dependent receptor LA331_16050 PF02350 UDP-N-acetylglucosamine 2-epimerase LA331_16055 PF13340 Putative transposase of IS4/5 family (DUF4096) LA331_16085 PF00561 alpha/beta hydrolase fold LA331_16090 PF00202 Aminotransferase class-III LA331_16090 PF06968 Biotin and Thiamin Synthesis associated domain LA331_16090 PF04055 Radical SAM superfamily LA331_16095 PF00155 Aminotransferase class I and II LA331_16120 PF00226 DnaJ domain LA331_16120 PF01556 DnaJ C terminal domain LA331_16130 PF00330 Aconitase family (aconitate hydratase) LA331_16130 PF00694 Aconitase C-terminal domain LA331_16150 PF08240 Alcohol dehydrogenase GroES-like domain LA331_16150 PF00107 Zinc-binding dehydrogenase LA331_16155 PF00106 short chain dehydrogenase LA331_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA331_16160 PF03466 LysR substrate binding domain LA331_16165 PF08240 Alcohol dehydrogenase GroES-like domain LA331_16165 PF00107 Zinc-binding dehydrogenase LA331_16170 PF16197 Ketoacyl-synthetase C-terminal extension LA331_16170 PF08240 Alcohol dehydrogenase GroES-like domain LA331_16170 PF00698 Acyl transferase domain LA331_16170 PF00550 Phosphopantetheine attachment site LA331_16170 PF02801 Beta-ketoacyl synthase, C-terminal domain LA331_16170 PF14765 Polyketide synthase dehydratase LA331_16170 PF08659 KR domain LA331_16170 PF00109 Beta-ketoacyl synthase, N-terminal domain LA331_16175 PF02583 Metal-sensitive transcriptional repressor LA331_16180 PF08240 Alcohol dehydrogenase GroES-like domain LA331_16180 PF00107 Zinc-binding dehydrogenase LA331_16185 PF00756 Putative esterase LA331_16200 PF00465 Iron-containing alcohol dehydrogenase LA331_16220 PF16925 Tetracyclin repressor-like, C-terminal domain LA331_16220 PF00440 Bacterial regulatory proteins, tetR family LA331_16225 PF00107 Zinc-binding dehydrogenase LA331_16225 PF16884 N-terminal domain of oxidoreductase LA331_16250 PF06039 Malate:quinone oxidoreductase (Mqo) LA331_16280 PF12146 Serine aminopeptidase, S33 LA331_16295 PF07690 Major Facilitator Superfamily LA331_16300 PF07715 TonB-dependent Receptor Plug Domain LA331_16300 PF00593 TonB dependent receptor LA331_16310 PF13737 Transposase DDE domain LA331_16325 PF13737 Transposase DDE domain LA331_16340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA331_16350 PF13737 Transposase DDE domain LA331_16355 PF13635 Domain of unknown function (DUF4143) LA331_16355 PF13173 AAA domain LA331_16380 PF13610 DDE domain LA331_16385 PF01545 Cation efflux family LA331_16390 PF00873 AcrB/AcrD/AcrF family LA331_16395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA331_16400 PF02321 Outer membrane efflux protein LA331_16410 PF13411 MerR HTH family regulatory protein LA331_16415 PF01545 Cation efflux family LA331_16445 PF03358 NADPH-dependent FMN reductase LA331_16450 PF01758 Sodium Bile acid symporter family LA331_16460 PF01022 Bacterial regulatory protein, arsR family LA331_16465 PF03960 ArsC family LA331_16470 PF00239 Resolvase, N terminal domain LA331_16470 PF02796 Helix-turn-helix domain of resolvase LA331_16505 PF05973 Phage derived protein Gp49-like (DUF891) LA331_16520 PF13411 MerR HTH family regulatory protein LA331_16525 PF01545 Cation efflux family LA331_16530 PF13610 DDE domain LA331_16535 PF01323 DSBA-like thioredoxin domain LA331_16540 PF13737 Transposase DDE domain LA331_16545 PF00403 Heavy-metal-associated domain LA331_16585 PF13194 Domain of unknown function (DUF4010) LA331_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA331_16590 PF00672 HAMP domain LA331_16590 PF00512 His Kinase A (phospho-acceptor) domain LA331_16595 PF00072 Response regulator receiver domain LA331_16595 PF00486 Transcriptional regulatory protein, C terminal LA331_16605 PF07732 Multicopper oxidase LA331_16605 PF00394 Multicopper oxidase LA331_16605 PF07731 Multicopper oxidase LA331_16625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA331_16630 PF00873 AcrB/AcrD/AcrF family LA331_16690 PF13438 Domain of unknown function (DUF4113) LA331_16690 PF11799 impB/mucB/samB family C-terminal domain LA331_16690 PF00817 impB/mucB/samB family LA331_16695 PF00717 Peptidase S24-like LA331_16695 PF01726 LexA DNA binding domain LA331_16715 PF04233 Phage Mu protein F like protein LA331_16725 PF02796 Helix-turn-helix domain of resolvase LA331_16725 PF00239 Resolvase, N terminal domain LA331_16735 PF00313 'Cold-shock' DNA-binding domain LA331_16755 PF01051 Initiator Replication protein LA331_16770 PF08240 Alcohol dehydrogenase GroES-like domain LA331_16770 PF13823 Alcohol dehydrogenase GroES-associated LA331_16770 PF00107 Zinc-binding dehydrogenase LA331_16835 PF01051 Initiator Replication protein LA331_16850 PF09828 Chromate resistance exported protein LA331_16860 PF00582 Universal stress protein family