locus-tag class description RYU24_00010 IPR003593 AAA+ ATPase domain RYU24_00010 IPR001957 Chromosomal replication control, initiator DnaA RYU24_00010 IPR020591 Chromosomal replication control, initiator DnaA-like RYU24_00010 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RYU24_00010 IPR013317 Chromosomal replication initiator protein DnaA RYU24_00010 IPR013159 Chromosomal replication initiator, DnaA C-terminal RYU24_00010 IPR024633 DnaA N-terminal domain RYU24_00010 IPR038454 DnaA, N-terminal domain superfamily RYU24_00010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_00010 IPR010921 Trp repressor/replication initiator RYU24_00020 IPR001001 DNA polymerase III, beta sliding clamp RYU24_00020 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal RYU24_00020 IPR022637 DNA polymerase III, beta sliding clamp, central RYU24_00020 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal RYU24_00030 IPR042174 DNA-binding RecF, domain 2 RYU24_00030 IPR003395 RecF/RecN/SMC, N-terminal RYU24_00030 IPR001238 DNA-binding, RecF RYU24_00030 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_00040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_00040 IPR002288 DNA gyrase B subunit, C-terminal RYU24_00040 IPR011557 DNA gyrase, subunit B RYU24_00040 IPR041423 DNA gyrase subunit B insert domain RYU24_00040 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_00040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_00040 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_00040 IPR001241 DNA topoisomerase, type IIA RYU24_00040 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RYU24_00040 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RYU24_00040 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RYU24_00040 IPR018522 DNA topoisomerase, type IIA, conserved site RYU24_00040 IPR006171 TOPRIM domain RYU24_00040 IPR034160 DNA gyrase subunit B, TOPRIM domain RYU24_00060 IPR036291 NAD(P)-binding domain superfamily RYU24_00060 IPR011032 GroES-like superfamily RYU24_00060 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RYU24_00060 IPR013154 Alcohol dehydrogenase, N-terminal RYU24_00060 IPR013149 Alcohol dehydrogenase, C-terminal RYU24_00060 IPR027399 Alcohol dehydrogenase GroES-associated RYU24_00070 IPR003593 AAA+ ATPase domain RYU24_00070 IPR032781 ABC-transporter extension domain RYU24_00070 IPR003439 ABC transporter-like RYU24_00070 IPR017871 ABC transporter, conserved site RYU24_00070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_00080 IPR038404 TRAP transporter solute receptor DctP superfamily RYU24_00090 IPR038404 TRAP transporter solute receptor DctP superfamily RYU24_00100 IPR038404 TRAP transporter solute receptor DctP superfamily RYU24_00110 IPR000361 FeS cluster biogenesis RYU24_00110 IPR016092 FeS cluster insertion protein RYU24_00110 IPR017870 FeS cluster insertion, C-terminal, conserved site RYU24_00110 IPR023063 FeS cluster insertion protein ErpA RYU24_00110 IPR035903 HesB-like domain superfamily RYU24_00150 IPR018181 Heat shock protein 70, conserved site RYU24_00150 IPR013126 Heat shock protein 70 family RYU24_00150 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RYU24_00150 IPR012725 Chaperone DnaK RYU24_00150 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RYU24_00160 IPR000740 GrpE nucleotide exchange factor RYU24_00160 IPR013805 GrpE nucleotide exchange factor, coiled-coil RYU24_00160 IPR009012 GrpE nucleotide exchange factor, head RYU24_00180 IPR029058 Alpha/Beta hydrolase fold RYU24_00180 IPR013094 Alpha/beta hydrolase fold-3 RYU24_00210 IPR029000 Cyclophilin-like domain superfamily RYU24_00210 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RYU24_00210 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RYU24_00220 IPR036259 MFS transporter superfamily RYU24_00220 IPR011701 Major facilitator superfamily RYU24_00220 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RYU24_00220 IPR020846 Major facilitator superfamily domain RYU24_00220 IPR005829 Sugar transporter, conserved site RYU24_00230 IPR005829 Sugar transporter, conserved site RYU24_00230 IPR036259 MFS transporter superfamily RYU24_00230 IPR011701 Major facilitator superfamily RYU24_00230 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RYU24_00230 IPR020846 Major facilitator superfamily domain RYU24_00260 IPR020683 Ankyrin repeat-containing domain RYU24_00260 IPR002110 Ankyrin repeat RYU24_00260 IPR036770 Ankyrin repeat-containing domain superfamily RYU24_00270 IPR006286 Deglycase PfpI RYU24_00270 IPR029062 Class I glutamine amidotransferase-like RYU24_00270 IPR002818 DJ-1/PfpI RYU24_00290 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_00290 IPR015590 Aldehyde dehydrogenase domain RYU24_00290 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_00290 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_00290 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_00300 IPR037272 Sodium:neurotransmitter symporter superfamily RYU24_00300 IPR000175 Sodium:neurotransmitter symporter RYU24_00310 IPR003689 Zinc/iron permease RYU24_00310 IPR023498 Zinc transporter ZupT RYU24_00320 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RYU24_00320 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type RYU24_00320 IPR035926 NusB-like superfamily RYU24_00320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_00320 IPR006027 NusB/RsmB/TIM44 RYU24_00320 IPR004573 rRNA small subunit methyltransferase B RYU24_00320 IPR023267 RNA (C5-cytosine) methyltransferase RYU24_00330 IPR005794 Methionyl-tRNA formyltransferase RYU24_00330 IPR037022 Formyl transferase, C-terminal domain superfamily RYU24_00330 IPR002376 Formyl transferase, N-terminal RYU24_00330 IPR036477 Formyl transferase, N-terminal domain superfamily RYU24_00330 IPR011034 Formyl transferase-like, C-terminal domain superfamily RYU24_00330 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain RYU24_00330 IPR005793 Formyl transferase, C-terminal RYU24_00340 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RYU24_00340 IPR042096 Dihydroxy-acid dehydratase, C-terminal RYU24_00340 IPR004404 Dihydroxy-acid dehydratase RYU24_00340 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RYU24_00340 IPR037237 IlvD/EDD, N-terminal domain RYU24_00350 IPR037237 IlvD/EDD, N-terminal domain RYU24_00350 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RYU24_00350 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RYU24_00350 IPR004404 Dihydroxy-acid dehydratase RYU24_00350 IPR042096 Dihydroxy-acid dehydratase, C-terminal RYU24_00390 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_00390 IPR000847 Transcription regulator HTH, LysR RYU24_00390 IPR020890 Transcription regulator HTH, HdfR RYU24_00390 IPR005119 LysR, substrate-binding RYU24_00390 IPR036390 Winged helix DNA-binding domain superfamily RYU24_00400 IPR006043 Xanthine/uracil/vitamin C permease RYU24_00400 IPR006042 Xanthine/uracil permease RYU24_00400 IPR019918 Pyrimidine permease RutG, predicted RYU24_00410 IPR021135 Phosphoenolpyruvate carboxylase RYU24_00410 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type RYU24_00410 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site RYU24_00410 IPR033129 Phosphoenolpyruvate carboxylase, His active site RYU24_00410 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_00420 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RYU24_00420 IPR001647 DNA-binding HTH domain, TetR-type RYU24_00420 IPR009057 Homeobox-like domain superfamily RYU24_00430 IPR006143 RND efflux pump, membrane fusion protein RYU24_00430 IPR030190 Macrolide export protein MacA RYU24_00430 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RYU24_00440 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RYU24_00440 IPR001036 Acriflavin resistance protein RYU24_00460 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RYU24_00460 IPR008971 HSP40/DnaJ peptide-binding RYU24_00460 IPR018253 DnaJ domain, conserved site RYU24_00460 IPR001623 DnaJ domain RYU24_00460 IPR002939 Chaperone DnaJ, C-terminal RYU24_00460 IPR012724 Chaperone DnaJ RYU24_00460 IPR036869 Chaperone J-domain superfamily RYU24_00460 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RYU24_00490 IPR010095 Transposase IS605, OrfB, C-terminal RYU24_00490 IPR001959 Probable transposase, IS891/IS1136/IS1341 RYU24_00490 IPR021027 Transposase, putative, helix-turn-helix domain RYU24_00500 IPR022663 Dihydrodipicolinate reductase, C-terminal RYU24_00500 IPR000846 Dihydrodipicolinate reductase, N-terminal RYU24_00500 IPR022664 Dihydrodipicolinate reductase, conserved site RYU24_00500 IPR023940 Dihydrodipicolinate reductase RYU24_00500 IPR036291 NAD(P)-binding domain superfamily RYU24_00520 IPR002559 Transposase, IS4-like RYU24_00520 IPR012337 Ribonuclease H-like superfamily RYU24_00520 IPR002559 Transposase, IS4-like RYU24_00520 IPR024473 Transposase, IS4, N-terminal RYU24_00520 IPR024473 Transposase, IS4, N-terminal RYU24_00520 IPR012337 Ribonuclease H-like superfamily RYU24_00530 IPR011701 Major facilitator superfamily RYU24_00530 IPR036259 MFS transporter superfamily RYU24_00530 IPR020846 Major facilitator superfamily domain RYU24_00540 IPR018170 Aldo/keto reductase, conserved site RYU24_00540 IPR020471 Aldo/keto reductase RYU24_00540 IPR036812 NADP-dependent oxidoreductase domain superfamily RYU24_00540 IPR023210 NADP-dependent oxidoreductase domain RYU24_00550 IPR036390 Winged helix DNA-binding domain superfamily RYU24_00550 IPR000847 Transcription regulator HTH, LysR RYU24_00550 IPR005119 LysR, substrate-binding RYU24_00550 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_00560 IPR013154 Alcohol dehydrogenase, N-terminal RYU24_00560 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RYU24_00560 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RYU24_00560 IPR011032 GroES-like superfamily RYU24_00560 IPR020843 Polyketide synthase, enoylreductase domain RYU24_00560 IPR013149 Alcohol dehydrogenase, C-terminal RYU24_00560 IPR036291 NAD(P)-binding domain superfamily RYU24_00570 IPR004597 DNA-3-methyladenine glycosylase I RYU24_00570 IPR011257 DNA glycosylase RYU24_00570 IPR005019 Methyladenine glycosylase RYU24_00590 IPR016047 Peptidase M23 RYU24_00590 IPR011055 Duplicated hybrid motif RYU24_00600 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_00600 IPR003265 HhH-GPD domain RYU24_00600 IPR004035 Endonuclease III, iron-sulphur binding site RYU24_00600 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RYU24_00600 IPR004036 Endonuclease III-like, conserved site-2 RYU24_00600 IPR011257 DNA glycosylase RYU24_00600 IPR005760 A/G-specific adenine glycosylase MutY RYU24_00600 IPR029119 MutY, C-terminal RYU24_00600 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RYU24_00600 IPR000445 Helix-hairpin-helix motif RYU24_00630 IPR008104 Macrophage infectivity potentiator RYU24_00630 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RYU24_00630 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal RYU24_00630 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily RYU24_00640 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily RYU24_00640 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal RYU24_00640 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RYU24_00640 IPR008104 Macrophage infectivity potentiator RYU24_00650 IPR003856 Polysaccharide chain length determinant N-terminal domain RYU24_00650 IPR032807 Tyrosine kinase, G-rich domain RYU24_00650 IPR005702 Exopolysaccharide synthesis protein RYU24_00650 IPR025669 AAA domain RYU24_00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_00660 IPR023485 Phosphotyrosine protein phosphatase I RYU24_00660 IPR017867 Protein-tyrosine phosphatase, low molecular weight RYU24_00660 IPR036196 Phosphotyrosine protein phosphatase I superfamily RYU24_00670 IPR003715 Polysaccharide export protein RYU24_00670 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain RYU24_00670 IPR019554 Soluble ligand binding domain RYU24_00680 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_00680 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RYU24_00680 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RYU24_00680 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RYU24_00680 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RYU24_00680 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RYU24_00680 IPR036291 NAD(P)-binding domain superfamily RYU24_00680 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RYU24_00690 IPR001509 NAD-dependent epimerase/dehydratase RYU24_00690 IPR036291 NAD(P)-binding domain superfamily RYU24_00720 IPR018357 Hexapeptide transferase, conserved site RYU24_00720 IPR011004 Trimeric LpxA-like superfamily RYU24_00720 IPR001451 Hexapeptide repeat RYU24_00730 IPR001296 Glycosyl transferase, family 1 RYU24_00730 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RYU24_00740 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL RYU24_00740 IPR001296 Glycosyl transferase, family 1 RYU24_00740 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RYU24_00750 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RYU24_00750 IPR001296 Glycosyl transferase, family 1 RYU24_00760 IPR001451 Hexapeptide repeat RYU24_00760 IPR024688 Maltose/galactoside acetyltransferase RYU24_00760 IPR011004 Trimeric LpxA-like superfamily RYU24_00760 IPR039369 Galactoside O-acetyltransferase LacA-like RYU24_00770 IPR003362 Bacterial sugar transferase RYU24_00780 IPR001451 Hexapeptide repeat RYU24_00780 IPR020019 Sialic acid O-acyltransferase NeuD-like RYU24_00780 IPR011004 Trimeric LpxA-like superfamily RYU24_00780 IPR041561 PglD, N-terminal RYU24_00790 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_00790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_00790 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_00790 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RYU24_00800 IPR036291 NAD(P)-binding domain superfamily RYU24_00800 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RYU24_00800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_00830 IPR001173 Glycosyltransferase 2-like RYU24_00830 IPR029044 Nucleotide-diphospho-sugar transferases RYU24_00860 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RYU24_00860 IPR001296 Glycosyl transferase, family 1 RYU24_00880 IPR036291 NAD(P)-binding domain superfamily RYU24_00880 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RYU24_00880 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain RYU24_00890 IPR001509 NAD-dependent epimerase/dehydratase RYU24_00890 IPR036291 NAD(P)-binding domain superfamily RYU24_00890 IPR014710 RmlC-like jelly roll fold RYU24_00890 IPR011051 RmlC-like cupin domain superfamily RYU24_00900 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RYU24_00900 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like RYU24_00910 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RYU24_00920 IPR003362 Bacterial sugar transferase RYU24_00930 IPR005835 Nucleotidyl transferase domain RYU24_00930 IPR029044 Nucleotide-diphospho-sugar transferases RYU24_00930 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RYU24_00940 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RYU24_00940 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_00940 IPR036291 NAD(P)-binding domain superfamily RYU24_00940 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RYU24_00940 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RYU24_00940 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RYU24_00940 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RYU24_00940 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RYU24_00950 IPR001672 Phosphoglucose isomerase (PGI) RYU24_00950 IPR023096 Phosphoglucose isomerase, C-terminal RYU24_00950 IPR035482 Phosphoglucose isomerase, SIS domain 2 RYU24_00950 IPR035476 Phosphoglucose isomerase, SIS domain 1 RYU24_00950 IPR018189 Phosphoglucose isomerase, conserved site RYU24_00960 IPR005886 UDP-glucose 4-epimerase RYU24_00960 IPR036291 NAD(P)-binding domain superfamily RYU24_00960 IPR016040 NAD(P)-binding domain RYU24_00970 IPR038636 Capsule assembly protein Wzi superfamily RYU24_00970 IPR026950 Capsule assembly protein Wzi RYU24_00980 IPR005843 Alpha-D-phosphohexomutase, C-terminal RYU24_00980 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RYU24_00980 IPR016066 Alpha-D-phosphohexomutase, conserved site RYU24_00980 IPR005841 Alpha-D-phosphohexomutase superfamily RYU24_00980 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RYU24_00980 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RYU24_00980 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RYU24_00980 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RYU24_01000 IPR009492 TniQ RYU24_01000 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl RYU24_01010 IPR003593 AAA+ ATPase domain RYU24_01010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_01010 IPR021542 Tn7 transposition regulator TnsC RYU24_01020 IPR001584 Integrase, catalytic core RYU24_01020 IPR012337 Ribonuclease H-like superfamily RYU24_01020 IPR036397 Ribonuclease H superfamily RYU24_01030 IPR011335 Restriction endonuclease type II-like RYU24_01030 IPR014833 TnsA endonuclease, N-terminal RYU24_01030 IPR011856 tRNA endonuclease-like domain superfamily RYU24_01030 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_01030 IPR036390 Winged helix DNA-binding domain superfamily RYU24_01030 IPR014832 TnsA endonuclease C-terminal RYU24_01040 IPR025668 Transposase DDE domain RYU24_01050 IPR001347 Sugar isomerase (SIS) RYU24_01050 IPR029055 Nucleophile aminohydrolases, N-terminal RYU24_01050 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RYU24_01050 IPR017932 Glutamine amidotransferase type 2 domain RYU24_01050 IPR035490 GlmS/FrlB, SIS domain 2 RYU24_01050 IPR035466 GlmS/AgaS, SIS domain 1 RYU24_01060 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RYU24_01060 IPR001451 Hexapeptide repeat RYU24_01060 IPR011004 Trimeric LpxA-like superfamily RYU24_01060 IPR018357 Hexapeptide transferase, conserved site RYU24_01060 IPR025877 MobA-like NTP transferase RYU24_01060 IPR029044 Nucleotide-diphospho-sugar transferases RYU24_01060 IPR038009 GlmU, C-terminal LbH domain RYU24_01070 IPR026037 Phosphatidylglycerophosphatase A RYU24_01070 IPR007686 YutG/PgpA domain RYU24_01070 IPR036681 PgpA-like superfamily RYU24_01080 IPR016188 PurM-like, N-terminal domain RYU24_01080 IPR010918 PurM-like, C-terminal domain RYU24_01080 IPR036921 PurM-like, N-terminal domain superfamily RYU24_01080 IPR006283 Thiamine-monophosphate kinase RYU24_01080 IPR036676 PurM-like, C-terminal domain superfamily RYU24_01090 IPR035926 NusB-like superfamily RYU24_01090 IPR011605 NusB antitermination factor RYU24_01090 IPR006027 NusB/RsmB/TIM44 RYU24_01100 IPR002180 Lumazine/riboflavin synthase RYU24_01100 IPR034964 Lumazine synthase RYU24_01100 IPR036467 Lumazine/riboflavin synthase superfamily RYU24_01110 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RYU24_01110 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RYU24_01110 IPR036144 RibA-like superfamily RYU24_01110 IPR032677 GTP cyclohydrolase II RYU24_01120 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_01120 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_01120 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_01120 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_01120 IPR015590 Aldehyde dehydrogenase domain RYU24_01120 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_01140 IPR031100 LOG family RYU24_01140 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RYU24_01150 IPR018668 DNA-binding protein VF530-like RYU24_01150 IPR036361 SAP domain superfamily RYU24_01170 IPR018946 Alkaline phosphatase D-related RYU24_01170 IPR038607 PhoD-like superfamily RYU24_01170 IPR032093 Phospholipase D, N-terminal RYU24_01170 IPR008963 Purple acid phosphatase-like, N-terminal RYU24_01180 IPR041108 Polyphosphate kinase, C-terminal domain 1 RYU24_01180 IPR003414 Polyphosphate kinase RYU24_01180 IPR024953 Polyphosphate kinase middle domain RYU24_01180 IPR036830 Polyphosphate kinase middle domain superfamily RYU24_01180 IPR025200 Polyphosphate kinase C-terminal domain 2 RYU24_01180 IPR025198 Polyphosphate kinase N-terminal domain RYU24_01180 IPR036832 Polyphosphate kinase N-terminal domain superfamily RYU24_01200 IPR008334 5'-Nucleotidase, C-terminal RYU24_01200 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN RYU24_01200 IPR029052 Metallo-dependent phosphatase-like RYU24_01200 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_01200 IPR036907 5'-Nucleotidase, C-terminal domain superfamily RYU24_01200 IPR006179 5'-Nucleotidase/apyrase RYU24_01200 IPR006146 5'-Nucleotidase, conserved site RYU24_01230 IPR001296 Glycosyl transferase, family 1 RYU24_01230 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RYU24_01300 IPR025161 Putative transposase IS4/IS5 family RYU24_01320 IPR001126 UmuC domain RYU24_01320 IPR025188 Domain of unknown function DUF4113 RYU24_01320 IPR017961 DNA polymerase, Y-family, little finger domain RYU24_01320 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RYU24_01330 IPR015927 Peptidase S24/S26A/S26B/S26C RYU24_01330 IPR006197 Peptidase S24, LexA-like RYU24_01330 IPR036286 LexA/Signal peptidase-like superfamily RYU24_01330 IPR039418 LexA-like RYU24_01340 IPR035895 HPr-like superfamily RYU24_01340 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RYU24_01340 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RYU24_01340 IPR000032 Phosphocarrier protein HPr-like RYU24_01340 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_01340 IPR040442 Pyruvate kinase-like domain superfamily RYU24_01340 IPR002178 PTS EIIA type-2 domain RYU24_01340 IPR036618 PtsI, HPr-binding domain superfamily RYU24_01340 IPR006318 Phosphotransferase system, enzyme I-like RYU24_01340 IPR008731 Phosphotransferase system, enzyme I N-terminal RYU24_01340 IPR036637 Phosphohistidine domain superfamily RYU24_01340 IPR023151 PEP-utilising enzyme, conserved site RYU24_01340 IPR000121 PEP-utilising enzyme, C-terminal RYU24_01340 IPR018274 PEP-utilising enzyme, active site RYU24_01340 IPR008279 PEP-utilising enzyme, mobile domain RYU24_01340 IPR016152 Phosphotransferase/anion transporter RYU24_01350 IPR017583 Tagatose/fructose phosphokinase RYU24_01350 IPR029056 Ribokinase-like RYU24_01350 IPR011611 Carbohydrate kinase PfkB RYU24_01350 IPR022463 Fructose 1-phosphate kinase RYU24_01350 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RYU24_01360 IPR036095 PTS system IIB component-like superfamily RYU24_01360 IPR013011 Phosphotransferase system, EIIB component, type 2 RYU24_01360 IPR003352 Phosphotransferase system, EIIC RYU24_01360 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RYU24_01360 IPR006327 Phosphotransferase system, fructose IIC component RYU24_01360 IPR013014 Phosphotransferase system, EIIC component, type 2 RYU24_01360 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RYU24_01380 IPR022138 Helicase SWF/SNF-related RYU24_01380 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_01380 IPR000330 SNF2-related, N-terminal domain RYU24_01380 IPR038718 SNF2-like, N-terminal domain superfamily RYU24_01380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_01380 IPR001650 Helicase, C-terminal RYU24_01390 IPR017508 HipA, N-terminal subdomain 1 RYU24_01390 IPR012893 HipA-like, C-terminal RYU24_01410 IPR006249 Aconitase/Iron-responsive element-binding protein 2 RYU24_01410 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RYU24_01410 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RYU24_01410 IPR018136 Aconitase family, 4Fe-4S cluster binding site RYU24_01410 IPR036008 Aconitase, iron-sulfur domain RYU24_01410 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RYU24_01410 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RYU24_01430 IPR027806 Harbinger transposase-derived nuclease domain RYU24_01430 IPR027805 Transposase, Helix-turn-helix domain RYU24_01440 IPR024474 Zinc-finger binding domain of transposase IS66 RYU24_01440 IPR039552 Transposase IS66, C-terminal RYU24_01440 IPR024463 Transposase TnpC, homeodomain RYU24_01440 IPR004291 Transposase, IS66 RYU24_01450 IPR011614 Catalase core domain RYU24_01450 IPR020835 Catalase superfamily RYU24_01480 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent RYU24_01480 IPR011251 Luciferase-like domain RYU24_01480 IPR036661 Luciferase-like domain superfamily RYU24_01500 IPR010781 Protein of unknown function DUF1376 RYU24_01570 IPR025669 AAA domain RYU24_01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_01600 IPR032818 DedA family RYU24_01600 IPR032816 SNARE associated Golgi protein RYU24_01610 IPR022310 NAD/GMP synthase RYU24_01610 IPR025777 GMP synthetase ATP pyrophosphatase domain RYU24_01610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_01610 IPR004739 GMP synthase, glutamine amidotransferase RYU24_01610 IPR022955 GMP synthase RYU24_01610 IPR001674 GMP synthase, C-terminal RYU24_01610 IPR029062 Class I glutamine amidotransferase-like RYU24_01610 IPR017926 Glutamine amidotransferase RYU24_01620 IPR025745 Restriction system protein Mrr-like N-terminal domain RYU24_01620 IPR011335 Restriction endonuclease type II-like RYU24_01620 IPR007560 Restriction endonuclease type IV, Mrr RYU24_01630 IPR029787 Nucleotide cyclase RYU24_01630 IPR012292 Globin/Protoglobin RYU24_01630 IPR000160 GGDEF domain RYU24_01630 IPR039435 Diguanylate cyclase DosC, globin sensor domain RYU24_01630 IPR009050 Globin-like superfamily RYU24_01640 IPR033424 Membrane-associated sensor domain RYU24_01640 IPR029787 Nucleotide cyclase RYU24_01640 IPR000160 GGDEF domain RYU24_01650 IPR012093 Pirin RYU24_01650 IPR008778 Pirin, C-terminal domain RYU24_01650 IPR014710 RmlC-like jelly roll fold RYU24_01650 IPR011051 RmlC-like cupin domain superfamily RYU24_01650 IPR003829 Pirin, N-terminal domain RYU24_01680 IPR021766 Phosphate regulon sensor protein PhoR RYU24_01680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_01680 IPR005467 Histidine kinase domain RYU24_01680 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_01680 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_01680 IPR000014 PAS domain RYU24_01680 IPR035965 PAS domain superfamily RYU24_01680 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_01680 IPR013767 PAS fold RYU24_01680 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR RYU24_01680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_01690 IPR011006 CheY-like superfamily RYU24_01690 IPR001867 OmpR/PhoB-type DNA-binding domain RYU24_01690 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_01690 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB RYU24_01690 IPR001789 Signal transduction response regulator, receiver domain RYU24_01690 IPR039420 Transcriptional regulatory protein WalR-like RYU24_01690 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_01710 IPR036291 NAD(P)-binding domain superfamily RYU24_01710 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_01710 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_01730 IPR025668 Transposase DDE domain RYU24_01740 IPR011251 Luciferase-like domain RYU24_01740 IPR036661 Luciferase-like domain superfamily RYU24_01740 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A RYU24_01750 IPR011251 Luciferase-like domain RYU24_01750 IPR036661 Luciferase-like domain superfamily RYU24_01750 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A RYU24_01760 IPR002528 Multi antimicrobial extrusion protein RYU24_01770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_01770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_01770 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_01770 IPR004839 Aminotransferase, class I/classII RYU24_01780 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RYU24_01780 IPR037026 Vgr protein, OB-fold domain superfamily RYU24_01780 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RYU24_01780 IPR006531 Gp5 N-terminal RYU24_01780 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RYU24_01780 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RYU24_01790 IPR038765 Papain-like cysteine peptidase superfamily RYU24_01790 IPR018392 LysM domain RYU24_01790 IPR036779 LysM domain superfamily RYU24_01790 IPR000064 Endopeptidase, NLPC/P60 domain RYU24_01790 IPR003646 SH3-like domain, bacterial-type RYU24_01810 IPR011008 Dimeric alpha-beta barrel RYU24_01810 IPR006314 Dyp-type peroxidase RYU24_01820 IPR004778 Homoserine/Threonine efflux protein RYU24_01820 IPR001123 Amino acid exporter protein, LeuE-type RYU24_01830 IPR007553 Domain of unknown function DUF523 RYU24_01840 IPR037294 ABC transporter, BtuC-like RYU24_01840 IPR001626 ABC transporter, TroCD-like RYU24_01850 IPR003593 AAA+ ATPase domain RYU24_01850 IPR003439 ABC transporter-like RYU24_01850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_01850 IPR017882 Zinc import ATP-binding protein ZnuC RYU24_01850 IPR017871 ABC transporter, conserved site RYU24_01890 IPR000568 ATP synthase, F0 complex, subunit A RYU24_01890 IPR023011 ATP synthase, F0 complex, subunit A, active site RYU24_01890 IPR035908 ATP synthase, F0 complex, subunit A superfamily RYU24_01900 IPR002379 V-ATPase proteolipid subunit C-like domain RYU24_01900 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast RYU24_01900 IPR000454 ATP synthase, F0 complex, subunit C RYU24_01900 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site RYU24_01900 IPR038662 F1F0 ATP synthase subunit C superfamily RYU24_01900 IPR035921 F/V-ATP synthase subunit C superfamily RYU24_01910 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily RYU24_01910 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast RYU24_01910 IPR005864 ATP synthase, F0 complex, subunit b, bacterial RYU24_01920 IPR000711 ATPase, OSCP/delta subunit RYU24_01920 IPR020781 ATPase, OSCP/delta subunit, conserved site RYU24_01920 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily RYU24_01930 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RYU24_01930 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RYU24_01930 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_01930 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RYU24_01930 IPR005294 ATP synthase, F1 complex, alpha subunit RYU24_01930 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RYU24_01930 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily RYU24_01930 IPR000793 ATP synthase, alpha subunit, C-terminal RYU24_01930 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RYU24_01930 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain RYU24_01940 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site RYU24_01940 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily RYU24_01940 IPR000131 ATP synthase, F1 complex, gamma subunit RYU24_01950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_01950 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RYU24_01950 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal RYU24_01950 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RYU24_01950 IPR003593 AAA+ ATPase domain RYU24_01950 IPR005722 ATP synthase, F1 complex, beta subunit RYU24_01950 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RYU24_01950 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RYU24_01960 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit RYU24_01960 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal RYU24_01960 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal RYU24_01960 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily RYU24_01990 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_01990 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_01990 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_01990 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_01990 IPR015590 Aldehyde dehydrogenase domain RYU24_02020 IPR036249 Thioredoxin-like superfamily RYU24_02020 IPR033674 Thioredoxin/glutathione peroxidase BtuE RYU24_02020 IPR000889 Glutathione peroxidase RYU24_02020 IPR029759 Glutathione peroxidase active site RYU24_02020 IPR029760 Glutathione peroxidase conserved site RYU24_02030 IPR033674 Thioredoxin/glutathione peroxidase BtuE RYU24_02030 IPR036249 Thioredoxin-like superfamily RYU24_02030 IPR000889 Glutathione peroxidase RYU24_02030 IPR029759 Glutathione peroxidase active site RYU24_02030 IPR029760 Glutathione peroxidase conserved site RYU24_02040 IPR000620 EamA domain RYU24_02050 IPR006070 YrdC-like domain RYU24_02050 IPR023535 Threonylcarbamoyl-AMP synthase RYU24_02050 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RYU24_02060 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_02060 IPR003488 DNA recombination-mediator protein A RYU24_02060 IPR041614 DprA, winged helix domain RYU24_02080 IPR036821 Peptide deformylase superfamily RYU24_02080 IPR023635 Peptide deformylase RYU24_02110 IPR011701 Major facilitator superfamily RYU24_02110 IPR020846 Major facilitator superfamily domain RYU24_02110 IPR036259 MFS transporter superfamily RYU24_02110 IPR005829 Sugar transporter, conserved site RYU24_02120 IPR006638 Elp3/MiaB/NifB RYU24_02120 IPR013704 Uncharacterised protein family UPF0313, N-terminal RYU24_02120 IPR024560 Uncharacterised protein family UPF0313, C-terminal RYU24_02120 IPR020612 Methylthiotransferase, conserved site RYU24_02120 IPR023404 Radical SAM, alpha/beta horseshoe RYU24_02120 IPR007197 Radical SAM RYU24_02120 IPR022946 Uncharacterised protein family UPF0313 RYU24_02150 IPR011701 Major facilitator superfamily RYU24_02150 IPR020846 Major facilitator superfamily domain RYU24_02150 IPR005828 Major facilitator, sugar transporter-like RYU24_02150 IPR036259 MFS transporter superfamily RYU24_02150 IPR004736 MFS transporter, metabolite:H symporter RYU24_02150 IPR005829 Sugar transporter, conserved site RYU24_02160 IPR017961 DNA polymerase, Y-family, little finger domain RYU24_02160 IPR022880 DNA polymerase IV RYU24_02160 IPR024728 DNA polymerase type-Y, HhH motif RYU24_02160 IPR001126 UmuC domain RYU24_02160 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RYU24_02170 IPR002053 Glycoside hydrolase, family 25 RYU24_02170 IPR008270 Glycoside hydrolase, family 25, active site RYU24_02170 IPR018077 Glycoside hydrolase, family 25 subgroup RYU24_02170 IPR017853 Glycoside hydrolase superfamily RYU24_02180 IPR020846 Major facilitator superfamily domain RYU24_02180 IPR023721 Multidrug resistance protein MdtD RYU24_02180 IPR036259 MFS transporter superfamily RYU24_02180 IPR011701 Major facilitator superfamily RYU24_02200 IPR031100 LOG family RYU24_02200 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RYU24_02210 IPR005170 Transporter-associated domain RYU24_02210 IPR036318 FAD-binding, type PCMH-like superfamily RYU24_02210 IPR016169 FAD-binding, type PCMH, subdomain 2 RYU24_02210 IPR005496 Integral membrane protein TerC RYU24_02210 IPR000644 CBS domain RYU24_02220 IPR032710 NTF2-like domain superfamily RYU24_02220 IPR004027 SEC-C motif RYU24_02220 IPR023006 Uncharacterised protein family UPF0225 RYU24_02230 IPR005115 Uncharacterised domain UPF0126 RYU24_02240 IPR036259 MFS transporter superfamily RYU24_02240 IPR020846 Major facilitator superfamily domain RYU24_02240 IPR005829 Sugar transporter, conserved site RYU24_02240 IPR011701 Major facilitator superfamily RYU24_02250 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat RYU24_02250 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RYU24_02250 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RYU24_02250 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RYU24_02250 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RYU24_02250 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RYU24_02250 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RYU24_02260 IPR042099 AMP-dependent synthetase-like superfamily RYU24_02260 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_02260 IPR020845 AMP-binding, conserved site RYU24_02260 IPR000873 AMP-dependent synthetase/ligase RYU24_02290 IPR008162 Inorganic pyrophosphatase RYU24_02290 IPR036649 Inorganic pyrophosphatase superfamily RYU24_02320 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_02320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02320 IPR003593 AAA+ ATPase domain RYU24_02320 IPR025158 Mg chelatase-related protein, C-terminal domain RYU24_02320 IPR004482 Mg chelatase-related protein RYU24_02320 IPR001208 MCM domain RYU24_02320 IPR000523 Magnesium chelatase ChlI domain RYU24_02340 IPR001584 Integrase, catalytic core RYU24_02340 IPR012337 Ribonuclease H-like superfamily RYU24_02340 IPR036397 Ribonuclease H superfamily RYU24_02450 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RYU24_02450 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_02450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02450 IPR000523 Magnesium chelatase ChlI domain RYU24_02450 IPR025158 Mg chelatase-related protein, C-terminal domain RYU24_02450 IPR003593 AAA+ ATPase domain RYU24_02450 IPR004482 Mg chelatase-related protein RYU24_02470 IPR002187 Nitrogen regulatory protein PII RYU24_02470 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RYU24_02470 IPR017918 Nitrogen regulatory protein PII, conserved site RYU24_02470 IPR002332 Nitrogen regulatory protein P-II, urydylation site RYU24_02470 IPR011322 Nitrogen regulatory PII-like, alpha/beta RYU24_02480 IPR024041 Ammonium transporter AmtB-like domain RYU24_02480 IPR018047 Ammonium transporter, conserved site RYU24_02480 IPR001905 Ammonium transporter RYU24_02480 IPR029020 Ammonium/urea transporter RYU24_02490 IPR005144 ATP-cone domain RYU24_02490 IPR003796 Ribonucleotide reductase regulator NrdR-like RYU24_02500 IPR016192 APOBEC/CMP deaminase, zinc-binding RYU24_02500 IPR002125 Cytidine and deoxycytidylate deaminase domain RYU24_02500 IPR016193 Cytidine deaminase-like RYU24_02500 IPR024072 Dihydrofolate reductase-like domain superfamily RYU24_02500 IPR004794 Riboflavin biosynthesis protein RibD RYU24_02500 IPR011549 Riboflavin-specific deaminase, C-terminal RYU24_02500 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RYU24_02520 IPR026017 Lumazine-binding domain RYU24_02520 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RYU24_02520 IPR001783 Lumazine-binding protein RYU24_02520 IPR017938 Riboflavin synthase-like beta-barrel RYU24_02530 IPR032818 DedA family RYU24_02530 IPR032816 SNARE associated Golgi protein RYU24_02560 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RYU24_02560 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RYU24_02560 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B RYU24_02560 IPR023042 Peptidase M17, leucine aminopeptidase RYU24_02570 IPR005495 Permease LptG/LptF-related RYU24_02570 IPR030922 LPS export ABC transporter permease LptF RYU24_02580 IPR030923 LPS export ABC transporter permease LptG RYU24_02580 IPR005495 Permease LptG/LptF-related RYU24_02590 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent RYU24_02590 IPR017850 Alkaline-phosphatase-like, core domain superfamily RYU24_02590 IPR011258 BPG-independent PGAM, N-terminal RYU24_02590 IPR006124 Metalloenzyme RYU24_02590 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily RYU24_02600 IPR005151 Tail specific protease RYU24_02600 IPR029045 ClpP/crotonase-like domain superfamily RYU24_02600 IPR001478 PDZ domain RYU24_02600 IPR036034 PDZ superfamily RYU24_02600 IPR004447 C-terminal-processing peptidase S41A RYU24_02610 IPR009057 Homeobox-like domain superfamily RYU24_02610 IPR003593 AAA+ ATPase domain RYU24_02610 IPR025944 Sigma-54 interaction domain, conserved site RYU24_02610 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RYU24_02610 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RYU24_02610 IPR002078 RNA polymerase sigma factor 54 interaction domain RYU24_02610 IPR001789 Signal transduction response regulator, receiver domain RYU24_02610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02610 IPR002197 DNA binding HTH domain, Fis-type RYU24_02610 IPR011006 CheY-like superfamily RYU24_02620 IPR036249 Thioredoxin-like superfamily RYU24_02620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_02620 IPR023527 Adaptive-response sensory-kinase SasA RYU24_02620 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_02620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_02620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_02620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_02620 IPR005467 Histidine kinase domain RYU24_02620 IPR011649 KaiB domain RYU24_02630 IPR000792 Transcription regulator LuxR, C-terminal RYU24_02630 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_02630 IPR011006 CheY-like superfamily RYU24_02630 IPR001789 Signal transduction response regulator, receiver domain RYU24_02640 IPR012338 Beta-lactamase/transpeptidase-like RYU24_02640 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RYU24_02640 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RYU24_02650 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RYU24_02650 IPR026260 Threonine synthase, bacterial/archaeal RYU24_02650 IPR004450 Threonine synthase-like RYU24_02650 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RYU24_02650 IPR001926 Pyridoxal-phosphate dependent enzyme RYU24_02660 IPR002912 ACT domain RYU24_02660 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RYU24_02660 IPR016204 Homoserine dehydrogenase RYU24_02660 IPR001342 Homoserine dehydrogenase, catalytic RYU24_02660 IPR036291 NAD(P)-binding domain superfamily RYU24_02660 IPR019811 Homoserine dehydrogenase, conserved site RYU24_02670 IPR033954 Disulphide bond isomerase, DsbC/G RYU24_02670 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RYU24_02670 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily RYU24_02670 IPR012336 Thioredoxin-like fold RYU24_02670 IPR036249 Thioredoxin-like superfamily RYU24_02670 IPR017937 Thioredoxin, conserved site RYU24_02670 IPR013766 Thioredoxin domain RYU24_02680 IPR011932 Tyrosine recombinase XerD RYU24_02680 IPR023009 Tyrosine recombinase XerC/XerD RYU24_02680 IPR011010 DNA breaking-rejoining enzyme, catalytic core RYU24_02680 IPR002104 Integrase, catalytic domain RYU24_02680 IPR010998 Integrase/recombinase, N-terminal RYU24_02680 IPR004107 Integrase, SAM-like, N-terminal RYU24_02680 IPR013762 Integrase-like, catalytic domain superfamily RYU24_02700 IPR003373 Ferrous iron transport protein B RYU24_02700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02700 IPR006073 GTP binding domain RYU24_02700 IPR011640 Ferrous iron transport protein B, C-terminal RYU24_02700 IPR030389 FeoB-type guanine nucleotide-binding (G) domain RYU24_02700 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain RYU24_02720 IPR036565 Mur-like, catalytic domain superfamily RYU24_02720 IPR004101 Mur ligase, C-terminal RYU24_02720 IPR036615 Mur ligase, C-terminal domain superfamily RYU24_02720 IPR013221 Mur ligase, central RYU24_02720 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RYU24_02730 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RYU24_02730 IPR013437 Probable peptidoglycan glycosyltransferase FtsW RYU24_02730 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RYU24_02740 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RYU24_02740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_02740 IPR022380 Glutamyl-Q tRNA(Asp) synthetase RYU24_02740 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RYU24_02750 IPR012784 RNA polymerase-binding transcription factor DksA RYU24_02750 IPR037187 DksA, N-terminal domain superfamily RYU24_02750 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RYU24_02750 IPR000962 Zinc finger, DksA/TraR C4-type RYU24_02750 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RYU24_02760 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_02760 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RYU24_02760 IPR029052 Metallo-dependent phosphatase-like RYU24_02770 IPR004385 Nucleoside diphosphate pyrophosphatase RYU24_02770 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_02770 IPR020084 NUDIX hydrolase, conserved site RYU24_02770 IPR000086 NUDIX hydrolase domain RYU24_02780 IPR038521 ThiC/Bza superfamily RYU24_02780 IPR037509 Phosphomethylpyrimidine synthase RYU24_02780 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B RYU24_02780 IPR025747 ThiC-associated domain RYU24_02800 IPR003423 Outer membrane efflux protein RYU24_02800 IPR010130 Type I secretion outer membrane protein, TolC RYU24_02810 IPR028366 Phosphate transport system protein PhoU RYU24_02810 IPR038078 PhoU-like domain superfamily RYU24_02810 IPR026022 PhoU domain RYU24_02820 IPR003593 AAA+ ATPase domain RYU24_02820 IPR011527 ABC transporter type 1, transmembrane domain RYU24_02820 IPR036640 ABC transporter type 1, transmembrane domain superfamily RYU24_02820 IPR003439 ABC transporter-like RYU24_02820 IPR039421 Type I protein exporter RYU24_02820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02820 IPR017871 ABC transporter, conserved site RYU24_02840 IPR012337 Ribonuclease H-like superfamily RYU24_02840 IPR005227 Putative pre-16S rRNA nuclease RYU24_02840 IPR006641 YqgF/RNase H-like domain RYU24_02840 IPR037027 YqgF/RNase H-like domain superfamily RYU24_02850 IPR003774 Protein of unknown function UPF0301 RYU24_02860 IPR025668 Transposase DDE domain RYU24_02910 IPR003395 RecF/RecN/SMC, N-terminal RYU24_02910 IPR004604 DNA recombination/repair protein RecN RYU24_02910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02920 IPR011051 RmlC-like cupin domain superfamily RYU24_02920 IPR009664 Pyrimidine/purine nucleoside phosphorylase RYU24_02920 IPR014710 RmlC-like jelly roll fold RYU24_02930 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_02930 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RYU24_02930 IPR029028 Alpha/beta knot methyltransferases RYU24_02930 IPR004441 RNA methyltransferase TrmH family RYU24_02930 IPR001537 tRNA/rRNA methyltransferase, SpoU type RYU24_02930 IPR029064 50S ribosomal protein L30e-like RYU24_02930 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RYU24_02950 IPR001977 Dephospho-CoA kinase RYU24_02950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02960 IPR010627 Peptidase A24A, N-terminal RYU24_02960 IPR014032 Peptidase A24A, prepilin type IV, bacterial RYU24_02960 IPR000045 Prepilin type IV endopeptidase, peptidase domain RYU24_02970 IPR001992 Type II secretion system conserved site RYU24_02970 IPR018076 Type II secretion system F domain RYU24_02970 IPR003004 GspF/PilC family RYU24_02970 IPR042094 Type II secretion system F domain superfamily RYU24_02980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_02980 IPR001482 Type II/IV secretion system protein RYU24_02980 IPR037257 General secretory system II, protein E, N-terminal superfamily RYU24_02980 IPR007831 General secretory system II, protein E, N-terminal RYU24_02980 IPR042181 Type II secretion system, protein E, N-terminal RYU24_02980 IPR013374 ATPase, type IV, pilus assembly, PilB RYU24_02990 IPR013785 Aldolase-type TIM barrel RYU24_02990 IPR035990 Triosephosphate isomerase superfamily RYU24_02990 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RYU24_02990 IPR020861 Triosephosphate isomerase, active site RYU24_02990 IPR000652 Triosephosphate isomerase RYU24_03000 IPR004692 Preprotein translocase SecG subunit RYU24_03010 IPR003728 Ribosome maturation factor RimP RYU24_03010 IPR028998 Ribosome maturation factor RimP, C-terminal RYU24_03010 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily RYU24_03010 IPR028989 Ribosome maturation factor RimP, N-terminal RYU24_03010 IPR035956 RimP, N-terminal domain superfamily RYU24_03020 IPR013735 Transcription factor NusA, N-terminal RYU24_03020 IPR010214 Transcription termination factor NusA, C-terminal duplication RYU24_03020 IPR010213 Transcription termination factor NusA RYU24_03020 IPR003029 S1 domain RYU24_03020 IPR022967 RNA-binding domain, S1 RYU24_03020 IPR036555 NusA, N-terminal domain superfamily RYU24_03020 IPR012340 Nucleic acid-binding, OB-fold RYU24_03020 IPR009019 K homology domain superfamily, prokaryotic type RYU24_03020 IPR025249 KH domain, NusA-like RYU24_03020 IPR015946 K homology domain-like, alpha/beta RYU24_03020 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RYU24_03020 IPR030842 Transcription termination/antitermination protein NusA, bacterial RYU24_03030 IPR023115 Translation initiation factor IF- 2, domain 3 RYU24_03030 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_03030 IPR036925 Translation initiation factor IF-2, domain 3 superfamily RYU24_03030 IPR015760 Translation initiation factor IF- 2 RYU24_03030 IPR000178 Translation initiation factor aIF-2, bacterial-like RYU24_03030 IPR000795 Transcription factor, GTP-binding domain RYU24_03030 IPR009061 Putative DNA-binding domain superfamily RYU24_03030 IPR006847 Translation initiation factor IF-2, N-terminal RYU24_03030 IPR013575 Initiation factor 2 associated domain, bacterial RYU24_03030 IPR005225 Small GTP-binding protein domain RYU24_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_03040 IPR015946 K homology domain-like, alpha/beta RYU24_03040 IPR000238 Ribosome-binding factor A RYU24_03040 IPR023799 Ribosome-binding factor A domain superfamily RYU24_03050 IPR005133 Na+/H+ antiporter subunit G RYU24_03060 IPR007208 Na(+)/H(+) antiporter subunit F-like RYU24_03070 IPR002758 Na+/H+ antiporter subunit E RYU24_03080 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RYU24_03080 IPR004775 Na(+)/H(+) antiporter subunit D1 RYU24_03090 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RYU24_03090 IPR006673 Mnh complex subunit C1 RYU24_03100 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RYU24_03100 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RYU24_03100 IPR005663 Monovalent cation proton antiporter subunit A RYU24_03100 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RYU24_03100 IPR025383 Domain of unknown function DUF4040 RYU24_03100 IPR005281 Monovalent cation:proton antiporter, subunit B RYU24_03130 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily RYU24_03130 IPR026660 Phosphoribosyl-AMP cyclohydrolase RYU24_03130 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RYU24_03140 IPR036291 NAD(P)-binding domain superfamily RYU24_03140 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_03140 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_03150 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RYU24_03150 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase RYU24_03150 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_03150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_03150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_03160 IPR022374 Energy-dependent translational throttle protein EttA RYU24_03160 IPR017871 ABC transporter, conserved site RYU24_03160 IPR003593 AAA+ ATPase domain RYU24_03160 IPR032781 ABC-transporter extension domain RYU24_03160 IPR003439 ABC transporter-like RYU24_03180 IPR025161 Putative transposase IS4/IS5 family RYU24_03220 IPR039426 Vitamin B12 transporter BtuB-like RYU24_03220 IPR012910 TonB-dependent receptor, plug domain RYU24_03220 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_03220 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_03250 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RYU24_03250 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RYU24_03250 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RYU24_03250 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RYU24_03250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_03250 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_03250 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RYU24_03250 IPR033910 Glutamyl-tRNA synthetase RYU24_03270 IPR000957 Sulphate/thiosulphate-binding, conserved site RYU24_03270 IPR034408 Sulphate/thiosulphate-binding site RYU24_03270 IPR005669 Thiosulphate/Sulfate-binding protein RYU24_03280 IPR000957 Sulphate/thiosulphate-binding, conserved site RYU24_03280 IPR034408 Sulphate/thiosulphate-binding site RYU24_03280 IPR005669 Thiosulphate/Sulfate-binding protein RYU24_03290 IPR000957 Sulphate/thiosulphate-binding, conserved site RYU24_03290 IPR034408 Sulphate/thiosulphate-binding site RYU24_03290 IPR005669 Thiosulphate/Sulfate-binding protein RYU24_03300 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily RYU24_03300 IPR002903 Ribosomal RNA small subunit methyltransferase H RYU24_03300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_03320 IPR012338 Beta-lactamase/transpeptidase-like RYU24_03320 IPR037532 Peptidoglycan D,D-transpeptidase FtsI RYU24_03320 IPR005311 Penicillin-binding protein, dimerisation domain RYU24_03320 IPR036138 Penicillin-binding protein, dimerisation domain superfamily RYU24_03320 IPR001460 Penicillin-binding protein, transpeptidase RYU24_03330 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RYU24_03330 IPR000713 Mur ligase, N-terminal catalytic domain RYU24_03330 IPR013221 Mur ligase, central RYU24_03330 IPR035911 MurE/MurF, N-terminal RYU24_03330 IPR004101 Mur ligase, C-terminal RYU24_03330 IPR036565 Mur-like, catalytic domain superfamily RYU24_03330 IPR036615 Mur ligase, C-terminal domain superfamily RYU24_03340 IPR004101 Mur ligase, C-terminal RYU24_03340 IPR036615 Mur ligase, C-terminal domain superfamily RYU24_03340 IPR013221 Mur ligase, central RYU24_03340 IPR000713 Mur ligase, N-terminal catalytic domain RYU24_03340 IPR035911 MurE/MurF, N-terminal RYU24_03340 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase RYU24_03340 IPR036565 Mur-like, catalytic domain superfamily RYU24_03350 IPR000715 Glycosyl transferase, family 4 RYU24_03350 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RYU24_03350 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RYU24_03360 IPR025714 Methyltransferase domain RYU24_03360 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted RYU24_03360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_03370 IPR031376 Penicillin-binding protein, OB-like domain RYU24_03370 IPR001460 Penicillin-binding protein, transpeptidase RYU24_03370 IPR023346 Lysozyme-like domain superfamily RYU24_03370 IPR001264 Glycosyl transferase, family 51 RYU24_03370 IPR036950 Penicillin binding protein transglycosylase domain RYU24_03370 IPR012338 Beta-lactamase/transpeptidase-like RYU24_03380 IPR005883 Type IV pilus assembly protein PilM RYU24_03380 IPR003494 SHS2 domain inserted in FtsA RYU24_03390 IPR007813 Fimbrial assembly PilN RYU24_03400 IPR007445 Pilus assembly protein, PilO RYU24_03400 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RYU24_03420 IPR001775 GspD/PilQ family RYU24_03420 IPR021731 AMIN domain RYU24_03420 IPR005644 NolW-like RYU24_03420 IPR013355 Type IV pilus secretin PilQ RYU24_03420 IPR011662 Secretin/TonB, short N-terminal domain RYU24_03420 IPR004846 Type II/III secretion system RYU24_03420 IPR004845 Type II secretion system GspD, conserved site RYU24_03420 IPR038591 NolW-like superfamily RYU24_03430 IPR023000 Shikimate kinase, conserved site RYU24_03430 IPR031322 Shikimate kinase/gluconokinase RYU24_03430 IPR000623 Shikimate kinase/Threonine synthase-like 1 RYU24_03430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_03440 IPR016037 3-dehydroquinate synthase AroB RYU24_03440 IPR030963 3-dehydroquinate synthase family RYU24_03440 IPR030960 3-dehydroquinate synthase domain RYU24_03460 IPR029055 Nucleophile aminohydrolases, N-terminal RYU24_03460 IPR002932 Glutamate synthase domain RYU24_03460 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily RYU24_03460 IPR002489 Glutamate synthase, alpha subunit, C-terminal RYU24_03460 IPR017932 Glutamine amidotransferase type 2 domain RYU24_03460 IPR013785 Aldolase-type TIM barrel RYU24_03460 IPR006982 Glutamate synthase, central-N RYU24_03470 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_03470 IPR023753 FAD/NAD(P)-binding domain RYU24_03470 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 RYU24_03470 IPR009051 Alpha-helical ferredoxin RYU24_03470 IPR028261 Dihydroprymidine dehydrogenase domain II RYU24_03480 IPR023353 LemA-like domain superfamily RYU24_03480 IPR007156 LemA RYU24_03570 IPR012902 Prokaryotic N-terminal methylation site RYU24_03570 IPR001082 Fimbrial protein pilin RYU24_03590 IPR012902 Prokaryotic N-terminal methylation site RYU24_03590 IPR001082 Fimbrial protein pilin RYU24_03610 IPR021797 Virulence factor membrane-bound polymerase, C-terminal RYU24_03610 IPR031726 Protein glycosylation ligase domain RYU24_03610 IPR007016 O-antigen ligase-related RYU24_03620 IPR008331 Ferritin/DPS protein domain RYU24_03620 IPR009078 Ferritin-like superfamily RYU24_03620 IPR009040 Ferritin-like diiron domain RYU24_03620 IPR012347 Ferritin-like RYU24_03620 IPR002024 Bacterioferritin RYU24_03630 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RYU24_03630 IPR007419 BFD-like [2Fe-2S]-binding domain RYU24_03650 IPR006175 YjgF/YER057c/UK114 family RYU24_03650 IPR035959 RutC-like superfamily RYU24_03650 IPR019897 RidA, conserved site RYU24_03650 IPR006056 RidA family RYU24_03660 IPR021027 Transposase, putative, helix-turn-helix domain RYU24_03660 IPR010095 Transposase IS605, OrfB, C-terminal RYU24_03660 IPR001959 Probable transposase, IS891/IS1136/IS1341 RYU24_03670 IPR033655 RelA, TGS domain RYU24_03670 IPR012676 TGS-like RYU24_03670 IPR002912 ACT domain RYU24_03670 IPR012675 Beta-grasp domain superfamily RYU24_03670 IPR003607 HD/PDEase domain RYU24_03670 IPR004811 RelA/SpoT family RYU24_03670 IPR007685 RelA/SpoT RYU24_03670 IPR004095 TGS RYU24_03680 IPR006110 RNA polymerase, subunit omega/K/RPB6 RYU24_03680 IPR003716 DNA-directed RNA polymerase, omega subunit RYU24_03680 IPR012293 RNA polymerase subunit, RPB6/omega RYU24_03680 IPR036161 RPB6/omega subunit-like superfamily RYU24_03690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_03690 IPR020590 Guanylate kinase, conserved site RYU24_03690 IPR017665 Guanylate kinase RYU24_03690 IPR008144 Guanylate kinase-like domain RYU24_03690 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RYU24_03700 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RYU24_03710 IPR001082 Fimbrial protein pilin RYU24_03710 IPR012902 Prokaryotic N-terminal methylation site RYU24_03710 IPR000983 Bacterial general secretion pathway protein G-type pilin RYU24_03780 IPR023803 Ribosomal protein S16 domain superfamily RYU24_03780 IPR020592 Ribosomal protein S16, conserved site RYU24_03780 IPR000307 Ribosomal protein S16 RYU24_03790 IPR027275 PRC-barrel domain RYU24_03790 IPR011033 PRC-barrel-like superfamily RYU24_03790 IPR002676 RimM, N-terminal RYU24_03790 IPR036976 RimM, N-terminal domain superfamily RYU24_03790 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_03790 IPR011961 16S rRNA processing protein RimM RYU24_03800 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RYU24_03800 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RYU24_03800 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RYU24_03800 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_03800 IPR029028 Alpha/beta knot methyltransferases RYU24_03810 IPR008991 Translation protein SH3-like domain superfamily RYU24_03810 IPR001857 Ribosomal protein L19 RYU24_03810 IPR038657 Ribosomal protein L19 superfamily RYU24_03810 IPR018257 Ribosomal protein L19, conserved site RYU24_03820 IPR029058 Alpha/Beta hydrolase fold RYU24_03820 IPR000073 Alpha/beta hydrolase fold-1 RYU24_03830 IPR029058 Alpha/Beta hydrolase fold RYU24_03830 IPR000073 Alpha/beta hydrolase fold-1 RYU24_03840 IPR004961 Lipase chaperone RYU24_03850 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_03850 IPR002501 Pseudouridine synthase II, N-terminal RYU24_03850 IPR015947 PUA-like superfamily RYU24_03850 IPR014780 tRNA pseudouridine synthase II, TruB RYU24_03850 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal RYU24_03850 IPR032819 tRNA pseudouridylate synthase B, C-terminal RYU24_03860 IPR002781 Transmembrane protein TauE-like RYU24_03880 IPR000620 EamA domain RYU24_03910 IPR000620 EamA domain RYU24_03930 IPR002912 ACT domain RYU24_03930 IPR036291 NAD(P)-binding domain superfamily RYU24_03930 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RYU24_03930 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RYU24_03930 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RYU24_03930 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RYU24_03940 IPR016164 FAD-linked oxidase-like, C-terminal RYU24_03940 IPR004113 FAD-linked oxidase, C-terminal RYU24_03940 IPR004490 Glycolate oxidase subunit GlcD RYU24_03940 IPR006094 FAD linked oxidase, N-terminal RYU24_03940 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RYU24_03940 IPR036318 FAD-binding, type PCMH-like superfamily RYU24_03940 IPR016166 FAD-binding domain, PCMH-type RYU24_03970 IPR005829 Sugar transporter, conserved site RYU24_03970 IPR036259 MFS transporter superfamily RYU24_03970 IPR011701 Major facilitator superfamily RYU24_03970 IPR020846 Major facilitator superfamily domain RYU24_03980 IPR023845 Domain of unknown function DUF3817, transmembrane RYU24_03990 IPR010019 Integral membrane protein, YccS RYU24_03990 IPR010020 Integral membrane protein, YccS/YhfK RYU24_03990 IPR032692 Integral membrane protein YccS, N-terminal RYU24_04000 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily RYU24_04000 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone RYU24_04000 IPR018152 Superoxide dismutase, copper/zinc, binding site RYU24_04000 IPR001424 Superoxide dismutase, copper/zinc binding domain RYU24_04010 IPR002549 Transmembrane protein TqsA-like RYU24_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_04020 IPR025669 AAA domain RYU24_04050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_04050 IPR004033 UbiE/COQ5 methyltransferase RYU24_04050 IPR023576 UbiE/COQ5 methyltransferase, conserved site RYU24_04080 IPR003691 Putative fluoride ion transporter CrcB RYU24_04090 IPR034704 L28p-like RYU24_04090 IPR002150 Ribosomal protein L31 RYU24_04090 IPR027493 Ribosomal protein L31 type B RYU24_04090 IPR042105 Ribosomal protein L31 superfamily RYU24_04100 IPR011009 Protein kinase-like domain superfamily RYU24_04100 IPR000719 Protein kinase domain RYU24_04100 IPR004147 UbiB domain RYU24_04120 IPR002528 Multi antimicrobial extrusion protein RYU24_04140 IPR010723 HemN, C-terminal RYU24_04140 IPR004559 Heme chaperone HemW-like RYU24_04140 IPR007197 Radical SAM RYU24_04140 IPR023404 Radical SAM, alpha/beta horseshoe RYU24_04140 IPR006638 Elp3/MiaB/NifB RYU24_04140 IPR034505 Anaerobic coproporphyrinogen-III oxidase RYU24_04160 IPR011129 Cold shock domain RYU24_04160 IPR002059 Cold-shock protein, DNA-binding RYU24_04160 IPR012340 Nucleic acid-binding, OB-fold RYU24_04160 IPR012156 Cold shock, CspA RYU24_04170 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RYU24_04170 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_04170 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_04170 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_04170 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_04170 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_04170 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_04180 IPR022893 Shikimate dehydrogenase family RYU24_04180 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RYU24_04180 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RYU24_04180 IPR041121 SDH, C-terminal RYU24_04180 IPR036291 NAD(P)-binding domain superfamily RYU24_04180 IPR011342 Shikimate dehydrogenase RYU24_04200 IPR001260 Coproporphyrinogen III oxidase, aerobic RYU24_04200 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily RYU24_04200 IPR018375 Coproporphyrinogen III oxidase, conserved site RYU24_04210 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN RYU24_04210 IPR034505 Anaerobic coproporphyrinogen-III oxidase RYU24_04210 IPR006638 Elp3/MiaB/NifB RYU24_04210 IPR010723 HemN, C-terminal RYU24_04210 IPR007197 Radical SAM RYU24_04210 IPR023404 Radical SAM, alpha/beta horseshoe RYU24_04220 IPR036144 RibA-like superfamily RYU24_04220 IPR000926 GTP cyclohydrolase II, RibA RYU24_04220 IPR032677 GTP cyclohydrolase II RYU24_04230 IPR005477 Deoxyxylulose-5-phosphate synthase RYU24_04230 IPR029061 Thiamin diphosphate-binding fold RYU24_04230 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RYU24_04230 IPR005475 Transketolase-like, pyrimidine-binding domain RYU24_04230 IPR020826 Transketolase binding site RYU24_04230 IPR033248 Transketolase, C-terminal domain RYU24_04240 IPR020550 Inositol monophosphatase, conserved site RYU24_04240 IPR022337 Inositol monophosphatase, SuhB RYU24_04240 IPR020583 Inositol monophosphatase, metal-binding site RYU24_04240 IPR033942 Inositol monophosphatase RYU24_04240 IPR000760 Inositol monophosphatase-like RYU24_04250 IPR011545 DEAD/DEAH box helicase domain RYU24_04250 IPR028622 ATP-dependent RNA helicase RhlE RYU24_04250 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_04250 IPR001650 Helicase, C-terminal RYU24_04250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_04250 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RYU24_04250 IPR014014 RNA helicase, DEAD-box type, Q motif RYU24_04260 IPR003439 ABC transporter-like RYU24_04260 IPR017871 ABC transporter, conserved site RYU24_04260 IPR003593 AAA+ ATPase domain RYU24_04260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_04260 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl RYU24_04270 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RYU24_04270 IPR030802 ABC transporter permease MalE RYU24_04280 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD RYU24_04280 IPR003399 Mce/MlaD RYU24_04290 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RYU24_04290 IPR042245 Tgt2/MlaC superfamily RYU24_04310 IPR004488 Magnesium/cobalt transport protein CorA RYU24_04310 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RYU24_04320 IPR031100 LOG family RYU24_04320 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RYU24_04340 IPR029057 Phosphoribosyltransferase-like RYU24_04340 IPR000836 Phosphoribosyltransferase domain RYU24_04340 IPR005222 Competence protein ComF RYU24_04350 IPR004609 ATP-dependent DNA helicase RecG RYU24_04350 IPR011545 DEAD/DEAH box helicase domain RYU24_04350 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_04350 IPR001650 Helicase, C-terminal RYU24_04350 IPR012340 Nucleic acid-binding, OB-fold RYU24_04350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_04350 IPR033454 RecG, wedge domain RYU24_04380 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB RYU24_04380 IPR002123 Phospholipid/glycerol acyltransferase RYU24_04380 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase RYU24_04380 IPR041728 GPAT/DHAPAT, acyltransferase domain RYU24_04390 IPR003703 Acyl-CoA thioesterase RYU24_04390 IPR029069 HotDog domain superfamily RYU24_04400 IPR034703 Proton/glutamate-aspartate symporter GltP RYU24_04400 IPR033380 Glutamate-aspartate symport protein GltP/GltT RYU24_04400 IPR001991 Sodium:dicarboxylate symporter RYU24_04400 IPR018107 Sodium:dicarboxylate symporter, conserved site RYU24_04400 IPR036458 Sodium:dicarboxylate symporter superfamily RYU24_04440 IPR030393 EngB-type guanine nucleotide-binding (G) domain RYU24_04440 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RYU24_04440 IPR006073 GTP binding domain RYU24_04440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_04450 IPR036390 Winged helix DNA-binding domain superfamily RYU24_04450 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_04450 IPR030489 Transcription regulator Rrf2-type, conserved site RYU24_04450 IPR000944 Transcription regulator Rrf2-type RYU24_04460 IPR017938 Riboflavin synthase-like beta-barrel RYU24_04460 IPR000971 Globin RYU24_04460 IPR023950 Flavohemoprotein RYU24_04460 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RYU24_04460 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_04460 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_04460 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_04460 IPR012292 Globin/Protoglobin RYU24_04460 IPR009050 Globin-like superfamily RYU24_04470 IPR033186 Helicase HerA-like C-terminal RYU24_04470 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_04480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_04480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_04480 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_04480 IPR006233 Cystathionine beta-lyase, bacterial RYU24_04480 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RYU24_04490 IPR017926 Glutamine amidotransferase RYU24_04490 IPR029062 Class I glutamine amidotransferase-like RYU24_04500 IPR001848 Ribosomal protein S10 RYU24_04500 IPR036838 Ribosomal protein S10 domain superfamily RYU24_04500 IPR027486 Ribosomal protein S10 domain RYU24_04500 IPR018268 Ribosomal protein S10, conserved site RYU24_04510 IPR000597 Ribosomal protein L3 RYU24_04510 IPR019927 Ribosomal protein L3, bacterial/organelle-type RYU24_04510 IPR019926 Ribosomal protein L3, conserved site RYU24_04510 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_04520 IPR002136 Ribosomal protein L4/L1e RYU24_04520 IPR023574 Ribosomal protein L4 domain superfamily RYU24_04520 IPR013005 50S ribosomal protein uL4 RYU24_04530 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RYU24_04530 IPR012678 Ribosomal protein L23/L15e core domain superfamily RYU24_04530 IPR013025 Ribosomal protein L25/L23 RYU24_04540 IPR012340 Nucleic acid-binding, OB-fold RYU24_04540 IPR022666 Ribosomal Proteins L2, RNA binding domain RYU24_04540 IPR008991 Translation protein SH3-like domain superfamily RYU24_04540 IPR002171 Ribosomal protein L2 RYU24_04540 IPR005880 Ribosomal protein L2, bacterial/organellar-type RYU24_04540 IPR022669 Ribosomal protein L2, C-terminal RYU24_04540 IPR014726 Ribosomal protein L2, domain 3 RYU24_04540 IPR014722 Ribosomal protein L2, domain 2 RYU24_04550 IPR005732 Ribosomal protein S19, bacterial-type RYU24_04550 IPR002222 Ribosomal protein S19/S15 RYU24_04550 IPR023575 Ribosomal protein S19, superfamily RYU24_04550 IPR020934 Ribosomal protein S19 conserved site RYU24_04560 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RYU24_04560 IPR036394 Ribosomal protein L22/L17 superfamily RYU24_04560 IPR018260 Ribosomal protein L22/L17, conserved site RYU24_04560 IPR001063 Ribosomal protein L22/L17 RYU24_04570 IPR005704 Ribosomal protein S3, bacterial-type RYU24_04570 IPR009019 K homology domain superfamily, prokaryotic type RYU24_04570 IPR018280 Ribosomal protein S3, conserved site RYU24_04570 IPR036419 Ribosomal protein S3, C-terminal domain superfamily RYU24_04570 IPR001351 Ribosomal protein S3, C-terminal RYU24_04570 IPR004087 K Homology domain RYU24_04570 IPR015946 K homology domain-like, alpha/beta RYU24_04570 IPR004044 K Homology domain, type 2 RYU24_04580 IPR020798 Ribosomal protein L16, conserved site RYU24_04580 IPR000114 Ribosomal protein L16 RYU24_04580 IPR036920 Ribosomal protein L10e/L16 superfamily RYU24_04580 IPR016180 Ribosomal protein L10e/L16 RYU24_04590 IPR036049 Ribosomal protein L29/L35 superfamily RYU24_04590 IPR001854 Ribosomal protein L29/L35 RYU24_04600 IPR019979 Ribosomal protein S17, conserved site RYU24_04600 IPR019984 30S ribosomal protein S17 RYU24_04600 IPR012340 Nucleic acid-binding, OB-fold RYU24_04600 IPR000266 Ribosomal protein S17/S11 RYU24_04610 IPR036853 Ribosomal protein L14 superfamily RYU24_04610 IPR000218 Ribosomal protein L14P RYU24_04610 IPR005745 Ribosomal protein L14P, bacterial-type RYU24_04610 IPR019972 Ribosomal protein L14P, conserved site RYU24_04620 IPR005824 KOW RYU24_04620 IPR041988 Ribosomal Protein L26/L24, KOW domain RYU24_04620 IPR014722 Ribosomal protein L2, domain 2 RYU24_04620 IPR003256 Ribosomal protein L24 RYU24_04620 IPR005825 Ribosomal protein L24/L26, conserved site RYU24_04620 IPR008991 Translation protein SH3-like domain superfamily RYU24_04630 IPR031310 Ribosomal protein L5, N-terminal RYU24_04630 IPR022803 Ribosomal protein L5 domain superfamily RYU24_04630 IPR031309 Ribosomal protein L5, C-terminal RYU24_04630 IPR020930 Ribosomal protein L5, bacterial-type RYU24_04630 IPR020929 Ribosomal protein L5, conserved site RYU24_04630 IPR002132 Ribosomal protein L5 RYU24_04640 IPR001209 Ribosomal protein S14 RYU24_04640 IPR023036 Ribosomal protein S14, bacterial/plastid RYU24_04640 IPR018271 Ribosomal protein S14, conserved site RYU24_04650 IPR000630 Ribosomal protein S8 RYU24_04650 IPR035987 Ribosomal protein S8 superfamily RYU24_04660 IPR002358 Ribosomal protein L6, conserved site RYU24_04660 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily RYU24_04660 IPR020040 Ribosomal protein L6, alpha-beta domain RYU24_04660 IPR000702 Ribosomal protein L6 RYU24_04660 IPR019906 Ribosomal protein L6, bacterial-type RYU24_04670 IPR005484 Ribosomal protein L18 RYU24_04670 IPR004389 Ribosomal protein L18, bacterial-type RYU24_04680 IPR018192 Ribosomal protein S5, N-terminal, conserved site RYU24_04680 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_04680 IPR013810 Ribosomal protein S5, N-terminal RYU24_04680 IPR005324 Ribosomal protein S5, C-terminal RYU24_04680 IPR005712 Ribosomal protein S5, bacterial-type RYU24_04680 IPR000851 Ribosomal protein S5 RYU24_04680 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_04690 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily RYU24_04690 IPR005996 Ribosomal protein L30, bacterial-type RYU24_04690 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RYU24_04700 IPR021131 Ribosomal protein L18e/L15P RYU24_04700 IPR001196 Ribosomal protein L15, conserved site RYU24_04700 IPR030878 Ribosomal protein L15 RYU24_04700 IPR036227 Ribosomal L18e/L15P superfamily RYU24_04700 IPR005749 Ribosomal protein L15, bacterial-type RYU24_04710 IPR026593 Protein translocase subunit SecY RYU24_04710 IPR002208 SecY/SEC61-alpha family RYU24_04710 IPR030659 SecY conserved site RYU24_04710 IPR023201 SecY domain superfamily RYU24_04720 IPR018269 Ribosomal protein S13, conserved site RYU24_04720 IPR027437 30s ribosomal protein S13, C-terminal RYU24_04720 IPR010979 Ribosomal protein S13-like, H2TH RYU24_04720 IPR001892 Ribosomal protein S13 RYU24_04720 IPR019980 Ribosomal protein S13, bacterial-type RYU24_04730 IPR001971 Ribosomal protein S11 RYU24_04730 IPR019981 Ribosomal protein S11, bacterial-type RYU24_04730 IPR018102 Ribosomal S11, conserved site RYU24_04730 IPR036967 Ribosomal protein S11 superfamily RYU24_04740 IPR036986 RNA-binding S4 domain superfamily RYU24_04740 IPR002942 RNA-binding S4 domain RYU24_04740 IPR022801 Ribosomal protein S4/S9 RYU24_04740 IPR005709 Ribosomal protein S4, bacterial-type RYU24_04740 IPR018079 Ribosomal protein S4, conserved site RYU24_04740 IPR001912 Ribosomal protein S4/S9, N-terminal RYU24_04750 IPR036643 DNA-directed RNA polymerase, insert domain superfamily RYU24_04750 IPR011260 RNA polymerase, alpha subunit, C-terminal RYU24_04750 IPR036603 RNA polymerase, RBP11-like subunit RYU24_04750 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RYU24_04750 IPR011262 DNA-directed RNA polymerase, insert domain RYU24_04750 IPR011773 DNA-directed RNA polymerase, alpha subunit RYU24_04760 IPR000456 Ribosomal protein L17 RYU24_04760 IPR036373 Ribosomal protein L17 superfamily RYU24_04770 IPR020946 Flavin monooxygenase-like RYU24_04770 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_04780 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_04780 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_04780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_04780 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_04780 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_04780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_04780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_04790 IPR005631 Flavinator of succinate dehydrogenase RYU24_04790 IPR036714 Flavinator of succinate dehydrogenase superfamily RYU24_04840 IPR004779 Carboxylate/Amino Acid/Amine Transporter RYU24_04840 IPR000620 EamA domain RYU24_04860 IPR012658 Conserved hypothetical protein CHP02443 RYU24_04870 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RYU24_04870 IPR001567 Peptidase M3A/M3B catalytic domain RYU24_04890 IPR011129 Cold shock domain RYU24_04890 IPR040476 RNase II/RNase R, cold shock domain RYU24_04890 IPR012340 Nucleic acid-binding, OB-fold RYU24_04890 IPR013223 Ribonuclease B, N-terminal OB domain RYU24_04890 IPR001900 Ribonuclease II/R RYU24_04890 IPR022966 Ribonuclease II/R, conserved site RYU24_04890 IPR004476 Ribonuclease II/ribonuclease R RYU24_04890 IPR011805 Ribonuclease R RYU24_04890 IPR013668 Ribonuclease R winged-helix domain RYU24_04890 IPR022967 RNA-binding domain, S1 RYU24_04890 IPR003029 S1 domain RYU24_04930 IPR011234 Fumarylacetoacetase-like, C-terminal RYU24_04930 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RYU24_04950 IPR023679 Uncharacterised protein family UPF0761, bacterial RYU24_04950 IPR017039 Virulence factor BrkB RYU24_04960 IPR005025 NADPH-dependent FMN reductase-like RYU24_04960 IPR010089 Flavoprotein WrbA-like RYU24_04960 IPR029039 Flavoprotein-like superfamily RYU24_04960 IPR001226 Flavodoxin, conserved site RYU24_04960 IPR008254 Flavodoxin/nitric oxide synthase RYU24_04980 IPR010079 Xanthine phosphoribosyltransferase RYU24_04980 IPR029057 Phosphoribosyltransferase-like RYU24_04980 IPR000836 Phosphoribosyltransferase domain RYU24_05040 IPR020549 Endoribonuclease YbeY, conserved site RYU24_05040 IPR023091 Metalloprotease catalytic domain superfamily, predicted RYU24_05040 IPR002036 Endoribonuclease YbeY RYU24_05050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_05050 IPR003714 PhoH-like protein RYU24_05060 IPR005839 Methylthiotransferase RYU24_05060 IPR002792 TRAM domain RYU24_05060 IPR023404 Radical SAM, alpha/beta horseshoe RYU24_05060 IPR007197 Radical SAM RYU24_05060 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB RYU24_05060 IPR038135 Methylthiotransferase, N-terminal domain superfamily RYU24_05060 IPR013848 Methylthiotransferase, N-terminal RYU24_05060 IPR020612 Methylthiotransferase, conserved site RYU24_05060 IPR006638 Elp3/MiaB/NifB RYU24_05070 IPR000189 Prokaryotic transglycosylase, active site RYU24_05070 IPR008258 Transglycosylase SLT domain 1 RYU24_05070 IPR016047 Peptidase M23 RYU24_05070 IPR011055 Duplicated hybrid motif RYU24_05070 IPR010090 Phage tail tape measure protein RYU24_05070 IPR023346 Lysozyme-like domain superfamily RYU24_05090 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RYU24_05090 IPR010945 Malate dehydrogenase, type 2 RYU24_05090 IPR036291 NAD(P)-binding domain superfamily RYU24_05090 IPR001236 Lactate/malate dehydrogenase, N-terminal RYU24_05090 IPR022383 Lactate/malate dehydrogenase, C-terminal RYU24_05090 IPR001557 L-lactate/malate dehydrogenase RYU24_05150 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_05150 IPR007473 Ribosomal RNA large subunit methyltransferase J RYU24_05150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_05160 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase RYU24_05160 IPR000462 CDP-alcohol phosphatidyltransferase RYU24_05180 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RYU24_05180 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_05180 IPR023753 FAD/NAD(P)-binding domain RYU24_05180 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RYU24_05180 IPR006258 Dihydrolipoamide dehydrogenase RYU24_05180 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RYU24_05180 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RYU24_05200 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_05200 IPR001279 Metallo-beta-lactamase RYU24_05200 IPR029021 Protein-tyrosine phosphatase-like RYU24_05200 IPR005939 Beta-lactamase hydrolase-like RYU24_05220 IPR005746 Thioredoxin RYU24_05220 IPR036249 Thioredoxin-like superfamily RYU24_05220 IPR017937 Thioredoxin, conserved site RYU24_05220 IPR013766 Thioredoxin domain RYU24_05230 IPR006683 Thioesterase domain RYU24_05230 IPR029069 HotDog domain superfamily RYU24_05230 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase RYU24_05230 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain RYU24_05250 IPR035571 UPF0234-like, C-terminal RYU24_05250 IPR007551 Protein of unknown function DUF520 RYU24_05250 IPR035570 UPF0234, N-terminal RYU24_05250 IPR036183 YajQ-like superfamily RYU24_05270 IPR006076 FAD dependent oxidoreductase RYU24_05270 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_05270 IPR008471 MnmC-like methyltransferase RYU24_05270 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal RYU24_05270 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC RYU24_05290 IPR005545 YCII-related RYU24_05290 IPR011008 Dimeric alpha-beta barrel RYU24_05300 IPR006008 Intracellular septation protein A RYU24_05310 IPR016195 Polymerase/histidinol phosphatase-like RYU24_05310 IPR003141 Polymerase/histidinol phosphatase, N-terminal RYU24_05310 IPR004013 PHP domain RYU24_05320 IPR021134 Bestrophin/UPF0187 RYU24_05330 IPR001405 Uncharacterised protein family UPF0758 RYU24_05330 IPR010994 RuvA domain 2-like RYU24_05330 IPR025657 RadC-like JAB domain RYU24_05330 IPR037518 MPN domain RYU24_05340 IPR003382 Flavoprotein RYU24_05340 IPR036551 Flavin prenyltransferase-like RYU24_05340 IPR035929 CoaB-like superfamily RYU24_05340 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RYU24_05340 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RYU24_05360 IPR013785 Aldolase-type TIM barrel RYU24_05360 IPR035587 DUS-like, FMN-binding domain RYU24_05360 IPR001269 tRNA-dihydrouridine synthase RYU24_05360 IPR018517 tRNA-dihydrouridine synthase, conserved site RYU24_05360 IPR004653 tRNA-dihydrouridine(20/20a) synthase RYU24_05370 IPR035069 TTHA1013/TTHA0281-like RYU24_05370 IPR011010 DNA breaking-rejoining enzyme, catalytic core RYU24_05370 IPR013762 Integrase-like, catalytic domain superfamily RYU24_05370 IPR002104 Integrase, catalytic domain RYU24_05370 IPR010998 Integrase/recombinase, N-terminal RYU24_05500 IPR036390 Winged helix DNA-binding domain superfamily RYU24_05500 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_05500 IPR015927 Peptidase S24/S26A/S26B/S26C RYU24_05500 IPR006199 LexA repressor, DNA-binding domain RYU24_05500 IPR006197 Peptidase S24, LexA-like RYU24_05500 IPR039418 LexA-like RYU24_05500 IPR006200 Transcription regulator LexA RYU24_05500 IPR036286 LexA/Signal peptidase-like superfamily RYU24_05590 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_05590 IPR005021 Terminase large subunit, Lambdalikevirus-type RYU24_05590 IPR036390 Winged helix DNA-binding domain superfamily RYU24_05830 IPR036259 MFS transporter superfamily RYU24_05830 IPR020846 Major facilitator superfamily domain RYU24_05830 IPR011701 Major facilitator superfamily RYU24_05840 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RYU24_05840 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RYU24_05840 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RYU24_05840 IPR036291 NAD(P)-binding domain superfamily RYU24_05840 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RYU24_05850 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal RYU24_05860 IPR012136 NADP transhydrogenase, beta subunit RYU24_05860 IPR029035 DHS-like NAD/FAD-binding domain superfamily RYU24_05860 IPR034300 NADP transhydrogenase beta-like domain RYU24_05880 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RYU24_05890 IPR026040 Hydroxypyruvate isomerase-like RYU24_05890 IPR036237 Xylose isomerase-like superfamily RYU24_05890 IPR013022 Xylose isomerase-like, TIM barrel domain RYU24_05900 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_05900 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RYU24_05900 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RYU24_05900 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RYU24_05900 IPR036291 NAD(P)-binding domain superfamily RYU24_05900 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RYU24_05900 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RYU24_05910 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_05910 IPR029045 ClpP/crotonase-like domain superfamily RYU24_05910 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RYU24_05920 IPR001789 Signal transduction response regulator, receiver domain RYU24_05920 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RYU24_05920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_05920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_05920 IPR005467 Histidine kinase domain RYU24_05920 IPR003660 HAMP domain RYU24_05920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_05920 IPR019247 Histidine kinase BarA, N-terminal RYU24_05920 IPR036641 HPT domain superfamily RYU24_05920 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_05920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_05920 IPR011006 CheY-like superfamily RYU24_05930 IPR001926 Pyridoxal-phosphate dependent enzyme RYU24_05930 IPR005856 Cysteine synthase RYU24_05930 IPR005858 Cysteine synthase CysM RYU24_05930 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RYU24_05930 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RYU24_05950 IPR030390 RNA methyltransferase TrmA, active site RYU24_05950 IPR012340 Nucleic acid-binding, OB-fold RYU24_05950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_05950 IPR002792 TRAM domain RYU24_05950 IPR010280 (Uracil-5)-methyltransferase family RYU24_05950 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RYU24_05960 IPR002912 ACT domain RYU24_05960 IPR012675 Beta-grasp domain superfamily RYU24_05960 IPR003607 HD/PDEase domain RYU24_05960 IPR004811 RelA/SpoT family RYU24_05960 IPR007685 RelA/SpoT RYU24_05960 IPR004095 TGS RYU24_05960 IPR012676 TGS-like RYU24_05960 IPR033655 RelA, TGS domain RYU24_05980 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RYU24_05980 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RYU24_05980 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RYU24_05980 IPR005665 Protein-export membrane protein SecF, bacterial RYU24_05990 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RYU24_05990 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RYU24_05990 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RYU24_05990 IPR027398 SecD export protein N-terminal TM domain RYU24_05990 IPR005791 Protein translocase subunit SecD RYU24_06000 IPR003849 Preprotein translocase YajC RYU24_06010 IPR002616 tRNA-guanine(15) transglycosylase-like RYU24_06010 IPR036511 Queuine tRNA-ribosyltransferase-like RYU24_06010 IPR004803 tRNA-guanine transglycosylase RYU24_06040 IPR007156 LemA RYU24_06040 IPR023353 LemA-like domain superfamily RYU24_06060 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily RYU24_06060 IPR042119 QueA, domain 2 RYU24_06060 IPR042118 QueA, domain 1 RYU24_06060 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RYU24_06070 IPR000873 AMP-dependent synthetase/ligase RYU24_06070 IPR020845 AMP-binding, conserved site RYU24_06070 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_06070 IPR042099 AMP-dependent synthetase-like superfamily RYU24_06090 IPR016169 FAD-binding, type PCMH, subdomain 2 RYU24_06090 IPR007173 D-arabinono-1,4-lactone oxidase RYU24_06090 IPR016166 FAD-binding domain, PCMH-type RYU24_06090 IPR036318 FAD-binding, type PCMH-like superfamily RYU24_06090 IPR016167 FAD-binding, type PCMH, subdomain 1 RYU24_06090 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase RYU24_06090 IPR006094 FAD linked oxidase, N-terminal RYU24_06090 IPR006093 Oxygen oxidoreductase covalent FAD-binding site RYU24_06090 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RYU24_06110 IPR004095 TGS RYU24_06110 IPR012675 Beta-grasp domain superfamily RYU24_06110 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_06110 IPR004154 Anticodon-binding RYU24_06110 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RYU24_06110 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RYU24_06110 IPR012676 TGS-like RYU24_06110 IPR002320 Threonine-tRNA ligase, class IIa RYU24_06110 IPR033728 Threonine-tRNA ligase catalytic core domain RYU24_06110 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RYU24_06110 IPR036621 Anticodon-binding domain superfamily RYU24_06120 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily RYU24_06120 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily RYU24_06120 IPR019815 Translation initiation factor 3, C-terminal RYU24_06120 IPR019814 Translation initiation factor 3, N-terminal RYU24_06120 IPR001288 Translation initiation factor 3 RYU24_06140 IPR001584 Integrase, catalytic core RYU24_06140 IPR036397 Ribonuclease H superfamily RYU24_06140 IPR012337 Ribonuclease H-like superfamily RYU24_06140 IPR025948 HTH-like domain RYU24_06160 IPR002068 Alpha crystallin/Hsp20 domain RYU24_06160 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain RYU24_06160 IPR008978 HSP20-like chaperone RYU24_06170 IPR010987 Glutathione S-transferase, C-terminal-like RYU24_06170 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RYU24_06170 IPR004045 Glutathione S-transferase, N-terminal RYU24_06170 IPR004046 Glutathione S-transferase, C-terminal RYU24_06170 IPR036249 Thioredoxin-like superfamily RYU24_06190 IPR032816 SNARE associated Golgi protein RYU24_06210 IPR037229 Ribosomal protein L35 superfamily RYU24_06210 IPR018265 Ribosomal protein L35, conserved site RYU24_06210 IPR021137 Ribosomal protein L35 RYU24_06210 IPR001706 Ribosomal protein L35, non-mitochondrial RYU24_06220 IPR005813 Ribosomal protein L20 RYU24_06220 IPR035566 Ribosomal protein L20, C-terminal RYU24_06240 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RYU24_06240 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RYU24_06240 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RYU24_06240 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_06240 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RYU24_06240 IPR002319 Phenylalanyl-tRNA synthetase RYU24_06250 IPR005121 Ferrodoxin-fold anticodon-binding domain RYU24_06250 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily RYU24_06250 IPR012340 Nucleic acid-binding, OB-fold RYU24_06250 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RYU24_06250 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RYU24_06250 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain RYU24_06250 IPR002547 tRNA-binding domain RYU24_06250 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain RYU24_06250 IPR005147 tRNA synthetase, B5-domain RYU24_06250 IPR009061 Putative DNA-binding domain superfamily RYU24_06250 IPR005146 B3/B4 tRNA-binding domain RYU24_06260 IPR005684 Integration host factor, alpha subunit RYU24_06260 IPR020816 Histone-like DNA-binding protein, conserved site RYU24_06260 IPR000119 Histone-like DNA-binding protein RYU24_06260 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RYU24_06280 IPR036269 Rho termination factor, N-terminal domain superfamily RYU24_06280 IPR004665 Transcription termination factor Rho RYU24_06280 IPR011113 Rho termination factor, RNA-binding domain RYU24_06280 IPR011112 Rho termination factor, N-terminal RYU24_06280 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RYU24_06280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_06280 IPR012340 Nucleic acid-binding, OB-fold RYU24_06280 IPR011129 Cold shock domain RYU24_06280 IPR003593 AAA+ ATPase domain RYU24_06280 IPR041703 Transcription termination factor Rho, ATP binding domain RYU24_06290 IPR005746 Thioredoxin RYU24_06290 IPR036249 Thioredoxin-like superfamily RYU24_06290 IPR017937 Thioredoxin, conserved site RYU24_06290 IPR013766 Thioredoxin domain RYU24_06300 IPR022371 Exopolyphosphatase RYU24_06300 IPR003695 Ppx/GppA phosphatase RYU24_06300 IPR030673 Pyrophosphatase, GppA/Ppx-type RYU24_06310 IPR029045 ClpP/crotonase-like domain superfamily RYU24_06310 IPR001095 Acetyl-CoA carboxylase, alpha subunit RYU24_06310 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RYU24_06320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_06320 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain RYU24_06320 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal RYU24_06320 IPR012094 tRNA(Ile)-lysidine synthase RYU24_06320 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal RYU24_06320 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RYU24_06330 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_06330 IPR036291 NAD(P)-binding domain superfamily RYU24_06330 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RYU24_06330 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RYU24_06330 IPR000304 Pyrroline-5-carboxylate reductase RYU24_06340 IPR003425 CCB3/YggT RYU24_06350 IPR036397 Ribonuclease H superfamily RYU24_06350 IPR012337 Ribonuclease H-like superfamily RYU24_06350 IPR008918 Helix-hairpin-helix motif, class 2 RYU24_06350 IPR018320 DNA polymerase 1 RYU24_06350 IPR029060 PIN-like domain superfamily RYU24_06350 IPR001098 DNA-directed DNA polymerase, family A, palm domain RYU24_06350 IPR020045 DNA polymerase I-like, H3TH domain RYU24_06350 IPR002562 3'-5' exonuclease domain RYU24_06350 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RYU24_06350 IPR002298 DNA polymerase A RYU24_06350 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RYU24_06350 IPR002421 5'-3' exonuclease, N-terminal RYU24_06350 IPR019760 DNA-directed DNA polymerase, family A, conserved site RYU24_06390 IPR013369 Type II secretion system GspE RYU24_06390 IPR042181 Type II secretion system, protein E, N-terminal RYU24_06390 IPR001482 Type II/IV secretion system protein RYU24_06390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_06390 IPR037257 General secretory system II, protein E, N-terminal superfamily RYU24_06400 IPR015946 K homology domain-like, alpha/beta RYU24_06400 IPR019953 Organic hydroperoxide resistance protein famiy RYU24_06400 IPR036102 OsmC/Ohr superfamily RYU24_06400 IPR003718 OsmC/Ohr family RYU24_06410 IPR003010 Carbon-nitrogen hydrolase RYU24_06410 IPR036526 Carbon-nitrogen hydrolase superfamily RYU24_06410 IPR001110 Uncharacterised protein family UPF0012, conserved site RYU24_06500 IPR007481 Stringent starvation protein B RYU24_06500 IPR036760 SspB-like superfamily RYU24_06510 IPR040079 Glutathione Transferase family RYU24_06510 IPR010987 Glutathione S-transferase, C-terminal-like RYU24_06510 IPR036249 Thioredoxin-like superfamily RYU24_06510 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RYU24_06510 IPR004046 Glutathione S-transferase, C-terminal RYU24_06510 IPR034341 Stringent starvation protein A, N-terminal RYU24_06510 IPR004045 Glutathione S-transferase, N-terminal RYU24_06530 IPR000754 Ribosomal protein S9 RYU24_06530 IPR020574 Ribosomal protein S9, conserved site RYU24_06530 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_06530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_06530 IPR023035 Ribosomal protein S9, bacterial/plastid RYU24_06540 IPR005822 Ribosomal protein L13 RYU24_06540 IPR005823 Ribosomal protein L13, bacterial-type RYU24_06540 IPR036899 Ribosomal protein L13 superfamily RYU24_06560 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase RYU24_06560 IPR005255 PdxA family RYU24_06570 IPR011530 Ribosomal RNA adenine dimethylase RYU24_06570 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RYU24_06570 IPR023165 rRNA adenine dimethylase-like RYU24_06570 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RYU24_06570 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RYU24_06570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_06580 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RYU24_06580 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_06580 IPR029052 Metallo-dependent phosphatase-like RYU24_06660 IPR042108 GTPase HflX, N-terminal domain superfamily RYU24_06660 IPR025121 GTPase HflX, N-terminal RYU24_06660 IPR016496 GTPase HflX RYU24_06660 IPR006073 GTP binding domain RYU24_06660 IPR035647 EF-G domain III/V-like RYU24_06660 IPR030394 HflX-type guanine nucleotide-binding (G) domain RYU24_06660 IPR032305 GTP-binding protein, middle domain RYU24_06660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_06690 IPR030871 Cardiolipin synthase C RYU24_06690 IPR025202 Phospholipase D-like domain RYU24_06690 IPR001736 Phospholipase D/Transphosphatidylase RYU24_06700 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RYU24_06700 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_06700 IPR029052 Metallo-dependent phosphatase-like RYU24_06700 IPR006311 Twin-arginine translocation pathway, signal sequence RYU24_06720 IPR004736 MFS transporter, metabolite:H symporter RYU24_06720 IPR011701 Major facilitator superfamily RYU24_06720 IPR020846 Major facilitator superfamily domain RYU24_06720 IPR005828 Major facilitator, sugar transporter-like RYU24_06720 IPR036259 MFS transporter superfamily RYU24_06720 IPR005829 Sugar transporter, conserved site RYU24_06740 IPR004254 AdipoR/Haemolysin-III-related RYU24_06740 IPR005744 Hly-III RYU24_06780 IPR029045 ClpP/crotonase-like domain superfamily RYU24_06780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_06780 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RYU24_06780 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RYU24_06780 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RYU24_06780 IPR036291 NAD(P)-binding domain superfamily RYU24_06780 IPR012802 Fatty oxidation complex, alpha subunit FadJ RYU24_06780 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_06790 IPR020616 Thiolase, N-terminal RYU24_06790 IPR002155 Thiolase RYU24_06790 IPR016039 Thiolase-like RYU24_06790 IPR020615 Thiolase, acyl-enzyme intermediate active site RYU24_06790 IPR020610 Thiolase, active site RYU24_06790 IPR020617 Thiolase, C-terminal RYU24_06790 IPR020613 Thiolase, conserved site RYU24_06800 IPR003313 AraC-type arabinose-binding/dimerisation domain RYU24_06800 IPR020449 Transcription regulator HTH, AraC- type RYU24_06800 IPR018062 HTH domain AraC-type, conserved site RYU24_06800 IPR018060 DNA binding HTH domain, AraC-type RYU24_06800 IPR037923 Transcription regulator HTH-like RYU24_06800 IPR009057 Homeobox-like domain superfamily RYU24_06810 IPR003673 CoA-transferase family III RYU24_06810 IPR023606 CoA-transferase family III domain superfamily RYU24_06820 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RYU24_06820 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RYU24_06820 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RYU24_06820 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RYU24_06850 IPR020615 Thiolase, acyl-enzyme intermediate active site RYU24_06850 IPR020610 Thiolase, active site RYU24_06850 IPR020617 Thiolase, C-terminal RYU24_06850 IPR020613 Thiolase, conserved site RYU24_06850 IPR020616 Thiolase, N-terminal RYU24_06850 IPR016039 Thiolase-like RYU24_06850 IPR002155 Thiolase RYU24_06860 IPR012902 Prokaryotic N-terminal methylation site RYU24_06860 IPR001082 Fimbrial protein pilin RYU24_06870 IPR036737 OmpA-like domain superfamily RYU24_06870 IPR006665 OmpA-like domain RYU24_06870 IPR006664 Outer membrane protein, bacterial RYU24_06870 IPR027385 Outer membrane protein beta-barrel domain RYU24_06870 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel RYU24_06890 IPR004841 Amino acid permease/ SLC12A domain RYU24_06890 IPR004840 Amino acid permease, conserved site RYU24_06900 IPR007848 Methyltransferase small domain RYU24_06900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_06900 IPR013675 Methyltransferase small, N-terminal RYU24_06900 IPR023543 rRNA small subunit methyltransferase C RYU24_06900 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_06910 IPR006042 Xanthine/uracil permease RYU24_06910 IPR006043 Xanthine/uracil/vitamin C permease RYU24_06920 IPR042116 GTP-binding protein TypA/BipA, C-terminal RYU24_06920 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_06920 IPR000795 Transcription factor, GTP-binding domain RYU24_06920 IPR005225 Small GTP-binding protein domain RYU24_06920 IPR006298 GTP-binding protein TypA RYU24_06920 IPR031157 Tr-type G domain, conserved site RYU24_06920 IPR004161 Translation elongation factor EFTu-like, domain 2 RYU24_06920 IPR000640 Elongation factor EFG, domain V-like RYU24_06920 IPR035647 EF-G domain III/V-like RYU24_06920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_06920 IPR035651 BipA, domain V RYU24_06930 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L RYU24_06930 IPR019823 Large-conductance mechanosensitive channel, conserved site RYU24_06930 IPR036019 Gated mechanosensitive channel RYU24_06930 IPR001185 Large-conductance mechanosensitive channel RYU24_06940 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RYU24_06940 IPR023034 Peptidyl-prolyl isomerase SurA RYU24_06940 IPR015391 SurA N-terminal RYU24_06940 IPR027304 Trigger factor/SurA domain superfamily RYU24_06950 IPR010663 Zinc finger, FPG/IleRS-type RYU24_06950 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RYU24_06950 IPR010979 Ribosomal protein S13-like, H2TH RYU24_06950 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain RYU24_06950 IPR020629 Formamidopyrimidine-DNA glycosylase RYU24_06950 IPR035937 MutM-like, N-terminal RYU24_06950 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RYU24_06960 IPR007049 Carbohydrate-selective porin OprB RYU24_06960 IPR038673 Carbohydrate-selective porin OprB superfamily RYU24_06970 IPR013785 Aldolase-type TIM barrel RYU24_06970 IPR023663 NADPH dehydrogenase RYU24_06970 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RYU24_07000 IPR006222 Aminomethyltransferase, folate-binding domain RYU24_07000 IPR028896 Aminomethyltransferase-like RYU24_07000 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RYU24_07000 IPR017703 YgfZ/GcvT conserved site RYU24_07010 IPR008972 Cupredoxin RYU24_07010 IPR002355 Multicopper oxidase, copper-binding site RYU24_07010 IPR033138 Multicopper oxidases, conserved site RYU24_07010 IPR011707 Multicopper oxidase, type 3 RYU24_07010 IPR011706 Multicopper oxidase, type 2 RYU24_07020 IPR006249 Aconitase/Iron-responsive element-binding protein 2 RYU24_07020 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RYU24_07020 IPR036008 Aconitase, iron-sulfur domain RYU24_07020 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RYU24_07020 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RYU24_07020 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent RYU24_07020 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RYU24_07100 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_07100 IPR006225 Pseudouridine synthase, RluC/RluD RYU24_07100 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RYU24_07100 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_07120 IPR027806 Harbinger transposase-derived nuclease domain RYU24_07120 IPR027805 Transposase, Helix-turn-helix domain RYU24_07160 IPR004624 PhnA protein RYU24_07160 IPR013988 PhnA protein, C-terminal RYU24_07160 IPR013987 PhnA protein, N-terminal RYU24_07200 IPR022998 Thiamine phosphate synthase/TenI RYU24_07200 IPR036206 Thiamin phosphate synthase superfamily RYU24_07200 IPR034291 Thiamine phosphate synthase RYU24_07200 IPR029056 Ribokinase-like RYU24_07200 IPR004305 Thiaminase-2/PQQC RYU24_07200 IPR013785 Aldolase-type TIM barrel RYU24_07200 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RYU24_07200 IPR016084 Haem oxygenase-like, multi-helical RYU24_07200 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RYU24_07210 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_07210 IPR023214 HAD superfamily RYU24_07210 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RYU24_07210 IPR036412 HAD-like superfamily RYU24_07260 IPR008523 Protein of unknown function DUF805 RYU24_07280 IPR009078 Ferritin-like superfamily RYU24_07280 IPR012348 Ribonucleotide reductase-like RYU24_07280 IPR033909 Ribonucleotide reductase small subunit RYU24_07280 IPR000358 Ribonucleotide reductase small subunit family RYU24_07310 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RYU24_07310 IPR005144 ATP-cone domain RYU24_07310 IPR013346 Ribonucleotide reductase, class I , alpha subunit RYU24_07310 IPR000788 Ribonucleotide reductase large subunit, C-terminal RYU24_07310 IPR013509 Ribonucleotide reductase large subunit, N-terminal RYU24_07310 IPR039718 Ribonucleoside-diphosphate reductase large subunit RYU24_07320 IPR001867 OmpR/PhoB-type DNA-binding domain RYU24_07320 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_07320 IPR001789 Signal transduction response regulator, receiver domain RYU24_07320 IPR039420 Transcriptional regulatory protein WalR-like RYU24_07320 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_07320 IPR011006 CheY-like superfamily RYU24_07330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_07330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_07330 IPR003660 HAMP domain RYU24_07330 IPR005467 Histidine kinase domain RYU24_07330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_07330 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_07330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_07350 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RYU24_07350 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RYU24_07350 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily RYU24_07360 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RYU24_07360 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RYU24_07370 IPR010218 NADH dehydrogenase, subunit C RYU24_07370 IPR023062 NADH dehydrogenase, subunit CD RYU24_07370 IPR001135 NADH-quinone oxidoreductase, subunit D RYU24_07370 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily RYU24_07370 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily RYU24_07370 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RYU24_07370 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RYU24_07370 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site RYU24_07370 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RYU24_07370 IPR029014 [NiFe]-hydrogenase, large subunit RYU24_07380 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal RYU24_07380 IPR036249 Thioredoxin-like superfamily RYU24_07380 IPR042128 NuoE domain RYU24_07380 IPR002023 NADH-quinone oxidoreductase subunit E-like RYU24_07390 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RYU24_07390 IPR011537 NADH ubiquinone oxidoreductase, F subunit RYU24_07390 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain RYU24_07390 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily RYU24_07390 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain RYU24_07390 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily RYU24_07390 IPR019554 Soluble ligand binding domain RYU24_07400 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RYU24_07400 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RYU24_07400 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RYU24_07400 IPR036010 2Fe-2S ferredoxin-like superfamily RYU24_07400 IPR009010 Aspartate decarboxylase-like domain superfamily RYU24_07400 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RYU24_07400 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RYU24_07400 IPR006656 Molybdopterin oxidoreductase RYU24_07410 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RYU24_07410 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RYU24_07420 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_07420 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RYU24_07420 IPR010226 NADH-quinone oxidoreductase, chain I RYU24_07430 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RYU24_07430 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ RYU24_07440 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RYU24_07440 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RYU24_07450 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RYU24_07450 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RYU24_07450 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RYU24_07450 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RYU24_07460 IPR010227 NADH-quinone oxidoreductase, chain M/4 RYU24_07460 IPR003918 NADH:ubiquinone oxidoreductase RYU24_07460 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RYU24_07470 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RYU24_07470 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RYU24_07480 IPR005765 Uracil phosphoribosyl transferase RYU24_07480 IPR034332 Uracil phosphoribosyltransferase, bacterial-type RYU24_07480 IPR000836 Phosphoribosyltransferase domain RYU24_07480 IPR029057 Phosphoribosyltransferase-like RYU24_07490 IPR012156 Cold shock, CspA RYU24_07490 IPR011129 Cold shock domain RYU24_07490 IPR019844 Cold-shock (CSD) domain RYU24_07490 IPR002059 Cold-shock protein, DNA-binding RYU24_07490 IPR012340 Nucleic acid-binding, OB-fold RYU24_07510 IPR019844 Cold-shock (CSD) domain RYU24_07510 IPR012156 Cold shock, CspA RYU24_07510 IPR011129 Cold shock domain RYU24_07510 IPR002059 Cold-shock protein, DNA-binding RYU24_07510 IPR012340 Nucleic acid-binding, OB-fold RYU24_07520 IPR005119 LysR, substrate-binding RYU24_07520 IPR000847 Transcription regulator HTH, LysR RYU24_07520 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_07520 IPR036390 Winged helix DNA-binding domain superfamily RYU24_07530 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_07530 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_07530 IPR033892 Ferredoxin--NADP reductase, bacteria RYU24_07530 IPR017938 Riboflavin synthase-like beta-barrel RYU24_07530 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RYU24_07530 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RYU24_07530 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_07560 IPR008910 Conserved TM helix RYU24_07590 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like RYU24_07590 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_07590 IPR023166 HI0933-like insert domain superfamily RYU24_07640 IPR029020 Ammonium/urea transporter RYU24_07640 IPR001905 Ammonium transporter RYU24_07640 IPR018047 Ammonium transporter, conserved site RYU24_07640 IPR024041 Ammonium transporter AmtB-like domain RYU24_07650 IPR001279 Metallo-beta-lactamase RYU24_07650 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_07680 IPR029038 Methionyl-tRNA synthetase, Zn-domain RYU24_07680 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RYU24_07680 IPR002547 tRNA-binding domain RYU24_07680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_07680 IPR012340 Nucleic acid-binding, OB-fold RYU24_07680 IPR033911 Methioninyl-tRNA synthetase core domain RYU24_07680 IPR015413 Methionyl/Leucyl tRNA synthetase RYU24_07680 IPR014758 Methionyl-tRNA synthetase RYU24_07680 IPR023458 Methionine-tRNA ligase, type 1 RYU24_07680 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal RYU24_07680 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain RYU24_07680 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_07700 IPR034904 Fe-S cluster assembly domain superfamily RYU24_07700 IPR019591 Mrp/NBP35 ATP-binding protein RYU24_07700 IPR000808 Mrp, conserved site RYU24_07700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_07700 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RYU24_07730 IPR011852 TRAP transporter solute receptor, TAXI family RYU24_07750 IPR011962 dCTP deaminase RYU24_07750 IPR029054 dUTPase-like RYU24_07750 IPR036157 dUTPase-like superfamily RYU24_07750 IPR033704 dUTPase, trimeric RYU24_07800 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RYU24_07800 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RYU24_07800 IPR033730 Prokaryote proline-tRNA ligase core domain RYU24_07800 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RYU24_07800 IPR002316 Proline-tRNA ligase, class IIa RYU24_07800 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RYU24_07800 IPR036621 Anticodon-binding domain superfamily RYU24_07800 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RYU24_07800 IPR004154 Anticodon-binding RYU24_07800 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_07810 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RYU24_07810 IPR001036 Acriflavin resistance protein RYU24_07840 IPR011006 CheY-like superfamily RYU24_07840 IPR001789 Signal transduction response regulator, receiver domain RYU24_07850 IPR011006 CheY-like superfamily RYU24_07850 IPR001789 Signal transduction response regulator, receiver domain RYU24_07860 IPR039315 Chemotaxis protein CheW RYU24_07860 IPR002545 CheW-like domain RYU24_07860 IPR036061 CheW-like domain superfamily RYU24_07870 IPR004090 Chemotaxis methyl-accepting receptor RYU24_07870 IPR003660 HAMP domain RYU24_07870 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RYU24_07870 IPR029095 NarX-like, N-terminal RYU24_07880 IPR036641 HPT domain superfamily RYU24_07880 IPR001789 Signal transduction response regulator, receiver domain RYU24_07880 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RYU24_07880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_07880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_07880 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_07880 IPR011006 CheY-like superfamily RYU24_07880 IPR002545 CheW-like domain RYU24_07880 IPR036061 CheW-like domain superfamily RYU24_07880 IPR005467 Histidine kinase domain RYU24_07900 IPR036264 Bacterial exopeptidase dimerisation domain RYU24_07900 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RYU24_07900 IPR002933 Peptidase M20 RYU24_07900 IPR011650 Peptidase M20, dimerisation domain RYU24_07930 IPR007401 Protein of unknown function DUF454 RYU24_07970 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_07970 IPR029039 Flavoprotein-like superfamily RYU24_07970 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RYU24_07970 IPR008254 Flavodoxin/nitric oxide synthase RYU24_07970 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain RYU24_07970 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_07970 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria RYU24_07970 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding RYU24_07970 IPR001094 Flavodoxin-like RYU24_07970 IPR017938 Riboflavin synthase-like beta-barrel RYU24_07970 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_07970 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily RYU24_07990 IPR032692 Integral membrane protein YccS, N-terminal RYU24_07990 IPR010019 Integral membrane protein, YccS RYU24_07990 IPR010020 Integral membrane protein, YccS/YhfK RYU24_08000 IPR004734 Multidrug resistance protein RYU24_08000 IPR036259 MFS transporter superfamily RYU24_08000 IPR011701 Major facilitator superfamily RYU24_08000 IPR020846 Major facilitator superfamily domain RYU24_08000 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RYU24_08010 IPR000415 Nitroreductase-like RYU24_08010 IPR029479 Nitroreductase RYU24_08020 IPR004445 Sodium/glutamate symport carrier protein GltS RYU24_08030 IPR001463 Sodium:alanine symporter RYU24_08040 IPR003370 Chromate transporter RYU24_08050 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RYU24_08050 IPR001423 Lysophospholipase patatin, conserved site RYU24_08050 IPR002641 Patatin-like phospholipase domain RYU24_08070 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase RYU24_08070 IPR029069 HotDog domain superfamily RYU24_08070 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain RYU24_08070 IPR006683 Thioesterase domain RYU24_08080 IPR011075 Tetracyclin repressor-like, C-terminal domain RYU24_08080 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RYU24_08080 IPR001647 DNA-binding HTH domain, TetR-type RYU24_08080 IPR009057 Homeobox-like domain superfamily RYU24_08080 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RYU24_08090 IPR020846 Major facilitator superfamily domain RYU24_08090 IPR036259 MFS transporter superfamily RYU24_08090 IPR011701 Major facilitator superfamily RYU24_08100 IPR036249 Thioredoxin-like superfamily RYU24_08100 IPR004045 Glutathione S-transferase, N-terminal RYU24_08100 IPR010987 Glutathione S-transferase, C-terminal-like RYU24_08100 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RYU24_08100 IPR040079 Glutathione Transferase family RYU24_08110 IPR002938 FAD-binding domain RYU24_08110 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_08110 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase RYU24_08120 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_08120 IPR002938 FAD-binding domain RYU24_08120 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase RYU24_08140 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RYU24_08140 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RYU24_08140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_08150 IPR009822 YaeQ RYU24_08150 IPR038590 YaeQ superfamily RYU24_08150 IPR011335 Restriction endonuclease type II-like RYU24_08160 IPR003416 MgtC/SapB/SrpB/YhiD family RYU24_08170 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RYU24_08180 IPR029787 Nucleotide cyclase RYU24_08180 IPR000160 GGDEF domain RYU24_08180 IPR029016 GAF-like domain superfamily RYU24_08240 IPR005829 Sugar transporter, conserved site RYU24_08240 IPR020846 Major facilitator superfamily domain RYU24_08240 IPR005828 Major facilitator, sugar transporter-like RYU24_08240 IPR036259 MFS transporter superfamily RYU24_08260 IPR023635 Peptide deformylase RYU24_08260 IPR036821 Peptide deformylase superfamily RYU24_08270 IPR002765 Uncharacterised protein family UPF0145 RYU24_08270 IPR035439 UPF0145 domain superfamily RYU24_08280 IPR002765 Uncharacterised protein family UPF0145 RYU24_08280 IPR035439 UPF0145 domain superfamily RYU24_08290 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RYU24_08290 IPR003423 Outer membrane efflux protein RYU24_08300 IPR001036 Acriflavin resistance protein RYU24_08300 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RYU24_08300 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RYU24_08310 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RYU24_08310 IPR006143 RND efflux pump, membrane fusion protein RYU24_08320 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RYU24_08320 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RYU24_08340 IPR033749 Polyprenyl synthetase, conserved site RYU24_08340 IPR000092 Polyprenyl synthetase RYU24_08340 IPR008949 Isoprenoid synthase domain superfamily RYU24_08350 IPR001787 Ribosomal protein L21 RYU24_08350 IPR028909 Ribosomal protein L21-like RYU24_08350 IPR018258 Ribosomal protein L21, conserved site RYU24_08350 IPR036164 L21-like superfamily RYU24_08360 IPR018261 Ribosomal protein L27, conserved site RYU24_08360 IPR001684 Ribosomal protein L27 RYU24_08370 IPR029046 Lipoprotein localisation LolA/LolB/LppX RYU24_08370 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RYU24_08370 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria RYU24_08390 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily RYU24_08390 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RYU24_08390 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_08390 IPR015866 Serine-tRNA synthetase, type1, N-terminal RYU24_08390 IPR033729 Serine-tRNA ligase catalytic core domain RYU24_08390 IPR002317 Serine-tRNA ligase, type1 RYU24_08390 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RYU24_08400 IPR037115 Sirohaem synthase, dimerisation domain superfamily RYU24_08400 IPR012409 Sirohaem synthase RYU24_08400 IPR028281 Siroheme synthase, central domain RYU24_08400 IPR019478 Sirohaem synthase, dimerisation domain RYU24_08400 IPR006367 Sirohaem synthase, N-terminal RYU24_08400 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RYU24_08400 IPR000878 Tetrapyrrole methylase RYU24_08400 IPR006366 Uroporphyrin-III C-methyltransferase RYU24_08400 IPR035996 Tetrapyrrole methylase superfamily RYU24_08400 IPR014777 Tetrapyrrole methylase, subdomain 1 RYU24_08400 IPR014776 Tetrapyrrole methylase, subdomain 2 RYU24_08400 IPR036291 NAD(P)-binding domain superfamily RYU24_08410 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_08410 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RYU24_08410 IPR001537 tRNA/rRNA methyltransferase, SpoU type RYU24_08410 IPR029028 Alpha/beta knot methyltransferases RYU24_08440 IPR002293 Amino acid/polyamine transporter I RYU24_08450 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RYU24_08450 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA RYU24_08450 IPR039697 Iron-type alcohol dehydrogenase-like RYU24_08470 IPR000544 Octanoyltransferase RYU24_08470 IPR020605 Octanoyltransferase, conserved site RYU24_08470 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RYU24_08490 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RYU24_08490 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_08490 IPR028630 RNA polymerase sigma factor RpoD RYU24_08490 IPR013324 RNA polymerase sigma factor, region 3/4-like RYU24_08490 IPR042189 Sigma-70 factor, region 1.1 superfamily RYU24_08490 IPR009042 RNA polymerase sigma-70 region 1.2 RYU24_08490 IPR000943 RNA polymerase sigma-70 RYU24_08490 IPR014284 RNA polymerase sigma-70 like domain RYU24_08490 IPR007630 RNA polymerase sigma-70 region 4 RYU24_08490 IPR013325 RNA polymerase sigma factor, region 2 RYU24_08490 IPR007627 RNA polymerase sigma-70 region 2 RYU24_08490 IPR007624 RNA polymerase sigma-70 region 3 RYU24_08490 IPR007631 RNA polymerase sigma factor 70, non-essential domain RYU24_08490 IPR007127 RNA polymerase sigma factor 70, region 1.1 RYU24_08530 IPR032816 SNARE associated Golgi protein RYU24_08550 IPR020936 Uncharacterised protein family UPF0176 RYU24_08550 IPR036873 Rhodanese-like domain superfamily RYU24_08550 IPR001763 Rhodanese-like domain RYU24_08550 IPR040503 UPF0176, acylphosphatase-like domain RYU24_08580 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RYU24_08580 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RYU24_08610 IPR003190 Aspartate decarboxylase RYU24_08610 IPR009010 Aspartate decarboxylase-like domain superfamily RYU24_08620 IPR001328 Peptidyl-tRNA hydrolase RYU24_08620 IPR018171 Peptidyl-tRNA hydrolase, conserved site RYU24_08620 IPR036416 Peptidyl-tRNA hydrolase superfamily RYU24_08630 IPR020055 Ribosomal protein L25, short-form RYU24_08630 IPR029751 Ribosomal protein L25 RYU24_08630 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal RYU24_08630 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily RYU24_08640 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type RYU24_08640 IPR005946 Ribose-phosphate pyrophosphokinase RYU24_08640 IPR029057 Phosphoribosyltransferase-like RYU24_08640 IPR000836 Phosphoribosyltransferase domain RYU24_08640 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RYU24_08640 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RYU24_08650 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_08650 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_08650 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RYU24_08650 IPR006204 GHMP kinase N-terminal domain RYU24_08650 IPR036554 GHMP kinase, C-terminal domain superfamily RYU24_08650 IPR013750 GHMP kinase, C-terminal domain RYU24_08660 IPR029046 Lipoprotein localisation LolA/LolB/LppX RYU24_08660 IPR004565 Outer membrane lipoprotein LolB RYU24_08680 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RYU24_08680 IPR036291 NAD(P)-binding domain superfamily RYU24_08680 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily RYU24_08680 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily RYU24_08680 IPR018214 Glutamyl-tRNA reductase, conserved site RYU24_08680 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RYU24_08680 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RYU24_08680 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RYU24_08690 IPR006171 TOPRIM domain RYU24_08690 IPR034151 Bacterial DnaG primase, TOPRIM domain RYU24_08690 IPR002694 Zinc finger, CHC2-type RYU24_08690 IPR036977 DNA Primase, CHC2-type zinc finger RYU24_08690 IPR013173 DNA primase DnaG, DnaB-binding domain RYU24_08690 IPR030846 DNA primase DnaG, bacteria RYU24_08690 IPR019475 DNA primase, DnaB-helicase binding domain RYU24_08690 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily RYU24_08690 IPR013264 DNA primase, catalytic core, N-terminal RYU24_08690 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RYU24_08690 IPR006295 DNA primase, DnaG RYU24_08700 IPR017689 Outer membrane protein assembly factor BamD RYU24_08700 IPR039565 Outer membrane lipoprotein BamD-like RYU24_08700 IPR011990 Tetratricopeptide-like helical domain superfamily RYU24_08710 IPR036986 RNA-binding S4 domain superfamily RYU24_08710 IPR002942 RNA-binding S4 domain RYU24_08710 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_08710 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RYU24_08710 IPR006225 Pseudouridine synthase, RluC/RluD RYU24_08710 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_08720 IPR003730 Multi-copper polyphenol oxidoreductase RYU24_08720 IPR038371 Multi-copper polyphenol oxidoreductase superfamily RYU24_08720 IPR011324 Cytotoxic necrotizing factor-like, catalytic RYU24_08730 IPR029039 Flavoprotein-like superfamily RYU24_08730 IPR005025 NADPH-dependent FMN reductase-like RYU24_08730 IPR008254 Flavodoxin/nitric oxide synthase RYU24_08740 IPR023620 Small protein B RYU24_08740 IPR000037 SsrA-binding protein RYU24_08740 IPR020081 SsrA-binding protein, conserved site RYU24_08750 IPR004821 Cytidyltransferase-like domain RYU24_08750 IPR001980 Phosphopantetheine adenylyltransferase RYU24_08750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_08760 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RYU24_08760 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_08790 IPR011004 Trimeric LpxA-like superfamily RYU24_08790 IPR018357 Hexapeptide transferase, conserved site RYU24_08790 IPR001451 Hexapeptide repeat RYU24_08800 IPR035959 RutC-like superfamily RYU24_08800 IPR006175 YjgF/YER057c/UK114 family RYU24_08800 IPR038743 YjgH-like RYU24_08810 IPR009057 Homeobox-like domain superfamily RYU24_08810 IPR001647 DNA-binding HTH domain, TetR-type RYU24_08810 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RYU24_08820 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily RYU24_08820 IPR023459 Transcription elongation factor GreA/GreB family RYU24_08820 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RYU24_08820 IPR028624 Transcription elongation factor GreA/GreB RYU24_08820 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RYU24_08820 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RYU24_08820 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily RYU24_08820 IPR006359 Transcription elongation factor GreA RYU24_08830 IPR016185 Pre-ATP-grasp domain superfamily RYU24_08830 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain RYU24_08830 IPR036914 Methylglyoxal synthase-like domain superfamily RYU24_08830 IPR011607 Methylglyoxal synthase-like domain RYU24_08830 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RYU24_08830 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RYU24_08830 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RYU24_08830 IPR006275 Carbamoyl-phosphate synthase, large subunit RYU24_08830 IPR011761 ATP-grasp fold RYU24_08830 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily RYU24_08840 IPR029062 Class I glutamine amidotransferase-like RYU24_08840 IPR017926 Glutamine amidotransferase RYU24_08840 IPR006274 Carbamoyl-phosphate synthase, small subunit RYU24_08840 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain RYU24_08840 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily RYU24_08840 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain RYU24_08880 IPR017924 RNA-binding protein YhbY RYU24_08880 IPR001890 RNA-binding, CRM domain RYU24_08880 IPR035920 YhbY-like superfamily RYU24_08890 IPR015507 Ribosomal RNA large subunit methyltransferase E RYU24_08890 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RYU24_08890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_08900 IPR003959 ATPase, AAA-type, core RYU24_08900 IPR005936 Peptidase, FtsH RYU24_08900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_08900 IPR011546 Peptidase M41, FtsH extracellular RYU24_08900 IPR000642 Peptidase M41 RYU24_08900 IPR037219 Peptidase M41-like RYU24_08900 IPR003960 ATPase, AAA-type, conserved site RYU24_08900 IPR041569 AAA ATPase, AAA+ lid domain RYU24_08900 IPR003593 AAA+ ATPase domain RYU24_08920 IPR000489 Pterin-binding domain RYU24_08920 IPR006390 Dihydropteroate synthase RYU24_08920 IPR011005 Dihydropteroate synthase-like RYU24_08980 IPR000644 CBS domain RYU24_08980 IPR002550 CNNM, transmembrane domain RYU24_08980 IPR036318 FAD-binding, type PCMH-like superfamily RYU24_08980 IPR016169 FAD-binding, type PCMH, subdomain 2 RYU24_08980 IPR005170 Transporter-associated domain RYU24_08990 IPR005119 LysR, substrate-binding RYU24_08990 IPR000847 Transcription regulator HTH, LysR RYU24_08990 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_08990 IPR036390 Winged helix DNA-binding domain superfamily RYU24_09000 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_09000 IPR040442 Pyruvate kinase-like domain superfamily RYU24_09000 IPR039556 ICL/PEPM domain RYU24_09000 IPR006254 Isocitrate lyase RYU24_09010 IPR001036 Acriflavin resistance protein RYU24_09010 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RYU24_09010 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RYU24_09020 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RYU24_09020 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RYU24_09020 IPR001036 Acriflavin resistance protein RYU24_09030 IPR006669 Magnesium transporter MgtE RYU24_09030 IPR006667 SLC41 divalent cation transporters, integral membrane domain RYU24_09030 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily RYU24_09030 IPR038076 MgtE, N-terminal domain superfamily RYU24_09030 IPR000644 CBS domain RYU24_09030 IPR038048 Magnesium transporter MgtE, transmembrane domain RYU24_09030 IPR006668 Magnesium transporter, MgtE intracellular domain RYU24_09050 IPR022919 Peptidase M48, protease HtpX, putative RYU24_09050 IPR001915 Peptidase M48 RYU24_09060 IPR011055 Duplicated hybrid motif RYU24_09060 IPR008258 Transglycosylase SLT domain 1 RYU24_09060 IPR000189 Prokaryotic transglycosylase, active site RYU24_09060 IPR010090 Phage tail tape measure protein RYU24_09060 IPR016047 Peptidase M23 RYU24_09060 IPR023346 Lysozyme-like domain superfamily RYU24_09070 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase RYU24_09070 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type RYU24_09070 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RYU24_09070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_09090 IPR000189 Prokaryotic transglycosylase, active site RYU24_09090 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RYU24_09090 IPR023346 Lysozyme-like domain superfamily RYU24_09090 IPR008258 Transglycosylase SLT domain 1 RYU24_09090 IPR023703 Membrane-bound lytic murein transglycosylase F RYU24_09100 IPR006358 Transcription elongation factor GreB RYU24_09100 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily RYU24_09100 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RYU24_09100 IPR028624 Transcription elongation factor GreA/GreB RYU24_09100 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RYU24_09100 IPR023459 Transcription elongation factor GreA/GreB family RYU24_09100 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RYU24_09100 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily RYU24_09110 IPR036390 Winged helix DNA-binding domain superfamily RYU24_09110 IPR000847 Transcription regulator HTH, LysR RYU24_09110 IPR005119 LysR, substrate-binding RYU24_09110 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_09120 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_09120 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_09120 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_09120 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_09120 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_09120 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_09120 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_09130 IPR038251 PdxB, dimerisation domain superfamily RYU24_09130 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RYU24_09130 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RYU24_09130 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RYU24_09130 IPR020921 Erythronate-4-phosphate dehydrogenase RYU24_09130 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain RYU24_09130 IPR036291 NAD(P)-binding domain superfamily RYU24_09140 IPR004525 Elongation factor P--(R)-beta-lysine ligase RYU24_09140 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_09140 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RYU24_09140 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RYU24_09150 IPR039143 Glucosamine 6-phosphate N-acetyltransferase RYU24_09150 IPR016181 Acyl-CoA N-acyltransferase RYU24_09150 IPR000182 GNAT domain RYU24_09160 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RYU24_09160 IPR002646 Poly A polymerase, head domain RYU24_09160 IPR003607 HD/PDEase domain RYU24_09160 IPR012006 tRNA nucleotidyltransferase, proteobacteria RYU24_09170 IPR042113 Phosphate acetyltransferase, domain 1 RYU24_09170 IPR015884 Malic enzyme, conserved site RYU24_09170 IPR012301 Malic enzyme, N-terminal domain RYU24_09170 IPR037062 Malic enzyme, N-terminal domain superfamily RYU24_09170 IPR012302 Malic enzyme, NAD-binding RYU24_09170 IPR012188 NAD(P)-dependent malic enzyme RYU24_09170 IPR002505 Phosphate acetyl/butaryl transferase RYU24_09170 IPR042112 Phosphate acetyltransferase, domain 2 RYU24_09170 IPR036291 NAD(P)-binding domain superfamily RYU24_09180 IPR001633 EAL domain RYU24_09180 IPR005330 MHYT domain RYU24_09180 IPR000160 GGDEF domain RYU24_09180 IPR035919 EAL domain superfamily RYU24_09180 IPR029787 Nucleotide cyclase RYU24_09190 IPR015947 PUA-like superfamily RYU24_09190 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_09190 IPR006700 Ribosomal RNA small subunit methyltransferase E RYU24_09190 IPR029028 Alpha/beta knot methyltransferases RYU24_09200 IPR003171 Methylenetetrahydrofolate reductase RYU24_09200 IPR029041 FAD-linked oxidoreductase-like RYU24_09200 IPR004620 5,10-methylenetetrahydrofolate reductase RYU24_09210 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RYU24_09210 IPR042172 Adenosylhomocysteinase-like superfamily RYU24_09210 IPR000043 Adenosylhomocysteinase-like RYU24_09210 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RYU24_09210 IPR036291 NAD(P)-binding domain superfamily RYU24_09250 IPR006597 Sel1-like repeat RYU24_09250 IPR011990 Tetratricopeptide-like helical domain superfamily RYU24_09270 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_09270 IPR003593 AAA+ ATPase domain RYU24_09270 IPR004504 DNA repair protein RadA RYU24_09270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_09270 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RYU24_09270 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_09270 IPR041166 LapB, rubredoxin metal binding domain RYU24_09290 IPR001463 Sodium:alanine symporter RYU24_09300 IPR004841 Amino acid permease/ SLC12A domain RYU24_09300 IPR004840 Amino acid permease, conserved site RYU24_09320 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RYU24_09320 IPR002986 Diaminopimelate decarboxylase, LysA RYU24_09320 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RYU24_09320 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RYU24_09320 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RYU24_09320 IPR000183 Ornithine/DAP/Arg decarboxylase RYU24_09320 IPR029066 PLP-binding barrel RYU24_09330 IPR018510 Diaminopimelate epimerase, active site RYU24_09330 IPR001653 Diaminopimelate epimerase, DapF RYU24_09340 IPR000073 Alpha/beta hydrolase fold-1 RYU24_09340 IPR029058 Alpha/Beta hydrolase fold RYU24_09340 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase RYU24_09350 IPR002104 Integrase, catalytic domain RYU24_09350 IPR011010 DNA breaking-rejoining enzyme, catalytic core RYU24_09350 IPR013762 Integrase-like, catalytic domain superfamily RYU24_09350 IPR010998 Integrase/recombinase, N-terminal RYU24_09350 IPR023009 Tyrosine recombinase XerC/XerD RYU24_09350 IPR011931 Tyrosine recombinase XerC RYU24_09350 IPR004107 Integrase, SAM-like, N-terminal RYU24_09370 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RYU24_09370 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RYU24_09370 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_09370 IPR036390 Winged helix DNA-binding domain superfamily RYU24_09370 IPR011008 Dimeric alpha-beta barrel RYU24_09370 IPR000485 AsnC-type HTH domain RYU24_09370 IPR019888 Transcription regulator AsnC-type RYU24_09380 IPR004778 Homoserine/Threonine efflux protein RYU24_09380 IPR001123 Amino acid exporter protein, LeuE-type RYU24_09390 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal RYU24_09390 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RYU24_09390 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RYU24_09390 IPR012255 Electron transfer flavoprotein, beta subunit RYU24_09390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_09400 IPR029035 DHS-like NAD/FAD-binding domain superfamily RYU24_09400 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RYU24_09400 IPR001308 Electron transfer flavoprotein alpha subunit/FixB RYU24_09400 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal RYU24_09400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_09400 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RYU24_09400 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RYU24_09420 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat RYU24_09420 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RYU24_09420 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RYU24_09420 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RYU24_09420 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RYU24_09420 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RYU24_09420 IPR005743 DNA gyrase, subunit A RYU24_09470 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RYU24_09490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_09490 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_09490 IPR022278 Phosphoserine aminotransferase RYU24_09490 IPR000192 Aminotransferase class V domain RYU24_09490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_09490 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RYU24_09510 IPR003791 Protein of unknown function UPF0178 RYU24_09540 IPR003838 ABC transporter permease protein domain RYU24_09540 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E RYU24_09540 IPR025857 MacB-like periplasmic core domain RYU24_09550 IPR015854 ABC transporter, lipoprotein release, LolD RYU24_09550 IPR003593 AAA+ ATPase domain RYU24_09550 IPR003439 ABC transporter-like RYU24_09550 IPR017871 ABC transporter, conserved site RYU24_09550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_09560 IPR035681 ComA-like, MBL domain RYU24_09560 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_09560 IPR001279 Metallo-beta-lactamase RYU24_09560 IPR025405 Domain of unknown function DUF4131 RYU24_09560 IPR004797 Competence protein ComEC/Rec2 RYU24_09560 IPR004477 ComEC/Rec2-related protein RYU24_09580 IPR002142 Peptidase S49 RYU24_09580 IPR023171 Na/H antiporter domain superfamily RYU24_09580 IPR004670 Na+/H+ antiporter NhaA RYU24_09580 IPR029045 ClpP/crotonase-like domain superfamily RYU24_09590 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RYU24_09590 IPR000639 Epoxide hydrolase-like RYU24_09590 IPR000073 Alpha/beta hydrolase fold-1 RYU24_09590 IPR029058 Alpha/Beta hydrolase fold RYU24_09600 IPR036477 Formyl transferase, N-terminal domain superfamily RYU24_09600 IPR002376 Formyl transferase, N-terminal RYU24_09600 IPR004607 Phosphoribosylglycinamide formyltransferase RYU24_09600 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RYU24_09610 IPR016188 PurM-like, N-terminal domain RYU24_09610 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RYU24_09610 IPR036921 PurM-like, N-terminal domain superfamily RYU24_09610 IPR036676 PurM-like, C-terminal domain superfamily RYU24_09610 IPR010918 PurM-like, C-terminal domain RYU24_09620 IPR002549 Transmembrane protein TqsA-like RYU24_09630 IPR001957 Chromosomal replication control, initiator DnaA RYU24_09630 IPR020591 Chromosomal replication control, initiator DnaA-like RYU24_09630 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RYU24_09630 IPR013317 Chromosomal replication initiator protein DnaA RYU24_09630 IPR013159 Chromosomal replication initiator, DnaA C-terminal RYU24_09630 IPR024633 DnaA N-terminal domain RYU24_09630 IPR038454 DnaA, N-terminal domain superfamily RYU24_09630 IPR010921 Trp repressor/replication initiator RYU24_09630 IPR003593 AAA+ ATPase domain RYU24_09630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_09690 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RYU24_09690 IPR029064 50S ribosomal protein L30e-like RYU24_09690 IPR001537 tRNA/rRNA methyltransferase, SpoU type RYU24_09690 IPR029028 Alpha/beta knot methyltransferases RYU24_09690 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_09700 IPR028343 Fructose-1,6-bisphosphatase RYU24_09700 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal RYU24_09700 IPR000146 Fructose-1,6-bisphosphatase class 1 RYU24_09720 IPR006665 OmpA-like domain RYU24_09720 IPR006690 Outer membrane protein, OmpA-like, conserved site RYU24_09720 IPR036737 OmpA-like domain superfamily RYU24_09720 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal RYU24_09720 IPR006664 Outer membrane protein, bacterial RYU24_09720 IPR039001 Peptidoglycan-associated lipoprotein RYU24_09730 IPR011659 WD40-like Beta Propeller RYU24_09730 IPR014167 Tol-Pal system protein TolB RYU24_09730 IPR007195 TolB, N-terminal RYU24_09730 IPR036752 TolB, N-terminal domain superfamily RYU24_09730 IPR011042 Six-bladed beta-propeller, TolB-like RYU24_09750 IPR003400 Biopolymer transport protein ExbD/TolR RYU24_09750 IPR014168 Tol-Pal system protein TolR RYU24_09760 IPR002898 MotA/TolQ/ExbB proton channel RYU24_09760 IPR014163 Tol-Pal system, TolQ RYU24_09770 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RYU24_09770 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site RYU24_09770 IPR029069 HotDog domain superfamily RYU24_09770 IPR006683 Thioesterase domain RYU24_09770 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase RYU24_09780 IPR002933 Peptidase M20 RYU24_09780 IPR036264 Bacterial exopeptidase dimerisation domain RYU24_09780 IPR011650 Peptidase M20, dimerisation domain RYU24_09780 IPR017439 Amidohydrolase RYU24_09790 IPR036390 Winged helix DNA-binding domain superfamily RYU24_09790 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_09790 IPR008823 RuvB C-terminal winged helix domain RYU24_09790 IPR004605 DNA helicase, Holliday junction RuvB-type RYU24_09790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_09790 IPR041445 RuvB, AAA lid domain RYU24_09790 IPR003593 AAA+ ATPase domain RYU24_09790 IPR008824 RuvB-like P-loop domain RYU24_09800 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RYU24_09800 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RYU24_09800 IPR012340 Nucleic acid-binding, OB-fold RYU24_09800 IPR000085 Bacterial DNA recombination protein RuvA RYU24_09800 IPR010994 RuvA domain 2-like RYU24_09800 IPR011114 Holliday junction DNA helicase RuvA, C-terminal RYU24_09800 IPR036267 RuvA, C-terminal domain superfamily RYU24_09810 IPR006674 HD domain RYU24_09810 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily RYU24_09810 IPR023024 dNTP triphosphohydrolase, type 3 RYU24_09810 IPR006261 dNTP triphosphohydrolase RYU24_09810 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal RYU24_09810 IPR003607 HD/PDEase domain RYU24_09820 IPR017850 Alkaline-phosphatase-like, core domain superfamily RYU24_09820 IPR024607 Sulfatase, conserved site RYU24_09820 IPR000917 Sulfatase, N-terminal RYU24_09830 IPR017850 Alkaline-phosphatase-like, core domain superfamily RYU24_09830 IPR024607 Sulfatase, conserved site RYU24_09830 IPR000917 Sulfatase, N-terminal RYU24_09840 IPR025161 Putative transposase IS4/IS5 family RYU24_09850 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily RYU24_09850 IPR036921 PurM-like, N-terminal domain superfamily RYU24_09850 IPR036676 PurM-like, C-terminal domain superfamily RYU24_09850 IPR010073 Phosphoribosylformylglycinamidine synthase PurL RYU24_09850 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain RYU24_09850 IPR017926 Glutamine amidotransferase RYU24_09850 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal RYU24_09850 IPR029062 Class I glutamine amidotransferase-like RYU24_09850 IPR010918 PurM-like, C-terminal domain RYU24_09880 IPR005119 LysR, substrate-binding RYU24_09880 IPR000847 Transcription regulator HTH, LysR RYU24_09880 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_09880 IPR036390 Winged helix DNA-binding domain superfamily RYU24_09900 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RYU24_09900 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RYU24_09900 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily RYU24_09900 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria RYU24_09920 IPR000415 Nitroreductase-like RYU24_09920 IPR029479 Nitroreductase RYU24_09930 IPR029045 ClpP/crotonase-like domain superfamily RYU24_09930 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_09930 IPR014748 Enoyl-CoA hydratase, C-terminal RYU24_09940 IPR004821 Cytidyltransferase-like domain RYU24_09940 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain RYU24_09940 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_09940 IPR020084 NUDIX hydrolase, conserved site RYU24_09940 IPR000086 NUDIX hydrolase domain RYU24_09940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_09950 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RYU24_09950 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily RYU24_09950 IPR023480 Uncharacterised protein family UPF0312/YceI RYU24_09960 IPR036390 Winged helix DNA-binding domain superfamily RYU24_09960 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_09960 IPR000847 Transcription regulator HTH, LysR RYU24_09960 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria RYU24_09960 IPR017685 HTH-type transcriptional regulator ArgP RYU24_09960 IPR005119 LysR, substrate-binding RYU24_09970 IPR023445 Arginine exporter protein ArgO, enterobacteria RYU24_09970 IPR001123 Amino acid exporter protein, LeuE-type RYU24_09970 IPR004777 L-lysine exporter/arginine exporter RYU24_09980 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RYU24_09980 IPR036249 Thioredoxin-like superfamily RYU24_09980 IPR013766 Thioredoxin domain RYU24_10000 IPR018317 Queuosine biosynthesis protein QueC RYU24_10000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_10010 IPR024924 7-carboxy-7-deazaguanine synthase-like RYU24_10010 IPR013785 Aldolase-type TIM barrel RYU24_10010 IPR007197 Radical SAM RYU24_10020 IPR011004 Trimeric LpxA-like superfamily RYU24_10020 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily RYU24_10020 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RYU24_10020 IPR001451 Hexapeptide repeat RYU24_10020 IPR018357 Hexapeptide transferase, conserved site RYU24_10020 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RYU24_10060 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain RYU24_10060 IPR005119 LysR, substrate-binding RYU24_10060 IPR000847 Transcription regulator HTH, LysR RYU24_10060 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_10060 IPR036390 Winged helix DNA-binding domain superfamily RYU24_10070 IPR003593 AAA+ ATPase domain RYU24_10070 IPR003439 ABC transporter-like RYU24_10070 IPR017871 ABC transporter, conserved site RYU24_10070 IPR008995 Molybdate/tungstate binding, C-terminal RYU24_10070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_10070 IPR005666 Sulphate transport system permease protein 1 RYU24_10070 IPR024765 TOBE-like domain RYU24_10070 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal RYU24_10080 IPR005667 Sulphate ABC transporter permease protein 2 RYU24_10080 IPR035906 MetI-like superfamily RYU24_10080 IPR011866 Sulphate ABC transporter, permease protein CysW RYU24_10080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_10090 IPR011865 Sulphate ABC transporter, permease protein CysT RYU24_10090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_10090 IPR005667 Sulphate ABC transporter permease protein 2 RYU24_10090 IPR035906 MetI-like superfamily RYU24_10110 IPR000957 Sulphate/thiosulphate-binding, conserved site RYU24_10110 IPR034408 Sulphate/thiosulphate-binding site RYU24_10110 IPR005669 Thiosulphate/Sulfate-binding protein RYU24_10120 IPR005669 Thiosulphate/Sulfate-binding protein RYU24_10120 IPR000957 Sulphate/thiosulphate-binding, conserved site RYU24_10120 IPR034408 Sulphate/thiosulphate-binding site RYU24_10140 IPR003770 Endolytic murein transglycosylase RYU24_10150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_10150 IPR018094 Thymidylate kinase RYU24_10150 IPR039430 Thymidylate kinase-like domain RYU24_10170 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RYU24_10170 IPR005288 L-aspartate oxidase RYU24_10170 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RYU24_10170 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RYU24_10170 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RYU24_10170 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_10180 IPR001478 PDZ domain RYU24_10180 IPR036034 PDZ superfamily RYU24_10180 IPR011782 Peptidase S1C, Do RYU24_10180 IPR009003 Peptidase S1, PA clan RYU24_10180 IPR001940 Peptidase S1C RYU24_10200 IPR000795 Transcription factor, GTP-binding domain RYU24_10200 IPR005225 Small GTP-binding protein domain RYU24_10200 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_10200 IPR035654 Elongation factor 4, domain IV RYU24_10200 IPR013842 GTP-binding protein LepA, C-terminal RYU24_10200 IPR000640 Elongation factor EFG, domain V-like RYU24_10200 IPR031157 Tr-type G domain, conserved site RYU24_10200 IPR004161 Translation elongation factor EFTu-like, domain 2 RYU24_10200 IPR035647 EF-G domain III/V-like RYU24_10200 IPR006297 Elongation factor 4 RYU24_10200 IPR038363 LepA, C-terminal domain superfamily RYU24_10210 IPR019533 Peptidase S26 RYU24_10210 IPR019756 Peptidase S26A, signal peptidase I, serine active site RYU24_10210 IPR000223 Peptidase S26A, signal peptidase I RYU24_10210 IPR019758 Peptidase S26A, signal peptidase I, conserved site RYU24_10210 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RYU24_10210 IPR036286 LexA/Signal peptidase-like superfamily RYU24_10230 IPR000999 Ribonuclease III domain RYU24_10230 IPR014720 Double-stranded RNA-binding domain RYU24_10230 IPR011907 Ribonuclease III RYU24_10230 IPR036389 Ribonuclease III, endonuclease domain superfamily RYU24_10240 IPR005662 GTP-binding protein Era RYU24_10240 IPR006073 GTP binding domain RYU24_10240 IPR015946 K homology domain-like, alpha/beta RYU24_10240 IPR004044 K Homology domain, type 2 RYU24_10240 IPR009019 K homology domain superfamily, prokaryotic type RYU24_10240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_10240 IPR030388 Era-type guanine nucleotide-binding (G) domain RYU24_10240 IPR005225 Small GTP-binding protein domain RYU24_10260 IPR037278 ARFGAP/RecO-like zinc finger RYU24_10260 IPR022572 DNA replication/recombination mediator RecO, N-terminal RYU24_10260 IPR012340 Nucleic acid-binding, OB-fold RYU24_10260 IPR003717 Recombination protein O, RecO RYU24_10270 IPR013785 Aldolase-type TIM barrel RYU24_10270 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RYU24_10270 IPR036130 Pyridoxine 5'-phosphate synthase RYU24_10280 IPR010386 tRNA-hydroxylase MiaE RYU24_10280 IPR009078 Ferritin-like superfamily RYU24_10280 IPR012347 Ferritin-like RYU24_10320 IPR002528 Multi antimicrobial extrusion protein RYU24_10320 IPR022913 Multidrug resistance protein MdtK RYU24_10330 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_10330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_10330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_10330 IPR004839 Aminotransferase, class I/classII RYU24_10330 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RYU24_10340 IPR036005 Creatinase/aminopeptidase-like RYU24_10340 IPR000994 Peptidase M24 RYU24_10340 IPR001714 Peptidase M24, methionine aminopeptidase RYU24_10340 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RYU24_10350 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily RYU24_10350 IPR018130 Ribosomal protein S2, conserved site RYU24_10350 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RYU24_10350 IPR001865 Ribosomal protein S2 RYU24_10360 IPR036402 Elongation factor Ts, dimerisation domain superfamily RYU24_10360 IPR001816 Translation elongation factor EFTs/EF1B RYU24_10360 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RYU24_10360 IPR018101 Translation elongation factor Ts, conserved site RYU24_10360 IPR009060 UBA-like superfamily RYU24_10390 IPR007730 Sporulation-like domain RYU24_10390 IPR036908 RlpA-like domain superfamily RYU24_10390 IPR009009 RlpA-like protein, double-psi beta-barrel domain RYU24_10390 IPR012997 Rare lipoprotein A RYU24_10390 IPR034718 Endolytic peptidoglycan transglycosylase RlpA RYU24_10400 IPR023346 Lysozyme-like domain superfamily RYU24_10400 IPR011757 Lytic transglycosylase MltB RYU24_10400 IPR031304 Transglycosylase SLT domain 2 RYU24_10420 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RYU24_10420 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RYU24_10420 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RYU24_10430 IPR013525 ABC-2 type transporter RYU24_10430 IPR000412 ABC-2 transporter RYU24_10440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_10440 IPR003439 ABC transporter-like RYU24_10440 IPR017871 ABC transporter, conserved site RYU24_10440 IPR003593 AAA+ ATPase domain RYU24_10530 IPR039429 Serine hydroxymethyltransferase-like domain RYU24_10530 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RYU24_10530 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_10530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_10530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_10530 IPR001085 Serine hydroxymethyltransferase RYU24_10550 IPR005134 Uncharacterised protein family UPF0114 RYU24_10550 IPR020761 Uncharacterised protein family UPF0114, bacteria RYU24_10570 IPR008863 Toxic anion resistance RYU24_10590 IPR036249 Thioredoxin-like superfamily RYU24_10590 IPR012336 Thioredoxin-like fold RYU24_10590 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RYU24_10590 IPR023753 FAD/NAD(P)-binding domain RYU24_10590 IPR012081 Alkyl hydroperoxide reductase subunit F RYU24_10590 IPR002109 Glutaredoxin RYU24_10590 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_10600 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_10600 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RYU24_10610 IPR001539 Peptidase U32 RYU24_10610 IPR032525 Peptidase family U32, C-terminal RYU24_10620 IPR011789 Cu(I)-responsive transcriptional regulator RYU24_10620 IPR000551 MerR-type HTH domain RYU24_10620 IPR009061 Putative DNA-binding domain superfamily RYU24_10660 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RYU24_10660 IPR001479 Quinoprotein dehydrogenase, conserved site RYU24_10660 IPR002372 Pyrrolo-quinoline quinone repeat RYU24_10660 IPR017511 PQQ-dependent membrane bound dehydrogenase RYU24_10660 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RYU24_10670 IPR017938 Riboflavin synthase-like beta-barrel RYU24_10670 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_10670 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_10670 IPR033892 Ferredoxin--NADP reductase, bacteria RYU24_10670 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RYU24_10670 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_10670 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RYU24_10680 IPR023370 TrmO-like, N-terminal domain RYU24_10680 IPR041369 TrmO, C-terminal RYU24_10680 IPR023368 Uncharacterised protein family UPF0066, conserved site RYU24_10680 IPR040372 YaeB-like RYU24_10680 IPR036413 YaeB-like superfamily RYU24_10680 IPR036414 YaeB, N-terminal domain superfamily RYU24_10720 IPR042181 Type II secretion system, protein E, N-terminal RYU24_10720 IPR007831 General secretory system II, protein E, N-terminal RYU24_10720 IPR001482 Type II/IV secretion system protein RYU24_10720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_10720 IPR013374 ATPase, type IV, pilus assembly, PilB RYU24_10720 IPR003593 AAA+ ATPase domain RYU24_10720 IPR037257 General secretory system II, protein E, N-terminal superfamily RYU24_10740 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_10740 IPR001789 Signal transduction response regulator, receiver domain RYU24_10740 IPR039420 Transcriptional regulatory protein WalR-like RYU24_10740 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_10740 IPR011006 CheY-like superfamily RYU24_10740 IPR001867 OmpR/PhoB-type DNA-binding domain RYU24_10750 IPR013727 Two-component sensor kinase, N-terminal RYU24_10750 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_10750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_10750 IPR005467 Histidine kinase domain RYU24_10750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_10750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_10750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_10770 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_10770 IPR003561 Mutator MutT RYU24_10770 IPR020476 NUDIX hydrolase RYU24_10770 IPR020084 NUDIX hydrolase, conserved site RYU24_10770 IPR000086 NUDIX hydrolase domain RYU24_10790 IPR028166 Bifunctional transglycosylase second domain RYU24_10790 IPR001460 Penicillin-binding protein, transpeptidase RYU24_10790 IPR036950 Penicillin binding protein transglycosylase domain RYU24_10790 IPR023346 Lysozyme-like domain superfamily RYU24_10790 IPR001264 Glycosyl transferase, family 51 RYU24_10790 IPR012338 Beta-lactamase/transpeptidase-like RYU24_10790 IPR011813 Penicillin-binding protein 1B RYU24_10800 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal RYU24_10800 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RYU24_10800 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RYU24_10800 IPR002504 NAD kinase RYU24_10810 IPR009749 Protein of unknown function DUF1315 RYU24_10820 IPR005940 Anthranilate phosphoribosyl transferase RYU24_10820 IPR000312 Glycosyl transferase, family 3 RYU24_10820 IPR017459 Glycosyl transferase family 3, N-terminal domain RYU24_10820 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily RYU24_10820 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily RYU24_10830 IPR023954 C4-dicarboxylate transport protein RYU24_10830 IPR001991 Sodium:dicarboxylate symporter RYU24_10830 IPR018107 Sodium:dicarboxylate symporter, conserved site RYU24_10830 IPR036458 Sodium:dicarboxylate symporter superfamily RYU24_10850 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_10850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_10850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_10850 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_10850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_10850 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_10850 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_10860 IPR029062 Class I glutamine amidotransferase-like RYU24_10860 IPR002818 DJ-1/PfpI RYU24_10860 IPR006286 Deglycase PfpI RYU24_10870 IPR002818 DJ-1/PfpI RYU24_10870 IPR006286 Deglycase PfpI RYU24_10870 IPR029062 Class I glutamine amidotransferase-like RYU24_10880 IPR001086 Prephenate dehydratase RYU24_10880 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain RYU24_10880 IPR036979 Chorismate mutase domain superfamily RYU24_10880 IPR036263 Chorismate mutase type II superfamily RYU24_10880 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RYU24_10880 IPR002912 ACT domain RYU24_10880 IPR002701 Chorismate mutase II, prokaryotic-type RYU24_10880 IPR018528 Prephenate dehydratase, conserved site RYU24_10890 IPR004839 Aminotransferase, class I/classII RYU24_10890 IPR005861 Histidinol-phosphate aminotransferase family RYU24_10890 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_10890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_10890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_10890 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RYU24_10900 IPR001986 Enolpyruvate transferase domain RYU24_10900 IPR036968 Enolpyruvate transferase domain superfamily RYU24_10900 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RYU24_10900 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RYU24_10900 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RYU24_10940 IPR005583 Peroxide stress protein YaaA RYU24_10950 IPR006043 Xanthine/uracil/vitamin C permease RYU24_10950 IPR026033 Azaguanine-like transporters RYU24_10960 IPR001365 Adenosine/AMP deaminase domain RYU24_10960 IPR028892 Adenine deaminase type 2 RYU24_10960 IPR006330 Adenosine/adenine deaminase RYU24_10960 IPR032466 Metal-dependent hydrolase RYU24_10990 IPR001352 Ribonuclease HII/HIII RYU24_10990 IPR024567 Ribonuclease HII/HIII domain RYU24_10990 IPR012337 Ribonuclease H-like superfamily RYU24_10990 IPR022898 Ribonuclease HII RYU24_10990 IPR036397 Ribonuclease H superfamily RYU24_11000 IPR003751 Translational regulator CsrA RYU24_11000 IPR036107 Carbon storage regulator superfamily RYU24_11010 IPR036393 Acetylglutamate kinase-like superfamily RYU24_11010 IPR002912 ACT domain RYU24_11010 IPR041740 Aspartokinase catalytic domain RYU24_11010 IPR001048 Aspartate/glutamate/uridylate kinase RYU24_11010 IPR005260 Aspartate kinase, monofunctional class RYU24_11010 IPR001341 Aspartate kinase RYU24_11010 IPR018042 Aspartate kinase, conserved site RYU24_11010 IPR027795 CASTOR, ACT domain RYU24_11020 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RYU24_11020 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_11020 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RYU24_11020 IPR003156 DHHA1 domain RYU24_11020 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RYU24_11020 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily RYU24_11020 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain RYU24_11020 IPR002318 Alanine-tRNA ligase, class IIc RYU24_11020 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RYU24_11030 IPR036291 NAD(P)-binding domain superfamily RYU24_11030 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RYU24_11030 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RYU24_11030 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RYU24_11030 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RYU24_11030 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RYU24_11070 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain RYU24_11070 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RYU24_11070 IPR004517 ATP phosphoribosyltransferase regulatory subunit RYU24_11080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_11080 IPR001114 Adenylosuccinate synthetase RYU24_11080 IPR042111 Adenylosuccinate synthetase, domain 3 RYU24_11080 IPR042110 Adenylosuccinate synthetase, domain 2 RYU24_11080 IPR033128 Adenylosuccinate synthase, active site RYU24_11080 IPR018220 Adenylosuccinate synthase, GTP-binding site RYU24_11080 IPR042109 Adenylosuccinate synthetase, domain 1 RYU24_11090 IPR001915 Peptidase M48 RYU24_11120 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RYU24_11130 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_11130 IPR023753 FAD/NAD(P)-binding domain RYU24_11140 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily RYU24_11140 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RYU24_11140 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RYU24_11140 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RYU24_11140 IPR012338 Beta-lactamase/transpeptidase-like RYU24_11140 IPR015956 Penicillin-binding protein, C-terminal domain superfamily RYU24_11170 IPR014306 Hydroxyisourate hydrolase RYU24_11170 IPR023418 Transthyretin, thyroxine binding site RYU24_11170 IPR000895 Transthyretin/hydroxyisourate hydrolase RYU24_11170 IPR023416 Transthyretin/hydroxyisourate hydrolase domain RYU24_11170 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily RYU24_11170 IPR023419 Transthyretin, conserved site RYU24_11190 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_11190 IPR039420 Transcriptional regulatory protein WalR-like RYU24_11190 IPR001789 Signal transduction response regulator, receiver domain RYU24_11190 IPR001867 OmpR/PhoB-type DNA-binding domain RYU24_11190 IPR011006 CheY-like superfamily RYU24_11190 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response RYU24_11200 IPR006290 Heavy metal sensor kinase RYU24_11200 IPR003660 HAMP domain RYU24_11200 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_11200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_11200 IPR005467 Histidine kinase domain RYU24_11200 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_11200 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_11200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_11210 IPR003660 HAMP domain RYU24_11210 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_11210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_11210 IPR005467 Histidine kinase domain RYU24_11210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_11210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_11210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_11220 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain RYU24_11220 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_11220 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_11220 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RYU24_11220 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RYU24_11270 IPR002656 Acyltransferase 3 RYU24_11270 IPR036514 SGNH hydrolase superfamily RYU24_11300 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_11300 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_11300 IPR004839 Aminotransferase, class I/classII RYU24_11300 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_11310 IPR028427 Peptide methionine sulfoxide reductase RYU24_11310 IPR002579 Peptide methionine sulphoxide reductase MrsB RYU24_11310 IPR011057 Mss4-like superfamily RYU24_11320 IPR036249 Thioredoxin-like superfamily RYU24_11320 IPR029759 Glutathione peroxidase active site RYU24_11320 IPR029760 Glutathione peroxidase conserved site RYU24_11320 IPR000889 Glutathione peroxidase RYU24_11330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_11330 IPR004839 Aminotransferase, class I/classII RYU24_11330 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ RYU24_11330 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_11330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_11340 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme RYU24_11340 IPR002934 Polymerase, nucleotidyl transferase domain RYU24_11340 IPR006674 HD domain RYU24_11340 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RYU24_11340 IPR002912 ACT domain RYU24_11340 IPR003607 HD/PDEase domain RYU24_11350 IPR011761 ATP-grasp fold RYU24_11350 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RYU24_11350 IPR013815 ATP-grasp fold, subdomain 1 RYU24_11350 IPR016185 Pre-ATP-grasp domain superfamily RYU24_11350 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase RYU24_11350 IPR011054 Rudiment single hybrid motif RYU24_11370 IPR008407 Branched-chain amino acid transport, AzlD RYU24_11380 IPR011606 Branched-chain amino acid transport, permease RYU24_11410 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily RYU24_11410 IPR019831 Manganese/iron superoxide dismutase, N-terminal RYU24_11410 IPR019832 Manganese/iron superoxide dismutase, C-terminal RYU24_11410 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily RYU24_11410 IPR001189 Manganese/iron superoxide dismutase RYU24_11410 IPR019833 Manganese/iron superoxide dismutase, binding site RYU24_11420 IPR041706 YchF, N-terminal RYU24_11420 IPR013029 YchF, C-terminal domain RYU24_11420 IPR023192 TGS-like domain superfamily RYU24_11420 IPR012676 TGS-like RYU24_11420 IPR004095 TGS RYU24_11420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_11420 IPR006073 GTP binding domain RYU24_11420 IPR031167 OBG-type guanine nucleotide-binding (G) domain RYU24_11420 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RYU24_11420 IPR012675 Beta-grasp domain superfamily RYU24_11430 IPR035906 MetI-like superfamily RYU24_11430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_11440 IPR003439 ABC transporter-like RYU24_11440 IPR017871 ABC transporter, conserved site RYU24_11440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_11440 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain RYU24_11440 IPR018449 NIL domain RYU24_11440 IPR026253 Methionine import ATP-binding protein MetN RYU24_11440 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal RYU24_11440 IPR003593 AAA+ ATPase domain RYU24_11450 IPR004872 Lipoprotein NlpA family RYU24_11460 IPR036661 Luciferase-like domain superfamily RYU24_11460 IPR011251 Luciferase-like domain RYU24_11460 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A RYU24_11480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_11480 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_11480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_11480 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RYU24_11480 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_11530 IPR029072 YebC-like RYU24_11530 IPR026564 Transcriptional regulator TACO1-like, domain 3 RYU24_11530 IPR017856 Integrase-like, N-terminal RYU24_11530 IPR002876 Transcriptional regulator TACO1-like RYU24_11540 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RYU24_11540 IPR002123 Phospholipid/glycerol acyltransferase RYU24_11620 IPR011010 DNA breaking-rejoining enzyme, catalytic core RYU24_11620 IPR013762 Integrase-like, catalytic domain superfamily RYU24_11620 IPR038488 Integrase, DNA-binding domain superfamily RYU24_11620 IPR002104 Integrase, catalytic domain RYU24_11620 IPR025166 Integrase, DNA-binding domain RYU24_11620 IPR010998 Integrase/recombinase, N-terminal RYU24_11630 IPR022625 Type-1 restriction enzyme R protein, C-terminal RYU24_11630 IPR040980 SWI2/SNF2 ATPase RYU24_11630 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_11630 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal RYU24_11630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_11630 IPR004473 Restriction endonuclease, type I, HsdR RYU24_11640 IPR009057 Homeobox-like domain superfamily RYU24_11640 IPR038965 Transposase InsF-like RYU24_11660 IPR004841 Amino acid permease/ SLC12A domain RYU24_11660 IPR004840 Amino acid permease, conserved site RYU24_11660 IPR011265 GABA permease RYU24_11670 IPR036390 Winged helix DNA-binding domain superfamily RYU24_11670 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_11670 IPR000524 Transcription regulator HTH, GntR RYU24_11670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_11670 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_11670 IPR004839 Aminotransferase, class I/classII RYU24_11680 IPR004632 4-aminobutyrate aminotransferase, bacterial RYU24_11680 IPR005814 Aminotransferase class-III RYU24_11680 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_11680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_11680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_11690 IPR010102 Succinate semialdehyde dehydrogenase RYU24_11690 IPR015590 Aldehyde dehydrogenase domain RYU24_11690 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_11690 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_11690 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_11690 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_11690 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_11700 IPR025161 Putative transposase IS4/IS5 family RYU24_11730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_11730 IPR011704 ATPase, dynein-related, AAA domain RYU24_11730 IPR003593 AAA+ ATPase domain RYU24_11730 IPR021961 Protein of unknown function DUF3578 RYU24_11770 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_11770 IPR029052 Metallo-dependent phosphatase-like RYU24_11790 IPR036390 Winged helix DNA-binding domain superfamily RYU24_11790 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_11790 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RYU24_11790 IPR019888 Transcription regulator AsnC-type RYU24_11790 IPR000485 AsnC-type HTH domain RYU24_11790 IPR011991 ArsR-like helix-turn-helix domain RYU24_11790 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RYU24_11790 IPR011008 Dimeric alpha-beta barrel RYU24_11800 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RYU24_11800 IPR033524 Leu/Phe/Val dehydrogenases active site RYU24_11800 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RYU24_11800 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RYU24_11800 IPR014362 Glutamate dehydrogenase RYU24_11800 IPR033922 NAD(P) binding domain of glutamate dehydrogenase RYU24_11800 IPR036291 NAD(P)-binding domain superfamily RYU24_11810 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_11810 IPR026330 Succinylornithine transaminase RYU24_11810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_11810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_11810 IPR005814 Aminotransferase class-III RYU24_11810 IPR004636 Acetylornithine/Succinylornithine transaminase family RYU24_11810 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria RYU24_11820 IPR007041 Arginine N-succinyltransferase AstA/AruG RYU24_11820 IPR017650 Arginine N-succinyltransferase RYU24_11820 IPR016181 Acyl-CoA N-acyltransferase RYU24_11830 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_11830 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_11830 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_11830 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_11830 IPR015590 Aldehyde dehydrogenase domain RYU24_11830 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_11830 IPR017649 Succinylglutamate-semialdehyde dehydrogenase RYU24_11840 IPR037031 Succinylarginine dihydrolase superfamily RYU24_11840 IPR007079 Succinylarginine dihydrolase RYU24_11850 IPR016681 Succinylglutamate desuccinylase RYU24_11850 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RYU24_11860 IPR004841 Amino acid permease/ SLC12A domain RYU24_11860 IPR004840 Amino acid permease, conserved site RYU24_11870 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RYU24_11870 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RYU24_11870 IPR001608 Alanine racemase, N-terminal RYU24_11870 IPR011079 Alanine racemase, C-terminal RYU24_11870 IPR029066 PLP-binding barrel RYU24_11870 IPR000821 Alanine racemase RYU24_11880 IPR025948 HTH-like domain RYU24_11880 IPR001584 Integrase, catalytic core RYU24_11880 IPR012337 Ribonuclease H-like superfamily RYU24_11880 IPR036397 Ribonuclease H superfamily RYU24_11890 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_11890 IPR002514 Transposase IS3/IS911family RYU24_11890 IPR009057 Homeobox-like domain superfamily RYU24_11960 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RYU24_11960 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RYU24_11960 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RYU24_11960 IPR017638 Anthranilate 1,2-dioxygenase, large subunit RYU24_11960 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RYU24_11960 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RYU24_11970 IPR000477 Reverse transcriptase domain RYU24_11970 IPR024937 Domain X RYU24_11990 IPR013785 Aldolase-type TIM barrel RYU24_11990 IPR010722 Biotin and thiamin synthesis-associated domain RYU24_11990 IPR024177 Biotin synthase RYU24_11990 IPR007197 Radical SAM RYU24_11990 IPR006638 Elp3/MiaB/NifB RYU24_11990 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RYU24_12010 IPR009051 Alpha-helical ferredoxin RYU24_12010 IPR013542 Domain of unknown function DUF1730 RYU24_12010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RYU24_12010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_12010 IPR004453 Epoxyqueuosine reductase QueG RYU24_12020 IPR004443 YjeF N-terminal domain RYU24_12020 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase RYU24_12020 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr RYU24_12020 IPR029056 Ribokinase-like RYU24_12020 IPR036652 YjeF N-terminal domain superfamily RYU24_12030 IPR017968 Acylphosphatase, conserved site RYU24_12030 IPR020456 Acylphosphatase RYU24_12030 IPR001792 Acylphosphatase-like domain RYU24_12030 IPR036046 Acylphosphatase-like domain superfamily RYU24_12040 IPR036397 Ribonuclease H superfamily RYU24_12040 IPR012337 Ribonuclease H-like superfamily RYU24_12040 IPR002176 Crossover junction endodeoxyribonuclease RuvC RYU24_12040 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RYU24_12060 IPR001123 Amino acid exporter protein, LeuE-type RYU24_12060 IPR004778 Homoserine/Threonine efflux protein RYU24_12090 IPR001586 Beta-lactamase, class-C active site RYU24_12090 IPR001466 Beta-lactamase-related RYU24_12090 IPR012338 Beta-lactamase/transpeptidase-like RYU24_12100 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RYU24_12100 IPR036249 Thioredoxin-like superfamily RYU24_12100 IPR002109 Glutaredoxin RYU24_12100 IPR012081 Alkyl hydroperoxide reductase subunit F RYU24_12100 IPR023753 FAD/NAD(P)-binding domain RYU24_12100 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_12100 IPR012336 Thioredoxin-like fold RYU24_12120 IPR002935 Class I-like SAM-dependent O-methyltransferase RYU24_12120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_12140 IPR013766 Thioredoxin domain RYU24_12140 IPR036249 Thioredoxin-like superfamily RYU24_12140 IPR024706 Peroxiredoxin, AhpC-type RYU24_12140 IPR019479 Peroxiredoxin, C-terminal RYU24_12140 IPR017559 Alkyl hydroperoxide reductase subunit C RYU24_12140 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RYU24_12150 IPR024590 RNA helicase HrpA, C-terminal RYU24_12150 IPR003593 AAA+ ATPase domain RYU24_12150 IPR011545 DEAD/DEAH box helicase domain RYU24_12150 IPR001650 Helicase, C-terminal RYU24_12150 IPR007502 Helicase-associated domain RYU24_12150 IPR011709 Domain of unknown function DUF1605 RYU24_12150 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_12150 IPR010222 RNA helicase HrpA RYU24_12150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12160 IPR016039 Thiolase-like RYU24_12160 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RYU24_12160 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RYU24_12160 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RYU24_12190 IPR003593 AAA+ ATPase domain RYU24_12190 IPR010285 DNA helicase Pif1-like RYU24_12190 IPR029491 Helicase Helix-turn-helix domain RYU24_12190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12200 IPR007382 Uncharacterised protein family UPF0756, transmembrame RYU24_12210 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RYU24_12210 IPR002942 RNA-binding S4 domain RYU24_12210 IPR036986 RNA-binding S4 domain superfamily RYU24_12210 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain RYU24_12210 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_12210 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_12210 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RYU24_12240 IPR036986 RNA-binding S4 domain superfamily RYU24_12240 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_12240 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RYU24_12240 IPR006225 Pseudouridine synthase, RluC/RluD RYU24_12240 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_12240 IPR002942 RNA-binding S4 domain RYU24_12250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12250 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RYU24_12260 IPR014762 DNA mismatch repair, conserved site RYU24_12260 IPR020667 DNA mismatch repair protein, MutL RYU24_12260 IPR042121 MutL, C-terminal domain, regulatory subdomain RYU24_12260 IPR013507 DNA mismatch repair protein, S5 domain 2-like RYU24_12260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_12260 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms RYU24_12260 IPR014790 MutL, C-terminal, dimerisation RYU24_12260 IPR042120 MutL, C-terminal domain, dimerisation subdomain RYU24_12260 IPR037198 MutL, C-terminal domain superfamily RYU24_12260 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_12260 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_12260 IPR002099 DNA mismatch repair protein family, N-terminal RYU24_12270 IPR039657 Dimethylallyltransferase RYU24_12270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12270 IPR018022 IPP transferase RYU24_12280 IPR010920 LSM domain superfamily RYU24_12280 IPR005001 RNA-binding protein Hfq RYU24_12290 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RYU24_12290 IPR015391 SurA N-terminal RYU24_12290 IPR023034 Peptidyl-prolyl isomerase SurA RYU24_12290 IPR027304 Trigger factor/SurA domain superfamily RYU24_12300 IPR020889 LPS-assembly protein LptD RYU24_12300 IPR007543 LptD, C-terminal RYU24_12300 IPR005653 Organic solvent tolerance-like, N-terminal RYU24_12310 IPR011009 Protein kinase-like domain superfamily RYU24_12310 IPR002575 Aminoglycoside phosphotransferase RYU24_12320 IPR005835 Nucleotidyl transferase domain RYU24_12320 IPR029044 Nucleotide-diphospho-sugar transferases RYU24_12330 IPR003682 rRNA small subunit methyltransferase G RYU24_12330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12340 IPR025669 AAA domain RYU24_12350 IPR036086 ParB/Sulfiredoxin superfamily RYU24_12350 IPR003115 ParB/Sulfiredoxin RYU24_12350 IPR004437 ParB/RepB/Spo0J partition protein RYU24_12350 IPR041468 ParB/Spo0J, HTH domain RYU24_12360 IPR002898 MotA/TolQ/ExbB proton channel RYU24_12380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12380 IPR003593 AAA+ ATPase domain RYU24_12380 IPR011527 ABC transporter type 1, transmembrane domain RYU24_12380 IPR036640 ABC transporter type 1, transmembrane domain superfamily RYU24_12380 IPR003439 ABC transporter-like RYU24_12380 IPR017871 ABC transporter, conserved site RYU24_12380 IPR011917 ABC transporter, lipid A export, MsbA RYU24_12380 IPR039421 Type I protein exporter RYU24_12390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12390 IPR003758 Tetraacyldisaccharide 4'-kinase RYU24_12400 IPR029044 Nucleotide-diphospho-sugar transferases RYU24_12400 IPR003329 Acylneuraminate cytidylyltransferase RYU24_12400 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RYU24_12410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12410 IPR015199 DNA polymerase III, delta subunit, C-terminal RYU24_12410 IPR004622 DNA polymerase III, delta prime subunit RYU24_12430 IPR001130 TatD family RYU24_12430 IPR032466 Metal-dependent hydrolase RYU24_12430 IPR015991 Uncharacterised hydrolase TatD-type RYU24_12430 IPR018228 Deoxyribonuclease, TatD-related, conserved site RYU24_12440 IPR001647 DNA-binding HTH domain, TetR-type RYU24_12440 IPR009057 Homeobox-like domain superfamily RYU24_12450 IPR022346 General secretion pathway, GspH RYU24_12450 IPR002416 Type II secretion system protein H RYU24_12450 IPR012902 Prokaryotic N-terminal methylation site RYU24_12470 IPR012902 Prokaryotic N-terminal methylation site RYU24_12470 IPR010055 Type II secretion system protein J RYU24_12480 IPR005628 General secretion pathway protein K RYU24_12480 IPR038072 GspK, central domain superfamily RYU24_12500 IPR018085 Uracil-DNA glycosylase, active site RYU24_12500 IPR002043 Uracil-DNA glycosylase family 1 RYU24_12500 IPR036895 Uracil-DNA glycosylase-like domain superfamily RYU24_12500 IPR005122 Uracil-DNA glycosylase-like RYU24_12520 IPR016192 APOBEC/CMP deaminase, zinc-binding RYU24_12520 IPR002125 Cytidine and deoxycytidylate deaminase domain RYU24_12520 IPR016193 Cytidine deaminase-like RYU24_12520 IPR028883 tRNA-specific adenosine deaminase RYU24_12540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12540 IPR011994 Cytidylate kinase domain RYU24_12540 IPR003136 Cytidylate kinase RYU24_12550 IPR012340 Nucleic acid-binding, OB-fold RYU24_12550 IPR000110 Ribosomal protein S1 RYU24_12550 IPR022967 RNA-binding domain, S1 RYU24_12550 IPR003029 S1 domain RYU24_12560 IPR005685 Integration host factor, beta subunit RYU24_12560 IPR000119 Histone-like DNA-binding protein RYU24_12560 IPR020816 Histone-like DNA-binding protein, conserved site RYU24_12560 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RYU24_12580 IPR011060 Ribulose-phosphate binding barrel RYU24_12580 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RYU24_12580 IPR014732 Orotidine 5'-phosphate decarboxylase RYU24_12580 IPR013785 Aldolase-type TIM barrel RYU24_12580 IPR001754 Orotidine 5'-phosphate decarboxylase domain RYU24_12600 IPR005642 Lysine exporter LysO RYU24_12610 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_12610 IPR020946 Flavin monooxygenase-like RYU24_12620 IPR020946 Flavin monooxygenase-like RYU24_12620 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_12640 IPR005654 ATPase, AFG1-like RYU24_12640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12640 IPR030870 Cell division protein ZapE RYU24_12650 IPR001465 Malate synthase RYU24_12650 IPR011076 Malate synthase-like superfamily RYU24_12650 IPR006253 Malate synthase G RYU24_12650 IPR023310 Malate synthase G, beta sub-domain RYU24_12660 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_12660 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_12660 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_12660 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_12660 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_12660 IPR015590 Aldehyde dehydrogenase domain RYU24_12690 IPR000644 CBS domain RYU24_12690 IPR005170 Transporter-associated domain RYU24_12690 IPR005496 Integral membrane protein TerC RYU24_12690 IPR016169 FAD-binding, type PCMH, subdomain 2 RYU24_12690 IPR036318 FAD-binding, type PCMH-like superfamily RYU24_12700 IPR029056 Ribokinase-like RYU24_12700 IPR000417 Hydroxyethylthiazole kinase RYU24_12730 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold RYU24_12730 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily RYU24_12730 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RYU24_12730 IPR014782 Peptidase M1, membrane alanine aminopeptidase RYU24_12730 IPR012779 Peptidase M1, alanyl aminopeptidase RYU24_12730 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RYU24_12730 IPR042097 Aminopeptidase N-like , N-terminal RYU24_12730 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily RYU24_12730 IPR027268 Peptidase M4/M1, CTD superfamily RYU24_12750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_12750 IPR006015 Universal stress protein A family RYU24_12750 IPR006016 UspA RYU24_12760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_12760 IPR006015 Universal stress protein A family RYU24_12760 IPR006016 UspA RYU24_12770 IPR029058 Alpha/Beta hydrolase fold RYU24_12770 IPR002018 Carboxylesterase, type B RYU24_12770 IPR019826 Carboxylesterase type B, active site RYU24_12770 IPR019819 Carboxylesterase type B, conserved site RYU24_12780 IPR000390 Small multidrug resistance protein family RYU24_12790 IPR004711 Benzoate transporter RYU24_12800 IPR001123 Amino acid exporter protein, LeuE-type RYU24_12800 IPR004778 Homoserine/Threonine efflux protein RYU24_12810 IPR013785 Aldolase-type TIM barrel RYU24_12810 IPR001585 Transaldolase/Fructose-6-phosphate aldolase RYU24_12810 IPR004730 Transaldolase type 1 RYU24_12810 IPR018225 Transaldolase, active site RYU24_12820 IPR005119 LysR, substrate-binding RYU24_12820 IPR036390 Winged helix DNA-binding domain superfamily RYU24_12820 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_12820 IPR000847 Transcription regulator HTH, LysR RYU24_12840 IPR020616 Thiolase, N-terminal RYU24_12840 IPR002155 Thiolase RYU24_12840 IPR016039 Thiolase-like RYU24_12840 IPR020610 Thiolase, active site RYU24_12840 IPR012806 Acetyl-CoA C-acyltransferase FadI RYU24_12840 IPR020617 Thiolase, C-terminal RYU24_12840 IPR020613 Thiolase, conserved site RYU24_12850 IPR036291 NAD(P)-binding domain superfamily RYU24_12850 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_12850 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_12850 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RYU24_12890 IPR003593 AAA+ ATPase domain RYU24_12890 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily RYU24_12890 IPR021029 DNA polymerase III, tau subunit, domain V RYU24_12890 IPR012763 DNA polymerase III, subunit gamma/ tau RYU24_12890 IPR022754 DNA polymerase III, gamma subunit, domain III RYU24_12890 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV RYU24_12890 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_12890 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RYU24_12890 IPR001270 ClpA/B family RYU24_12900 IPR029069 HotDog domain superfamily RYU24_12900 IPR006683 Thioesterase domain RYU24_12910 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA RYU24_12910 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RYU24_12910 IPR039697 Iron-type alcohol dehydrogenase-like RYU24_12920 IPR023485 Phosphotyrosine protein phosphatase I RYU24_12920 IPR036196 Phosphotyrosine protein phosphatase I superfamily RYU24_12920 IPR017867 Protein-tyrosine phosphatase, low molecular weight RYU24_12930 IPR006094 FAD linked oxidase, N-terminal RYU24_12930 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily RYU24_12930 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RYU24_12930 IPR016169 FAD-binding, type PCMH, subdomain 2 RYU24_12930 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RYU24_12930 IPR036318 FAD-binding, type PCMH-like superfamily RYU24_12930 IPR016166 FAD-binding domain, PCMH-type RYU24_12930 IPR016167 FAD-binding, type PCMH, subdomain 1 RYU24_12960 IPR013785 Aldolase-type TIM barrel RYU24_12960 IPR024188 Glutamate synthase large subunit-like protein RYU24_12960 IPR002932 Glutamate synthase domain RYU24_12960 IPR027283 Glutamate synthase large subunit-like protein, bacteria RYU24_12980 IPR025841 Circularly permuted ATP-grasp type 2 RYU24_12980 IPR016450 Uncharacterised conserved protein UCP005522 RYU24_13000 IPR013589 Bacterial transglutaminase-like, N-terminal RYU24_13000 IPR038765 Papain-like cysteine peptidase superfamily RYU24_13000 IPR002931 Transglutaminase-like RYU24_13030 IPR001608 Alanine racemase, N-terminal RYU24_13030 IPR029066 PLP-binding barrel RYU24_13030 IPR011079 Alanine racemase, C-terminal RYU24_13030 IPR000821 Alanine racemase RYU24_13030 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RYU24_13040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_13040 IPR007693 DNA helicase, DnaB-like, N-terminal RYU24_13040 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RYU24_13040 IPR007694 DNA helicase, DnaB-like, C-terminal RYU24_13040 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily RYU24_13040 IPR003593 AAA+ ATPase domain RYU24_13040 IPR007692 DNA helicase, DnaB type RYU24_13050 IPR036935 Ribosomal protein L9, N-terminal domain superfamily RYU24_13050 IPR036791 Ribosomal protein L9, C-terminal domain superfamily RYU24_13050 IPR020069 Ribosomal protein L9, C-terminal RYU24_13050 IPR020070 Ribosomal protein L9, N-terminal RYU24_13050 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RYU24_13050 IPR000244 Ribosomal protein L9 RYU24_13050 IPR020594 Ribosomal protein L9, bacteria/chloroplast RYU24_13060 IPR001648 Ribosomal protein S18 RYU24_13060 IPR018275 Ribosomal protein S18, conserved site RYU24_13060 IPR036870 Ribosomal protein S18 superfamily RYU24_13070 IPR020814 Ribosomal protein S6, plastid/chloroplast RYU24_13070 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RYU24_13070 IPR000529 Ribosomal protein S6 RYU24_13070 IPR020815 Ribosomal protein S6, conserved site RYU24_13070 IPR035980 Ribosomal protein S6 superfamily RYU24_13080 IPR030470 UbiA prenyltransferase conserved site RYU24_13080 IPR000537 UbiA prenyltransferase family RYU24_13080 IPR006369 Protohaem IX farnesyltransferase RYU24_13090 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RYU24_13090 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RYU24_13100 IPR024791 Cytochrome c oxidase subunit III RYU24_13100 IPR033946 Ubiquinol oxidase subunit III domain RYU24_13100 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RYU24_13100 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RYU24_13100 IPR035973 Cytochrome c oxidase subunit III-like superfamily RYU24_13100 IPR000298 Cytochrome c oxidase subunit III-like RYU24_13110 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RYU24_13110 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RYU24_13110 IPR000883 Cytochrome c oxidase subunit I RYU24_13110 IPR023616 Cytochrome c oxidase-like, subunit I domain RYU24_13110 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RYU24_13120 IPR002429 Cytochrome c oxidase subunit II-like C-terminal RYU24_13120 IPR010514 COX aromatic rich motif RYU24_13120 IPR006333 Cytochrome o ubiquinol oxidase subunit II RYU24_13120 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily RYU24_13120 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RYU24_13120 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain RYU24_13120 IPR008972 Cupredoxin RYU24_13140 IPR040442 Pyruvate kinase-like domain superfamily RYU24_13140 IPR006319 Phosphoenolpyruvate synthase RYU24_13140 IPR018274 PEP-utilising enzyme, active site RYU24_13140 IPR000121 PEP-utilising enzyme, C-terminal RYU24_13140 IPR023151 PEP-utilising enzyme, conserved site RYU24_13140 IPR036637 Phosphohistidine domain superfamily RYU24_13140 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RYU24_13140 IPR013815 ATP-grasp fold, subdomain 1 RYU24_13140 IPR008279 PEP-utilising enzyme, mobile domain RYU24_13140 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_13150 IPR005177 Bifunctional kinase-pyrophosphorylase RYU24_13150 IPR026530 Phosphoenolpyruvate synthase regulatory protein RYU24_13160 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_13160 IPR020946 Flavin monooxygenase-like RYU24_13170 IPR011251 Luciferase-like domain RYU24_13170 IPR036661 Luciferase-like domain superfamily RYU24_13170 IPR019949 Luciferase family oxidoreductase, group 1 RYU24_13200 IPR005139 Peptide chain release factor RYU24_13200 IPR000352 Peptide chain release factor class I RYU24_13200 IPR004373 Peptide chain release factor 1 RYU24_13210 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RYU24_13210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_13210 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RYU24_13210 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_13210 IPR004556 Methyltransferase HemK-like RYU24_13210 IPR025714 Methyltransferase domain RYU24_13220 IPR035906 MetI-like superfamily RYU24_13220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_13230 IPR015168 SsuA/THI5-like RYU24_13230 IPR027939 NMT1/THI5 family RYU24_13260 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_13260 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_13260 IPR036291 NAD(P)-binding domain superfamily RYU24_13270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_13270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_13270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_13270 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_13270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_13270 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_13270 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_13280 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_13280 IPR020845 AMP-binding, conserved site RYU24_13280 IPR000873 AMP-dependent synthetase/ligase RYU24_13280 IPR042099 AMP-dependent synthetase-like superfamily RYU24_13310 IPR012730 Molybdopterin synthase sulfurylase MoeB RYU24_13310 IPR000594 THIF-type NAD/FAD binding fold RYU24_13310 IPR035985 Ubiquitin-activating enzyme RYU24_13320 IPR011009 Protein kinase-like domain superfamily RYU24_13320 IPR000719 Protein kinase domain RYU24_13320 IPR004147 UbiB domain RYU24_13330 IPR006157 Dihydroneopterin aldolase/epimerase domain RYU24_13330 IPR006156 Dihydroneopterin aldolase RYU24_13360 IPR009078 Ferritin-like superfamily RYU24_13360 IPR011566 Ubiquinone biosynthesis protein Coq7 RYU24_13370 IPR023727 Lysophospholipid transporter LplT RYU24_13370 IPR011701 Major facilitator superfamily RYU24_13370 IPR036259 MFS transporter superfamily RYU24_13380 IPR034746 POTRA domain RYU24_13380 IPR000184 Bacterial surface antigen (D15) RYU24_13380 IPR010827 POTRA domain, BamA/TamA-like RYU24_13380 IPR039910 Surface antigen D15-like RYU24_13380 IPR035243 TamA, POTRA domain 1 RYU24_13520 IPR001525 C-5 cytosine methyltransferase RYU24_13520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_13520 IPR018117 DNA methylase, C-5 cytosine-specific, active site RYU24_13540 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_13540 IPR036390 Winged helix DNA-binding domain superfamily RYU24_13540 IPR015927 Peptidase S24/S26A/S26B/S26C RYU24_13540 IPR006197 Peptidase S24, LexA-like RYU24_13540 IPR006199 LexA repressor, DNA-binding domain RYU24_13540 IPR036286 LexA/Signal peptidase-like superfamily RYU24_13540 IPR006200 Transcription regulator LexA RYU24_13540 IPR039418 LexA-like RYU24_13540 IPR011991 ArsR-like helix-turn-helix domain RYU24_13580 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RYU24_13580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_13580 IPR003593 AAA+ ATPase domain RYU24_13580 IPR001270 ClpA/B family RYU24_13580 IPR002611 IstB-like ATP-binding protein RYU24_14020 IPR025824 OB-fold nucleic acid binding domain RYU24_14020 IPR003753 Exonuclease VII, large subunit RYU24_14020 IPR020579 Exonuclease VII, large subunit, C-terminal RYU24_14060 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RYU24_14060 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RYU24_14060 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RYU24_14060 IPR036008 Aconitase, iron-sulfur domain RYU24_14060 IPR015932 Aconitase, domain 2 RYU24_14060 IPR015929 Aconitase B, swivel RYU24_14060 IPR036288 Aconitase B, HEAT-like domain superfamily RYU24_14060 IPR018136 Aconitase family, 4Fe-4S cluster binding site RYU24_14060 IPR004406 Aconitase B RYU24_14060 IPR015933 Aconitase B, HEAT-like domain RYU24_14090 IPR004445 Sodium/glutamate symport carrier protein GltS RYU24_14130 IPR004685 Branched-chain amino acid transport system II carrier protein RYU24_14140 IPR000994 Peptidase M24 RYU24_14140 IPR001714 Peptidase M24, methionine aminopeptidase RYU24_14140 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RYU24_14140 IPR036005 Creatinase/aminopeptidase-like RYU24_14150 IPR005119 LysR, substrate-binding RYU24_14150 IPR000847 Transcription regulator HTH, LysR RYU24_14150 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_14150 IPR036390 Winged helix DNA-binding domain superfamily RYU24_14160 IPR027546 Sirtuin, class III RYU24_14160 IPR026591 Sirtuin, catalytic core small domain superfamily RYU24_14160 IPR026590 Sirtuin family, catalytic core domain RYU24_14160 IPR029035 DHS-like NAD/FAD-binding domain superfamily RYU24_14160 IPR003000 Sirtuin family RYU24_14190 IPR013785 Aldolase-type TIM barrel RYU24_14190 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_14190 IPR023753 FAD/NAD(P)-binding domain RYU24_14190 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RYU24_14230 IPR033828 CTP synthase GATase domain RYU24_14230 IPR029062 Class I glutamine amidotransferase-like RYU24_14230 IPR004468 CTP synthase RYU24_14230 IPR017456 CTP synthase, N-terminal RYU24_14230 IPR017926 Glutamine amidotransferase RYU24_14230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_14240 IPR013785 Aldolase-type TIM barrel RYU24_14240 IPR006218 DAHP synthetase I/KDSA RYU24_14240 IPR006269 3-deoxy-8-phosphooctulonate synthase RYU24_14250 IPR029017 Enolase-like, N-terminal RYU24_14250 IPR036849 Enolase-like, C-terminal domain superfamily RYU24_14250 IPR000941 Enolase RYU24_14250 IPR020809 Enolase, conserved site RYU24_14250 IPR020811 Enolase, N-terminal RYU24_14250 IPR020810 Enolase, C-terminal TIM barrel domain RYU24_14260 IPR007060 Septum formation initiator FtsL/DivIC RYU24_14260 IPR023081 Cell division protein FtsB RYU24_14270 IPR029044 Nucleotide-diphospho-sugar transferases RYU24_14270 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RYU24_14270 IPR034683 Cytidylyltransferase IspD/TarI RYU24_14270 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RYU24_14280 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB RYU24_14280 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RYU24_14280 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RYU24_14310 IPR003317 Cytochrome ubiquinol oxidase subunit 2 RYU24_14320 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RYU24_14340 IPR033900 Porin domain, Gram-negative type RYU24_14340 IPR013793 Porin, Gram-negative type, conserved site RYU24_14340 IPR001702 Porin, Gram-negative type RYU24_14340 IPR023614 Porin domain superfamily RYU24_14340 IPR002299 Porin, Neisseria sp. type RYU24_14350 IPR036265 HIT-like superfamily RYU24_14350 IPR019808 Histidine triad, conserved site RYU24_14350 IPR001310 Histidine triad (HIT) protein RYU24_14350 IPR039384 HINT family RYU24_14350 IPR011146 HIT-like domain RYU24_14370 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RYU24_14370 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_14370 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RYU24_14370 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RYU24_14370 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RYU24_14370 IPR036291 NAD(P)-binding domain superfamily RYU24_14370 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RYU24_14390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_14390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_14390 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_14390 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RYU24_14390 IPR006234 O-succinylhomoserine sulfhydrylase RYU24_14400 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily RYU24_14400 IPR004401 Nucleoid-associated protein YbaB/EbfC family RYU24_14410 IPR034137 RecR, TOPRIM domain RYU24_14410 IPR015967 Recombination protein RecR, conserved site RYU24_14410 IPR006171 TOPRIM domain RYU24_14410 IPR023627 Recombination protein RecR RYU24_14410 IPR000093 DNA recombination protein RecR RYU24_14410 IPR023628 Recombination protein RecR, C4-type zinc finger RYU24_14420 IPR002562 3'-5' exonuclease domain RYU24_14420 IPR010997 HRDC-like superfamily RYU24_14420 IPR002121 HRDC domain RYU24_14420 IPR006292 Ribonuclease D RYU24_14420 IPR012337 Ribonuclease H-like superfamily RYU24_14420 IPR036397 Ribonuclease H superfamily RYU24_14430 IPR038068 YcgL-like superfamily RYU24_14430 IPR027354 YcgL domain RYU24_14450 IPR000642 Peptidase M41 RYU24_14450 IPR037219 Peptidase M41-like RYU24_14450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_14450 IPR003959 ATPase, AAA-type, core RYU24_14450 IPR041569 AAA ATPase, AAA+ lid domain RYU24_14450 IPR005936 Peptidase, FtsH RYU24_14450 IPR003593 AAA+ ATPase domain RYU24_14470 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RYU24_14470 IPR023026 Tryptophan synthase beta chain/beta chain-like RYU24_14470 IPR006654 Tryptophan synthase, beta chain RYU24_14470 IPR006653 Tryptophan synthase, beta chain, conserved site RYU24_14470 IPR001926 Pyridoxal-phosphate dependent enzyme RYU24_14480 IPR013785 Aldolase-type TIM barrel RYU24_14480 IPR001093 IMP dehydrogenase/GMP reductase RYU24_14480 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RYU24_14480 IPR005990 Inosine-5'-monophosphate dehydrogenase RYU24_14480 IPR000644 CBS domain RYU24_14540 IPR001431 Peptidase M16, zinc-binding site RYU24_14540 IPR011765 Peptidase M16, N-terminal RYU24_14540 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RYU24_14540 IPR007863 Peptidase M16, C-terminal RYU24_14550 IPR036225 SRP/SRP receptor, N-terminal RYU24_14550 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RYU24_14550 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RYU24_14550 IPR013822 Signal recognition particle SRP54, helical bundle RYU24_14550 IPR004390 Signal-recognition particle receptor FtsY RYU24_14550 IPR003593 AAA+ ATPase domain RYU24_14550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_14580 IPR018635 Uncharacterised protein family UPF0319 RYU24_14600 IPR000182 GNAT domain RYU24_14600 IPR016181 Acyl-CoA N-acyltransferase RYU24_14610 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_14610 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_14610 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_14610 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_14610 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_14610 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_14610 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_14620 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_14620 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_14620 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_14620 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_14620 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_14620 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_14620 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_14630 IPR011009 Protein kinase-like domain superfamily RYU24_14630 IPR004147 UbiB domain RYU24_14660 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RYU24_14660 IPR007848 Methyltransferase small domain RYU24_14660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_14660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_14660 IPR004556 Methyltransferase HemK-like RYU24_14670 IPR035904 Chorismate synthase AroC superfamily RYU24_14670 IPR020541 Chorismate synthase, conserved site RYU24_14670 IPR000453 Chorismate synthase RYU24_14720 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_14720 IPR006076 FAD dependent oxidoreductase RYU24_14720 IPR023080 D-amino acid dehydrogenase DadA RYU24_14740 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily RYU24_14740 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RYU24_14740 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RYU24_14760 IPR013785 Aldolase-type TIM barrel RYU24_14760 IPR006219 DHAP synthase, class 1 RYU24_14760 IPR006218 DAHP synthetase I/KDSA RYU24_14770 IPR002781 Transmembrane protein TauE-like RYU24_14780 IPR003835 Glycosyl transferase, family 19 RYU24_14790 IPR032783 AraC-type transcription regulator, ligand-binding domain RYU24_14790 IPR018060 DNA binding HTH domain, AraC-type RYU24_14790 IPR018062 HTH domain AraC-type, conserved site RYU24_14790 IPR014710 RmlC-like jelly roll fold RYU24_14790 IPR009057 Homeobox-like domain superfamily RYU24_14790 IPR020449 Transcription regulator HTH, AraC- type RYU24_14790 IPR011051 RmlC-like cupin domain superfamily RYU24_14800 IPR005804 Fatty acid desaturase domain RYU24_14800 IPR033885 Alkane/xylene monooxygenase RYU24_14810 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_14810 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_14810 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_14810 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_14810 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_14810 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_14810 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RYU24_14820 IPR023609 Transcription regulator HTH, RhaS RYU24_14820 IPR020449 Transcription regulator HTH, AraC- type RYU24_14820 IPR014710 RmlC-like jelly roll fold RYU24_14820 IPR018060 DNA binding HTH domain, AraC-type RYU24_14820 IPR037923 Transcription regulator HTH-like RYU24_14820 IPR009057 Homeobox-like domain superfamily RYU24_14820 IPR003313 AraC-type arabinose-binding/dimerisation domain RYU24_14840 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RYU24_14840 IPR001387 Cro/C1-type helix-turn-helix domain RYU24_14870 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RYU24_14880 IPR003317 Cytochrome ubiquinol oxidase subunit 2 RYU24_14890 IPR035437 SNase-like, OB-fold superfamily RYU24_14890 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RYU24_14890 IPR002071 Thermonuclease active site RYU24_14910 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_14910 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_14910 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_14910 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_14910 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_14910 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_14910 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_14940 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_14940 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_14940 IPR036291 NAD(P)-binding domain superfamily RYU24_15000 IPR030871 Cardiolipin synthase C RYU24_15000 IPR025202 Phospholipase D-like domain RYU24_15000 IPR001736 Phospholipase D/Transphosphatidylase RYU24_15010 IPR011032 GroES-like superfamily RYU24_15010 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RYU24_15010 IPR013154 Alcohol dehydrogenase, N-terminal RYU24_15010 IPR014183 Alcohol dehydrogenase class III RYU24_15010 IPR013149 Alcohol dehydrogenase, C-terminal RYU24_15010 IPR036291 NAD(P)-binding domain superfamily RYU24_15010 IPR020843 Polyketide synthase, enoylreductase domain RYU24_15030 IPR013785 Aldolase-type TIM barrel RYU24_15030 IPR006219 DHAP synthase, class 1 RYU24_15030 IPR006218 DAHP synthetase I/KDSA RYU24_15040 IPR001482 Type II/IV secretion system protein RYU24_15040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_15040 IPR006321 Pilus retraction protein PilT RYU24_15050 IPR001482 Type II/IV secretion system protein RYU24_15050 IPR006321 Pilus retraction protein PilT RYU24_15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_15060 IPR020846 Major facilitator superfamily domain RYU24_15060 IPR036259 MFS transporter superfamily RYU24_15060 IPR011701 Major facilitator superfamily RYU24_15070 IPR033753 Glycine cleavage system H-protein/Simiate RYU24_15070 IPR017453 Glycine cleavage system H-protein, subgroup RYU24_15070 IPR011053 Single hybrid motif RYU24_15070 IPR000089 Biotin/lipoyl attachment RYU24_15070 IPR002930 Glycine cleavage system H-protein RYU24_15080 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RYU24_15080 IPR009057 Homeobox-like domain superfamily RYU24_15080 IPR018060 DNA binding HTH domain, AraC-type RYU24_15080 IPR020449 Transcription regulator HTH, AraC- type RYU24_15090 IPR003593 AAA+ ATPase domain RYU24_15090 IPR011527 ABC transporter type 1, transmembrane domain RYU24_15090 IPR036640 ABC transporter type 1, transmembrane domain superfamily RYU24_15090 IPR003439 ABC transporter-like RYU24_15090 IPR017871 ABC transporter, conserved site RYU24_15090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_15090 IPR039421 Type I protein exporter RYU24_15100 IPR006685 Mechanosensitive ion channel MscS RYU24_15100 IPR010920 LSM domain superfamily RYU24_15100 IPR030192 Miniconductance mechanosensitive channel YbdG RYU24_15100 IPR011066 Mechanosensitive ion channel MscS, C-terminal RYU24_15120 IPR018636 Protein of unknown function DUF2058 RYU24_15140 IPR001991 Sodium:dicarboxylate symporter RYU24_15140 IPR036458 Sodium:dicarboxylate symporter superfamily RYU24_15140 IPR023025 Serine/threonine transporter SstT RYU24_15150 IPR001902 SLC26A/SulP transporter RYU24_15150 IPR011547 SLC26A/SulP transporter domain RYU24_15150 IPR002645 STAS domain RYU24_15150 IPR036513 STAS domain superfamily RYU24_15160 IPR011991 ArsR-like helix-turn-helix domain RYU24_15160 IPR001845 HTH ArsR-type DNA-binding domain RYU24_15160 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_15160 IPR036390 Winged helix DNA-binding domain superfamily RYU24_15170 IPR005856 Cysteine synthase RYU24_15170 IPR005859 Cysteine synthase CysK RYU24_15170 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RYU24_15170 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RYU24_15170 IPR001926 Pyridoxal-phosphate dependent enzyme RYU24_15180 IPR027256 P-type ATPase, subfamily IB RYU24_15180 IPR001757 P-type ATPase RYU24_15180 IPR036163 Heavy metal-associated domain superfamily RYU24_15180 IPR006121 Heavy metal-associated domain, HMA RYU24_15180 IPR006122 Heavy metal-associated domain, copper ion-binding RYU24_15180 IPR017969 Heavy-metal-associated, conserved site RYU24_15180 IPR023214 HAD superfamily RYU24_15180 IPR008250 P-type ATPase, A domain superfamily RYU24_15180 IPR036412 HAD-like superfamily RYU24_15180 IPR018303 P-type ATPase, phosphorylation site RYU24_15180 IPR023299 P-type ATPase, cytoplasmic domain N RYU24_15180 IPR023298 P-type ATPase, transmembrane domain superfamily RYU24_15190 IPR000551 MerR-type HTH domain RYU24_15190 IPR011789 Cu(I)-responsive transcriptional regulator RYU24_15190 IPR009061 Putative DNA-binding domain superfamily RYU24_15190 IPR015358 Transcription regulator MerR, DNA binding RYU24_15210 IPR009057 Homeobox-like domain superfamily RYU24_15210 IPR001647 DNA-binding HTH domain, TetR-type RYU24_15210 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RYU24_15210 IPR013571 Transcription regulator QacR, C-terminal RYU24_15210 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RYU24_15220 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_15220 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_15220 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RYU24_15220 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_15220 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_15220 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_15220 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_15230 IPR002155 Thiolase RYU24_15230 IPR016039 Thiolase-like RYU24_15230 IPR020615 Thiolase, acyl-enzyme intermediate active site RYU24_15230 IPR020610 Thiolase, active site RYU24_15230 IPR020613 Thiolase, conserved site RYU24_15230 IPR020616 Thiolase, N-terminal RYU24_15230 IPR020617 Thiolase, C-terminal RYU24_15240 IPR027805 Transposase, Helix-turn-helix domain RYU24_15240 IPR027806 Harbinger transposase-derived nuclease domain RYU24_15250 IPR027806 Harbinger transposase-derived nuclease domain RYU24_15250 IPR027805 Transposase, Helix-turn-helix domain RYU24_15260 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase RYU24_15260 IPR011201 Zinc-ribbon domain, bacteria RYU24_15290 IPR029058 Alpha/Beta hydrolase fold RYU24_15290 IPR000073 Alpha/beta hydrolase fold-1 RYU24_15290 IPR022742 Serine aminopeptidase, S33 RYU24_15290 IPR026968 3-oxoadipate enol-lactonase 1/2 RYU24_15300 IPR020616 Thiolase, N-terminal RYU24_15300 IPR020613 Thiolase, conserved site RYU24_15300 IPR020617 Thiolase, C-terminal RYU24_15300 IPR020610 Thiolase, active site RYU24_15300 IPR016039 Thiolase-like RYU24_15300 IPR002155 Thiolase RYU24_15300 IPR012793 Beta-ketoadipyl CoA thiolase RYU24_15300 IPR020615 Thiolase, acyl-enzyme intermediate active site RYU24_15310 IPR012791 3-oxoacid CoA-transferase, subunit B RYU24_15310 IPR004165 Coenzyme A transferase family I RYU24_15310 IPR004164 Coenzyme A transferase active site RYU24_15310 IPR037171 NagB/RpiA transferase-like RYU24_15320 IPR004163 Coenzyme A transferase binding site RYU24_15320 IPR012792 3-oxoacid CoA-transferase, subunit A RYU24_15320 IPR037171 NagB/RpiA transferase-like RYU24_15320 IPR004165 Coenzyme A transferase family I RYU24_15330 IPR004711 Benzoate transporter RYU24_15340 IPR036291 NAD(P)-binding domain superfamily RYU24_15340 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_15340 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_15350 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_15350 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RYU24_15350 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RYU24_15350 IPR036010 2Fe-2S ferredoxin-like superfamily RYU24_15350 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RYU24_15350 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_15350 IPR017938 Riboflavin synthase-like beta-barrel RYU24_15350 IPR012675 Beta-grasp domain superfamily RYU24_15350 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_15350 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RYU24_15360 IPR017641 Benzoate 1,2-dioxygenase, small subunit RYU24_15360 IPR032710 NTF2-like domain superfamily RYU24_15360 IPR000391 Ring-hydroxylating dioxygenase beta subunit RYU24_15370 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RYU24_15370 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RYU24_15370 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RYU24_15370 IPR017639 Benzoate 1,2-dioxygenase, large subunit RYU24_15370 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RYU24_15370 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RYU24_15380 IPR015889 Intradiol ring-cleavage dioxygenase, core RYU24_15380 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RYU24_15380 IPR007535 Catechol dioxygenase, N-terminal RYU24_15380 IPR012801 Catechol 1,2-dioxygenase, proteobacteria RYU24_15390 IPR003464 Muconolactone delta-isomerase RYU24_15390 IPR026029 Muconolactone isomerase domain RYU24_15390 IPR011008 Dimeric alpha-beta barrel RYU24_15400 IPR013370 Muconate/chloromuconate cycloisomerase RYU24_15400 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RYU24_15400 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RYU24_15400 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RYU24_15400 IPR036849 Enolase-like, C-terminal domain superfamily RYU24_15400 IPR029065 Enolase C-terminal domain-like RYU24_15400 IPR029017 Enolase-like, N-terminal RYU24_15410 IPR036390 Winged helix DNA-binding domain superfamily RYU24_15410 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_15410 IPR000847 Transcription regulator HTH, LysR RYU24_15410 IPR005119 LysR, substrate-binding RYU24_15420 IPR005829 Sugar transporter, conserved site RYU24_15420 IPR036259 MFS transporter superfamily RYU24_15420 IPR020846 Major facilitator superfamily domain RYU24_15420 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RYU24_15420 IPR011701 Major facilitator superfamily RYU24_15440 IPR036390 Winged helix DNA-binding domain superfamily RYU24_15440 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_15440 IPR000524 Transcription regulator HTH, GntR RYU24_15440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_15440 IPR004839 Aminotransferase, class I/classII RYU24_15440 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_15440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_15460 IPR042099 AMP-dependent synthetase-like superfamily RYU24_15460 IPR000873 AMP-dependent synthetase/ligase RYU24_15460 IPR020845 AMP-binding, conserved site RYU24_15460 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_15470 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RYU24_15470 IPR012675 Beta-grasp domain superfamily RYU24_15470 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_15470 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RYU24_15470 IPR036010 2Fe-2S ferredoxin-like superfamily RYU24_15470 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_15470 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RYU24_15470 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_15470 IPR017938 Riboflavin synthase-like beta-barrel RYU24_15480 IPR005804 Fatty acid desaturase domain RYU24_15500 IPR036412 HAD-like superfamily RYU24_15500 IPR006439 HAD hydrolase, subfamily IA RYU24_15500 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_15500 IPR023214 HAD superfamily RYU24_15500 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RYU24_15530 IPR011761 ATP-grasp fold RYU24_15530 IPR011054 Rudiment single hybrid motif RYU24_15530 IPR016185 Pre-ATP-grasp domain superfamily RYU24_15530 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RYU24_15530 IPR005482 Biotin carboxylase, C-terminal RYU24_15530 IPR011764 Biotin carboxylation domain RYU24_15530 IPR005481 Biotin carboxylase-like, N-terminal domain RYU24_15580 IPR008722 Outer membrane porin F, N-terminal RYU24_15580 IPR036737 OmpA-like domain superfamily RYU24_15580 IPR006690 Outer membrane protein, OmpA-like, conserved site RYU24_15580 IPR006665 OmpA-like domain RYU24_15580 IPR006664 Outer membrane protein, bacterial RYU24_15580 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel RYU24_15590 IPR010985 Ribbon-helix-helix RYU24_15590 IPR014864 Transcription factor, NikR, nickel binding C-terminal RYU24_15590 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal RYU24_15590 IPR022988 Nickel-responsive transcriptional regulator NikR RYU24_15590 IPR013321 Arc-type ribbon-helix-helix RYU24_15590 IPR002145 Ribbon-helix-helix protein, CopG RYU24_15600 IPR014085 Allophanate hydrolase RYU24_15600 IPR023631 Amidase signature domain RYU24_15600 IPR036928 Amidase signature (AS) superfamily RYU24_15610 IPR001320 Ionotropic glutamate receptor RYU24_15610 IPR018313 Solute-binding protein family 3, conserved site RYU24_15610 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RYU24_15620 IPR000390 Small multidrug resistance protein family RYU24_15650 IPR003593 AAA+ ATPase domain RYU24_15650 IPR003439 ABC transporter-like RYU24_15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_15660 IPR035906 MetI-like superfamily RYU24_15660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_15670 IPR036412 HAD-like superfamily RYU24_15670 IPR006439 HAD hydrolase, subfamily IA RYU24_15670 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_15670 IPR023214 HAD superfamily RYU24_15670 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RYU24_15680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_15680 IPR017871 ABC transporter, conserved site RYU24_15680 IPR005890 Nitrate transport ATP-binding subunit C/D RYU24_15680 IPR003439 ABC transporter-like RYU24_15680 IPR003593 AAA+ ATPase domain RYU24_15710 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RYU24_15710 IPR010917 TonB-dependent receptor, conserved site RYU24_15710 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_15710 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_15710 IPR039426 Vitamin B12 transporter BtuB-like RYU24_15710 IPR012910 TonB-dependent receptor, plug domain RYU24_15710 IPR010916 TonB box, conserved site RYU24_15730 IPR018093 BCCT transporter, conserved site RYU24_15730 IPR000060 BCCT transporter family RYU24_15740 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RYU24_15740 IPR009057 Homeobox-like domain superfamily RYU24_15740 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RYU24_15740 IPR017757 Transcriptional repressor BetI RYU24_15740 IPR039538 BetI-type transcriptional repressor, C-terminal RYU24_15740 IPR001647 DNA-binding HTH domain, TetR-type RYU24_15750 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_15750 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_15750 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_15750 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_15750 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_15750 IPR015590 Aldehyde dehydrogenase domain RYU24_15750 IPR011264 Betaine aldehyde dehydrogenase RYU24_15760 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RYU24_15760 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RYU24_15760 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_15760 IPR011533 Oxygen-dependent choline dehydrogenase RYU24_15760 IPR012132 Glucose-methanol-choline oxidoreductase RYU24_15760 IPR027424 Glucose Oxidase, domain 2 RYU24_15780 IPR041080 YcaO cyclodehydratase, C-terminal RYU24_15780 IPR003776 YcaO-like domain RYU24_15790 IPR029016 GAF-like domain superfamily RYU24_15790 IPR005471 Transcription regulator IclR, N-terminal RYU24_15790 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_15790 IPR036390 Winged helix DNA-binding domain superfamily RYU24_15790 IPR014757 Transcription regulator IclR, C-terminal RYU24_15800 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_15800 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_15800 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_15800 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_15800 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_15800 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_15800 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_15810 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_15810 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_15810 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_15810 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_15810 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_15810 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_15810 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_15820 IPR005829 Sugar transporter, conserved site RYU24_15820 IPR036259 MFS transporter superfamily RYU24_15820 IPR020846 Major facilitator superfamily domain RYU24_15820 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RYU24_15820 IPR011701 Major facilitator superfamily RYU24_15830 IPR004163 Coenzyme A transferase binding site RYU24_15830 IPR037171 NagB/RpiA transferase-like RYU24_15830 IPR004165 Coenzyme A transferase family I RYU24_15830 IPR012792 3-oxoacid CoA-transferase, subunit A RYU24_15840 IPR004165 Coenzyme A transferase family I RYU24_15840 IPR037171 NagB/RpiA transferase-like RYU24_15840 IPR012791 3-oxoacid CoA-transferase, subunit B RYU24_15840 IPR004164 Coenzyme A transferase active site RYU24_15860 IPR011701 Major facilitator superfamily RYU24_15860 IPR020846 Major facilitator superfamily domain RYU24_15860 IPR036259 MFS transporter superfamily RYU24_15880 IPR011701 Major facilitator superfamily RYU24_15880 IPR005829 Sugar transporter, conserved site RYU24_15880 IPR036259 MFS transporter superfamily RYU24_15880 IPR020846 Major facilitator superfamily domain RYU24_15880 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RYU24_15890 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RYU24_15890 IPR029045 ClpP/crotonase-like domain superfamily RYU24_15890 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_15890 IPR014748 Enoyl-CoA hydratase, C-terminal RYU24_15900 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_15900 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RYU24_15900 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RYU24_15900 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC RYU24_15900 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RYU24_15900 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RYU24_15900 IPR036291 NAD(P)-binding domain superfamily RYU24_15910 IPR020617 Thiolase, C-terminal RYU24_15910 IPR020616 Thiolase, N-terminal RYU24_15910 IPR020610 Thiolase, active site RYU24_15910 IPR020613 Thiolase, conserved site RYU24_15910 IPR002155 Thiolase RYU24_15910 IPR016039 Thiolase-like RYU24_15910 IPR020615 Thiolase, acyl-enzyme intermediate active site RYU24_15910 IPR012793 Beta-ketoadipyl CoA thiolase RYU24_15930 IPR001303 Class II aldolase/adducin N-terminal RYU24_15930 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RYU24_15940 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RYU24_15940 IPR036291 NAD(P)-binding domain superfamily RYU24_15940 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RYU24_15940 IPR023514 Glyoxylate/hydroxypyruvate reductase A RYU24_15950 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RYU24_15950 IPR014748 Enoyl-CoA hydratase, C-terminal RYU24_15950 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_15950 IPR029045 ClpP/crotonase-like domain superfamily RYU24_15960 IPR004136 Nitronate monooxygenase RYU24_15960 IPR013785 Aldolase-type TIM barrel RYU24_15970 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_15970 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RYU24_15970 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_15970 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_15970 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_15970 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_15970 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_15980 IPR029058 Alpha/Beta hydrolase fold RYU24_15980 IPR000073 Alpha/beta hydrolase fold-1 RYU24_15980 IPR019913 Pyrimidine utilisation protein RutD RYU24_15990 IPR020946 Flavin monooxygenase-like RYU24_15990 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_16000 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_16000 IPR000873 AMP-dependent synthetase/ligase RYU24_16000 IPR020845 AMP-binding, conserved site RYU24_16000 IPR042099 AMP-dependent synthetase-like superfamily RYU24_16010 IPR003673 CoA-transferase family III RYU24_16010 IPR023606 CoA-transferase family III domain superfamily RYU24_16020 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RYU24_16020 IPR020846 Major facilitator superfamily domain RYU24_16020 IPR036259 MFS transporter superfamily RYU24_16020 IPR011701 Major facilitator superfamily RYU24_16020 IPR005829 Sugar transporter, conserved site RYU24_16040 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RYU24_16040 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_16040 IPR036291 NAD(P)-binding domain superfamily RYU24_16040 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_16050 IPR014748 Enoyl-CoA hydratase, C-terminal RYU24_16050 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RYU24_16050 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB RYU24_16050 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_16050 IPR029045 ClpP/crotonase-like domain superfamily RYU24_16060 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_16060 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_16060 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_16060 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_16060 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_16060 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_16060 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_16070 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_16070 IPR020845 AMP-binding, conserved site RYU24_16070 IPR000873 AMP-dependent synthetase/ligase RYU24_16070 IPR042099 AMP-dependent synthetase-like superfamily RYU24_16100 IPR036291 NAD(P)-binding domain superfamily RYU24_16100 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_16100 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_16110 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG RYU24_16110 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RYU24_16120 IPR003838 ABC transporter permease protein domain RYU24_16120 IPR025857 MacB-like periplasmic core domain RYU24_16120 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E RYU24_16130 IPR003593 AAA+ ATPase domain RYU24_16130 IPR003439 ABC transporter-like RYU24_16130 IPR017871 ABC transporter, conserved site RYU24_16130 IPR015854 ABC transporter, lipoprotein release, LolD RYU24_16130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_16140 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_16140 IPR001845 HTH ArsR-type DNA-binding domain RYU24_16140 IPR011991 ArsR-like helix-turn-helix domain RYU24_16140 IPR036390 Winged helix DNA-binding domain superfamily RYU24_16150 IPR007272 Sulphur transport domain RYU24_16170 IPR001279 Metallo-beta-lactamase RYU24_16170 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_16190 IPR011706 Multicopper oxidase, type 2 RYU24_16190 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RYU24_16190 IPR006311 Twin-arginine translocation pathway, signal sequence RYU24_16190 IPR001117 Multicopper oxidase, type 1 RYU24_16190 IPR034282 Copper resistance protein CopA, second cupredoxin domain RYU24_16190 IPR002355 Multicopper oxidase, copper-binding site RYU24_16190 IPR033138 Multicopper oxidases, conserved site RYU24_16190 IPR006376 Copper-resistance protein CopA RYU24_16190 IPR034284 Copper resistance protein, first cupredoxin domain RYU24_16190 IPR011707 Multicopper oxidase, type 3 RYU24_16190 IPR008972 Cupredoxin RYU24_16190 IPR034279 Copper resistance protein, third cupredoxin domain RYU24_16200 IPR007939 Copper resistance B precursor RYU24_16240 IPR010917 TonB-dependent receptor, conserved site RYU24_16240 IPR010105 TonB-dependent siderophore receptor RYU24_16240 IPR010916 TonB box, conserved site RYU24_16240 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_16240 IPR039423 TonB-dependent receptor-like RYU24_16240 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_16240 IPR012910 TonB-dependent receptor, plug domain RYU24_16240 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RYU24_16250 IPR003712 Cyanate lyase, C-terminal RYU24_16250 IPR036581 Cyanate lyase, C-terminal domain superfamily RYU24_16250 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RYU24_16250 IPR008076 Cyanate hydratase RYU24_16260 IPR000292 Formate/nitrite transporter RYU24_16260 IPR023999 Formate transporter FocA, putative RYU24_16260 IPR023271 Aquaporin-like RYU24_16260 IPR024002 Formate/nitrite transporter, conserved site RYU24_16270 IPR017441 Protein kinase, ATP binding site RYU24_16270 IPR000719 Protein kinase domain RYU24_16270 IPR011009 Protein kinase-like domain superfamily RYU24_16270 IPR008271 Serine/threonine-protein kinase, active site RYU24_16280 IPR011042 Six-bladed beta-propeller, TolB-like RYU24_16280 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RYU24_16280 IPR012938 Glucose/Sorbosone dehydrogenase RYU24_16290 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase RYU24_16290 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_16290 IPR029052 Metallo-dependent phosphatase-like RYU24_16310 IPR006276 Cobalamin-independent methionine synthase RYU24_16310 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RYU24_16310 IPR038071 UROD/MetE-like superfamily RYU24_16310 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal RYU24_16320 IPR002563 Flavin reductase like domain RYU24_16320 IPR019917 FMN reductase (NADH) RutF RYU24_16320 IPR012349 FMN-binding split barrel RYU24_16360 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_16360 IPR036390 Winged helix DNA-binding domain superfamily RYU24_16360 IPR005119 LysR, substrate-binding RYU24_16360 IPR000847 Transcription regulator HTH, LysR RYU24_16380 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein RYU24_16400 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA RYU24_16400 IPR039562 Membrane fusion protein, biotin-lipoyl like domain RYU24_16400 IPR006143 RND efflux pump, membrane fusion protein RYU24_16430 IPR039426 Vitamin B12 transporter BtuB-like RYU24_16430 IPR012910 TonB-dependent receptor, plug domain RYU24_16430 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_16430 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_16430 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RYU24_16430 IPR010105 TonB-dependent siderophore receptor RYU24_16440 IPR017511 PQQ-dependent membrane bound dehydrogenase RYU24_16440 IPR002372 Pyrrolo-quinoline quinone repeat RYU24_16440 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RYU24_16440 IPR001479 Quinoprotein dehydrogenase, conserved site RYU24_16440 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RYU24_16450 IPR007049 Carbohydrate-selective porin OprB RYU24_16450 IPR038673 Carbohydrate-selective porin OprB superfamily RYU24_16470 IPR006680 Amidohydrolase-related RYU24_16470 IPR023512 Deaminase MtaD/DadD RYU24_16470 IPR011059 Metal-dependent hydrolase, composite domain superfamily RYU24_16470 IPR032466 Metal-dependent hydrolase RYU24_16480 IPR001851 ABC transporter, permease RYU24_16500 IPR003593 AAA+ ATPase domain RYU24_16500 IPR003439 ABC transporter-like RYU24_16500 IPR017871 ABC transporter, conserved site RYU24_16500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_16510 IPR003760 ABC transporter substrate-binding protein PnrA-like RYU24_16530 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RYU24_16530 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RYU24_16530 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RYU24_16540 IPR005119 LysR, substrate-binding RYU24_16540 IPR036390 Winged helix DNA-binding domain superfamily RYU24_16540 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_16540 IPR000847 Transcription regulator HTH, LysR RYU24_16550 IPR011059 Metal-dependent hydrolase, composite domain superfamily RYU24_16550 IPR006680 Amidohydrolase-related RYU24_16550 IPR032466 Metal-dependent hydrolase RYU24_16560 IPR006680 Amidohydrolase-related RYU24_16560 IPR011059 Metal-dependent hydrolase, composite domain superfamily RYU24_16560 IPR032466 Metal-dependent hydrolase RYU24_16570 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_16570 IPR002938 FAD-binding domain RYU24_16580 IPR005164 Allantoicase RYU24_16580 IPR008979 Galactose-binding-like domain superfamily RYU24_16580 IPR015908 Allantoicase domain RYU24_16590 IPR023525 Ureidoglycolate lyase, bacterial RYU24_16590 IPR011051 RmlC-like cupin domain superfamily RYU24_16590 IPR007247 Ureidoglycolate lyase RYU24_16590 IPR024060 Ureidoglycolate lyase domain superfamily RYU24_16610 IPR006042 Xanthine/uracil permease RYU24_16610 IPR017588 Uric acid permease UacT-like RYU24_16610 IPR006043 Xanthine/uracil/vitamin C permease RYU24_16620 IPR014306 Hydroxyisourate hydrolase RYU24_16620 IPR023418 Transthyretin, thyroxine binding site RYU24_16620 IPR023416 Transthyretin/hydroxyisourate hydrolase domain RYU24_16620 IPR023419 Transthyretin, conserved site RYU24_16620 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily RYU24_16660 IPR032466 Metal-dependent hydrolase RYU24_16660 IPR005848 Urease, alpha subunit RYU24_16660 IPR017951 Urease alpha subunit, C-terminal RYU24_16660 IPR029754 Urease nickel binding site RYU24_16660 IPR011059 Metal-dependent hydrolase, composite domain superfamily RYU24_16660 IPR011612 Urease alpha-subunit, N-terminal domain RYU24_16660 IPR017950 Urease active site RYU24_16660 IPR006680 Amidohydrolase-related RYU24_16670 IPR002019 Urease, beta subunit RYU24_16670 IPR036461 Urease, beta subunit superfamily RYU24_16680 IPR002026 Urease, gamma/gamma-beta subunit RYU24_16680 IPR036463 Urease, gamma subunit superfamily RYU24_16680 IPR012010 Urease, gamma subunit RYU24_16690 IPR002669 Urease accessory protein UreD RYU24_16710 IPR004400 Urease accessory protein UreG RYU24_16710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_16710 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RYU24_16720 IPR002639 Urease accessory protein UreF RYU24_16720 IPR038277 UreF domain superfamily RYU24_16730 IPR036675 UreE, C-terminal domain superfamily RYU24_16730 IPR036118 UreE urease accessory, N-terminal domain superfamily RYU24_16730 IPR004029 UreE urease accessory, N-terminal RYU24_16730 IPR007864 Urease accessory protein UreE, C-terminal domain RYU24_16730 IPR012406 Urease accessory protein UreE RYU24_16750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_16750 IPR003593 AAA+ ATPase domain RYU24_16750 IPR003439 ABC transporter-like RYU24_16750 IPR017871 ABC transporter, conserved site RYU24_16750 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RYU24_16760 IPR003593 AAA+ ATPase domain RYU24_16760 IPR003439 ABC transporter-like RYU24_16760 IPR017871 ABC transporter, conserved site RYU24_16760 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RYU24_16760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_16780 IPR001851 ABC transporter, permease RYU24_16790 IPR000709 Leu/Ile/Val-binding protein RYU24_16790 IPR039570 AmiC, periplasmic binding domain RYU24_16790 IPR028082 Periplasmic binding protein-like I RYU24_16800 IPR029058 Alpha/Beta hydrolase fold RYU24_16800 IPR000073 Alpha/beta hydrolase fold-1 RYU24_16870 IPR005677 Fumarate hydratase, class II RYU24_16870 IPR024083 Fumarase/histidase, N-terminal RYU24_16870 IPR018951 Fumarase C, C-terminal RYU24_16870 IPR020557 Fumarate lyase, conserved site RYU24_16870 IPR000362 Fumarate lyase family RYU24_16870 IPR022761 Fumarate lyase, N-terminal RYU24_16870 IPR008948 L-Aspartase-like RYU24_16880 IPR036291 NAD(P)-binding domain superfamily RYU24_16880 IPR016040 NAD(P)-binding domain RYU24_16880 IPR005886 UDP-glucose 4-epimerase RYU24_16890 IPR003787 Sulphur relay, DsrE/F-like protein RYU24_16890 IPR027396 DsrEFH-like RYU24_16890 IPR017463 Sulphur relay, TusD/DsrE RYU24_16950 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RYU24_16950 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RYU24_16950 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RYU24_16960 IPR001874 Dehydroquinase, class II RYU24_16960 IPR018509 Dehydroquinase, class II, conserved site RYU24_16960 IPR036441 Dehydroquinase, class II superfamily RYU24_16970 IPR001249 Acetyl-CoA biotin carboxyl carrier RYU24_16970 IPR001882 Biotin-binding site RYU24_16970 IPR000089 Biotin/lipoyl attachment RYU24_16970 IPR011053 Single hybrid motif RYU24_16980 IPR016185 Pre-ATP-grasp domain superfamily RYU24_16980 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RYU24_16980 IPR005482 Biotin carboxylase, C-terminal RYU24_16980 IPR011054 Rudiment single hybrid motif RYU24_16980 IPR005481 Biotin carboxylase-like, N-terminal domain RYU24_16980 IPR013815 ATP-grasp fold, subdomain 1 RYU24_16980 IPR011761 ATP-grasp fold RYU24_16980 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RYU24_16980 IPR011764 Biotin carboxylation domain RYU24_17000 IPR033416 Periplasmic sensor domain CHASE7 RYU24_17000 IPR000160 GGDEF domain RYU24_17000 IPR029787 Nucleotide cyclase RYU24_17010 IPR023631 Amidase signature domain RYU24_17010 IPR036928 Amidase signature (AS) superfamily RYU24_17010 IPR000120 Amidase RYU24_17010 IPR020556 Amidase, conserved site RYU24_17020 IPR024989 Major facilitator superfamily associated domain RYU24_17020 IPR036259 MFS transporter superfamily RYU24_17020 IPR026032 Probable 3-phenylpropionic acid transporter RYU24_17030 IPR011701 Major facilitator superfamily RYU24_17030 IPR020846 Major facilitator superfamily domain RYU24_17030 IPR036259 MFS transporter superfamily RYU24_17030 IPR023692 Multidrug resistance protein MdtG RYU24_17030 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RYU24_17050 IPR027805 Transposase, Helix-turn-helix domain RYU24_17050 IPR027806 Harbinger transposase-derived nuclease domain RYU24_17080 IPR036397 Ribonuclease H superfamily RYU24_17080 IPR012337 Ribonuclease H-like superfamily RYU24_17080 IPR001584 Integrase, catalytic core RYU24_17080 IPR025948 HTH-like domain RYU24_17110 IPR039418 LexA-like RYU24_17110 IPR036286 LexA/Signal peptidase-like superfamily RYU24_17110 IPR006197 Peptidase S24, LexA-like RYU24_17110 IPR015927 Peptidase S24/S26A/S26B/S26C RYU24_17120 IPR024728 DNA polymerase type-Y, HhH motif RYU24_17120 IPR001126 UmuC domain RYU24_17120 IPR025188 Domain of unknown function DUF4113 RYU24_17120 IPR017961 DNA polymerase, Y-family, little finger domain RYU24_17120 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RYU24_17140 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RYU24_17140 IPR001387 Cro/C1-type helix-turn-helix domain RYU24_17140 IPR039060 Antitoxin HigA RYU24_17150 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative RYU24_17180 IPR001208 MCM domain RYU24_17180 IPR004482 Mg chelatase-related protein RYU24_17180 IPR025158 Mg chelatase-related protein, C-terminal domain RYU24_17180 IPR000523 Magnesium chelatase ChlI domain RYU24_17180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_17180 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_17180 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_17180 IPR003593 AAA+ ATPase domain RYU24_17190 IPR027805 Transposase, Helix-turn-helix domain RYU24_17190 IPR027806 Harbinger transposase-derived nuclease domain RYU24_17200 IPR027806 Harbinger transposase-derived nuclease domain RYU24_17200 IPR027805 Transposase, Helix-turn-helix domain RYU24_17230 IPR027805 Transposase, Helix-turn-helix domain RYU24_17230 IPR027806 Harbinger transposase-derived nuclease domain RYU24_17250 IPR001453 MoaB/Mog domain RYU24_17250 IPR008135 Competence-induced protein CinA RYU24_17250 IPR036425 MoaB/Mog-like domain superfamily RYU24_17250 IPR008136 CinA, C-terminal RYU24_17250 IPR036653 CinA-like, C-terminal RYU24_17250 IPR041424 CinA, KH domain RYU24_17270 IPR019810 Citrate synthase active site RYU24_17270 IPR024176 Citrate synthase, bacterial-type RYU24_17270 IPR016142 Citrate synthase-like, large alpha subdomain RYU24_17270 IPR036969 Citrate synthase superfamily RYU24_17270 IPR002020 Citrate synthase RYU24_17270 IPR011278 2-methylcitrate synthase/citrate synthase type I RYU24_17270 IPR016143 Citrate synthase-like, small alpha subdomain RYU24_17280 IPR039556 ICL/PEPM domain RYU24_17280 IPR012695 2-methylisocitrate lyase RYU24_17280 IPR040442 Pyruvate kinase-like domain superfamily RYU24_17280 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RYU24_17280 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_17290 IPR009057 Homeobox-like domain superfamily RYU24_17290 IPR001647 DNA-binding HTH domain, TetR-type RYU24_17290 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RYU24_17300 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RYU24_17300 IPR002292 Ornithine/putrescine carbamoyltransferase RYU24_17300 IPR024904 Ornithine carbamoyltransferase RYU24_17300 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RYU24_17300 IPR006130 Aspartate/ornithine carbamoyltransferase RYU24_17300 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RYU24_17320 IPR003844 Uncharacterised protein family UPF0060 RYU24_17330 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_17330 IPR041546 ClpA/ClpB, AAA lid domain RYU24_17330 IPR003959 ATPase, AAA-type, core RYU24_17330 IPR018368 ClpA/B, conserved site 1 RYU24_17330 IPR003593 AAA+ ATPase domain RYU24_17330 IPR019489 Clp ATPase, C-terminal RYU24_17330 IPR001270 ClpA/B family RYU24_17330 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA RYU24_17330 IPR004176 Clp, N-terminal RYU24_17330 IPR036628 Clp, N-terminal domain superfamily RYU24_17330 IPR028299 ClpA/B, conserved site 2 RYU24_17340 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RYU24_17340 IPR003769 Adaptor protein ClpS, core RYU24_17340 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RYU24_17360 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RYU24_17360 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RYU24_17360 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RYU24_17360 IPR036291 NAD(P)-binding domain superfamily RYU24_17360 IPR000534 Semialdehyde dehydrogenase, NAD-binding RYU24_17380 IPR004788 Ribose 5-phosphate isomerase, type A RYU24_17380 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RYU24_17380 IPR037171 NagB/RpiA transferase-like RYU24_17390 IPR001926 Pyridoxal-phosphate dependent enzyme RYU24_17390 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RYU24_17390 IPR001721 Threonine dehydratase, ACT-like domain RYU24_17390 IPR038110 Threonine dehydratase, ACT-like domain superfamily RYU24_17390 IPR005787 Threonine dehydratase, biosynthetic RYU24_17390 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RYU24_17400 IPR003148 Regulator of K+ conductance, N-terminal RYU24_17400 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RYU24_17400 IPR006037 Regulator of K+ conductance, C-terminal RYU24_17400 IPR036291 NAD(P)-binding domain superfamily RYU24_17410 IPR003445 Cation transporter RYU24_17410 IPR004772 TrkH potassium transport family RYU24_17420 IPR003187 Phospholipase A1 RYU24_17420 IPR036541 Phospholipase A1 superfamily RYU24_17430 IPR007863 Peptidase M16, C-terminal RYU24_17430 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RYU24_17430 IPR011765 Peptidase M16, N-terminal RYU24_17430 IPR013578 Peptidase M16C associated RYU24_17450 IPR029056 Ribokinase-like RYU24_17450 IPR011611 Carbohydrate kinase PfkB RYU24_17450 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RYU24_17470 IPR010840 Protein of unknown function DUF1449 RYU24_17520 IPR027304 Trigger factor/SurA domain superfamily RYU24_17520 IPR037041 Trigger factor, C-terminal domain superfamily RYU24_17520 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RYU24_17520 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RYU24_17520 IPR008880 Trigger factor, C-terminal RYU24_17520 IPR023059 Foldase protein PrsA RYU24_17530 IPR000119 Histone-like DNA-binding protein RYU24_17530 IPR020816 Histone-like DNA-binding protein, conserved site RYU24_17530 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RYU24_17560 IPR036390 Winged helix DNA-binding domain superfamily RYU24_17560 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_17560 IPR000944 Transcription regulator Rrf2-type RYU24_17560 IPR030489 Transcription regulator Rrf2-type, conserved site RYU24_17560 IPR010242 Transcription factor HTH, IscR RYU24_17570 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RYU24_17570 IPR010240 Cysteine desulfurase IscS RYU24_17570 IPR016454 Cysteine desulfurase RYU24_17570 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_17570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_17570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_17570 IPR000192 Aminotransferase class V domain RYU24_17580 IPR011339 ISC system FeS cluster assembly, IscU scaffold RYU24_17580 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RYU24_17590 IPR000361 FeS cluster biogenesis RYU24_17590 IPR011302 Iron-binding protein IscA, proteobacteria RYU24_17590 IPR035903 HesB-like domain superfamily RYU24_17590 IPR016092 FeS cluster insertion protein RYU24_17590 IPR017870 FeS cluster insertion, C-terminal, conserved site RYU24_17600 IPR036869 Chaperone J-domain superfamily RYU24_17600 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RYU24_17600 IPR036386 HscB, C-terminal domain superfamily RYU24_17600 IPR004640 Co-chaperone Hsc20 RYU24_17600 IPR001623 DnaJ domain RYU24_17610 IPR018181 Heat shock protein 70, conserved site RYU24_17610 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RYU24_17610 IPR013126 Heat shock protein 70 family RYU24_17610 IPR010236 ISC system FeS cluster assembly, HscA chaperone RYU24_17610 IPR042039 HscA chaperone, nucleotide-binding domain RYU24_17610 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RYU24_17620 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria RYU24_17620 IPR012675 Beta-grasp domain superfamily RYU24_17620 IPR018298 Adrenodoxin, iron-sulphur binding site RYU24_17620 IPR001055 Adrenodoxin RYU24_17620 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RYU24_17620 IPR036010 2Fe-2S ferredoxin-like superfamily RYU24_17630 IPR029787 Nucleotide cyclase RYU24_17630 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RYU24_17650 IPR041471 UvrB, interaction domain RYU24_17650 IPR036101 CarD-like/TRCF domain superfamily RYU24_17650 IPR003711 CarD-like/TRCF domain RYU24_17650 IPR011545 DEAD/DEAH box helicase domain RYU24_17650 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_17650 IPR001650 Helicase, C-terminal RYU24_17650 IPR004576 Transcription-repair coupling factor RYU24_17650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_17650 IPR037235 TRCF-like, C-terminal domain RYU24_17650 IPR005118 Transcription-repair-coupling factor, C-terminal domain RYU24_17670 IPR022761 Fumarate lyase, N-terminal RYU24_17670 IPR004708 Aspartate ammonia-lyase RYU24_17670 IPR024083 Fumarase/histidase, N-terminal RYU24_17670 IPR000362 Fumarate lyase family RYU24_17670 IPR018951 Fumarase C, C-terminal RYU24_17670 IPR008948 L-Aspartase-like RYU24_17670 IPR020557 Fumarate lyase, conserved site RYU24_17680 IPR018212 Sodium/solute symporter, conserved site RYU24_17680 IPR038377 Sodium/glucose symporter superfamily RYU24_17680 IPR001734 Sodium/solute symporter RYU24_17680 IPR011851 Sodium/proline symporter RYU24_17690 IPR011851 Sodium/proline symporter RYU24_17690 IPR038377 Sodium/glucose symporter superfamily RYU24_17690 IPR018212 Sodium/solute symporter, conserved site RYU24_17690 IPR001734 Sodium/solute symporter RYU24_17700 IPR019888 Transcription regulator AsnC-type RYU24_17700 IPR011991 ArsR-like helix-turn-helix domain RYU24_17700 IPR000485 AsnC-type HTH domain RYU24_17700 IPR011008 Dimeric alpha-beta barrel RYU24_17700 IPR036390 Winged helix DNA-binding domain superfamily RYU24_17700 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_17700 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RYU24_17700 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RYU24_17710 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_17710 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_17710 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_17710 IPR010985 Ribbon-helix-helix RYU24_17710 IPR002872 Proline dehydrogenase domain RYU24_17710 IPR024082 Proline dehydrogenase PutA, domain II RYU24_17710 IPR024089 Proline dehydrogenase PutA, domain I/II RYU24_17710 IPR024090 Proline dehydrogenase PutA, domain I RYU24_17710 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_17710 IPR029041 FAD-linked oxidoreductase-like RYU24_17710 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 RYU24_17710 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain RYU24_17710 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_17710 IPR025703 Bifunctional protein PutA RYU24_17710 IPR013321 Arc-type ribbon-helix-helix RYU24_17710 IPR015590 Aldehyde dehydrogenase domain RYU24_17720 IPR010280 (Uracil-5)-methyltransferase family RYU24_17720 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA RYU24_17720 IPR030391 RNA methyltransferase TrmA, conserved site RYU24_17720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_17720 IPR030390 RNA methyltransferase TrmA, active site RYU24_17750 IPR009057 Homeobox-like domain superfamily RYU24_17750 IPR001584 Integrase, catalytic core RYU24_17750 IPR012337 Ribonuclease H-like superfamily RYU24_17750 IPR036397 Ribonuclease H superfamily RYU24_17750 IPR001598 Transposase, IS30, conserved site RYU24_17760 IPR021134 Bestrophin/UPF0187 RYU24_17770 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily RYU24_17770 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal RYU24_17770 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily RYU24_17770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_17770 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RYU24_17770 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain RYU24_17770 IPR022861 Glutamine-tRNA ligase, bacterial RYU24_17770 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RYU24_17770 IPR004514 Glutamine-tRNA synthetase RYU24_17770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_17780 IPR029000 Cyclophilin-like domain superfamily RYU24_17780 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RYU24_17780 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RYU24_17780 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RYU24_17790 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_17790 IPR029052 Metallo-dependent phosphatase-like RYU24_17790 IPR010138 UDP-2,3-diacylglucosamine hydrolase RYU24_17810 IPR012337 Ribonuclease H-like superfamily RYU24_17810 IPR001584 Integrase, catalytic core RYU24_17810 IPR025948 HTH-like domain RYU24_17810 IPR036397 Ribonuclease H superfamily RYU24_17830 IPR040442 Pyruvate kinase-like domain superfamily RYU24_17830 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase RYU24_17830 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales RYU24_17830 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_17830 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RYU24_17840 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RYU24_17840 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales RYU24_17840 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase RYU24_17840 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_17840 IPR040442 Pyruvate kinase-like domain superfamily RYU24_17850 IPR033878 Nitroreductase NfsB-like RYU24_17850 IPR029479 Nitroreductase RYU24_17850 IPR000415 Nitroreductase-like RYU24_17880 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype RYU24_17880 IPR000771 Fructose-bisphosphate aldolase, class-II RYU24_17880 IPR013785 Aldolase-type TIM barrel RYU24_17900 IPR001576 Phosphoglycerate kinase RYU24_17900 IPR015911 Phosphoglycerate kinase, conserved site RYU24_17900 IPR015824 Phosphoglycerate kinase, N-terminal RYU24_17900 IPR036043 Phosphoglycerate kinase superfamily RYU24_17920 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein RYU24_17920 IPR029001 Inosine triphosphate pyrophosphatase-like RYU24_17930 IPR039994 JmjC domain-containing RYU24_17930 IPR003347 JmjC domain RYU24_17940 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_17940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_17940 IPR005467 Histidine kinase domain RYU24_17940 IPR017202 Sensor histidine kinase LiaS/VraS RYU24_17940 IPR003660 HAMP domain RYU24_17940 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RYU24_17950 IPR011006 CheY-like superfamily RYU24_17950 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_17950 IPR001789 Signal transduction response regulator, receiver domain RYU24_17950 IPR000792 Transcription regulator LuxR, C-terminal RYU24_17970 IPR010203 Regulator of ribonuclease activity A RYU24_17970 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily RYU24_17970 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RYU24_17980 IPR016040 NAD(P)-binding domain RYU24_17980 IPR036291 NAD(P)-binding domain superfamily RYU24_17980 IPR000534 Semialdehyde dehydrogenase, NAD-binding RYU24_17990 IPR002583 Ribosomal protein S20 RYU24_17990 IPR036510 Ribosomal protein S20 superfamily RYU24_18010 IPR000760 Inositol monophosphatase-like RYU24_18010 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ RYU24_18010 IPR020583 Inositol monophosphatase, metal-binding site RYU24_18010 IPR020550 Inositol monophosphatase, conserved site RYU24_18020 IPR023214 HAD superfamily RYU24_18020 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_18020 IPR036412 HAD-like superfamily RYU24_18020 IPR006439 HAD hydrolase, subfamily IA RYU24_18030 IPR036986 RNA-binding S4 domain superfamily RYU24_18030 IPR025708 Heat shock protein 15 RYU24_18030 IPR002942 RNA-binding S4 domain RYU24_18040 IPR020584 DNA recombination/repair protein RecA, conserved site RYU24_18040 IPR013765 DNA recombination and repair protein RecA RYU24_18040 IPR023400 DNA recombination and repair protein RecA, C-terminal RYU24_18040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18040 IPR003593 AAA+ ATPase domain RYU24_18040 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RYU24_18040 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface RYU24_18050 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_18050 IPR003783 Regulatory protein RecX RYU24_18080 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal RYU24_18080 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily RYU24_18080 IPR001451 Hexapeptide repeat RYU24_18080 IPR018357 Hexapeptide transferase, conserved site RYU24_18080 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RYU24_18080 IPR011004 Trimeric LpxA-like superfamily RYU24_18090 IPR029069 HotDog domain superfamily RYU24_18090 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RYU24_18090 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RYU24_18100 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RYU24_18100 IPR011004 Trimeric LpxA-like superfamily RYU24_18100 IPR001451 Hexapeptide repeat RYU24_18100 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD RYU24_18120 IPR034746 POTRA domain RYU24_18120 IPR000184 Bacterial surface antigen (D15) RYU24_18120 IPR010827 POTRA domain, BamA/TamA-like RYU24_18120 IPR039910 Surface antigen D15-like RYU24_18120 IPR023707 Outer membrane protein assembly factor BamA RYU24_18130 IPR041489 PDZ domain 6 RYU24_18130 IPR008915 Peptidase M50 RYU24_18130 IPR001478 PDZ domain RYU24_18130 IPR036034 PDZ superfamily RYU24_18130 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RYU24_18140 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RYU24_18140 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RYU24_18140 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RYU24_18140 IPR026877 DXP reductoisomerase C-terminal domain RYU24_18140 IPR036169 DXP reductoisomerase, C-terminal domain superfamily RYU24_18140 IPR036291 NAD(P)-binding domain superfamily RYU24_18150 IPR000374 Phosphatidate cytidylyltransferase RYU24_18160 IPR036424 Decaprenyl diphosphate synthase-like superfamily RYU24_18160 IPR001441 Decaprenyl diphosphate synthase-like RYU24_18160 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RYU24_18170 IPR002661 Ribosome recycling factor RYU24_18170 IPR023584 Ribosome recycling factor domain RYU24_18170 IPR036191 RRF superfamily RYU24_18180 IPR015963 Uridylate kinase, bacteria RYU24_18180 IPR011817 Uridylate kinase RYU24_18180 IPR001048 Aspartate/glutamate/uridylate kinase RYU24_18180 IPR036393 Acetylglutamate kinase-like superfamily RYU24_18190 IPR041582 RimO, TRAM domain RYU24_18190 IPR023404 Radical SAM, alpha/beta horseshoe RYU24_18190 IPR007197 Radical SAM RYU24_18190 IPR002792 TRAM domain RYU24_18190 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RYU24_18190 IPR020612 Methylthiotransferase, conserved site RYU24_18190 IPR013848 Methylthiotransferase, N-terminal RYU24_18190 IPR005839 Methylthiotransferase RYU24_18190 IPR006638 Elp3/MiaB/NifB RYU24_18190 IPR038135 Methylthiotransferase, N-terminal domain superfamily RYU24_18200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_18200 IPR035965 PAS domain superfamily RYU24_18200 IPR013767 PAS fold RYU24_18200 IPR000014 PAS domain RYU24_18200 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_18200 IPR005467 Histidine kinase domain RYU24_18200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_18200 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_18200 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_18210 IPR010114 DNA-binding transcriptional regulator NtrC RYU24_18210 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RYU24_18210 IPR025944 Sigma-54 interaction domain, conserved site RYU24_18210 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RYU24_18210 IPR002078 RNA polymerase sigma factor 54 interaction domain RYU24_18210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18210 IPR002197 DNA binding HTH domain, Fis-type RYU24_18210 IPR009057 Homeobox-like domain superfamily RYU24_18210 IPR011006 CheY-like superfamily RYU24_18210 IPR003593 AAA+ ATPase domain RYU24_18210 IPR001789 Signal transduction response regulator, receiver domain RYU24_18230 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_18230 IPR026904 GidA associated domain 3 RYU24_18230 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG RYU24_18230 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related RYU24_18230 IPR020595 MnmG-related, conserved site RYU24_18270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_18270 IPR004498 Ribosomal protein L11 methyltransferase RYU24_18290 IPR005412 DNA-binding protein Fis RYU24_18290 IPR009057 Homeobox-like domain superfamily RYU24_18290 IPR002197 DNA binding HTH domain, Fis-type RYU24_18300 IPR024051 AICAR transformylase, duplicated domain superfamily RYU24_18300 IPR016193 Cytidine deaminase-like RYU24_18300 IPR011607 Methylglyoxal synthase-like domain RYU24_18300 IPR036914 Methylglyoxal synthase-like domain superfamily RYU24_18300 IPR002695 Bifunctional purine biosynthesis protein PurH-like RYU24_18310 IPR016185 Pre-ATP-grasp domain superfamily RYU24_18310 IPR013815 ATP-grasp fold, subdomain 1 RYU24_18310 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RYU24_18310 IPR011761 ATP-grasp fold RYU24_18310 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RYU24_18310 IPR011054 Rudiment single hybrid motif RYU24_18310 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RYU24_18310 IPR000115 Phosphoribosylglycinamide synthetase RYU24_18310 IPR020559 Phosphoribosylglycinamide synthetase, conserved site RYU24_18310 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily RYU24_18340 IPR004872 Lipoprotein NlpA family RYU24_18350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18350 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain RYU24_18350 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal RYU24_18350 IPR018449 NIL domain RYU24_18350 IPR003439 ABC transporter-like RYU24_18350 IPR026253 Methionine import ATP-binding protein MetN RYU24_18350 IPR003593 AAA+ ATPase domain RYU24_18350 IPR017871 ABC transporter, conserved site RYU24_18360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_18360 IPR035906 MetI-like superfamily RYU24_18370 IPR004805 DNA polymerase III, alpha subunit RYU24_18370 IPR016195 Polymerase/histidinol phosphatase-like RYU24_18370 IPR003141 Polymerase/histidinol phosphatase, N-terminal RYU24_18370 IPR004013 PHP domain RYU24_18370 IPR040982 DNA polymerase III alpha subunit finger domain RYU24_18370 IPR029460 DNA polymerase, helix-hairpin-helix motif RYU24_18370 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain RYU24_18370 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain RYU24_18370 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RYU24_18380 IPR001537 tRNA/rRNA methyltransferase, SpoU type RYU24_18380 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_18380 IPR004384 RNA methyltransferase TrmJ/LasT RYU24_18380 IPR029028 Alpha/beta knot methyltransferases RYU24_18390 IPR001451 Hexapeptide repeat RYU24_18390 IPR018357 Hexapeptide transferase, conserved site RYU24_18390 IPR042122 Serine acetyltransferase, N-terminal domain superfamily RYU24_18390 IPR005881 Serine O-acetyltransferase RYU24_18390 IPR011004 Trimeric LpxA-like superfamily RYU24_18430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18430 IPR036678 MutS, connector domain superfamily RYU24_18430 IPR007860 DNA mismatch repair protein MutS, connector domain RYU24_18430 IPR036187 DNA mismatch repair protein MutS, core domain superfamily RYU24_18430 IPR007696 DNA mismatch repair protein MutS, core RYU24_18430 IPR016151 DNA mismatch repair protein MutS, N-terminal RYU24_18430 IPR000432 DNA mismatch repair protein MutS, C-terminal RYU24_18430 IPR017261 DNA mismatch repair protein MutS/MSH RYU24_18430 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RYU24_18430 IPR005748 DNA mismatch repair protein MutS RYU24_18430 IPR007861 DNA mismatch repair protein MutS, clamp RYU24_18440 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_18440 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RYU24_18440 IPR000813 7Fe ferredoxin RYU24_18440 IPR022569 Ferredoxin, C-terminal RYU24_18460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_18460 IPR002935 Class I-like SAM-dependent O-methyltransferase RYU24_18490 IPR023582 Impact family RYU24_18490 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_18490 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RYU24_18490 IPR036956 Impact, N-terminal domain superfamily RYU24_18490 IPR035647 EF-G domain III/V-like RYU24_18490 IPR001498 Impact, N-terminal RYU24_18500 IPR039562 Membrane fusion protein, biotin-lipoyl like domain RYU24_18500 IPR006144 Secretion protein HlyD, conserved site RYU24_18500 IPR010129 Type I secretion membrane fusion protein, HlyD family RYU24_18510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18510 IPR017871 ABC transporter, conserved site RYU24_18510 IPR003439 ABC transporter-like RYU24_18510 IPR036640 ABC transporter type 1, transmembrane domain superfamily RYU24_18510 IPR011527 ABC transporter type 1, transmembrane domain RYU24_18510 IPR003593 AAA+ ATPase domain RYU24_18510 IPR011917 ABC transporter, lipid A export, MsbA RYU24_18520 IPR005897 Peptidase C39, ABC-type bacteriocin transporter RYU24_18520 IPR003593 AAA+ ATPase domain RYU24_18520 IPR036640 ABC transporter type 1, transmembrane domain superfamily RYU24_18520 IPR003439 ABC transporter-like RYU24_18520 IPR017871 ABC transporter, conserved site RYU24_18520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18520 IPR011527 ABC transporter type 1, transmembrane domain RYU24_18520 IPR005074 Peptidase C39, bacteriocin processing RYU24_18520 IPR039421 Type I protein exporter RYU24_18570 IPR030921 LPS export ABC transporter, ATP-binding protein LptB RYU24_18570 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RYU24_18570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18570 IPR003593 AAA+ ATPase domain RYU24_18570 IPR003439 ABC transporter-like RYU24_18570 IPR017871 ABC transporter, conserved site RYU24_18580 IPR005653 Organic solvent tolerance-like, N-terminal RYU24_18580 IPR014340 Lipopolysaccharide export system protein LptA RYU24_18600 IPR036412 HAD-like superfamily RYU24_18600 IPR010023 KdsC family RYU24_18600 IPR023214 HAD superfamily RYU24_18610 IPR000644 CBS domain RYU24_18610 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RYU24_18610 IPR001347 Sugar isomerase (SIS) RYU24_18610 IPR035474 KpsF-like, SIS domain RYU24_18620 IPR015803 Cysteine-tRNA ligase RYU24_18620 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RYU24_18620 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RYU24_18620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_18620 IPR032678 tRNA synthetases class I, catalytic domain RYU24_18620 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RYU24_18640 IPR002514 Transposase IS3/IS911family RYU24_18640 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_18640 IPR009057 Homeobox-like domain superfamily RYU24_18650 IPR036397 Ribonuclease H superfamily RYU24_18650 IPR012337 Ribonuclease H-like superfamily RYU24_18650 IPR001584 Integrase, catalytic core RYU24_18650 IPR025948 HTH-like domain RYU24_18650 IPR038965 Transposase InsF-like RYU24_18660 IPR025948 HTH-like domain RYU24_18660 IPR001584 Integrase, catalytic core RYU24_18660 IPR012337 Ribonuclease H-like superfamily RYU24_18660 IPR036397 Ribonuclease H superfamily RYU24_18690 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RYU24_18690 IPR002524 Cation efflux protein RYU24_18690 IPR027469 Cation efflux transmembrane domain superfamily RYU24_18710 IPR017926 Glutamine amidotransferase RYU24_18710 IPR006274 Carbamoyl-phosphate synthase, small subunit RYU24_18710 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain RYU24_18710 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily RYU24_18710 IPR029062 Class I glutamine amidotransferase-like RYU24_18710 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain RYU24_18720 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily RYU24_18720 IPR023480 Uncharacterised protein family UPF0312/YceI RYU24_18720 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RYU24_18750 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RYU24_18750 IPR005475 Transketolase-like, pyrimidine-binding domain RYU24_18750 IPR005478 Transketolase, bacterial-like RYU24_18750 IPR020826 Transketolase binding site RYU24_18750 IPR033248 Transketolase, C-terminal domain RYU24_18750 IPR033247 Transketolase family RYU24_18750 IPR005474 Transketolase, N-terminal RYU24_18750 IPR029061 Thiamin diphosphate-binding fold RYU24_18760 IPR012902 Prokaryotic N-terminal methylation site RYU24_18760 IPR001082 Fimbrial protein pilin RYU24_18770 IPR022636 S-adenosylmethionine synthetase superfamily RYU24_18770 IPR002133 S-adenosylmethionine synthetase RYU24_18770 IPR022630 S-adenosylmethionine synthetase, C-terminal RYU24_18770 IPR022629 S-adenosylmethionine synthetase, central domain RYU24_18770 IPR022631 S-adenosylmethionine synthetase, conserved site RYU24_18770 IPR022628 S-adenosylmethionine synthetase, N-terminal RYU24_18790 IPR007272 Sulphur transport domain RYU24_18830 IPR013785 Aldolase-type TIM barrel RYU24_18830 IPR004136 Nitronate monooxygenase RYU24_18850 IPR018517 tRNA-dihydrouridine synthase, conserved site RYU24_18850 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RYU24_18850 IPR001269 tRNA-dihydrouridine synthase RYU24_18850 IPR032887 tRNA-dihydrouridine synthase B RYU24_18850 IPR035587 DUS-like, FMN-binding domain RYU24_18850 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RYU24_18850 IPR013785 Aldolase-type TIM barrel RYU24_18860 IPR011673 Protein of unknown function DUF1615 RYU24_18880 IPR005804 Fatty acid desaturase domain RYU24_18890 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_18890 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_18890 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RYU24_18890 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_18890 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RYU24_18890 IPR012675 Beta-grasp domain superfamily RYU24_18890 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RYU24_18890 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RYU24_18890 IPR036010 2Fe-2S ferredoxin-like superfamily RYU24_18890 IPR017938 Riboflavin synthase-like beta-barrel RYU24_18900 IPR023764 Transcriptional repressor HTH, FabR RYU24_18900 IPR001647 DNA-binding HTH domain, TetR-type RYU24_18900 IPR009057 Homeobox-like domain superfamily RYU24_18910 IPR000639 Epoxide hydrolase-like RYU24_18910 IPR000073 Alpha/beta hydrolase fold-1 RYU24_18910 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RYU24_18910 IPR029058 Alpha/Beta hydrolase fold RYU24_18930 IPR040765 RapA, N-terminal Tudor like domain 1 RYU24_18930 IPR040766 RapA, N-terminal Tudor-like domain 2 RYU24_18930 IPR000330 SNF2-related, N-terminal domain RYU24_18930 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_18930 IPR022737 RNA polymerase recycling, bacterial, C-terminal RYU24_18930 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_18930 IPR023949 RNA polymerase-associated protein RapA RYU24_18930 IPR001650 Helicase, C-terminal RYU24_18930 IPR038718 SNF2-like, N-terminal domain superfamily RYU24_18940 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_18940 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RYU24_18940 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_18970 IPR038084 GlcG-like domain superfamily RYU24_18970 IPR005624 Haem-degrading RYU24_18980 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RYU24_18980 IPR005814 Aminotransferase class-III RYU24_18980 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_18980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_18980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_18990 IPR034291 Thiamine phosphate synthase RYU24_18990 IPR022998 Thiamine phosphate synthase/TenI RYU24_18990 IPR036206 Thiamin phosphate synthase superfamily RYU24_18990 IPR013785 Aldolase-type TIM barrel RYU24_19020 IPR033469 CYTH-like domain superfamily RYU24_19020 IPR023577 CYTH domain RYU24_19020 IPR039013 Inorganic triphosphatase YgiF RYU24_19070 IPR001431 Peptidase M16, zinc-binding site RYU24_19070 IPR007863 Peptidase M16, C-terminal RYU24_19070 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RYU24_19070 IPR011765 Peptidase M16, N-terminal RYU24_19080 IPR003719 Phenazine biosynthesis PhzF protein RYU24_19100 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_19100 IPR001279 Metallo-beta-lactamase RYU24_19100 IPR017782 Hydroxyacylglutathione hydrolase RYU24_19100 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain RYU24_19100 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain RYU24_19130 IPR011009 Protein kinase-like domain superfamily RYU24_19130 IPR008266 Tyrosine-protein kinase, active site RYU24_19130 IPR000719 Protein kinase domain RYU24_19130 IPR013229 PEGA RYU24_19180 IPR003018 GAF domain RYU24_19180 IPR000160 GGDEF domain RYU24_19180 IPR029787 Nucleotide cyclase RYU24_19180 IPR029016 GAF-like domain superfamily RYU24_19190 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RYU24_19190 IPR000905 Gcp-like domain RYU24_19190 IPR017861 Kae1/TsaD family RYU24_19190 IPR017860 Peptidase M22, conserved site RYU24_19200 IPR038380 Ribosomal protein S21 superfamily RYU24_19200 IPR001911 Ribosomal protein S21 RYU24_19200 IPR018278 Ribosomal protein S21, conserved site RYU24_19210 IPR042184 YqeY/Aim41, N-terminal domain RYU24_19210 IPR019004 Uncharacterised protein YqeY/Aim41 RYU24_19210 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 RYU24_19210 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like RYU24_19230 IPR001915 Peptidase M48 RYU24_19230 IPR030873 Beta-barrel assembly-enhancing protease RYU24_19230 IPR011990 Tetratricopeptide-like helical domain superfamily RYU24_19240 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RYU24_19240 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RYU24_19240 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RYU24_19240 IPR036291 NAD(P)-binding domain superfamily RYU24_19240 IPR023756 Glyoxylate/hydroxypyruvate reductase B RYU24_19270 IPR035584 Amidophosphoribosyltransferase, N-terminal RYU24_19270 IPR017932 Glutamine amidotransferase type 2 domain RYU24_19270 IPR029055 Nucleophile aminohydrolases, N-terminal RYU24_19270 IPR000836 Phosphoribosyltransferase domain RYU24_19270 IPR029057 Phosphoribosyltransferase-like RYU24_19270 IPR005854 Amidophosphoribosyltransferase RYU24_19290 IPR001295 Dihydroorotate dehydrogenase, conserved site RYU24_19290 IPR005719 Dihydroorotate dehydrogenase, class 2 RYU24_19290 IPR005720 Dihydroorotate dehydrogenase domain RYU24_19290 IPR013785 Aldolase-type TIM barrel RYU24_19290 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RYU24_19330 IPR036291 NAD(P)-binding domain superfamily RYU24_19330 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_19330 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RYU24_19330 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RYU24_19330 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RYU24_19330 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RYU24_19340 IPR029479 Nitroreductase RYU24_19340 IPR026021 Putative NAD(P)H nitroreductase YdjA-like RYU24_19340 IPR000415 Nitroreductase-like RYU24_19360 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RYU24_19360 IPR014014 RNA helicase, DEAD-box type, Q motif RYU24_19360 IPR023554 ATP-dependent RNA helicase RhlB type RYU24_19360 IPR001650 Helicase, C-terminal RYU24_19360 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_19360 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_19360 IPR011545 DEAD/DEAH box helicase domain RYU24_19370 IPR012156 Cold shock, CspA RYU24_19370 IPR011129 Cold shock domain RYU24_19370 IPR019844 Cold-shock (CSD) domain RYU24_19370 IPR002059 Cold-shock protein, DNA-binding RYU24_19370 IPR012340 Nucleic acid-binding, OB-fold RYU24_19390 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RYU24_19390 IPR013324 RNA polymerase sigma factor, region 3/4-like RYU24_19390 IPR013325 RNA polymerase sigma factor, region 2 RYU24_19390 IPR007630 RNA polymerase sigma-70 region 4 RYU24_19390 IPR007627 RNA polymerase sigma-70 region 2 RYU24_19390 IPR009042 RNA polymerase sigma-70 region 1.2 RYU24_19390 IPR014284 RNA polymerase sigma-70 like domain RYU24_19390 IPR000943 RNA polymerase sigma-70 RYU24_19400 IPR006696 Protein of unknown function DUF423 RYU24_19420 IPR033983 Thiazole synthase ThiG RYU24_19420 IPR008867 Thiazole synthase RYU24_19420 IPR013785 Aldolase-type TIM barrel RYU24_19450 IPR029039 Flavoprotein-like superfamily RYU24_19450 IPR003680 Flavodoxin-like fold RYU24_19460 IPR040079 Glutathione Transferase family RYU24_19460 IPR004045 Glutathione S-transferase, N-terminal RYU24_19460 IPR004046 Glutathione S-transferase, C-terminal RYU24_19460 IPR036249 Thioredoxin-like superfamily RYU24_19460 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RYU24_19460 IPR010987 Glutathione S-transferase, C-terminal-like RYU24_19470 IPR018045 Sulphate anion transporter, conserved site RYU24_19470 IPR011547 SLC26A/SulP transporter domain RYU24_19470 IPR001902 SLC26A/SulP transporter RYU24_19470 IPR002645 STAS domain RYU24_19470 IPR036513 STAS domain superfamily RYU24_19480 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type RYU24_19480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_19520 IPR000873 AMP-dependent synthetase/ligase RYU24_19520 IPR020845 AMP-binding, conserved site RYU24_19520 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_19530 IPR009057 Homeobox-like domain superfamily RYU24_19530 IPR001647 DNA-binding HTH domain, TetR-type RYU24_19530 IPR041642 HTH-type transcriptional repressor KstR, C-terminal RYU24_19540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_19540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_19540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_19540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_19540 IPR006089 Acyl-CoA dehydrogenase, conserved site RYU24_19540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_19540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_19550 IPR034733 Acetyl-CoA carboxylase RYU24_19550 IPR029045 ClpP/crotonase-like domain superfamily RYU24_19550 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RYU24_19550 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RYU24_19560 IPR029045 ClpP/crotonase-like domain superfamily RYU24_19560 IPR014748 Enoyl-CoA hydratase, C-terminal RYU24_19560 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RYU24_19560 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_19570 IPR011761 ATP-grasp fold RYU24_19570 IPR011053 Single hybrid motif RYU24_19570 IPR016185 Pre-ATP-grasp domain superfamily RYU24_19570 IPR041265 Propionyl-coenzyme A carboxylase, BT domain RYU24_19570 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RYU24_19570 IPR011054 Rudiment single hybrid motif RYU24_19570 IPR005482 Biotin carboxylase, C-terminal RYU24_19570 IPR011764 Biotin carboxylation domain RYU24_19570 IPR001882 Biotin-binding site RYU24_19570 IPR005481 Biotin carboxylase-like, N-terminal domain RYU24_19570 IPR013815 ATP-grasp fold, subdomain 1 RYU24_19570 IPR000089 Biotin/lipoyl attachment RYU24_19580 IPR013785 Aldolase-type TIM barrel RYU24_19580 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site RYU24_19580 IPR000891 Pyruvate carboxyltransferase RYU24_19590 IPR012792 3-oxoacid CoA-transferase, subunit A RYU24_19590 IPR004165 Coenzyme A transferase family I RYU24_19590 IPR004163 Coenzyme A transferase binding site RYU24_19590 IPR037171 NagB/RpiA transferase-like RYU24_19600 IPR037171 NagB/RpiA transferase-like RYU24_19600 IPR004164 Coenzyme A transferase active site RYU24_19600 IPR004165 Coenzyme A transferase family I RYU24_19600 IPR012791 3-oxoacid CoA-transferase, subunit B RYU24_19610 IPR006161 Conserved hypothetical protein CHP00336 RYU24_19610 IPR006160 Short chain fatty acid transporter AtoE RYU24_19620 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel RYU24_19620 IPR006664 Outer membrane protein, bacterial RYU24_19620 IPR002368 Outer membrane protein, OmpA RYU24_19620 IPR006665 OmpA-like domain RYU24_19620 IPR006690 Outer membrane protein, OmpA-like, conserved site RYU24_19620 IPR036737 OmpA-like domain superfamily RYU24_19620 IPR000498 Outer membrane protein OmpA-like, transmembrane domain RYU24_19630 IPR032466 Metal-dependent hydrolase RYU24_19630 IPR006680 Amidohydrolase-related RYU24_19630 IPR004722 Dihydroorotase RYU24_19630 IPR011059 Metal-dependent hydrolase, composite domain superfamily RYU24_19640 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RYU24_19640 IPR006130 Aspartate/ornithine carbamoyltransferase RYU24_19640 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RYU24_19640 IPR002082 Aspartate carbamoyltransferase RYU24_19640 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RYU24_19660 IPR004114 THUMP domain RYU24_19660 IPR017244 Ribosomal RNA large subunit methyltransferase K/L RYU24_19660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_19660 IPR000241 Putative RNA methylase domain RYU24_19660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_19660 IPR019614 S-adenosylmethionine-dependent methyltransferase RYU24_19670 IPR003593 AAA+ ATPase domain RYU24_19670 IPR017730 Chaperonin ClpB RYU24_19670 IPR019489 Clp ATPase, C-terminal RYU24_19670 IPR036628 Clp, N-terminal domain superfamily RYU24_19670 IPR004176 Clp, N-terminal RYU24_19670 IPR001270 ClpA/B family RYU24_19670 IPR018368 ClpA/B, conserved site 1 RYU24_19670 IPR028299 ClpA/B, conserved site 2 RYU24_19670 IPR041546 ClpA/ClpB, AAA lid domain RYU24_19670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_19670 IPR003959 ATPase, AAA-type, core RYU24_19690 IPR020471 Aldo/keto reductase RYU24_19690 IPR023210 NADP-dependent oxidoreductase domain RYU24_19690 IPR036812 NADP-dependent oxidoreductase domain superfamily RYU24_19700 IPR018488 Cyclic nucleotide-binding, conserved site RYU24_19700 IPR000595 Cyclic nucleotide-binding domain RYU24_19700 IPR012318 Crp-type HTH domain RYU24_19700 IPR014710 RmlC-like jelly roll fold RYU24_19700 IPR018335 Transcription regulator HTH, Crp-type, conserved site RYU24_19700 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_19700 IPR036390 Winged helix DNA-binding domain superfamily RYU24_19700 IPR018490 Cyclic nucleotide-binding-like RYU24_19710 IPR015946 K homology domain-like, alpha/beta RYU24_19710 IPR003718 OsmC/Ohr family RYU24_19710 IPR036102 OsmC/Ohr superfamily RYU24_19720 IPR029052 Metallo-dependent phosphatase-like RYU24_19720 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase RYU24_19720 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_19720 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE RYU24_19720 IPR041780 PrpE-like, metallophosphatase domain RYU24_19730 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric RYU24_19740 IPR025161 Putative transposase IS4/IS5 family RYU24_19760 IPR025403 Domain of unknown function DUF4129 RYU24_19760 IPR038765 Papain-like cysteine peptidase superfamily RYU24_19760 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal RYU24_19760 IPR002931 Transglutaminase-like RYU24_19780 IPR011703 ATPase, AAA-3 RYU24_19780 IPR041628 ChlI/MoxR, AAA lid domain RYU24_19780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_19790 IPR007423 Selenoprotein, putative RYU24_19800 IPR003706 CstA, N-terminal domain RYU24_19800 IPR025299 CstA, C-terminal domain RYU24_19810 IPR012340 Nucleic acid-binding, OB-fold RYU24_19810 IPR015365 Elongation factor P, C-terminal RYU24_19810 IPR008991 Translation protein SH3-like domain superfamily RYU24_19810 IPR014722 Ribosomal protein L2, domain 2 RYU24_19810 IPR001059 Translation elongation factor P/YeiP, central RYU24_19810 IPR011768 Translation elongation factor P RYU24_19810 IPR013185 Translation elongation factor, KOW-like RYU24_19810 IPR020599 Translation elongation factor P/YeiP RYU24_19820 IPR013785 Aldolase-type TIM barrel RYU24_19820 IPR022462 Lysine-2,3-aminomutase-like RYU24_19820 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase RYU24_19820 IPR007197 Radical SAM RYU24_19850 IPR002150 Ribosomal protein L31 RYU24_19850 IPR042105 Ribosomal protein L31 superfamily RYU24_19850 IPR027491 Ribosomal protein L31 type A RYU24_19850 IPR034704 L28p-like RYU24_19860 IPR038770 Sodium/solute symporter superfamily RYU24_19860 IPR016833 Putative sodium bile acid cotransporter RYU24_19870 IPR037523 Vicinal oxygen chelate (VOC) domain RYU24_19870 IPR018146 Glyoxalase I, conserved site RYU24_19870 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RYU24_19870 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RYU24_19870 IPR004361 Glyoxalase I RYU24_19880 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 RYU24_19880 IPR011701 Major facilitator superfamily RYU24_19880 IPR020846 Major facilitator superfamily domain RYU24_19880 IPR036259 MFS transporter superfamily RYU24_19890 IPR041699 Lon protease, AAA domain RYU24_19890 IPR008269 Peptidase S16, Lon proteolytic domain RYU24_19890 IPR027065 Lon protease RYU24_19890 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_19890 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_19900 IPR002109 Glutaredoxin RYU24_19900 IPR014434 Monothiol glutaredoxin RYU24_19900 IPR004480 Monothiol glutaredoxin-related RYU24_19900 IPR036249 Thioredoxin-like superfamily RYU24_19900 IPR033658 Glutaredoxin, PICOT-like RYU24_19910 IPR005814 Aminotransferase class-III RYU24_19910 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_19910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_19910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_19910 IPR004636 Acetylornithine/Succinylornithine transaminase family RYU24_19920 IPR036390 Winged helix DNA-binding domain superfamily RYU24_19920 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_19920 IPR000847 Transcription regulator HTH, LysR RYU24_19920 IPR005119 LysR, substrate-binding RYU24_19930 IPR018392 LysM domain RYU24_19930 IPR016047 Peptidase M23 RYU24_19930 IPR036779 LysM domain superfamily RYU24_19930 IPR011055 Duplicated hybrid motif RYU24_19940 IPR036523 SurE-like phosphatase/nucleotidase superfamily RYU24_19940 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RYU24_19940 IPR030048 Survival protein SurE RYU24_19970 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RYU24_19970 IPR015956 Penicillin-binding protein, C-terminal domain superfamily RYU24_19970 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RYU24_19970 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RYU24_19970 IPR012338 Beta-lactamase/transpeptidase-like RYU24_19970 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily RYU24_19980 IPR001451 Hexapeptide repeat RYU24_19980 IPR011004 Trimeric LpxA-like superfamily RYU24_20000 IPR003593 AAA+ ATPase domain RYU24_20000 IPR032524 ABC transporter Uup, C-terminal RYU24_20000 IPR032781 ABC-transporter extension domain RYU24_20000 IPR003439 ABC transporter-like RYU24_20000 IPR017871 ABC transporter, conserved site RYU24_20000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_20000 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RYU24_20010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_20010 IPR017871 ABC transporter, conserved site RYU24_20010 IPR032781 ABC-transporter extension domain RYU24_20010 IPR003593 AAA+ ATPase domain RYU24_20010 IPR003439 ABC transporter-like RYU24_20020 IPR002656 Acyltransferase 3 RYU24_20020 IPR036514 SGNH hydrolase superfamily RYU24_20030 IPR020476 NUDIX hydrolase RYU24_20030 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_20030 IPR020084 NUDIX hydrolase, conserved site RYU24_20030 IPR000086 NUDIX hydrolase domain RYU24_20030 IPR033713 Phosphatase NudJ RYU24_20040 IPR004506 tRNA-specific 2-thiouridylase RYU24_20040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_20040 IPR023382 Adenine nucleotide alpha hydrolase-like domains RYU24_20050 IPR007451 High frequency lysogenization protein HflD RYU24_20050 IPR035932 HflD-like superfamily RYU24_20060 IPR024083 Fumarase/histidase, N-terminal RYU24_20060 IPR020557 Fumarate lyase, conserved site RYU24_20060 IPR000362 Fumarate lyase family RYU24_20060 IPR022761 Fumarate lyase, N-terminal RYU24_20060 IPR008948 L-Aspartase-like RYU24_20060 IPR004769 Adenylosuccinate lyase RYU24_20060 IPR013539 Adenylosuccinate lyase PurB, C-terminal RYU24_20100 IPR013703 Peptidase S49, N-terminal proteobacteria RYU24_20100 IPR029045 ClpP/crotonase-like domain superfamily RYU24_20100 IPR002142 Peptidase S49 RYU24_20120 IPR003593 AAA+ ATPase domain RYU24_20120 IPR003439 ABC transporter-like RYU24_20120 IPR017871 ABC transporter, conserved site RYU24_20120 IPR015850 ABC transporter, phosphate import, PstB RYU24_20120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_20120 IPR005670 Phosphate transport system permease protein 1 RYU24_20130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_20130 IPR035906 MetI-like superfamily RYU24_20130 IPR005672 Phosphate transport system permease protein PstA RYU24_20140 IPR011864 Phosphate ABC transporter, permease protein PstC RYU24_20140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_20140 IPR035906 MetI-like superfamily RYU24_20150 IPR024370 PBP domain RYU24_20150 IPR011862 Phosphate binding protein RYU24_20160 IPR004841 Amino acid permease/ SLC12A domain RYU24_20160 IPR004840 Amino acid permease, conserved site RYU24_20170 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RYU24_20170 IPR000399 TPP-binding enzyme, conserved site RYU24_20170 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme RYU24_20170 IPR012000 Thiamine pyrophosphate enzyme, central domain RYU24_20170 IPR029061 Thiamin diphosphate-binding fold RYU24_20170 IPR029035 DHS-like NAD/FAD-binding domain superfamily RYU24_20170 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RYU24_20180 IPR011991 ArsR-like helix-turn-helix domain RYU24_20180 IPR000485 AsnC-type HTH domain RYU24_20180 IPR011008 Dimeric alpha-beta barrel RYU24_20180 IPR019888 Transcription regulator AsnC-type RYU24_20180 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_20180 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RYU24_20180 IPR036390 Winged helix DNA-binding domain superfamily RYU24_20180 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RYU24_20190 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_20190 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_20190 IPR016160 Aldehyde dehydrogenase, cysteine active site RYU24_20190 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_20190 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_20190 IPR015590 Aldehyde dehydrogenase domain RYU24_20200 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RYU24_20200 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RYU24_20200 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RYU24_20210 IPR002129 Pyridoxal phosphate-dependent decarboxylase RYU24_20210 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_20210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_20210 IPR021115 Pyridoxal-phosphate binding site RYU24_20220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_20220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_20220 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_20220 IPR004637 2,4-diaminobutyrate 4-transaminase RYU24_20220 IPR005814 Aminotransferase class-III RYU24_20240 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RYU24_20240 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RYU24_20240 IPR033879 Undecaprenyl-diphosphatase RYU24_20250 IPR011529 Glutamate 5-kinase RYU24_20250 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RYU24_20250 IPR019797 Glutamate 5-kinase, conserved site RYU24_20250 IPR002478 PUA domain RYU24_20250 IPR015947 PUA-like superfamily RYU24_20250 IPR036974 PUA domain superfamily RYU24_20250 IPR036393 Acetylglutamate kinase-like superfamily RYU24_20250 IPR001048 Aspartate/glutamate/uridylate kinase RYU24_20250 IPR001057 Glutamate/acetylglutamate kinase RYU24_20250 IPR041739 Glutamate-5-kinase domain RYU24_20260 IPR035101 GTP-binding protein, Obg-type RYU24_20260 IPR031167 OBG-type guanine nucleotide-binding (G) domain RYU24_20260 IPR006074 GTP1/OBG, conserved site RYU24_20260 IPR006169 GTP1/OBG domain RYU24_20260 IPR006073 GTP binding domain RYU24_20260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_20260 IPR014100 GTP-binding protein Obg/CgtA RYU24_20260 IPR036726 GTP1/OBG domain superfamily RYU24_20290 IPR002577 Helix-turn-helix, HxlR type RYU24_20290 IPR036390 Winged helix DNA-binding domain superfamily RYU24_20290 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_20300 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RYU24_20300 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RYU24_20300 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RYU24_20300 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RYU24_20300 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RYU24_20300 IPR036291 NAD(P)-binding domain superfamily RYU24_20310 IPR000620 EamA domain RYU24_20310 IPR004626 RarD protein RYU24_20320 IPR002446 Lipocalin, bacterial RYU24_20320 IPR000566 Lipocalin/cytosolic fatty-acid binding domain RYU24_20320 IPR012674 Calycin RYU24_20320 IPR022271 Lipocalin, ApoD type RYU24_20320 IPR022272 Lipocalin family conserved site RYU24_20330 IPR036876 UVR domain superfamily RYU24_20330 IPR024759 UvrB, YAD/RRR-motif-containing domain RYU24_20330 IPR041471 UvrB, interaction domain RYU24_20330 IPR004807 UvrABC system, subunit B RYU24_20330 IPR006935 Helicase/UvrB, N-terminal RYU24_20330 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_20330 IPR001650 Helicase, C-terminal RYU24_20330 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_20330 IPR001943 UVR domain RYU24_20420 IPR004684 2-keto-3-deoxygluconate permease RYU24_20420 IPR018395 2-keto-3-deoxygluconate permease, subgroup RYU24_20430 IPR017654 Galactarate dehydratase GarD-like RYU24_20430 IPR013974 SAF domain RYU24_20430 IPR007392 D-galactarate/Altronate dehydratase, C-terminal RYU24_20440 IPR036390 Winged helix DNA-binding domain superfamily RYU24_20440 IPR005119 LysR, substrate-binding RYU24_20440 IPR000847 Transcription regulator HTH, LysR RYU24_20440 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_20450 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_20450 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RYU24_20450 IPR023753 FAD/NAD(P)-binding domain RYU24_20450 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RYU24_20450 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RYU24_20450 IPR022962 Soluble pyridine nucleotide transhydrogenase RYU24_20460 IPR003698 Lipoyl synthase RYU24_20460 IPR007197 Radical SAM RYU24_20460 IPR006638 Elp3/MiaB/NifB RYU24_20460 IPR013785 Aldolase-type TIM barrel RYU24_20470 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_20470 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_20470 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_20470 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RYU24_20470 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_20470 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_20470 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_20490 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RYU24_20490 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RYU24_20490 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RYU24_20490 IPR036291 NAD(P)-binding domain superfamily RYU24_20490 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RYU24_20490 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_20490 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RYU24_20500 IPR019918 Pyrimidine permease RutG, predicted RYU24_20500 IPR006042 Xanthine/uracil permease RYU24_20500 IPR006043 Xanthine/uracil/vitamin C permease RYU24_20510 IPR019917 FMN reductase (NADH) RutF RYU24_20510 IPR002563 Flavin reductase like domain RYU24_20510 IPR012349 FMN-binding split barrel RYU24_20520 IPR019898 Putative aminoacrylate peracid reductase RutC RYU24_20520 IPR035959 RutC-like superfamily RYU24_20520 IPR006175 YjgF/YER057c/UK114 family RYU24_20530 IPR000868 Isochorismatase-like RYU24_20530 IPR036380 Isochorismatase-like superfamily RYU24_20530 IPR019916 Isochorismatase, RutB RYU24_20540 IPR019914 Pyrimidine monooxygenase RutA RYU24_20540 IPR036661 Luciferase-like domain superfamily RYU24_20540 IPR011251 Luciferase-like domain RYU24_20550 IPR029058 Alpha/Beta hydrolase fold RYU24_20550 IPR000073 Alpha/beta hydrolase fold-1 RYU24_20550 IPR019913 Pyrimidine utilisation protein RutD RYU24_20570 IPR001940 Peptidase S1C RYU24_20570 IPR009003 Peptidase S1, PA clan RYU24_20570 IPR011782 Peptidase S1C, Do RYU24_20570 IPR001478 PDZ domain RYU24_20570 IPR036034 PDZ superfamily RYU24_20580 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily RYU24_20580 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RYU24_20590 IPR019832 Manganese/iron superoxide dismutase, C-terminal RYU24_20590 IPR019833 Manganese/iron superoxide dismutase, binding site RYU24_20590 IPR001189 Manganese/iron superoxide dismutase RYU24_20590 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily RYU24_20590 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily RYU24_20590 IPR019831 Manganese/iron superoxide dismutase, N-terminal RYU24_20630 IPR006370 4-hydroxybenzoate polyprenyltransferase-like RYU24_20630 IPR039653 Prenyltransferase RYU24_20630 IPR000537 UbiA prenyltransferase family RYU24_20640 IPR007440 Chorismate--pyruvate lyase RYU24_20640 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RYU24_20660 IPR027302 Glutamine synthetase, N-terminal conserved site RYU24_20660 IPR001637 Glutamine synthetase class-I, adenylation site RYU24_20660 IPR004809 Glutamine synthetase type I RYU24_20660 IPR027303 Glutamine synthetase, glycine-rich site RYU24_20660 IPR008146 Glutamine synthetase, catalytic domain RYU24_20660 IPR008147 Glutamine synthetase, beta-Grasp domain RYU24_20660 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RYU24_20660 IPR036651 Glutamine synthetase, N-terminal domain superfamily RYU24_20670 IPR025161 Putative transposase IS4/IS5 family RYU24_20680 IPR017926 Glutamine amidotransferase RYU24_20680 IPR029062 Class I glutamine amidotransferase-like RYU24_20680 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RYU24_20690 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily RYU24_20690 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily RYU24_20690 IPR017459 Glycosyl transferase family 3, N-terminal domain RYU24_20690 IPR005940 Anthranilate phosphoribosyl transferase RYU24_20690 IPR000312 Glycosyl transferase, family 3 RYU24_20700 IPR013785 Aldolase-type TIM barrel RYU24_20700 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RYU24_20700 IPR013798 Indole-3-glycerol phosphate synthase RYU24_20700 IPR011060 Ribulose-phosphate binding barrel RYU24_20720 IPR020602 GTP cyclohydrolase I domain RYU24_20720 IPR018234 GTP cyclohydrolase I, conserved site RYU24_20720 IPR001474 GTP cyclohydrolase I RYU24_20750 IPR009050 Globin-like superfamily RYU24_20750 IPR012292 Globin/Protoglobin RYU24_20750 IPR000160 GGDEF domain RYU24_20750 IPR039435 Diguanylate cyclase DosC, globin sensor domain RYU24_20750 IPR029787 Nucleotide cyclase RYU24_20780 IPR008535 Protein of unknown function DUF817 RYU24_20790 IPR038071 UROD/MetE-like superfamily RYU24_20790 IPR006361 Uroporphyrinogen decarboxylase HemE RYU24_20790 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RYU24_20810 IPR003829 Pirin, N-terminal domain RYU24_20810 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain RYU24_20810 IPR012093 Pirin RYU24_20810 IPR011051 RmlC-like cupin domain superfamily RYU24_20810 IPR014710 RmlC-like jelly roll fold RYU24_20820 IPR007848 Methyltransferase small domain RYU24_20820 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RYU24_20820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_20820 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_20820 IPR004556 Methyltransferase HemK-like RYU24_20850 IPR036653 CinA-like, C-terminal RYU24_20850 IPR008136 CinA, C-terminal RYU24_20850 IPR041424 CinA, KH domain RYU24_20850 IPR008135 Competence-induced protein CinA RYU24_20850 IPR036425 MoaB/Mog-like domain superfamily RYU24_20850 IPR001453 MoaB/Mog domain RYU24_20880 IPR002059 Cold-shock protein, DNA-binding RYU24_20880 IPR012340 Nucleic acid-binding, OB-fold RYU24_20880 IPR011129 Cold shock domain RYU24_20880 IPR012156 Cold shock, CspA RYU24_20880 IPR019844 Cold-shock (CSD) domain RYU24_20890 IPR015884 Malic enzyme, conserved site RYU24_20890 IPR012301 Malic enzyme, N-terminal domain RYU24_20890 IPR037062 Malic enzyme, N-terminal domain superfamily RYU24_20890 IPR012302 Malic enzyme, NAD-binding RYU24_20890 IPR001891 Malic oxidoreductase RYU24_20890 IPR036291 NAD(P)-binding domain superfamily RYU24_20890 IPR023667 NAD-dependent malic enzyme, proteobacteria RYU24_20910 IPR014168 Tol-Pal system protein TolR RYU24_20910 IPR003400 Biopolymer transport protein ExbD/TolR RYU24_20920 IPR002898 MotA/TolQ/ExbB proton channel RYU24_20920 IPR014163 Tol-Pal system, TolQ RYU24_20930 IPR011042 Six-bladed beta-propeller, TolB-like RYU24_20930 IPR003431 Beta propeller phytase RYU24_20950 IPR011006 CheY-like superfamily RYU24_20950 IPR000160 GGDEF domain RYU24_20950 IPR029787 Nucleotide cyclase RYU24_20950 IPR001789 Signal transduction response regulator, receiver domain RYU24_20960 IPR020449 Transcription regulator HTH, AraC- type RYU24_20960 IPR018060 DNA binding HTH domain, AraC-type RYU24_20960 IPR009057 Homeobox-like domain superfamily RYU24_20960 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RYU24_20980 IPR017850 Alkaline-phosphatase-like, core domain superfamily RYU24_20980 IPR018299 Alkaline phosphatase, active site RYU24_20980 IPR001952 Alkaline phosphatase RYU24_20990 IPR001952 Alkaline phosphatase RYU24_20990 IPR018299 Alkaline phosphatase, active site RYU24_20990 IPR017850 Alkaline-phosphatase-like, core domain superfamily RYU24_21010 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RYU24_21010 IPR023753 FAD/NAD(P)-binding domain RYU24_21010 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_21010 IPR013785 Aldolase-type TIM barrel RYU24_21030 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RYU24_21030 IPR023437 Argininosuccinate synthase, type 2 subfamily RYU24_21030 IPR001518 Argininosuccinate synthase RYU24_21030 IPR018223 Argininosuccinate synthase, conserved site RYU24_21030 IPR023434 Argininosuccinate synthase, type 1 subfamily RYU24_21030 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail RYU24_21030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_21040 IPR000160 GGDEF domain RYU24_21040 IPR029787 Nucleotide cyclase RYU24_21040 IPR000014 PAS domain RYU24_21040 IPR000700 PAS-associated, C-terminal RYU24_21040 IPR035965 PAS domain superfamily RYU24_21040 IPR013656 PAS fold-4 RYU24_21050 IPR004721 Dihydroorotase homodimeric type RYU24_21050 IPR006680 Amidohydrolase-related RYU24_21050 IPR032466 Metal-dependent hydrolase RYU24_21050 IPR002195 Dihydroorotase, conserved site RYU24_21060 IPR005987 Ribonuclease T RYU24_21060 IPR012337 Ribonuclease H-like superfamily RYU24_21060 IPR036397 Ribonuclease H superfamily RYU24_21060 IPR013520 Exonuclease, RNase T/DNA polymerase III RYU24_21070 IPR004841 Amino acid permease/ SLC12A domain RYU24_21070 IPR004840 Amino acid permease, conserved site RYU24_21080 IPR004841 Amino acid permease/ SLC12A domain RYU24_21080 IPR004840 Amino acid permease, conserved site RYU24_21130 IPR013785 Aldolase-type TIM barrel RYU24_21130 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_21130 IPR023753 FAD/NAD(P)-binding domain RYU24_21130 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RYU24_21140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_21140 IPR035906 MetI-like superfamily RYU24_21140 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RYU24_21150 IPR035906 MetI-like superfamily RYU24_21150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_21160 IPR030678 Peptide/nickel binding protein, MppA-type RYU24_21160 IPR039424 Solute-binding protein family 5 RYU24_21160 IPR000914 Solute-binding protein family 5 domain RYU24_21170 IPR018392 LysM domain RYU24_21170 IPR036779 LysM domain superfamily RYU24_21170 IPR023346 Lysozyme-like domain superfamily RYU24_21170 IPR000189 Prokaryotic transglycosylase, active site RYU24_21170 IPR008258 Transglycosylase SLT domain 1 RYU24_21180 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain RYU24_21180 IPR006309 DNA polymerase 3, epsilon subunit RYU24_21180 IPR013520 Exonuclease, RNase T/DNA polymerase III RYU24_21180 IPR012337 Ribonuclease H-like superfamily RYU24_21180 IPR036397 Ribonuclease H superfamily RYU24_21200 IPR000086 NUDIX hydrolase domain RYU24_21200 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_21200 IPR015376 Zinc ribbon, NADH pyrophosphatase RYU24_21200 IPR022925 NADH pyrophosphatase NudC RYU24_21210 IPR019826 Carboxylesterase type B, active site RYU24_21210 IPR029058 Alpha/Beta hydrolase fold RYU24_21210 IPR013094 Alpha/beta hydrolase fold-3 RYU24_21220 IPR007055 BON domain RYU24_21220 IPR014004 Transport-associated and nodulation domain, bacteria RYU24_21230 IPR011335 Restriction endonuclease type II-like RYU24_21230 IPR011856 tRNA endonuclease-like domain superfamily RYU24_21230 IPR003509 Uncharacterised protein family UPF0102 RYU24_21240 IPR007443 Penicillin-binding protein activator LpoA RYU24_21240 IPR028082 Periplasmic binding protein-like I RYU24_21240 IPR011990 Tetratricopeptide-like helical domain superfamily RYU24_21250 IPR008189 rRNA small subunit methyltransferase I RYU24_21250 IPR014776 Tetrapyrrole methylase, subdomain 2 RYU24_21250 IPR014777 Tetrapyrrole methylase, subdomain 1 RYU24_21250 IPR035996 Tetrapyrrole methylase superfamily RYU24_21250 IPR000878 Tetrapyrrole methylase RYU24_21250 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RYU24_21270 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 RYU24_21270 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RYU24_21270 IPR002938 FAD-binding domain RYU24_21270 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_21280 IPR002938 FAD-binding domain RYU24_21280 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_21280 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RYU24_21280 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase RYU24_21280 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 RYU24_21300 IPR025668 Transposase DDE domain RYU24_21330 IPR007211 Protein of unknown function DUF378 RYU24_21340 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RYU24_21340 IPR000994 Peptidase M24 RYU24_21340 IPR001714 Peptidase M24, methionine aminopeptidase RYU24_21340 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RYU24_21340 IPR007865 Aminopeptidase P, N-terminal RYU24_21340 IPR036005 Creatinase/aminopeptidase-like RYU24_21350 IPR011978 Uncharacterised protein family UPF0149 RYU24_21350 IPR036255 YgfB-like superfamily RYU24_21380 IPR002698 5-formyltetrahydrofolate cyclo-ligase RYU24_21380 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily RYU24_21380 IPR037171 NagB/RpiA transferase-like RYU24_21390 IPR015947 PUA-like superfamily RYU24_21390 IPR027543 Lon protease, bacterial RYU24_21390 IPR027065 Lon protease RYU24_21390 IPR003111 Lon, substrate-binding domain RYU24_21390 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_21390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_21390 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_21390 IPR008268 Peptidase S16, active site RYU24_21390 IPR003959 ATPase, AAA-type, core RYU24_21390 IPR003593 AAA+ ATPase domain RYU24_21390 IPR008269 Peptidase S16, Lon proteolytic domain RYU24_21390 IPR004815 Lon protease, bacterial/eukaryotic-type RYU24_21400 IPR007484 Peptidase M28 RYU24_21410 IPR029028 Alpha/beta knot methyltransferases RYU24_21410 IPR003742 RNA methyltransferase RlmH RYU24_21410 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_21420 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RYU24_21420 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type RYU24_21440 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RYU24_21440 IPR033524 Leu/Phe/Val dehydrogenases active site RYU24_21440 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RYU24_21440 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RYU24_21440 IPR014362 Glutamate dehydrogenase RYU24_21440 IPR036291 NAD(P)-binding domain superfamily RYU24_21440 IPR033922 NAD(P) binding domain of glutamate dehydrogenase RYU24_21450 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB RYU24_21450 IPR011005 Dihydropteroate synthase-like RYU24_21450 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RYU24_21450 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria RYU24_21450 IPR007202 4Fe-4S domain RYU24_21450 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_21460 IPR005759 Endonuclease III RYU24_21460 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RYU24_21460 IPR003265 HhH-GPD domain RYU24_21460 IPR004035 Endonuclease III, iron-sulphur binding site RYU24_21460 IPR000445 Helix-hairpin-helix motif RYU24_21460 IPR004036 Endonuclease III-like, conserved site-2 RYU24_21460 IPR011257 DNA glycosylase RYU24_21460 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RYU24_21480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_21480 IPR006259 Adenylate kinase subfamily RYU24_21480 IPR000850 Adenylate kinase/UMP-CMP kinase RYU24_21480 IPR033690 Adenylate kinase, conserved site RYU24_21480 IPR007862 Adenylate kinase, active site lid domain RYU24_21510 IPR017790 Penicillin-binding protein 2 RYU24_21510 IPR001460 Penicillin-binding protein, transpeptidase RYU24_21510 IPR036138 Penicillin-binding protein, dimerisation domain superfamily RYU24_21510 IPR012338 Beta-lactamase/transpeptidase-like RYU24_21510 IPR005311 Penicillin-binding protein, dimerisation domain RYU24_21520 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_21520 IPR004398 RNA methyltransferase, RsmD RYU24_21520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_21550 IPR036291 NAD(P)-binding domain superfamily RYU24_21550 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_21570 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RYU24_21570 IPR002123 Phospholipid/glycerol acyltransferase RYU24_21610 IPR027413 GroEL-like equatorial domain superfamily RYU24_21610 IPR027409 GroEL-like apical domain superfamily RYU24_21610 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RYU24_21610 IPR001844 Chaperonin Cpn60 RYU24_21610 IPR018370 Chaperonin Cpn60, conserved site RYU24_21610 IPR002423 Chaperonin Cpn60/TCP-1 family RYU24_21620 IPR020818 GroES chaperonin family RYU24_21620 IPR037124 GroES chaperonin superfamily RYU24_21620 IPR018369 Chaperonin GroES, conserved site RYU24_21620 IPR011032 GroES-like superfamily RYU24_21640 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RYU24_21640 IPR001206 Diacylglycerol kinase, catalytic domain RYU24_21640 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RYU24_21650 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain RYU24_21650 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal RYU24_21650 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site RYU24_21650 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal RYU24_21650 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising RYU24_21650 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal RYU24_21660 IPR005828 Major facilitator, sugar transporter-like RYU24_21660 IPR036259 MFS transporter superfamily RYU24_21660 IPR020846 Major facilitator superfamily domain RYU24_21660 IPR005829 Sugar transporter, conserved site RYU24_21660 IPR004736 MFS transporter, metabolite:H symporter RYU24_21680 IPR004498 Ribosomal protein L11 methyltransferase RYU24_21680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_21690 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RYU24_21690 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RYU24_21690 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RYU24_21690 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RYU24_21690 IPR036291 NAD(P)-binding domain superfamily RYU24_21720 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RYU24_21720 IPR020843 Polyketide synthase, enoylreductase domain RYU24_21720 IPR042104 Polyketide synthase, dehydratase domain superfamily RYU24_21720 IPR009081 Phosphopantetheine binding ACP domain RYU24_21720 IPR013968 Polyketide synthase, ketoreductase domain RYU24_21720 IPR036291 NAD(P)-binding domain superfamily RYU24_21720 IPR020807 Polyketide synthase, dehydratase domain RYU24_21720 IPR001227 Acyl transferase domain superfamily RYU24_21720 IPR036736 ACP-like superfamily RYU24_21720 IPR014043 Acyl transferase RYU24_21720 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RYU24_21720 IPR006162 Phosphopantetheine attachment site RYU24_21720 IPR013154 Alcohol dehydrogenase, N-terminal RYU24_21720 IPR011032 GroES-like superfamily RYU24_21720 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RYU24_21750 IPR005746 Thioredoxin RYU24_21750 IPR036249 Thioredoxin-like superfamily RYU24_21750 IPR017937 Thioredoxin, conserved site RYU24_21750 IPR013766 Thioredoxin domain RYU24_21800 IPR002891 Adenylyl-sulfate kinase RYU24_21800 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain RYU24_21800 IPR031157 Tr-type G domain, conserved site RYU24_21800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_21800 IPR005225 Small GTP-binding protein domain RYU24_21800 IPR011779 Sulphate adenylyltransferase, large subunit RYU24_21800 IPR000795 Transcription factor, GTP-binding domain RYU24_21800 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_21800 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RYU24_21810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_21810 IPR011784 Sulphate adenylyltransferase, small subunit RYU24_21810 IPR002500 Phosphoadenosine phosphosulphate reductase RYU24_21840 IPR001107 Band 7 domain RYU24_21840 IPR036013 Band 7/SPFH domain superfamily RYU24_21840 IPR031905 Flotillin, C-terminal domain RYU24_21840 IPR027705 Flotillin family RYU24_21850 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RYU24_21850 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site RYU24_21850 IPR003781 CoA-binding RYU24_21850 IPR005810 Succinyl-CoA ligase, alpha subunit RYU24_21850 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RYU24_21850 IPR036291 NAD(P)-binding domain superfamily RYU24_21850 IPR016102 Succinyl-CoA synthetase-like RYU24_21860 IPR005809 Succinate--CoA synthetase, beta subunit RYU24_21860 IPR016102 Succinyl-CoA synthetase-like RYU24_21860 IPR013815 ATP-grasp fold, subdomain 1 RYU24_21860 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RYU24_21860 IPR011761 ATP-grasp fold RYU24_21860 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RYU24_21860 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RYU24_21870 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_21870 IPR023753 FAD/NAD(P)-binding domain RYU24_21870 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RYU24_21870 IPR006258 Dihydrolipoamide dehydrogenase RYU24_21870 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RYU24_21870 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RYU24_21870 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RYU24_21880 IPR004167 Peripheral subunit-binding domain RYU24_21880 IPR006255 Dihydrolipoamide succinyltransferase RYU24_21880 IPR011053 Single hybrid motif RYU24_21880 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RYU24_21880 IPR000089 Biotin/lipoyl attachment RYU24_21880 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RYU24_21880 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RYU24_21880 IPR036625 E3-binding domain superfamily RYU24_21890 IPR029061 Thiamin diphosphate-binding fold RYU24_21890 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain RYU24_21890 IPR011603 2-oxoglutarate dehydrogenase E1 component RYU24_21890 IPR001017 Dehydrogenase, E1 component RYU24_21890 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal RYU24_21890 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily RYU24_21890 IPR005475 Transketolase-like, pyrimidine-binding domain RYU24_21900 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RYU24_21900 IPR009051 Alpha-helical ferredoxin RYU24_21900 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RYU24_21900 IPR012675 Beta-grasp domain superfamily RYU24_21900 IPR036010 2Fe-2S ferredoxin-like superfamily RYU24_21900 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RYU24_21900 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RYU24_21900 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_21910 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RYU24_21910 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_21910 IPR011281 Succinate dehydrogenase, flavoprotein subunit RYU24_21910 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RYU24_21910 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RYU24_21910 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RYU24_21910 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RYU24_21910 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RYU24_21920 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit RYU24_21920 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RYU24_21920 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit RYU24_21930 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit RYU24_21930 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site RYU24_21930 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RYU24_21930 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit RYU24_21940 IPR010953 Citrate synthase, type I RYU24_21940 IPR024176 Citrate synthase, bacterial-type RYU24_21940 IPR019810 Citrate synthase active site RYU24_21940 IPR002020 Citrate synthase RYU24_21940 IPR036969 Citrate synthase superfamily RYU24_21940 IPR016142 Citrate synthase-like, large alpha subdomain RYU24_21940 IPR016143 Citrate synthase-like, small alpha subdomain RYU24_21960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_21960 IPR003694 NAD(+) synthetase RYU24_21960 IPR022310 NAD/GMP synthase RYU24_21960 IPR014445 Glutamine-dependent NAD(+) synthetase RYU24_21960 IPR000132 Nitrilase/cyanide hydratase, conserved site RYU24_21960 IPR003010 Carbon-nitrogen hydrolase RYU24_21960 IPR036526 Carbon-nitrogen hydrolase superfamily RYU24_21980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_21980 IPR006015 Universal stress protein A family RYU24_21980 IPR006016 UspA RYU24_21990 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_21990 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RYU24_21990 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RYU24_22000 IPR038770 Sodium/solute symporter superfamily RYU24_22000 IPR018422 Cation/H+ exchanger, CPA1 family RYU24_22000 IPR006153 Cation/H+ exchanger RYU24_22020 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RYU24_22030 IPR008526 Inner membrane protein YedI RYU24_22040 IPR002305 Aminoacyl-tRNA synthetase, class Ic RYU24_22040 IPR024109 Tryptophan-tRNA ligase, bacterial-type RYU24_22040 IPR002306 Tryptophan-tRNA ligase RYU24_22040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_22040 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_22070 IPR038636 Capsule assembly protein Wzi superfamily RYU24_22070 IPR026950 Capsule assembly protein Wzi RYU24_22080 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RYU24_22080 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_22080 IPR002313 Lysine-tRNA ligase, class II RYU24_22080 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RYU24_22080 IPR012340 Nucleic acid-binding, OB-fold RYU24_22080 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RYU24_22100 IPR005764 Adenine phosphoribosyl transferase RYU24_22100 IPR000836 Phosphoribosyltransferase domain RYU24_22100 IPR029057 Phosphoribosyltransferase-like RYU24_22110 IPR018527 Rubredoxin, iron-binding site RYU24_22110 IPR024922 Rubredoxin RYU24_22110 IPR024934 Rubredoxin-like domain RYU24_22110 IPR024935 Rubredoxin domain RYU24_22120 IPR023753 FAD/NAD(P)-binding domain RYU24_22120 IPR041364 Rubredoxin binding domain RYU24_22120 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_22130 IPR029058 Alpha/Beta hydrolase fold RYU24_22130 IPR000073 Alpha/beta hydrolase fold-1 RYU24_22140 IPR005119 LysR, substrate-binding RYU24_22140 IPR000847 Transcription regulator HTH, LysR RYU24_22140 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_22140 IPR036390 Winged helix DNA-binding domain superfamily RYU24_22160 IPR003414 Polyphosphate kinase RYU24_22160 IPR036832 Polyphosphate kinase N-terminal domain superfamily RYU24_22160 IPR024953 Polyphosphate kinase middle domain RYU24_22160 IPR036830 Polyphosphate kinase middle domain superfamily RYU24_22160 IPR025200 Polyphosphate kinase C-terminal domain 2 RYU24_22160 IPR025198 Polyphosphate kinase N-terminal domain RYU24_22160 IPR041108 Polyphosphate kinase, C-terminal domain 1 RYU24_22170 IPR001264 Glycosyl transferase, family 51 RYU24_22170 IPR023346 Lysozyme-like domain superfamily RYU24_22170 IPR011812 Biosynthetic peptidoglycan transglycosylase RYU24_22170 IPR036950 Penicillin binding protein transglycosylase domain RYU24_22180 IPR022764 Peptidase S54, rhomboid domain RYU24_22180 IPR035952 Rhomboid-like superfamily RYU24_22190 IPR038766 Membrane component of ABC transporter, predicted RYU24_22200 IPR003593 AAA+ ATPase domain RYU24_22200 IPR003439 ABC transporter-like RYU24_22200 IPR017871 ABC transporter, conserved site RYU24_22200 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_22210 IPR013830 SGNH hydrolase-type esterase domain RYU24_22210 IPR036514 SGNH hydrolase superfamily RYU24_22220 IPR036874 Carbonic anhydrase superfamily RYU24_22220 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site RYU24_22220 IPR001765 Carbonic anhydrase RYU24_22230 IPR029058 Alpha/Beta hydrolase fold RYU24_22230 IPR000073 Alpha/beta hydrolase fold-1 RYU24_22230 IPR000639 Epoxide hydrolase-like RYU24_22250 IPR010916 TonB box, conserved site RYU24_22250 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_22250 IPR012910 TonB-dependent receptor, plug domain RYU24_22250 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_22250 IPR039426 Vitamin B12 transporter BtuB-like RYU24_22250 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RYU24_22250 IPR010917 TonB-dependent receptor, conserved site RYU24_22260 IPR017726 Fe/S biogenesis protein NfuA RYU24_22260 IPR000361 FeS cluster biogenesis RYU24_22260 IPR034904 Fe-S cluster assembly domain superfamily RYU24_22260 IPR035903 HesB-like domain superfamily RYU24_22260 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal RYU24_22280 IPR002491 ABC transporter periplasmic binding domain RYU24_22280 IPR033870 FatB domain RYU24_22300 IPR001204 Phosphate transporter RYU24_22310 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RYU24_22310 IPR011822 Cobalamin-dependent methionine synthase RYU24_22310 IPR036594 Methionine synthase domain RYU24_22310 IPR036589 Homocysteine-binding domain superfamily RYU24_22310 IPR003726 Homocysteine-binding domain RYU24_22310 IPR011005 Dihydropteroate synthase-like RYU24_22310 IPR036724 Cobalamin-binding domain superfamily RYU24_22310 IPR006158 Cobalamin (vitamin B12)-binding domain RYU24_22310 IPR033706 Methionine synthase, B12-binding domain RYU24_22310 IPR000489 Pterin-binding domain RYU24_22310 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RYU24_22310 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily RYU24_22330 IPR025668 Transposase DDE domain RYU24_22350 IPR012337 Ribonuclease H-like superfamily RYU24_22350 IPR001584 Integrase, catalytic core RYU24_22350 IPR036397 Ribonuclease H superfamily RYU24_22350 IPR025948 HTH-like domain RYU24_22370 IPR007569 Protein of unknown function DUF559 RYU24_22370 IPR011335 Restriction endonuclease type II-like RYU24_22380 IPR004006 DhaK domain RYU24_22380 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 RYU24_22390 IPR015868 Glutaminase RYU24_22390 IPR002645 STAS domain RYU24_22390 IPR036513 STAS domain superfamily RYU24_22390 IPR012338 Beta-lactamase/transpeptidase-like RYU24_22400 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RYU24_22400 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_22400 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_22400 IPR036291 NAD(P)-binding domain superfamily RYU24_22420 IPR002300 Aminoacyl-tRNA synthetase, class Ia RYU24_22420 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RYU24_22420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_22420 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RYU24_22420 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RYU24_22420 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RYU24_22420 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_22420 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RYU24_22420 IPR033705 Valyl tRNA synthetase, anticodon-binding domain RYU24_22420 IPR002303 Valine-tRNA ligase RYU24_22420 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RYU24_22450 IPR025161 Putative transposase IS4/IS5 family RYU24_22480 IPR036398 Alpha carbonic anhydrase domain superfamily RYU24_22480 IPR023561 Carbonic anhydrase, alpha-class RYU24_22480 IPR018338 Carbonic anhydrase, alpha-class, conserved site RYU24_22480 IPR001148 Alpha carbonic anhydrase domain RYU24_22480 IPR041891 Carbonic anhydrase, prokaryotic-like RYU24_22490 IPR007353 Protein of unknown function DUF421 RYU24_22490 IPR023090 UPF0702, alpha/beta domain superfamily RYU24_22500 IPR023214 HAD superfamily RYU24_22500 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_22500 IPR037512 Phosphoglycolate phosphatase, prokaryotic RYU24_22500 IPR006439 HAD hydrolase, subfamily IA RYU24_22500 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RYU24_22500 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RYU24_22500 IPR036412 HAD-like superfamily RYU24_22540 IPR002641 Patatin-like phospholipase domain RYU24_22540 IPR001423 Lysophospholipase patatin, conserved site RYU24_22540 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RYU24_22560 IPR001107 Band 7 domain RYU24_22560 IPR001972 Stomatin family RYU24_22560 IPR018080 Band 7/stomatin-like, conserved site RYU24_22560 IPR036013 Band 7/SPFH domain superfamily RYU24_22570 IPR011851 Sodium/proline symporter RYU24_22570 IPR038377 Sodium/glucose symporter superfamily RYU24_22570 IPR001734 Sodium/solute symporter RYU24_22570 IPR018212 Sodium/solute symporter, conserved site RYU24_22580 IPR000092 Polyprenyl synthetase RYU24_22580 IPR033749 Polyprenyl synthetase, conserved site RYU24_22580 IPR008949 Isoprenoid synthase domain superfamily RYU24_22590 IPR012709 2-methyl-aconitate isomerase PrpF RYU24_22590 IPR007400 PrpF protein RYU24_22600 IPR004840 Amino acid permease, conserved site RYU24_22600 IPR004841 Amino acid permease/ SLC12A domain RYU24_22630 IPR023214 HAD superfamily RYU24_22630 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein RYU24_22630 IPR036412 HAD-like superfamily RYU24_22640 IPR002500 Phosphoadenosine phosphosulphate reductase RYU24_22640 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RYU24_22640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_22640 IPR011798 Adenosine 5'-phosphosulphate reductase RYU24_22650 IPR009721 O-acyltransferase WSD1, C-terminal RYU24_22650 IPR014292 Acyltransferase, WS/DGAT/MGAT RYU24_22650 IPR004255 O-acyltransferase, WSD1, N-terminal RYU24_22670 IPR022967 RNA-binding domain, S1 RYU24_22670 IPR012340 Nucleic acid-binding, OB-fold RYU24_22670 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RYU24_22670 IPR004659 Ribonuclease E/G RYU24_22670 IPR003029 S1 domain RYU24_22680 IPR029001 Inosine triphosphate pyrophosphatase-like RYU24_22680 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein RYU24_22690 IPR007227 Cell shape-determining protein MreD RYU24_22690 IPR026034 Cell shape-determining protein MreD, proteobacterial type RYU24_22700 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 RYU24_22700 IPR007221 Rod shape-determining protein MreC RYU24_22700 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 RYU24_22710 IPR004753 Cell shape determining protein MreB RYU24_22720 IPR003837 Glu-tRNAGln amidotransferase C subunit RYU24_22720 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C RYU24_22730 IPR020556 Amidase, conserved site RYU24_22730 IPR000120 Amidase RYU24_22730 IPR023631 Amidase signature domain RYU24_22730 IPR036928 Amidase signature (AS) superfamily RYU24_22730 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RYU24_22740 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 RYU24_22740 IPR018027 Asn/Gln amidotransferase RYU24_22740 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RYU24_22740 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RYU24_22740 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like RYU24_22740 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RYU24_22740 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RYU24_22740 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 RYU24_22740 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RYU24_22780 IPR000620 EamA domain RYU24_22800 IPR000718 Peptidase M13 RYU24_22800 IPR018497 Peptidase M13, C-terminal domain RYU24_22800 IPR042089 Peptidase M13, domain 2 RYU24_22800 IPR008753 Peptidase M13, N-terminal domain RYU24_22800 IPR024079 Metallopeptidase, catalytic domain superfamily RYU24_22810 IPR008753 Peptidase M13, N-terminal domain RYU24_22810 IPR024079 Metallopeptidase, catalytic domain superfamily RYU24_22810 IPR000718 Peptidase M13 RYU24_22810 IPR042089 Peptidase M13, domain 2 RYU24_22810 IPR018497 Peptidase M13, C-terminal domain RYU24_22830 IPR036640 ABC transporter type 1, transmembrane domain superfamily RYU24_22830 IPR009248 SbmA/BacA-like RYU24_22850 IPR023214 HAD superfamily RYU24_22850 IPR003337 Trehalose-phosphatase RYU24_22850 IPR006379 HAD-superfamily hydrolase, subfamily IIB RYU24_22850 IPR036412 HAD-like superfamily RYU24_22860 IPR001830 Glycosyl transferase, family 20 RYU24_22860 IPR012766 Alpha,alpha-trehalose-phosphate synthase RYU24_22870 IPR011701 Major facilitator superfamily RYU24_22870 IPR020846 Major facilitator superfamily domain RYU24_22870 IPR036259 MFS transporter superfamily RYU24_22890 IPR020944 Nodulation protein S, NodS RYU24_22890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_22890 IPR008715 SAM-dependent methyltransferase, NodS-related RYU24_22930 IPR029062 Class I glutamine amidotransferase-like RYU24_22930 IPR020835 Catalase superfamily RYU24_22930 IPR041399 Large catalase, C-terminal domain RYU24_22930 IPR010582 Catalase immune-responsive domain RYU24_22930 IPR024708 Catalase active site RYU24_22930 IPR037060 Catalase core domain superfamily RYU24_22930 IPR011614 Catalase core domain RYU24_22930 IPR024712 Catalase, mono-functional, haem-containing, clade 2 RYU24_22930 IPR018028 Catalase, mono-functional, haem-containing RYU24_22930 IPR002226 Catalase haem-binding site RYU24_22940 IPR008331 Ferritin/DPS protein domain RYU24_22940 IPR009078 Ferritin-like superfamily RYU24_22940 IPR012347 Ferritin-like RYU24_22940 IPR002177 DNA-binding protein Dps RYU24_22940 IPR023188 DNA-binding protein Dps, conserved site RYU24_22950 IPR001598 Transposase, IS30, conserved site RYU24_22950 IPR001584 Integrase, catalytic core RYU24_22950 IPR025246 Transposase IS30-like HTH domain RYU24_22950 IPR012337 Ribonuclease H-like superfamily RYU24_22950 IPR036397 Ribonuclease H superfamily RYU24_22960 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RYU24_22960 IPR029787 Nucleotide cyclase RYU24_22960 IPR000160 GGDEF domain RYU24_22970 IPR000160 GGDEF domain RYU24_22970 IPR035919 EAL domain superfamily RYU24_22970 IPR029787 Nucleotide cyclase RYU24_22970 IPR005330 MHYT domain RYU24_22970 IPR001633 EAL domain RYU24_22980 IPR005116 Transport-associated OB, type 1 RYU24_22980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_22980 IPR004606 Molybdenum-pterin binding RYU24_22980 IPR011868 Molybdate ABC transporter, ATP-binding protein RYU24_22980 IPR003593 AAA+ ATPase domain RYU24_22980 IPR015852 ABC transporter, molybdenum import, ModC RYU24_22980 IPR017871 ABC transporter, conserved site RYU24_22980 IPR003439 ABC transporter-like RYU24_22980 IPR008995 Molybdate/tungstate binding, C-terminal RYU24_22990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_22990 IPR035906 MetI-like superfamily RYU24_22990 IPR011867 Molybdate ABC transporter, permease protein RYU24_23000 IPR005950 Molybdate ABC transporter, substrate-binding protein RYU24_23010 IPR036135 MoeA, N-terminal and linker domain superfamily RYU24_23010 IPR036688 MoeA, C-terminal, domain IV superfamily RYU24_23010 IPR005111 MoeA, C-terminal, domain IV RYU24_23010 IPR005110 MoeA, N-terminal and linker domain RYU24_23010 IPR001453 MoaB/Mog domain RYU24_23010 IPR036425 MoaB/Mog-like domain superfamily RYU24_23010 IPR038987 Molybdopterin biosynthesis protein MoeA-like RYU24_23020 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RYU24_23020 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily RYU24_23020 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA RYU24_23020 IPR023045 Molybdenum cofactor biosynthesis C RYU24_23020 IPR036425 MoaB/Mog-like domain superfamily RYU24_23020 IPR001453 MoaB/Mog domain RYU24_23030 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily RYU24_23030 IPR003448 Molybdopterin biosynthesis MoaE RYU24_23050 IPR013785 Aldolase-type TIM barrel RYU24_23050 IPR006638 Elp3/MiaB/NifB RYU24_23050 IPR013483 Molybdenum cofactor biosynthesis protein A RYU24_23050 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RYU24_23050 IPR010505 Molybdenum cofactor synthesis C-terminal RYU24_23050 IPR007197 Radical SAM RYU24_23060 IPR013482 Molybdenum cofactor guanylyltransferase RYU24_23060 IPR029044 Nucleotide-diphospho-sugar transferases RYU24_23060 IPR025877 MobA-like NTP transferase RYU24_23070 IPR009010 Aspartate decarboxylase-like domain superfamily RYU24_23070 IPR007419 BFD-like [2Fe-2S]-binding domain RYU24_23070 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RYU24_23070 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain RYU24_23070 IPR006657 Molybdopterin dinucleotide-binding domain RYU24_23070 IPR006656 Molybdopterin oxidoreductase RYU24_23070 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RYU24_23070 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RYU24_23080 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal RYU24_23080 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RYU24_23080 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RYU24_23080 IPR017121 Nitrite reductase [NAD(P)H], large subunit RYU24_23080 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RYU24_23080 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RYU24_23080 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RYU24_23080 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RYU24_23080 IPR007419 BFD-like [2Fe-2S]-binding domain RYU24_23080 IPR023753 FAD/NAD(P)-binding domain RYU24_23080 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_23080 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RYU24_23090 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RYU24_23090 IPR017121 Nitrite reductase [NAD(P)H], large subunit RYU24_23090 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RYU24_23090 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RYU24_23090 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal RYU24_23090 IPR023753 FAD/NAD(P)-binding domain RYU24_23090 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RYU24_23090 IPR007419 BFD-like [2Fe-2S]-binding domain RYU24_23090 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RYU24_23090 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RYU24_23090 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_23100 IPR011701 Major facilitator superfamily RYU24_23100 IPR020846 Major facilitator superfamily domain RYU24_23100 IPR036259 MFS transporter superfamily RYU24_23100 IPR004737 Nitrate transporter RYU24_23130 IPR005956 4-hydroxyphenylpyruvate dioxygenase RYU24_23130 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal RYU24_23130 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal RYU24_23130 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RYU24_23130 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RYU24_23130 IPR037523 Vicinal oxygen chelate (VOC) domain RYU24_23140 IPR037523 Vicinal oxygen chelate (VOC) domain RYU24_23140 IPR005956 4-hydroxyphenylpyruvate dioxygenase RYU24_23140 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RYU24_23140 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RYU24_23140 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal RYU24_23140 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal RYU24_23150 IPR004840 Amino acid permease, conserved site RYU24_23150 IPR004841 Amino acid permease/ SLC12A domain RYU24_23160 IPR004839 Aminotransferase, class I/classII RYU24_23160 IPR000796 Aspartate/other aminotransferase RYU24_23160 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_23160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_23160 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RYU24_23160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_23190 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RYU24_23190 IPR040079 Glutathione Transferase family RYU24_23190 IPR004045 Glutathione S-transferase, N-terminal RYU24_23190 IPR004046 Glutathione S-transferase, C-terminal RYU24_23190 IPR005955 Glutathione S-transferases, class Zeta RYU24_23190 IPR034330 Glutathione S-transferases, class Zeta , C-terminal RYU24_23190 IPR034333 Glutathione S-transferases, class Zeta , N-terminal RYU24_23190 IPR036249 Thioredoxin-like superfamily RYU24_23190 IPR010987 Glutathione S-transferase, C-terminal-like RYU24_23210 IPR004163 Coenzyme A transferase binding site RYU24_23210 IPR037171 NagB/RpiA transferase-like RYU24_23210 IPR004165 Coenzyme A transferase family I RYU24_23210 IPR012792 3-oxoacid CoA-transferase, subunit A RYU24_23220 IPR037171 NagB/RpiA transferase-like RYU24_23220 IPR004164 Coenzyme A transferase active site RYU24_23220 IPR004165 Coenzyme A transferase family I RYU24_23220 IPR012791 3-oxoacid CoA-transferase, subunit B RYU24_23230 IPR000577 Carbohydrate kinase, FGGY RYU24_23230 IPR005999 Glycerol kinase RYU24_23230 IPR018484 Carbohydrate kinase, FGGY, N-terminal RYU24_23230 IPR018483 Carbohydrate kinase, FGGY, conserved site RYU24_23230 IPR018485 Carbohydrate kinase, FGGY, C-terminal RYU24_23240 IPR011701 Major facilitator superfamily RYU24_23240 IPR020846 Major facilitator superfamily domain RYU24_23240 IPR036259 MFS transporter superfamily RYU24_23240 IPR004638 Drug resistance transporter EmrB-like RYU24_23250 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RYU24_23250 IPR005694 Efflux pump membrane protein RYU24_23260 IPR006683 Thioesterase domain RYU24_23260 IPR003736 Phenylacetic acid degradation-related domain RYU24_23260 IPR029069 HotDog domain superfamily RYU24_23270 IPR013785 Aldolase-type TIM barrel RYU24_23270 IPR030656 Delta-aminolevulinic acid dehydratase, active site RYU24_23270 IPR001731 Delta-aminolevulinic acid dehydratase RYU24_23280 IPR012727 Glycine oxidase ThiO RYU24_23280 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_23280 IPR006076 FAD dependent oxidoreductase RYU24_23290 IPR010099 Epimerase family protein SDR39U1 RYU24_23290 IPR013549 Domain of unknown function DUF1731 RYU24_23290 IPR001509 NAD-dependent epimerase/dehydratase RYU24_23290 IPR036291 NAD(P)-binding domain superfamily RYU24_23330 IPR006390 Dihydropteroate synthase RYU24_23330 IPR011005 Dihydropteroate synthase-like RYU24_23330 IPR000489 Pterin-binding domain RYU24_23340 IPR005841 Alpha-D-phosphohexomutase superfamily RYU24_23340 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RYU24_23340 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RYU24_23340 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RYU24_23340 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RYU24_23340 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RYU24_23340 IPR006352 Phosphoglucosamine mutase, bacterial type RYU24_23340 IPR005843 Alpha-D-phosphohexomutase, C-terminal RYU24_23360 IPR036397 Ribonuclease H superfamily RYU24_23360 IPR012337 Ribonuclease H-like superfamily RYU24_23360 IPR001584 Integrase, catalytic core RYU24_23360 IPR032874 DDE domain RYU24_23380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23380 IPR005053 MobA/MobL protein RYU24_23380 IPR041533 Bartonella effector protein, BID domain RYU24_23380 IPR027351 (+) RNA virus helicase core domain RYU24_23380 IPR014136 Ti-type conjugative transfer relaxase TraA RYU24_23420 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase RYU24_23420 IPR011009 Protein kinase-like domain superfamily RYU24_23430 IPR011009 Protein kinase-like domain superfamily RYU24_23430 IPR002575 Aminoglycoside phosphotransferase RYU24_23430 IPR024165 Aminoglycoside 3-phosphotransferase RYU24_23470 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RYU24_23470 IPR029052 Metallo-dependent phosphatase-like RYU24_23470 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain RYU24_23470 IPR004593 Nuclease SbcCD subunit D RYU24_23470 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RYU24_23480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23500 IPR011078 Pyridoxal phosphate homeostasis protein RYU24_23500 IPR029066 PLP-binding barrel RYU24_23500 IPR001608 Alanine racemase, N-terminal RYU24_23510 IPR001482 Type II/IV secretion system protein RYU24_23510 IPR006321 Pilus retraction protein PilT RYU24_23510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23510 IPR003593 AAA+ ATPase domain RYU24_23520 IPR001482 Type II/IV secretion system protein RYU24_23520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23520 IPR006321 Pilus retraction protein PilT RYU24_23530 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_23530 IPR002481 Ferric-uptake regulator RYU24_23530 IPR036390 Winged helix DNA-binding domain superfamily RYU24_23540 IPR007450 Lipoprotein SmpA/OmlA RYU24_23540 IPR037873 BamE-like RYU24_23540 IPR026592 Outer membrane protein assembly factor BamE RYU24_23550 IPR037021 RnfH superfamily RYU24_23550 IPR005346 RnfH protein RYU24_23550 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RYU24_23570 IPR016131 Haemerythrin, iron-binding site RYU24_23570 IPR012312 Haemerythrin-like RYU24_23570 IPR023504 Bacteriohemerythrin-like protein RYU24_23570 IPR035938 Hemerythrin-like superfamily RYU24_23570 IPR012827 Haemerythrin, metal-binding domain RYU24_23580 IPR026869 Putative glutamine amidotransferase type 2 RYU24_23580 IPR029055 Nucleophile aminohydrolases, N-terminal RYU24_23580 IPR017932 Glutamine amidotransferase type 2 domain RYU24_23590 IPR001048 Aspartate/glutamate/uridylate kinase RYU24_23590 IPR037528 Acetylglutamate kinase ArgB RYU24_23590 IPR004662 Acetylglutamate kinase family RYU24_23590 IPR036393 Acetylglutamate kinase-like superfamily RYU24_23590 IPR041727 N-Acetyl-L-glutamate kinase, cyclic RYU24_23600 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RYU24_23600 IPR016066 Alpha-D-phosphohexomutase, conserved site RYU24_23600 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RYU24_23600 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RYU24_23600 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RYU24_23600 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RYU24_23600 IPR005843 Alpha-D-phosphohexomutase, C-terminal RYU24_23600 IPR005841 Alpha-D-phosphohexomutase superfamily RYU24_23610 IPR029054 dUTPase-like RYU24_23610 IPR033704 dUTPase, trimeric RYU24_23610 IPR036157 dUTPase-like superfamily RYU24_23610 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RYU24_23620 IPR013986 DExx box DNA helicase domain superfamily RYU24_23620 IPR014017 UvrD-like DNA helicase, C-terminal RYU24_23620 IPR000212 DNA helicase, UvrD/REP type RYU24_23620 IPR005752 ATP-dependent DNA helicase Rep RYU24_23620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23620 IPR014016 UvrD-like helicase, ATP-binding domain RYU24_23620 IPR034739 UvrD/AddA helicase, N-terminal RYU24_23630 IPR036737 OmpA-like domain superfamily RYU24_23630 IPR006690 Outer membrane protein, OmpA-like, conserved site RYU24_23630 IPR006665 OmpA-like domain RYU24_23630 IPR039567 Glycine zipper domain RYU24_23630 IPR006664 Outer membrane protein, bacterial RYU24_23640 IPR002123 Phospholipid/glycerol acyltransferase RYU24_23660 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RYU24_23660 IPR013033 Septum formation inhibitor MinC RYU24_23660 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily RYU24_23660 IPR005526 Septum formation inhibitor MinC, C-terminal RYU24_23670 IPR025501 ATP binding protein MinD RYU24_23670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23670 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RYU24_23670 IPR010223 ATP binding protein MinD, bacterial-type RYU24_23680 IPR036707 Cell division topological specificity factor MinE superfamily RYU24_23680 IPR005527 Cell division topological specificity factor MinE RYU24_23700 IPR025199 DNA translocase FtsK, 4TM region RYU24_23700 IPR041027 FtsK alpha domain RYU24_23700 IPR002543 FtsK domain RYU24_23700 IPR018541 FtsK gamma domain RYU24_23700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23700 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_23700 IPR036390 Winged helix DNA-binding domain superfamily RYU24_23710 IPR005982 Thioredoxin reductase RYU24_23710 IPR023753 FAD/NAD(P)-binding domain RYU24_23710 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RYU24_23710 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_23720 IPR016181 Acyl-CoA N-acyltransferase RYU24_23720 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase RYU24_23720 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal RYU24_23730 IPR030700 N-end rule aminoacyl transferase RYU24_23730 IPR016181 Acyl-CoA N-acyltransferase RYU24_23730 IPR017138 Aspartate/glutamate leucyltransferase RYU24_23730 IPR007471 N-end aminoacyl transferase, N-terminal RYU24_23730 IPR007472 N-end rule aminoacyl transferase, C-terminal RYU24_23740 IPR006464 N-acetyltransferase RimI/Ard1 RYU24_23740 IPR016181 Acyl-CoA N-acyltransferase RYU24_23740 IPR000182 GNAT domain RYU24_23760 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RYU24_23760 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain RYU24_23760 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RYU24_23760 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_23760 IPR004161 Translation elongation factor EFTu-like, domain 2 RYU24_23760 IPR005225 Small GTP-binding protein domain RYU24_23760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23760 IPR031157 Tr-type G domain, conserved site RYU24_23760 IPR033720 Elongation factor Tu, domain 2 RYU24_23760 IPR000795 Transcription factor, GTP-binding domain RYU24_23760 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RYU24_23770 IPR005517 Translation elongation factor EFG/EF2, domain IV RYU24_23770 IPR004540 Translation elongation factor EFG/EF2 RYU24_23770 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_23770 IPR000795 Transcription factor, GTP-binding domain RYU24_23770 IPR005225 Small GTP-binding protein domain RYU24_23770 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_23770 IPR031157 Tr-type G domain, conserved site RYU24_23770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_23770 IPR041095 Elongation Factor G, domain II RYU24_23770 IPR009022 Elongation factor G, domain III RYU24_23770 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_23770 IPR035649 EFG, domain V RYU24_23770 IPR000640 Elongation factor EFG, domain V-like RYU24_23770 IPR035647 EF-G domain III/V-like RYU24_23770 IPR004161 Translation elongation factor EFTu-like, domain 2 RYU24_23780 IPR036823 Ribosomal protein S7 domain superfamily RYU24_23780 IPR023798 Ribosomal protein S7 domain RYU24_23780 IPR005717 Ribosomal protein S7, bacterial/organellar-type RYU24_23780 IPR000235 Ribosomal protein S5/S7 RYU24_23780 IPR020606 Ribosomal protein S7, conserved site RYU24_23790 IPR012340 Nucleic acid-binding, OB-fold RYU24_23790 IPR005679 Ribosomal protein S12, bacterial-type RYU24_23790 IPR006032 Ribosomal protein S12/S23 RYU24_23810 IPR000794 Beta-ketoacyl synthase RYU24_23810 IPR018201 Beta-ketoacyl synthase, active site RYU24_23810 IPR014031 Beta-ketoacyl synthase, C-terminal RYU24_23810 IPR014030 Beta-ketoacyl synthase, N-terminal RYU24_23810 IPR016039 Thiolase-like RYU24_23810 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RYU24_23820 IPR005265 Protoporphyrinogen oxidase HemJ-like RYU24_23830 IPR004840 Amino acid permease, conserved site RYU24_23830 IPR004841 Amino acid permease/ SLC12A domain RYU24_23840 IPR035959 RutC-like superfamily RYU24_23840 IPR006175 YjgF/YER057c/UK114 family RYU24_23840 IPR035709 RutC family, YoaB-like RYU24_23840 IPR019897 RidA, conserved site RYU24_23850 IPR000821 Alanine racemase RYU24_23850 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RYU24_23850 IPR011079 Alanine racemase, C-terminal RYU24_23850 IPR001608 Alanine racemase, N-terminal RYU24_23850 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RYU24_23850 IPR029066 PLP-binding barrel RYU24_23860 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_23860 IPR023080 D-amino acid dehydrogenase DadA RYU24_23860 IPR006076 FAD dependent oxidoreductase RYU24_23870 IPR011991 ArsR-like helix-turn-helix domain RYU24_23870 IPR000485 AsnC-type HTH domain RYU24_23870 IPR011008 Dimeric alpha-beta barrel RYU24_23870 IPR019888 Transcription regulator AsnC-type RYU24_23870 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RYU24_23870 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RYU24_23870 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_23870 IPR036390 Winged helix DNA-binding domain superfamily RYU24_23880 IPR036779 LysM domain superfamily RYU24_23880 IPR018392 LysM domain RYU24_23880 IPR014004 Transport-associated and nodulation domain, bacteria RYU24_23880 IPR007055 BON domain RYU24_23890 IPR006162 Phosphopantetheine attachment site RYU24_23890 IPR036736 ACP-like superfamily RYU24_23890 IPR003231 Acyl carrier protein (ACP) RYU24_23890 IPR009081 Phosphopantetheine binding ACP domain RYU24_23900 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RYU24_23900 IPR036291 NAD(P)-binding domain superfamily RYU24_23900 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_23900 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_23910 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RYU24_23910 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RYU24_23910 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RYU24_23910 IPR014043 Acyl transferase RYU24_23910 IPR001227 Acyl transferase domain superfamily RYU24_23910 IPR024925 Malonyl CoA-acyl carrier protein transacylase RYU24_23920 IPR002677 Ribosomal protein L32p RYU24_23920 IPR011332 Zinc-binding ribosomal protein RYU24_23930 IPR003772 Large ribosomal RNA subunit accumulation protein YceD RYU24_23930 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria RYU24_23940 IPR007411 Elongation factor P hydroxylase RYU24_23950 IPR006070 YrdC-like domain RYU24_23950 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RYU24_23980 IPR003768 Segregation and condensation protein A RYU24_23990 IPR005234 Chromosome segregation/condensation protein ScpB RYU24_23990 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_23990 IPR036390 Winged helix DNA-binding domain superfamily RYU24_24000 IPR036986 RNA-binding S4 domain superfamily RYU24_24000 IPR002942 RNA-binding S4 domain RYU24_24000 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RYU24_24000 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_24000 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_24000 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain RYU24_24000 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RYU24_24010 IPR003593 AAA+ ATPase domain RYU24_24010 IPR003439 ABC transporter-like RYU24_24010 IPR017871 ABC transporter, conserved site RYU24_24010 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RYU24_24010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_24020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_24020 IPR035906 MetI-like superfamily RYU24_24020 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RYU24_24030 IPR035906 MetI-like superfamily RYU24_24030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_24040 IPR001567 Peptidase M3A/M3B catalytic domain RYU24_24040 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RYU24_24060 IPR000914 Solute-binding protein family 5 domain RYU24_24060 IPR023765 Solute-binding protein family 5, conserved site RYU24_24060 IPR039424 Solute-binding protein family 5 RYU24_24060 IPR030678 Peptide/nickel binding protein, MppA-type RYU24_24070 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RYU24_24070 IPR039426 Vitamin B12 transporter BtuB-like RYU24_24070 IPR010917 TonB-dependent receptor, conserved site RYU24_24070 IPR010916 TonB box, conserved site RYU24_24070 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_24070 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_24070 IPR010101 TonB-dependent vitamin B12 transporter BtuB RYU24_24070 IPR012910 TonB-dependent receptor, plug domain RYU24_24080 IPR037682 TonB, C-terminal RYU24_24080 IPR003538 Gram-negative bacterial TonB protein RYU24_24080 IPR006260 TonB/TolA, C-terminal RYU24_24090 IPR002898 MotA/TolQ/ExbB proton channel RYU24_24100 IPR003400 Biopolymer transport protein ExbD/TolR RYU24_24110 IPR003400 Biopolymer transport protein ExbD/TolR RYU24_24120 IPR009040 Ferritin-like diiron domain RYU24_24120 IPR009078 Ferritin-like superfamily RYU24_24120 IPR012347 Ferritin-like RYU24_24120 IPR008331 Ferritin/DPS protein domain RYU24_24120 IPR002024 Bacterioferritin RYU24_24130 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase RYU24_24130 IPR036291 NAD(P)-binding domain superfamily RYU24_24140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_24140 IPR016909 Ribosomal RNA large subunit methyltransferase F RYU24_24140 IPR010286 METTL16/RlmF family RYU24_24150 IPR001357 BRCT domain RYU24_24150 IPR036420 BRCT domain superfamily RYU24_24150 IPR041663 DisA/LigA, helix-hairpin-helix motif RYU24_24150 IPR018239 NAD-dependent DNA ligase, active site RYU24_24150 IPR033136 NAD-dependent DNA ligase, conserved site RYU24_24150 IPR001679 NAD-dependent DNA ligase RYU24_24150 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RYU24_24150 IPR013839 NAD-dependent DNA ligase, adenylation RYU24_24150 IPR013840 NAD-dependent DNA ligase, N-terminal RYU24_24150 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RYU24_24150 IPR012340 Nucleic acid-binding, OB-fold RYU24_24150 IPR004150 NAD-dependent DNA ligase, OB-fold RYU24_24150 IPR010994 RuvA domain 2-like RYU24_24170 IPR003395 RecF/RecN/SMC, N-terminal RYU24_24170 IPR024704 Structural maintenance of chromosomes protein RYU24_24170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_24170 IPR036277 SMCs flexible hinge superfamily RYU24_24170 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RYU24_24170 IPR010935 SMCs flexible hinge RYU24_24190 IPR002781 Transmembrane protein TauE-like RYU24_24200 IPR030855 Bifunctional ligase/repressor BirA RYU24_24200 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RYU24_24200 IPR004409 Biotin operon repressor, helix-turn-helix domain RYU24_24200 IPR003142 Biotin protein ligase, C-terminal RYU24_24200 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RYU24_24200 IPR013196 Helix-turn-helix, type 11 RYU24_24200 IPR008988 Transcriptional repressor, C-terminal RYU24_24200 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_24200 IPR036390 Winged helix DNA-binding domain superfamily RYU24_24210 IPR004619 Type III pantothenate kinase RYU24_24220 IPR010662 Putative hydrolase RBBP9/YdeN RYU24_24220 IPR029058 Alpha/Beta hydrolase fold RYU24_24240 IPR003593 AAA+ ATPase domain RYU24_24240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_24240 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily RYU24_24240 IPR013822 Signal recognition particle SRP54, helical bundle RYU24_24240 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RYU24_24240 IPR004780 Signal recognition particle protein RYU24_24240 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RYU24_24240 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RYU24_24240 IPR022941 Signal recognition particle, SRP54 subunit RYU24_24260 IPR036397 Ribonuclease H superfamily RYU24_24260 IPR012337 Ribonuclease H-like superfamily RYU24_24260 IPR001584 Integrase, catalytic core RYU24_24260 IPR025948 HTH-like domain RYU24_24280 IPR025774 SAM-dependent methyltransferase gTMT-type RYU24_24280 IPR013216 Methyltransferase type 11 RYU24_24280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_24290 IPR011004 Trimeric LpxA-like superfamily RYU24_24290 IPR001451 Hexapeptide repeat RYU24_24290 IPR023446 Carnitine operon protein CaiE RYU24_24300 IPR013225 PaaX-like, C-terminal RYU24_24300 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX RYU24_24300 IPR012906 PaaX-like, N-terminal RYU24_24300 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_24310 IPR028154 AMP-dependent ligase, C-terminal RYU24_24310 IPR000873 AMP-dependent synthetase/ligase RYU24_24310 IPR042099 AMP-dependent synthetase-like superfamily RYU24_24310 IPR011880 Phenylacetate-CoA ligase RYU24_24320 IPR002155 Thiolase RYU24_24320 IPR016039 Thiolase-like RYU24_24320 IPR020615 Thiolase, acyl-enzyme intermediate active site RYU24_24320 IPR020610 Thiolase, active site RYU24_24320 IPR020617 Thiolase, C-terminal RYU24_24320 IPR020613 Thiolase, conserved site RYU24_24320 IPR020616 Thiolase, N-terminal RYU24_24320 IPR012793 Beta-ketoadipyl CoA thiolase RYU24_24330 IPR029045 ClpP/crotonase-like domain superfamily RYU24_24330 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_24330 IPR014748 Enoyl-CoA hydratase, C-terminal RYU24_24330 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RYU24_24340 IPR012675 Beta-grasp domain superfamily RYU24_24340 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RYU24_24340 IPR017938 Riboflavin synthase-like beta-barrel RYU24_24340 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RYU24_24340 IPR001433 Oxidoreductase FAD/NAD(P)-binding RYU24_24340 IPR017927 FAD-binding domain, ferredoxin reductase-type RYU24_24340 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RYU24_24340 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RYU24_24340 IPR036010 2Fe-2S ferredoxin-like superfamily RYU24_24340 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RYU24_24340 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RYU24_24350 IPR034904 Fe-S cluster assembly domain superfamily RYU24_24350 IPR002744 MIP18 family-like RYU24_24350 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit RYU24_24360 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C RYU24_24360 IPR012347 Ferritin-like RYU24_24360 IPR009078 Ferritin-like superfamily RYU24_24360 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C RYU24_24370 IPR009359 Phenylacetic acid degradation B RYU24_24370 IPR038693 Phenylacetyl-CoA epoxidase, subunit B RYU24_24380 IPR012347 Ferritin-like RYU24_24380 IPR009078 Ferritin-like superfamily RYU24_24380 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A RYU24_24380 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C RYU24_24390 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_24390 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_24390 IPR015590 Aldehyde dehydrogenase domain RYU24_24390 IPR029069 HotDog domain superfamily RYU24_24390 IPR002539 MaoC-like dehydratase domain RYU24_24390 IPR011966 Phenylacetic acid degradation protein PaaN RYU24_24390 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_24400 IPR011701 Major facilitator superfamily RYU24_24400 IPR020846 Major facilitator superfamily domain RYU24_24400 IPR036259 MFS transporter superfamily RYU24_24410 IPR001269 tRNA-dihydrouridine synthase RYU24_24410 IPR013785 Aldolase-type TIM barrel RYU24_24410 IPR035587 DUS-like, FMN-binding domain RYU24_24410 IPR032886 tRNA-dihydrouridine(16) synthase RYU24_24410 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal RYU24_24410 IPR018517 tRNA-dihydrouridine synthase, conserved site RYU24_24420 IPR011528 Nuclease-related domain, NERD RYU24_24430 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RYU24_24430 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RYU24_24430 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RYU24_24430 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RYU24_24430 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RYU24_24430 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RYU24_24430 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_24440 IPR000390 Small multidrug resistance protein family RYU24_24450 IPR013785 Aldolase-type TIM barrel RYU24_24450 IPR000056 Ribulose-phosphate 3-epimerase-like RYU24_24450 IPR011060 Ribulose-phosphate binding barrel RYU24_24450 IPR026019 Ribulose-phosphate 3-epimerase RYU24_24480 IPR010295 Protein of unknown function DUF898 RYU24_24490 IPR029058 Alpha/Beta hydrolase fold RYU24_24490 IPR000801 Putative esterase RYU24_24490 IPR014186 S-formylglutathione hydrolase RYU24_24510 IPR007536 Ribosomal RNA small subunit methyltransferase J RYU24_24510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_24520 IPR003824 Undecaprenyl-diphosphatase UppP RYU24_24530 IPR000905 Gcp-like domain RYU24_24530 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB RYU24_24550 IPR000059 NUDIX hydrolase, NudL, conserved site RYU24_24550 IPR023735 Uncharacterised nudix hydrolase NudL RYU24_24550 IPR000086 NUDIX hydrolase domain RYU24_24550 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_24630 IPR005802 Aminodeoxychorismate synthase, component I RYU24_24630 IPR005801 ADC synthase RYU24_24630 IPR019999 Anthranilate synthase component I-like RYU24_24630 IPR006805 Anthranilate synthase component I, N-terminal RYU24_24630 IPR015890 Chorismate-utilising enzyme, C-terminal RYU24_24640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RYU24_24640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RYU24_24640 IPR015424 Pyridoxal phosphate-dependent transferase RYU24_24640 IPR004839 Aminotransferase, class I/classII RYU24_24640 IPR005861 Histidinol-phosphate aminotransferase family RYU24_24650 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_24650 IPR001692 Histidinol dehydrogenase, conserved site RYU24_24650 IPR022695 Histidinol dehydrogenase, monofunctional RYU24_24650 IPR012131 Histidinol dehydrogenase RYU24_24660 IPR018198 ATP phosphoribosyltransferase, conserved site RYU24_24660 IPR024893 ATP phosphoribosyltransferase HisG, short form RYU24_24660 IPR013820 ATP phosphoribosyltransferase, catalytic domain RYU24_24660 IPR001348 ATP phosphoribosyltransferase HisG RYU24_24670 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RYU24_24670 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RYU24_24670 IPR001986 Enolpyruvate transferase domain RYU24_24670 IPR036968 Enolpyruvate transferase domain superfamily RYU24_24680 IPR002634 BolA protein RYU24_24680 IPR036065 BolA-like superfamily RYU24_24690 IPR036567 Ribosome hibernation promotion factor-like RYU24_24690 IPR003489 Ribosome hibernation promoting factor/RaiA RYU24_24700 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily RYU24_24700 IPR000394 RNA polymerase sigma factor 54 RYU24_24700 IPR007046 RNA polymerase sigma factor 54, core-binding domain RYU24_24700 IPR007634 RNA polymerase sigma factor 54, DNA-binding RYU24_24710 IPR003473 Quinolinate synthetase A RYU24_24710 IPR036094 Quinolinate synthetase A superfamily RYU24_24710 IPR023513 Quinolinate synthase A, type 1 RYU24_24720 IPR002813 Arginine biosynthesis protein ArgJ RYU24_24720 IPR016117 ArgJ-like domain superfamily RYU24_24720 IPR042195 ArgJ beta chain, C-terminal domain RYU24_24740 IPR011130 SecA, preprotein cross-linking domain RYU24_24740 IPR011116 SecA Wing/Scaffold RYU24_24740 IPR000185 Protein translocase subunit SecA RYU24_24740 IPR036266 SecA, Wing/Scaffold superfamily RYU24_24740 IPR014018 SecA motor DEAD RYU24_24740 IPR004027 SEC-C motif RYU24_24740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_24740 IPR011115 SecA DEAD-like, N-terminal RYU24_24740 IPR036670 SecA, preprotein cross-linking domain superfamily RYU24_24740 IPR020937 SecA conserved site RYU24_24750 IPR019479 Peroxiredoxin, C-terminal RYU24_24750 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RYU24_24750 IPR024706 Peroxiredoxin, AhpC-type RYU24_24750 IPR022915 Peroxiredoxin, TDXH subfamily RYU24_24750 IPR036249 Thioredoxin-like superfamily RYU24_24750 IPR013766 Thioredoxin domain RYU24_24780 IPR013221 Mur ligase, central RYU24_24780 IPR036615 Mur ligase, C-terminal domain superfamily RYU24_24780 IPR004101 Mur ligase, C-terminal RYU24_24780 IPR036565 Mur-like, catalytic domain superfamily RYU24_24780 IPR018109 Folylpolyglutamate synthetase, conserved site RYU24_24780 IPR001645 Folylpolyglutamate synthetase RYU24_24790 IPR034733 Acetyl-CoA carboxylase RYU24_24790 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RYU24_24790 IPR029045 ClpP/crotonase-like domain superfamily RYU24_24790 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RYU24_24800 IPR018204 Tryptophan synthase, alpha chain, active site RYU24_24800 IPR011060 Ribulose-phosphate binding barrel RYU24_24800 IPR002028 Tryptophan synthase, alpha chain RYU24_24800 IPR013785 Aldolase-type TIM barrel RYU24_24850 IPR001926 Pyridoxal-phosphate dependent enzyme RYU24_24850 IPR006653 Tryptophan synthase, beta chain, conserved site RYU24_24850 IPR006654 Tryptophan synthase, beta chain RYU24_24850 IPR023026 Tryptophan synthase beta chain/beta chain-like RYU24_24850 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RYU24_24860 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) RYU24_24860 IPR013785 Aldolase-type TIM barrel RYU24_24860 IPR011060 Ribulose-phosphate binding barrel RYU24_24870 IPR010916 TonB box, conserved site RYU24_24870 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_24870 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_24870 IPR012910 TonB-dependent receptor, plug domain RYU24_24870 IPR010101 TonB-dependent vitamin B12 transporter BtuB RYU24_24870 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RYU24_24870 IPR039426 Vitamin B12 transporter BtuB-like RYU24_24870 IPR010917 TonB-dependent receptor, conserved site RYU24_24880 IPR016030 Cobalamin adenosyltransferase-like RYU24_24880 IPR036451 Cobalamin adenosyltransferase-like superfamily RYU24_24880 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RYU24_24890 IPR025161 Putative transposase IS4/IS5 family RYU24_24920 IPR003846 Protein adenylyltransferase SelO RYU24_24930 IPR038056 YjbR-like superfamily RYU24_24930 IPR007351 Uncharacterised protein YjbR RYU24_24950 IPR004841 Amino acid permease/ SLC12A domain RYU24_24950 IPR004840 Amino acid permease, conserved site RYU24_24970 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_24970 IPR011006 CheY-like superfamily RYU24_24970 IPR001867 OmpR/PhoB-type DNA-binding domain RYU24_24970 IPR001789 Signal transduction response regulator, receiver domain RYU24_24970 IPR039420 Transcriptional regulatory protein WalR-like RYU24_24970 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_24980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_24980 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_24980 IPR003660 HAMP domain RYU24_24980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_24980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_24980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_24980 IPR005467 Histidine kinase domain RYU24_25000 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_25000 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_25000 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_25000 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_25000 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RYU24_25000 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_25000 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_25010 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RYU24_25010 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_25010 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RYU24_25010 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RYU24_25010 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_25010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_25010 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_25030 IPR009315 Phosphate-starvation-induced PsiE RYU24_25030 IPR020948 Phosphate-starvation-induced PsiE-like RYU24_25070 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_25070 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_25070 IPR012910 TonB-dependent receptor, plug domain RYU24_25070 IPR039426 Vitamin B12 transporter BtuB-like RYU24_25090 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RYU24_25090 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_25090 IPR004524 Aspartate-tRNA ligase, type 1 RYU24_25090 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RYU24_25090 IPR004115 GAD-like domain superfamily RYU24_25090 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RYU24_25090 IPR012340 Nucleic acid-binding, OB-fold RYU24_25090 IPR029351 GAD domain RYU24_25170 IPR031357 Stealth protein CR3, conserved region 3 RYU24_25170 IPR021520 Stealth protein CR2, conserved region 2 RYU24_25170 IPR031358 Stealth protein CR1, conserved region 1 RYU24_25190 IPR033939 Branched-chain aminotransferase RYU24_25190 IPR018300 Aminotransferase, class IV, conserved site RYU24_25190 IPR036038 Aminotransferase-like, PLP-dependent enzymes RYU24_25190 IPR005785 Branched-chain amino acid aminotransferase I RYU24_25190 IPR001544 Aminotransferase class IV RYU24_25200 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RYU24_25200 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme RYU24_25200 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RYU24_25210 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_25210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_25210 IPR005467 Histidine kinase domain RYU24_25210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_25210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_25210 IPR000700 PAS-associated, C-terminal RYU24_25210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_25220 IPR023153 PSPTO4464-like domain superfamily RYU24_25220 IPR006839 Ribosome-associated, YjgA RYU24_25230 IPR000032 Phosphocarrier protein HPr-like RYU24_25230 IPR035895 HPr-like superfamily RYU24_25230 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RYU24_25230 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RYU24_25240 IPR005337 RapZ-like family RYU24_25240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_25250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_25250 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain RYU24_25250 IPR003721 Pantoate-beta-alanine ligase RYU24_25250 IPR004821 Cytidyltransferase-like domain RYU24_25260 IPR040442 Pyruvate kinase-like domain superfamily RYU24_25260 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_25260 IPR003700 Ketopantoate hydroxymethyltransferase RYU24_25270 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily RYU24_25270 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RYU24_25280 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RYU24_25280 IPR025866 Polymerase A arginine-rich C-terminal domain RYU24_25280 IPR010206 Poly(A) polymerase I RYU24_25280 IPR002646 Poly A polymerase, head domain RYU24_25290 IPR004509 Competence protein ComEA, helix-hairpin-helix domain RYU24_25290 IPR019554 Soluble ligand binding domain RYU24_25290 IPR010994 RuvA domain 2-like RYU24_25290 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RYU24_25290 IPR004787 Competence protein ComEA RYU24_25300 IPR011551 NTP pyrophosphohydrolase MazG RYU24_25300 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RYU24_25310 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_25310 IPR036291 NAD(P)-binding domain superfamily RYU24_25340 IPR021027 Transposase, putative, helix-turn-helix domain RYU24_25340 IPR010095 Transposase IS605, OrfB, C-terminal RYU24_25340 IPR001959 Probable transposase, IS891/IS1136/IS1341 RYU24_25350 IPR036515 Transposase IS200-like superfamily RYU24_25350 IPR002686 Transposase IS200-like RYU24_25400 IPR032859 GTPase Der, C-terminal KH-domain-like RYU24_25400 IPR006073 GTP binding domain RYU24_25400 IPR016484 GTP-binding protein EngA RYU24_25400 IPR031166 EngA-type guanine nucleotide-binding (G) domain RYU24_25400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_25400 IPR015946 K homology domain-like, alpha/beta RYU24_25400 IPR005225 Small GTP-binding protein domain RYU24_25410 IPR002372 Pyrrolo-quinoline quinone repeat RYU24_25410 IPR017687 Outer membrane protein assembly factor BamB RYU24_25410 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RYU24_25410 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RYU24_25410 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RYU24_25430 IPR006195 Aminoacyl-tRNA synthetase, class II RYU24_25430 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RYU24_25430 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain RYU24_25430 IPR015807 Histidine-tRNA ligase RYU24_25430 IPR036621 Anticodon-binding domain superfamily RYU24_25430 IPR004154 Anticodon-binding RYU24_25440 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RYU24_25440 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RYU24_25440 IPR011005 Dihydropteroate synthase-like RYU24_25450 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RYU24_25450 IPR025194 Domain of unknown function DUF4115 RYU24_25450 IPR001387 Cro/C1-type helix-turn-helix domain RYU24_25470 IPR027492 Dual-specificity RNA methyltransferase RlmN RYU24_25470 IPR040072 Methyltransferase (Class A) RYU24_25470 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RYU24_25470 IPR013785 Aldolase-type TIM barrel RYU24_25470 IPR007197 Radical SAM RYU24_25480 IPR023005 Nucleoside diphosphate kinase, active site RYU24_25480 IPR001564 Nucleoside diphosphate kinase RYU24_25480 IPR034907 Nucleoside diphosphate kinase-like domain RYU24_25480 IPR036850 Nucleoside diphosphate kinase-like domain superfamily RYU24_25490 IPR036762 IscX-like superfamily RYU24_25490 IPR007479 ISC system FeS cluster assembly, IscX RYU24_25500 IPR033879 Undecaprenyl-diphosphatase RYU24_25500 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RYU24_25500 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RYU24_25510 IPR013023 Ketol-acid reductoisomerase RYU24_25510 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_25510 IPR036291 NAD(P)-binding domain superfamily RYU24_25510 IPR013116 Ketol-acid reductoisomerase, N-terminal RYU24_25510 IPR000506 Ketol-acid reductoisomerase, C-terminal RYU24_25510 IPR014359 Ketol-acid reductoisomerase, prokaryotic RYU24_25520 IPR019455 Acetolactate synthase, small subunit, C-terminal RYU24_25520 IPR002912 ACT domain RYU24_25520 IPR039557 AHAS, ACT domain RYU24_25520 IPR004789 Acetolactate synthase, small subunit RYU24_25520 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal RYU24_25530 IPR012846 Acetolactate synthase, large subunit, biosynthetic RYU24_25530 IPR039368 Acetolactate synthase large subunit, TPP binding domain RYU24_25530 IPR029035 DHS-like NAD/FAD-binding domain superfamily RYU24_25530 IPR029061 Thiamin diphosphate-binding fold RYU24_25530 IPR012000 Thiamine pyrophosphate enzyme, central domain RYU24_25530 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RYU24_25530 IPR000399 TPP-binding enzyme, conserved site RYU24_25530 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RYU24_25550 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RYU24_25550 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RYU24_25550 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RYU24_25550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_25550 IPR015413 Methionyl/Leucyl tRNA synthetase RYU24_25550 IPR002302 Leucine-tRNA ligase RYU24_25550 IPR002300 Aminoacyl-tRNA synthetase, class Ia RYU24_25550 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_25550 IPR025709 Leucyl-tRNA synthetase, editing domain RYU24_25580 IPR023504 Bacteriohemerythrin-like protein RYU24_25580 IPR012312 Haemerythrin-like RYU24_25580 IPR016131 Haemerythrin, iron-binding site RYU24_25580 IPR035938 Hemerythrin-like superfamily RYU24_25580 IPR012827 Haemerythrin, metal-binding domain RYU24_25590 IPR006143 RND efflux pump, membrane fusion protein RYU24_25590 IPR030190 Macrolide export protein MacA RYU24_25590 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RYU24_25600 IPR003593 AAA+ ATPase domain RYU24_25600 IPR003838 ABC transporter permease protein domain RYU24_25600 IPR003439 ABC transporter-like RYU24_25600 IPR017871 ABC transporter, conserved site RYU24_25600 IPR017911 ABC transporter, macrolide export, ATP-binding domain RYU24_25600 IPR025857 MacB-like periplasmic core domain RYU24_25600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_25610 IPR003423 Outer membrane efflux protein RYU24_25610 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RYU24_25630 IPR035985 Ubiquitin-activating enzyme RYU24_25630 IPR000594 THIF-type NAD/FAD binding fold RYU24_25650 IPR013520 Exonuclease, RNase T/DNA polymerase III RYU24_25650 IPR022894 Oligoribonuclease RYU24_25650 IPR012337 Ribonuclease H-like superfamily RYU24_25650 IPR036397 Ribonuclease H superfamily RYU24_25660 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain RYU24_25660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_25660 IPR004881 Ribosome biogenesis GTPase RsgA RYU24_25660 IPR010914 RsgA GTPase domain RYU24_25680 IPR036249 Thioredoxin-like superfamily RYU24_25680 IPR011900 Glutaredoxin, GrxC RYU24_25680 IPR002109 Glutaredoxin RYU24_25680 IPR011767 Glutaredoxin active site RYU24_25680 IPR014025 Glutaredoxin subgroup RYU24_25690 IPR003708 Bacterial protein export chaperone SecB RYU24_25690 IPR035958 SecB-like superfamily RYU24_25710 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RYU24_25710 IPR036291 NAD(P)-binding domain superfamily RYU24_25710 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_25720 IPR001130 TatD family RYU24_25720 IPR018228 Deoxyribonuclease, TatD-related, conserved site RYU24_25720 IPR015991 Uncharacterised hydrolase TatD-type RYU24_25720 IPR032466 Metal-dependent hydrolase RYU24_25750 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_25750 IPR000795 Transcription factor, GTP-binding domain RYU24_25750 IPR005225 Small GTP-binding protein domain RYU24_25750 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily RYU24_25750 IPR041732 Peptide chain release factor 3, GTP-binding domain RYU24_25750 IPR004548 Peptide chain release factor 3 RYU24_25750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_25750 IPR031157 Tr-type G domain, conserved site RYU24_25750 IPR004161 Translation elongation factor EFTu-like, domain 2 RYU24_25750 IPR035647 EF-G domain III/V-like RYU24_25750 IPR032090 Peptide chain release factor 3, C-terminal RYU24_25780 IPR041027 FtsK alpha domain RYU24_25780 IPR002543 FtsK domain RYU24_25780 IPR018541 FtsK gamma domain RYU24_25780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_25780 IPR036390 Winged helix DNA-binding domain superfamily RYU24_25780 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_25800 IPR025758 Fic/DOC N-terminal RYU24_25800 IPR003812 Fido domain RYU24_25800 IPR036597 Fido-like domain superfamily RYU24_25800 IPR040198 Fido domain-containing protein RYU24_25800 IPR026287 Protein adenylyltransferase SoFic-like RYU24_25820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_25820 IPR006935 Helicase/UvrB, N-terminal RYU24_25820 IPR014883 VRR-NUC domain RYU24_25830 IPR041405 Type III R-M EcoP15I, C-terminal RYU24_25830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_25830 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class RYU24_25830 IPR002941 DNA methylase N-4/N-6 RYU24_25830 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RYU24_25840 IPR025668 Transposase DDE domain RYU24_25850 IPR006043 Xanthine/uracil/vitamin C permease RYU24_25850 IPR006042 Xanthine/uracil permease RYU24_25850 IPR017588 Uric acid permease UacT-like RYU24_25860 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like RYU24_25860 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily RYU24_25860 IPR003055 Nucleoside-specific channel-forming protein Tsx RYU24_25890 IPR005119 LysR, substrate-binding RYU24_25890 IPR000847 Transcription regulator HTH, LysR RYU24_25890 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_25890 IPR036390 Winged helix DNA-binding domain superfamily RYU24_25890 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain RYU24_25900 IPR003760 ABC transporter substrate-binding protein PnrA-like RYU24_25910 IPR003760 ABC transporter substrate-binding protein PnrA-like RYU24_25930 IPR026992 Non-haem dioxygenase N-terminal domain RYU24_25930 IPR027443 Isopenicillin N synthase-like RYU24_25930 IPR005123 Oxoglutarate/iron-dependent dioxygenase RYU24_25950 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RYU24_25950 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RYU24_25950 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RYU24_25960 IPR025668 Transposase DDE domain RYU24_26120 IPR029787 Nucleotide cyclase RYU24_26120 IPR005330 MHYT domain RYU24_26120 IPR000160 GGDEF domain RYU24_26120 IPR035919 EAL domain superfamily RYU24_26120 IPR001633 EAL domain RYU24_26130 IPR036034 PDZ superfamily RYU24_26130 IPR005151 Tail specific protease RYU24_26130 IPR020992 Tail specific protease, C-terminal RYU24_26130 IPR040573 Tail specific protease, N-terminal domain RYU24_26130 IPR001478 PDZ domain RYU24_26130 IPR029045 ClpP/crotonase-like domain superfamily RYU24_26130 IPR004447 C-terminal-processing peptidase S41A RYU24_26140 IPR022956 Beta-hexosaminidase, bacterial RYU24_26140 IPR019800 Glycoside hydrolase, family 3, active site RYU24_26140 IPR001764 Glycoside hydrolase, family 3, N-terminal RYU24_26140 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RYU24_26140 IPR017853 Glycoside hydrolase superfamily RYU24_26170 IPR000965 GPR domain RYU24_26170 IPR012134 Glutamate-5-semialdehyde dehydrogenase RYU24_26170 IPR015590 Aldehyde dehydrogenase domain RYU24_26170 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_26170 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_26170 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RYU24_26170 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_26180 IPR004372 Acetate/propionate kinase RYU24_26180 IPR000890 Aliphatic acid kinase, short-chain RYU24_26180 IPR023865 Aliphatic acid kinase, short-chain, conserved site RYU24_26190 IPR016475 Phosphate acetyltransferase, bacteria RYU24_26190 IPR002505 Phosphate acetyl/butaryl transferase RYU24_26190 IPR042112 Phosphate acetyltransferase, domain 2 RYU24_26190 IPR042113 Phosphate acetyltransferase, domain 1 RYU24_26190 IPR004614 Phosphate acetyltransferase RYU24_26190 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily RYU24_26190 IPR010766 DRTGG RYU24_26190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_26210 IPR011167 Iron-dependent fumarate hydratase RYU24_26210 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain RYU24_26210 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain RYU24_26210 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily RYU24_26210 IPR020557 Fumarate lyase, conserved site RYU24_26230 IPR003959 ATPase, AAA-type, core RYU24_26230 IPR019489 Clp ATPase, C-terminal RYU24_26230 IPR004487 Clp protease, ATP-binding subunit ClpX RYU24_26230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_26230 IPR010603 Zinc finger, ClpX C4-type RYU24_26230 IPR038366 Zinc finger, ClpX C4-type superfamily RYU24_26230 IPR003593 AAA+ ATPase domain RYU24_26240 IPR029045 ClpP/crotonase-like domain superfamily RYU24_26240 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RYU24_26240 IPR033135 ClpP, histidine active site RYU24_26240 IPR018215 ClpP, Ser active site RYU24_26240 IPR001907 ATP-dependent Clp protease proteolytic subunit RYU24_26250 IPR037041 Trigger factor, C-terminal domain superfamily RYU24_26250 IPR036611 Trigger factor ribosome-binding domain superfamily RYU24_26250 IPR005215 Trigger factor RYU24_26250 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RYU24_26250 IPR008880 Trigger factor, C-terminal RYU24_26250 IPR008881 Trigger factor, ribosome-binding, bacterial RYU24_26250 IPR027304 Trigger factor/SurA domain superfamily RYU24_26260 IPR039423 TonB-dependent receptor-like RYU24_26260 IPR000531 TonB-dependent receptor-like, beta-barrel RYU24_26260 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RYU24_26260 IPR012910 TonB-dependent receptor, plug domain RYU24_26260 IPR030148 Catecholate siderophore receptor Fiu RYU24_26260 IPR037066 TonB-dependent receptor, plug domain superfamily RYU24_26260 IPR010105 TonB-dependent siderophore receptor RYU24_26270 IPR005123 Oxoglutarate/iron-dependent dioxygenase RYU24_26270 IPR041097 PKHD-type hydroxylase C-terminal domain RYU24_26270 IPR023550 PKHD-type hydroxylase RYU24_26270 IPR006620 Prolyl 4-hydroxylase, alpha subunit RYU24_26280 IPR000891 Pyruvate carboxyltransferase RYU24_26280 IPR039371 LeuA, N-terminal catalytic TIM barrel domain RYU24_26280 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily RYU24_26280 IPR005668 2-isopropylmalate synthase RYU24_26280 IPR013785 Aldolase-type TIM barrel RYU24_26280 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RYU24_26280 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RYU24_26290 IPR029058 Alpha/Beta hydrolase fold RYU24_26290 IPR000073 Alpha/beta hydrolase fold-1 RYU24_26290 IPR008220 Homoserine/serine acetyltransferase MetX-like RYU24_26300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_26300 IPR010743 Methionine biosynthesis MetW RYU24_26300 IPR029058 Alpha/Beta hydrolase fold RYU24_26300 IPR000073 Alpha/beta hydrolase fold-1 RYU24_26300 IPR008220 Homoserine/serine acetyltransferase MetX-like RYU24_26330 IPR002637 Ham1-like protein RYU24_26330 IPR020922 dITP/XTP pyrophosphatase RYU24_26330 IPR029001 Inosine triphosphate pyrophosphatase-like RYU24_26360 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt RYU24_26400 IPR022271 Lipocalin, ApoD type RYU24_26400 IPR002446 Lipocalin, bacterial RYU24_26400 IPR012674 Calycin RYU24_26400 IPR000566 Lipocalin/cytosolic fatty-acid binding domain RYU24_26400 IPR022272 Lipocalin family conserved site RYU24_26410 IPR000398 Thymidylate synthase RYU24_26410 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily RYU24_26410 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RYU24_26410 IPR020940 Thymidylate synthase, active site RYU24_26420 IPR012259 Dihydrofolate reductase RYU24_26420 IPR024072 Dihydrofolate reductase-like domain superfamily RYU24_26420 IPR017925 Dihydrofolate reductase conserved site RYU24_26420 IPR001796 Dihydrofolate reductase domain RYU24_26450 IPR002569 Peptide methionine sulphoxide reductase MsrA RYU24_26450 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily RYU24_26470 IPR002898 MotA/TolQ/ExbB proton channel RYU24_26490 IPR004810 Formyltetrahydrofolate deformylase RYU24_26490 IPR002912 ACT domain RYU24_26490 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain RYU24_26490 IPR002376 Formyl transferase, N-terminal RYU24_26490 IPR036477 Formyl transferase, N-terminal domain superfamily RYU24_26500 IPR009057 Homeobox-like domain superfamily RYU24_26500 IPR001647 DNA-binding HTH domain, TetR-type RYU24_26500 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RYU24_26500 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RYU24_26500 IPR013571 Transcription regulator QacR, C-terminal RYU24_26510 IPR016161 Aldehyde/histidinol dehydrogenase RYU24_26510 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RYU24_26510 IPR015590 Aldehyde dehydrogenase domain RYU24_26510 IPR016162 Aldehyde dehydrogenase, N-terminal RYU24_26510 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RYU24_26510 IPR016163 Aldehyde dehydrogenase, C-terminal RYU24_26520 IPR001383 Ribosomal protein L28 RYU24_26520 IPR037147 Ribosomal protein L28/L24 superfamily RYU24_26520 IPR026569 Ribosomal protein L28/L24 RYU24_26520 IPR034704 L28p-like RYU24_26530 IPR038584 Ribosomal protein L33 superfamily RYU24_26530 IPR001705 Ribosomal protein L33 RYU24_26530 IPR011332 Zinc-binding ribosomal protein RYU24_26530 IPR018264 Ribosomal protein L33, conserved site RYU24_26540 IPR006153 Cation/H+ exchanger RYU24_26540 IPR004771 K+/H+ exchanger RYU24_26540 IPR038770 Sodium/solute symporter superfamily RYU24_26540 IPR036291 NAD(P)-binding domain superfamily RYU24_26540 IPR003148 Regulator of K+ conductance, N-terminal RYU24_26570 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RYU24_26570 IPR035979 RNA-binding domain superfamily RYU24_26570 IPR000504 RNA recognition motif domain RYU24_26580 IPR034739 UvrD/AddA helicase, N-terminal RYU24_26580 IPR014016 UvrD-like helicase, ATP-binding domain RYU24_26580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_26580 IPR014017 UvrD-like DNA helicase, C-terminal RYU24_26580 IPR013986 DExx box DNA helicase domain superfamily RYU24_26580 IPR005751 ATP-dependent DNA helicase PcrA RYU24_26580 IPR000212 DNA helicase, UvrD/REP type RYU24_26590 IPR018193 Glycerate kinase, flavodoxin-like fold RYU24_26590 IPR004381 Glycerate kinase RYU24_26590 IPR018197 Glycerate kinase, restriction-enzyme-like fold RYU24_26590 IPR036129 Glycerate kinase superfamily RYU24_26630 IPR013498 DNA topoisomerase, type IA, zn finger RYU24_26630 IPR034149 DNA topoisomerase 1, TOPRIM domain RYU24_26630 IPR028612 DNA topoisomerase I, type IA RYU24_26630 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type RYU24_26630 IPR005733 DNA topoisomerase I, bacterial-type RYU24_26630 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RYU24_26630 IPR006171 TOPRIM domain RYU24_26630 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RYU24_26630 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RYU24_26630 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RYU24_26630 IPR013497 DNA topoisomerase, type IA, central RYU24_26630 IPR023406 DNA topoisomerase, type IA, active site RYU24_26630 IPR003601 DNA topoisomerase, type IA, domain 2 RYU24_26630 IPR000380 DNA topoisomerase, type IA RYU24_26630 IPR023405 DNA topoisomerase, type IA, core domain RYU24_26670 IPR007236 SlyX RYU24_26680 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RYU24_26680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_26680 IPR032524 ABC transporter Uup, C-terminal RYU24_26680 IPR003439 ABC transporter-like RYU24_26680 IPR032781 ABC-transporter extension domain RYU24_26680 IPR017871 ABC transporter, conserved site RYU24_26680 IPR003593 AAA+ ATPase domain RYU24_26690 IPR004960 Bacterial lipid A biosynthesis acyltransferase RYU24_26690 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase RYU24_26690 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP RYU24_26720 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RYU24_26720 IPR000534 Semialdehyde dehydrogenase, NAD-binding RYU24_26720 IPR012080 Aspartate-semialdehyde dehydrogenase RYU24_26720 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type RYU24_26720 IPR036291 NAD(P)-binding domain superfamily RYU24_26720 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RYU24_26760 IPR020095 Pseudouridine synthase I, TruA, C-terminal RYU24_26760 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RYU24_26760 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_26760 IPR001406 Pseudouridine synthase I, TruA RYU24_26780 IPR012340 Nucleic acid-binding, OB-fold RYU24_26780 IPR006196 RNA-binding domain, S1, IF1 type RYU24_26780 IPR022967 RNA-binding domain, S1 RYU24_26780 IPR004368 Translation initiation factor IF-1 RYU24_26820 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RYU24_26820 IPR024084 Isopropylmalate dehydrogenase-like domain RYU24_26820 IPR004429 Isopropylmalate dehydrogenase RYU24_26840 IPR004431 3-isopropylmalate dehydratase, small subunit RYU24_26840 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RYU24_26840 IPR033940 3-isopropylmalate dehydratase, swivel domain RYU24_26840 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RYU24_26850 IPR036008 Aconitase, iron-sulfur domain RYU24_26850 IPR004430 3-isopropylmalate dehydratase, large subunit RYU24_26850 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RYU24_26850 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RYU24_26850 IPR018136 Aconitase family, 4Fe-4S cluster binding site RYU24_26850 IPR033941 3-Isopropylmalate dehydratase, catalytic domain RYU24_26870 IPR036390 Winged helix DNA-binding domain superfamily RYU24_26870 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_26870 IPR000847 Transcription regulator HTH, LysR RYU24_26870 IPR005119 LysR, substrate-binding RYU24_26910 IPR015797 NUDIX hydrolase-like domain superfamily RYU24_26910 IPR020084 NUDIX hydrolase, conserved site RYU24_26910 IPR000086 NUDIX hydrolase domain RYU24_26910 IPR022927 RNA pyrophosphohydrolase RppH RYU24_26910 IPR020476 NUDIX hydrolase RYU24_26920 IPR000121 PEP-utilising enzyme, C-terminal RYU24_26920 IPR018274 PEP-utilising enzyme, active site RYU24_26920 IPR008279 PEP-utilising enzyme, mobile domain RYU24_26920 IPR029016 GAF-like domain superfamily RYU24_26920 IPR003018 GAF domain RYU24_26920 IPR006318 Phosphotransferase system, enzyme I-like RYU24_26920 IPR008731 Phosphotransferase system, enzyme I N-terminal RYU24_26920 IPR036618 PtsI, HPr-binding domain superfamily RYU24_26920 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RYU24_26920 IPR040442 Pyruvate kinase-like domain superfamily RYU24_26920 IPR023151 PEP-utilising enzyme, conserved site RYU24_26920 IPR036637 Phosphohistidine domain superfamily RYU24_26950 IPR020835 Catalase superfamily RYU24_26950 IPR018028 Catalase, mono-functional, haem-containing RYU24_26950 IPR040333 Catalase, clade 3 RYU24_26950 IPR024708 Catalase active site RYU24_26950 IPR002226 Catalase haem-binding site RYU24_26950 IPR037060 Catalase core domain superfamily RYU24_26950 IPR011614 Catalase core domain RYU24_26950 IPR010582 Catalase immune-responsive domain RYU24_26950 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RYU24_26960 IPR000763 Catalase-peroxidase haem RYU24_26960 IPR002016 Haem peroxidase RYU24_26960 IPR010255 Haem peroxidase superfamily RYU24_26960 IPR019794 Peroxidase, active site RYU24_26970 IPR019794 Peroxidase, active site RYU24_26970 IPR010255 Haem peroxidase superfamily RYU24_26970 IPR002016 Haem peroxidase RYU24_26970 IPR000763 Catalase-peroxidase haem RYU24_27000 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_27000 IPR001279 Metallo-beta-lactamase RYU24_27000 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D RYU24_27010 IPR002524 Cation efflux protein RYU24_27010 IPR027470 Cation efflux protein, cytoplasmic domain RYU24_27010 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RYU24_27010 IPR027469 Cation efflux transmembrane domain superfamily RYU24_27020 IPR000182 GNAT domain RYU24_27020 IPR016181 Acyl-CoA N-acyltransferase RYU24_27020 IPR005019 Methyladenine glycosylase RYU24_27020 IPR029062 Class I glutamine amidotransferase-like RYU24_27020 IPR011257 DNA glycosylase RYU24_27020 IPR017926 Glutamine amidotransferase RYU24_27020 IPR001674 GMP synthase, C-terminal RYU24_27020 IPR025777 GMP synthetase ATP pyrophosphatase domain RYU24_27020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_27040 IPR028202 Reductase, C-terminal RYU24_27040 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit RYU24_27040 IPR023753 FAD/NAD(P)-binding domain RYU24_27040 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_27040 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RYU24_27050 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase RYU24_27050 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RYU24_27060 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_27060 IPR036291 NAD(P)-binding domain superfamily RYU24_27060 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_27060 IPR023643 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase HcaB RYU24_27070 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit RYU24_27070 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RYU24_27070 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RYU24_27080 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit RYU24_27080 IPR032710 NTF2-like domain superfamily RYU24_27080 IPR000391 Ring-hydroxylating dioxygenase beta subunit RYU24_27090 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RYU24_27090 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RYU24_27090 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RYU24_27090 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RYU24_27090 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit RYU24_27090 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RYU24_27100 IPR000847 Transcription regulator HTH, LysR RYU24_27100 IPR036390 Winged helix DNA-binding domain superfamily RYU24_27100 IPR005119 LysR, substrate-binding RYU24_27100 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_27110 IPR000073 Alpha/beta hydrolase fold-1 RYU24_27110 IPR029058 Alpha/Beta hydrolase fold RYU24_27120 IPR005318 Outer membrane porin, bacterial RYU24_27120 IPR023614 Porin domain superfamily RYU24_27140 IPR027805 Transposase, Helix-turn-helix domain RYU24_27140 IPR027806 Harbinger transposase-derived nuclease domain RYU24_27150 IPR017629 4-hydroxy-2-oxovalerate aldolase RYU24_27150 IPR013785 Aldolase-type TIM barrel RYU24_27150 IPR012425 DmpG-like communication RYU24_27150 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain RYU24_27150 IPR000891 Pyruvate carboxyltransferase RYU24_27160 IPR003361 Acetaldehyde dehydrogenase RYU24_27160 IPR015426 Acetaldehyde dehydrogenase, C-terminal RYU24_27160 IPR036291 NAD(P)-binding domain superfamily RYU24_27160 IPR000534 Semialdehyde dehydrogenase, NAD-binding RYU24_27170 IPR011234 Fumarylacetoacetase-like, C-terminal RYU24_27170 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RYU24_27170 IPR023793 2-keto-4-pentenoate hydratase RYU24_27180 IPR037512 Phosphoglycolate phosphatase, prokaryotic RYU24_27180 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RYU24_27180 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RYU24_27180 IPR023214 HAD superfamily RYU24_27180 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RYU24_27180 IPR006439 HAD hydrolase, subfamily IA RYU24_27180 IPR036412 HAD-like superfamily RYU24_27180 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_27190 IPR006145 Pseudouridine synthase, RsuA/RluA RYU24_27190 IPR020103 Pseudouridine synthase, catalytic domain superfamily RYU24_27190 IPR006225 Pseudouridine synthase, RluC/RluD RYU24_27190 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RYU24_27190 IPR036986 RNA-binding S4 domain superfamily RYU24_27190 IPR002942 RNA-binding S4 domain RYU24_27200 IPR012340 Nucleic acid-binding, OB-fold RYU24_27200 IPR021968 Polyribonucleotide phosphorylase C-terminal RYU24_27200 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RYU24_27200 IPR028878 Ribonuclease E RYU24_27200 IPR004659 Ribonuclease E/G RYU24_27200 IPR022967 RNA-binding domain, S1 RYU24_27200 IPR003029 S1 domain RYU24_27210 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 RYU24_27210 IPR042099 AMP-dependent synthetase-like superfamily RYU24_27210 IPR000873 AMP-dependent synthetase/ligase RYU24_27210 IPR020845 AMP-binding, conserved site RYU24_27210 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_27230 IPR007168 Phage shock protein, PspC, N-terminal RYU24_27250 IPR031312 Sodium/sulphate symporter, conserved site RYU24_27250 IPR001898 Solute carrier family 13 RYU24_27260 IPR000644 CBS domain RYU24_27260 IPR038763 DHH phosphoesterase superfamily RYU24_27260 IPR002646 Poly A polymerase, head domain RYU24_27280 IPR002310 Glycine-tRNA ligase, alpha subunit RYU24_27280 IPR006194 Glycine-tRNA synthetase, heterodimeric RYU24_27290 IPR006194 Glycine-tRNA synthetase, heterodimeric RYU24_27290 IPR015944 Glycine-tRNA ligase, beta subunit RYU24_27290 IPR008909 DALR anticodon binding RYU24_27340 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RYU24_27340 IPR036291 NAD(P)-binding domain superfamily RYU24_27340 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RYU24_27340 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RYU24_27340 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RYU24_27370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_27370 IPR013216 Methyltransferase type 11 RYU24_27390 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_27390 IPR011774 Geranylgeranyl reductase, plant/cyanobacteria RYU24_27390 IPR002938 FAD-binding domain RYU24_27390 IPR011777 Geranylgeranyl reductase family RYU24_27390 IPR010253 Geranylgeranyl reductase, plant/prokaryotic RYU24_27410 IPR005584 DNA gyrase inhibitor YacG RYU24_27410 IPR013088 Zinc finger, NHR/GATA-type RYU24_27430 IPR001279 Metallo-beta-lactamase RYU24_27430 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_27440 IPR001015 Ferrochelatase RYU24_27440 IPR019772 Ferrochelatase, active site RYU24_27440 IPR033644 Ferrochelatase, C-terminal RYU24_27440 IPR033659 Ferrochelatase, N-terminal RYU24_27460 IPR033134 Asp/Glu racemase, active site 2 RYU24_27460 IPR004391 Glutamate racemase RYU24_27460 IPR001920 Asp/Glu racemase RYU24_27460 IPR018187 Asp/Glu racemase, active site 1 RYU24_27460 IPR015942 Asp/Glu/hydantoin racemase RYU24_27480 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RYU24_27480 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase RYU24_27480 IPR036188 FAD/NAD(P)-binding domain superfamily RYU24_27510 IPR037026 Vgr protein, OB-fold domain superfamily RYU24_27510 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RYU24_27510 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RYU24_27510 IPR006531 Gp5 N-terminal RYU24_27510 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RYU24_27510 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RYU24_27520 IPR022931 Sulfur carrier protein TusA RYU24_27520 IPR001455 TusA-like domain RYU24_27520 IPR036868 TusA-like domain superfamily RYU24_27530 IPR005170 Transporter-associated domain RYU24_27530 IPR000644 CBS domain RYU24_27530 IPR036318 FAD-binding, type PCMH-like superfamily RYU24_27530 IPR016169 FAD-binding, type PCMH, subdomain 2 RYU24_27540 IPR003010 Carbon-nitrogen hydrolase RYU24_27540 IPR036526 Carbon-nitrogen hydrolase superfamily RYU24_27540 IPR004563 Apolipoprotein N-acyltransferase RYU24_27560 IPR000983 Bacterial general secretion pathway protein G-type pilin RYU24_27560 IPR012902 Prokaryotic N-terminal methylation site RYU24_27560 IPR013545 Type II secretion system protein G RYU24_27560 IPR010054 General secretion pathway protein G RYU24_27570 IPR003004 GspF/PilC family RYU24_27570 IPR001992 Type II secretion system conserved site RYU24_27570 IPR018076 Type II secretion system F domain RYU24_27570 IPR011850 General secretion pathway protein F RYU24_27570 IPR042094 Type II secretion system F domain superfamily RYU24_27580 IPR014001 Helicase superfamily 1/2, ATP-binding domain RYU24_27580 IPR001650 Helicase, C-terminal RYU24_27580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_27580 IPR005259 Primosomal protein N' RYU24_27580 IPR041222 Primosomal protein N', 3' DNA-binding domain RYU24_27580 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily RYU24_27580 IPR041236 Primosomal protein N, C-terminal domain RYU24_27580 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain RYU24_27580 IPR011545 DEAD/DEAH box helicase domain RYU24_27590 IPR006153 Cation/H+ exchanger RYU24_27590 IPR004771 K+/H+ exchanger RYU24_27590 IPR020884 Glutathione-regulated potassium-efflux system protein KefB RYU24_27590 IPR038770 Sodium/solute symporter superfamily RYU24_27590 IPR036291 NAD(P)-binding domain superfamily RYU24_27590 IPR003148 Regulator of K+ conductance, N-terminal RYU24_27600 IPR000397 Heat shock protein Hsp33 RYU24_27600 IPR016154 Heat shock protein Hsp33, C-terminal RYU24_27600 IPR016153 Heat shock protein Hsp33, N-terminal RYU24_27600 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily RYU24_27640 IPR022835 Chaperone modulatory protein CbpM RYU24_27650 IPR007420 Protein of unknown function DUF465 RYU24_27650 IPR038444 DUF465 superfamily RYU24_27660 IPR001247 Exoribonuclease, phosphorolytic domain 1 RYU24_27660 IPR015847 Exoribonuclease, phosphorolytic domain 2 RYU24_27660 IPR004087 K Homology domain RYU24_27660 IPR003029 S1 domain RYU24_27660 IPR004088 K Homology domain, type 1 RYU24_27660 IPR036612 K Homology domain, type 1 superfamily RYU24_27660 IPR012340 Nucleic acid-binding, OB-fold RYU24_27660 IPR012162 Polyribonucleotide nucleotidyltransferase RYU24_27660 IPR027408 PNPase/RNase PH domain superfamily RYU24_27660 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RYU24_27660 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily RYU24_27660 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_27660 IPR022967 RNA-binding domain, S1 RYU24_27660 IPR036345 Exoribonuclease, PH domain 2 superfamily RYU24_27670 IPR009068 S15/NS1, RNA-binding RYU24_27670 IPR000589 Ribosomal protein S15 RYU24_27670 IPR005290 Ribosomal protein S15, bacterial-type RYU24_27680 IPR027785 UvrD-like helicase C-terminal domain RYU24_27680 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain RYU24_27680 IPR006344 RecBCD enzyme subunit RecD RYU24_27680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_27680 IPR003593 AAA+ ATPase domain RYU24_27690 IPR014017 UvrD-like DNA helicase, C-terminal RYU24_27690 IPR000212 DNA helicase, UvrD/REP type RYU24_27690 IPR011604 Exonuclease, phage-type/RecB, C-terminal RYU24_27690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_27690 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type RYU24_27690 IPR004586 RecBCD enzyme subunit RecB RYU24_27690 IPR011335 Restriction endonuclease type II-like RYU24_27690 IPR034739 UvrD/AddA helicase, N-terminal RYU24_27690 IPR014016 UvrD-like helicase, ATP-binding domain RYU24_27700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_27700 IPR011335 Restriction endonuclease type II-like RYU24_27700 IPR013986 DExx box DNA helicase domain superfamily RYU24_27700 IPR006697 RecBCD enzyme subunit RecC RYU24_27700 IPR041500 RecC, C-terminal RYU24_27720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_27720 IPR022488 Polyphosphate kinase-2-related RYU24_27740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_27740 IPR004033 UbiE/COQ5 methyltransferase RYU24_27740 IPR023576 UbiE/COQ5 methyltransferase, conserved site RYU24_27760 IPR011009 Protein kinase-like domain superfamily RYU24_27760 IPR010232 Probable protein kinase UbiB RYU24_27760 IPR004147 UbiB domain RYU24_27810 IPR037027 YqgF/RNase H-like domain superfamily RYU24_27810 IPR006641 YqgF/RNase H-like domain RYU24_27810 IPR032639 Tex protein, YqgF-like domain RYU24_27810 IPR018974 Tex-like protein, N-terminal RYU24_27810 IPR023319 Tex-like protein, HTH domain superfamily RYU24_27810 IPR010994 RuvA domain 2-like RYU24_27810 IPR003029 S1 domain RYU24_27810 IPR022967 RNA-binding domain, S1 RYU24_27810 IPR012337 Ribonuclease H-like superfamily RYU24_27810 IPR041692 HHH domain 9 RYU24_27810 IPR023323 Tex-like domain superfamily RYU24_27810 IPR012340 Nucleic acid-binding, OB-fold RYU24_27820 IPR011006 CheY-like superfamily RYU24_27820 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_27820 IPR001789 Signal transduction response regulator, receiver domain RYU24_27820 IPR039420 Transcriptional regulatory protein WalR-like RYU24_27820 IPR036388 Winged helix-like DNA-binding domain superfamily RYU24_27820 IPR001867 OmpR/PhoB-type DNA-binding domain RYU24_27830 IPR003660 HAMP domain RYU24_27830 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_27830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_27830 IPR005467 Histidine kinase domain RYU24_27830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_27830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_27830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_27840 IPR017821 Succinate CoA transferase RYU24_27840 IPR037171 NagB/RpiA transferase-like RYU24_27840 IPR003702 Acetyl-CoA hydrolase/transferase RYU24_27840 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RYU24_27840 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily RYU24_27850 IPR001853 DSBA-like thioredoxin domain RYU24_27850 IPR036249 Thioredoxin-like superfamily RYU24_27920 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_27920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_27920 IPR037196 HSP90, C-terminal domain RYU24_27920 IPR001404 Heat shock protein Hsp90 family RYU24_27920 IPR020575 Heat shock protein Hsp90, N-terminal RYU24_27920 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_27940 IPR005618 Outer membrane protein, OmpW RYU24_27940 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel RYU24_27950 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal RYU24_27950 IPR032813 Putative Na+/H+ antiporter, N-terminal RYU24_27990 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RYU24_27990 IPR000722 RNA polymerase, alpha subunit RYU24_27990 IPR006592 RNA polymerase, N-terminal RYU24_27990 IPR007080 RNA polymerase Rpb1, domain 1 RYU24_27990 IPR007066 RNA polymerase Rpb1, domain 3 RYU24_27990 IPR042102 RNA polymerase Rpb1, domain 3 superfamily RYU24_27990 IPR007083 RNA polymerase Rpb1, domain 4 RYU24_27990 IPR007081 RNA polymerase Rpb1, domain 5 RYU24_27990 IPR038120 RNA polymerase Rpb1, funnel domain superfamily RYU24_28000 IPR007641 RNA polymerase Rpb2, domain 7 RYU24_28000 IPR007645 RNA polymerase Rpb2, domain 3 RYU24_28000 IPR037034 RNA polymerase Rpb2, domain 2 superfamily RYU24_28000 IPR007642 RNA polymerase Rpb2, domain 2 RYU24_28000 IPR007644 RNA polymerase, beta subunit, protrusion RYU24_28000 IPR014724 RNA polymerase Rpb2, OB-fold RYU24_28000 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type RYU24_28000 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily RYU24_28000 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain RYU24_28000 IPR015712 DNA-directed RNA polymerase, subunit 2 RYU24_28000 IPR007121 RNA polymerase, beta subunit, conserved site RYU24_28000 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RYU24_28020 IPR000206 Ribosomal protein L7/L12 RYU24_28020 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RYU24_28020 IPR013823 Ribosomal protein L7/L12, C-terminal RYU24_28020 IPR008932 Ribosomal protein L7/L12, oligomerisation RYU24_28020 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily RYU24_28030 IPR002363 Ribosomal protein L10, eubacterial, conserved site RYU24_28030 IPR022973 Ribosomal protein L10 RYU24_28030 IPR001790 Ribosomal protein L10P RYU24_28040 IPR005878 Ribosomal protein L1, bacterial-type RYU24_28040 IPR002143 Ribosomal protein L1 RYU24_28040 IPR023674 Ribosomal protein L1-like RYU24_28040 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RYU24_28040 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RYU24_28040 IPR023673 Ribosomal protein L1, conserved site RYU24_28050 IPR020785 Ribosomal protein L11, conserved site RYU24_28050 IPR036769 Ribosomal protein L11, C-terminal domain superfamily RYU24_28050 IPR020784 Ribosomal protein L11, N-terminal RYU24_28050 IPR006519 Ribosomal protein L11, bacterial-type RYU24_28050 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily RYU24_28050 IPR020783 Ribosomal protein L11, C-terminal RYU24_28050 IPR000911 Ribosomal protein L11/L12 RYU24_28060 IPR005824 KOW RYU24_28060 IPR006645 NusG, N-terminal RYU24_28060 IPR036735 NusG, N-terminal domain superfamily RYU24_28060 IPR014722 Ribosomal protein L2, domain 2 RYU24_28060 IPR001062 Transcription antitermination protein, NusG RYU24_28060 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RYU24_28060 IPR008991 Translation protein SH3-like domain superfamily RYU24_28070 IPR005807 SecE subunit of protein translocation complex, bacterial-like RYU24_28070 IPR038379 SecE superfamily RYU24_28070 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RYU24_28080 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RYU24_28080 IPR005225 Small GTP-binding protein domain RYU24_28080 IPR031157 Tr-type G domain, conserved site RYU24_28080 IPR033720 Elongation factor Tu, domain 2 RYU24_28080 IPR004161 Translation elongation factor EFTu-like, domain 2 RYU24_28080 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain RYU24_28080 IPR000795 Transcription factor, GTP-binding domain RYU24_28080 IPR009000 Translation protein, beta-barrel domain superfamily RYU24_28080 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RYU24_28080 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RYU24_28080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_28090 IPR005801 ADC synthase RYU24_28090 IPR019999 Anthranilate synthase component I-like RYU24_28090 IPR006805 Anthranilate synthase component I, N-terminal RYU24_28090 IPR015890 Chorismate-utilising enzyme, C-terminal RYU24_28090 IPR005256 Anthranilate synthase component I, PabB-like RYU24_28100 IPR036412 HAD-like superfamily RYU24_28100 IPR006439 HAD hydrolase, subfamily IA RYU24_28100 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_28100 IPR023214 HAD superfamily RYU24_28100 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RYU24_28100 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RYU24_28100 IPR037512 Phosphoglycolate phosphatase, prokaryotic RYU24_28110 IPR000253 Forkhead-associated (FHA) domain RYU24_28110 IPR008984 SMAD/FHA domain superfamily RYU24_28110 IPR032030 YscD, cytoplasmic domain RYU24_28120 IPR001775 GspD/PilQ family RYU24_28120 IPR005644 NolW-like RYU24_28120 IPR038591 NolW-like superfamily RYU24_28120 IPR004846 Type II/III secretion system RYU24_28120 IPR013356 Type II secretion system GspD RYU24_28120 IPR004845 Type II secretion system GspD, conserved site RYU24_28150 IPR001801 Histone-like protein H-NS RYU24_28150 IPR027444 Histone-like protein H-NS, C-terminal domain RYU24_28150 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily RYU24_28160 IPR029069 HotDog domain superfamily RYU24_28160 IPR006683 Thioesterase domain RYU24_28200 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RYU24_28200 IPR022417 Porphobilinogen deaminase, N-terminal RYU24_28200 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily RYU24_28200 IPR000860 Porphobilinogen deaminase RYU24_28200 IPR022418 Porphobilinogen deaminase, C-terminal RYU24_28210 IPR011006 CheY-like superfamily RYU24_28210 IPR007492 LytTR DNA-binding domain RYU24_28210 IPR001789 Signal transduction response regulator, receiver domain RYU24_28220 IPR029016 GAF-like domain superfamily RYU24_28220 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_28220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_28220 IPR010559 Signal transduction histidine kinase, internal region RYU24_28220 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RYU24_28230 IPR009049 Argininosuccinate lyase RYU24_28230 IPR020557 Fumarate lyase, conserved site RYU24_28230 IPR000362 Fumarate lyase family RYU24_28230 IPR022761 Fumarate lyase, N-terminal RYU24_28230 IPR008948 L-Aspartase-like RYU24_28230 IPR029419 Argininosuccinate lyase, C-terminal RYU24_28230 IPR024083 Fumarase/histidase, N-terminal RYU24_28240 IPR007457 Fe(II) trafficking protein YggX RYU24_28240 IPR036766 Fe(II) trafficking protein YggX superfamily RYU24_28250 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RYU24_28250 IPR000462 CDP-alcohol phosphatidyltransferase RYU24_28270 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RYU24_28270 IPR010994 RuvA domain 2-like RYU24_28270 IPR001943 UVR domain RYU24_28270 IPR036876 UVR domain superfamily RYU24_28270 IPR004791 UvrABC system, subunit C RYU24_28270 IPR001162 UvrC family homology region RYU24_28270 IPR038476 UvrC homology region 2 superfamily RYU24_28270 IPR035901 GIY-YIG endonuclease superfamily RYU24_28270 IPR000305 GIY-YIG endonuclease RYU24_28280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_28280 IPR019489 Clp ATPase, C-terminal RYU24_28280 IPR001270 ClpA/B family RYU24_28280 IPR003959 ATPase, AAA-type, core RYU24_28280 IPR003593 AAA+ ATPase domain RYU24_28310 IPR001753 Enoyl-CoA hydratase/isomerase RYU24_28310 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RYU24_28310 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RYU24_28310 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RYU24_28310 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RYU24_28310 IPR029045 ClpP/crotonase-like domain superfamily RYU24_28310 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RYU24_28310 IPR012799 Fatty oxidation complex, alpha subunit FadB RYU24_28310 IPR036291 NAD(P)-binding domain superfamily RYU24_28320 IPR020610 Thiolase, active site RYU24_28320 IPR020615 Thiolase, acyl-enzyme intermediate active site RYU24_28320 IPR016039 Thiolase-like RYU24_28320 IPR020616 Thiolase, N-terminal RYU24_28320 IPR012805 Acetyl-CoA C-acyltransferase FadA RYU24_28320 IPR020617 Thiolase, C-terminal RYU24_28320 IPR002155 Thiolase RYU24_28320 IPR020613 Thiolase, conserved site RYU24_28350 IPR014431 Tellurite resistance methyltransferase, TehB type-2 RYU24_28350 IPR015392 Domain of unknown function DUF1971 RYU24_28350 IPR014710 RmlC-like jelly roll fold RYU24_28350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_28350 IPR015985 Tellurite resistance methyltransferase TehB-like domain RYU24_28350 IPR004537 Tellurite resistance methyltransferase, TehB RYU24_28400 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily RYU24_28400 IPR000807 Imidazoleglycerol-phosphate dehydratase RYU24_28400 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RYU24_28400 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_28410 IPR029062 Class I glutamine amidotransferase-like RYU24_28410 IPR017926 Glutamine amidotransferase RYU24_28410 IPR010139 Imidazole glycerol phosphate synthase, subunit H RYU24_28430 IPR006062 Histidine biosynthesis RYU24_28430 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RYU24_28430 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RYU24_28430 IPR011060 Ribulose-phosphate binding barrel RYU24_28430 IPR013785 Aldolase-type TIM barrel RYU24_28470 IPR002575 Aminoglycoside phosphotransferase RYU24_28470 IPR011009 Protein kinase-like domain superfamily RYU24_28470 IPR005280 Homoserine kinase, type II RYU24_28480 IPR011060 Ribulose-phosphate binding barrel RYU24_28480 IPR004651 Histidine biosynthesis, HisF RYU24_28480 IPR013785 Aldolase-type TIM barrel RYU24_28480 IPR006062 Histidine biosynthesis RYU24_28550 IPR023051 Potassium uptake protein, low affinity, Kup RYU24_28550 IPR003855 Potassium transporter RYU24_28600 IPR011051 RmlC-like cupin domain superfamily RYU24_28600 IPR014710 RmlC-like jelly roll fold RYU24_28600 IPR003829 Pirin, N-terminal domain RYU24_28600 IPR008778 Pirin, C-terminal domain RYU24_28600 IPR012093 Pirin RYU24_28610 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RYU24_28610 IPR024706 Peroxiredoxin, AhpC-type RYU24_28610 IPR019479 Peroxiredoxin, C-terminal RYU24_28610 IPR036249 Thioredoxin-like superfamily RYU24_28610 IPR013766 Thioredoxin domain RYU24_28610 IPR017559 Alkyl hydroperoxide reductase subunit C RYU24_28640 IPR012340 Nucleic acid-binding, OB-fold RYU24_28640 IPR000424 Primosome PriB/single-strand DNA-binding RYU24_28640 IPR011344 Single-stranded DNA-binding protein RYU24_28650 IPR036259 MFS transporter superfamily RYU24_28650 IPR020846 Major facilitator superfamily domain RYU24_28650 IPR011701 Major facilitator superfamily RYU24_28680 IPR013785 Aldolase-type TIM barrel RYU24_28680 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RYU24_28680 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RYU24_28680 IPR034291 Thiamine phosphate synthase RYU24_28680 IPR016084 Haem oxygenase-like, multi-helical RYU24_28680 IPR036206 Thiamin phosphate synthase superfamily RYU24_28680 IPR004305 Thiaminase-2/PQQC RYU24_28680 IPR029056 Ribokinase-like RYU24_28680 IPR022998 Thiamine phosphate synthase/TenI RYU24_28690 IPR003439 ABC transporter-like RYU24_28690 IPR017871 ABC transporter, conserved site RYU24_28690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_28690 IPR004602 UvrABC system subunit A RYU24_28690 IPR041552 UvrA DNA-binding domain RYU24_28690 IPR041102 UvrA, interaction domain RYU24_28710 IPR000160 GGDEF domain RYU24_28710 IPR009050 Globin-like superfamily RYU24_28710 IPR012292 Globin/Protoglobin RYU24_28710 IPR029787 Nucleotide cyclase RYU24_28710 IPR039435 Diguanylate cyclase DosC, globin sensor domain RYU24_28730 IPR000060 BCCT transporter family RYU24_28730 IPR018093 BCCT transporter, conserved site RYU24_28750 IPR001734 Sodium/solute symporter RYU24_28750 IPR014083 Cation/acetate symporter ActP RYU24_28750 IPR038377 Sodium/glucose symporter superfamily RYU24_28750 IPR018212 Sodium/solute symporter, conserved site RYU24_28760 IPR007436 Protein of unknown function DUF485 RYU24_28770 IPR011006 CheY-like superfamily RYU24_28770 IPR003660 HAMP domain RYU24_28770 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_28770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_28770 IPR005467 Histidine kinase domain RYU24_28770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RYU24_28770 IPR036641 HPT domain superfamily RYU24_28770 IPR037952 Sensor histidine kinase TorS, sensor domain RYU24_28770 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RYU24_28770 IPR001789 Signal transduction response regulator, receiver domain RYU24_28770 IPR038188 TorS, sensor domain superfamily RYU24_28770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RYU24_28770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RYU24_28790 IPR000792 Transcription regulator LuxR, C-terminal RYU24_28790 IPR011006 CheY-like superfamily RYU24_28790 IPR001789 Signal transduction response regulator, receiver domain RYU24_28790 IPR016032 Signal transduction response regulator, C-terminal effector RYU24_28800 IPR019912 FMN reductase, MsuE-like RYU24_28800 IPR005025 NADPH-dependent FMN reductase-like RYU24_28800 IPR029039 Flavoprotein-like superfamily RYU24_28810 IPR036661 Luciferase-like domain superfamily RYU24_28810 IPR011251 Luciferase-like domain RYU24_28810 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG RYU24_28820 IPR026017 Lumazine-binding domain RYU24_28820 IPR017938 Riboflavin synthase-like beta-barrel RYU24_28820 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RYU24_28820 IPR001783 Lumazine-binding protein RYU24_28830 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily RYU24_28830 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily RYU24_28830 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RYU24_28830 IPR002081 Cryptochrome/DNA photolyase class 1 RYU24_28830 IPR006050 DNA photolyase, N-terminal RYU24_28830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_28830 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RYU24_28840 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RYU24_28840 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RYU24_28840 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RYU24_28840 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RYU24_28840 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RYU24_28850 IPR020845 AMP-binding, conserved site RYU24_28850 IPR011904 Acetate-CoA ligase RYU24_28850 IPR025110 AMP-binding enzyme, C-terminal domain RYU24_28850 IPR000873 AMP-dependent synthetase/ligase RYU24_28850 IPR042099 AMP-dependent synthetase-like superfamily RYU24_28850 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain RYU24_28870 IPR006685 Mechanosensitive ion channel MscS RYU24_28870 IPR011066 Mechanosensitive ion channel MscS, C-terminal RYU24_28870 IPR006686 Mechanosensitive ion channel MscS, conserved site RYU24_28870 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RYU24_28870 IPR023408 Mechanosensitive ion channel MscS domain superfamily RYU24_28870 IPR008910 Conserved TM helix RYU24_28870 IPR010920 LSM domain superfamily RYU24_28880 IPR029028 Alpha/beta knot methyltransferases RYU24_28880 IPR006700 Ribosomal RNA small subunit methyltransferase E RYU24_28880 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RYU24_28890 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RYU24_28890 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily RYU24_28890 IPR039901 3-deoxy-D-manno-octulosonic acid transferase RYU24_28900 IPR013785 Aldolase-type TIM barrel RYU24_28900 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RYU24_28920 IPR005139 Peptide chain release factor RYU24_28920 IPR000352 Peptide chain release factor class I RYU24_28920 IPR004374 Peptide chain release factor 2 RYU24_28950 IPR003156 DHHA1 domain RYU24_28950 IPR001667 DDH domain RYU24_28950 IPR004610 Bacterial RecJ exonuclease RYU24_28950 IPR041122 RecJ, OB domain RYU24_28950 IPR038763 DHH phosphoesterase superfamily RYU24_28960 IPR000659 Pyridoxamine 5'-phosphate oxidase RYU24_28960 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RYU24_28960 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RYU24_28960 IPR012349 FMN-binding split barrel RYU24_28960 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RYU24_28970 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RYU24_28970 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RYU24_28970 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RYU24_28970 IPR016066 Alpha-D-phosphohexomutase, conserved site RYU24_28970 IPR005841 Alpha-D-phosphohexomutase superfamily RYU24_28970 IPR006352 Phosphoglucosamine mutase, bacterial type RYU24_28970 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RYU24_28970 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RYU24_28970 IPR005843 Alpha-D-phosphohexomutase, C-terminal RYU24_28980 IPR001093 IMP dehydrogenase/GMP reductase RYU24_28980 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RYU24_28980 IPR005990 Inosine-5'-monophosphate dehydrogenase RYU24_28980 IPR000644 CBS domain RYU24_28980 IPR013785 Aldolase-type TIM barrel RYU24_28990 IPR005358 Putative zinc- or iron-chelating domain containing protein RYU24_29000 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RYU24_29000 IPR002563 Flavin reductase like domain RYU24_29000 IPR001279 Metallo-beta-lactamase RYU24_29000 IPR029039 Flavoprotein-like superfamily RYU24_29000 IPR001226 Flavodoxin, conserved site RYU24_29000 IPR008254 Flavodoxin/nitric oxide synthase RYU24_29000 IPR012349 FMN-binding split barrel RYU24_29010 IPR001727 Gdt1 family RYU24_29020 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RYU24_29020 IPR011053 Single hybrid motif RYU24_29020 IPR000089 Biotin/lipoyl attachment RYU24_29020 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex RYU24_29020 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RYU24_29020 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RYU24_29020 IPR036625 E3-binding domain superfamily RYU24_29020 IPR004167 Peripheral subunit-binding domain RYU24_29030 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal RYU24_29030 IPR004660 Pyruvate dehydrogenase E1 component RYU24_29030 IPR005474 Transketolase, N-terminal RYU24_29030 IPR041621 Pyruvate dehydrogenase E1 component, middle domain RYU24_29030 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RYU24_29030 IPR029061 Thiamin diphosphate-binding fold RYU24_29060 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RYU24_29060 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RYU24_29060 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RYU24_29060 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_29070 IPR003008 Tubulin/FtsZ, GTPase domain RYU24_29070 IPR036525 Tubulin/FtsZ, GTPase domain superfamily RYU24_29070 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RYU24_29070 IPR008280 Tubulin/FtsZ, C-terminal RYU24_29070 IPR024757 Cell division protein FtsZ, C-terminal RYU24_29070 IPR020805 Cell division protein FtsZ, conserved site RYU24_29070 IPR000158 Cell division protein FtsZ RYU24_29080 IPR003494 SHS2 domain inserted in FtsA RYU24_29080 IPR020823 Cell division protein FtsA RYU24_29090 IPR034746 POTRA domain RYU24_29090 IPR026579 Cell division protein FtsQ RYU24_29090 IPR013685 POTRA domain, FtsQ-type RYU24_29090 IPR005548 Cell division protein FtsQ/DivIB RYU24_29100 IPR016185 Pre-ATP-grasp domain superfamily RYU24_29100 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RYU24_29100 IPR011095 D-alanine--D-alanine ligase, C-terminal RYU24_29100 IPR005905 D-alanine--D-alanine ligase RYU24_29100 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RYU24_29100 IPR013815 ATP-grasp fold, subdomain 1 RYU24_29100 IPR011761 ATP-grasp fold RYU24_29110 IPR000713 Mur ligase, N-terminal catalytic domain RYU24_29110 IPR013221 Mur ligase, central RYU24_29110 IPR036615 Mur ligase, C-terminal domain superfamily RYU24_29110 IPR036565 Mur-like, catalytic domain superfamily RYU24_29110 IPR005758 UDP-N-acetylmuramate--L-alanine ligase RYU24_29110 IPR004101 Mur ligase, C-terminal RYU24_29120 IPR004276 Glycosyltransferase family 28, N-terminal domain RYU24_29120 IPR006009 N-acetylglucosaminyltransferase, MurG RYU24_29120 IPR007235 Glycosyl transferase, family 28, C-terminal RYU24_29140 IPR013815 ATP-grasp fold, subdomain 1 RYU24_29140 IPR006284 Glutathione synthetase, prokaryotic RYU24_29140 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RYU24_29140 IPR004215 Prokaryotic glutathione synthetase, N-terminal RYU24_29140 IPR016185 Pre-ATP-grasp domain superfamily RYU24_29140 IPR011761 ATP-grasp fold RYU24_29170 IPR023031 Orotate phosphoribosyltransferase RYU24_29170 IPR029057 Phosphoribosyltransferase-like RYU24_29170 IPR000836 Phosphoribosyltransferase domain RYU24_29170 IPR004467 Orotate phosphoribosyl transferase domain RYU24_29180 IPR004808 AP endonuclease 1 RYU24_29180 IPR020847 AP endonuclease 1, binding site RYU24_29180 IPR020848 AP endonuclease 1, conserved site RYU24_29180 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RYU24_29180 IPR005135 Endonuclease/exonuclease/phosphatase RYU24_29210 IPR013094 Alpha/beta hydrolase fold-3 RYU24_29210 IPR002168 Lipase, GDXG, putative histidine active site RYU24_29210 IPR033140 Lipase, GDXG, putative serine active site RYU24_29210 IPR029058 Alpha/Beta hydrolase fold RYU24_29220 IPR003680 Flavodoxin-like fold RYU24_29220 IPR029039 Flavoprotein-like superfamily RYU24_29220 IPR023048 NADH-azoreductase, FMN-dependent RYU24_29240 IPR000160 GGDEF domain RYU24_29240 IPR029787 Nucleotide cyclase RYU24_29240 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RYU24_29250 IPR003834 Cytochrome C biogenesis protein, transmembrane domain RYU24_29250 IPR035671 DsbD gamma RYU24_29250 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RYU24_29250 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily RYU24_29250 IPR022910 Thiol:disulphide interchange protein DsbD RYU24_29250 IPR017937 Thioredoxin, conserved site RYU24_29250 IPR013766 Thioredoxin domain RYU24_29250 IPR036249 Thioredoxin-like superfamily RYU24_29290 IPR027806 Harbinger transposase-derived nuclease domain RYU24_29290 IPR027805 Transposase, Helix-turn-helix domain RYU24_29320 IPR000182 GNAT domain RYU24_29320 IPR016181 Acyl-CoA N-acyltransferase RYU24_29340 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RYU24_29340 IPR002288 DNA gyrase B subunit, C-terminal RYU24_29340 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_29340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_29340 IPR001241 DNA topoisomerase, type IIA RYU24_29340 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RYU24_29340 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RYU24_29340 IPR018522 DNA topoisomerase, type IIA, conserved site RYU24_29340 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RYU24_29340 IPR006171 TOPRIM domain RYU24_29340 IPR003594 Histidine kinase/HSP90-like ATPase RYU24_29340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RYU24_29350 IPR029058 Alpha/Beta hydrolase fold RYU24_29350 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RYU24_29370 IPR023380 DsbB-like superfamily RYU24_29370 IPR003752 Disulphide bond formation protein DsbB/BdbC RYU24_29370 IPR022920 Disulphide bond formation protein DsbB RYU24_29380 IPR006334 Glutamate--cysteine ligase, monofunctional RYU24_29380 IPR007370 Glutamate--cysteine ligase RYU24_29380 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RYU24_29410 IPR007383 Protein of unknown function DUF445 RYU24_29430 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RYU24_29430 IPR008909 DALR anticodon binding RYU24_29430 IPR035684 Arginyl-tRNA synthetase, catalytic core domain RYU24_29430 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily RYU24_29430 IPR005148 Arginyl tRNA synthetase N-terminal domain RYU24_29430 IPR001278 Arginine-tRNA ligase RYU24_29450 IPR003817 Phosphatidylserine decarboxylase-related RYU24_29450 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 RYU24_29450 IPR033177 Phosphatidylserine decarboxylase RYU24_29460 IPR001763 Rhodanese-like domain RYU24_29460 IPR036873 Rhodanese-like domain superfamily RYU24_29460 IPR001307 Thiosulphate sulfurtransferase, conserved site RYU24_29470 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal RYU24_29470 IPR007229 Nicotinate phosphoribosyltransferase family RYU24_29470 IPR006406 Nicotinate phosphoribosyltransferase RYU24_29470 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain RYU24_29470 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase RYU24_29490 IPR024708 Catalase active site RYU24_29490 IPR018028 Catalase, mono-functional, haem-containing RYU24_29490 IPR011614 Catalase core domain RYU24_29490 IPR002226 Catalase haem-binding site RYU24_29490 IPR010582 Catalase immune-responsive domain RYU24_29490 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RYU24_29490 IPR020835 Catalase superfamily RYU24_29490 IPR037060 Catalase core domain superfamily RYU24_29500 IPR003732 D-aminoacyl-tRNA deacylase DTD RYU24_29500 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily RYU24_29530 IPR002912 ACT domain RYU24_29530 IPR036412 HAD-like superfamily RYU24_29530 IPR023190 Phosphoserine phosphatase, domain 2 RYU24_29530 IPR023214 HAD superfamily RYU24_29550 IPR003414 Polyphosphate kinase RYU24_29550 IPR036832 Polyphosphate kinase N-terminal domain superfamily RYU24_29550 IPR025198 Polyphosphate kinase N-terminal domain RYU24_29550 IPR025200 Polyphosphate kinase C-terminal domain 2 RYU24_29550 IPR036830 Polyphosphate kinase middle domain superfamily RYU24_29550 IPR024953 Polyphosphate kinase middle domain RYU24_29550 IPR041108 Polyphosphate kinase, C-terminal domain 1 RYU24_29560 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 RYU24_29560 IPR004710 Bile acid:sodium symporter RYU24_29560 IPR038770 Sodium/solute symporter superfamily RYU24_29570 IPR000868 Isochorismatase-like RYU24_29570 IPR036380 Isochorismatase-like superfamily RYU24_29580 IPR036259 MFS transporter superfamily RYU24_29580 IPR020846 Major facilitator superfamily domain RYU24_29580 IPR011701 Major facilitator superfamily RYU24_29580 IPR005829 Sugar transporter, conserved site RYU24_29590 IPR011701 Major facilitator superfamily RYU24_29590 IPR020846 Major facilitator superfamily domain RYU24_29590 IPR036259 MFS transporter superfamily RYU24_29590 IPR005829 Sugar transporter, conserved site RYU24_29600 IPR011701 Major facilitator superfamily RYU24_29600 IPR020846 Major facilitator superfamily domain RYU24_29600 IPR036259 MFS transporter superfamily RYU24_29600 IPR005829 Sugar transporter, conserved site RYU24_29610 IPR020625 Schiff base-forming aldolase, active site RYU24_29610 IPR020624 Schiff base-forming aldolase, conserved site RYU24_29610 IPR002220 DapA-like RYU24_29610 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RYU24_29610 IPR013785 Aldolase-type TIM barrel RYU24_29630 IPR018236 SAICAR synthetase, conserved site RYU24_29630 IPR028923 SAICAR synthetase/ADE2, N-terminal RYU24_29630 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase RYU24_29630 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RYU24_29640 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RYU24_29640 IPR021886 MgsA AAA+ ATPase C-terminal RYU24_29640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_29640 IPR003959 ATPase, AAA-type, core RYU24_29640 IPR003593 AAA+ ATPase domain RYU24_29640 IPR032423 AAA C-terminal domain RYU24_29650 IPR029787 Nucleotide cyclase RYU24_29650 IPR001633 EAL domain RYU24_29650 IPR035919 EAL domain superfamily RYU24_29650 IPR000160 GGDEF domain RYU24_29650 IPR005330 MHYT domain RYU24_29650 IPR000014 PAS domain RYU24_29650 IPR035965 PAS domain superfamily RYU24_29660 IPR005358 Putative zinc- or iron-chelating domain containing protein RYU24_29660 IPR008228 Uncharacterised conserved protein UCP006173 RYU24_29670 IPR009760 Protein of unknown function DUF1328 RYU24_29680 IPR004268 Peptidoglycan biosynthesis protein MurJ RYU24_29690 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RYU24_29690 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RYU24_29700 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily RYU24_29700 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RYU24_29700 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RYU24_29700 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal RYU24_29700 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RYU24_29700 IPR013785 Aldolase-type TIM barrel RYU24_29700 IPR004393 Nicotinate-nucleotide pyrophosphorylase RYU24_29720 IPR001247 Exoribonuclease, phosphorolytic domain 1 RYU24_29720 IPR015847 Exoribonuclease, phosphorolytic domain 2 RYU24_29720 IPR036345 Exoribonuclease, PH domain 2 superfamily RYU24_29720 IPR027408 PNPase/RNase PH domain superfamily RYU24_29720 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_29720 IPR002381 Ribonuclease PH, bacterial-type RYU24_29720 IPR018336 Ribonuclease PH, conserved site RYU24_29730 IPR001647 DNA-binding HTH domain, TetR-type RYU24_29730 IPR009057 Homeobox-like domain superfamily RYU24_29730 IPR023764 Transcriptional repressor HTH, FabR RYU24_29740 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RYU24_29740 IPR036249 Thioredoxin-like superfamily RYU24_29740 IPR013766 Thioredoxin domain RYU24_29740 IPR017937 Thioredoxin, conserved site RYU24_29740 IPR001853 DSBA-like thioredoxin domain RYU24_29750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RYU24_29750 IPR010233 Ubiquinone biosynthesis O-methyltransferase RYU24_29760 IPR036412 HAD-like superfamily RYU24_29760 IPR006439 HAD hydrolase, subfamily IA RYU24_29760 IPR041492 Haloacid dehalogenase-like hydrolase RYU24_29760 IPR023214 HAD superfamily RYU24_29760 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RYU24_29760 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RYU24_29770 IPR036291 NAD(P)-binding domain superfamily RYU24_29770 IPR020904 Short-chain dehydrogenase/reductase, conserved site RYU24_29770 IPR002347 Short-chain dehydrogenase/reductase SDR RYU24_29820 IPR010167 Amino-acid N-acetyltransferase RYU24_29820 IPR033719 N-acetylglutamate synthase, kinase-like domain RYU24_29820 IPR000182 GNAT domain RYU24_29820 IPR016181 Acyl-CoA N-acyltransferase RYU24_29820 IPR001048 Aspartate/glutamate/uridylate kinase RYU24_29820 IPR036393 Acetylglutamate kinase-like superfamily RYU24_29830 IPR010067 Aliphatic sulfonates-binding protein RYU24_29830 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RYU24_29830 IPR015168 SsuA/THI5-like RYU24_29840 IPR015168 SsuA/THI5-like RYU24_29840 IPR010067 Aliphatic sulfonates-binding protein RYU24_29840 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RYU24_29850 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent RYU24_29850 IPR011251 Luciferase-like domain RYU24_29850 IPR036661 Luciferase-like domain superfamily RYU24_29860 IPR035906 MetI-like superfamily RYU24_29860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RYU24_29870 IPR003439 ABC transporter-like RYU24_29870 IPR003593 AAA+ ATPase domain RYU24_29870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_29870 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB RYU24_29880 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RYU24_29880 IPR001647 DNA-binding HTH domain, TetR-type RYU24_29880 IPR019915 Transcription regulator, pyrimidine utilisation, RutR RYU24_29880 IPR013573 Transcription regulator YcdC, C-terminal RYU24_29880 IPR009057 Homeobox-like domain superfamily RYU24_29900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_29900 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RYU24_29900 IPR023465 Riboflavin kinase domain superfamily RYU24_29900 IPR023468 Riboflavin kinase RYU24_29900 IPR002606 Riboflavin kinase, bacterial RYU24_29900 IPR015864 FAD synthetase RYU24_29910 IPR010663 Zinc finger, FPG/IleRS-type RYU24_29910 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_29910 IPR002300 Aminoacyl-tRNA synthetase, class Ia RYU24_29910 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain RYU24_29910 IPR002301 Isoleucine-tRNA ligase RYU24_29910 IPR023585 Isoleucine-tRNA ligase, type 1 RYU24_29910 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RYU24_29910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_29910 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RYU24_29910 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RYU24_29920 IPR001872 Peptidase A8, signal peptidase II RYU24_29930 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RYU24_29960 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RYU24_29960 IPR012938 Glucose/Sorbosone dehydrogenase RYU24_29960 IPR011042 Six-bladed beta-propeller, TolB-like RYU24_29970 IPR001633 EAL domain RYU24_29970 IPR035919 EAL domain superfamily RYU24_29970 IPR003018 GAF domain RYU24_29970 IPR029016 GAF-like domain superfamily RYU24_29970 IPR000160 GGDEF domain RYU24_29970 IPR029787 Nucleotide cyclase RYU24_29970 IPR016132 Phytochrome chromophore attachment domain RYU24_29970 IPR001294 Phytochrome RYU24_29970 IPR013515 Phytochrome, central region RYU24_30000 IPR002305 Aminoacyl-tRNA synthetase, class Ic RYU24_30000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RYU24_30000 IPR002942 RNA-binding S4 domain RYU24_30000 IPR024088 Tyrosine-tRNA ligase, bacterial-type RYU24_30000 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 RYU24_30000 IPR036986 RNA-binding S4 domain superfamily RYU24_30000 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RYU24_30000 IPR002307 Tyrosine-tRNA ligase RYU24_30010 IPR005338 Anhydro-N-acetylmuramic acid kinase RYU24_30020 IPR031304 Transglycosylase SLT domain 2 RYU24_30020 IPR023346 Lysozyme-like domain superfamily RYU24_30020 IPR011757 Lytic transglycosylase MltB RYU24_30030 IPR011761 ATP-grasp fold RYU24_30030 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RYU24_30030 IPR013815 ATP-grasp fold, subdomain 1 RYU24_30030 IPR016185 Pre-ATP-grasp domain superfamily RYU24_30030 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RYU24_30030 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain RYU24_30030 IPR011054 Rudiment single hybrid motif RYU24_30040 IPR033747 Class I PurE RYU24_30040 IPR000031 PurE domain RYU24_30040 IPR024694 PurE, prokaryotic type RYU24_30040 IPR035893 PurE domain superfamily RYU24_30060 IPR013221 Mur ligase, central RYU24_30060 IPR036615 Mur ligase, C-terminal domain superfamily RYU24_30060 IPR000713 Mur ligase, N-terminal catalytic domain RYU24_30060 IPR036565 Mur-like, catalytic domain superfamily RYU24_30060 IPR005757 Murein peptide ligase RYU24_30060 IPR004101 Mur ligase, C-terminal RYU24_30070 IPR013149 Alcohol dehydrogenase, C-terminal RYU24_30070 IPR013154 Alcohol dehydrogenase, N-terminal RYU24_30070 IPR027399 Alcohol dehydrogenase GroES-associated RYU24_30070 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RYU24_30070 IPR011032 GroES-like superfamily RYU24_30070 IPR036291 NAD(P)-binding domain superfamily RYU24_30080 IPR036291 NAD(P)-binding domain superfamily RYU24_30080 IPR011032 GroES-like superfamily RYU24_30080 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RYU24_30080 IPR013154 Alcohol dehydrogenase, N-terminal RYU24_30080 IPR013149 Alcohol dehydrogenase, C-terminal RYU24_30080 IPR027399 Alcohol dehydrogenase GroES-associated RYU24_30120 IPR011701 Major facilitator superfamily RYU24_30120 IPR020846 Major facilitator superfamily domain RYU24_30120 IPR036259 MFS transporter superfamily RYU24_30120 IPR023495 Sugar efflux transporter, putative RYU24_30130 IPR022369 Integral membrane protein TerC, riboswitch-linked RYU24_30130 IPR005496 Integral membrane protein TerC RYU24_30140 IPR011059 Metal-dependent hydrolase, composite domain superfamily RYU24_30140 IPR032466 Metal-dependent hydrolase RYU24_30140 IPR006680 Amidohydrolase-related RYU24_30140 IPR014311 Guanine deaminase RYU24_30150 IPR005904 Hypoxanthine phosphoribosyl transferase RYU24_30150 IPR000836 Phosphoribosyltransferase domain RYU24_30150 IPR029057 Phosphoribosyltransferase-like RYU24_30170 IPR033954 Disulphide bond isomerase, DsbC/G RYU24_30170 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RYU24_30170 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily RYU24_30170 IPR012336 Thioredoxin-like fold RYU24_30170 IPR036249 Thioredoxin-like superfamily RYU24_30170 IPR017937 Thioredoxin, conserved site RYU24_30180 IPR023500 Zinc transporter ZitB RYU24_30180 IPR027469 Cation efflux transmembrane domain superfamily RYU24_30180 IPR002524 Cation efflux protein RYU24_30180 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RYU24_30190 IPR003735 Metal-sensitive transcriptional repressor RYU24_30190 IPR038390 Metal-sensitive transcriptional repressor superfamily RYU24_30200 IPR011701 Major facilitator superfamily RYU24_30200 IPR020846 Major facilitator superfamily domain RYU24_30200 IPR036259 MFS transporter superfamily RYU24_30210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RYU24_30210 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RYU24_30210 IPR005225 Small GTP-binding protein domain RYU24_30210 IPR025867 MnmE, helical domain RYU24_30210 IPR031168 TrmE-type guanine nucleotide-binding domain RYU24_30210 IPR004520 tRNA modification GTPase MnmE RYU24_30210 IPR006073 GTP binding domain RYU24_30210 IPR018948 GTP-binding protein TrmE, N-terminal RYU24_30210 IPR027368 tRNA modification GTPase MnmE domain 2 RYU24_30220 IPR038221 YidC, periplasmic domain superfamily RYU24_30220 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 RYU24_30220 IPR038210 Membrane insertase YidC, periplasmic domain RYU24_30220 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RYU24_30220 IPR019998 Membrane insertase YidC RYU24_30220 IPR028053 Membrane insertase YidC, N-terminal RYU24_30230 IPR002696 Putative membrane protein insertion efficiency factor RYU24_30240 IPR020568 Ribosomal protein S5 domain 2-type fold RYU24_30240 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RYU24_30240 IPR000100 Ribonuclease P RYU24_30240 IPR020539 Ribonuclease P, conserved site RYU24_30250 IPR000271 Ribosomal protein L34 RYU24_30250 IPR020939 Ribosomal protein L34, conserved site