locus-tag class description BEN71_00015 PF13614 AAA domain BEN71_00090 PF03389 MobA/MobL family BEN71_00090 PF01443 Viral (Superfamily 1) RNA helicase BEN71_00090 PF17841 BID domain of Bartonella effector protein (Bep) BEN71_00115 PF04851 Type III restriction enzyme, res subunit BEN71_00120 PF02796 Helix-turn-helix domain of resolvase BEN71_00120 PF00239 Resolvase, N terminal domain BEN71_00140 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BEN71_00150 PF01464 Transglycosylase SLT domain BEN71_00150 PF10145 Phage-related minor tail protein BEN71_00150 PF01551 Peptidase family M23 BEN71_00165 PF01464 Transglycosylase SLT domain BEN71_00165 PF10145 Phage-related minor tail protein BEN71_00165 PF01551 Peptidase family M23 BEN71_00180 PF00437 Type II/IV secretion system protein BEN71_00185 PF03743 Bacterial conjugation TrbI-like protein BEN71_00215 PF01051 Initiator Replication protein BEN71_00240 PF07963 Prokaryotic N-terminal methylation motif BEN71_00240 PF00114 Pilin (bacterial filament) BEN71_00245 PF07963 Prokaryotic N-terminal methylation motif BEN71_00245 PF08334 Type II secretion system (T2SS), protein G BEN71_00320 PF01443 Viral (Superfamily 1) RNA helicase BEN71_00320 PF17841 BID domain of Bartonella effector protein (Bep) BEN71_00320 PF03389 MobA/MobL family BEN71_00325 PF01051 Initiator Replication protein BEN71_00355 PF01636 Phosphotransferase enzyme family BEN71_00360 PF02796 Helix-turn-helix domain of resolvase BEN71_00360 PF00239 Resolvase, N terminal domain BEN71_00410 PF04221 RelB antitoxin BEN71_00415 PF07690 Major Facilitator Superfamily BEN71_00420 PF00440 Bacterial regulatory proteins, tetR family BEN71_00420 PF02909 Tetracyclin repressor-like, C-terminal domain BEN71_00430 PF05973 Phage derived protein Gp49-like (DUF891) BEN71_00440 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BEN71_00445 PF01636 Phosphotransferase enzyme family BEN71_00450 PF00809 Pterin binding enzyme BEN71_00465 PF03389 MobA/MobL family BEN71_00475 PF01051 Initiator Replication protein BEN71_00490 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BEN71_00505 PF13474 SnoaL-like domain BEN71_00525 PF03389 MobA/MobL family BEN71_00540 PF00893 Small Multidrug Resistance protein BEN71_00560 PF03389 MobA/MobL family BEN71_00585 PF03389 MobA/MobL family BEN71_00625 PF03389 MobA/MobL family BEN71_00665 PF01051 Initiator Replication protein BEN71_00685 PF00308 Bacterial dnaA protein BEN71_00685 PF08299 Bacterial dnaA protein helix-turn-helix BEN71_00685 PF11638 DnaA N-terminal domain BEN71_00690 PF02767 DNA polymerase III beta subunit, central domain BEN71_00690 PF02768 DNA polymerase III beta subunit, C-terminal domain BEN71_00690 PF00712 DNA polymerase III beta subunit, N-terminal domain BEN71_00695 PF02463 RecF/RecN/SMC N terminal domain BEN71_00700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_00700 PF01751 Toprim domain BEN71_00700 PF18053 DNA gyrase B subunit insert domain BEN71_00700 PF00986 DNA gyrase B subunit, carboxyl terminus BEN71_00700 PF00204 DNA gyrase B BEN71_00710 PF00005 ABC transporter BEN71_00710 PF12848 ABC transporter BEN71_00725 PF00579 tRNA synthetases class I (W and Y) BEN71_00730 PF03702 Anhydro-N-acetylmuramic acid kinase BEN71_00735 PF00561 alpha/beta hydrolase fold BEN71_00740 PF01521 Iron-sulphur cluster biosynthesis BEN71_00755 PF07859 alpha/beta hydrolase fold BEN71_00765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEN71_00795 PF07690 Major Facilitator Superfamily BEN71_00810 PF00171 Aldehyde dehydrogenase family BEN71_00815 PF06940 Domain of unknown function (DUF1287) BEN71_00820 PF00209 Sodium:neurotransmitter symporter family BEN71_00830 PF01029 NusB family BEN71_00830 PF01189 16S rRNA methyltransferase RsmB/F BEN71_00835 PF00551 Formyl transferase BEN71_00835 PF02911 Formyl transferase, C-terminal domain BEN71_00845 PF03895 YadA-like membrane anchor domain BEN71_00845 PF05658 Head domain of trimeric autotransporter adhesin BEN71_00845 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN71_00845 PF05658 Head domain of trimeric autotransporter adhesin BEN71_00845 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN71_00845 PF13018 Extended Signal Peptide of Type V secretion system BEN71_00845 PF13018 Extended Signal Peptide of Type V secretion system BEN71_00845 PF03895 YadA-like membrane anchor domain BEN71_00845 PF13018 Extended Signal Peptide of Type V secretion system BEN71_00845 PF03895 YadA-like membrane anchor domain BEN71_00845 PF05658 Head domain of trimeric autotransporter adhesin BEN71_00845 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN71_00850 PF01389 OmpA-like transmembrane domain BEN71_00850 PF00691 OmpA family BEN71_00855 PF00920 Dehydratase family BEN71_00880 PF03466 LysR substrate binding domain BEN71_00880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_00885 PF04221 RelB antitoxin BEN71_00890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN71_00895 PF01252 Signal peptidase (SPase) II BEN71_00900 PF06827 Zinc finger found in FPG and IleRS BEN71_00900 PF08264 Anticodon-binding domain of tRNA BEN71_00900 PF00133 tRNA synthetases class I (I, L, M and V) BEN71_00905 PF01687 Riboflavin kinase BEN71_00905 PF06574 FAD synthetase BEN71_00915 PF00860 Permease family BEN71_00920 PF00311 Phosphoenolpyruvate carboxylase BEN71_00925 PF00440 Bacterial regulatory proteins, tetR family BEN71_00925 PF08361 MAATS-type transcriptional repressor, C-terminal region BEN71_00930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN71_00935 PF00873 AcrB/AcrD/AcrF family BEN71_00945 PF00684 DnaJ central domain BEN71_00945 PF01556 DnaJ C terminal domain BEN71_00945 PF00226 DnaJ domain BEN71_00960 PF01113 Dihydrodipicolinate reductase, N-terminus BEN71_00960 PF05173 Dihydrodipicolinate reductase, C-terminus BEN71_00970 PF07690 Major Facilitator Superfamily BEN71_00975 PF00248 Aldo/keto reductase family BEN71_00980 PF03466 LysR substrate binding domain BEN71_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_00990 PF00155 Aminotransferase class I and II BEN71_00995 PF00107 Zinc-binding dehydrogenase BEN71_00995 PF08240 Alcohol dehydrogenase GroES-like domain BEN71_01000 PF03352 Methyladenine glycosylase BEN71_01010 PF01551 Peptidase family M23 BEN71_01015 PF10576 Iron-sulfur binding domain of endonuclease III BEN71_01015 PF00633 Helix-hairpin-helix motif BEN71_01015 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN71_01015 PF14815 NUDIX domain BEN71_01020 PF01230 HIT domain BEN71_01030 PF07043 Protein of unknown function (DUF1328) BEN71_01035 PF07043 Protein of unknown function (DUF1328) BEN71_01040 PF03692 Putative zinc- or iron-chelating domain BEN71_01045 PF00756 Putative esterase BEN71_01050 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_01050 PF16193 AAA C-terminal domain BEN71_01050 PF12002 MgsA AAA+ ATPase C terminal BEN71_01055 PF03009 Glycerophosphoryl diester phosphodiesterase family BEN71_01060 PF01380 SIS domain BEN71_01065 PF12804 MobA-like NTP transferase domain BEN71_01065 PF14602 Hexapeptide repeat of succinyl-transferase BEN71_01065 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_01070 PF04608 Phosphatidylglycerophosphatase A BEN71_01075 PF00586 AIR synthase related protein, N-terminal domain BEN71_01075 PF02769 AIR synthase related protein, C-terminal domain BEN71_01080 PF01029 NusB family BEN71_01085 PF00885 6,7-dimethyl-8-ribityllumazine synthase BEN71_01090 PF00925 GTP cyclohydrolase II BEN71_01090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEN71_01115 PF02580 D-Tyr-tRNA(Tyr) deacylase BEN71_01130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BEN71_01130 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BEN71_01135 PF00581 Rhodanese-like domain BEN71_01140 PF02666 Phosphatidylserine decarboxylase BEN71_01145 PF11808 Phosphate regulon sensor protein PhoR BEN71_01145 PF00512 His Kinase A (phospho-acceptor) domain BEN71_01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_01145 PF00989 PAS fold BEN71_01150 PF00072 Response regulator receiver domain BEN71_01150 PF00486 Transcriptional regulatory protein, C terminal BEN71_01160 PF00106 short chain dehydrogenase BEN71_01170 PF01554 MatE BEN71_01175 PF00155 Aminotransferase class I and II BEN71_01190 PF00145 C-5 cytosine-specific DNA methylase BEN71_01190 PF12728 Helix-turn-helix domain BEN71_01200 PF04286 Protein of unknown function (DUF445) BEN71_01210 PF01872 RibD C-terminal domain BEN71_01225 PF04262 Glutamate-cysteine ligase BEN71_01230 PF02600 Disulfide bond formation protein DsbB BEN71_01245 PF05728 Uncharacterised protein family (UPF0227) BEN71_01250 PF01751 Toprim domain BEN71_01250 PF00986 DNA gyrase B subunit, carboxyl terminus BEN71_01250 PF00204 DNA gyrase B BEN71_01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_01290 PF00990 Diguanylate cyclase, GGDEF domain BEN71_01300 PF07859 alpha/beta hydrolase fold BEN71_01310 PF03960 ArsC family BEN71_01315 PF03372 Endonuclease/Exonuclease/phosphatase family BEN71_01320 PF00156 Phosphoribosyl transferase domain BEN71_01340 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BEN71_01340 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BEN71_01345 PF04101 Glycosyltransferase family 28 C-terminal domain BEN71_01345 PF03033 Glycosyltransferase family 28 N-terminal domain BEN71_01350 PF08245 Mur ligase middle domain BEN71_01350 PF01225 Mur ligase family, catalytic domain BEN71_01350 PF02875 Mur ligase family, glutamate ligase domain BEN71_01355 PF07478 D-ala D-ala ligase C-terminus BEN71_01355 PF01820 D-ala D-ala ligase N-terminus BEN71_01360 PF08478 POTRA domain, FtsQ-type BEN71_01360 PF03799 Cell division protein FtsQ BEN71_01365 PF02491 SHS2 domain inserted in FTSA BEN71_01370 PF12327 FtsZ family, C-terminal domain BEN71_01370 PF00091 Tubulin/FtsZ family, GTPase domain BEN71_01375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BEN71_01390 PF00456 Transketolase, thiamine diphosphate binding domain BEN71_01390 PF17831 Pyruvate dehydrogenase E1 component middle domain BEN71_01395 PF00364 Biotin-requiring enzyme BEN71_01395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN71_01395 PF02817 e3 binding domain BEN71_01400 PF01169 Uncharacterized protein family UPF0016 BEN71_01405 PF01613 Flavin reductase like domain BEN71_01405 PF00258 Flavodoxin BEN71_01410 PF03692 Putative zinc- or iron-chelating domain BEN71_01415 PF00571 CBS domain BEN71_01415 PF00478 IMP dehydrogenase / GMP reductase domain BEN71_01420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN71_01420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN71_01420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN71_01420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN71_01425 PF01243 Pyridoxamine 5'-phosphate oxidase BEN71_01425 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BEN71_01430 PF17768 RecJ OB domain BEN71_01430 PF02272 DHHA1 domain BEN71_01430 PF01368 DHH family BEN71_01435 PF03551 Transcriptional regulator PadR-like family BEN71_01460 PF03055 Retinal pigment epithelial membrane protein BEN71_01470 PF02678 Pirin BEN71_01470 PF05726 Pirin C-terminal cupin domain BEN71_01480 PF00043 Glutathione S-transferase, C-terminal domain BEN71_01480 PF02798 Glutathione S-transferase, N-terminal domain BEN71_01485 PF00561 alpha/beta hydrolase fold BEN71_01490 PF12833 Helix-turn-helix domain BEN71_01495 PF00892 EamA-like transporter family BEN71_01500 PF11799 impB/mucB/samB family C-terminal domain BEN71_01500 PF11798 IMS family HHH motif BEN71_01500 PF00817 impB/mucB/samB family BEN71_01510 PF01183 Glycosyl hydrolases family 25 BEN71_01520 PF07690 Major Facilitator Superfamily BEN71_01540 PF02581 Thiamine monophosphate synthase BEN71_01540 PF03070 TENA/THI-4/PQQC family BEN71_01540 PF08543 Phosphomethylpyrimidine kinase BEN71_01550 PF07690 Major Facilitator Superfamily BEN71_01555 PF00436 Single-strand binding protein family BEN71_01575 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN71_01575 PF00578 AhpC/TSA family BEN71_01580 PF02678 Pirin BEN71_01580 PF05726 Pirin C-terminal cupin domain BEN71_01585 PF01593 Flavin containing amine oxidoreductase BEN71_01620 PF02705 K+ potassium transporter BEN71_01635 PF00230 Major intrinsic protein BEN71_01650 PF04362 Bacterial Fe(2+) trafficking BEN71_01655 PF00206 Lyase BEN71_01655 PF14698 Argininosuccinate lyase C-terminal BEN71_01660 PF07694 5TMR of 5TMR-LYT BEN71_01660 PF06580 Histidine kinase BEN71_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_01665 PF00072 Response regulator receiver domain BEN71_01665 PF04397 LytTr DNA-binding domain BEN71_01670 PF03900 Porphobilinogen deaminase, C-terminal domain BEN71_01670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BEN71_01695 PF00816 H-NS histone family BEN71_01710 PF00263 Bacterial type II and III secretion system protein BEN71_01710 PF03958 Bacterial type II/III secretion system short domain BEN71_01715 PF16697 Inner membrane component of T3SS, cytoplasmic domain BEN71_01720 PF13419 Haloacid dehalogenase-like hydrolase BEN71_01725 PF00425 chorismate binding enzyme BEN71_01725 PF04715 Anthranilate synthase component I, N terminal region BEN71_01750 PF03144 Elongation factor Tu domain 2 BEN71_01750 PF03143 Elongation factor Tu C-terminal domain BEN71_01750 PF00009 Elongation factor Tu GTP binding domain BEN71_01760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BEN71_01765 PF00467 KOW motif BEN71_01765 PF02357 Transcription termination factor nusG BEN71_01770 PF00298 Ribosomal protein L11, RNA binding domain BEN71_01770 PF03946 Ribosomal protein L11, N-terminal domain BEN71_01775 PF00687 Ribosomal protein L1p/L10e family BEN71_01780 PF00466 Ribosomal protein L10 BEN71_01785 PF16320 Ribosomal protein L7/L12 dimerisation domain BEN71_01785 PF00542 Ribosomal protein L7/L12 C-terminal domain BEN71_01790 PF04565 RNA polymerase Rpb2, domain 3 BEN71_01790 PF10385 RNA polymerase beta subunit external 1 domain BEN71_01790 PF00562 RNA polymerase Rpb2, domain 6 BEN71_01790 PF04563 RNA polymerase beta subunit BEN71_01790 PF04561 RNA polymerase Rpb2, domain 2 BEN71_01790 PF04560 RNA polymerase Rpb2, domain 7 BEN71_01795 PF04998 RNA polymerase Rpb1, domain 5 BEN71_01795 PF04983 RNA polymerase Rpb1, domain 3 BEN71_01795 PF04997 RNA polymerase Rpb1, domain 1 BEN71_01795 PF05000 RNA polymerase Rpb1, domain 4 BEN71_01795 PF00623 RNA polymerase Rpb1, domain 2 BEN71_01815 PF00561 alpha/beta hydrolase fold BEN71_01820 PF13726 Na+-H+ antiporter family BEN71_01820 PF03553 Na+/H+ antiporter family BEN71_01840 PF00183 Hsp90 protein BEN71_01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_01855 PF04185 Phosphoesterase family BEN71_01855 PF05506 Domain of unknown function (DUF756) BEN71_01860 PF01323 DSBA-like thioredoxin domain BEN71_01885 PF02803 Thiolase, C-terminal domain BEN71_01885 PF00108 Thiolase, N-terminal domain BEN71_01890 PF00378 Enoyl-CoA hydratase/isomerase BEN71_01890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN71_01890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN71_01905 PF10431 C-terminal, D2-small domain, of ClpB protein BEN71_01905 PF07724 AAA domain (Cdc48 subfamily) BEN71_01910 PF08459 UvrC Helix-hairpin-helix N-terminal BEN71_01910 PF02151 UvrB/uvrC motif BEN71_01910 PF01541 GIY-YIG catalytic domain BEN71_01920 PF01066 CDP-alcohol phosphatidyltransferase BEN71_01945 PF02789 Cytosol aminopeptidase family, N-terminal domain BEN71_01945 PF00883 Cytosol aminopeptidase family, catalytic domain BEN71_01950 PF03739 Lipopolysaccharide export system permease LptF/LptG BEN71_01955 PF03739 Lipopolysaccharide export system permease LptF/LptG BEN71_01960 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BEN71_01960 PF01676 Metalloenzyme superfamily BEN71_01965 PF03572 Peptidase family S41 BEN71_01965 PF00595 PDZ domain BEN71_01970 PF02954 Bacterial regulatory protein, Fis family BEN71_01970 PF00158 Sigma-54 interaction domain BEN71_01970 PF00072 Response regulator receiver domain BEN71_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_01975 PF00512 His Kinase A (phospho-acceptor) domain BEN71_01975 PF00989 PAS fold BEN71_01975 PF13188 PAS domain BEN71_01975 PF13426 PAS domain BEN71_01980 PF00196 Bacterial regulatory proteins, luxR family BEN71_01980 PF00072 Response regulator receiver domain BEN71_01985 PF00768 D-alanyl-D-alanine carboxypeptidase BEN71_01990 PF00291 Pyridoxal-phosphate dependent enzyme BEN71_01995 PF01842 ACT domain BEN71_01995 PF00742 Homoserine dehydrogenase BEN71_01995 PF03447 Homoserine dehydrogenase, NAD binding domain BEN71_02000 PF10411 Disulfide bond isomerase protein N-terminus BEN71_02000 PF13098 Thioredoxin-like domain BEN71_02005 PF02899 Phage integrase, N-terminal SAM-like domain BEN71_02005 PF00589 Phage integrase family BEN71_02015 PF07670 Nucleoside recognition BEN71_02015 PF07664 Ferrous iron transport protein B C terminus BEN71_02015 PF02421 Ferrous iron transport protein B BEN71_02025 PF00005 ABC transporter BEN71_02025 PF00664 ABC transporter transmembrane region BEN71_02040 PF02525 Flavodoxin-like fold BEN71_02050 PF04632 Fusaric acid resistance protein family BEN71_02060 PF13533 Biotin-lipoyl like BEN71_02070 PF03652 Holliday junction resolvase BEN71_02075 PF02622 Uncharacterized ACR, COG1678 BEN71_02100 PF02463 RecF/RecN/SMC N terminal domain BEN71_02110 PF06865 Pyrimidine/purine nucleoside phosphorylase BEN71_02115 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN71_02115 PF00588 SpoU rRNA Methylase family BEN71_02125 PF01121 Dephospho-CoA kinase BEN71_02130 PF01478 Type IV leader peptidase family BEN71_02130 PF06750 Bacterial Peptidase A24 N-terminal domain BEN71_02135 PF00482 Type II secretion system (T2SS), protein F BEN71_02140 PF00437 Type II/IV secretion system protein BEN71_02140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BEN71_02145 PF00121 Triosephosphate isomerase BEN71_02150 PF03840 Preprotein translocase SecG subunit BEN71_02175 PF17384 RimP C-terminal SH3 domain BEN71_02175 PF02576 RimP N-terminal domain BEN71_02180 PF13184 NusA-like KH domain BEN71_02180 PF08529 NusA N-terminal domain BEN71_02180 PF00575 S1 RNA binding domain BEN71_02190 PF02033 Ribosome-binding factor A BEN71_02200 PF04011 LemA family BEN71_02205 PF04536 TPM domain BEN71_02215 PF07963 Prokaryotic N-terminal methylation motif BEN71_02215 PF00114 Pilin (bacterial filament) BEN71_02225 PF00535 Glycosyl transferase family 2 BEN71_02230 PF00005 ABC transporter BEN71_02230 PF00664 ABC transporter transmembrane region BEN71_02240 PF00535 Glycosyl transferase family 2 BEN71_02245 PF00535 Glycosyl transferase family 2 BEN71_02255 PF03275 UDP-galactopyranose mutase BEN71_02265 PF02350 UDP-N-acetylglucosamine 2-epimerase BEN71_02270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN71_02270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN71_02270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN71_02275 PF00114 Pilin (bacterial filament) BEN71_02275 PF07963 Prokaryotic N-terminal methylation motif BEN71_02280 PF15864 Protein glycosylation ligase BEN71_02280 PF04932 O-Antigen ligase BEN71_02280 PF11846 Virulence factor membrane-bound polymerase, C-terminal BEN71_02285 PF00210 Ferritin-like domain BEN71_02290 PF04324 BFD-like [2Fe-2S] binding domain BEN71_02295 PF01042 Endoribonuclease L-PSP BEN71_02300 PF04607 Region found in RelA / SpoT proteins BEN71_02300 PF02824 TGS domain BEN71_02300 PF13291 ACT domain BEN71_02305 PF01192 RNA polymerase Rpb6 BEN71_02310 PF00625 Guanylate kinase BEN71_02315 PF02401 LytB protein BEN71_02345 PF00114 Pilin (bacterial filament) BEN71_02345 PF07963 Prokaryotic N-terminal methylation motif BEN71_02355 PF00886 Ribosomal protein S16 BEN71_02360 PF05239 PRC-barrel domain BEN71_02360 PF01782 RimM N-terminal domain BEN71_02365 PF01746 tRNA (Guanine-1)-methyltransferase BEN71_02370 PF01245 Ribosomal protein L19 BEN71_02375 PF00561 alpha/beta hydrolase fold BEN71_02380 PF00561 alpha/beta hydrolase fold BEN71_02385 PF00561 alpha/beta hydrolase fold BEN71_02390 PF03280 Proteobacterial lipase chaperone protein BEN71_02395 PF01509 TruB family pseudouridylate synthase (N terminal domain) BEN71_02395 PF16198 tRNA pseudouridylate synthase B C-terminal domain BEN71_02395 PF09157 Pseudouridine synthase II TruB, C-terminal BEN71_02400 PF01925 Sulfite exporter TauE/SafE BEN71_02405 PF01494 FAD binding domain BEN71_02420 PF03109 ABC1 family BEN71_02430 PF01209 ubiE/COQ5 methyltransferase family BEN71_02440 PF03976 Polyphosphate kinase 2 (PPK2) BEN71_02450 PF17946 RecC C-terminal domain BEN71_02455 PF12705 PD-(D/E)XK nuclease superfamily BEN71_02455 PF00580 UvrD/REP helicase N-terminal domain BEN71_02455 PF13361 UvrD-like helicase C-terminal domain BEN71_02460 PF13538 UvrD-like helicase C-terminal domain BEN71_02470 PF00312 Ribosomal protein S15 BEN71_02475 PF03725 3' exoribonuclease family, domain 2 BEN71_02475 PF00575 S1 RNA binding domain BEN71_02475 PF00013 KH domain BEN71_02475 PF01138 3' exoribonuclease family, domain 1 BEN71_02475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BEN71_02485 PF01544 CorA-like Mg2+ transporter protein BEN71_02500 PF00226 DnaJ domain BEN71_02500 PF01556 DnaJ C terminal domain BEN71_02510 PF01430 Hsp33 protein BEN71_02515 PF00999 Sodium/hydrogen exchanger family BEN71_02515 PF02254 TrkA-N domain BEN71_02520 PF01209 ubiE/COQ5 methyltransferase family BEN71_02540 PF08241 Methyltransferase domain BEN71_02565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN71_02565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN71_02600 PF05746 DALR anticodon binding domain BEN71_02600 PF02092 Glycyl-tRNA synthetase beta subunit BEN71_02605 PF02091 Glycyl-tRNA synthetase alpha subunit BEN71_02620 PF00939 Sodium:sulfate symporter transmembrane region BEN71_02630 PF00571 CBS domain BEN71_02635 PF04024 PspC domain BEN71_02660 PF00501 AMP-binding enzyme BEN71_02660 PF13193 AMP-binding enzyme C-terminal domain BEN71_02665 PF10150 Ribonuclease E/G family BEN71_02665 PF00575 S1 RNA binding domain BEN71_02665 PF12111 Polyribonucleotide phosphorylase C terminal BEN71_02670 PF01479 S4 domain BEN71_02670 PF00849 RNA pseudouridylate synthase BEN71_02675 PF13419 Haloacid dehalogenase-like hydrolase BEN71_02680 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEN71_02685 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN71_02685 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BEN71_02690 PF00682 HMGL-like BEN71_02690 PF07836 DmpG-like communication domain BEN71_02700 PF07687 Peptidase dimerisation domain BEN71_02700 PF01546 Peptidase family M20/M25/M40 BEN71_02705 PF03573 outer membrane porin, OprD family BEN71_02710 PF00561 alpha/beta hydrolase fold BEN71_02715 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BEN71_02720 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BEN71_02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_02730 PF03466 LysR substrate binding domain BEN71_02735 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BEN71_02735 PF00355 Rieske [2Fe-2S] domain BEN71_02740 PF00866 Ring hydroxylating beta subunit BEN71_02745 PF00355 Rieske [2Fe-2S] domain BEN71_02750 PF00106 short chain dehydrogenase BEN71_02755 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN71_02760 PF14759 Reductase C-terminal BEN71_02760 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_02765 PF13673 Acetyltransferase (GNAT) domain BEN71_02775 PF12706 Beta-lactamase superfamily domain BEN71_02795 PF04134 Protein of unknown function, DUF393 BEN71_02800 PF00141 Peroxidase BEN71_02805 PF12833 Helix-turn-helix domain BEN71_02820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_02820 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_02820 PF18158 Adaptive response protein AidB N-terminal domain BEN71_02840 PF01590 GAF domain BEN71_02840 PF05524 PEP-utilising enzyme, N-terminal BEN71_02840 PF00391 PEP-utilising enzyme, mobile domain BEN71_02840 PF02896 PEP-utilising enzyme, TIM barrel domain BEN71_02845 PF00293 NUDIX domain BEN71_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_02860 PF03466 LysR substrate binding domain BEN71_02880 PF00330 Aconitase family (aconitate hydratase) BEN71_02885 PF00694 Aconitase C-terminal domain BEN71_02895 PF00180 Isocitrate/isopropylmalate dehydrogenase BEN71_02910 PF01176 Translation initiation factor 1A / IF-1 BEN71_02920 PF01416 tRNA pseudouridine synthase BEN71_02925 PF00710 Asparaginase, N-terminal BEN71_02925 PF17763 Glutaminase/Asparaginase C-terminal domain BEN71_02940 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEN71_02940 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN71_02970 PF03279 Bacterial lipid A biosynthesis acyltransferase BEN71_02975 PF01661 Macro domain BEN71_03005 PF01131 DNA topoisomerase BEN71_03005 PF01751 Toprim domain BEN71_03005 PF08272 Topoisomerase I zinc-ribbon-like BEN71_03005 PF01396 Topoisomerase DNA binding C4 zinc finger BEN71_03030 PF02595 Glycerate kinase family BEN71_03040 PF13361 UvrD-like helicase C-terminal domain BEN71_03040 PF00580 UvrD/REP helicase N-terminal domain BEN71_03065 PF07963 Prokaryotic N-terminal methylation motif BEN71_03065 PF00114 Pilin (bacterial filament) BEN71_03085 PF00999 Sodium/hydrogen exchanger family BEN71_03085 PF02254 TrkA-N domain BEN71_03090 PF00471 Ribosomal protein L33 BEN71_03095 PF00830 Ribosomal L28 family BEN71_03100 PF00171 Aldehyde dehydrogenase family BEN71_03105 PF08360 QacR-like protein, C-terminal region BEN71_03105 PF00440 Bacterial regulatory proteins, tetR family BEN71_03110 PF01842 ACT domain BEN71_03110 PF00551 Formyl transferase BEN71_03120 PF01618 MotA/TolQ/ExbB proton channel family BEN71_03130 PF01625 Peptide methionine sulfoxide reductase BEN71_03135 PF00753 Metallo-beta-lactamase superfamily BEN71_03135 PF04273 Putative phosphatase (DUF442) BEN71_03145 PF00085 Thioredoxin BEN71_03150 PF03061 Thioesterase superfamily BEN71_03165 PF04461 Protein of unknown function (DUF520) BEN71_03175 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BEN71_03175 PF01266 FAD dependent oxidoreductase BEN71_03185 PF03795 YCII-related domain BEN71_03190 PF04279 Intracellular septation protein A BEN71_03195 PF02811 PHP domain BEN71_03205 PF02130 Uncharacterized protein family UPF0054 BEN71_03210 PF02562 PhoH-like protein BEN71_03215 PF04055 Radical SAM superfamily BEN71_03215 PF01938 TRAM domain BEN71_03215 PF00919 Uncharacterized protein family UPF0004 BEN71_03220 PF01551 Peptidase family M23 BEN71_03220 PF10145 Phage-related minor tail protein BEN71_03220 PF01464 Transglycosylase SLT domain BEN71_03230 PF00056 lactate/malate dehydrogenase, NAD binding domain BEN71_03230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BEN71_03255 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BEN71_03260 PF01066 CDP-alcohol phosphatidyltransferase BEN71_03300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN71_03300 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_03320 PF00186 Dihydrofolate reductase BEN71_03325 PF00303 Thymidylate synthase BEN71_03330 PF09234 Domain of unknown function (DUF1963) BEN71_03365 PF01790 Prolipoprotein diacylglyceryl transferase BEN71_03380 PF00902 Sec-independent protein translocase protein (TatC) BEN71_03385 PF02416 mttA/Hcf106 family BEN71_03390 PF02416 mttA/Hcf106 family BEN71_03400 PF01725 Ham1 family BEN71_03405 PF00107 Zinc-binding dehydrogenase BEN71_03405 PF08240 Alcohol dehydrogenase GroES-like domain BEN71_03415 PF07021 Methionine biosynthesis protein MetW BEN71_03415 PF00561 alpha/beta hydrolase fold BEN71_03420 PF00561 alpha/beta hydrolase fold BEN71_03425 PF00682 HMGL-like BEN71_03425 PF08502 LeuA allosteric (dimerisation) domain BEN71_03430 PF01070 FMN-dependent dehydrogenase BEN71_03435 PF13640 2OG-Fe(II) oxygenase superfamily BEN71_03435 PF18331 PKHD-type hydroxylase C-terminal domain BEN71_03440 PF07715 TonB-dependent Receptor Plug Domain BEN71_03440 PF00593 TonB dependent receptor BEN71_03445 PF07715 TonB-dependent Receptor Plug Domain BEN71_03445 PF00593 TonB dependent receptor BEN71_03450 PF07715 TonB-dependent Receptor Plug Domain BEN71_03450 PF00593 TonB dependent receptor BEN71_03455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN71_03455 PF05697 Bacterial trigger factor protein (TF) BEN71_03455 PF05698 Bacterial trigger factor protein (TF) C-terminus BEN71_03460 PF00574 Clp protease BEN71_03465 PF07724 AAA domain (Cdc48 subfamily) BEN71_03465 PF10431 C-terminal, D2-small domain, of ClpB protein BEN71_03465 PF06689 ClpX C4-type zinc finger BEN71_03485 PF05683 Fumarase C-terminus BEN71_03485 PF05681 Fumarate hydratase (Fumerase) BEN71_03515 PF01515 Phosphate acetyl/butaryl transferase BEN71_03515 PF07085 DRTGG domain BEN71_03520 PF00871 Acetokinase family BEN71_03525 PF00171 Aldehyde dehydrogenase family BEN71_03540 PF00933 Glycosyl hydrolase family 3 N terminal domain BEN71_03545 PF03572 Peptidase family S41 BEN71_03545 PF17804 Tail specific protease N-terminal domain BEN71_03545 PF11818 C-terminal domain of tail specific protease (DUF3340) BEN71_03545 PF00595 PDZ domain BEN71_03550 PF00563 EAL domain BEN71_03550 PF00990 Diguanylate cyclase, GGDEF domain BEN71_03550 PF03707 Bacterial signalling protein N terminal repeat BEN71_03555 PF16658 Class II release factor RF3, C-terminal domain BEN71_03555 PF03144 Elongation factor Tu domain 2 BEN71_03555 PF00009 Elongation factor Tu GTP binding domain BEN71_03565 PF11738 Protein of unknown function (DUF3298) BEN71_03565 PF13739 Deacetylase PdaC BEN71_03565 PF01522 Polysaccharide deacetylase BEN71_03570 PF01026 TatD related DNase BEN71_03575 PF00899 ThiF family BEN71_03585 PF01207 Dihydrouridine synthase (Dus) BEN71_03620 PF07690 Major Facilitator Superfamily BEN71_03630 PF09278 MerR, DNA binding BEN71_03630 PF00376 MerR family regulatory protein BEN71_03635 PF17676 LD-carboxypeptidase C-terminal domain BEN71_03635 PF02016 LD-carboxypeptidase N-terminal domain BEN71_03645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BEN71_03645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEN71_03650 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BEN71_03655 PF02233 NAD(P) transhydrogenase beta subunit BEN71_03665 PF07549 SecD/SecF GG Motif BEN71_03665 PF02355 Protein export membrane protein BEN71_03670 PF13721 SecD export protein N-terminal TM region BEN71_03670 PF02355 Protein export membrane protein BEN71_03670 PF07549 SecD/SecF GG Motif BEN71_03675 PF02699 Preprotein translocase subunit BEN71_03680 PF01702 Queuine tRNA-ribosyltransferase BEN71_03710 PF02547 Queuosine biosynthesis protein BEN71_03805 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BEN71_03810 PF01555 DNA methylase BEN71_03810 PF18273 Type III R-M EcoP15I C-terminal domain BEN71_03845 PF02661 Fic/DOC family BEN71_03845 PF13784 Fic/DOC family N-terminal BEN71_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_03850 PF00512 His Kinase A (phospho-acceptor) domain BEN71_03850 PF09456 RcsC Alpha-Beta-Loop (ABL) BEN71_03850 PF00072 Response regulator receiver domain BEN71_03855 PF03710 Glutamate-ammonia ligase adenylyltransferase BEN71_03855 PF08335 GlnD PII-uridylyltransferase BEN71_03860 PF01063 Amino-transferase class IV BEN71_03865 PF01370 NAD dependent epimerase/dehydratase family BEN71_03870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN71_03870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN71_03880 PF17103 Stealth protein CR4, conserved region 4 BEN71_03880 PF17101 Stealth protein CR1, conserved region 1 BEN71_03880 PF17102 Stealth protein CR3, conserved region 3 BEN71_03880 PF11380 Stealth protein CR2, conserved region 2 BEN71_03915 PF01336 OB-fold nucleic acid binding domain BEN71_03915 PF00152 tRNA synthetases class II (D, K and N) BEN71_03915 PF02938 GAD domain BEN71_03925 PF00593 TonB dependent receptor BEN71_03925 PF07715 TonB-dependent Receptor Plug Domain BEN71_03945 PF06146 Phosphate-starvation-inducible E BEN71_03955 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_03955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_03955 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN71_03955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_03960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_03960 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN71_03960 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_03960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_03965 PF00501 AMP-binding enzyme BEN71_03965 PF13193 AMP-binding enzyme C-terminal domain BEN71_03970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN71_03970 PF12833 Helix-turn-helix domain BEN71_03975 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal BEN71_03975 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal BEN71_03980 PF01565 FAD binding domain BEN71_03980 PF04030 D-arabinono-1,4-lactone oxidase BEN71_03990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN71_03990 PF03129 Anticodon binding domain BEN71_03990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN71_03990 PF02824 TGS domain BEN71_03995 PF05198 Translation initiation factor IF-3, N-terminal domain BEN71_03995 PF00707 Translation initiation factor IF-3, C-terminal domain BEN71_04000 PF02798 Glutathione S-transferase, N-terminal domain BEN71_04000 PF00043 Glutathione S-transferase, C-terminal domain BEN71_04010 PF09335 SNARE associated Golgi protein BEN71_04030 PF01632 Ribosomal protein L35 BEN71_04035 PF00453 Ribosomal protein L20 BEN71_04070 PF01409 tRNA synthetases class II core domain (F) BEN71_04070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BEN71_04075 PF03484 tRNA synthetase B5 domain BEN71_04075 PF03483 B3/4 domain BEN71_04075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BEN71_04075 PF03147 Ferredoxin-fold anticodon binding domain BEN71_04075 PF01588 Putative tRNA binding domain BEN71_04080 PF00216 Bacterial DNA-binding protein BEN71_04090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN71_04090 PF07498 Rho termination factor, N-terminal domain BEN71_04090 PF07497 Rho termination factor, RNA-binding domain BEN71_04095 PF00085 Thioredoxin BEN71_04100 PF02541 Ppx/GppA phosphatase family BEN71_04105 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BEN71_04110 PF01171 PP-loop family BEN71_04110 PF11734 TilS substrate C-terminal domain BEN71_04110 PF09179 TilS substrate binding domain BEN71_04115 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEN71_04115 PF03807 NADP oxidoreductase coenzyme F420-dependent BEN71_04120 PF02325 YGGT family BEN71_04130 PF01612 3'-5' exonuclease BEN71_04130 PF00476 DNA polymerase family A BEN71_04130 PF01367 5'-3' exonuclease, C-terminal SAM fold BEN71_04130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEN71_04140 PF02803 Thiolase, C-terminal domain BEN71_04140 PF00108 Thiolase, N-terminal domain BEN71_04145 PF00114 Pilin (bacterial filament) BEN71_04145 PF07963 Prokaryotic N-terminal methylation motif BEN71_04150 PF13505 Outer membrane protein beta-barrel domain BEN71_04150 PF00691 OmpA family BEN71_04155 PF13505 Outer membrane protein beta-barrel domain BEN71_04155 PF00691 OmpA family BEN71_04165 PF01139 tRNA-splicing ligase RtcB BEN71_04170 PF00324 Amino acid permease BEN71_04175 PF08468 Methyltransferase small domain N-terminal BEN71_04175 PF05175 Methyltransferase small domain BEN71_04180 PF00860 Permease family BEN71_04195 PF01741 Large-conductance mechanosensitive channel, MscL BEN71_04215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BEN71_04215 PF06827 Zinc finger found in FPG and IleRS BEN71_04215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BEN71_04220 PF04966 Carbohydrate-selective porin, OprB family BEN71_04225 PF00593 TonB dependent receptor BEN71_04225 PF07715 TonB-dependent Receptor Plug Domain BEN71_04230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN71_04245 PF10411 Disulfide bond isomerase protein N-terminus BEN71_04245 PF13098 Thioredoxin-like domain BEN71_04255 PF01300 Telomere recombination BEN71_04260 PF04315 Elongation factor P hydroxylase BEN71_04265 PF02620 Large ribosomal RNA subunit accumulation protein YceD BEN71_04270 PF01783 Ribosomal L32p protein family BEN71_04275 PF00698 Acyl transferase domain BEN71_04285 PF00550 Phosphopantetheine attachment site BEN71_04290 PF04972 BON domain BEN71_04290 PF01476 LysM domain BEN71_04295 PF00578 AhpC/TSA family BEN71_04295 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN71_04300 PF02810 SEC-C motif BEN71_04300 PF07517 SecA DEAD-like domain BEN71_04300 PF01043 SecA preprotein cross-linking domain BEN71_04300 PF07516 SecA Wing and Scaffold domain BEN71_04310 PF01960 ArgJ family BEN71_04315 PF02445 Quinolinate synthetase A protein BEN71_04345 PF00990 Diguanylate cyclase, GGDEF domain BEN71_04345 PF17152 Periplasmic sensor domain BEN71_04400 PF00268 Ribonucleotide reductase, small chain BEN71_04410 PF03477 ATP cone domain BEN71_04410 PF00317 Ribonucleotide reductase, all-alpha domain BEN71_04410 PF02867 Ribonucleotide reductase, barrel domain BEN71_04415 PF00486 Transcriptional regulatory protein, C terminal BEN71_04415 PF00072 Response regulator receiver domain BEN71_04420 PF00672 HAMP domain BEN71_04420 PF00512 His Kinase A (phospho-acceptor) domain BEN71_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_04430 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BEN71_04435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BEN71_04440 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BEN71_04440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BEN71_04450 PF10531 SLBB domain BEN71_04450 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BEN71_04450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BEN71_04455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEN71_04455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEN71_04455 PF00384 Molybdopterin oxidoreductase BEN71_04460 PF00146 NADH dehydrogenase BEN71_04465 PF12838 4Fe-4S dicluster domain BEN71_04470 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BEN71_04475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN71_04480 PF00361 Proton-conducting membrane transporter BEN71_04480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN71_04485 PF00361 Proton-conducting membrane transporter BEN71_04490 PF00361 Proton-conducting membrane transporter BEN71_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_04515 PF03466 LysR substrate binding domain BEN71_04520 PF00175 Oxidoreductase NAD-binding domain BEN71_04520 PF00970 Oxidoreductase FAD-binding domain BEN71_04535 PF05552 Conserved TM helix BEN71_04550 PF13533 Biotin-lipoyl like BEN71_04560 PF00440 Bacterial regulatory proteins, tetR family BEN71_04560 PF08361 MAATS-type transcriptional repressor, C-terminal region BEN71_04580 PF06100 MCRA family BEN71_04595 PF00005 ABC transporter BEN71_04600 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_04605 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_04610 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEN71_04615 PF04963 Sigma-54 factor, core binding domain BEN71_04615 PF04552 Sigma-54, DNA binding domain BEN71_04615 PF00309 Sigma-54 factor, Activator interacting domain (AID) BEN71_04620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BEN71_04625 PF01722 BolA-like protein BEN71_04630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN71_04635 PF01634 ATP phosphoribosyltransferase BEN71_04640 PF00815 Histidinol dehydrogenase BEN71_04645 PF00155 Aminotransferase class I and II BEN71_04650 PF00425 chorismate binding enzyme BEN71_04650 PF04715 Anthranilate synthase component I, N terminal region BEN71_04690 PF00293 NUDIX domain BEN71_04695 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_04700 PF00814 Glycoprotease family BEN71_04705 PF02673 Bacitracin resistance protein BacA BEN71_04710 PF04445 Putative SAM-dependent methyltransferase BEN71_04725 PF00756 Putative esterase BEN71_04760 PF05987 Bacterial protein of unknown function (DUF898) BEN71_04775 PF00834 Ribulose-phosphate 3 epimerase family BEN71_04785 PF00394 Multicopper oxidase BEN71_04785 PF07731 Multicopper oxidase BEN71_04785 PF07732 Multicopper oxidase BEN71_04800 PF00893 Small Multidrug Resistance protein BEN71_04805 PF00893 Small Multidrug Resistance protein BEN71_04810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEN71_04810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN71_04815 PF08378 Nuclease-related domain BEN71_04825 PF02581 Thiamine monophosphate synthase BEN71_04825 PF03070 TENA/THI-4/PQQC family BEN71_04825 PF08543 Phosphomethylpyrimidine kinase BEN71_04830 PF13419 Haloacid dehalogenase-like hydrolase BEN71_04845 PF01037 Lrp/AsnC ligand binding domain BEN71_04850 PF01266 FAD dependent oxidoreductase BEN71_04855 PF01168 Alanine racemase, N-terminal domain BEN71_04855 PF00842 Alanine racemase, C-terminal domain BEN71_04860 PF01042 Endoribonuclease L-PSP BEN71_04865 PF00324 Amino acid permease BEN71_04870 PF01757 Acyltransferase family BEN71_04875 PF09346 SMI1 / KNR4 family (SUKH-1) BEN71_04885 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN71_04885 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN71_04900 PF00164 Ribosomal protein S12/S23 BEN71_04905 PF00177 Ribosomal protein S7p/S5e BEN71_04915 PF00009 Elongation factor Tu GTP binding domain BEN71_04915 PF14492 Elongation Factor G, domain II BEN71_04915 PF03764 Elongation factor G, domain IV BEN71_04915 PF03144 Elongation factor Tu domain 2 BEN71_04915 PF00679 Elongation factor G C-terminus BEN71_04920 PF03143 Elongation factor Tu C-terminal domain BEN71_04920 PF00009 Elongation factor Tu GTP binding domain BEN71_04920 PF03144 Elongation factor Tu domain 2 BEN71_04930 PF00583 Acetyltransferase (GNAT) family BEN71_04935 PF04377 Arginine-tRNA-protein transferase, C terminus BEN71_04935 PF04376 Arginine-tRNA-protein transferase, N terminus BEN71_04940 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BEN71_04945 PF13847 Methyltransferase domain BEN71_04945 PF10119 Predicted methyltransferase regulatory domain BEN71_04950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_04955 PF01580 FtsK/SpoIIIE family BEN71_04955 PF09397 Ftsk gamma domain BEN71_04955 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BEN71_04955 PF17854 FtsK alpha domain BEN71_04965 PF01553 Acyltransferase BEN71_04980 PF01145 SPFH domain / Band 7 family BEN71_04980 PF15975 Flotillin BEN71_04985 PF07290 Protein of unknown function (DUF1449) BEN71_04995 PF03781 Sulfatase-modifying factor enzyme 1 BEN71_05000 PF00884 Sulfatase BEN71_05005 PF01521 Iron-sulphur cluster biosynthesis BEN71_05005 PF01106 NifU-like domain BEN71_05010 PF00593 TonB dependent receptor BEN71_05010 PF07715 TonB-dependent Receptor Plug Domain BEN71_05020 PF00561 alpha/beta hydrolase fold BEN71_05025 PF00484 Carbonic anhydrase BEN71_05040 PF00324 Amino acid permease BEN71_05045 PF04303 PrpF protein BEN71_05055 PF00348 Polyprenyl synthetase BEN71_05060 PF00474 Sodium:solute symporter family BEN71_05065 PF01145 SPFH domain / Band 7 family BEN71_05075 PF01734 Patatin-like phospholipase BEN71_05085 PF07690 Major Facilitator Superfamily BEN71_05090 PF00884 Sulfatase BEN71_05090 PF08019 Phosphoethanolamine transferase EptA/EptB BEN71_05095 PF00072 Response regulator receiver domain BEN71_05095 PF00486 Transcriptional regulatory protein, C terminal BEN71_05100 PF08521 Two-component sensor kinase N-terminal BEN71_05100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_05100 PF00512 His Kinase A (phospho-acceptor) domain BEN71_05110 PF00909 Ammonium Transporter Family BEN71_05125 PF02637 GatB domain BEN71_05125 PF02934 GatB/GatE catalytic domain BEN71_05130 PF01425 Amidase BEN71_05135 PF02686 Glu-tRNAGln amidotransferase C subunit BEN71_05145 PF04085 rod shape-determining protein MreC BEN71_05150 PF04093 rod shape-determining protein MreD BEN71_05155 PF02545 Maf-like protein BEN71_05160 PF10150 Ribonuclease E/G family BEN71_05160 PF00575 S1 RNA binding domain BEN71_05165 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BEN71_05165 PF06974 Protein of unknown function (DUF1298) BEN71_05170 PF01507 Phosphoadenosine phosphosulfate reductase family BEN71_05180 PF13472 GDSL-like Lipase/Acylhydrolase family BEN71_05185 PF00005 ABC transporter BEN71_05195 PF09335 SNARE associated Golgi protein BEN71_05210 PF17932 Tetracyclin repressor-like, C-terminal domain BEN71_05210 PF00440 Bacterial regulatory proteins, tetR family BEN71_05220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEN71_05235 PF02261 Aspartate decarboxylase BEN71_05240 PF01195 Peptidyl-tRNA hydrolase BEN71_05245 PF01386 Ribosomal L25p family BEN71_05250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BEN71_05250 PF14572 Phosphoribosyl synthetase-associated domain BEN71_05275 PF08544 GHMP kinases C terminal BEN71_05275 PF00288 GHMP kinases N terminal domain BEN71_05280 PF03550 Outer membrane lipoprotein LolB BEN71_05290 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BEN71_05290 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BEN71_05290 PF01488 Shikimate / quinate 5-dehydrogenase BEN71_05300 PF10410 DnaB-helicase binding domain of primase BEN71_05300 PF08278 DNA primase DnaG DnaB-binding BEN71_05300 PF01807 CHC2 zinc finger BEN71_05300 PF08275 DNA primase catalytic core, N-terminal domain BEN71_05305 PF13525 Outer membrane lipoprotein BEN71_05310 PF01479 S4 domain BEN71_05310 PF00849 RNA pseudouridylate synthase BEN71_05325 PF03358 NADPH-dependent FMN reductase BEN71_05345 PF01668 SmpB protein BEN71_05350 PF01467 Cytidylyltransferase-like BEN71_05355 PF00037 4Fe-4S binding domain BEN71_05380 PF09423 PhoD-like phosphatase BEN71_05380 PF16655 PhoD-like phosphatase, N-terminal domain BEN71_05420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEN71_05420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEN71_05435 PF00083 Sugar (and other) transporter BEN71_05440 PF08220 DeoR-like helix-turn-helix domain BEN71_05440 PF00455 DeoR C terminal sensor domain BEN71_05445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BEN71_05445 PF01266 FAD dependent oxidoreductase BEN71_05455 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BEN71_05455 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BEN71_05460 PF00781 Diacylglycerol kinase catalytic domain BEN71_05470 PF00166 Chaperonin 10 Kd subunit BEN71_05475 PF00118 TCP-1/cpn60 chaperonin family BEN71_05480 PF12833 Helix-turn-helix domain BEN71_05485 PF07690 Major Facilitator Superfamily BEN71_05495 PF07702 UTRA domain BEN71_05495 PF00392 Bacterial regulatory proteins, gntR family BEN71_05505 PF08402 TOBE domain BEN71_05505 PF00005 ABC transporter BEN71_05510 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_05515 PF01266 FAD dependent oxidoreductase BEN71_05520 PF00266 Aminotransferase class-V BEN71_05525 PF13419 Haloacid dehalogenase-like hydrolase BEN71_05535 PF01219 Prokaryotic diacylglycerol kinase BEN71_05540 PF03009 Glycerophosphoryl diester phosphodiesterase family BEN71_05545 PF00873 AcrB/AcrD/AcrF family BEN71_05550 PF00571 CBS domain BEN71_05550 PF03448 MgtE intracellular N domain BEN71_05550 PF01769 Divalent cation transporter BEN71_05590 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN71_05590 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN71_05595 PF01784 NIF3 (NGG1p interacting factor 3) BEN71_05600 PF13180 PDZ domain BEN71_05610 PF18073 Rubredoxin metal binding domain BEN71_05615 PF01235 Sodium:alanine symporter family BEN71_05620 PF00324 Amino acid permease BEN71_05630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEN71_05630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEN71_05635 PF01678 Diaminopimelate epimerase BEN71_05650 PF02190 ATP-dependent protease La (LON) substrate-binding domain BEN71_05650 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_05650 PF05362 Lon protease (S16) C-terminal proteolytic domain BEN71_05655 PF01812 5-formyltetrahydrofolate cyclo-ligase family BEN71_05660 PF13737 Transposase DDE domain BEN71_05675 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family BEN71_05690 PF00324 Amino acid permease BEN71_05705 PF00324 Amino acid permease BEN71_05715 PF00929 Exonuclease BEN71_05720 PF01979 Amidohydrolase family BEN71_05735 PF01435 Peptidase family M48 BEN71_05740 PF01464 Transglycosylase SLT domain BEN71_05745 PF01171 PP-loop family BEN71_05755 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEN71_05755 PF01464 Transglycosylase SLT domain BEN71_05760 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN71_05760 PF03449 Transcription elongation factor, N-terminal BEN71_05815 PF02661 Fic/DOC family BEN71_05830 PF02384 N-6 DNA Methylase BEN71_05835 PF01420 Type I restriction modification DNA specificity domain BEN71_05905 PF00245 Alkaline phosphatase BEN71_05910 PF00245 Alkaline phosphatase BEN71_05920 PF12833 Helix-turn-helix domain BEN71_05920 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN71_05925 PF00990 Diguanylate cyclase, GGDEF domain BEN71_05925 PF00072 Response regulator receiver domain BEN71_05935 PF02333 Phytase BEN71_05940 PF01618 MotA/TolQ/ExbB proton channel family BEN71_05945 PF02472 Biopolymer transport protein ExbD/TolR BEN71_05960 PF00196 Bacterial regulatory proteins, luxR family BEN71_05980 PF12146 Serine aminopeptidase, S33 BEN71_05985 PF02803 Thiolase, C-terminal domain BEN71_05985 PF00108 Thiolase, N-terminal domain BEN71_05990 PF01144 Coenzyme A transferase BEN71_05995 PF01144 Coenzyme A transferase BEN71_06000 PF02426 Muconolactone delta-isomerase BEN71_06005 PF13378 Enolase C-terminal domain-like BEN71_06005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEN71_06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_06010 PF03466 LysR substrate binding domain BEN71_06015 PF01926 50S ribosome-binding GTPase BEN71_06020 PF01926 50S ribosome-binding GTPase BEN71_06025 PF04444 Catechol dioxygenase N terminus BEN71_06025 PF00775 Dioxygenase BEN71_06030 PF03594 Benzoate membrane transport protein BEN71_06045 PF00106 short chain dehydrogenase BEN71_06055 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN71_06055 PF00970 Oxidoreductase FAD-binding domain BEN71_06055 PF00175 Oxidoreductase NAD-binding domain BEN71_06060 PF00866 Ring hydroxylating beta subunit BEN71_06065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BEN71_06065 PF00355 Rieske [2Fe-2S] domain BEN71_06070 PF03466 LysR substrate binding domain BEN71_06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_06075 PF07690 Major Facilitator Superfamily BEN71_06080 PF00360 Phytochrome region BEN71_06080 PF00990 Diguanylate cyclase, GGDEF domain BEN71_06080 PF01590 GAF domain BEN71_06080 PF00563 EAL domain BEN71_06085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN71_06085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN71_06085 PF11890 Domain of unknown function (DUF3410) BEN71_06090 PF00152 tRNA synthetases class II (D, K and N) BEN71_06115 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN71_06115 PF01743 Poly A polymerase head domain BEN71_06120 PF01515 Phosphate acetyl/butaryl transferase BEN71_06120 PF03949 Malic enzyme, NAD binding domain BEN71_06120 PF00390 Malic enzyme, N-terminal domain BEN71_06125 PF00563 EAL domain BEN71_06125 PF00990 Diguanylate cyclase, GGDEF domain BEN71_06125 PF03707 Bacterial signalling protein N terminal repeat BEN71_06130 PF04452 RNA methyltransferase BEN71_06135 PF02219 Methylenetetrahydrofolate reductase BEN71_06140 PF05221 S-adenosyl-L-homocysteine hydrolase BEN71_06140 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BEN71_06175 PF03971 Monomeric isocitrate dehydrogenase BEN71_06180 PF03061 Thioesterase superfamily BEN71_06200 PF00849 RNA pseudouridylate synthase BEN71_06205 PF00180 Isocitrate/isopropylmalate dehydrogenase BEN71_06225 PF00764 Arginosuccinate synthase BEN71_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_06240 PF03466 LysR substrate binding domain BEN71_06245 PF00892 EamA-like transporter family BEN71_06250 PF02652 L-lactate permease BEN71_06255 PF00392 Bacterial regulatory proteins, gntR family BEN71_06255 PF07729 FCD domain BEN71_06260 PF01070 FMN-dependent dehydrogenase BEN71_06265 PF09330 D-lactate dehydrogenase, membrane binding BEN71_06265 PF01565 FAD binding domain BEN71_06280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN71_06280 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_06295 PF01144 Coenzyme A transferase BEN71_06300 PF01144 Coenzyme A transferase BEN71_06320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN71_06325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_06325 PF03466 LysR substrate binding domain BEN71_06330 PF00665 Integrase core domain BEN71_06330 PF13936 Helix-turn-helix domain BEN71_06335 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BEN71_06340 PF01494 FAD binding domain BEN71_06375 PF03695 Uncharacterised protein family (UPF0149) BEN71_06380 PF05195 Aminopeptidase P, N-terminal domain BEN71_06380 PF00557 Metallopeptidase family M24 BEN71_06390 PF01494 FAD binding domain BEN71_06395 PF01494 FAD binding domain BEN71_06410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEN71_06420 PF02021 Uncharacterised protein family UPF0102 BEN71_06425 PF04972 BON domain BEN71_06430 PF00135 Carboxylesterase family BEN71_06435 PF00293 NUDIX domain BEN71_06435 PF09297 NADH pyrophosphatase zinc ribbon domain BEN71_06445 PF00929 Exonuclease BEN71_06450 PF01476 LysM domain BEN71_06450 PF01464 Transglycosylase SLT domain BEN71_06455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEN71_06460 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_06465 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_06465 PF12911 N-terminal TM domain of oligopeptide transport permease C BEN71_06470 PF00005 ABC transporter BEN71_06470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEN71_06480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN71_06480 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_06490 PF05726 Pirin C-terminal cupin domain BEN71_06490 PF02678 Pirin BEN71_06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_06495 PF03466 LysR substrate binding domain BEN71_06520 PF00557 Metallopeptidase family M24 BEN71_06525 PF00318 Ribosomal protein S2 BEN71_06530 PF00889 Elongation factor TS BEN71_06575 PF03330 Lytic transglycolase BEN71_06575 PF05036 Sporulation related domain BEN71_06580 PF13406 Transglycosylase SLT domain BEN71_06585 PF01098 Cell cycle protein BEN71_06595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BEN71_06595 PF14489 QueF-like protein BEN71_06600 PF01061 ABC-2 type transporter BEN71_06605 PF00005 ABC transporter BEN71_06635 PF00375 Sodium:dicarboxylate symporter family BEN71_06640 PF00472 RF-1 domain BEN71_06645 PF01018 GTP1/OBG BEN71_06645 PF01926 50S ribosome-binding GTPase BEN71_06650 PF00696 Amino acid kinase family BEN71_06650 PF01472 PUA domain BEN71_06665 PF07759 Protein of unknown function (DUF1615) BEN71_06670 PF00005 ABC transporter BEN71_06675 PF00486 Transcriptional regulatory protein, C terminal BEN71_06675 PF00072 Response regulator receiver domain BEN71_06685 PF07690 Major Facilitator Superfamily BEN71_06690 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_06690 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEN71_06690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN71_06690 PF13806 Rieske-like [2Fe-2S] domain BEN71_06690 PF04324 BFD-like [2Fe-2S] binding domain BEN71_06690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN71_06695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN71_06695 PF04324 BFD-like [2Fe-2S] binding domain BEN71_06695 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEN71_06695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN71_06695 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_06700 PF01568 Molydopterin dinucleotide binding domain BEN71_06700 PF00384 Molybdopterin oxidoreductase BEN71_06700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEN71_06700 PF04324 BFD-like [2Fe-2S] binding domain BEN71_06705 PF12804 MobA-like NTP transferase domain BEN71_06710 PF04055 Radical SAM superfamily BEN71_06710 PF06463 Molybdenum Cofactor Synthesis C BEN71_06720 PF02391 MoaE protein BEN71_06725 PF00994 Probable molybdopterin binding domain BEN71_06725 PF01967 MoaC family BEN71_06730 PF00994 Probable molybdopterin binding domain BEN71_06730 PF03453 MoeA N-terminal region (domain I and II) BEN71_06730 PF03454 MoeA C-terminal region (domain IV) BEN71_06740 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_06745 PF07715 TonB-dependent Receptor Plug Domain BEN71_06745 PF00593 TonB dependent receptor BEN71_06750 PF16220 Domain of unknown function (DUF4880) BEN71_06750 PF04773 FecR protein BEN71_06775 PF13533 Biotin-lipoyl like BEN71_06780 PF00873 AcrB/AcrD/AcrF family BEN71_06785 PF00873 AcrB/AcrD/AcrF family BEN71_06790 PF02321 Outer membrane efflux protein BEN71_06800 PF01207 Dihydrouridine synthase (Dus) BEN71_06810 PF03060 Nitronate monooxygenase BEN71_06820 PF00589 Phage integrase family BEN71_06985 PF04860 Phage portal protein BEN71_07095 PF00959 Phage lysozyme BEN71_07120 PF01596 O-methyltransferase BEN71_07140 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN71_07140 PF00578 AhpC/TSA family BEN71_07155 PF11898 Domain of unknown function (DUF3418) BEN71_07155 PF04408 Helicase associated domain (HA2) BEN71_07155 PF00271 Helicase conserved C-terminal domain BEN71_07155 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BEN71_07155 PF00270 DEAD/DEAH box helicase BEN71_07160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN71_07160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEN71_07185 PF13195 Protein of unknown function (DUF4011) BEN71_07185 PF13087 AAA domain BEN71_07185 PF13086 AAA domain BEN71_07185 PF13195 Protein of unknown function (DUF4011) BEN71_07185 PF13087 AAA domain BEN71_07185 PF13086 AAA domain BEN71_07200 PF05860 haemagglutination activity domain BEN71_07205 PF08479 POTRA domain, ShlB-type BEN71_07205 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BEN71_07205 PF17287 POTRA domain BEN71_07210 PF00440 Bacterial regulatory proteins, tetR family BEN71_07215 PF00743 Flavin-binding monooxygenase-like BEN71_07220 PF00106 short chain dehydrogenase BEN71_07225 PF01810 LysE type translocator BEN71_07235 PF02687 FtsX-like permease family BEN71_07235 PF12704 MacB-like periplasmic core domain BEN71_07240 PF00005 ABC transporter BEN71_07245 PF00753 Metallo-beta-lactamase superfamily BEN71_07245 PF13567 Domain of unknown function (DUF4131) BEN71_07245 PF03772 Competence protein BEN71_07255 PF06965 Na+/H+ antiporter 1 BEN71_07255 PF01343 Peptidase family S49 BEN71_07270 PF00551 Formyl transferase BEN71_07275 PF02769 AIR synthase related protein, C-terminal domain BEN71_07275 PF00586 AIR synthase related protein, N-terminal domain BEN71_07280 PF01594 AI-2E family transporter BEN71_07285 PF11638 DnaA N-terminal domain BEN71_07285 PF08299 Bacterial dnaA protein helix-turn-helix BEN71_07285 PF00308 Bacterial dnaA protein BEN71_07305 PF05816 Toxic anion resistance protein (TelA) BEN71_07320 PF13192 Thioredoxin domain BEN71_07320 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_07330 PF02525 Flavodoxin-like fold BEN71_07335 PF03466 LysR substrate binding domain BEN71_07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_07340 PF00037 4Fe-4S binding domain BEN71_07350 PF01022 Bacterial regulatory protein, arsR family BEN71_07355 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN71_07360 PF01758 Sodium Bile acid symporter family BEN71_07365 PF03358 NADPH-dependent FMN reductase BEN71_07370 PF00175 Oxidoreductase NAD-binding domain BEN71_07370 PF00970 Oxidoreductase FAD-binding domain BEN71_07375 PF01980 tRNA-methyltransferase O BEN71_07375 PF18389 TrmO C-terminal domain BEN71_07400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN71_07400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEN71_07415 PF05368 NmrA-like family BEN71_07420 PF01638 HxlR-like helix-turn-helix BEN71_07435 PF00206 Lyase BEN71_07435 PF08328 Adenylosuccinate lyase C-terminal BEN71_07440 PF04356 Protein of unknown function (DUF489) BEN71_07450 PF00293 NUDIX domain BEN71_07470 PF01343 Peptidase family S49 BEN71_07470 PF08496 Peptidase family S49 N-terminal BEN71_07475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_07475 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_07475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_07480 PF01965 DJ-1/PfpI family BEN71_07485 PF01817 Chorismate mutase type II BEN71_07485 PF01842 ACT domain BEN71_07485 PF00800 Prephenate dehydratase BEN71_07490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN71_07505 PF01137 RNA 3'-terminal phosphate cyclase BEN71_07505 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain BEN71_07530 PF01139 tRNA-splicing ligase RtcB BEN71_07535 PF00753 Metallo-beta-lactamase superfamily BEN71_07540 PF00158 Sigma-54 interaction domain BEN71_07540 PF06956 Regulator of RNA terminal phosphate cyclase BEN71_07550 PF03883 Peroxide stress protein YaaA BEN71_07560 PF02581 Thiamine monophosphate synthase BEN71_07565 PF00202 Aminotransferase class-III BEN71_07620 PF00717 Peptidase S24-like BEN71_07635 PF00596 Class II Aldolase and Adducin N-terminal domain BEN71_07640 PF02678 Pirin BEN71_07640 PF17954 Quercetinase C-terminal cupin domain BEN71_07650 PF01208 Uroporphyrinogen decarboxylase (URO-D) BEN71_07655 PF05675 Protein of unknown function (DUF817) BEN71_07675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_07675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_07675 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_07680 PF00106 short chain dehydrogenase BEN71_07725 PF00218 Indole-3-glycerol phosphate synthase BEN71_07730 PF00591 Glycosyl transferase family, a/b domain BEN71_07730 PF02885 Glycosyl transferase family, helical bundle domain BEN71_07735 PF00117 Glutamine amidotransferase class-I BEN71_07775 PF00588 SpoU rRNA Methylase family BEN71_07775 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN71_07780 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BEN71_07790 PF00691 OmpA family BEN71_07795 PF04052 TolB amino-terminal domain BEN71_07795 PF07676 WD40-like Beta Propeller Repeat BEN71_07810 PF02472 Biopolymer transport protein ExbD/TolR BEN71_07815 PF01618 MotA/TolQ/ExbB proton channel family BEN71_07820 PF03061 Thioesterase superfamily BEN71_07830 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEN71_07830 PF05491 RuvB C-terminal winged helix domain BEN71_07830 PF17864 RuvB AAA lid domain BEN71_07835 PF07499 RuvA, C-terminal domain BEN71_07835 PF01330 RuvA N terminal domain BEN71_07845 PF01966 HD domain BEN71_07860 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BEN71_07860 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BEN71_07860 PF02769 AIR synthase related protein, C-terminal domain BEN71_07870 PF00375 Sodium:dicarboxylate symporter family BEN71_07885 PF13533 Biotin-lipoyl like BEN71_07905 PF00266 Aminotransferase class-V BEN71_07915 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BEN71_07925 PF05726 Pirin C-terminal cupin domain BEN71_07925 PF02678 Pirin BEN71_07930 PF00296 Luciferase-like monooxygenase BEN71_07935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_07935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN71_07940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN71_07940 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_07940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_07945 PF00106 short chain dehydrogenase BEN71_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_07950 PF03466 LysR substrate binding domain BEN71_07960 PF08360 QacR-like protein, C-terminal region BEN71_07960 PF00440 Bacterial regulatory proteins, tetR family BEN71_07965 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN71_07965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_07965 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_07965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_07970 PF00108 Thiolase, N-terminal domain BEN71_07970 PF02803 Thiolase, C-terminal domain BEN71_07975 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEN71_07975 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEN71_07980 PF09190 DALR domain BEN71_07980 PF01406 tRNA synthetases class I (C) catalytic domain BEN71_07985 PF01380 SIS domain BEN71_07985 PF00571 CBS domain BEN71_08000 PF03968 OstA-like protein BEN71_08005 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEN71_08005 PF00005 ABC transporter BEN71_08020 PF01205 Uncharacterized protein family UPF0029 BEN71_08035 PF01596 O-methyltransferase BEN71_08050 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_08055 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_08060 PF00005 ABC transporter BEN71_08065 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_08070 PF07943 Penicillin-binding protein 5, C-terminal domain BEN71_08070 PF00768 D-alanyl-D-alanine carboxypeptidase BEN71_08085 PF01975 Survival protein SurE BEN71_08090 PF01551 Peptidase family M23 BEN71_08090 PF01476 LysM domain BEN71_08095 PF03466 LysR substrate binding domain BEN71_08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_08100 PF00202 Aminotransferase class-III BEN71_08105 PF00462 Glutaredoxin BEN71_08110 PF05362 Lon protease (S16) C-terminal proteolytic domain BEN71_08110 PF13654 AAA domain BEN71_08115 PF07690 Major Facilitator Superfamily BEN71_08120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN71_08125 PF13593 SBF-like CPA transporter family (DUF4137) BEN71_08130 PF01197 Ribosomal protein L31 BEN71_08145 PF04055 Radical SAM superfamily BEN71_08150 PF01132 Elongation factor P (EF-P) OB domain BEN71_08150 PF08207 Elongation factor P (EF-P) KOW-like domain BEN71_08150 PF09285 Elongation factor P, C-terminal BEN71_08155 PF13722 5TM C-terminal transporter carbon starvation CstA BEN71_08155 PF02554 Carbon starvation protein CstA BEN71_08160 PF04328 Selenoprotein, putative BEN71_08165 PF07726 ATPase family associated with various cellular activities (AAA) BEN71_08165 PF17863 AAA lid domain BEN71_08175 PF13737 Transposase DDE domain BEN71_08185 PF01841 Transglutaminase-like superfamily BEN71_08185 PF11992 Domain of unknown function (DUF3488) BEN71_08185 PF13559 Domain of unknown function (DUF4129) BEN71_08195 PF12833 Helix-turn-helix domain BEN71_08195 PF14525 AraC-binding-like domain BEN71_08205 PF00202 Aminotransferase class-III BEN71_08210 PF00324 Amino acid permease BEN71_08215 PF00171 Aldehyde dehydrogenase family BEN71_08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_08220 PF03466 LysR substrate binding domain BEN71_08225 PF01979 Amidohydrolase family BEN71_08225 PF13382 Adenine deaminase C-terminal domain BEN71_08245 PF00860 Permease family BEN71_08250 PF00962 Adenosine/AMP deaminase BEN71_08260 PF01292 Prokaryotic cytochrome b561 BEN71_08270 PF01351 Ribonuclease HII BEN71_08275 PF02599 Global regulator protein family BEN71_08280 PF13840 ACT domain BEN71_08280 PF01842 ACT domain BEN71_08280 PF00696 Amino acid kinase family BEN71_08285 PF02272 DHHA1 domain BEN71_08285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN71_08285 PF01411 tRNA synthetases class II (A) BEN71_08310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN71_08310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEN71_08330 PF01037 Lrp/AsnC ligand binding domain BEN71_08340 PF13393 Histidyl-tRNA synthetase BEN71_08345 PF00709 Adenylosuccinate synthetase BEN71_08360 PF00248 Aldo/keto reductase family BEN71_08365 PF00027 Cyclic nucleotide-binding domain BEN71_08365 PF13545 Crp-like helix-turn-helix domain BEN71_08370 PF02566 OsmC-like protein BEN71_08380 PF00266 Aminotransferase class-V BEN71_08395 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_08400 PF02861 Clp amino terminal domain, pathogenicity island component BEN71_08400 PF07724 AAA domain (Cdc48 subfamily) BEN71_08400 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_08400 PF17871 AAA lid domain BEN71_08400 PF10431 C-terminal, D2-small domain, of ClpB protein BEN71_08405 PF13302 Acetyltransferase (GNAT) domain BEN71_08420 PF01170 Putative RNA methylase family UPF0020 BEN71_08420 PF10672 S-adenosylmethionine-dependent methyltransferase BEN71_08420 PF02926 THUMP domain BEN71_08440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN71_08440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN71_08445 PF01979 Amidohydrolase family BEN71_08475 PF00155 Aminotransferase class I and II BEN71_08475 PF00392 Bacterial regulatory proteins, gntR family BEN71_08485 PF02390 Putative methyltransferase BEN71_08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_08495 PF07730 Histidine kinase BEN71_08495 PF05231 MASE1 BEN71_08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_08500 PF05231 MASE1 BEN71_08500 PF07730 Histidine kinase BEN71_08505 PF00196 Bacterial regulatory proteins, luxR family BEN71_08505 PF00072 Response regulator receiver domain BEN71_08510 PF05662 Coiled stalk of trimeric autotransporter adhesin BEN71_08510 PF05658 Head domain of trimeric autotransporter adhesin BEN71_08510 PF03895 YadA-like membrane anchor domain BEN71_08510 PF13018 Extended Signal Peptide of Type V secretion system BEN71_08515 PF02798 Glutathione S-transferase, N-terminal domain BEN71_08515 PF00043 Glutathione S-transferase, C-terminal domain BEN71_08525 PF05690 Thiazole biosynthesis protein ThiG BEN71_08535 PF04241 Protein of unknown function (DUF423) BEN71_08540 PF04542 Sigma-70 region 2 BEN71_08540 PF04545 Sigma-70, region 4 BEN71_08540 PF00140 Sigma-70 factor, region 1.2 BEN71_08550 PF00313 'Cold-shock' DNA-binding domain BEN71_08555 PF00270 DEAD/DEAH box helicase BEN71_08555 PF00271 Helicase conserved C-terminal domain BEN71_08565 PF00881 Nitroreductase family BEN71_08570 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BEN71_08570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BEN71_08590 PF01180 Dihydroorotate dehydrogenase BEN71_08600 PF00156 Phosphoribosyl transferase domain BEN71_08605 PF01435 Peptidase family M48 BEN71_08610 PF06968 Biotin and Thiamin Synthesis associated domain BEN71_08610 PF04055 Radical SAM superfamily BEN71_08615 PF08331 Domain of unknown function (DUF1730) BEN71_08620 PF01256 Carbohydrate kinase BEN71_08620 PF03853 YjeF-related protein N-terminus BEN71_08635 PF02075 Crossover junction endodeoxyribonuclease RuvC BEN71_08650 PF01810 LysE type translocator BEN71_08665 PF00873 AcrB/AcrD/AcrF family BEN71_08670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN71_08675 PF07715 TonB-dependent Receptor Plug Domain BEN71_08675 PF00593 TonB dependent receptor BEN71_08680 PF00155 Aminotransferase class I and II BEN71_08685 PF01909 Nucleotidyltransferase domain BEN71_08685 PF01966 HD domain BEN71_08685 PF08335 GlnD PII-uridylyltransferase BEN71_08690 PF02222 ATP-grasp domain BEN71_08700 PF05437 Branched-chain amino acid transport protein (AzlD) BEN71_08705 PF03591 AzlC protein BEN71_08720 PF00027 Cyclic nucleotide-binding domain BEN71_08720 PF13545 Crp-like helix-turn-helix domain BEN71_08730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN71_08730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN71_08735 PF06071 Protein of unknown function (DUF933) BEN71_08735 PF01926 50S ribosome-binding GTPase BEN71_08745 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_08750 PF00005 ABC transporter BEN71_08750 PF09383 NIL domain BEN71_08755 PF03180 NLPA lipoprotein BEN71_08760 PF03180 NLPA lipoprotein BEN71_08765 PF00296 Luciferase-like monooxygenase BEN71_08795 PF11791 Aconitate B N-terminal domain BEN71_08795 PF06434 Aconitate hydratase 2 N-terminus BEN71_08795 PF00330 Aconitase family (aconitate hydratase) BEN71_08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_08810 PF03466 LysR substrate binding domain BEN71_08820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEN71_08825 PF07690 Major Facilitator Superfamily BEN71_08845 PF01037 Lrp/AsnC ligand binding domain BEN71_08850 PF00324 Amino acid permease BEN71_08855 PF00520 Ion transport protein BEN71_08855 PF00027 Cyclic nucleotide-binding domain BEN71_08865 PF03616 Sodium/glutamate symporter BEN71_08870 PF03466 LysR substrate binding domain BEN71_08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_08880 PF01274 Malate synthase BEN71_08890 PF05114 Protein of unknown function (DUF692) BEN71_08910 PF03471 Transporter associated domain BEN71_08910 PF03741 Integral membrane protein TerC family BEN71_08930 PF05525 Branched-chain amino acid transport protein BEN71_08935 PF00557 Metallopeptidase family M24 BEN71_08940 PF03594 Benzoate membrane transport protein BEN71_08945 PF01810 LysE type translocator BEN71_08950 PF00923 Transaldolase/Fructose-6-phosphate aldolase BEN71_08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_08955 PF03466 LysR substrate binding domain BEN71_08970 PF05970 PIF1-like helicase BEN71_08970 PF14493 Helix-turn-helix domain BEN71_08985 PF02110 Hydroxyethylthiazole kinase family BEN71_09025 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) BEN71_09030 PF08173 Membrane bound YbgT-like protein BEN71_09035 PF02322 Cytochrome bd terminal oxidase subunit II BEN71_09040 PF01654 Cytochrome bd terminal oxidase subunit I BEN71_09050 PF07290 Protein of unknown function (DUF1449) BEN71_09060 PF00294 pfkB family carbohydrate kinase BEN71_09070 PF00293 NUDIX domain BEN71_09085 PF05193 Peptidase M16 inactive domain BEN71_09085 PF00675 Insulinase (Peptidase family M16) BEN71_09085 PF08367 Peptidase M16C associated BEN71_09090 PF02253 Phospholipase A1 BEN71_09095 PF07690 Major Facilitator Superfamily BEN71_09100 PF12802 MarR family BEN71_09105 PF00005 ABC transporter BEN71_09105 PF00664 ABC transporter transmembrane region BEN71_09110 PF01070 FMN-dependent dehydrogenase BEN71_09115 PF02684 Lipid-A-disaccharide synthetase BEN71_09150 PF02954 Bacterial regulatory protein, Fis family BEN71_09150 PF00072 Response regulator receiver domain BEN71_09150 PF00158 Sigma-54 interaction domain BEN71_09155 PF00989 PAS fold BEN71_09155 PF00512 His Kinase A (phospho-acceptor) domain BEN71_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_09160 PF04055 Radical SAM superfamily BEN71_09160 PF00919 Uncharacterized protein family UPF0004 BEN71_09160 PF18693 TRAM domain BEN71_09165 PF00696 Amino acid kinase family BEN71_09170 PF01765 Ribosome recycling factor BEN71_09175 PF01255 Putative undecaprenyl diphosphate synthase BEN71_09185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BEN71_09185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BEN71_09185 PF13288 DXP reductoisomerase C-terminal domain BEN71_09190 PF17820 PDZ domain BEN71_09190 PF02163 Peptidase family M50 BEN71_09190 PF13180 PDZ domain BEN71_09195 PF01103 Surface antigen BEN71_09195 PF07244 Surface antigen variable number repeat BEN71_09205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BEN71_09205 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_09210 PF07977 FabA-like domain BEN71_09215 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_09215 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BEN71_09230 PF02631 RecX family BEN71_09235 PF13193 AMP-binding enzyme C-terminal domain BEN71_09235 PF00501 AMP-binding enzyme BEN71_09240 PF00106 short chain dehydrogenase BEN71_09245 PF00154 recA bacterial DNA recombination protein BEN71_09250 PF01479 S4 domain BEN71_09255 PF13419 Haloacid dehalogenase-like hydrolase BEN71_09260 PF00459 Inositol monophosphatase family BEN71_09275 PF00793 DAHP synthetase I family BEN71_09280 PF01925 Sulfite exporter TauE/SafE BEN71_09290 PF02424 ApbE family BEN71_09300 PF00667 FAD binding domain BEN71_09300 PF00175 Oxidoreductase NAD-binding domain BEN71_09300 PF00258 Flavodoxin BEN71_09315 PF01425 Amidase BEN71_09320 PF00990 Diguanylate cyclase, GGDEF domain BEN71_09330 PF02785 Biotin carboxylase C-terminal domain BEN71_09330 PF00289 Biotin carboxylase, N-terminal domain BEN71_09330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN71_09335 PF00364 Biotin-requiring enzyme BEN71_09340 PF01220 Dehydroquinase class II BEN71_09345 PF11799 impB/mucB/samB family C-terminal domain BEN71_09345 PF00817 impB/mucB/samB family BEN71_09345 PF13438 Domain of unknown function (DUF4113) BEN71_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_09360 PF03466 LysR substrate binding domain BEN71_09365 PF02824 TGS domain BEN71_09365 PF04607 Region found in RelA / SpoT proteins BEN71_09365 PF13291 ACT domain BEN71_09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_09375 PF03466 LysR substrate binding domain BEN71_09380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_09380 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_09380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_09385 PF07690 Major Facilitator Superfamily BEN71_09390 PF02515 CoA-transferase family III BEN71_09395 PF17941 Polyphosphate kinase C-terminal domain 1 BEN71_09395 PF13089 Polyphosphate kinase N-terminal domain BEN71_09395 PF13090 Polyphosphate kinase C-terminal domain 2 BEN71_09395 PF02503 Polyphosphate kinase middle domain BEN71_09405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN71_09405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN71_09410 PF00440 Bacterial regulatory proteins, tetR family BEN71_09420 PF00285 Citrate synthase, C-terminal domain BEN71_09430 PF06480 FtsH Extracellular BEN71_09430 PF17862 AAA+ lid domain BEN71_09430 PF01434 Peptidase family M41 BEN71_09430 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_09445 PF01645 Conserved region in glutamate synthase BEN71_09450 PF09313 Domain of unknown function (DUF1971) BEN71_09450 PF03848 Tellurite resistance protein TehB BEN71_09455 PF08007 Cupin superfamily protein BEN71_09470 PF00271 Helicase conserved C-terminal domain BEN71_09470 PF03461 TRCF domain BEN71_09470 PF02559 CarD-like/TRCF domain BEN71_09470 PF00270 DEAD/DEAH box helicase BEN71_09470 PF17757 UvrB interaction domain BEN71_09480 PF00211 Adenylate and Guanylate cyclase catalytic domain BEN71_09485 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN71_09490 PF00012 Hsp70 protein BEN71_09495 PF00226 DnaJ domain BEN71_09495 PF07743 HSCB C-terminal oligomerisation domain BEN71_09500 PF01521 Iron-sulphur cluster biosynthesis BEN71_09505 PF01592 NifU-like N terminal domain BEN71_09510 PF00266 Aminotransferase class-V BEN71_09515 PF02082 Transcriptional regulator BEN71_09530 PF00216 Bacterial DNA-binding protein BEN71_09535 PF09312 SurA N-terminal domain BEN71_09535 PF00639 PPIC-type PPIASE domain BEN71_09540 PF12833 Helix-turn-helix domain BEN71_09540 PF12852 Cupin BEN71_09545 PF00487 Fatty acid desaturase BEN71_09550 PF01638 HxlR-like helix-turn-helix BEN71_09575 PF13737 Transposase DDE domain BEN71_09605 PF02635 DsrE/DsrF-like family BEN71_09610 PF16363 GDP-mannose 4,6 dehydratase BEN71_09615 PF00206 Lyase BEN71_09615 PF10415 Fumarase C C-terminus BEN71_09655 PF01654 Cytochrome bd terminal oxidase subunit I BEN71_09660 PF02322 Cytochrome bd terminal oxidase subunit II BEN71_09680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_09680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_09680 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_09695 PF00106 short chain dehydrogenase BEN71_09725 PF00892 EamA-like transporter family BEN71_09730 PF00155 Aminotransferase class I and II BEN71_09730 PF00392 Bacterial regulatory proteins, gntR family BEN71_09745 PF13091 PLD-like domain BEN71_09750 PF08240 Alcohol dehydrogenase GroES-like domain BEN71_09750 PF00107 Zinc-binding dehydrogenase BEN71_09760 PF16326 ABC transporter C-terminal domain BEN71_09760 PF00005 ABC transporter BEN71_09760 PF12848 ABC transporter BEN71_09765 PF00155 Aminotransferase class I and II BEN71_09775 PF00593 TonB dependent receptor BEN71_09775 PF07715 TonB-dependent Receptor Plug Domain BEN71_09785 PF00561 alpha/beta hydrolase fold BEN71_09800 PF12832 MFS_1 like family BEN71_09805 PF04172 LrgB-like family BEN71_09810 PF03788 LrgA family BEN71_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_09815 PF03466 LysR substrate binding domain BEN71_09825 PF00486 Transcriptional regulatory protein, C terminal BEN71_09825 PF00072 Response regulator receiver domain BEN71_09830 PF02702 Osmosensitive K+ channel His kinase sensor domain BEN71_09830 PF00512 His Kinase A (phospho-acceptor) domain BEN71_09830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_09830 PF13492 GAF domain BEN71_09830 PF13493 Domain of unknown function (DUF4118) BEN71_09835 PF02669 K+-transporting ATPase, c chain BEN71_09845 PF03814 Potassium-transporting ATPase A subunit BEN71_09855 PF01925 Sulfite exporter TauE/SafE BEN71_09860 PF01613 Flavin reductase like domain BEN71_09865 PF08267 Cobalamin-independent synthase, N-terminal domain BEN71_09865 PF01717 Cobalamin-independent synthase, Catalytic domain BEN71_09875 PF00392 Bacterial regulatory proteins, gntR family BEN71_09875 PF00155 Aminotransferase class I and II BEN71_09885 PF01266 FAD dependent oxidoreductase BEN71_09890 PF00324 Amino acid permease BEN71_09895 PF00892 EamA-like transporter family BEN71_09900 PF00376 MerR family regulatory protein BEN71_09900 PF09278 MerR, DNA binding BEN71_09905 PF00403 Heavy-metal-associated domain BEN71_09915 PF00171 Aldehyde dehydrogenase family BEN71_09920 PF18381 YcaO cyclodehydratase C-terminal domain BEN71_09920 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BEN71_09925 PF00892 EamA-like transporter family BEN71_09940 PF05194 UreE urease accessory protein, C-terminal domain BEN71_09940 PF02814 UreE urease accessory protein, N-terminal domain BEN71_09945 PF00582 Universal stress protein family BEN71_09960 PF02464 Competence-damaged protein BEN71_09960 PF18146 Damage-inducible protein CinA KH domain BEN71_09960 PF00994 Probable molybdopterin binding domain BEN71_09970 PF01264 Chorismate synthase BEN71_09975 PF05175 Methyltransferase small domain BEN71_09995 PF03109 ABC1 family BEN71_10000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_10000 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_10000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_10005 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_10005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_10005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_10010 PF00583 Acetyltransferase (GNAT) family BEN71_10015 PF01575 MaoC like domain BEN71_10020 PF12833 Helix-turn-helix domain BEN71_10020 PF02311 AraC-like ligand binding domain BEN71_10025 PF01597 Glycine cleavage H-protein BEN71_10030 PF00793 DAHP synthetase I family BEN71_10035 PF03707 Bacterial signalling protein N terminal repeat BEN71_10035 PF00990 Diguanylate cyclase, GGDEF domain BEN71_10035 PF00563 EAL domain BEN71_10040 PF00753 Metallo-beta-lactamase superfamily BEN71_10050 PF04143 Sulphur transport BEN71_10075 PF00916 Sulfate permease family BEN71_10075 PF01740 STAS domain BEN71_10080 PF00375 Sodium:dicarboxylate symporter family BEN71_10090 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BEN71_10100 PF02654 Cobalamin-5-phosphate synthase BEN71_10110 PF02277 Phosphoribosyltransferase BEN71_10115 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BEN71_10130 PF07715 TonB-dependent Receptor Plug Domain BEN71_10130 PF00593 TonB dependent receptor BEN71_10135 PF07690 Major Facilitator Superfamily BEN71_10150 PF04183 IucA / IucC family BEN71_10150 PF06276 Ferric iron reductase FhuF-like transporter BEN71_10155 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BEN71_10160 PF04183 IucA / IucC family BEN71_10160 PF06276 Ferric iron reductase FhuF-like transporter BEN71_10180 PF00589 Phage integrase family BEN71_10180 PF13356 Arm DNA-binding domain BEN71_10185 PF00959 Phage lysozyme BEN71_10305 PF04860 Phage portal protein BEN71_10410 PF00717 Peptidase S24-like BEN71_10410 PF01381 Helix-turn-helix BEN71_10460 PF04073 Aminoacyl-tRNA editing domain BEN71_10465 PF01066 CDP-alcohol phosphatidyltransferase BEN71_10470 PF12147 Putative methyltransferase BEN71_10470 PF12146 Serine aminopeptidase, S33 BEN71_10475 PF00782 Dual specificity phosphatase, catalytic domain BEN71_10510 PF03737 Aldolase/RraA BEN71_10515 PF13460 NAD(P)H-binding BEN71_10520 PF01649 Ribosomal protein S20 BEN71_10530 PF02542 YgbB family BEN71_10570 PF03466 LysR substrate binding domain BEN71_10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_10580 PF01116 Fructose-bisphosphate aldolase class-II BEN71_10590 PF00162 Phosphoglycerate kinase BEN71_10600 PF02545 Maf-like protein BEN71_10610 PF13936 Helix-turn-helix domain BEN71_10610 PF00665 Integrase core domain BEN71_10630 PF00118 TCP-1/cpn60 chaperonin family BEN71_10635 PF00166 Chaperonin 10 Kd subunit BEN71_10640 PF03091 CutA1 divalent ion tolerance protein BEN71_10645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEN71_10650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEN71_10660 PF00753 Metallo-beta-lactamase superfamily BEN71_10665 PF00665 Integrase core domain BEN71_10665 PF13936 Helix-turn-helix domain BEN71_10670 PF00291 Pyridoxal-phosphate dependent enzyme BEN71_10675 PF01553 Acyltransferase BEN71_10680 PF08241 Methyltransferase domain BEN71_10680 PF12697 Alpha/beta hydrolase family BEN71_10685 PF17925 Tetracyclin repressor-like, C-terminal domain BEN71_10685 PF00440 Bacterial regulatory proteins, tetR family BEN71_10715 PF00248 Aldo/keto reductase family BEN71_10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_10720 PF03466 LysR substrate binding domain BEN71_10725 PF06865 Pyrimidine/purine nucleoside phosphorylase BEN71_10730 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN71_10730 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BEN71_10735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEN71_10740 PF00149 Calcineurin-like phosphoesterase BEN71_10745 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family BEN71_10750 PF00881 Nitroreductase family BEN71_10760 PF01266 FAD dependent oxidoreductase BEN71_10765 PF01266 FAD dependent oxidoreductase BEN71_10770 PF01098 Cell cycle protein BEN71_10775 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BEN71_10780 PF04977 Septum formation initiator BEN71_10785 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BEN71_10790 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BEN71_10795 PF00113 Enolase, C-terminal TIM barrel domain BEN71_10795 PF03952 Enolase, N-terminal domain BEN71_10800 PF00793 DAHP synthetase I family BEN71_10805 PF06418 CTP synthase N-terminus BEN71_10805 PF00117 Glutamine amidotransferase class-I BEN71_10825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN71_10825 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_10835 PF00561 alpha/beta hydrolase fold BEN71_10840 PF00083 Sugar (and other) transporter BEN71_10875 PF00206 Lyase BEN71_10875 PF10415 Fumarase C C-terminus BEN71_10880 PF00474 Sodium:solute symporter family BEN71_10885 PF01037 Lrp/AsnC ligand binding domain BEN71_10890 PF00171 Aldehyde dehydrogenase family BEN71_10890 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BEN71_10890 PF14850 DNA-binding domain of Proline dehydrogenase BEN71_10890 PF01619 Proline dehydrogenase BEN71_10900 PF00893 Small Multidrug Resistance protein BEN71_10985 PF00959 Phage lysozyme BEN71_11080 PF07030 Protein of unknown function (DUF1320) BEN71_11115 PF06074 Protein of unknown function (DUF935) BEN71_11200 PF01381 Helix-turn-helix BEN71_11200 PF00717 Peptidase S24-like BEN71_11265 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain BEN71_11265 PF00589 Phage integrase family BEN71_11280 PF11940 Domain of unknown function (DUF3458) Ig-like fold BEN71_11280 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BEN71_11280 PF01433 Peptidase family M1 domain BEN71_11290 PF11412 Disulphide bond corrector protein DsbC BEN71_11290 PF02683 Cytochrome C biogenesis protein transmembrane region BEN71_11295 PF00578 AhpC/TSA family BEN71_11300 PF13098 Thioredoxin-like domain BEN71_11310 PF01047 MarR family BEN71_11325 PF00717 Peptidase S24-like BEN71_11335 PF05958 tRNA (Uracil-5-)-methyltransferase BEN71_11350 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BEN71_11355 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_11355 PF07724 AAA domain (Cdc48 subfamily) BEN71_11355 PF10431 C-terminal, D2-small domain, of ClpB protein BEN71_11355 PF02861 Clp amino terminal domain, pathogenicity island component BEN71_11355 PF17871 AAA lid domain BEN71_11360 PF02617 ATP-dependent Clp protease adaptor protein ClpS BEN71_11370 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN71_11370 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEN71_11400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BEN71_11405 PF00291 Pyridoxal-phosphate dependent enzyme BEN71_11405 PF00585 C-terminal regulatory domain of Threonine dehydratase BEN71_11420 PF02254 TrkA-N domain BEN71_11420 PF02080 TrkA-C domain BEN71_11425 PF02386 Cation transport protein BEN71_11430 PF03969 AFG1-like ATPase BEN71_11440 PF00743 Flavin-binding monooxygenase-like BEN71_11445 PF03956 Lysine exporter LysO BEN71_11455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BEN71_11480 PF00216 Bacterial DNA-binding protein BEN71_11485 PF00575 S1 RNA binding domain BEN71_11490 PF02224 Cytidylate kinase BEN71_11500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEN71_11510 PF03167 Uracil DNA glycosylase superfamily BEN71_11520 PF03934 Type II secretion system (T2SS), protein K BEN71_11525 PF07963 Prokaryotic N-terminal methylation motif BEN71_11525 PF11612 Type II secretion system (T2SS), protein J BEN71_11530 PF07963 Prokaryotic N-terminal methylation motif BEN71_11530 PF02501 Type II secretion system (T2SS), protein I BEN71_11545 PF01026 TatD related DNase BEN71_11555 PF09115 DNA polymerase III, delta subunit, C terminal BEN71_11560 PF02348 Cytidylyltransferase BEN71_11565 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BEN71_11570 PF00005 ABC transporter BEN71_11570 PF00664 ABC transporter transmembrane region BEN71_11575 PF02472 Biopolymer transport protein ExbD/TolR BEN71_11580 PF01618 MotA/TolQ/ExbB proton channel family BEN71_11585 PF02195 ParB-like nuclease domain BEN71_11585 PF17762 HTH domain found in ParB protein BEN71_11590 PF13614 AAA domain BEN71_11595 PF02527 rRNA small subunit methyltransferase G BEN71_11600 PF00483 Nucleotidyl transferase BEN71_11605 PF01636 Phosphotransferase enzyme family BEN71_11610 PF04453 LPS transport system D BEN71_11610 PF03968 OstA-like protein BEN71_11615 PF00639 PPIC-type PPIASE domain BEN71_11615 PF09312 SurA N-terminal domain BEN71_11620 PF17209 Hfq protein BEN71_11630 PF08676 MutL C terminal dimerisation domain BEN71_11630 PF01119 DNA mismatch repair protein, C-terminal domain BEN71_11635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BEN71_11640 PF00849 RNA pseudouridylate synthase BEN71_11640 PF01479 S4 domain BEN71_11655 PF01479 S4 domain BEN71_11655 PF00849 RNA pseudouridylate synthase BEN71_11660 PF04284 Protein of unknown function (DUF441) BEN71_11675 PF00448 SRP54-type protein, GTPase domain BEN71_11675 PF02881 SRP54-type protein, helical bundle domain BEN71_11680 PF05193 Peptidase M16 inactive domain BEN71_11680 PF00675 Insulinase (Peptidase family M16) BEN71_11710 PF00571 CBS domain BEN71_11710 PF01380 SIS domain BEN71_11725 PF00291 Pyridoxal-phosphate dependent enzyme BEN71_11735 PF01434 Peptidase family M41 BEN71_11735 PF17862 AAA+ lid domain BEN71_11735 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_11745 PF05166 YcgL domain BEN71_11750 PF00570 HRDC domain BEN71_11750 PF01612 3'-5' exonuclease BEN71_11755 PF02132 RecR protein BEN71_11755 PF13662 Toprim domain BEN71_11760 PF02575 YbaB/EbfC DNA-binding family BEN71_11765 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN71_11775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN71_11775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN71_11785 PF01230 HIT domain BEN71_11840 PF01565 FAD binding domain BEN71_11840 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BEN71_11845 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN71_11850 PF00465 Iron-containing alcohol dehydrogenase BEN71_11860 PF03061 Thioesterase superfamily BEN71_11865 PF12170 DNA polymerase III tau subunit V interacting with alpha BEN71_11865 PF12169 DNA polymerase III subunits gamma and tau domain III BEN71_11865 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BEN71_11870 PF00144 Beta-lactamase BEN71_11885 PF02803 Thiolase, C-terminal domain BEN71_11885 PF00108 Thiolase, N-terminal domain BEN71_11890 PF00465 Iron-containing alcohol dehydrogenase BEN71_11895 PF00106 short chain dehydrogenase BEN71_11905 PF02954 Bacterial regulatory protein, Fis family BEN71_11910 PF00171 Aldehyde dehydrogenase family BEN71_11915 PF03466 LysR substrate binding domain BEN71_11915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_11925 PF01323 DSBA-like thioredoxin domain BEN71_11930 PF00106 short chain dehydrogenase BEN71_11935 PF00440 Bacterial regulatory proteins, tetR family BEN71_11940 PF00117 Glutamine amidotransferase class-I BEN71_11940 PF00958 GMP synthase C terminal domain BEN71_11940 PF02540 NAD synthase BEN71_11955 PF00924 Mechanosensitive ion channel BEN71_11970 PF00456 Transketolase, thiamine diphosphate binding domain BEN71_11970 PF02780 Transketolase, C-terminal domain BEN71_11970 PF02779 Transketolase, pyrimidine binding domain BEN71_11975 PF00563 EAL domain BEN71_11975 PF00990 Diguanylate cyclase, GGDEF domain BEN71_11975 PF03707 Bacterial signalling protein N terminal repeat BEN71_11980 PF02773 S-adenosylmethionine synthetase, C-terminal domain BEN71_11980 PF02772 S-adenosylmethionine synthetase, central domain BEN71_11980 PF00438 S-adenosylmethionine synthetase, N-terminal domain BEN71_11985 PF00255 Glutathione peroxidase BEN71_11990 PF01641 SelR domain BEN71_11995 PF00155 Aminotransferase class I and II BEN71_12000 PF00710 Asparaginase, N-terminal BEN71_12000 PF17763 Glutaminase/Asparaginase C-terminal domain BEN71_12015 PF00814 Glycoprotease family BEN71_12020 PF01165 Ribosomal protein S21 BEN71_12025 PF09424 Yqey-like protein BEN71_12035 PF01435 Peptidase family M48 BEN71_12040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN71_12040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN71_12055 PF13193 AMP-binding enzyme C-terminal domain BEN71_12055 PF00501 AMP-binding enzyme BEN71_12070 PF17243 POTRA domain TamA domain 1 BEN71_12070 PF01103 Surface antigen BEN71_12070 PF07244 Surface antigen variable number repeat BEN71_12075 PF07690 Major Facilitator Superfamily BEN71_12080 PF03232 Ubiquinone biosynthesis protein COQ7 BEN71_12090 PF00106 short chain dehydrogenase BEN71_12100 PF02152 Dihydroneopterin aldolase BEN71_12105 PF03109 ABC1 family BEN71_12110 PF00899 ThiF family BEN71_12125 PF01709 Transcriptional regulator BEN71_12130 PF01553 Acyltransferase BEN71_12140 PF07715 TonB-dependent Receptor Plug Domain BEN71_12140 PF00593 TonB dependent receptor BEN71_12145 PF17954 Quercetinase C-terminal cupin domain BEN71_12145 PF02678 Pirin BEN71_12150 PF13193 AMP-binding enzyme C-terminal domain BEN71_12150 PF00501 AMP-binding enzyme BEN71_12155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_12155 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_12155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_12160 PF00106 short chain dehydrogenase BEN71_12165 PF12833 Helix-turn-helix domain BEN71_12175 PF09084 NMT1/THI5 like BEN71_12180 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_12185 PF01062 Bestrophin, RFP-TM, chloride channel BEN71_12190 PF17827 PrmC N-terminal domain BEN71_12190 PF13847 Methyltransferase domain BEN71_12195 PF00472 RF-1 domain BEN71_12195 PF03462 PCRF domain BEN71_12210 PF00296 Luciferase-like monooxygenase BEN71_12215 PF05360 yiaA/B two helix domain BEN71_12220 PF00743 Flavin-binding monooxygenase-like BEN71_12225 PF03618 Kinase/pyrophosphorylase BEN71_12230 PF00391 PEP-utilising enzyme, mobile domain BEN71_12230 PF02896 PEP-utilising enzyme, TIM barrel domain BEN71_12230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BEN71_12240 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEN71_12240 PF06481 COX Aromatic Rich Motif BEN71_12245 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN71_12250 PF00510 Cytochrome c oxidase subunit III BEN71_12255 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BEN71_12260 PF01040 UbiA prenyltransferase family BEN71_12280 PF01250 Ribosomal protein S6 BEN71_12285 PF01084 Ribosomal protein S18 BEN71_12290 PF01281 Ribosomal protein L9, N-terminal domain BEN71_12290 PF03948 Ribosomal protein L9, C-terminal domain BEN71_12295 PF03796 DnaB-like helicase C terminal domain BEN71_12295 PF00772 DnaB-like helicase N terminal domain BEN71_12310 PF00842 Alanine racemase, C-terminal domain BEN71_12310 PF01168 Alanine racemase, N-terminal domain BEN71_12325 PF01841 Transglutaminase-like superfamily BEN71_12325 PF08379 Bacterial transglutaminase-like N-terminal region BEN71_12335 PF14403 Circularly permuted ATP-grasp type 2 BEN71_12345 PF07690 Major Facilitator Superfamily BEN71_12355 PF07690 Major Facilitator Superfamily BEN71_12365 PF01134 Glucose inhibited division protein A BEN71_12365 PF13932 GidA associated domain BEN71_12390 PF02954 Bacterial regulatory protein, Fis family BEN71_12395 PF01808 AICARFT/IMPCHase bienzyme BEN71_12395 PF02142 MGS-like domain BEN71_12400 PF02843 Phosphoribosylglycinamide synthetase, C domain BEN71_12400 PF02844 Phosphoribosylglycinamide synthetase, N domain BEN71_12400 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BEN71_12410 PF13302 Acetyltransferase (GNAT) domain BEN71_12420 PF03180 NLPA lipoprotein BEN71_12425 PF03180 NLPA lipoprotein BEN71_12430 PF09383 NIL domain BEN71_12430 PF00005 ABC transporter BEN71_12435 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_12450 PF16123 Hydroxyacylglutathione hydrolase C-terminus BEN71_12450 PF00753 Metallo-beta-lactamase superfamily BEN71_12455 PF12146 Serine aminopeptidase, S33 BEN71_12500 PF01336 OB-fold nucleic acid binding domain BEN71_12500 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEN71_12500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEN71_12500 PF02811 PHP domain BEN71_12500 PF14579 Helix-hairpin-helix motif BEN71_12505 PF00588 SpoU rRNA Methylase family BEN71_12510 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_12525 PF00892 EamA-like transporter family BEN71_12555 PF00271 Helicase conserved C-terminal domain BEN71_12555 PF17757 UvrB interaction domain BEN71_12555 PF12344 Ultra-violet resistance protein B BEN71_12555 PF02151 UvrB/uvrC motif BEN71_12555 PF04851 Type III restriction enzyme, res subunit BEN71_12565 PF00990 Diguanylate cyclase, GGDEF domain BEN71_12565 PF00072 Response regulator receiver domain BEN71_12670 PF04717 Type VI secretion system, phage-baseplate injector BEN71_12675 PF02830 V4R domain BEN71_12675 PF02954 Bacterial regulatory protein, Fis family BEN71_12675 PF00158 Sigma-54 interaction domain BEN71_12675 PF06505 Activator of aromatic catabolism BEN71_12680 PF06099 Phenol hydroxylase subunit BEN71_12685 PF02332 Methane/Phenol/Toluene Hydroxylase BEN71_12690 PF02406 MmoB/DmpM family BEN71_12695 PF02332 Methane/Phenol/Toluene Hydroxylase BEN71_12695 PF04945 YHS domain BEN71_12705 PF00970 Oxidoreductase FAD-binding domain BEN71_12705 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN71_12705 PF00175 Oxidoreductase NAD-binding domain BEN71_12715 PF01624 MutS domain I BEN71_12715 PF00488 MutS domain V BEN71_12715 PF05190 MutS family domain IV BEN71_12715 PF05192 MutS domain III BEN71_12715 PF05188 MutS domain II BEN71_12725 PF00037 4Fe-4S binding domain BEN71_12725 PF11953 Domain of unknown function (DUF3470) BEN71_12735 PF00282 Pyridoxal-dependent decarboxylase conserved domain BEN71_12740 PF00202 Aminotransferase class-III BEN71_12750 PF01569 PAP2 superfamily BEN71_12755 PF01925 Sulfite exporter TauE/SafE BEN71_12770 PF00487 Fatty acid desaturase BEN71_12775 PF00175 Oxidoreductase NAD-binding domain BEN71_12775 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN71_12775 PF00970 Oxidoreductase FAD-binding domain BEN71_12780 PF00440 Bacterial regulatory proteins, tetR family BEN71_12785 PF05173 Dihydrodipicolinate reductase, C-terminus BEN71_12785 PF01113 Dihydrodipicolinate reductase, N-terminus BEN71_12795 PF00501 AMP-binding enzyme BEN71_12800 PF00271 Helicase conserved C-terminal domain BEN71_12800 PF12137 RNA polymerase recycling family C-terminal BEN71_12800 PF00176 SNF2 family N-terminal domain BEN71_12800 PF18339 RapA N-terminal Tudor like domain 1 BEN71_12800 PF18337 RapA N-terminal Tudor like domain BEN71_12805 PF00849 RNA pseudouridylate synthase BEN71_12820 PF01011 PQQ enzyme repeat BEN71_12820 PF13360 PQQ-like domain BEN71_12825 PF00248 Aldo/keto reductase family BEN71_12840 PF13411 MerR HTH family regulatory protein BEN71_12845 PF05193 Peptidase M16 inactive domain BEN71_12845 PF00675 Insulinase (Peptidase family M16) BEN71_12850 PF02567 Phenazine biosynthesis-like protein BEN71_12865 PF01613 Flavin reductase like domain BEN71_12880 PF01040 UbiA prenyltransferase family BEN71_12885 PF04345 Chorismate lyase BEN71_12895 PF14760 Rnk N-terminus BEN71_12895 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN71_12900 PF00464 Serine hydroxymethyltransferase BEN71_12925 PF07023 Protein of unknown function (DUF1315) BEN71_12930 PF01513 ATP-NAD kinase BEN71_12935 PF00905 Penicillin binding protein transpeptidase domain BEN71_12935 PF00912 Transglycosylase BEN71_12935 PF14814 Bifunctional transglycosylase second domain BEN71_12945 PF00293 NUDIX domain BEN71_12955 PF00512 His Kinase A (phospho-acceptor) domain BEN71_12955 PF08521 Two-component sensor kinase N-terminal BEN71_12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_12960 PF00486 Transcriptional regulatory protein, C terminal BEN71_12960 PF00072 Response regulator receiver domain BEN71_12970 PF00437 Type II/IV secretion system protein BEN71_12985 PF09615 CRISPR-associated protein (Cas_Csy3) BEN71_12990 PF09614 CRISPR-associated protein (Cas_Csy2) BEN71_12995 PF09611 CRISPR-associated protein (Cas_Csy1) BEN71_13000 PF18019 HD domain BEN71_13005 PF01867 CRISPR associated protein Cas1 BEN71_13010 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_13015 PF08223 PaaX-like protein C-terminal domain BEN71_13015 PF07848 PaaX-like protein BEN71_13020 PF00501 AMP-binding enzyme BEN71_13020 PF14535 AMP-binding enzyme C-terminal domain BEN71_13025 PF02803 Thiolase, C-terminal domain BEN71_13025 PF00108 Thiolase, N-terminal domain BEN71_13030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN71_13030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN71_13030 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BEN71_13035 PF00378 Enoyl-CoA hydratase/isomerase BEN71_13040 PF00378 Enoyl-CoA hydratase/isomerase BEN71_13045 PF00970 Oxidoreductase FAD-binding domain BEN71_13045 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN71_13045 PF00175 Oxidoreductase NAD-binding domain BEN71_13050 PF01883 Iron-sulfur cluster assembly protein BEN71_13055 PF05138 Phenylacetic acid catabolic protein BEN71_13060 PF06243 Phenylacetic acid degradation B BEN71_13065 PF05138 Phenylacetic acid catabolic protein BEN71_13070 PF01575 MaoC like domain BEN71_13070 PF00171 Aldehyde dehydrogenase family BEN71_13075 PF01144 Coenzyme A transferase BEN71_13080 PF01144 Coenzyme A transferase BEN71_13085 PF07690 Major Facilitator Superfamily BEN71_13100 PF00005 ABC transporter BEN71_13105 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEN71_13110 PF01425 Amidase BEN71_13115 PF01402 Ribbon-helix-helix protein, copG family BEN71_13115 PF08753 NikR C terminal nickel binding domain BEN71_13130 PF02785 Biotin carboxylase C-terminal domain BEN71_13130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN71_13130 PF00289 Biotin carboxylase, N-terminal domain BEN71_13145 PF00107 Zinc-binding dehydrogenase BEN71_13145 PF08240 Alcohol dehydrogenase GroES-like domain BEN71_13150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN71_13150 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_13155 PF02817 e3 binding domain BEN71_13155 PF00364 Biotin-requiring enzyme BEN71_13155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN71_13160 PF02780 Transketolase, C-terminal domain BEN71_13160 PF02779 Transketolase, pyrimidine binding domain BEN71_13165 PF00676 Dehydrogenase E1 component BEN71_13170 PF04055 Radical SAM superfamily BEN71_13185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN71_13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_13190 PF04055 Radical SAM superfamily BEN71_13205 PF00768 D-alanyl-D-alanine carboxypeptidase BEN71_13205 PF07943 Penicillin-binding protein 5, C-terminal domain BEN71_13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_13215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN71_13220 PF00875 DNA photolyase BEN71_13220 PF03441 FAD binding domain of DNA photolyase BEN71_13235 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BEN71_13240 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BEN71_13245 PF02565 Recombination protein O C terminal BEN71_13245 PF11967 Recombination protein O N terminal BEN71_13255 PF01926 50S ribosome-binding GTPase BEN71_13255 PF07650 KH domain BEN71_13260 PF14622 Ribonuclease-III-like BEN71_13260 PF00035 Double-stranded RNA binding motif BEN71_13270 PF10502 Signal peptidase, peptidase S26 BEN71_13275 PF00679 Elongation factor G C-terminus BEN71_13275 PF00009 Elongation factor Tu GTP binding domain BEN71_13275 PF03144 Elongation factor Tu domain 2 BEN71_13275 PF06421 GTP-binding protein LepA C-terminus BEN71_13290 PF13180 PDZ domain BEN71_13295 PF00890 FAD binding domain BEN71_13295 PF02910 Fumarate reductase flavoprotein C-term BEN71_13315 PF02223 Thymidylate kinase BEN71_13320 PF02618 YceG-like family BEN71_13325 PF01063 Amino-transferase class IV BEN71_13340 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_13345 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_13350 PF12857 TOBE-like domain BEN71_13350 PF00005 ABC transporter BEN71_13355 PF03466 LysR substrate binding domain BEN71_13355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_13370 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BEN71_13370 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_13370 PF14602 Hexapeptide repeat of succinyl-transferase BEN71_13375 PF04055 Radical SAM superfamily BEN71_13380 PF06508 Queuosine biosynthesis protein QueC BEN71_13395 PF00578 AhpC/TSA family BEN71_13405 PF03466 LysR substrate binding domain BEN71_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_13420 PF00378 Enoyl-CoA hydratase/isomerase BEN71_13430 PF00881 Nitroreductase family BEN71_13440 PF01784 NIF3 (NGG1p interacting factor 3) BEN71_13455 PF13737 Transposase DDE domain BEN71_13460 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN71_13460 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN71_13485 PF01012 Electron transfer flavoprotein domain BEN71_13485 PF00766 Electron transfer flavoprotein FAD-binding domain BEN71_13490 PF01012 Electron transfer flavoprotein domain BEN71_13495 PF01810 LysE type translocator BEN71_13500 PF01037 Lrp/AsnC ligand binding domain BEN71_13505 PF13302 Acetyltransferase (GNAT) domain BEN71_13510 PF13302 Acetyltransferase (GNAT) domain BEN71_13520 PF02899 Phage integrase, N-terminal SAM-like domain BEN71_13520 PF00589 Phage integrase family BEN71_13530 PF04389 Peptidase family M28 BEN71_13535 PF02590 Predicted SPOUT methyltransferase BEN71_13540 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN71_13550 PF07859 alpha/beta hydrolase fold BEN71_13555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN71_13555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN71_13560 PF04060 Putative Fe-S cluster BEN71_13565 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN71_13565 PF10576 Iron-sulfur binding domain of endonuclease III BEN71_13565 PF00633 Helix-hairpin-helix motif BEN71_13580 PF05191 Adenylate kinase, active site lid BEN71_13595 PF03717 Penicillin-binding Protein dimerisation domain BEN71_13595 PF00905 Penicillin binding protein transpeptidase domain BEN71_13620 PF00549 CoA-ligase BEN71_13620 PF02629 CoA binding domain BEN71_13625 PF00549 CoA-ligase BEN71_13625 PF08442 ATP-grasp domain BEN71_13630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN71_13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_13635 PF02817 e3 binding domain BEN71_13635 PF00364 Biotin-requiring enzyme BEN71_13635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN71_13640 PF16870 2-oxoglutarate dehydrogenase C-terminal BEN71_13640 PF02779 Transketolase, pyrimidine binding domain BEN71_13640 PF16078 2-oxoglutarate dehydrogenase N-terminus BEN71_13640 PF00676 Dehydrogenase E1 component BEN71_13645 PF13085 2Fe-2S iron-sulfur cluster binding domain BEN71_13650 PF02910 Fumarate reductase flavoprotein C-term BEN71_13650 PF00890 FAD binding domain BEN71_13655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN71_13660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN71_13665 PF00285 Citrate synthase, C-terminal domain BEN71_13670 PF00854 POT family BEN71_13675 PF00557 Metallopeptidase family M24 BEN71_13675 PF01321 Creatinase/Prolidase N-terminal domain BEN71_13680 PF00743 Flavin-binding monooxygenase-like BEN71_13685 PF00106 short chain dehydrogenase BEN71_13710 PF00795 Carbon-nitrogen hydrolase BEN71_13710 PF02540 NAD synthase BEN71_13735 PF00092 von Willebrand factor type A domain BEN71_13735 PF12034 Domain of unknown function (DUF3520) BEN71_13735 PF12450 von Willebrand factor BEN71_13740 PF12450 von Willebrand factor BEN71_13740 PF00092 von Willebrand factor type A domain BEN71_13740 PF12034 Domain of unknown function (DUF3520) BEN71_13745 PF00809 Pterin binding enzyme BEN71_13750 PF06480 FtsH Extracellular BEN71_13750 PF01434 Peptidase family M41 BEN71_13750 PF17862 AAA+ lid domain BEN71_13750 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_13755 PF01728 FtsJ-like methyltransferase BEN71_13760 PF01985 CRS1 / YhbY (CRM) domain BEN71_13775 PF00117 Glutamine amidotransferase class-I BEN71_13775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEN71_13780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN71_13780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEN71_13780 PF02142 MGS-like domain BEN71_13785 PF03449 Transcription elongation factor, N-terminal BEN71_13785 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN71_13795 PF04072 Leucine carboxyl methyltransferase BEN71_13800 PF00132 Bacterial transferase hexapeptide (six repeats) BEN71_13815 PF00378 Enoyl-CoA hydratase/isomerase BEN71_13825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN71_13830 PF00561 alpha/beta hydrolase fold BEN71_13845 PF00999 Sodium/hydrogen exchanger family BEN71_13850 PF04228 Putative neutral zinc metallopeptidase BEN71_13855 PF05661 Protein of unknown function (DUF808) BEN71_13860 PF00579 tRNA synthetases class I (W and Y) BEN71_13865 PF01336 OB-fold nucleic acid binding domain BEN71_13865 PF00152 tRNA synthetases class II (D, K and N) BEN71_13880 PF00156 Phosphoribosyl transferase domain BEN71_13885 PF00301 Rubredoxin BEN71_13890 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_13890 PF18113 Rubredoxin binding C-terminal domain BEN71_13895 PF00561 alpha/beta hydrolase fold BEN71_13900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_13900 PF03466 LysR substrate binding domain BEN71_13905 PF02503 Polyphosphate kinase middle domain BEN71_13905 PF13090 Polyphosphate kinase C-terminal domain 2 BEN71_13905 PF17941 Polyphosphate kinase C-terminal domain 1 BEN71_13905 PF13089 Polyphosphate kinase N-terminal domain BEN71_13910 PF00912 Transglycosylase BEN71_13915 PF01694 Rhomboid family BEN71_13935 PF04546 Sigma-70, non-essential region BEN71_13935 PF04545 Sigma-70, region 4 BEN71_13935 PF03979 Sigma-70 factor, region 1.1 BEN71_13935 PF00140 Sigma-70 factor, region 1.2 BEN71_13935 PF04539 Sigma-70 region 3 BEN71_13935 PF04542 Sigma-70 region 2 BEN71_13945 PF03099 Biotin/lipoate A/B protein ligase family BEN71_13955 PF00465 Iron-containing alcohol dehydrogenase BEN71_13960 PF13520 Amino acid permease BEN71_13965 PF03358 NADPH-dependent FMN reductase BEN71_13990 PF00588 SpoU rRNA Methylase family BEN71_13995 PF10414 Sirohaem synthase dimerisation region BEN71_13995 PF14824 Sirohaem biosynthesis protein central BEN71_13995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEN71_14000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN71_14000 PF02403 Seryl-tRNA synthetase N-terminal domain BEN71_14025 PF03055 Retinal pigment epithelial membrane protein BEN71_14030 PF03548 Outer membrane lipoprotein carrier protein LolA BEN71_14035 PF01016 Ribosomal L27 protein BEN71_14040 PF00829 Ribosomal prokaryotic L21 protein BEN71_14045 PF00348 Polyprenyl synthetase BEN71_14055 PF01569 PAP2 superfamily BEN71_14060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN71_14060 PF00529 HlyD membrane-fusion protein of T1SS BEN71_14065 PF00873 AcrB/AcrD/AcrF family BEN71_14070 PF02321 Outer membrane efflux protein BEN71_14075 PF01906 Putative heavy-metal-binding BEN71_14080 PF01906 Putative heavy-metal-binding BEN71_14110 PF00133 tRNA synthetases class I (I, L, M and V) BEN71_14110 PF08264 Anticodon-binding domain of tRNA BEN71_14110 PF10458 Valyl tRNA synthetase tRNA binding arm BEN71_14115 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BEN71_14150 PF05649 Peptidase family M13 BEN71_14150 PF01431 Peptidase family M13 BEN71_14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_14155 PF03466 LysR substrate binding domain BEN71_14180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEN71_14180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEN71_14190 PF12161 HsdM N-terminal domain BEN71_14190 PF02384 N-6 DNA Methylase BEN71_14215 PF13356 Arm DNA-binding domain BEN71_14215 PF00589 Phage integrase family BEN71_14240 PF01327 Polypeptide deformylase BEN71_14250 PF08946 Osmosensory transporter coiled coil BEN71_14250 PF00083 Sugar (and other) transporter BEN71_14255 PF00990 Diguanylate cyclase, GGDEF domain BEN71_14255 PF00072 Response regulator receiver domain BEN71_14290 PF00378 Enoyl-CoA hydratase/isomerase BEN71_14300 PF00440 Bacterial regulatory proteins, tetR family BEN71_14330 PF00535 Glycosyl transferase family 2 BEN71_14335 PF14883 Hypothetical glycosyl hydrolase family 13 BEN71_14335 PF01522 Polysaccharide deacetylase BEN71_14340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN71_14345 PF07152 YaeQ protein BEN71_14350 PF07683 Cobalamin synthesis protein cobW C-terminal domain BEN71_14350 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEN71_14360 PF01494 FAD binding domain BEN71_14370 PF07702 UTRA domain BEN71_14370 PF00392 Bacterial regulatory proteins, gntR family BEN71_14385 PF03466 LysR substrate binding domain BEN71_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_14390 PF07690 Major Facilitator Superfamily BEN71_14395 PF00440 Bacterial regulatory proteins, tetR family BEN71_14405 PF03061 Thioesterase superfamily BEN71_14415 PF01734 Patatin-like phospholipase BEN71_14420 PF02417 Chromate transporter BEN71_14425 PF03616 Sodium/glutamate symporter BEN71_14435 PF00881 Nitroreductase family BEN71_14450 PF14572 Phosphoribosyl synthetase-associated domain BEN71_14450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BEN71_14455 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BEN71_14480 PF12320 Type 5 capsule protein repressor C-terminal domain BEN71_14480 PF00149 Calcineurin-like phosphoesterase BEN71_14510 PF01168 Alanine racemase, N-terminal domain BEN71_14515 PF00437 Type II/IV secretion system protein BEN71_14520 PF00437 Type II/IV secretion system protein BEN71_14525 PF01475 Ferric uptake regulator family BEN71_14530 PF04355 SmpA / OmlA family BEN71_14535 PF03658 RnfH family Ubiquitin BEN71_14545 PF01814 Hemerythrin HHE cation binding domain BEN71_14550 PF13230 Glutamine amidotransferases class-II BEN71_14560 PF00696 Amino acid kinase family BEN71_14565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN71_14565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN71_14565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN71_14565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN71_14570 PF00692 dUTPase BEN71_14575 PF13361 UvrD-like helicase C-terminal domain BEN71_14575 PF00580 UvrD/REP helicase N-terminal domain BEN71_14580 PF13488 Glycine zipper BEN71_14580 PF00691 OmpA family BEN71_14585 PF01553 Acyltransferase BEN71_14595 PF03775 Septum formation inhibitor MinC, C-terminal domain BEN71_14600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEN71_14605 PF03776 Septum formation topological specificity factor MinE BEN71_14615 PF00463 Isocitrate lyase family BEN71_14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN71_14620 PF03466 LysR substrate binding domain BEN71_14625 PF00571 CBS domain BEN71_14625 PF03471 Transporter associated domain BEN71_14625 PF01595 Cyclin M transmembrane N-terminal domain BEN71_14630 PF03600 Citrate transporter BEN71_14645 PF08240 Alcohol dehydrogenase GroES-like domain BEN71_14645 PF00107 Zinc-binding dehydrogenase BEN71_14650 PF00291 Pyridoxal-phosphate dependent enzyme BEN71_14655 PF08240 Alcohol dehydrogenase GroES-like domain BEN71_14655 PF00107 Zinc-binding dehydrogenase BEN71_14690 PF00009 Elongation factor Tu GTP binding domain BEN71_14695 PF01507 Phosphoadenosine phosphosulfate reductase family BEN71_14705 PF14052 Capsule assembly protein Wzi BEN71_14710 PF01384 Phosphate transporter family BEN71_14715 PF02310 B12 binding domain BEN71_14715 PF00809 Pterin binding enzyme BEN71_14715 PF02574 Homocysteine S-methyltransferase BEN71_14715 PF02965 Vitamin B12 dependent methionine synthase, activation domain BEN71_14715 PF02607 B12 binding domain BEN71_14730 PF00580 UvrD/REP helicase N-terminal domain BEN71_14730 PF13361 UvrD-like helicase C-terminal domain BEN71_14735 PF07690 Major Facilitator Superfamily BEN71_14740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN71_14740 PF00529 HlyD membrane-fusion protein of T1SS BEN71_14745 PF03061 Thioesterase superfamily BEN71_14750 PF00490 Delta-aminolevulinic acid dehydratase BEN71_14755 PF01266 FAD dependent oxidoreductase BEN71_14760 PF01370 NAD dependent epimerase/dehydratase family BEN71_14760 PF08338 Domain of unknown function (DUF1731) BEN71_14770 PF07690 Major Facilitator Superfamily BEN71_14775 PF12805 FUSC-like inner membrane protein yccS BEN71_14785 PF00667 FAD binding domain BEN71_14785 PF00258 Flavodoxin BEN71_14785 PF00175 Oxidoreductase NAD-binding domain BEN71_14840 PF04304 Protein of unknown function (DUF454) BEN71_14855 PF07687 Peptidase dimerisation domain BEN71_14855 PF01546 Peptidase family M20/M25/M40 BEN71_14865 PF00072 Response regulator receiver domain BEN71_14865 PF01584 CheW-like domain BEN71_14865 PF01627 Hpt domain BEN71_14865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_14870 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BEN71_14870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN71_14875 PF01584 CheW-like domain BEN71_14880 PF00072 Response regulator receiver domain BEN71_14885 PF00072 Response regulator receiver domain BEN71_14895 PF04073 Aminoacyl-tRNA editing domain BEN71_14895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN71_14895 PF03129 Anticodon binding domain BEN71_14950 PF00692 dUTPase BEN71_14970 PF10609 NUBPL iron-transfer P-loop NTPase BEN71_15025 PF01588 Putative tRNA binding domain BEN71_15025 PF09334 tRNA synthetases class I (M) BEN71_15030 PF02616 Segregation and condensation protein ScpA BEN71_15035 PF04079 Segregation and condensation complex subunit ScpB BEN71_15040 PF00849 RNA pseudouridylate synthase BEN71_15040 PF01479 S4 domain BEN71_15050 PF00005 ABC transporter BEN71_15050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEN71_15055 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_15060 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_15070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEN71_15075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEN71_15085 PF01618 MotA/TolQ/ExbB proton channel family BEN71_15090 PF02472 Biopolymer transport protein ExbD/TolR BEN71_15095 PF02472 Biopolymer transport protein ExbD/TolR BEN71_15110 PF03831 PhnA domain BEN71_15110 PF08274 PhnA Zinc-Ribbon BEN71_15140 PF00149 Calcineurin-like phosphoesterase BEN71_15145 PF13091 PLD-like domain BEN71_15155 PF13167 GTP-binding GTPase N-terminal BEN71_15155 PF16360 GTP-binding GTPase Middle Region BEN71_15155 PF01926 50S ribosome-binding GTPase BEN71_15165 PF04172 LrgB-like family BEN71_15190 PF00149 Calcineurin-like phosphoesterase BEN71_15195 PF00398 Ribosomal RNA adenine dimethylase BEN71_15205 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BEN71_15210 PF00572 Ribosomal protein L13 BEN71_15215 PF00380 Ribosomal protein S9/S16 BEN71_15230 PF00043 Glutathione S-transferase, C-terminal domain BEN71_15230 PF02798 Glutathione S-transferase, N-terminal domain BEN71_15235 PF04386 Stringent starvation protein B BEN71_15255 PF03707 Bacterial signalling protein N terminal repeat BEN71_15255 PF00990 Diguanylate cyclase, GGDEF domain BEN71_15255 PF00563 EAL domain BEN71_15305 PF00694 Aconitase C-terminal domain BEN71_15305 PF00330 Aconitase family (aconitate hydratase) BEN71_15335 PF04536 TPM domain BEN71_15345 PF00753 Metallo-beta-lactamase superfamily BEN71_15360 PF02875 Mur ligase family, glutamate ligase domain BEN71_15360 PF08245 Mur ligase middle domain BEN71_15365 PF01039 Carboxyl transferase domain BEN71_15370 PF00290 Tryptophan synthase alpha chain BEN71_15375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN71_15375 PF12833 Helix-turn-helix domain BEN71_15395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN71_15395 PF00378 Enoyl-CoA hydratase/isomerase BEN71_15395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN71_15400 PF02803 Thiolase, C-terminal domain BEN71_15400 PF00108 Thiolase, N-terminal domain BEN71_15405 PF00583 Acetyltransferase (GNAT) family BEN71_15410 PF02311 AraC-like ligand binding domain BEN71_15410 PF12833 Helix-turn-helix domain BEN71_15415 PF02515 CoA-transferase family III BEN71_15420 PF04966 Carbohydrate-selective porin, OprB family BEN71_15425 PF01011 PQQ enzyme repeat BEN71_15430 PF00293 NUDIX domain BEN71_15445 PF07411 Domain of unknown function (DUF1508) BEN71_15470 PF00155 Aminotransferase class I and II BEN71_15475 PF06968 Biotin and Thiamin Synthesis associated domain BEN71_15475 PF04055 Radical SAM superfamily BEN71_15475 PF00202 Aminotransferase class-III BEN71_15480 PF00561 alpha/beta hydrolase fold BEN71_15485 PF00578 AhpC/TSA family BEN71_15490 PF00210 Ferritin-like domain BEN71_15510 PF00593 TonB dependent receptor BEN71_15510 PF07715 TonB-dependent Receptor Plug Domain BEN71_15525 PF12826 Helix-hairpin-helix motif BEN71_15525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BEN71_15525 PF03120 NAD-dependent DNA ligase OB-fold domain BEN71_15525 PF01653 NAD-dependent DNA ligase adenylation domain BEN71_15525 PF00533 BRCA1 C Terminus (BRCT) domain BEN71_15535 PF06470 SMC proteins Flexible Hinge Domain BEN71_15535 PF02463 RecF/RecN/SMC N terminal domain BEN71_15565 PF01925 Sulfite exporter TauE/SafE BEN71_15575 PF03309 Type III pantothenate kinase BEN71_15585 PF06821 Serine hydrolase BEN71_15590 PF02978 Signal peptide binding domain BEN71_15590 PF02881 SRP54-type protein, helical bundle domain BEN71_15590 PF00448 SRP54-type protein, GTPase domain BEN71_15610 PF01207 Dihydrouridine synthase (Dus) BEN71_15630 PF05257 CHAP domain BEN71_15630 PF01476 LysM domain BEN71_15650 PF13673 Acetyltransferase (GNAT) domain BEN71_15660 PF03006 Haemolysin-III related BEN71_15665 PF07690 Major Facilitator Superfamily BEN71_15665 PF00083 Sugar (and other) transporter BEN71_15670 PF00849 RNA pseudouridylate synthase BEN71_15675 PF02785 Biotin carboxylase C-terminal domain BEN71_15675 PF00364 Biotin-requiring enzyme BEN71_15675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN71_15675 PF00289 Biotin carboxylase, N-terminal domain BEN71_15680 PF00378 Enoyl-CoA hydratase/isomerase BEN71_15685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_15685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_15685 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_15690 PF01039 Carboxyl transferase domain BEN71_15705 PF00440 Bacterial regulatory proteins, tetR family BEN71_15705 PF17932 Tetracyclin repressor-like, C-terminal domain BEN71_15710 PF13302 Acetyltransferase (GNAT) domain BEN71_15720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_15720 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_15720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_15725 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_15725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_15725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_15730 PF00176 SNF2 family N-terminal domain BEN71_15730 PF12419 SNF2 Helicase protein BEN71_15730 PF00271 Helicase conserved C-terminal domain BEN71_15790 PF00795 Carbon-nitrogen hydrolase BEN71_15800 PF02566 OsmC-like protein BEN71_15820 PF00437 Type II/IV secretion system protein BEN71_15845 PF00893 Small Multidrug Resistance protein BEN71_15850 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN71_15855 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain BEN71_15855 PF01113 Dihydrodipicolinate reductase, N-terminus BEN71_15865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN71_15865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN71_15875 PF00291 Pyridoxal-phosphate dependent enzyme BEN71_15880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEN71_15885 PF00593 TonB dependent receptor BEN71_15885 PF07715 TonB-dependent Receptor Plug Domain BEN71_15890 PF01923 Cobalamin adenosyltransferase BEN71_15910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BEN71_15930 PF04237 YjbR BEN71_15935 PF00486 Transcriptional regulatory protein, C terminal BEN71_15935 PF00072 Response regulator receiver domain BEN71_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_15940 PF00512 His Kinase A (phospho-acceptor) domain BEN71_15940 PF00672 HAMP domain BEN71_15950 PF04751 Protein of unknown function (DUF615) BEN71_15955 PF00381 PTS HPr component phosphorylation site BEN71_15960 PF03668 P-loop ATPase protein family BEN71_15965 PF02569 Pantoate-beta-alanine ligase BEN71_15970 PF02548 Ketopantoate hydroxymethyltransferase BEN71_15975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BEN71_15980 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN71_15980 PF12626 Polymerase A arginine-rich C-terminus BEN71_15980 PF01743 Poly A polymerase head domain BEN71_15985 PF10531 SLBB domain BEN71_15990 PF03819 MazG nucleotide pyrophosphohydrolase domain BEN71_16005 PF13291 ACT domain BEN71_16005 PF04607 Region found in RelA / SpoT proteins BEN71_16005 PF02824 TGS domain BEN71_16010 PF05958 tRNA (Uracil-5-)-methyltransferase BEN71_16020 PF00291 Pyridoxal-phosphate dependent enzyme BEN71_16025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEN71_16025 PF01627 Hpt domain BEN71_16025 PF00512 His Kinase A (phospho-acceptor) domain BEN71_16025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_16025 PF00672 HAMP domain BEN71_16025 PF00072 Response regulator receiver domain BEN71_16030 PF00378 Enoyl-CoA hydratase/isomerase BEN71_16035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN71_16035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN71_16040 PF01261 Xylose isomerase-like TIM barrel BEN71_16050 PF00909 Ammonium Transporter Family BEN71_16050 PF00672 HAMP domain BEN71_16055 PF01648 4'-phosphopantetheinyl transferase superfamily BEN71_16060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEN71_16060 PF01926 50S ribosome-binding GTPase BEN71_16065 PF13360 PQQ-like domain BEN71_16065 PF01011 PQQ enzyme repeat BEN71_16075 PF13393 Histidyl-tRNA synthetase BEN71_16075 PF03129 Anticodon binding domain BEN71_16080 PF04551 GcpE protein BEN71_16085 PF13464 Domain of unknown function (DUF4115) BEN71_16095 PF04055 Radical SAM superfamily BEN71_16100 PF00334 Nucleoside diphosphate kinase BEN71_16105 PF04384 Iron-sulphur cluster assembly BEN71_16110 PF01569 PAP2 superfamily BEN71_16115 PF13439 Glycosyltransferase Family 4 BEN71_16115 PF00534 Glycosyl transferases group 1 BEN71_16130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BEN71_16130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BEN71_16135 PF10369 Small subunit of acetolactate synthase BEN71_16140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN71_16140 PF00205 Thiamine pyrophosphate enzyme, central domain BEN71_16140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN71_16150 PF08264 Anticodon-binding domain of tRNA BEN71_16150 PF09334 tRNA synthetases class I (M) BEN71_16150 PF13603 Leucyl-tRNA synthetase, Domain 2 BEN71_16150 PF00133 tRNA synthetases class I (I, L, M and V) BEN71_16165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN71_16170 PF12704 MacB-like periplasmic core domain BEN71_16170 PF00005 ABC transporter BEN71_16170 PF02687 FtsX-like permease family BEN71_16175 PF02321 Outer membrane efflux protein BEN71_16210 PF04717 Type VI secretion system, phage-baseplate injector BEN71_16225 PF00929 Exonuclease BEN71_16230 PF03193 RsgA GTPase BEN71_16240 PF00462 Glutaredoxin BEN71_16245 PF02556 Preprotein translocase subunit SecB BEN71_16255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEN71_16255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN71_16265 PF02441 Flavoprotein BEN71_16265 PF04127 DNA / pantothenate metabolism flavoprotein BEN71_16270 PF04002 RadC-like JAB domain BEN71_16275 PF01062 Bestrophin, RFP-TM, chloride channel BEN71_16320 PF03358 NADPH-dependent FMN reductase BEN71_16325 PF03631 Virulence factor BrkB BEN71_16355 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEN71_16380 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEN71_16385 PF00005 ABC transporter BEN71_16390 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_16395 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_16430 PF08206 Ribonuclease B OB domain BEN71_16430 PF08461 Ribonuclease R winged-helix domain BEN71_16430 PF17876 Cold shock domain BEN71_16430 PF00575 S1 RNA binding domain BEN71_16430 PF00773 RNB domain BEN71_16445 PF01432 Peptidase family M3 BEN71_16450 PF09526 Probable metal-binding protein (DUF2387) BEN71_16460 PF00892 EamA-like transporter family BEN71_16485 PF03937 Flavinator of succinate dehydrogenase BEN71_16490 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_16490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_16490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_16510 PF00743 Flavin-binding monooxygenase-like BEN71_16515 PF01196 Ribosomal protein L17 BEN71_16520 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BEN71_16520 PF01000 RNA polymerase Rpb3/RpoA insert domain BEN71_16520 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BEN71_16525 PF01479 S4 domain BEN71_16525 PF00163 Ribosomal protein S4/S9 N-terminal domain BEN71_16530 PF00411 Ribosomal protein S11 BEN71_16535 PF00416 Ribosomal protein S13/S18 BEN71_16540 PF00444 Ribosomal protein L36 BEN71_16545 PF00344 SecY translocase BEN71_16550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BEN71_16555 PF00327 Ribosomal protein L30p/L7e BEN71_16560 PF03719 Ribosomal protein S5, C-terminal domain BEN71_16560 PF00333 Ribosomal protein S5, N-terminal domain BEN71_16565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BEN71_16570 PF00347 Ribosomal protein L6 BEN71_16575 PF00410 Ribosomal protein S8 BEN71_16580 PF00253 Ribosomal protein S14p/S29e BEN71_16585 PF00281 Ribosomal protein L5 BEN71_16585 PF00673 ribosomal L5P family C-terminus BEN71_16590 PF00467 KOW motif BEN71_16590 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BEN71_16595 PF00238 Ribosomal protein L14p/L23e BEN71_16600 PF00366 Ribosomal protein S17 BEN71_16605 PF00831 Ribosomal L29 protein BEN71_16610 PF00252 Ribosomal protein L16p/L10e BEN71_16615 PF07650 KH domain BEN71_16615 PF00189 Ribosomal protein S3, C-terminal domain BEN71_16620 PF00237 Ribosomal protein L22p/L17e BEN71_16625 PF00203 Ribosomal protein S19 BEN71_16630 PF03947 Ribosomal Proteins L2, C-terminal domain BEN71_16630 PF00181 Ribosomal Proteins L2, RNA binding domain BEN71_16635 PF00276 Ribosomal protein L23 BEN71_16640 PF00573 Ribosomal protein L4/L1 family BEN71_16645 PF00297 Ribosomal protein L3 BEN71_16650 PF00338 Ribosomal protein S10p/S20e BEN71_16655 PF00117 Glutamine amidotransferase class-I BEN71_16660 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN71_16665 PF05872 Bacterial protein of unknown function (DUF853) BEN71_16670 PF00970 Oxidoreductase FAD-binding domain BEN71_16670 PF00042 Globin BEN71_16670 PF00175 Oxidoreductase NAD-binding domain BEN71_16675 PF02082 Transcriptional regulator BEN71_16680 PF01926 50S ribosome-binding GTPase BEN71_16695 PF00375 Sodium:dicarboxylate symporter family BEN71_16705 PF01553 Acyltransferase BEN71_16735 PF00271 Helicase conserved C-terminal domain BEN71_16735 PF00270 DEAD/DEAH box helicase BEN71_16735 PF17191 RecG wedge domain BEN71_16740 PF00156 Phosphoribosyl transferase domain BEN71_16745 PF00293 NUDIX domain BEN71_16750 PF03641 Possible lysine decarboxylase BEN71_16755 PF01544 CorA-like Mg2+ transporter protein BEN71_16765 PF05494 MlaC protein BEN71_16770 PF02470 MlaD protein BEN71_16775 PF02405 Permease MlaE BEN71_16780 PF00005 ABC transporter BEN71_16785 PF00271 Helicase conserved C-terminal domain BEN71_16785 PF00270 DEAD/DEAH box helicase BEN71_16790 PF00459 Inositol monophosphatase family BEN71_16795 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BEN71_16795 PF02780 Transketolase, C-terminal domain BEN71_16795 PF02779 Transketolase, pyrimidine binding domain BEN71_16800 PF00925 GTP cyclohydrolase II BEN71_16805 PF06969 HemN C-terminal domain BEN71_16805 PF04055 Radical SAM superfamily BEN71_16810 PF01218 Coproporphyrinogen III oxidase BEN71_16820 PF08501 Shikimate dehydrogenase substrate binding domain BEN71_16820 PF01488 Shikimate / quinate 5-dehydrogenase BEN71_16820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BEN71_16830 PF00665 Integrase core domain BEN71_16830 PF13936 Helix-turn-helix domain BEN71_16835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_16835 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN71_16835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN71_16835 PF02770 Acyl-CoA dehydrogenase, middle domain BEN71_16845 PF07690 Major Facilitator Superfamily BEN71_16850 PF01638 HxlR-like helix-turn-helix BEN71_16855 PF06969 HemN C-terminal domain BEN71_16855 PF04055 Radical SAM superfamily BEN71_16865 PF01554 MatE BEN71_16875 PF03109 ABC1 family BEN71_16880 PF01197 Ribosomal protein L31 BEN71_16885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BEN71_16900 PF01613 Flavin reductase like domain BEN71_16910 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_16910 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEN71_16920 PF03884 DNA gyrase inhibitor YacG BEN71_16940 PF00753 Metallo-beta-lactamase superfamily BEN71_16945 PF00762 Ferrochelatase BEN71_16955 PF01177 Asp/Glu/Hydantoin racemase BEN71_16985 PF04717 Type VI secretion system, phage-baseplate injector BEN71_16990 PF01206 Sulfurtransferase TusA BEN71_16995 PF00571 CBS domain BEN71_16995 PF03471 Transporter associated domain BEN71_17000 PF00795 Carbon-nitrogen hydrolase BEN71_17015 PF08334 Type II secretion system (T2SS), protein G BEN71_17015 PF07963 Prokaryotic N-terminal methylation motif BEN71_17020 PF00482 Type II secretion system (T2SS), protein F BEN71_17025 PF00271 Helicase conserved C-terminal domain BEN71_17025 PF17764 3′ DNA-binding domain (3′BD) BEN71_17025 PF18074 Primosomal protein N C-terminal domain BEN71_17025 PF00270 DEAD/DEAH box helicase BEN71_17025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BEN71_17050 PF01594 AI-2E family transporter BEN71_17055 PF00080 Copper/zinc superoxide dismutase (SODC) BEN71_17070 PF12805 FUSC-like inner membrane protein yccS BEN71_17075 PF12823 Domain of unknown function (DUF3817) BEN71_17080 PF07690 Major Facilitator Superfamily BEN71_17090 PF02678 Pirin BEN71_17090 PF05726 Pirin C-terminal cupin domain BEN71_17110 PF01565 FAD binding domain BEN71_17110 PF02913 FAD linked oxidases, C-terminal domain BEN71_17115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN71_17115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN71_17120 PF00892 EamA-like transporter family BEN71_17125 PF00149 Calcineurin-like phosphoesterase BEN71_17135 PF00892 EamA-like transporter family BEN71_17145 PF01502 Phosphoribosyl-AMP cyclohydrolase BEN71_17165 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN71_17165 PF12833 Helix-turn-helix domain BEN71_17175 PF13244 Domain of unknown function (DUF4040) BEN71_17175 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BEN71_17175 PF00361 Proton-conducting membrane transporter BEN71_17175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN71_17180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN71_17185 PF00361 Proton-conducting membrane transporter BEN71_17195 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BEN71_17205 PF00677 Lumazine binding domain BEN71_17215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEN71_17215 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN71_17220 PF00310 Glutamine amidotransferases class-II BEN71_17220 PF04898 Glutamate synthase central domain BEN71_17220 PF01645 Conserved region in glutamate synthase BEN71_17220 PF01493 GXGXG motif BEN71_17230 PF01761 3-dehydroquinate synthase BEN71_17235 PF01202 Shikimate kinase BEN71_17240 PF00263 Bacterial type II and III secretion system protein BEN71_17240 PF07660 Secretin and TonB N terminus short domain BEN71_17240 PF11741 AMIN domain BEN71_17240 PF03958 Bacterial type II/III secretion system short domain BEN71_17265 PF00905 Penicillin binding protein transpeptidase domain BEN71_17265 PF00912 Transglycosylase BEN71_17265 PF17092 Penicillin-binding protein OB-like domain BEN71_17270 PF13847 Methyltransferase domain BEN71_17275 PF00953 Glycosyl transferase family 4 BEN71_17280 PF01225 Mur ligase family, catalytic domain BEN71_17280 PF08245 Mur ligase middle domain BEN71_17280 PF02875 Mur ligase family, glutamate ligase domain BEN71_17285 PF08245 Mur ligase middle domain BEN71_17285 PF01225 Mur ligase family, catalytic domain BEN71_17285 PF02875 Mur ligase family, glutamate ligase domain BEN71_17290 PF00905 Penicillin binding protein transpeptidase domain BEN71_17290 PF03717 Penicillin-binding Protein dimerisation domain BEN71_17300 PF01795 MraW methylase family BEN71_17325 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN71_17345 PF01545 Cation efflux family BEN71_17355 PF00873 AcrB/AcrD/AcrF family BEN71_17365 PF02321 Outer membrane efflux protein BEN71_17380 PF00106 short chain dehydrogenase BEN71_17385 PF09371 Tex-like protein N-terminal domain BEN71_17385 PF00575 S1 RNA binding domain BEN71_17385 PF17674 HHH domain BEN71_17385 PF16921 Tex protein YqgF-like domain BEN71_17390 PF00072 Response regulator receiver domain BEN71_17390 PF00486 Transcriptional regulatory protein, C terminal BEN71_17395 PF00672 HAMP domain BEN71_17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_17395 PF00512 His Kinase A (phospho-acceptor) domain BEN71_17400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEN71_17400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEN71_17405 PF05199 GMC oxidoreductase BEN71_17405 PF00732 GMC oxidoreductase BEN71_17410 PF00583 Acetyltransferase (GNAT) family BEN71_17440 PF00475 Imidazoleglycerol-phosphate dehydratase BEN71_17445 PF00117 Glutamine amidotransferase class-I BEN71_17475 PF00977 Histidine biosynthesis protein BEN71_17485 PF00892 EamA-like transporter family BEN71_17490 PF03992 Antibiotic biosynthesis monooxygenase BEN71_17505 PF01636 Phosphotransferase enzyme family BEN71_17510 PF00977 Histidine biosynthesis protein BEN71_17520 PF12848 ABC transporter BEN71_17520 PF00005 ABC transporter BEN71_17525 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN71_17535 PF01895 PhoU domain BEN71_17550 PF13667 ThiC-associated domain BEN71_17550 PF01964 Radical SAM ThiC family BEN71_17555 PF00293 NUDIX domain BEN71_17560 PF00149 Calcineurin-like phosphoesterase BEN71_17565 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEN71_17570 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN71_17575 PF01098 Cell cycle protein BEN71_17580 PF08245 Mur ligase middle domain BEN71_17580 PF02875 Mur ligase family, glutamate ligase domain BEN71_17585 PF09335 SNARE associated Golgi protein BEN71_17590 PF00677 Lumazine binding domain BEN71_17595 PF02086 D12 class N6 adenine-specific DNA methyltransferase BEN71_17600 PF01872 RibD C-terminal domain BEN71_17600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEN71_17605 PF03477 ATP cone domain BEN71_17610 PF00909 Ammonium Transporter Family BEN71_17615 PF00543 Nitrogen regulatory protein P-II BEN71_17625 PF01078 Magnesium chelatase, subunit ChlI BEN71_17625 PF13335 Magnesium chelatase, subunit ChlI C-terminal BEN71_17630 PF00583 Acetyltransferase (GNAT) family BEN71_17650 PF03573 outer membrane porin, OprD family BEN71_17655 PF00719 Inorganic pyrophosphatase BEN71_17670 PF13193 AMP-binding enzyme C-terminal domain BEN71_17670 PF00501 AMP-binding enzyme BEN71_17675 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN71_17675 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN71_17695 PF07690 Major Facilitator Superfamily BEN71_17700 PF03458 UPF0126 domain BEN71_17705 PF02810 SEC-C motif BEN71_17720 PF03471 Transporter associated domain BEN71_17720 PF03741 Integral membrane protein TerC family BEN71_17725 PF03641 Possible lysine decarboxylase BEN71_17735 PF06942 GlpM protein BEN71_17750 PF17760 UvrA interaction domain BEN71_17750 PF17755 UvrA DNA-binding domain BEN71_17765 PF00990 Diguanylate cyclase, GGDEF domain BEN71_17770 PF00905 Penicillin binding protein transpeptidase domain BEN71_17780 PF02028 BCCT, betaine/carnitine/choline family transporter BEN71_17790 PF00474 Sodium:solute symporter family BEN71_17795 PF04341 Protein of unknown function, DUF485 BEN71_17800 PF00512 His Kinase A (phospho-acceptor) domain BEN71_17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_17800 PF00072 Response regulator receiver domain BEN71_17800 PF09456 RcsC Alpha-Beta-Loop (ABL) BEN71_17825 PF03358 NADPH-dependent FMN reductase BEN71_17865 PF00440 Bacterial regulatory proteins, tetR family BEN71_17890 PF01327 Polypeptide deformylase BEN71_17895 PF01476 LysM domain BEN71_17900 PF02481 DNA recombination-mediator protein A BEN71_17900 PF17782 DprA winged helix domain BEN71_17905 PF01300 Telomere recombination BEN71_17910 PF00892 EamA-like transporter family BEN71_17915 PF00440 Bacterial regulatory proteins, tetR family BEN71_17920 PF07690 Major Facilitator Superfamily BEN71_17935 PF00255 Glutathione peroxidase BEN71_17960 PF00145 C-5 cytosine-specific DNA methylase BEN71_17970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BEN71_17975 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN71_17975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN71_17980 PF00231 ATP synthase BEN71_17985 PF00306 ATP synthase alpha/beta chain, C terminal domain BEN71_17985 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN71_17985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN71_17990 PF00213 ATP synthase delta (OSCP) subunit BEN71_17995 PF00430 ATP synthase B/B' CF(0) BEN71_18000 PF00137 ATP synthase subunit C BEN71_18005 PF00119 ATP synthase A chain BEN71_18015 PF01297 Zinc-uptake complex component A periplasmic BEN71_18025 PF00005 ABC transporter BEN71_18030 PF00950 ABC 3 transport family BEN71_18035 PF01810 LysE type translocator BEN71_18040 PF01810 LysE type translocator BEN71_18045 PF04261 Dyp-type peroxidase family BEN71_18065 PF04717 Type VI secretion system, phage-baseplate injector BEN71_18065 PF16671 Actin cross-linking domain BEN71_18070 PF00390 Malic enzyme, N-terminal domain BEN71_18070 PF03949 Malic enzyme, NAD binding domain BEN71_18085 PF05746 DALR anticodon binding domain BEN71_18085 PF03485 Arginyl tRNA synthetase N terminal domain BEN71_18085 PF00750 tRNA synthetases class I (R) BEN71_18095 PF00486 Transcriptional regulatory protein, C terminal BEN71_18095 PF00072 Response regulator receiver domain BEN71_18100 PF00512 His Kinase A (phospho-acceptor) domain BEN71_18100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN71_18100 PF00672 HAMP domain BEN71_18105 PF06123 Inner membrane protein CreD BEN71_18125 PF11842 Domain of unknown function (DUF3362) BEN71_18125 PF04055 Radical SAM superfamily BEN71_18125 PF08497 Radical SAM N-terminal BEN71_18135 PF07690 Major Facilitator Superfamily BEN71_18140 PF00196 Bacterial regulatory proteins, luxR family BEN71_18140 PF00072 Response regulator receiver domain BEN71_18145 PF03358 NADPH-dependent FMN reductase BEN71_18150 PF00296 Luciferase-like monooxygenase BEN71_18155 PF00144 Beta-lactamase BEN71_18160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN71_18160 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN71_18165 PF16177 Acetyl-coenzyme A synthetase N-terminus BEN71_18165 PF13193 AMP-binding enzyme C-terminal domain BEN71_18165 PF00501 AMP-binding enzyme BEN71_18175 PF00924 Mechanosensitive ion channel BEN71_18180 PF04452 RNA methyltransferase BEN71_18185 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BEN71_18190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN71_18220 PF00958 GMP synthase C terminal domain BEN71_18220 PF02540 NAD synthase BEN71_18220 PF00117 Glutamine amidotransferase class-I BEN71_18230 PF07681 DoxX BEN71_18235 PF09335 SNARE associated Golgi protein BEN71_18245 PF13614 AAA domain BEN71_18255 PF01722 BolA-like protein BEN71_18275 PF00392 Bacterial regulatory proteins, gntR family BEN71_18275 PF07729 FCD domain BEN71_18290 PF16957 Malonate decarboxylase, alpha subunit, transporter BEN71_18295 PF06857 Malonate decarboxylase delta subunit (MdcD) BEN71_18300 PF01039 Carboxyl transferase domain BEN71_18315 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BEN71_18325 PF06965 Na+/H+ antiporter 1 BEN71_18335 PF07690 Major Facilitator Superfamily BEN71_18340 PF00857 Isochorismatase family BEN71_18345 PF17645 Arylmalonate decarboxylase BEN71_18350 PF00561 alpha/beta hydrolase fold BEN71_18355 PF01494 FAD binding domain BEN71_18365 PF12802 MarR family BEN71_18375 PF00005 ABC transporter BEN71_18375 PF00664 ABC transporter transmembrane region BEN71_18390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN71_18390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN71_18390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN71_18390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN71_18395 PF16363 GDP-mannose 4,6 dehydratase BEN71_18400 PF00342 Phosphoglucose isomerase BEN71_18405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN71_18405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN71_18405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN71_18410 PF00483 Nucleotidyl transferase BEN71_18415 PF02397 Bacterial sugar transferase BEN71_18425 PF01370 NAD dependent epimerase/dehydratase family BEN71_18430 PF00535 Glycosyl transferase family 2 BEN71_18440 PF00535 Glycosyl transferase family 2 BEN71_18450 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BEN71_18455 PF00483 Nucleotidyl transferase BEN71_18460 PF04321 RmlD substrate binding domain BEN71_18465 PF16363 GDP-mannose 4,6 dehydratase BEN71_18470 PF10531 SLBB domain BEN71_18470 PF02563 Polysaccharide biosynthesis/export protein BEN71_18470 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BEN71_18475 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN71_18480 PF13807 G-rich domain on putative tyrosine kinase BEN71_18480 PF02706 Chain length determinant protein BEN71_18480 PF13614 AAA domain BEN71_18485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN71_18485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN71_18490 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN71_18490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN71_18505 PF01757 Acyltransferase family BEN71_18510 PF03023 Lipid II flippase MurJ BEN71_18515 PF01510 N-acetylmuramoyl-L-alanine amidase BEN71_18520 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BEN71_18520 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BEN71_18540 PF05506 Domain of unknown function (DUF756) BEN71_18540 PF04185 Phosphoesterase family BEN71_18545 PF01138 3' exoribonuclease family, domain 1 BEN71_18545 PF03725 3' exoribonuclease family, domain 2 BEN71_18555 PF04463 Protein of unknown function (DUF523) BEN71_18560 PF01758 Sodium Bile acid symporter family BEN71_18565 PF00857 Isochorismatase family BEN71_18570 PF07690 Major Facilitator Superfamily BEN71_18575 PF00701 Dihydrodipicolinate synthetase family BEN71_18585 PF01259 SAICAR synthetase BEN71_18595 PF00487 Fatty acid desaturase BEN71_18600 PF00175 Oxidoreductase NAD-binding domain BEN71_18600 PF00970 Oxidoreductase FAD-binding domain BEN71_18600 PF00042 Globin BEN71_18605 PF00440 Bacterial regulatory proteins, tetR family BEN71_18610 PF00440 Bacterial regulatory proteins, tetR family BEN71_18615 PF07690 Major Facilitator Superfamily BEN71_18620 PF01323 DSBA-like thioredoxin domain BEN71_18630 PF13419 Haloacid dehalogenase-like hydrolase BEN71_18635 PF00106 short chain dehydrogenase BEN71_18655 PF00583 Acetyltransferase (GNAT) family BEN71_18655 PF00696 Amino acid kinase family BEN71_18665 PF09084 NMT1/THI5 like BEN71_18670 PF09084 NMT1/THI5 like BEN71_18675 PF00296 Luciferase-like monooxygenase BEN71_18680 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_18685 PF00005 ABC transporter BEN71_18690 PF00440 Bacterial regulatory proteins, tetR family BEN71_18690 PF17938 Tetracyclin repressor-like, C-terminal domain BEN71_18720 PF00691 OmpA family BEN71_18720 PF05736 OprF membrane domain BEN71_18775 PF10431 C-terminal, D2-small domain, of ClpB protein BEN71_18775 PF17871 AAA lid domain BEN71_18775 PF07724 AAA domain (Cdc48 subfamily) BEN71_18775 PF00004 ATPase family associated with various cellular activities (AAA) BEN71_18835 PF00149 Calcineurin-like phosphoesterase BEN71_18835 PF02872 5'-nucleotidase, C-terminal domain BEN71_18845 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BEN71_18850 PF00528 Binding-protein-dependent transport system inner membrane component BEN71_18855 PF00005 ABC transporter BEN71_18860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BEN71_18875 PF01025 GrpE BEN71_18880 PF00012 Hsp70 protein BEN71_18885 PF13411 MerR HTH family regulatory protein BEN71_18920 PF13406 Transglycosylase SLT domain BEN71_18930 PF02222 ATP-grasp domain BEN71_18930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BEN71_18935 PF00731 AIR carboxylase BEN71_18955 PF01225 Mur ligase family, catalytic domain BEN71_18955 PF02875 Mur ligase family, glutamate ligase domain BEN71_18955 PF08245 Mur ligase middle domain BEN71_18980 PF14542 GCN5-related N-acetyl-transferase BEN71_18985 PF14542 GCN5-related N-acetyl-transferase BEN71_18990 PF07690 Major Facilitator Superfamily BEN71_18995 PF03741 Integral membrane protein TerC family BEN71_19015 PF03738 Glutathionylspermidine synthase preATP-grasp BEN71_19020 PF09562 LlaMI restriction endonuclease BEN71_19030 PF01979 Amidohydrolase family BEN71_19035 PF00156 Phosphoribosyl transferase domain BEN71_19045 PF13098 Thioredoxin-like domain BEN71_19045 PF10411 Disulfide bond isomerase protein N-terminus BEN71_19055 PF02583 Metal-sensitive transcriptional repressor BEN71_19075 PF12631 MnmE helical domain BEN71_19075 PF10396 GTP-binding protein TrmE N-terminus BEN71_19075 PF01926 50S ribosome-binding GTPase BEN71_19080 PF14849 YidC periplasmic domain BEN71_19080 PF02096 60Kd inner membrane protein BEN71_19085 PF01809 Putative membrane protein insertion efficiency factor BEN71_19090 PF00825 Ribonuclease P BEN71_19095 PF00468 Ribosomal protein L34