locus-tag class description NYE86_00005 PF00308 Bacterial dnaA protein NYE86_00005 PF08299 Bacterial dnaA protein helix-turn-helix NYE86_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NYE86_00010 PF02767 DNA polymerase III beta subunit, central domain NYE86_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NYE86_00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NYE86_00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYE86_00020 PF02463 RecF/RecN/SMC N terminal domain NYE86_00025 PF05258 Dna[CI] antecedent, DciA NYE86_00030 PF00204 DNA gyrase B NYE86_00030 PF00986 DNA gyrase B subunit, carboxyl terminus NYE86_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_00030 PF01751 Toprim domain NYE86_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A NYE86_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller NYE86_00040 PF12089 Transmembrane domain of unknown function (DUF3566) NYE86_00065 PF00069 Protein kinase domain NYE86_00085 PF00248 Aldo/keto reductase family NYE86_00095 PF13302 Acetyltransferase (GNAT) domain NYE86_00105 PF01061 ABC-2 type transporter NYE86_00110 PF13732 Domain of unknown function (DUF4162) NYE86_00110 PF00005 ABC transporter NYE86_00120 PF01022 Bacterial regulatory protein, arsR family NYE86_00130 PF02525 Flavodoxin-like fold NYE86_00140 PF00196 Bacterial regulatory proteins, luxR family NYE86_00145 PF07690 Major Facilitator Superfamily NYE86_00150 PF17258 Family of unknown function (DUF5324) NYE86_00155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NYE86_00160 PF01694 Rhomboid family NYE86_00165 PF06781 Cell division protein CrgA NYE86_00180 PF00117 Glutamine amidotransferase class-I NYE86_00190 PF04203 Sortase domain NYE86_00195 PF00069 Protein kinase domain NYE86_00195 PF03793 PASTA domain NYE86_00200 PF00905 Penicillin binding protein transpeptidase domain NYE86_00205 PF01098 Cell cycle protein NYE86_00220 PF16697 Inner membrane component of T3SS, cytoplasmic domain NYE86_00225 PF00498 FHA domain NYE86_00225 PF12401 Protein of unknown function (DUF2662) NYE86_00235 PF00202 Aminotransferase class-III NYE86_00250 PF00550 Phosphopantetheine attachment site NYE86_00250 PF00501 AMP-binding enzyme NYE86_00250 PF07993 Male sterility protein NYE86_00250 PF00668 Condensation domain NYE86_00250 PF13193 AMP-binding enzyme C-terminal domain NYE86_00255 PF02342 TerD domain NYE86_00260 PF01047 MarR family NYE86_00265 PF13581 Histidine kinase-like ATPase domain NYE86_00265 PF08448 PAS fold NYE86_00265 PF13466 STAS domain NYE86_00265 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_00285 PF00581 Rhodanese-like domain NYE86_00310 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NYE86_00310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYE86_00310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYE86_00315 PF18665 Tetracyclin repressor-like, C-terminal domain NYE86_00315 PF00440 Bacterial regulatory proteins, tetR family NYE86_00325 PF01037 Lrp/AsnC ligand binding domain NYE86_00325 PF13404 AsnC-type helix-turn-helix domain NYE86_00335 PF00676 Dehydrogenase E1 component NYE86_00340 PF02780 Transketolase, C-terminal domain NYE86_00340 PF02779 Transketolase, pyrimidine binding domain NYE86_00360 PF00994 Probable molybdopterin binding domain NYE86_00360 PF03454 MoeA C-terminal region (domain IV) NYE86_00360 PF03453 MoeA N-terminal region (domain I and II) NYE86_00365 PF02254 TrkA-N domain NYE86_00365 PF07885 Ion channel NYE86_00390 PF00067 Cytochrome P450 NYE86_00400 PF01212 Beta-eliminating lyase NYE86_00405 PF08659 KR domain NYE86_00405 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_00405 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_00405 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_00405 PF00698 Acyl transferase domain NYE86_00405 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_00405 PF00550 Phosphopantetheine attachment site NYE86_00405 PF14765 Polyketide synthase dehydratase NYE86_00415 PF00005 ABC transporter NYE86_00415 PF02687 FtsX-like permease family NYE86_00415 PF12704 MacB-like periplasmic core domain NYE86_00425 PF10759 Protein of unknown function (DUF2587) NYE86_00430 PF00069 Protein kinase domain NYE86_00430 PF03793 PASTA domain NYE86_00435 PF00069 Protein kinase domain NYE86_00435 PF03793 PASTA domain NYE86_00445 PF00072 Response regulator receiver domain NYE86_00445 PF00196 Bacterial regulatory proteins, luxR family NYE86_00450 PF00676 Dehydrogenase E1 component NYE86_00455 PF02780 Transketolase, C-terminal domain NYE86_00455 PF02779 Transketolase, pyrimidine binding domain NYE86_00475 PF07729 FCD domain NYE86_00475 PF00392 Bacterial regulatory proteins, gntR family NYE86_00480 PF07690 Major Facilitator Superfamily NYE86_00490 PF00795 Carbon-nitrogen hydrolase NYE86_00515 PF02127 Aminopeptidase I zinc metalloprotease (M18) NYE86_00520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_00520 PF12806 Acetyl-CoA dehydrogenase C-terminal like NYE86_00520 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_00520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_00530 PF02678 Pirin NYE86_00530 PF05726 Pirin C-terminal cupin domain NYE86_00605 PF01336 OB-fold nucleic acid binding domain NYE86_00605 PF02938 GAD domain NYE86_00605 PF00152 tRNA synthetases class II (D, K and N) NYE86_00610 PF08281 Sigma-70, region 4 NYE86_00610 PF04542 Sigma-70 region 2 NYE86_00620 PF09334 tRNA synthetases class I (M) NYE86_00660 PF02687 FtsX-like permease family NYE86_00660 PF00005 ABC transporter NYE86_00660 PF12704 MacB-like periplasmic core domain NYE86_00665 PF12704 MacB-like periplasmic core domain NYE86_00665 PF00005 ABC transporter NYE86_00665 PF02687 FtsX-like permease family NYE86_00675 PF00486 Transcriptional regulatory protein, C terminal NYE86_00675 PF00072 Response regulator receiver domain NYE86_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_00680 PF00672 HAMP domain NYE86_00680 PF00512 His Kinase A (phospho-acceptor) domain NYE86_00695 PF02342 TerD domain NYE86_00700 PF00248 Aldo/keto reductase family NYE86_00705 PF01810 LysE type translocator NYE86_00755 PF00248 Aldo/keto reductase family NYE86_00760 PF02669 K+-transporting ATPase, c chain NYE86_00770 PF03814 Potassium-transporting ATPase A subunit NYE86_00785 PF00248 Aldo/keto reductase family NYE86_00790 PF13466 STAS domain NYE86_00790 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_00790 PF08448 PAS fold NYE86_00790 PF13581 Histidine kinase-like ATPase domain NYE86_00795 PF00196 Bacterial regulatory proteins, luxR family NYE86_00795 PF00072 Response regulator receiver domain NYE86_00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_00800 PF05384 Sensor protein DegS NYE86_00800 PF07730 Histidine kinase NYE86_00805 PF00005 ABC transporter NYE86_00805 PF02687 FtsX-like permease family NYE86_00805 PF12704 MacB-like periplasmic core domain NYE86_00830 PF00248 Aldo/keto reductase family NYE86_00835 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NYE86_00835 PF01522 Polysaccharide deacetylase NYE86_00845 PF01494 FAD binding domain NYE86_00855 PF00672 HAMP domain NYE86_00855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_00855 PF00512 His Kinase A (phospho-acceptor) domain NYE86_00860 PF00072 Response regulator receiver domain NYE86_00860 PF00486 Transcriptional regulatory protein, C terminal NYE86_00870 PF00912 Transglycosylase NYE86_00870 PF00905 Penicillin binding protein transpeptidase domain NYE86_00885 PF01522 Polysaccharide deacetylase NYE86_00890 PF10503 Esterase PHB depolymerase NYE86_00895 PF00553 Cellulose binding domain NYE86_00895 PF00331 Glycosyl hydrolase family 10 NYE86_00900 PF00356 Bacterial regulatory proteins, lacI family NYE86_00915 PF13744 Helix-turn-helix domain NYE86_00920 PF05973 Phage derived protein Gp49-like (DUF891) NYE86_00940 PF14765 Polyketide synthase dehydratase NYE86_00940 PF00550 Phosphopantetheine attachment site NYE86_00940 PF08659 KR domain NYE86_00940 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_00940 PF00698 Acyl transferase domain NYE86_00940 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_00940 PF00107 Zinc-binding dehydrogenase NYE86_00940 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_00940 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_00965 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_00965 PF14759 Reductase C-terminal NYE86_00975 PF09992 Phosphodiester glycosidase NYE86_00975 PF12708 Pectate lyase superfamily protein NYE86_01005 PF13426 PAS domain NYE86_01005 PF00196 Bacterial regulatory proteins, luxR family NYE86_01010 PF12704 MacB-like periplasmic core domain NYE86_01010 PF00005 ABC transporter NYE86_01010 PF02687 FtsX-like permease family NYE86_01040 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_01040 PF14759 Reductase C-terminal NYE86_01050 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_01050 PF14759 Reductase C-terminal NYE86_01055 PF01447 Thermolysin metallopeptidase, catalytic domain NYE86_01055 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYE86_01055 PF16485 Protealysin propeptide NYE86_01060 PF04261 Dyp-type peroxidase family NYE86_01060 PF10518 TAT (twin-arginine translocation) pathway signal sequence NYE86_01075 PF02342 TerD domain NYE86_01085 PF17754 MftR C-terminal domain NYE86_01085 PF00440 Bacterial regulatory proteins, tetR family NYE86_01090 PF02839 Carbohydrate binding domain NYE86_01105 PF00149 Calcineurin-like phosphoesterase NYE86_01115 PF00067 Cytochrome P450 NYE86_01120 PF00296 Luciferase-like monooxygenase NYE86_01135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_01135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_01150 PF01906 Putative heavy-metal-binding NYE86_01165 PF08241 Methyltransferase domain NYE86_01165 PF13649 Methyltransferase domain NYE86_01170 PF01638 HxlR-like helix-turn-helix NYE86_01175 PF01661 Macro domain NYE86_01180 PF04978 Protein of unknown function (DUF664) NYE86_01230 PF04542 Sigma-70 region 2 NYE86_01230 PF08281 Sigma-70, region 4 NYE86_01230 PF12680 SnoaL-like domain NYE86_01240 PF01255 Putative undecaprenyl diphosphate synthase NYE86_01250 PF00141 Peroxidase NYE86_01320 PF01979 Amidohydrolase family NYE86_01325 PF09339 IclR helix-turn-helix domain NYE86_01325 PF01614 Bacterial transcriptional regulator NYE86_01330 PF02515 CoA-transferase family III NYE86_01340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NYE86_01355 PF07690 Major Facilitator Superfamily NYE86_01380 PF07690 Major Facilitator Superfamily NYE86_01405 PF07859 alpha/beta hydrolase fold NYE86_01415 PF00313 'Cold-shock' DNA-binding domain NYE86_01425 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_01425 PF00107 Zinc-binding dehydrogenase NYE86_01430 PF17964 Bacterial Ig domain NYE86_01430 PF03734 L,D-transpeptidase catalytic domain NYE86_01465 PF12419 SNF2 Helicase protein NYE86_01465 PF00176 SNF2 family N-terminal domain NYE86_01465 PF00271 Helicase conserved C-terminal domain NYE86_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_01470 PF00183 Hsp90 protein NYE86_01505 PF13977 BetI-type transcriptional repressor, C-terminal NYE86_01505 PF00440 Bacterial regulatory proteins, tetR family NYE86_01535 PF00005 ABC transporter NYE86_01545 PF04978 Protein of unknown function (DUF664) NYE86_01580 PF00440 Bacterial regulatory proteins, tetR family NYE86_01585 PF00107 Zinc-binding dehydrogenase NYE86_01585 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_01595 PF03069 Acetamidase/Formamidase family NYE86_01605 PF00575 S1 RNA binding domain NYE86_01630 PF04851 Type III restriction enzyme, res subunit NYE86_01630 PF08774 VRR-NUC domain NYE86_01635 PF01555 DNA methylase NYE86_01635 PF18273 Type III R-M EcoP15I C-terminal domain NYE86_01695 PF10518 TAT (twin-arginine translocation) pathway signal sequence NYE86_01695 PF00149 Calcineurin-like phosphoesterase NYE86_01700 PF09424 Yqey-like protein NYE86_01705 PF00912 Transglycosylase NYE86_01705 PF00905 Penicillin binding protein transpeptidase domain NYE86_01710 PF02467 Transcription factor WhiB NYE86_01715 PF02374 Anion-transporting ATPase NYE86_01715 PF17886 HSP20-like domain found in ArsA NYE86_01720 PF02374 Anion-transporting ATPase NYE86_01740 PF16123 Hydroxyacylglutathione hydrolase C-terminus NYE86_01740 PF00753 Metallo-beta-lactamase superfamily NYE86_01745 PF00067 Cytochrome P450 NYE86_01755 PF00005 ABC transporter NYE86_01755 PF13732 Domain of unknown function (DUF4162) NYE86_01770 PF00709 Adenylosuccinate synthetase NYE86_01780 PF00069 Protein kinase domain NYE86_01780 PF00400 WD domain, G-beta repeat NYE86_01785 PF00202 Aminotransferase class-III NYE86_01790 PF07729 FCD domain NYE86_01790 PF00392 Bacterial regulatory proteins, gntR family NYE86_01805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NYE86_01805 PF02843 Phosphoribosylglycinamide synthetase, C domain NYE86_01805 PF02844 Phosphoribosylglycinamide synthetase, N domain NYE86_01820 PF01259 SAICAR synthetase NYE86_01840 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NYE86_01850 PF00586 AIR synthase related protein, N-terminal domain NYE86_01850 PF02769 AIR synthase related protein, C-terminal domain NYE86_01850 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NYE86_01865 PF03704 Bacterial transcriptional activator domain NYE86_01865 PF00931 NB-ARC domain NYE86_01865 PF00486 Transcriptional regulatory protein, C terminal NYE86_01885 PF04978 Protein of unknown function (DUF664) NYE86_01960 PF01471 Putative peptidoglycan binding domain NYE86_01960 PF08291 Peptidase M15 NYE86_01985 PF00156 Phosphoribosyl transferase domain NYE86_01990 PF02769 AIR synthase related protein, C-terminal domain NYE86_01990 PF00586 AIR synthase related protein, N-terminal domain NYE86_02000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NYE86_02000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NYE86_02020 PF00271 Helicase conserved C-terminal domain NYE86_02020 PF11898 Domain of unknown function (DUF3418) NYE86_02020 PF00270 DEAD/DEAH box helicase NYE86_02020 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NYE86_02020 PF04408 Helicase associated domain (HA2) NYE86_02045 PF07883 Cupin domain NYE86_02055 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NYE86_02055 PF00400 WD domain, G-beta repeat NYE86_02065 PF08532 Beta-galactosidase trimerisation domain NYE86_02065 PF08533 Beta-galactosidase C-terminal domain NYE86_02065 PF02449 Beta-galactosidase NYE86_02070 PF01055 Glycosyl hydrolases family 31 NYE86_02075 PF00356 Bacterial regulatory proteins, lacI family NYE86_02080 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_02085 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_02095 PF14310 Fibronectin type III-like domain NYE86_02095 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_02095 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_02110 PF17841 BID domain of Bartonella effector protein (Bep) NYE86_02110 PF02661 Fic/DOC family NYE86_02125 PF00196 Bacterial regulatory proteins, luxR family NYE86_02125 PF00072 Response regulator receiver domain NYE86_02130 PF07676 WD40-like Beta Propeller Repeat NYE86_02130 PF04052 TolB amino-terminal domain NYE86_02140 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_02140 PF16450 Proteasomal ATPase OB C-terminal domain NYE86_02140 PF17758 Proteasomal ATPase OB N-terminal domain NYE86_02195 PF04717 Type VI secretion system, phage-baseplate injector NYE86_02250 PF01022 Bacterial regulatory protein, arsR family NYE86_02255 PF03704 Bacterial transcriptional activator domain NYE86_02255 PF00486 Transcriptional regulatory protein, C terminal NYE86_02255 PF00931 NB-ARC domain NYE86_02305 PF00271 Helicase conserved C-terminal domain NYE86_02305 PF00270 DEAD/DEAH box helicase NYE86_02345 PF06463 Molybdenum Cofactor Synthesis C NYE86_02345 PF04055 Radical SAM superfamily NYE86_02380 PF03091 CutA1 divalent ion tolerance protein NYE86_02385 PF00293 NUDIX domain NYE86_02390 PF00293 NUDIX domain NYE86_02420 PF03091 CutA1 divalent ion tolerance protein NYE86_02430 PF04542 Sigma-70 region 2 NYE86_02430 PF08281 Sigma-70, region 4 NYE86_02460 PF04101 Glycosyltransferase family 28 C-terminal domain NYE86_02460 PF03033 Glycosyltransferase family 28 N-terminal domain NYE86_02480 PF00196 Bacterial regulatory proteins, luxR family NYE86_02480 PF00072 Response regulator receiver domain NYE86_02515 PF06259 Alpha/beta hydrolase NYE86_02525 PF01047 MarR family NYE86_02530 PF07690 Major Facilitator Superfamily NYE86_02535 PF08329 Chitinase A, N-terminal domain NYE86_02535 PF00704 Glycosyl hydrolases family 18 NYE86_02570 PF10145 Phage-related minor tail protein NYE86_02570 PF01464 Transglycosylase SLT domain NYE86_02570 PF01551 Peptidase family M23 NYE86_02590 PF02151 UvrB/uvrC motif NYE86_02590 PF04851 Type III restriction enzyme, res subunit NYE86_02590 PF00271 Helicase conserved C-terminal domain NYE86_02590 PF17757 UvrB interaction domain NYE86_02590 PF12344 Ultra-violet resistance protein B NYE86_02605 PF02390 Putative methyltransferase NYE86_02610 PF01266 FAD dependent oxidoreductase NYE86_02625 PF00892 EamA-like transporter family NYE86_02635 PF09115 DNA polymerase III, delta subunit, C terminal NYE86_02645 PF00561 alpha/beta hydrolase fold NYE86_02670 PF00652 Ricin-type beta-trefoil lectin domain NYE86_02670 PF00331 Glycosyl hydrolase family 10 NYE86_02685 PF00106 short chain dehydrogenase NYE86_02700 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_02730 PF07690 Major Facilitator Superfamily NYE86_02745 PF00183 Hsp90 protein NYE86_02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_02755 PF07859 alpha/beta hydrolase fold NYE86_02790 PF10397 Adenylosuccinate lyase C-terminus NYE86_02790 PF00206 Lyase NYE86_02805 PF00501 AMP-binding enzyme NYE86_02805 PF13193 AMP-binding enzyme C-terminal domain NYE86_02810 PF00931 NB-ARC domain NYE86_02810 PF03704 Bacterial transcriptional activator domain NYE86_02810 PF00486 Transcriptional regulatory protein, C terminal NYE86_02815 PF16363 GDP-mannose 4,6 dehydratase NYE86_02820 PF00005 ABC transporter NYE86_02820 PF13732 Domain of unknown function (DUF4162) NYE86_02830 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NYE86_02835 PF08241 Methyltransferase domain NYE86_02840 PF00501 AMP-binding enzyme NYE86_02840 PF13193 AMP-binding enzyme C-terminal domain NYE86_02855 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_02855 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_02865 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_02865 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_02870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYE86_02880 PF00676 Dehydrogenase E1 component NYE86_02885 PF02779 Transketolase, pyrimidine binding domain NYE86_02885 PF02780 Transketolase, C-terminal domain NYE86_02890 PF00501 AMP-binding enzyme NYE86_02890 PF13193 AMP-binding enzyme C-terminal domain NYE86_02895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_02895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_02900 PF00550 Phosphopantetheine attachment site NYE86_02910 PF01070 FMN-dependent dehydrogenase NYE86_02915 PF00155 Aminotransferase class I and II NYE86_02930 PF05448 Acetyl xylan esterase (AXE1) NYE86_02935 PF00356 Bacterial regulatory proteins, lacI family NYE86_02940 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_02945 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_02950 PF01547 Bacterial extracellular solute-binding protein NYE86_02955 PF01229 Glycosyl hydrolases family 39 NYE86_02965 PF02449 Beta-galactosidase NYE86_02965 PF08532 Beta-galactosidase trimerisation domain NYE86_02965 PF08533 Beta-galactosidase C-terminal domain NYE86_02970 PF03648 Glycosyl hydrolase family 67 N-terminus NYE86_02970 PF07488 Glycosyl hydrolase family 67 middle domain NYE86_02970 PF07477 Glycosyl hydrolase family 67 C-terminus NYE86_02980 PF07728 AAA domain (dynein-related subfamily) NYE86_02980 PF08406 CbbQ/NirQ/NorQ C-terminal NYE86_02995 PF00296 Luciferase-like monooxygenase NYE86_03035 PF01547 Bacterial extracellular solute-binding protein NYE86_03050 PF00404 Dockerin type I domain NYE86_03050 PF00657 GDSL-like Lipase/Acylhydrolase NYE86_03065 PF00440 Bacterial regulatory proteins, tetR family NYE86_03065 PF17926 Tetracyclin repressor-like, C-terminal domain NYE86_03070 PF00106 short chain dehydrogenase NYE86_03075 PF18030 RimK PreATP-grasp domain NYE86_03075 PF08443 RimK-like ATP-grasp domain NYE86_03085 PF07859 alpha/beta hydrolase fold NYE86_03110 PF01738 Dienelactone hydrolase family NYE86_03120 PF07690 Major Facilitator Superfamily NYE86_03125 PF04542 Sigma-70 region 2 NYE86_03125 PF08281 Sigma-70, region 4 NYE86_03125 PF12680 SnoaL-like domain NYE86_03135 PF02416 mttA/Hcf106 family NYE86_03150 PF04264 YceI-like domain NYE86_03185 PF01569 PAP2 superfamily NYE86_03190 PF09335 SNARE associated Golgi protein NYE86_03200 PF01435 Peptidase family M48 NYE86_03215 PF03515 Colicin-like bacteriocin tRNase domain NYE86_03215 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 NYE86_03225 PF03795 YCII-related domain NYE86_03230 PF08281 Sigma-70, region 4 NYE86_03230 PF04542 Sigma-70 region 2 NYE86_03240 PF03704 Bacterial transcriptional activator domain NYE86_03240 PF00931 NB-ARC domain NYE86_03240 PF00486 Transcriptional regulatory protein, C terminal NYE86_03245 PF03704 Bacterial transcriptional activator domain NYE86_03255 PF00293 NUDIX domain NYE86_03255 PF13344 Haloacid dehalogenase-like hydrolase NYE86_03290 PF13344 Haloacid dehalogenase-like hydrolase NYE86_03290 PF00293 NUDIX domain NYE86_03300 PF03144 Elongation factor Tu domain 2 NYE86_03300 PF03143 Elongation factor Tu C-terminal domain NYE86_03300 PF00009 Elongation factor Tu GTP binding domain NYE86_03330 PF13360 PQQ-like domain NYE86_03330 PF00069 Protein kinase domain NYE86_03335 PF13520 Amino acid permease NYE86_03350 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NYE86_03355 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NYE86_03370 PF07311 Dodecin NYE86_03385 PF00282 Pyridoxal-dependent decarboxylase conserved domain NYE86_03390 PF17912 MalK OB fold domain NYE86_03390 PF00005 ABC transporter NYE86_03395 PF09335 SNARE associated Golgi protein NYE86_03405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NYE86_03410 PF00719 Inorganic pyrophosphatase NYE86_03420 PF01171 PP-loop family NYE86_03420 PF09179 TilS substrate binding domain NYE86_03425 PF00156 Phosphoribosyl transferase domain NYE86_03430 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_03430 PF17862 AAA+ lid domain NYE86_03430 PF06480 FtsH Extracellular NYE86_03430 PF01434 Peptidase family M41 NYE86_03435 PF01227 GTP cyclohydrolase I NYE86_03445 PF09924 Uncharacterised conserved protein (DUF2156) NYE86_03445 PF16995 Transmembrane region of lysyl-tRNA synthetase NYE86_03445 PF01336 OB-fold nucleic acid binding domain NYE86_03445 PF00152 tRNA synthetases class II (D, K and N) NYE86_03450 PF00809 Pterin binding enzyme NYE86_03460 PF02152 Dihydroneopterin aldolase NYE86_03465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NYE86_03485 PF00005 ABC transporter NYE86_03485 PF00571 CBS domain NYE86_03490 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_03495 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_03510 PF12680 SnoaL-like domain NYE86_03510 PF08281 Sigma-70, region 4 NYE86_03510 PF04542 Sigma-70 region 2 NYE86_03515 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NYE86_03530 PF00294 pfkB family carbohydrate kinase NYE86_03535 PF07969 Amidohydrolase family NYE86_03540 PF00480 ROK family NYE86_03570 PF00982 Glycosyltransferase family 20 NYE86_03575 PF00535 Glycosyl transferase family 2 NYE86_03580 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_03585 PF02597 ThiS family NYE86_03590 PF00313 'Cold-shock' DNA-binding domain NYE86_03595 PF00118 TCP-1/cpn60 chaperonin family NYE86_03605 PF01380 SIS domain NYE86_03610 PF01418 Helix-turn-helix domain, rpiR family NYE86_03610 PF01380 SIS domain NYE86_03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_03625 PF00183 Hsp90 protein NYE86_03650 PF00113 Enolase, C-terminal TIM barrel domain NYE86_03650 PF03952 Enolase, N-terminal domain NYE86_03680 PF00005 ABC transporter NYE86_03685 PF03932 CutC family NYE86_03690 PF13538 UvrD-like helicase C-terminal domain NYE86_03705 PF04542 Sigma-70 region 2 NYE86_03705 PF04545 Sigma-70, region 4 NYE86_03715 PF04851 Type III restriction enzyme, res subunit NYE86_03715 PF00271 Helicase conserved C-terminal domain NYE86_03745 PF01497 Periplasmic binding protein NYE86_03750 PF00005 ABC transporter NYE86_03755 PF01032 FecCD transport family NYE86_03760 PF01032 FecCD transport family NYE86_03780 PF02621 Menaquinone biosynthesis NYE86_03785 PF01048 Phosphorylase superfamily NYE86_03795 PF07690 Major Facilitator Superfamily NYE86_03820 PF00860 Permease family NYE86_03830 PF01047 MarR family NYE86_03835 PF05977 Transmembrane secretion effector NYE86_03845 PF00248 Aldo/keto reductase family NYE86_03850 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYE86_03850 PF07504 Fungalysin/Thermolysin Propeptide Motif NYE86_03850 PF01483 Proprotein convertase P-domain NYE86_03850 PF01447 Thermolysin metallopeptidase, catalytic domain NYE86_03870 PF00266 Aminotransferase class-V NYE86_03875 PF13183 4Fe-4S dicluster domain NYE86_03875 PF02913 FAD linked oxidases, C-terminal domain NYE86_03875 PF01565 FAD binding domain NYE86_03880 PF00285 Citrate synthase, C-terminal domain NYE86_03885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NYE86_03885 PF01243 Pyridoxamine 5'-phosphate oxidase NYE86_03895 PF13580 SIS domain NYE86_03900 PF02742 Iron dependent repressor, metal binding and dimerisation domain NYE86_03900 PF01325 Iron dependent repressor, N-terminal DNA binding domain NYE86_03900 PF18357 Diphteria toxin repressor SH3 domain NYE86_03905 PF12697 Alpha/beta hydrolase family NYE86_03920 PF01580 FtsK/SpoIIIE family NYE86_03920 PF12538 DNA transporter NYE86_03935 PF00437 Type II/IV secretion system protein NYE86_03980 PF07690 Major Facilitator Superfamily NYE86_03990 PF00005 ABC transporter NYE86_03990 PF13732 Domain of unknown function (DUF4162) NYE86_04020 PF00551 Formyl transferase NYE86_04035 PF01740 STAS domain NYE86_04045 PF01965 DJ-1/PfpI family NYE86_04045 PF12833 Helix-turn-helix domain NYE86_04065 PF00440 Bacterial regulatory proteins, tetR family NYE86_04075 PF00069 Protein kinase domain NYE86_04075 PF13360 PQQ-like domain NYE86_04090 PF00486 Transcriptional regulatory protein, C terminal NYE86_04090 PF03704 Bacterial transcriptional activator domain NYE86_04090 PF00931 NB-ARC domain NYE86_04115 PF04055 Radical SAM superfamily NYE86_04125 PF03747 ADP-ribosylglycohydrolase NYE86_04135 PF00155 Aminotransferase class I and II NYE86_04155 PF00768 D-alanyl-D-alanine carboxypeptidase NYE86_04165 PF00403 Heavy-metal-associated domain NYE86_04185 PF02261 Aspartate decarboxylase NYE86_04200 PF00849 RNA pseudouridylate synthase NYE86_04215 PF13580 SIS domain NYE86_04225 PF00501 AMP-binding enzyme NYE86_04225 PF13193 AMP-binding enzyme C-terminal domain NYE86_04225 PF00668 Condensation domain NYE86_04225 PF00550 Phosphopantetheine attachment site NYE86_04230 PF00535 Glycosyl transferase family 2 NYE86_04235 PF13419 Haloacid dehalogenase-like hydrolase NYE86_04240 PF13193 AMP-binding enzyme C-terminal domain NYE86_04240 PF00501 AMP-binding enzyme NYE86_04240 PF00668 Condensation domain NYE86_04240 PF00550 Phosphopantetheine attachment site NYE86_04245 PF07993 Male sterility protein NYE86_04245 PF00668 Condensation domain NYE86_04245 PF13193 AMP-binding enzyme C-terminal domain NYE86_04245 PF00501 AMP-binding enzyme NYE86_04245 PF00550 Phosphopantetheine attachment site NYE86_04250 PF13193 AMP-binding enzyme C-terminal domain NYE86_04250 PF00501 AMP-binding enzyme NYE86_04255 PF00501 AMP-binding enzyme NYE86_04255 PF00975 Thioesterase domain NYE86_04255 PF13193 AMP-binding enzyme C-terminal domain NYE86_04255 PF00550 Phosphopantetheine attachment site NYE86_04255 PF00668 Condensation domain NYE86_04265 PF00107 Zinc-binding dehydrogenase NYE86_04265 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_04270 PF00296 Luciferase-like monooxygenase NYE86_04275 PF03358 NADPH-dependent FMN reductase NYE86_04285 PF07690 Major Facilitator Superfamily NYE86_04290 PF00005 ABC transporter NYE86_04305 PF07690 Major Facilitator Superfamily NYE86_04315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NYE86_04325 PF04542 Sigma-70 region 2 NYE86_04325 PF04539 Sigma-70 region 3 NYE86_04325 PF04545 Sigma-70, region 4 NYE86_04325 PF00140 Sigma-70 factor, region 1.2 NYE86_04340 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_04350 PF01741 Large-conductance mechanosensitive channel, MscL NYE86_04360 PF01048 Phosphorylase superfamily NYE86_04375 PF03471 Transporter associated domain NYE86_04375 PF00999 Sodium/hydrogen exchanger family NYE86_04375 PF02080 TrkA-C domain NYE86_04380 PF01804 Penicillin amidase NYE86_04385 PF01812 5-formyltetrahydrofolate cyclo-ligase family NYE86_04390 PF00483 Nucleotidyl transferase NYE86_04395 PF03453 MoeA N-terminal region (domain I and II) NYE86_04395 PF00994 Probable molybdopterin binding domain NYE86_04395 PF03454 MoeA C-terminal region (domain IV) NYE86_04400 PF01967 MoaC family NYE86_04405 PF00994 Probable molybdopterin binding domain NYE86_04410 PF13302 Acetyltransferase (GNAT) domain NYE86_04425 PF03547 Membrane transport protein NYE86_04430 PF00925 GTP cyclohydrolase II NYE86_04435 PF00440 Bacterial regulatory proteins, tetR family NYE86_04435 PF16859 Tetracyclin repressor-like, C-terminal domain NYE86_04440 PF03176 MMPL family NYE86_04450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NYE86_04450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NYE86_04455 PF12833 Helix-turn-helix domain NYE86_04455 PF00730 HhH-GPD superfamily base excision DNA repair protein NYE86_04455 PF06029 AlkA N-terminal domain NYE86_04455 PF02805 Metal binding domain of Ada NYE86_04465 PF10944 Protein of unknown function (DUF2630) NYE86_04475 PF00743 Flavin-binding monooxygenase-like NYE86_04480 PF00561 alpha/beta hydrolase fold NYE86_04495 PF04493 Endonuclease V NYE86_04500 PF03572 Peptidase family S41 NYE86_04500 PF14684 Tricorn protease C1 domain NYE86_04500 PF14685 Tricorn protease PDZ domain NYE86_04500 PF07676 WD40-like Beta Propeller Repeat NYE86_04510 PF00890 FAD binding domain NYE86_04515 PF00553 Cellulose binding domain NYE86_04515 PF00041 Fibronectin type III domain NYE86_04515 PF01341 Glycosyl hydrolases family 6 NYE86_04560 PF00067 Cytochrome P450 NYE86_04570 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase NYE86_04570 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NYE86_04585 PF01026 TatD related DNase NYE86_04595 PF00398 Ribosomal RNA adenine dimethylase NYE86_04600 PF08544 GHMP kinases C terminal NYE86_04600 PF00288 GHMP kinases N terminal domain NYE86_04605 PF00005 ABC transporter NYE86_04605 PF12848 ABC transporter NYE86_04605 PF16326 ABC transporter C-terminal domain NYE86_04615 PF00196 Bacterial regulatory proteins, luxR family NYE86_04615 PF00072 Response regulator receiver domain NYE86_04620 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NYE86_04620 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NYE86_04625 PF16363 GDP-mannose 4,6 dehydratase NYE86_04630 PF00288 GHMP kinases N terminal domain NYE86_04630 PF10509 Galactokinase galactose-binding signature NYE86_04630 PF08544 GHMP kinases C terminal NYE86_04635 PF00196 Bacterial regulatory proteins, luxR family NYE86_04635 PF00072 Response regulator receiver domain NYE86_04640 PF01047 MarR family NYE86_04645 PF13649 Methyltransferase domain NYE86_04655 PF01195 Peptidyl-tRNA hydrolase NYE86_04660 PF01386 Ribosomal L25p family NYE86_04660 PF14693 Ribosomal protein TL5, C-terminal domain NYE86_04665 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NYE86_04665 PF14572 Phosphoribosyl synthetase-associated domain NYE86_04670 PF12804 MobA-like NTP transferase domain NYE86_04670 PF00132 Bacterial transferase hexapeptide (six repeats) NYE86_04685 PF17932 Tetracyclin repressor-like, C-terminal domain NYE86_04685 PF00440 Bacterial regulatory proteins, tetR family NYE86_04690 PF00311 Phosphoenolpyruvate carboxylase NYE86_04695 PF07730 Histidine kinase NYE86_04735 PF00005 ABC transporter NYE86_04740 PF00005 ABC transporter NYE86_04740 PF02687 FtsX-like permease family NYE86_04740 PF12704 MacB-like periplasmic core domain NYE86_04745 PF17757 UvrB interaction domain NYE86_04745 PF03461 TRCF domain NYE86_04745 PF00271 Helicase conserved C-terminal domain NYE86_04745 PF00270 DEAD/DEAH box helicase NYE86_04745 PF02559 CarD-like/TRCF domain NYE86_04750 PF07676 WD40-like Beta Propeller Repeat NYE86_04775 PF03793 PASTA domain NYE86_04775 PF00069 Protein kinase domain NYE86_04795 PF03819 MazG nucleotide pyrophosphohydrolase domain NYE86_04800 PF00067 Cytochrome P450 NYE86_04805 PF06737 Transglycosylase-like domain NYE86_04805 PF07501 G5 domain NYE86_04805 PF03990 G5-linked-Ubiquitin-like domain NYE86_04810 PF01476 LysM domain NYE86_04810 PF06737 Transglycosylase-like domain NYE86_04815 PF00113 Enolase, C-terminal TIM barrel domain NYE86_04815 PF03952 Enolase, N-terminal domain NYE86_04830 PF02541 Ppx/GppA phosphatase family NYE86_04850 PF01593 Flavin containing amine oxidoreductase NYE86_04880 PF00108 Thiolase, N-terminal domain NYE86_04880 PF02803 Thiolase, C-terminal domain NYE86_04885 PF13472 GDSL-like Lipase/Acylhydrolase family NYE86_04890 PF00571 CBS domain NYE86_04890 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_04900 PF13193 AMP-binding enzyme C-terminal domain NYE86_04900 PF00501 AMP-binding enzyme NYE86_04905 PF03176 MMPL family NYE86_04925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NYE86_04925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NYE86_04930 PF17391 Urocanase N-terminal domain NYE86_04930 PF01175 Urocanase Rossmann-like domain NYE86_04930 PF17392 Urocanase C-terminal domain NYE86_04935 PF01546 Peptidase family M20/M25/M40 NYE86_04945 PF01979 Amidohydrolase family NYE86_04950 PF04542 Sigma-70 region 2 NYE86_04950 PF04539 Sigma-70 region 3 NYE86_04950 PF04545 Sigma-70, region 4 NYE86_04965 PF00392 Bacterial regulatory proteins, gntR family NYE86_04975 PF00072 Response regulator receiver domain NYE86_04975 PF00486 Transcriptional regulatory protein, C terminal NYE86_04980 PF00672 HAMP domain NYE86_04980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_04980 PF00512 His Kinase A (phospho-acceptor) domain NYE86_04990 PF02222 ATP-grasp domain NYE86_04990 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NYE86_04995 PF00731 AIR carboxylase NYE86_05015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYE86_05015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYE86_05015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYE86_05020 PF03816 Cell envelope-related transcriptional attenuator domain NYE86_05025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_05025 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_05025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_05035 PF03816 Cell envelope-related transcriptional attenuator domain NYE86_05045 PF03816 Cell envelope-related transcriptional attenuator domain NYE86_05055 PF03816 Cell envelope-related transcriptional attenuator domain NYE86_05070 PF03816 Cell envelope-related transcriptional attenuator domain NYE86_05085 PF00881 Nitroreductase family NYE86_05085 PF01996 F420-0:Gamma-glutamyl ligase NYE86_05090 PF01933 Uncharacterised protein family UPF0052 NYE86_05100 PF02467 Transcription factor WhiB NYE86_05105 PF00535 Glycosyl transferase family 2 NYE86_05125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NYE86_05125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NYE86_05125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NYE86_05125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NYE86_05130 PF03966 Trm112p-like protein NYE86_05140 PF01238 Phosphomannose isomerase type I NYE86_05150 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NYE86_05150 PF05221 S-adenosyl-L-homocysteine hydrolase NYE86_05185 PF00072 Response regulator receiver domain NYE86_05185 PF00486 Transcriptional regulatory protein, C terminal NYE86_05190 PF00672 HAMP domain NYE86_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_05190 PF00512 His Kinase A (phospho-acceptor) domain NYE86_05195 PF10646 Sporulation and spore germination NYE86_05195 PF10647 Lipoprotein LpqB beta-propeller domain NYE86_05205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NYE86_05205 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NYE86_05210 PF00196 Bacterial regulatory proteins, luxR family NYE86_05210 PF00072 Response regulator receiver domain NYE86_05215 PF06224 Winged helix DNA-binding domain NYE86_05225 PF01043 SecA preprotein cross-linking domain NYE86_05225 PF07516 SecA Wing and Scaffold domain NYE86_05225 PF07517 SecA DEAD-like domain NYE86_05245 PF05088 Bacterial NAD-glutamate dehydrogenase NYE86_05250 PF00400 WD domain, G-beta repeat NYE86_05250 PF00069 Protein kinase domain NYE86_05270 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NYE86_05275 PF04321 RmlD substrate binding domain NYE86_05280 PF16363 GDP-mannose 4,6 dehydratase NYE86_05285 PF00483 Nucleotidyl transferase NYE86_05300 PF00535 Glycosyl transferase family 2 NYE86_05315 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NYE86_05320 PF01501 Glycosyl transferase family 8 NYE86_05320 PF00535 Glycosyl transferase family 2 NYE86_05325 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NYE86_05330 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NYE86_05340 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_05345 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_05355 PF01580 FtsK/SpoIIIE family NYE86_05370 PF00472 RF-1 domain NYE86_05370 PF03462 PCRF domain NYE86_05430 PF00005 ABC transporter NYE86_05435 PF02687 FtsX-like permease family NYE86_05435 PF18075 FtsX extracellular domain NYE86_05440 PF03572 Peptidase family S41 NYE86_05440 PF13180 PDZ domain NYE86_05445 PF01668 SmpB protein NYE86_05455 PF07690 Major Facilitator Superfamily NYE86_05470 PF13538 UvrD-like helicase C-terminal domain NYE86_05475 PF00390 Malic enzyme, N-terminal domain NYE86_05475 PF03949 Malic enzyme, NAD binding domain NYE86_05480 PF00216 Bacterial DNA-binding protein NYE86_05485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NYE86_05490 PF02622 Uncharacterized ACR, COG1678 NYE86_05505 PF00728 Glycosyl hydrolase family 20, catalytic domain NYE86_05505 PF02838 Glycosyl hydrolase family 20, domain 2 NYE86_05505 PF07691 PA14 domain NYE86_05510 PF03450 CO dehydrogenase flavoprotein C-terminal domain NYE86_05510 PF00941 FAD binding domain in molybdopterin dehydrogenase NYE86_05520 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NYE86_05520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NYE86_05540 PF04851 Type III restriction enzyme, res subunit NYE86_05570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYE86_05575 PF02913 FAD linked oxidases, C-terminal domain NYE86_05575 PF01565 FAD binding domain NYE86_05580 PF04686 Streptomyces sporulation and cell division protein, SsgA NYE86_05595 PF00801 PKD domain NYE86_05595 PF05547 Immune inhibitor A peptidase M6 NYE86_05605 PF00857 Isochorismatase family NYE86_05610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NYE86_05610 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NYE86_05615 PF02617 ATP-dependent Clp protease adaptor protein ClpS NYE86_05630 PF14464 Prokaryotic homologs of the JAB domain NYE86_05635 PF02597 ThiS family NYE86_05640 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_05645 PF12706 Beta-lactamase superfamily domain NYE86_05650 PF02378 Phosphotransferase system, EIIC NYE86_05655 PF02378 Phosphotransferase system, EIIC NYE86_05660 PF00367 phosphotransferase system, EIIB NYE86_05665 PF01138 3' exoribonuclease family, domain 1 NYE86_05665 PF03725 3' exoribonuclease family, domain 2 NYE86_05670 PF01725 Ham1 family NYE86_05690 PF00578 AhpC/TSA family NYE86_05705 PF00912 Transglycosylase NYE86_05705 PF00905 Penicillin binding protein transpeptidase domain NYE86_05720 PF13732 Domain of unknown function (DUF4162) NYE86_05720 PF00005 ABC transporter NYE86_05735 PF00107 Zinc-binding dehydrogenase NYE86_05745 PF04286 Protein of unknown function (DUF445) NYE86_05750 PF01557 Fumarylacetoacetate (FAA) hydrolase family NYE86_05755 PF03928 Haem-degrading NYE86_05760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_05760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_05770 PF13344 Haloacid dehalogenase-like hydrolase NYE86_05790 PF13183 4Fe-4S dicluster domain NYE86_05790 PF01565 FAD binding domain NYE86_05790 PF02913 FAD linked oxidases, C-terminal domain NYE86_05820 PF00296 Luciferase-like monooxygenase NYE86_05825 PF00553 Cellulose binding domain NYE86_05825 PF00041 Fibronectin type III domain NYE86_05825 PF00704 Glycosyl hydrolases family 18 NYE86_05830 PF00563 EAL domain NYE86_05830 PF00990 Diguanylate cyclase, GGDEF domain NYE86_05830 PF03707 Bacterial signalling protein N terminal repeat NYE86_05850 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_05855 PF08361 MAATS-type transcriptional repressor, C-terminal region NYE86_05855 PF00440 Bacterial regulatory proteins, tetR family NYE86_05895 PF01336 OB-fold nucleic acid binding domain NYE86_05895 PF16995 Transmembrane region of lysyl-tRNA synthetase NYE86_05895 PF00152 tRNA synthetases class II (D, K and N) NYE86_05895 PF09924 Uncharacterised conserved protein (DUF2156) NYE86_05900 PF00561 alpha/beta hydrolase fold NYE86_05925 PF00486 Transcriptional regulatory protein, C terminal NYE86_05925 PF00072 Response regulator receiver domain NYE86_05930 PF16750 Sensor domain of 2-component histidine kinase NYE86_05930 PF00512 His Kinase A (phospho-acceptor) domain NYE86_05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_05930 PF00672 HAMP domain NYE86_05935 PF02839 Carbohydrate binding domain NYE86_05940 PF00232 Glycosyl hydrolase family 1 NYE86_05945 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_05950 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_05960 PF00356 Bacterial regulatory proteins, lacI family NYE86_05980 PF00553 Cellulose binding domain NYE86_05980 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_05985 PF00553 Cellulose binding domain NYE86_05985 PF00041 Fibronectin type III domain NYE86_05985 PF02011 Glycosyl hydrolase family 48 NYE86_05990 PF03900 Porphobilinogen deaminase, C-terminal domain NYE86_05990 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NYE86_06000 PF00929 Exonuclease NYE86_06010 PF01965 DJ-1/PfpI family NYE86_06010 PF12833 Helix-turn-helix domain NYE86_06015 PF00582 Universal stress protein family NYE86_06020 PF01380 SIS domain NYE86_06030 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_06030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_06030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_06035 PF00682 HMGL-like NYE86_06040 PF00289 Biotin carboxylase, N-terminal domain NYE86_06040 PF02785 Biotin carboxylase C-terminal domain NYE86_06040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYE86_06040 PF00364 Biotin-requiring enzyme NYE86_06045 PF01039 Carboxyl transferase domain NYE86_06050 PF00440 Bacterial regulatory proteins, tetR family NYE86_06055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_06055 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_06055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_06065 PF07730 Histidine kinase NYE86_06070 PF00072 Response regulator receiver domain NYE86_06070 PF00196 Bacterial regulatory proteins, luxR family NYE86_06075 PF15698 Phosphatase NYE86_06080 PF00491 Arginase family NYE86_06085 PF00005 ABC transporter NYE86_06085 PF00664 ABC transporter transmembrane region NYE86_06090 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_06090 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_06160 PF12848 ABC transporter NYE86_06160 PF00005 ABC transporter NYE86_06195 PF01252 Signal peptidase (SPase) II NYE86_06210 PF00196 Bacterial regulatory proteins, luxR family NYE86_06215 PF00196 Bacterial regulatory proteins, luxR family NYE86_06235 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_06240 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_06240 PF12911 N-terminal TM domain of oligopeptide transport permease C NYE86_06245 PF00005 ABC transporter NYE86_06245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_06250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYE86_06290 PF00356 Bacterial regulatory proteins, lacI family NYE86_06295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_06295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_06310 PF14490 Helix-hairpin-helix containing domain NYE86_06310 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NYE86_06310 PF13538 UvrD-like helicase C-terminal domain NYE86_06315 PF00285 Citrate synthase, C-terminal domain NYE86_06335 PF03176 MMPL family NYE86_06345 PF01116 Fructose-bisphosphate aldolase class-II NYE86_06350 PF01380 SIS domain NYE86_06360 PF12802 MarR family NYE86_06385 PF00436 Single-strand binding protein family NYE86_06395 PF00005 ABC transporter NYE86_06395 PF12848 ABC transporter NYE86_06410 PF00005 ABC transporter NYE86_06410 PF02687 FtsX-like permease family NYE86_06410 PF12704 MacB-like periplasmic core domain NYE86_06425 PF01152 Bacterial-like globin NYE86_06450 PF16918 Protein kinase G tetratricopeptide repeat NYE86_06450 PF16919 Protein kinase G rubredoxin domain NYE86_06450 PF00069 Protein kinase domain NYE86_06460 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYE86_06475 PF11975 Family 4 glycosyl hydrolase C-terminal domain NYE86_06475 PF02056 Family 4 glycosyl hydrolase NYE86_06480 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_06485 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_06500 PF00924 Mechanosensitive ion channel NYE86_06510 PF11838 ERAP1-like C-terminal domain NYE86_06510 PF01433 Peptidase family M1 domain NYE86_06535 PF02446 4-alpha-glucanotransferase NYE86_06540 PF12704 MacB-like periplasmic core domain NYE86_06540 PF02687 FtsX-like permease family NYE86_06540 PF00005 ABC transporter NYE86_06560 PF11838 ERAP1-like C-terminal domain NYE86_06560 PF01433 Peptidase family M1 domain NYE86_06565 PF01323 DSBA-like thioredoxin domain NYE86_06570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYE86_06580 PF02502 Ribose/Galactose Isomerase NYE86_06585 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NYE86_06585 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NYE86_06585 PF06827 Zinc finger found in FPG and IleRS NYE86_06590 PF17668 Acetyltransferase (GNAT) domain NYE86_06590 PF13530 Sterol carrier protein domain NYE86_06605 PF00710 Asparaginase, N-terminal NYE86_06605 PF17763 Glutaminase/Asparaginase C-terminal domain NYE86_06610 PF01037 Lrp/AsnC ligand binding domain NYE86_06625 PF05698 Bacterial trigger factor protein (TF) C-terminus NYE86_06625 PF05697 Bacterial trigger factor protein (TF) NYE86_06625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NYE86_06630 PF00574 Clp protease NYE86_06635 PF00574 Clp protease NYE86_06640 PF07724 AAA domain (Cdc48 subfamily) NYE86_06640 PF10431 C-terminal, D2-small domain, of ClpB protein NYE86_06640 PF06689 ClpX C4-type zinc finger NYE86_06655 PF08264 Anticodon-binding domain of tRNA NYE86_06655 PF10458 Valyl tRNA synthetase tRNA binding arm NYE86_06655 PF00133 tRNA synthetases class I (I, L, M and V) NYE86_06660 PF02875 Mur ligase family, glutamate ligase domain NYE86_06660 PF08245 Mur ligase middle domain NYE86_06670 PF00334 Nucleoside diphosphate kinase NYE86_06690 PF00905 Penicillin binding protein transpeptidase domain NYE86_06690 PF03717 Penicillin-binding Protein dimerisation domain NYE86_06695 PF01098 Cell cycle protein NYE86_06700 PF05235 CHAD domain NYE86_06700 PF01928 CYTH domain NYE86_06740 PF10150 Ribonuclease E/G family NYE86_06745 PF00829 Ribosomal prokaryotic L21 protein NYE86_06750 PF01016 Ribosomal L27 protein NYE86_06755 PF01926 50S ribosome-binding GTPase NYE86_06755 PF09269 Domain of unknown function (DUF1967) NYE86_06755 PF01018 GTP1/OBG NYE86_06760 PF00535 Glycosyl transferase family 2 NYE86_06765 PF00535 Glycosyl transferase family 2 NYE86_06765 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NYE86_06770 PF13439 Glycosyltransferase Family 4 NYE86_06770 PF00534 Glycosyl transferases group 1 NYE86_06780 PF00132 Bacterial transferase hexapeptide (six repeats) NYE86_06790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYE86_06790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYE86_06790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYE86_06795 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 NYE86_06795 PF00535 Glycosyl transferase family 2 NYE86_06810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYE86_06820 PF00535 Glycosyl transferase family 2 NYE86_06830 PF01370 NAD dependent epimerase/dehydratase family NYE86_06835 PF01472 PUA domain NYE86_06835 PF00696 Amino acid kinase family NYE86_06845 PF00171 Aldehyde dehydrogenase family NYE86_06860 PF01435 Peptidase family M48 NYE86_06870 PF01467 Cytidylyltransferase-like NYE86_06885 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_06900 PF07690 Major Facilitator Superfamily NYE86_06905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NYE86_06915 PF00293 NUDIX domain NYE86_06915 PF13344 Haloacid dehalogenase-like hydrolase NYE86_06945 PF13603 Leucyl-tRNA synthetase, Domain 2 NYE86_06945 PF08264 Anticodon-binding domain of tRNA NYE86_06945 PF09334 tRNA synthetases class I (M) NYE86_06955 PF02645 Uncharacterised protein, DegV family COG1307 NYE86_06995 PF01649 Ribosomal protein S20 NYE86_07000 PF03144 Elongation factor Tu domain 2 NYE86_07000 PF06421 GTP-binding protein LepA C-terminus NYE86_07000 PF00679 Elongation factor G C-terminus NYE86_07000 PF00009 Elongation factor Tu GTP binding domain NYE86_07005 PF00501 AMP-binding enzyme NYE86_07015 PF04055 Radical SAM superfamily NYE86_07025 PF00753 Metallo-beta-lactamase superfamily NYE86_07030 PF01628 HrcA protein C terminal domain NYE86_07035 PF00226 DnaJ domain NYE86_07035 PF01556 DnaJ C terminal domain NYE86_07035 PF00684 DnaJ central domain NYE86_07040 PF03060 Nitronate monooxygenase NYE86_07045 PF04452 RNA methyltransferase NYE86_07060 PF01613 Flavin reductase like domain NYE86_07080 PF01230 HIT domain NYE86_07085 PF12706 Beta-lactamase superfamily domain NYE86_07085 PF00753 Metallo-beta-lactamase superfamily NYE86_07095 PF02056 Family 4 glycosyl hydrolase NYE86_07095 PF11975 Family 4 glycosyl hydrolase C-terminal domain NYE86_07100 PF00294 pfkB family carbohydrate kinase NYE86_07100 PF01467 Cytidylyltransferase-like NYE86_07105 PF02562 PhoH-like protein NYE86_07110 PF02130 Uncharacterized protein family UPF0054 NYE86_07115 PF01595 Cyclin M transmembrane N-terminal domain NYE86_07115 PF03471 Transporter associated domain NYE86_07115 PF00571 CBS domain NYE86_07135 PF00543 Nitrogen regulatory protein P-II NYE86_07140 PF00909 Ammonium Transporter Family NYE86_07145 PF01926 50S ribosome-binding GTPase NYE86_07145 PF07650 KH domain NYE86_07155 PF07690 Major Facilitator Superfamily NYE86_07165 PF01464 Transglycosylase SLT domain NYE86_07190 PF01447 Thermolysin metallopeptidase, catalytic domain NYE86_07190 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYE86_07190 PF16485 Protealysin propeptide NYE86_07195 PF00682 HMGL-like NYE86_07195 PF08502 LeuA allosteric (dimerisation) domain NYE86_07205 PF03176 MMPL family NYE86_07210 PF07730 Histidine kinase NYE86_07215 PF00196 Bacterial regulatory proteins, luxR family NYE86_07215 PF00072 Response regulator receiver domain NYE86_07220 PF02565 Recombination protein O C terminal NYE86_07220 PF11967 Recombination protein O N terminal NYE86_07225 PF01255 Putative undecaprenyl diphosphate synthase NYE86_07230 PF01475 Ferric uptake regulator family NYE86_07235 PF00950 ABC 3 transport family NYE86_07240 PF00005 ABC transporter NYE86_07245 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NYE86_07245 PF01297 Zinc-uptake complex component A periplasmic NYE86_07250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYE86_07250 PF03129 Anticodon binding domain NYE86_07260 PF07690 Major Facilitator Superfamily NYE86_07270 PF17754 MftR C-terminal domain NYE86_07270 PF00440 Bacterial regulatory proteins, tetR family NYE86_07280 PF07690 Major Facilitator Superfamily NYE86_07285 PF01207 Dihydrouridine synthase (Dus) NYE86_07290 PF00391 PEP-utilising enzyme, mobile domain NYE86_07290 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NYE86_07290 PF02896 PEP-utilising enzyme, TIM barrel domain NYE86_07300 PF00356 Bacterial regulatory proteins, lacI family NYE86_07305 PF00553 Cellulose binding domain NYE86_07305 PF00331 Glycosyl hydrolase family 10 NYE86_07315 PF13806 Rieske-like [2Fe-2S] domain NYE86_07315 PF04324 BFD-like [2Fe-2S] binding domain NYE86_07315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NYE86_07315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NYE86_07315 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_07315 PF18267 Rubredoxin NAD+ reductase C-terminal domain NYE86_07325 PF01965 DJ-1/PfpI family NYE86_07335 PF00392 Bacterial regulatory proteins, gntR family NYE86_07335 PF07729 FCD domain NYE86_07340 PF02698 DUF218 domain NYE86_07360 PF01966 HD domain NYE86_07360 PF13286 Phosphohydrolase-associated domain NYE86_07365 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_07365 PF14759 Reductase C-terminal NYE86_07375 PF10410 DnaB-helicase binding domain of primase NYE86_07375 PF08278 DNA primase DnaG DnaB-binding NYE86_07375 PF13662 Toprim domain NYE86_07375 PF08275 DNA primase catalytic core, N-terminal domain NYE86_07375 PF01807 CHC2 zinc finger NYE86_07380 PF00140 Sigma-70 factor, region 1.2 NYE86_07380 PF04542 Sigma-70 region 2 NYE86_07380 PF04539 Sigma-70 region 3 NYE86_07380 PF04545 Sigma-70, region 4 NYE86_07385 PF05368 NmrA-like family NYE86_07400 PF00296 Luciferase-like monooxygenase NYE86_07405 PF07690 Major Facilitator Superfamily NYE86_07410 PF01638 HxlR-like helix-turn-helix NYE86_07415 PF07690 Major Facilitator Superfamily NYE86_07430 PF00005 ABC transporter NYE86_07430 PF00664 ABC transporter transmembrane region NYE86_07435 PF00664 ABC transporter transmembrane region NYE86_07435 PF00005 ABC transporter NYE86_07440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYE86_07440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYE86_07560 PF00561 alpha/beta hydrolase fold NYE86_07565 PF00480 ROK family NYE86_07570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_07570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_07595 PF16919 Protein kinase G rubredoxin domain NYE86_07595 PF00069 Protein kinase domain NYE86_07595 PF16918 Protein kinase G tetratricopeptide repeat NYE86_07605 PF01547 Bacterial extracellular solute-binding protein NYE86_07610 PF02566 OsmC-like protein NYE86_07615 PF16884 N-terminal domain of oxidoreductase NYE86_07615 PF00107 Zinc-binding dehydrogenase NYE86_07625 PF03239 Iron permease FTR1 family NYE86_07630 PF13473 Cupredoxin-like domain NYE86_07630 PF09375 Imelysin NYE86_07635 PF10518 TAT (twin-arginine translocation) pathway signal sequence NYE86_07635 PF04261 Dyp-type peroxidase family NYE86_07640 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_07640 PF00107 Zinc-binding dehydrogenase NYE86_07645 PF14310 Fibronectin type III-like domain NYE86_07645 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_07645 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_07645 PF07691 PA14 domain NYE86_07650 PF07690 Major Facilitator Superfamily NYE86_07670 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_07670 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_07675 PF00550 Phosphopantetheine attachment site NYE86_07680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_07680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_07685 PF00698 Acyl transferase domain NYE86_07690 PF17853 GGDEF-like domain NYE86_07690 PF13556 PucR C-terminal helix-turn-helix domain NYE86_07705 PF13411 MerR HTH family regulatory protein NYE86_07710 PF00248 Aldo/keto reductase family NYE86_07720 PF06259 Alpha/beta hydrolase NYE86_07725 PF00456 Transketolase, thiamine diphosphate binding domain NYE86_07725 PF17831 Pyruvate dehydrogenase E1 component middle domain NYE86_07730 PF11253 Protein of unknown function (DUF3052) NYE86_07735 PF00578 AhpC/TSA family NYE86_07740 PF02342 TerD domain NYE86_07745 PF02342 TerD domain NYE86_07755 PF02342 TerD domain NYE86_07770 PF11202 Phosphoribosyl transferase (PRTase) NYE86_07770 PF15608 PELOTA RNA binding domain NYE86_07780 PF00485 Phosphoribulokinase / Uridine kinase family NYE86_07785 PF01596 O-methyltransferase NYE86_07810 PF00664 ABC transporter transmembrane region NYE86_07810 PF00005 ABC transporter NYE86_07815 PF00005 ABC transporter NYE86_07815 PF00664 ABC transporter transmembrane region NYE86_07820 PF02223 Thymidylate kinase NYE86_07835 PF00676 Dehydrogenase E1 component NYE86_07840 PF02780 Transketolase, C-terminal domain NYE86_07840 PF02779 Transketolase, pyrimidine binding domain NYE86_07845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NYE86_07845 PF02817 e3 binding domain NYE86_07845 PF00364 Biotin-requiring enzyme NYE86_07850 PF13193 AMP-binding enzyme C-terminal domain NYE86_07850 PF00501 AMP-binding enzyme NYE86_07850 PF00550 Phosphopantetheine attachment site NYE86_07850 PF00668 Condensation domain NYE86_07900 PF13419 Haloacid dehalogenase-like hydrolase NYE86_07910 PF01471 Putative peptidoglycan binding domain NYE86_07910 PF07486 Cell Wall Hydrolase NYE86_07915 PF07690 Major Facilitator Superfamily NYE86_07930 PF00005 ABC transporter NYE86_07960 PF00069 Protein kinase domain NYE86_07970 PF00664 ABC transporter transmembrane region NYE86_07970 PF00005 ABC transporter NYE86_07985 PF00196 Bacterial regulatory proteins, luxR family NYE86_07995 PF00106 short chain dehydrogenase NYE86_08000 PF17925 Tetracyclin repressor-like, C-terminal domain NYE86_08000 PF00440 Bacterial regulatory proteins, tetR family NYE86_08005 PF13439 Glycosyltransferase Family 4 NYE86_08010 PF01209 ubiE/COQ5 methyltransferase family NYE86_08035 PF01520 N-acetylmuramoyl-L-alanine amidase NYE86_08045 PF07690 Major Facilitator Superfamily NYE86_08050 PF00072 Response regulator receiver domain NYE86_08050 PF00196 Bacterial regulatory proteins, luxR family NYE86_08090 PF00005 ABC transporter NYE86_08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_08100 PF07730 Histidine kinase NYE86_08115 PF01497 Periplasmic binding protein NYE86_08120 PF01784 NIF3 (NGG1p interacting factor 3) NYE86_08135 PF01081 KDPG and KHG aldolase NYE86_08140 PF03883 Peroxide stress protein YaaA NYE86_08175 PF13419 Haloacid dehalogenase-like hydrolase NYE86_08235 PF18019 HD domain NYE86_08235 PF18395 Cas3 C-terminal domain NYE86_08250 PF09344 CT1975-like protein NYE86_08255 PF09704 CRISPR-associated protein (Cas_Cas5) NYE86_08265 PF01867 CRISPR associated protein Cas1 NYE86_08270 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) NYE86_08290 PF01022 Bacterial regulatory protein, arsR family NYE86_08305 PF03466 LysR substrate binding domain NYE86_08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_08310 PF00892 EamA-like transporter family NYE86_08320 PF00356 Bacterial regulatory proteins, lacI family NYE86_08345 PF00553 Cellulose binding domain NYE86_08345 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_08345 PF00041 Fibronectin type III domain NYE86_08360 PF01047 MarR family NYE86_08370 PF01872 RibD C-terminal domain NYE86_08370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYE86_08385 PF08241 Methyltransferase domain NYE86_08390 PF17678 Glycosyl hydrolase family 92 N-terminal domain NYE86_08390 PF07971 Glycosyl hydrolase family 92 NYE86_08395 PF13581 Histidine kinase-like ATPase domain NYE86_08395 PF07568 Histidine kinase NYE86_08395 PF13426 PAS domain NYE86_08400 PF00480 ROK family NYE86_08405 PF03600 Citrate transporter NYE86_08430 PF00067 Cytochrome P450 NYE86_08435 PF01329 Pterin 4 alpha carbinolamine dehydratase NYE86_08440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_08440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_08445 PF07690 Major Facilitator Superfamily NYE86_08455 PF00144 Beta-lactamase NYE86_08465 PF01522 Polysaccharide deacetylase NYE86_08480 PF13579 Glycosyl transferase 4-like domain NYE86_08480 PF00534 Glycosyl transferases group 1 NYE86_08500 PF00534 Glycosyl transferases group 1 NYE86_08500 PF13439 Glycosyltransferase Family 4 NYE86_08515 PF00686 Starch binding domain NYE86_08515 PF02903 Alpha amylase, N-terminal ig-like domain NYE86_08515 PF00128 Alpha amylase, catalytic domain NYE86_08520 PF16363 GDP-mannose 4,6 dehydratase NYE86_08525 PF01370 NAD dependent epimerase/dehydratase family NYE86_08530 PF02397 Bacterial sugar transferase NYE86_08540 PF00665 Integrase core domain NYE86_08545 PF01544 CorA-like Mg2+ transporter protein NYE86_08560 PF00557 Metallopeptidase family M24 NYE86_08585 PF00107 Zinc-binding dehydrogenase NYE86_08585 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_08600 PF00196 Bacterial regulatory proteins, luxR family NYE86_08605 PF01061 ABC-2 type transporter NYE86_08610 PF00005 ABC transporter NYE86_08610 PF13732 Domain of unknown function (DUF4162) NYE86_08620 PF04545 Sigma-70, region 4 NYE86_08620 PF04542 Sigma-70 region 2 NYE86_08625 PF02548 Ketopantoate hydroxymethyltransferase NYE86_08630 PF17755 UvrA DNA-binding domain NYE86_08630 PF17760 UvrA interaction domain NYE86_08630 PF00005 ABC transporter NYE86_08635 PF07690 Major Facilitator Superfamily NYE86_08640 PF00440 Bacterial regulatory proteins, tetR family NYE86_08640 PF16859 Tetracyclin repressor-like, C-terminal domain NYE86_08650 PF00795 Carbon-nitrogen hydrolase NYE86_08650 PF02540 NAD synthase NYE86_08655 PF00128 Alpha amylase, catalytic domain NYE86_08660 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_08665 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_08670 PF13416 Bacterial extracellular solute-binding protein NYE86_08675 PF00356 Bacterial regulatory proteins, lacI family NYE86_08710 PF00005 ABC transporter NYE86_08720 PF02405 Permease MlaE NYE86_08775 PF03951 Glutamine synthetase, beta-Grasp domain NYE86_08775 PF00120 Glutamine synthetase, catalytic domain NYE86_08810 PF04185 Phosphoesterase family NYE86_08815 PF00512 His Kinase A (phospho-acceptor) domain NYE86_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_08815 PF00672 HAMP domain NYE86_08820 PF00486 Transcriptional regulatory protein, C terminal NYE86_08820 PF00072 Response regulator receiver domain NYE86_08830 PF03710 Glutamate-ammonia ligase adenylyltransferase NYE86_08830 PF08335 GlnD PII-uridylyltransferase NYE86_08840 PF00356 Bacterial regulatory proteins, lacI family NYE86_08845 PF00128 Alpha amylase, catalytic domain NYE86_08850 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_08855 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_08860 PF01547 Bacterial extracellular solute-binding protein NYE86_08865 PF02806 Alpha amylase, C-terminal all-beta domain NYE86_08865 PF00128 Alpha amylase, catalytic domain NYE86_08865 PF03714 Bacterial pullanase-associated domain NYE86_08875 PF00120 Glutamine synthetase, catalytic domain NYE86_08875 PF03951 Glutamine synthetase, beta-Grasp domain NYE86_08885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_08885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_08900 PF00698 Acyl transferase domain NYE86_08900 PF00107 Zinc-binding dehydrogenase NYE86_08900 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_08900 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_08900 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_08900 PF08659 KR domain NYE86_08900 PF00550 Phosphopantetheine attachment site NYE86_08900 PF14765 Polyketide synthase dehydratase NYE86_08900 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_08915 PF10138 vWA found in TerF C terminus NYE86_08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_08920 PF03459 TOBE domain NYE86_08925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NYE86_08925 PF06827 Zinc finger found in FPG and IleRS NYE86_08955 PF00120 Glutamine synthetase, catalytic domain NYE86_08955 PF03951 Glutamine synthetase, beta-Grasp domain NYE86_08975 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NYE86_08975 PF04055 Radical SAM superfamily NYE86_08990 PF01593 Flavin containing amine oxidoreductase NYE86_08995 PF08338 Domain of unknown function (DUF1731) NYE86_08995 PF01370 NAD dependent epimerase/dehydratase family NYE86_09005 PF00583 Acetyltransferase (GNAT) family NYE86_09010 PF00456 Transketolase, thiamine diphosphate binding domain NYE86_09010 PF17831 Pyruvate dehydrogenase E1 component middle domain NYE86_09015 PF00392 Bacterial regulatory proteins, gntR family NYE86_09015 PF07729 FCD domain NYE86_09025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_09025 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_09030 PF02789 Cytosol aminopeptidase family, N-terminal domain NYE86_09030 PF00883 Cytosol aminopeptidase family, catalytic domain NYE86_09040 PF00152 tRNA synthetases class II (D, K and N) NYE86_09040 PF01336 OB-fold nucleic acid binding domain NYE86_09040 PF16995 Transmembrane region of lysyl-tRNA synthetase NYE86_09040 PF09924 Uncharacterised conserved protein (DUF2156) NYE86_09045 PF02277 Phosphoribosyltransferase NYE86_09050 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NYE86_09060 PF13180 PDZ domain NYE86_09070 PF11241 Protein of unknown function (DUF3043) NYE86_09085 PF07730 Histidine kinase NYE86_09095 PF02445 Quinolinate synthetase A protein NYE86_09100 PF01521 Iron-sulphur cluster biosynthesis NYE86_09115 PF00294 pfkB family carbohydrate kinase NYE86_09120 PF00266 Aminotransferase class-V NYE86_09125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NYE86_09130 PF00115 Cytochrome C and Quinol oxidase polypeptide I NYE86_09135 PF12270 Cytochrome c oxidase subunit IV NYE86_09140 PF17964 Bacterial Ig domain NYE86_09140 PF03734 L,D-transpeptidase catalytic domain NYE86_09150 PF00510 Cytochrome c oxidase subunit III NYE86_09155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NYE86_09155 PF00034 Cytochrome c NYE86_09160 PF00355 Rieske [2Fe-2S] domain NYE86_09165 PF13631 Cytochrome b(N-terminal)/b6/petB NYE86_09170 PF00591 Glycosyl transferase family, a/b domain NYE86_09170 PF02885 Glycosyl transferase family, helical bundle domain NYE86_09175 PF00266 Aminotransferase class-V NYE86_09185 PF01694 Rhomboid family NYE86_09200 PF00877 NlpC/P60 family NYE86_09200 PF08239 Bacterial SH3 domain NYE86_09200 PF01476 LysM domain NYE86_09210 PF00877 NlpC/P60 family NYE86_09220 PF16491 CAAX prenyl protease N-terminal, five membrane helices NYE86_09220 PF01435 Peptidase family M48 NYE86_09230 PF00534 Glycosyl transferases group 1 NYE86_09230 PF13439 Glycosyltransferase Family 4 NYE86_09240 PF00480 ROK family NYE86_09245 PF17230 Family of unknown function (DUF5304) NYE86_09265 PF00501 AMP-binding enzyme NYE86_09275 PF12146 Serine aminopeptidase, S33 NYE86_09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_09285 PF00672 HAMP domain NYE86_09285 PF07730 Histidine kinase NYE86_09290 PF00072 Response regulator receiver domain NYE86_09290 PF00196 Bacterial regulatory proteins, luxR family NYE86_09295 PF00365 Phosphofructokinase NYE86_09300 PF00485 Phosphoribulokinase / Uridine kinase family NYE86_09305 PF00425 chorismate binding enzyme NYE86_09305 PF00117 Glutamine amidotransferase class-I NYE86_09315 PF01474 Class-II DAHP synthetase family NYE86_09325 PF00210 Ferritin-like domain NYE86_09330 PF00174 Oxidoreductase molybdopterin binding domain NYE86_09340 PF05690 Thiazole biosynthesis protein ThiG NYE86_09350 PF05690 Thiazole biosynthesis protein ThiG NYE86_09350 PF01266 FAD dependent oxidoreductase NYE86_09355 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_09355 PF14759 Reductase C-terminal NYE86_09365 PF02581 Thiamine monophosphate synthase NYE86_09370 PF02219 Methylenetetrahydrofolate reductase NYE86_09385 PF01593 Flavin containing amine oxidoreductase NYE86_09395 PF08361 MAATS-type transcriptional repressor, C-terminal region NYE86_09395 PF00440 Bacterial regulatory proteins, tetR family NYE86_09405 PF08241 Methyltransferase domain NYE86_09425 PF17863 AAA lid domain NYE86_09425 PF07726 ATPase family associated with various cellular activities (AAA) NYE86_09430 PF00484 Carbonic anhydrase NYE86_09435 PF02381 MraZ protein, putative antitoxin-like NYE86_09440 PF01795 MraW methylase family NYE86_09450 PF00905 Penicillin binding protein transpeptidase domain NYE86_09450 PF03717 Penicillin-binding Protein dimerisation domain NYE86_09455 PF02875 Mur ligase family, glutamate ligase domain NYE86_09455 PF08245 Mur ligase middle domain NYE86_09455 PF01225 Mur ligase family, catalytic domain NYE86_09460 PF01225 Mur ligase family, catalytic domain NYE86_09460 PF02875 Mur ligase family, glutamate ligase domain NYE86_09460 PF08245 Mur ligase middle domain NYE86_09465 PF00953 Glycosyl transferase family 4 NYE86_09465 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NYE86_09470 PF02875 Mur ligase family, glutamate ligase domain NYE86_09470 PF08245 Mur ligase middle domain NYE86_09475 PF01098 Cell cycle protein NYE86_09480 PF04101 Glycosyltransferase family 28 C-terminal domain NYE86_09480 PF03033 Glycosyltransferase family 28 N-terminal domain NYE86_09485 PF08478 POTRA domain, FtsQ-type NYE86_09490 PF12327 FtsZ family, C-terminal domain NYE86_09490 PF00091 Tubulin/FtsZ family, GTPase domain NYE86_09495 PF02578 Multi-copper polyphenol oxidoreductase laccase NYE86_09500 PF01168 Alanine racemase, N-terminal domain NYE86_09505 PF04472 Cell division protein SepF NYE86_09515 PF05103 DivIVA protein NYE86_09520 PF00133 tRNA synthetases class I (I, L, M and V) NYE86_09520 PF08264 Anticodon-binding domain of tRNA NYE86_09525 PF01258 Prokaryotic dksA/traR C4-type zinc finger NYE86_09530 PF01252 Signal peptidase (SPase) II NYE86_09535 PF00849 RNA pseudouridylate synthase NYE86_09540 PF13673 Acetyltransferase (GNAT) domain NYE86_09545 PF00999 Sodium/hydrogen exchanger family NYE86_09565 PF07733 Bacterial DNA polymerase III alpha NTPase domain NYE86_09565 PF14579 Helix-hairpin-helix motif NYE86_09565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NYE86_09565 PF02811 PHP domain NYE86_09575 PF01936 NYN domain NYE86_09580 PF00005 ABC transporter NYE86_09580 PF13732 Domain of unknown function (DUF4162) NYE86_09595 PF04073 Aminoacyl-tRNA editing domain NYE86_09610 PF00815 Histidinol dehydrogenase NYE86_09615 PF00155 Aminotransferase class I and II NYE86_09620 PF00475 Imidazoleglycerol-phosphate dehydratase NYE86_09630 PF00117 Glutamine amidotransferase class-I NYE86_09635 PF00977 Histidine biosynthesis protein NYE86_09640 PF01042 Endoribonuclease L-PSP NYE86_09645 PF00977 Histidine biosynthesis protein NYE86_09675 PF01502 Phosphoribosyl-AMP cyclohydrolase NYE86_09680 PF00425 chorismate binding enzyme NYE86_09680 PF04715 Anthranilate synthase component I, N terminal region NYE86_09705 PF00218 Indole-3-glycerol phosphate synthase NYE86_09710 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_09715 PF00290 Tryptophan synthase alpha chain NYE86_09725 PF01790 Prolipoprotein diacylglyceryl transferase NYE86_09735 PF01645 Conserved region in glutamate synthase NYE86_09735 PF01493 GXGXG motif NYE86_09735 PF00310 Glutamine amidotransferases class-II NYE86_09735 PF04898 Glutamate synthase central domain NYE86_09740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NYE86_09740 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_09750 PF01433 Peptidase family M1 domain NYE86_09750 PF11838 ERAP1-like C-terminal domain NYE86_09755 PF00282 Pyridoxal-dependent decarboxylase conserved domain NYE86_09760 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NYE86_09765 PF02872 5'-nucleotidase, C-terminal domain NYE86_09765 PF00149 Calcineurin-like phosphoesterase NYE86_09770 PF00224 Pyruvate kinase, barrel domain NYE86_09770 PF02887 Pyruvate kinase, alpha/beta domain NYE86_09780 PF02653 Branched-chain amino acid transport system / permease component NYE86_09785 PF02653 Branched-chain amino acid transport system / permease component NYE86_09785 PF11862 Domain of unknown function (DUF3382) NYE86_09790 PF00005 ABC transporter NYE86_09790 PF12399 Branched-chain amino acid ATP-binding cassette transporter NYE86_09795 PF00005 ABC transporter NYE86_09800 PF03861 ANTAR domain NYE86_09800 PF00072 Response regulator receiver domain NYE86_09810 PF00384 Molybdopterin oxidoreductase NYE86_09810 PF01568 Molydopterin dinucleotide binding domain NYE86_09815 PF03061 Thioesterase superfamily NYE86_09820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NYE86_09820 PF00476 DNA polymerase family A NYE86_09820 PF01367 5'-3' exonuclease, C-terminal SAM fold NYE86_09830 PF08482 ATP-dependent helicase C-terminal NYE86_09830 PF00271 Helicase conserved C-terminal domain NYE86_09830 PF04408 Helicase associated domain (HA2) NYE86_09830 PF00270 DEAD/DEAH box helicase NYE86_09840 PF00575 S1 RNA binding domain NYE86_09850 PF01121 Dephospho-CoA kinase NYE86_09860 PF01145 SPFH domain / Band 7 family NYE86_09865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NYE86_09865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NYE86_09870 PF17757 UvrB interaction domain NYE86_09870 PF02151 UvrB/uvrC motif NYE86_09870 PF04851 Type III restriction enzyme, res subunit NYE86_09870 PF00271 Helicase conserved C-terminal domain NYE86_09870 PF12344 Ultra-violet resistance protein B NYE86_09875 PF02342 TerD domain NYE86_09880 PF02342 TerD domain NYE86_09885 PF03741 Integral membrane protein TerC family NYE86_09895 PF13280 WYL domain NYE86_09895 PF08279 HTH domain NYE86_09910 PF00753 Metallo-beta-lactamase superfamily NYE86_09920 PF00005 ABC transporter NYE86_09920 PF17755 UvrA DNA-binding domain NYE86_09920 PF17760 UvrA interaction domain NYE86_09930 PF01541 GIY-YIG catalytic domain NYE86_09930 PF08459 UvrC Helix-hairpin-helix N-terminal NYE86_09930 PF02151 UvrB/uvrC motif NYE86_09935 PF03668 P-loop ATPase protein family NYE86_09940 PF01933 Uncharacterised protein family UPF0052 NYE86_09945 PF10298 WhiA N-terminal LAGLIDADG-like domain NYE86_09945 PF02650 WhiA C-terminal HTH domain NYE86_09945 PF14527 WhiA LAGLIDADG-like domain NYE86_09950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NYE86_09950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NYE86_09955 PF00162 Phosphoglycerate kinase NYE86_09960 PF00121 Triosephosphate isomerase NYE86_09965 PF03840 Preprotein translocase SecG subunit NYE86_09975 PF00342 Phosphoglucose isomerase NYE86_09980 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NYE86_09990 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NYE86_09990 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NYE86_09995 PF00923 Transaldolase/Fructose-6-phosphate aldolase NYE86_10000 PF00456 Transketolase, thiamine diphosphate binding domain NYE86_10000 PF02780 Transketolase, C-terminal domain NYE86_10000 PF02779 Transketolase, pyrimidine binding domain NYE86_10005 PF01040 UbiA prenyltransferase family NYE86_10030 PF00005 ABC transporter NYE86_10040 PF01458 Uncharacterized protein family (UPF0051) NYE86_10045 PF01458 Uncharacterized protein family (UPF0051) NYE86_10055 PF00005 ABC transporter NYE86_10060 PF00266 Aminotransferase class-V NYE86_10065 PF01592 NifU-like N terminal domain NYE86_10070 PF01883 Iron-sulfur cluster assembly protein NYE86_10080 PF14602 Hexapeptide repeat of succinyl-transferase NYE86_10080 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NYE86_10125 PF01370 NAD dependent epimerase/dehydratase family NYE86_10130 PF00701 Dihydrodipicolinate synthetase family NYE86_10150 PF08241 Methyltransferase domain NYE86_10155 PF09339 IclR helix-turn-helix domain NYE86_10155 PF01614 Bacterial transcriptional regulator NYE86_10160 PF00171 Aldehyde dehydrogenase family NYE86_10180 PF07690 Major Facilitator Superfamily NYE86_10185 PF01965 DJ-1/PfpI family NYE86_10185 PF12833 Helix-turn-helix domain NYE86_10190 PF01979 Amidohydrolase family NYE86_10200 PF03793 PASTA domain NYE86_10200 PF00069 Protein kinase domain NYE86_10205 PF00155 Aminotransferase class I and II NYE86_10210 PF01903 CbiX NYE86_10215 PF02570 Precorrin-8X methylmutase NYE86_10220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_10225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_10230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_10235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_10240 PF07685 CobB/CobQ-like glutamine amidotransferase domain NYE86_10240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NYE86_10250 PF07728 AAA domain (dynein-related subfamily) NYE86_10250 PF17863 AAA lid domain NYE86_10250 PF13519 von Willebrand factor type A domain NYE86_10255 PF02514 CobN/Magnesium Chelatase NYE86_10260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NYE86_10260 PF07685 CobB/CobQ-like glutamine amidotransferase domain NYE86_10275 PF01384 Phosphate transporter family NYE86_10280 PF00355 Rieske [2Fe-2S] domain NYE86_10280 PF01266 FAD dependent oxidoreductase NYE86_10285 PF00596 Class II Aldolase and Adducin N-terminal domain NYE86_10300 PF12848 ABC transporter NYE86_10300 PF00005 ABC transporter NYE86_10300 PF16326 ABC transporter C-terminal domain NYE86_10310 PF00378 Enoyl-CoA hydratase/isomerase NYE86_10320 PF03780 Asp23 family, cell envelope-related function NYE86_10365 PF00723 Glycosyl hydrolases family 15 NYE86_10380 PF00929 Exonuclease NYE86_10385 PF04116 Fatty acid hydroxylase superfamily NYE86_10395 PF06463 Molybdenum Cofactor Synthesis C NYE86_10395 PF04055 Radical SAM superfamily NYE86_10410 PF04226 Transglycosylase associated protein NYE86_10415 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family NYE86_10435 PF00111 2Fe-2S iron-sulfur cluster binding domain NYE86_10435 PF00175 Oxidoreductase NAD-binding domain NYE86_10435 PF00970 Oxidoreductase FAD-binding domain NYE86_10445 PF18416 N-acetylglucosamine binding protein domain 2 NYE86_10445 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NYE86_10460 PF07729 FCD domain NYE86_10460 PF00392 Bacterial regulatory proteins, gntR family NYE86_10465 PF07690 Major Facilitator Superfamily NYE86_10490 PF00498 FHA domain NYE86_10490 PF01061 ABC-2 type transporter NYE86_10490 PF00005 ABC transporter NYE86_10500 PF02547 Queuosine biosynthesis protein NYE86_10505 PF00106 short chain dehydrogenase NYE86_10510 PF00672 HAMP domain NYE86_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_10510 PF07730 Histidine kinase NYE86_10515 PF00072 Response regulator receiver domain NYE86_10515 PF00196 Bacterial regulatory proteins, luxR family NYE86_10525 PF00005 ABC transporter NYE86_10535 PF01145 SPFH domain / Band 7 family NYE86_10550 PF01161 Phosphatidylethanolamine-binding protein NYE86_10565 PF00579 tRNA synthetases class I (W and Y) NYE86_10600 PF13344 Haloacid dehalogenase-like hydrolase NYE86_10600 PF18407 GCN5-related N-acetyltransferase like domain NYE86_10620 PF01728 FtsJ-like methyltransferase NYE86_10620 PF01479 S4 domain NYE86_10625 PF01513 ATP-NAD kinase NYE86_10630 PF02463 RecF/RecN/SMC N terminal domain NYE86_10645 PF00723 Glycosyl hydrolases family 15 NYE86_10650 PF00117 Glutamine amidotransferase class-I NYE86_10650 PF06418 CTP synthase N-terminus NYE86_10655 PF00293 NUDIX domain NYE86_10675 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NYE86_10675 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NYE86_10680 PF13614 AAA domain NYE86_10690 PF02616 Segregation and condensation protein ScpA NYE86_10695 PF04079 Segregation and condensation complex subunit ScpB NYE86_10710 PF02153 Prephenate dehydrogenase NYE86_10715 PF02224 Cytidylate kinase NYE86_10725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NYE86_10725 PF01926 50S ribosome-binding GTPase NYE86_10740 PF03990 G5-linked-Ubiquitin-like domain NYE86_10740 PF07501 G5 domain NYE86_10740 PF06737 Transglycosylase-like domain NYE86_10745 PF11380 Stealth protein CR2, conserved region 2 NYE86_10745 PF17103 Stealth protein CR4, conserved region 4 NYE86_10745 PF00534 Glycosyl transferases group 1 NYE86_10745 PF17101 Stealth protein CR1, conserved region 1 NYE86_10745 PF17102 Stealth protein CR3, conserved region 3 NYE86_10755 PF01569 PAP2 superfamily NYE86_10760 PF07690 Major Facilitator Superfamily NYE86_10765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_10765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_10765 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_10770 PF03176 MMPL family NYE86_10775 PF04472 Cell division protein SepF NYE86_10790 PF00089 Trypsin NYE86_10790 PF02983 Alpha-lytic protease prodomain NYE86_10800 PF01243 Pyridoxamine 5'-phosphate oxidase NYE86_10830 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_10830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_10845 PF01047 MarR family NYE86_10850 PF00392 Bacterial regulatory proteins, gntR family NYE86_10870 PF00392 Bacterial regulatory proteins, gntR family NYE86_10870 PF07702 UTRA domain NYE86_10875 PF04209 homogentisate 1,2-dioxygenase NYE86_10885 PF07690 Major Facilitator Superfamily NYE86_10890 PF00440 Bacterial regulatory proteins, tetR family NYE86_10895 PF00440 Bacterial regulatory proteins, tetR family NYE86_10895 PF17925 Tetracyclin repressor-like, C-terminal domain NYE86_10900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NYE86_10900 PF01568 Molydopterin dinucleotide binding domain NYE86_10900 PF00384 Molybdopterin oxidoreductase NYE86_10900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYE86_10900 PF00037 4Fe-4S binding domain NYE86_10905 PF00171 Aldehyde dehydrogenase family NYE86_10910 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_10910 PF00107 Zinc-binding dehydrogenase NYE86_10920 PF00440 Bacterial regulatory proteins, tetR family NYE86_10925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_10925 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_10925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_10935 PF01575 MaoC like domain NYE86_10940 PF00296 Luciferase-like monooxygenase NYE86_10950 PF13847 Methyltransferase domain NYE86_10970 PF13193 AMP-binding enzyme C-terminal domain NYE86_10970 PF00501 AMP-binding enzyme NYE86_10975 PF13977 BetI-type transcriptional repressor, C-terminal NYE86_10975 PF00440 Bacterial regulatory proteins, tetR family NYE86_10980 PF00107 Zinc-binding dehydrogenase NYE86_10980 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_10985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_10985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_10985 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_10990 PF01636 Phosphotransferase enzyme family NYE86_10995 PF13378 Enolase C-terminal domain-like NYE86_10995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_11000 PF02447 GntP family permease NYE86_11010 PF07729 FCD domain NYE86_11010 PF00392 Bacterial regulatory proteins, gntR family NYE86_11015 PF02656 Domain of unknown function (DUF202) NYE86_11020 PF02656 Domain of unknown function (DUF202) NYE86_11040 PF00293 NUDIX domain NYE86_11050 PF05726 Pirin C-terminal cupin domain NYE86_11050 PF02678 Pirin NYE86_11060 PF00132 Bacterial transferase hexapeptide (six repeats) NYE86_11060 PF00483 Nucleotidyl transferase NYE86_11070 PF00128 Alpha amylase, catalytic domain NYE86_11070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYE86_11080 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NYE86_11080 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NYE86_11085 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_11100 PF07690 Major Facilitator Superfamily NYE86_11125 PF05199 GMC oxidoreductase NYE86_11125 PF00732 GMC oxidoreductase NYE86_11135 PF00248 Aldo/keto reductase family NYE86_11155 PF07690 Major Facilitator Superfamily NYE86_11180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYE86_11180 PF00205 Thiamine pyrophosphate enzyme, central domain NYE86_11180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYE86_11190 PF11896 Domain of unknown function (DUF3416) NYE86_11195 PF18085 Maltokinase N-terminal cap domain NYE86_11195 PF01636 Phosphotransferase enzyme family NYE86_11200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYE86_11200 PF02806 Alpha amylase, C-terminal all-beta domain NYE86_11200 PF00128 Alpha amylase, catalytic domain NYE86_11210 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_11215 PF00005 ABC transporter NYE86_11215 PF00571 CBS domain NYE86_11225 PF00211 Adenylate and Guanylate cyclase catalytic domain NYE86_11225 PF13191 AAA ATPase domain NYE86_11260 PF00106 short chain dehydrogenase NYE86_11265 PF07731 Multicopper oxidase NYE86_11265 PF07732 Multicopper oxidase NYE86_11265 PF00394 Multicopper oxidase NYE86_11280 PF01546 Peptidase family M20/M25/M40 NYE86_11280 PF07687 Peptidase dimerisation domain NYE86_11285 PF03777 ChpA-C NYE86_11315 PF00248 Aldo/keto reductase family NYE86_11320 PF00296 Luciferase-like monooxygenase NYE86_11330 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_11345 PF01406 tRNA synthetases class I (C) catalytic domain NYE86_11370 PF13378 Enolase C-terminal domain-like NYE86_11370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_11380 PF13407 Periplasmic binding protein domain NYE86_11385 PF00005 ABC transporter NYE86_11390 PF02653 Branched-chain amino acid transport system / permease component NYE86_11395 PF00248 Aldo/keto reductase family NYE86_11405 PF07729 FCD domain NYE86_11405 PF00392 Bacterial regulatory proteins, gntR family NYE86_11425 PF01266 FAD dependent oxidoreductase NYE86_11425 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NYE86_11430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYE86_11430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYE86_11435 PF00230 Major intrinsic protein NYE86_11440 PF01614 Bacterial transcriptional regulator NYE86_11440 PF09339 IclR helix-turn-helix domain NYE86_11445 PF02574 Homocysteine S-methyltransferase NYE86_11445 PF00809 Pterin binding enzyme NYE86_11445 PF02965 Vitamin B12 dependent methionine synthase, activation domain NYE86_11445 PF02607 B12 binding domain NYE86_11445 PF02310 B12 binding domain NYE86_11450 PF13419 Haloacid dehalogenase-like hydrolase NYE86_11460 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_11465 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_11465 PF12911 N-terminal TM domain of oligopeptide transport permease C NYE86_11470 PF00005 ABC transporter NYE86_11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_11475 PF00005 ABC transporter NYE86_11475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_11480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYE86_11485 PF00196 Bacterial regulatory proteins, luxR family NYE86_11485 PF00072 Response regulator receiver domain NYE86_11495 PF02163 Peptidase family M50 NYE86_11495 PF00571 CBS domain NYE86_11500 PF08704 tRNA methyltransferase complex GCD14 subunit NYE86_11515 PF17758 Proteasomal ATPase OB N-terminal domain NYE86_11515 PF16450 Proteasomal ATPase OB C-terminal domain NYE86_11515 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_11520 PF03136 Pup-ligase protein NYE86_11525 PF05639 Pup-like protein NYE86_11530 PF00227 Proteasome subunit NYE86_11535 PF00227 Proteasome subunit NYE86_11540 PF00356 Bacterial regulatory proteins, lacI family NYE86_11550 PF03136 Pup-ligase protein NYE86_11555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NYE86_11555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NYE86_11560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NYE86_11565 PF13280 WYL domain NYE86_11570 PF13280 WYL domain NYE86_11585 PF02416 mttA/Hcf106 family NYE86_11590 PF00902 Sec-independent protein translocase protein (TatC) NYE86_11595 PF00781 Diacylglycerol kinase catalytic domain NYE86_11600 PF00270 DEAD/DEAH box helicase NYE86_11600 PF08148 DSHCT (NUC185) domain NYE86_11600 PF00271 Helicase conserved C-terminal domain NYE86_11610 PF01425 Amidase NYE86_11615 PF02785 Biotin carboxylase C-terminal domain NYE86_11615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYE86_11615 PF00364 Biotin-requiring enzyme NYE86_11615 PF00289 Biotin carboxylase, N-terminal domain NYE86_11665 PF13732 Domain of unknown function (DUF4162) NYE86_11665 PF00005 ABC transporter NYE86_11680 PF04954 Siderophore-interacting protein NYE86_11680 PF08021 Siderophore-interacting FAD-binding domain NYE86_11685 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_11685 PF00553 Cellulose binding domain NYE86_11705 PF00392 Bacterial regulatory proteins, gntR family NYE86_11705 PF07702 UTRA domain NYE86_11710 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain NYE86_11710 PF01522 Polysaccharide deacetylase NYE86_11715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NYE86_11715 PF01367 5'-3' exonuclease, C-terminal SAM fold NYE86_11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_11730 PF03466 LysR substrate binding domain NYE86_11750 PF00082 Subtilase family NYE86_11760 PF00230 Major intrinsic protein NYE86_11770 PF00707 Translation initiation factor IF-3, C-terminal domain NYE86_11770 PF05198 Translation initiation factor IF-3, N-terminal domain NYE86_11775 PF01632 Ribosomal protein L35 NYE86_11780 PF00453 Ribosomal protein L20 NYE86_11785 PF08032 RNA 2'-O ribose methyltransferase substrate binding NYE86_11785 PF00588 SpoU rRNA Methylase family NYE86_11790 PF00989 PAS fold NYE86_11790 PF00512 His Kinase A (phospho-acceptor) domain NYE86_11790 PF18698 Histidine kinase sensor domain NYE86_11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_11790 PF00672 HAMP domain NYE86_11795 PF01409 tRNA synthetases class II core domain (F) NYE86_11795 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NYE86_11800 PF03483 B3/4 domain NYE86_11800 PF03484 tRNA synthetase B5 domain NYE86_11800 PF03147 Ferredoxin-fold anticodon binding domain NYE86_11800 PF01588 Putative tRNA binding domain NYE86_11800 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NYE86_11825 PF00005 ABC transporter NYE86_11830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYE86_11830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYE86_11835 PF03442 Carbohydrate binding domain X2 NYE86_11835 PF00942 Cellulose binding domain NYE86_11840 PF02638 Glycosyl hydrolase-like 10 NYE86_11860 PF03704 Bacterial transcriptional activator domain NYE86_11860 PF00931 NB-ARC domain NYE86_11860 PF00486 Transcriptional regulatory protein, C terminal NYE86_11885 PF05175 Methyltransferase small domain NYE86_11910 PF02774 Semialdehyde dehydrogenase, dimerisation domain NYE86_11910 PF01118 Semialdehyde dehydrogenase, NAD binding domain NYE86_11915 PF01960 ArgJ family NYE86_11920 PF00696 Amino acid kinase family NYE86_11925 PF00202 Aminotransferase class-III NYE86_11930 PF01316 Arginine repressor, DNA binding domain NYE86_11930 PF02863 Arginine repressor, C-terminal domain NYE86_11935 PF00764 Arginosuccinate synthase NYE86_11940 PF14698 Argininosuccinate lyase C-terminal NYE86_11940 PF00206 Lyase NYE86_11945 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYE86_11950 PF01553 Acyltransferase NYE86_11950 PF00501 AMP-binding enzyme NYE86_11980 PF09383 NIL domain NYE86_11980 PF00005 ABC transporter NYE86_11985 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_11990 PF03180 NLPA lipoprotein NYE86_11995 PF08241 Methyltransferase domain NYE86_12005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_12010 PF02277 Phosphoribosyltransferase NYE86_12015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_12015 PF14824 Sirohaem biosynthesis protein central NYE86_12015 PF10414 Sirohaem synthase dimerisation region NYE86_12020 PF00588 SpoU rRNA Methylase family NYE86_12040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_12040 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_12040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_12045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_12045 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_12045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_12055 PF01063 Amino-transferase class IV NYE86_12060 PF04715 Anthranilate synthase component I, N terminal region NYE86_12060 PF00425 chorismate binding enzyme NYE86_12115 PF00069 Protein kinase domain NYE86_12115 PF00400 WD domain, G-beta repeat NYE86_12140 PF04686 Streptomyces sporulation and cell division protein, SsgA NYE86_12165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYE86_12165 PF03129 Anticodon binding domain NYE86_12165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NYE86_12170 PF07885 Ion channel NYE86_12175 PF01230 HIT domain NYE86_12185 PF14492 Elongation Factor G, domain II NYE86_12185 PF03764 Elongation factor G, domain IV NYE86_12185 PF00679 Elongation factor G C-terminus NYE86_12185 PF03144 Elongation factor Tu domain 2 NYE86_12185 PF00009 Elongation factor Tu GTP binding domain NYE86_12190 PF01066 CDP-alcohol phosphatidyltransferase NYE86_12195 PF03279 Bacterial lipid A biosynthesis acyltransferase NYE86_12200 PF13439 Glycosyltransferase Family 4 NYE86_12210 PF01680 SOR/SNZ family NYE86_12215 PF01174 SNO glutamine amidotransferase family NYE86_12220 PF01709 Transcriptional regulator NYE86_12225 PF02075 Crossover junction endodeoxyribonuclease RuvC NYE86_12230 PF07499 RuvA, C-terminal domain NYE86_12230 PF01330 RuvA N terminal domain NYE86_12235 PF05491 RuvB C-terminal winged helix domain NYE86_12235 PF05496 Holliday junction DNA helicase RuvB P-loop domain NYE86_12235 PF17864 RuvB AAA lid domain NYE86_12245 PF02355 Protein export membrane protein NYE86_12245 PF07549 SecD/SecF GG Motif NYE86_12250 PF02355 Protein export membrane protein NYE86_12250 PF07549 SecD/SecF GG Motif NYE86_12255 PF00156 Phosphoribosyl transferase domain NYE86_12260 PF13291 ACT domain NYE86_12260 PF04607 Region found in RelA / SpoT proteins NYE86_12260 PF02824 TGS domain NYE86_12265 PF03993 Domain of Unknown Function (DUF349) NYE86_12270 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NYE86_12275 PF00753 Metallo-beta-lactamase superfamily NYE86_12280 PF13393 Histidyl-tRNA synthetase NYE86_12280 PF03129 Anticodon binding domain NYE86_12290 PF12002 MgsA AAA+ ATPase C terminal NYE86_12290 PF16193 AAA C-terminal domain NYE86_12290 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_12295 PF01479 S4 domain NYE86_12295 PF00163 Ribosomal protein S4/S9 N-terminal domain NYE86_12300 PF00196 Bacterial regulatory proteins, luxR family NYE86_12315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NYE86_12315 PF02272 DHHA1 domain NYE86_12315 PF01411 tRNA synthetases class II (A) NYE86_12320 PF03652 Holliday junction resolvase NYE86_12330 PF01488 Shikimate / quinate 5-dehydrogenase NYE86_12330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NYE86_12330 PF08501 Shikimate dehydrogenase substrate binding domain NYE86_12340 PF01264 Chorismate synthase NYE86_12345 PF01202 Shikimate kinase NYE86_12350 PF01761 3-dehydroquinate synthase NYE86_12355 PF01220 Dehydroquinase class II NYE86_12365 PF01321 Creatinase/Prolidase N-terminal domain NYE86_12365 PF00557 Metallopeptidase family M24 NYE86_12370 PF01132 Elongation factor P (EF-P) OB domain NYE86_12370 PF08207 Elongation factor P (EF-P) KOW-like domain NYE86_12370 PF09285 Elongation factor P, C-terminal NYE86_12375 PF01029 NusB family NYE86_12380 PF00282 Pyridoxal-dependent decarboxylase conserved domain NYE86_12385 PF03144 Elongation factor Tu domain 2 NYE86_12385 PF03764 Elongation factor G, domain IV NYE86_12385 PF00679 Elongation factor G C-terminus NYE86_12385 PF14492 Elongation Factor G, domain II NYE86_12385 PF00009 Elongation factor Tu GTP binding domain NYE86_12395 PF00156 Phosphoribosyl transferase domain NYE86_12400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NYE86_12400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NYE86_12405 PF01979 Amidohydrolase family NYE86_12415 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NYE86_12415 PF00117 Glutamine amidotransferase class-I NYE86_12420 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NYE86_12420 PF02142 MGS-like domain NYE86_12420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYE86_12425 PF01180 Dihydroorotate dehydrogenase NYE86_12430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NYE86_12440 PF00625 Guanylate kinase NYE86_12445 PF01192 RNA polymerase Rpb6 NYE86_12450 PF04127 DNA / pantothenate metabolism flavoprotein NYE86_12450 PF02441 Flavoprotein NYE86_12455 PF02772 S-adenosylmethionine synthetase, central domain NYE86_12455 PF00438 S-adenosylmethionine synthetase, N-terminal domain NYE86_12455 PF02773 S-adenosylmethionine synthetase, C-terminal domain NYE86_12470 PF01327 Polypeptide deformylase NYE86_12475 PF02911 Formyl transferase, C-terminal domain NYE86_12475 PF00551 Formyl transferase NYE86_12485 PF03176 MMPL family NYE86_12490 PF00834 Ribulose-phosphate 3 epimerase family NYE86_12495 PF04198 Putative sugar-binding domain NYE86_12505 PF00571 CBS domain NYE86_12505 PF00478 IMP dehydrogenase / GMP reductase domain NYE86_12520 PF00795 Carbon-nitrogen hydrolase NYE86_12525 PF01593 Flavin containing amine oxidoreductase NYE86_12540 PF00860 Permease family NYE86_12545 PF07690 Major Facilitator Superfamily NYE86_12550 PF00480 ROK family NYE86_12555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYE86_12555 PF01872 RibD C-terminal domain NYE86_12560 PF00677 Lumazine binding domain NYE86_12565 PF04973 Nicotinamide mononucleotide transporter NYE86_12570 PF00925 GTP cyclohydrolase II NYE86_12570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NYE86_12575 PF00885 6,7-dimethyl-8-ribityllumazine synthase NYE86_12580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NYE86_12585 PF01634 ATP phosphoribosyltransferase NYE86_12585 PF08029 HisG, C-terminal domain NYE86_12595 PF00571 CBS domain NYE86_12595 PF03471 Transporter associated domain NYE86_12595 PF01595 Cyclin M transmembrane N-terminal domain NYE86_12600 PF00571 CBS domain NYE86_12600 PF01595 Cyclin M transmembrane N-terminal domain NYE86_12605 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_12605 PF17866 AAA lid domain NYE86_12610 PF02569 Pantoate-beta-alanine ligase NYE86_12610 PF02224 Cytidylate kinase NYE86_12615 PF01321 Creatinase/Prolidase N-terminal domain NYE86_12615 PF00557 Metallopeptidase family M24 NYE86_12635 PF13188 PAS domain NYE86_12635 PF03707 Bacterial signalling protein N terminal repeat NYE86_12635 PF00990 Diguanylate cyclase, GGDEF domain NYE86_12635 PF00563 EAL domain NYE86_12645 PF13570 PQQ-like domain NYE86_12645 PF00069 Protein kinase domain NYE86_12645 PF13360 PQQ-like domain NYE86_12645 PF01011 PQQ enzyme repeat NYE86_12650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_12650 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_12650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_12660 PF04030 D-arabinono-1,4-lactone oxidase NYE86_12660 PF01565 FAD binding domain NYE86_12665 PF01037 Lrp/AsnC ligand binding domain NYE86_12675 PF00795 Carbon-nitrogen hydrolase NYE86_12675 PF00535 Glycosyl transferase family 2 NYE86_12680 PF00535 Glycosyl transferase family 2 NYE86_12695 PF13397 RNA polymerase-binding protein NYE86_12705 PF00392 Bacterial regulatory proteins, gntR family NYE86_12705 PF00155 Aminotransferase class I and II NYE86_12730 PF01551 Peptidase family M23 NYE86_12730 PF01476 LysM domain NYE86_12755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NYE86_12755 PF07497 Rho termination factor, RNA-binding domain NYE86_12760 PF07943 Penicillin-binding protein 5, C-terminal domain NYE86_12760 PF00768 D-alanyl-D-alanine carboxypeptidase NYE86_12765 PF00296 Luciferase-like monooxygenase NYE86_12770 PF06737 Transglycosylase-like domain NYE86_12775 PF00665 Integrase core domain NYE86_12785 PF00248 Aldo/keto reductase family NYE86_12800 PF00005 ABC transporter NYE86_12815 PF02839 Carbohydrate binding domain NYE86_12820 PF02673 Bacitracin resistance protein BacA NYE86_12830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_12830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_12840 PF01261 Xylose isomerase-like TIM barrel NYE86_12845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_12845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_12850 PF00480 ROK family NYE86_12860 PF12833 Helix-turn-helix domain NYE86_12860 PF02805 Metal binding domain of Ada NYE86_12860 PF00730 HhH-GPD superfamily base excision DNA repair protein NYE86_12860 PF06029 AlkA N-terminal domain NYE86_12865 PF01263 Aldose 1-epimerase NYE86_12870 PF00356 Bacterial regulatory proteins, lacI family NYE86_12875 PF02653 Branched-chain amino acid transport system / permease component NYE86_12880 PF02653 Branched-chain amino acid transport system / permease component NYE86_12885 PF00005 ABC transporter NYE86_12890 PF13407 Periplasmic binding protein domain NYE86_12920 PF00483 Nucleotidyl transferase NYE86_12925 PF16363 GDP-mannose 4,6 dehydratase NYE86_12940 PF13439 Glycosyltransferase Family 4 NYE86_12940 PF00534 Glycosyl transferases group 1 NYE86_12960 PF13581 Histidine kinase-like ATPase domain NYE86_12960 PF08448 PAS fold NYE86_12960 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_12960 PF13466 STAS domain NYE86_12965 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYE86_12965 PF04389 Peptidase family M28 NYE86_12965 PF01447 Thermolysin metallopeptidase, catalytic domain NYE86_12970 PF00171 Aldehyde dehydrogenase family NYE86_12975 PF14310 Fibronectin type III-like domain NYE86_12975 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_12975 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_12990 PF00041 Fibronectin type III domain NYE86_12990 PF00704 Glycosyl hydrolases family 18 NYE86_12995 PF02839 Carbohydrate binding domain NYE86_13005 PF07690 Major Facilitator Superfamily NYE86_13015 PF07690 Major Facilitator Superfamily NYE86_13020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NYE86_13020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NYE86_13020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NYE86_13020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NYE86_13025 PF00664 ABC transporter transmembrane region NYE86_13025 PF00005 ABC transporter NYE86_13030 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_13030 PF00107 Zinc-binding dehydrogenase NYE86_13035 PF03777 ChpA-C NYE86_13050 PF05977 Transmembrane secretion effector NYE86_13065 PF04679 ATP dependent DNA ligase C terminal region NYE86_13065 PF01068 ATP dependent DNA ligase domain NYE86_13090 PF08241 Methyltransferase domain NYE86_13105 PF04185 Phosphoesterase family NYE86_13105 PF05506 Domain of unknown function (DUF756) NYE86_13110 PF04261 Dyp-type peroxidase family NYE86_13130 PF00553 Cellulose binding domain NYE86_13130 PF00041 Fibronectin type III domain NYE86_13130 PF01341 Glycosyl hydrolases family 6 NYE86_13145 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_13150 PF04542 Sigma-70 region 2 NYE86_13150 PF08281 Sigma-70, region 4 NYE86_13155 PF03795 YCII-related domain NYE86_13160 PF06912 Protein of unknown function (DUF1275) NYE86_13165 PF00083 Sugar (and other) transporter NYE86_13170 PF00356 Bacterial regulatory proteins, lacI family NYE86_13180 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_13185 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_13190 PF01055 Glycosyl hydrolases family 31 NYE86_13200 PF04545 Sigma-70, region 4 NYE86_13200 PF04539 Sigma-70 region 3 NYE86_13200 PF04542 Sigma-70 region 2 NYE86_13205 PF05448 Acetyl xylan esterase (AXE1) NYE86_13215 PF13439 Glycosyltransferase Family 4 NYE86_13215 PF00534 Glycosyl transferases group 1 NYE86_13220 PF00483 Nucleotidyl transferase NYE86_13225 PF07971 Glycosyl hydrolase family 92 NYE86_13225 PF17678 Glycosyl hydrolase family 92 N-terminal domain NYE86_13230 PF00005 ABC transporter NYE86_13235 PF02653 Branched-chain amino acid transport system / permease component NYE86_13245 PF00356 Bacterial regulatory proteins, lacI family NYE86_13250 PF00248 Aldo/keto reductase family NYE86_13255 PF00356 Bacterial regulatory proteins, lacI family NYE86_13265 PF01810 LysE type translocator NYE86_13270 PF03466 LysR substrate binding domain NYE86_13270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_13285 PF00444 Ribosomal protein L36 NYE86_13290 PF00440 Bacterial regulatory proteins, tetR family NYE86_13290 PF16295 Tetracyclin repressor-like, C-terminal domain NYE86_13295 PF07690 Major Facilitator Superfamily NYE86_13300 PF01255 Putative undecaprenyl diphosphate synthase NYE86_13310 PF10503 Esterase PHB depolymerase NYE86_13325 PF01494 FAD binding domain NYE86_13350 PF02797 Chalcone and stilbene synthases, C-terminal domain NYE86_13350 PF00195 Chalcone and stilbene synthases, N-terminal domain NYE86_13355 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NYE86_13360 PF01494 FAD binding domain NYE86_13365 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NYE86_13365 PF04616 Glycosyl hydrolases family 43 NYE86_13375 PF00356 Bacterial regulatory proteins, lacI family NYE86_13380 PF00230 Major intrinsic protein NYE86_13385 PF03971 Monomeric isocitrate dehydrogenase NYE86_13390 PF13407 Periplasmic binding protein domain NYE86_13400 PF06580 Histidine kinase NYE86_13400 PF07694 5TMR of 5TMR-LYT NYE86_13405 PF00072 Response regulator receiver domain NYE86_13405 PF04397 LytTr DNA-binding domain NYE86_13415 PF00474 Sodium:solute symporter family NYE86_13420 PF01184 GPR1/FUN34/yaaH family NYE86_13425 PF13193 AMP-binding enzyme C-terminal domain NYE86_13425 PF16177 Acetyl-coenzyme A synthetase N-terminus NYE86_13425 PF00501 AMP-binding enzyme NYE86_13430 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_13430 PF00553 Cellulose binding domain NYE86_13435 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_13440 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_13455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_13455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_13460 PF00440 Bacterial regulatory proteins, tetR family NYE86_13460 PF16859 Tetracyclin repressor-like, C-terminal domain NYE86_13465 PF07690 Major Facilitator Superfamily NYE86_13490 PF04542 Sigma-70 region 2 NYE86_13490 PF08281 Sigma-70, region 4 NYE86_13490 PF12680 SnoaL-like domain NYE86_13495 PF00149 Calcineurin-like phosphoesterase NYE86_13500 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NYE86_13500 PF01648 4'-phosphopantetheinyl transferase superfamily NYE86_13505 PF00356 Bacterial regulatory proteins, lacI family NYE86_13530 PF05762 VWA domain containing CoxE-like protein NYE86_13535 PF07728 AAA domain (dynein-related subfamily) NYE86_13555 PF00171 Aldehyde dehydrogenase family NYE86_13565 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_13570 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_13580 PF04542 Sigma-70 region 2 NYE86_13580 PF04545 Sigma-70, region 4 NYE86_13595 PF00294 pfkB family carbohydrate kinase NYE86_13625 PF00464 Serine hydroxymethyltransferase NYE86_13645 PF00356 Bacterial regulatory proteins, lacI family NYE86_13660 PF00722 Glycosyl hydrolases family 16 NYE86_13670 PF00486 Transcriptional regulatory protein, C terminal NYE86_13670 PF00072 Response regulator receiver domain NYE86_13675 PF00512 His Kinase A (phospho-acceptor) domain NYE86_13675 PF00672 HAMP domain NYE86_13675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_13690 PF01367 5'-3' exonuclease, C-terminal SAM fold NYE86_13690 PF00476 DNA polymerase family A NYE86_13690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NYE86_13695 PF00085 Thioredoxin NYE86_13700 PF00285 Citrate synthase, C-terminal domain NYE86_13705 PF00285 Citrate synthase, C-terminal domain NYE86_13710 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_13710 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_13710 PF08659 KR domain NYE86_13710 PF00550 Phosphopantetheine attachment site NYE86_13710 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_13710 PF14765 Polyketide synthase dehydratase NYE86_13710 PF09277 Erythronolide synthase, docking NYE86_13710 PF08990 Erythronolide synthase docking NYE86_13710 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_13710 PF00698 Acyl transferase domain NYE86_13715 PF01435 Peptidase family M48 NYE86_13725 PF04075 F420H(2)-dependent quinone reductase NYE86_13735 PF04542 Sigma-70 region 2 NYE86_13735 PF08281 Sigma-70, region 4 NYE86_13740 PF07690 Major Facilitator Superfamily NYE86_13770 PF01179 Copper amine oxidase, enzyme domain NYE86_13770 PF02728 Copper amine oxidase, N3 domain NYE86_13775 PF02515 CoA-transferase family III NYE86_13780 PF00108 Thiolase, N-terminal domain NYE86_13780 PF02803 Thiolase, C-terminal domain NYE86_13785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYE86_13785 PF00378 Enoyl-CoA hydratase/isomerase NYE86_13785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYE86_13790 PF11838 ERAP1-like C-terminal domain NYE86_13790 PF01433 Peptidase family M1 domain NYE86_13805 PF16921 Tex protein YqgF-like domain NYE86_13805 PF09371 Tex-like protein N-terminal domain NYE86_13805 PF00575 S1 RNA binding domain NYE86_13805 PF17674 HHH domain NYE86_13825 PF03423 Carbohydrate binding domain (family 25) NYE86_13825 PF00128 Alpha amylase, catalytic domain NYE86_13825 PF01373 Glycosyl hydrolase family 14 NYE86_13830 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_13830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_13845 PF12697 Alpha/beta hydrolase family NYE86_13850 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NYE86_13865 PF00270 DEAD/DEAH box helicase NYE86_13865 PF08148 DSHCT (NUC185) domain NYE86_13865 PF00271 Helicase conserved C-terminal domain NYE86_13875 PF00005 ABC transporter NYE86_13875 PF00664 ABC transporter transmembrane region NYE86_13880 PF00005 ABC transporter NYE86_13880 PF00664 ABC transporter transmembrane region NYE86_13885 PF00686 Starch binding domain NYE86_13885 PF02806 Alpha amylase, C-terminal all-beta domain NYE86_13885 PF00128 Alpha amylase, catalytic domain NYE86_13890 PF01741 Large-conductance mechanosensitive channel, MscL NYE86_13895 PF01047 MarR family NYE86_13900 PF00664 ABC transporter transmembrane region NYE86_13900 PF00005 ABC transporter NYE86_13905 PF02589 LUD domain NYE86_13915 PF02754 Cysteine-rich domain NYE86_13925 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_13925 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_13930 PF01894 Uncharacterised protein family UPF0047 NYE86_13935 PF04679 ATP dependent DNA ligase C terminal region NYE86_13935 PF01068 ATP dependent DNA ligase domain NYE86_13940 PF13298 DNA polymerase Ligase (LigD) NYE86_13940 PF04679 ATP dependent DNA ligase C terminal region NYE86_13940 PF01068 ATP dependent DNA ligase domain NYE86_13945 PF01301 Glycosyl hydrolases family 35 NYE86_13950 PF12833 Helix-turn-helix domain NYE86_13950 PF01965 DJ-1/PfpI family NYE86_13955 PF01965 DJ-1/PfpI family NYE86_13965 PF10282 Lactonase, 7-bladed beta-propeller NYE86_13985 PF03167 Uracil DNA glycosylase superfamily NYE86_13995 PF00005 ABC transporter NYE86_13995 PF00664 ABC transporter transmembrane region NYE86_14010 PF00931 NB-ARC domain NYE86_14010 PF03704 Bacterial transcriptional activator domain NYE86_14010 PF00486 Transcriptional regulatory protein, C terminal NYE86_14020 PF17934 Tetracyclin repressor-like, C-terminal domain NYE86_14020 PF00440 Bacterial regulatory proteins, tetR family NYE86_14045 PF03009 Glycerophosphoryl diester phosphodiesterase family NYE86_14060 PF01212 Beta-eliminating lyase NYE86_14085 PF01012 Electron transfer flavoprotein domain NYE86_14090 PF00766 Electron transfer flavoprotein FAD-binding domain NYE86_14090 PF01012 Electron transfer flavoprotein domain NYE86_14100 PF00356 Bacterial regulatory proteins, lacI family NYE86_14110 PF07690 Major Facilitator Superfamily NYE86_14115 PF01638 HxlR-like helix-turn-helix NYE86_14125 PF07687 Peptidase dimerisation domain NYE86_14125 PF01546 Peptidase family M20/M25/M40 NYE86_14140 PF13305 Tetracyclin repressor-like, C-terminal domain NYE86_14140 PF00440 Bacterial regulatory proteins, tetR family NYE86_14145 PF07730 Histidine kinase NYE86_14150 PF00196 Bacterial regulatory proteins, luxR family NYE86_14150 PF00072 Response regulator receiver domain NYE86_14155 PF07690 Major Facilitator Superfamily NYE86_14170 PF07690 Major Facilitator Superfamily NYE86_14175 PF00480 ROK family NYE86_14185 PF00005 ABC transporter NYE86_14190 PF02687 FtsX-like permease family NYE86_14190 PF00005 ABC transporter NYE86_14190 PF12704 MacB-like periplasmic core domain NYE86_14200 PF00392 Bacterial regulatory proteins, gntR family NYE86_14200 PF00155 Aminotransferase class I and II NYE86_14205 PF00561 alpha/beta hydrolase fold NYE86_14225 PF00455 DeoR C terminal sensor domain NYE86_14225 PF08220 DeoR-like helix-turn-helix domain NYE86_14235 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_14235 PF17866 AAA lid domain NYE86_14260 PF00535 Glycosyl transferase family 2 NYE86_14265 PF01177 Asp/Glu/Hydantoin racemase NYE86_14280 PF13344 Haloacid dehalogenase-like hydrolase NYE86_14280 PF00293 NUDIX domain NYE86_14290 PF03610 PTS system fructose IIA component NYE86_14300 PF02733 Dak1 domain NYE86_14315 PF00561 alpha/beta hydrolase fold NYE86_14320 PF02126 Phosphotriesterase family NYE86_14330 PF16925 Tetracyclin repressor-like, C-terminal domain NYE86_14330 PF00440 Bacterial regulatory proteins, tetR family NYE86_14340 PF00072 Response regulator receiver domain NYE86_14340 PF00486 Transcriptional regulatory protein, C terminal NYE86_14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_14345 PF00672 HAMP domain NYE86_14345 PF00512 His Kinase A (phospho-acceptor) domain NYE86_14350 PF00857 Isochorismatase family NYE86_14375 PF00211 Adenylate and Guanylate cyclase catalytic domain NYE86_14375 PF13191 AAA ATPase domain NYE86_14385 PF01636 Phosphotransferase enzyme family NYE86_14405 PF13439 Glycosyltransferase Family 4 NYE86_14405 PF00534 Glycosyl transferases group 1 NYE86_14410 PF13579 Glycosyl transferase 4-like domain NYE86_14410 PF00534 Glycosyl transferases group 1 NYE86_14420 PF02626 Carboxyltransferase domain, subdomain A and B NYE86_14425 PF02682 Carboxyltransferase domain, subdomain C and D NYE86_14430 PF03746 LamB/YcsF family NYE86_14460 PF03259 Roadblock/LC7 domain NYE86_14475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYE86_14475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYE86_14480 PF00293 NUDIX domain NYE86_14500 PF00709 Adenylosuccinate synthetase NYE86_14505 PF01427 D-ala-D-ala dipeptidase NYE86_14510 PF00293 NUDIX domain NYE86_14510 PF09297 NADH pyrophosphatase zinc ribbon domain NYE86_14515 PF16338 Domain of unknown function (DUF4968) NYE86_14515 PF17137 Domain of unknown function (DUF5110) NYE86_14515 PF13802 Galactose mutarotase-like NYE86_14515 PF01055 Glycosyl hydrolases family 31 NYE86_14520 PF13193 AMP-binding enzyme C-terminal domain NYE86_14520 PF00501 AMP-binding enzyme NYE86_14525 PF00392 Bacterial regulatory proteins, gntR family NYE86_14540 PF05524 PEP-utilising enzyme, N-terminal NYE86_14540 PF00391 PEP-utilising enzyme, mobile domain NYE86_14540 PF02896 PEP-utilising enzyme, TIM barrel domain NYE86_14545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NYE86_14565 PF01066 CDP-alcohol phosphatidyltransferase NYE86_14570 PF00483 Nucleotidyl transferase NYE86_14575 PF05949 Bacterial protein of unknown function (DUF881) NYE86_14580 PF06947 Protein of unknown function (DUF1290) NYE86_14585 PF05949 Bacterial protein of unknown function (DUF881) NYE86_14600 PF02577 Bifunctional nuclease NYE86_14605 PF13411 MerR HTH family regulatory protein NYE86_14610 PF00817 impB/mucB/samB family NYE86_14610 PF11799 impB/mucB/samB family C-terminal domain NYE86_14620 PF02347 Glycine cleavage system P-protein NYE86_14645 PF02567 Phenazine biosynthesis-like protein NYE86_14660 PF00196 Bacterial regulatory proteins, luxR family NYE86_14665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYE86_14670 PF12833 Helix-turn-helix domain NYE86_14670 PF01965 DJ-1/PfpI family NYE86_14675 PF03551 Transcriptional regulator PadR-like family NYE86_14680 PF00356 Bacterial regulatory proteins, lacI family NYE86_14685 PF14310 Fibronectin type III-like domain NYE86_14685 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_14685 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_14690 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NYE86_14690 PF01243 Pyridoxamine 5'-phosphate oxidase NYE86_14705 PF00892 EamA-like transporter family NYE86_14715 PF00392 Bacterial regulatory proteins, gntR family NYE86_14715 PF00155 Aminotransferase class I and II NYE86_14720 PF00892 EamA-like transporter family NYE86_14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_14725 PF03466 LysR substrate binding domain NYE86_14755 PF03167 Uracil DNA glycosylase superfamily NYE86_14770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_14775 PF00795 Carbon-nitrogen hydrolase NYE86_14780 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_14785 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_14785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_14785 PF00403 Heavy-metal-associated domain NYE86_14805 PF01613 Flavin reductase like domain NYE86_14810 PF09084 NMT1/THI5 like NYE86_14820 PF00005 ABC transporter NYE86_14825 PF00296 Luciferase-like monooxygenase NYE86_14830 PF00664 ABC transporter transmembrane region NYE86_14830 PF00005 ABC transporter NYE86_14835 PF00550 Phosphopantetheine attachment site NYE86_14835 PF08659 KR domain NYE86_14835 PF14765 Polyketide synthase dehydratase NYE86_14835 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_14835 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_14835 PF00107 Zinc-binding dehydrogenase NYE86_14835 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_14835 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_14835 PF00698 Acyl transferase domain NYE86_14845 PF17754 MftR C-terminal domain NYE86_14845 PF00440 Bacterial regulatory proteins, tetR family NYE86_14850 PF07690 Major Facilitator Superfamily NYE86_14855 PF02735 Ku70/Ku80 beta-barrel domain NYE86_14860 PF13298 DNA polymerase Ligase (LigD) NYE86_14860 PF04679 ATP dependent DNA ligase C terminal region NYE86_14860 PF01068 ATP dependent DNA ligase domain NYE86_14870 PF00480 ROK family NYE86_14880 PF16874 Glycosyl hydrolase family 36 C-terminal domain NYE86_14880 PF16875 Glycosyl hydrolase family 36 N-terminal domain NYE86_14885 PF01546 Peptidase family M20/M25/M40 NYE86_14885 PF07687 Peptidase dimerisation domain NYE86_14915 PF00440 Bacterial regulatory proteins, tetR family NYE86_14935 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_14935 PF13291 ACT domain NYE86_14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_14940 PF03466 LysR substrate binding domain NYE86_14945 PF00455 DeoR C terminal sensor domain NYE86_14945 PF08220 DeoR-like helix-turn-helix domain NYE86_14960 PF00553 Cellulose binding domain NYE86_14960 PF00331 Glycosyl hydrolase family 10 NYE86_14965 PF00553 Cellulose binding domain NYE86_14965 PF01341 Glycosyl hydrolases family 6 NYE86_14980 PF00891 O-methyltransferase domain NYE86_14995 PF04673 Polyketide synthesis cyclase NYE86_15000 PF03364 Polyketide cyclase / dehydrase and lipid transport NYE86_15005 PF00550 Phosphopantetheine attachment site NYE86_15010 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_15010 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_15015 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_15015 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_15020 PF07883 Cupin domain NYE86_15025 PF04486 SchA/CurD like domain NYE86_15030 PF01494 FAD binding domain NYE86_15035 PF14310 Fibronectin type III-like domain NYE86_15035 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_15035 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_15040 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_15045 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_15055 PF00356 Bacterial regulatory proteins, lacI family NYE86_15070 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NYE86_15070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NYE86_15080 PF00072 Response regulator receiver domain NYE86_15080 PF00196 Bacterial regulatory proteins, luxR family NYE86_15085 PF07730 Histidine kinase NYE86_15090 PF00005 ABC transporter NYE86_15115 PF00072 Response regulator receiver domain NYE86_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_15115 PF13188 PAS domain NYE86_15115 PF00512 His Kinase A (phospho-acceptor) domain NYE86_15115 PF08448 PAS fold NYE86_15120 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_15130 PF00106 short chain dehydrogenase NYE86_15145 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_15150 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_15160 PF01325 Iron dependent repressor, N-terminal DNA binding domain NYE86_15160 PF00480 ROK family NYE86_15165 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NYE86_15165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYE86_15180 PF02515 CoA-transferase family III NYE86_15185 PF00294 pfkB family carbohydrate kinase NYE86_15205 PF03747 ADP-ribosylglycohydrolase NYE86_15210 PF01547 Bacterial extracellular solute-binding protein NYE86_15215 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_15220 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_15225 PF00356 Bacterial regulatory proteins, lacI family NYE86_15230 PF00701 Dihydrodipicolinate synthetase family NYE86_15235 PF07690 Major Facilitator Superfamily NYE86_15240 PF07729 FCD domain NYE86_15240 PF00392 Bacterial regulatory proteins, gntR family NYE86_15255 PF01070 FMN-dependent dehydrogenase NYE86_15265 PF03795 YCII-related domain NYE86_15290 PF02589 LUD domain NYE86_15295 PF11870 Domain of unknown function (DUF3390) NYE86_15295 PF02589 LUD domain NYE86_15295 PF13183 4Fe-4S dicluster domain NYE86_15305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYE86_15305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYE86_15310 PF00596 Class II Aldolase and Adducin N-terminal domain NYE86_15315 PF01261 Xylose isomerase-like TIM barrel NYE86_15320 PF00005 ABC transporter NYE86_15325 PF02653 Branched-chain amino acid transport system / permease component NYE86_15330 PF02653 Branched-chain amino acid transport system / permease component NYE86_15345 PF00356 Bacterial regulatory proteins, lacI family NYE86_15360 PF00561 alpha/beta hydrolase fold NYE86_15375 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_15375 PF00672 HAMP domain NYE86_15380 PF00005 ABC transporter NYE86_15380 PF13732 Domain of unknown function (DUF4162) NYE86_15385 PF01061 ABC-2 type transporter NYE86_15390 PF03795 YCII-related domain NYE86_15395 PF04542 Sigma-70 region 2 NYE86_15395 PF08281 Sigma-70, region 4 NYE86_15405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_15410 PF03559 NDP-hexose 2,3-dehydratase NYE86_15415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYE86_15420 PF16363 GDP-mannose 4,6 dehydratase NYE86_15425 PF00483 Nucleotidyl transferase NYE86_15430 PF01370 NAD dependent epimerase/dehydratase family NYE86_15435 PF01039 Carboxyl transferase domain NYE86_15440 PF07690 Major Facilitator Superfamily NYE86_15445 PF01494 FAD binding domain NYE86_15450 PF03364 Polyketide cyclase / dehydrase and lipid transport NYE86_15455 PF00106 short chain dehydrogenase NYE86_15460 PF00550 Phosphopantetheine attachment site NYE86_15465 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_15465 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_15470 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_15470 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_15480 PF01494 FAD binding domain NYE86_15485 PF00975 Thioesterase domain NYE86_15500 PF07690 Major Facilitator Superfamily NYE86_15510 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_15510 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_15520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_15520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_15545 PF00067 Cytochrome P450 NYE86_15555 PF13460 NAD(P)H-binding NYE86_15565 PF00550 Phosphopantetheine attachment site NYE86_15580 PF00072 Response regulator receiver domain NYE86_15580 PF00486 Transcriptional regulatory protein, C terminal NYE86_15590 PF03795 YCII-related domain NYE86_15595 PF00457 Glycosyl hydrolases family 11 NYE86_15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_15605 PF03466 LysR substrate binding domain NYE86_15620 PF01047 MarR family NYE86_15635 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_15635 PF00107 Zinc-binding dehydrogenase NYE86_15640 PF01270 Glycosyl hydrolases family 8 NYE86_15645 PF03664 Glycosyl hydrolase family 62 NYE86_15645 PF00652 Ricin-type beta-trefoil lectin domain NYE86_15705 PF00082 Subtilase family NYE86_15705 PF09286 Pro-kumamolisin, activation domain NYE86_15780 PF01613 Flavin reductase like domain NYE86_15785 PF09335 SNARE associated Golgi protein NYE86_15790 PF07690 Major Facilitator Superfamily NYE86_15795 PF03143 Elongation factor Tu C-terminal domain NYE86_15795 PF03144 Elongation factor Tu domain 2 NYE86_15795 PF00009 Elongation factor Tu GTP binding domain NYE86_15820 PF09335 SNARE associated Golgi protein NYE86_15825 PF00132 Bacterial transferase hexapeptide (six repeats) NYE86_15830 PF00132 Bacterial transferase hexapeptide (six repeats) NYE86_15840 PF13380 CoA binding domain NYE86_15845 PF09186 Domain of unknown function (DUF1949) NYE86_15845 PF01205 Uncharacterized protein family UPF0029 NYE86_15850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_15850 PF13378 Enolase C-terminal domain-like NYE86_15855 PF00701 Dihydrodipicolinate synthetase family NYE86_15860 PF12320 Type 5 capsule protein repressor C-terminal domain NYE86_15860 PF00149 Calcineurin-like phosphoesterase NYE86_15870 PF13476 AAA domain NYE86_15875 PF01037 Lrp/AsnC ligand binding domain NYE86_15900 PF01053 Cys/Met metabolism PLP-dependent enzyme NYE86_15910 PF00072 Response regulator receiver domain NYE86_15910 PF00486 Transcriptional regulatory protein, C terminal NYE86_15915 PF01494 FAD binding domain NYE86_15920 PF00999 Sodium/hydrogen exchanger family NYE86_15925 PF01494 FAD binding domain NYE86_15935 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_15935 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_15940 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_15940 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_15945 PF00550 Phosphopantetheine attachment site NYE86_15950 PF00106 short chain dehydrogenase NYE86_15955 PF03364 Polyketide cyclase / dehydrase and lipid transport NYE86_15960 PF01494 FAD binding domain NYE86_15965 PF07690 Major Facilitator Superfamily NYE86_15980 PF06722 Protein of unknown function (DUF1205) NYE86_15985 PF00483 Nucleotidyl transferase NYE86_15990 PF16363 GDP-mannose 4,6 dehydratase NYE86_16005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYE86_16010 PF03559 NDP-hexose 2,3-dehydratase NYE86_16015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_16020 PF07690 Major Facilitator Superfamily NYE86_16025 PF03358 NADPH-dependent FMN reductase NYE86_16055 PF00392 Bacterial regulatory proteins, gntR family NYE86_16055 PF00155 Aminotransferase class I and II NYE86_16065 PF00860 Permease family NYE86_16070 PF12680 SnoaL-like domain NYE86_16070 PF08281 Sigma-70, region 4 NYE86_16070 PF04542 Sigma-70 region 2 NYE86_16080 PF00392 Bacterial regulatory proteins, gntR family NYE86_16080 PF07702 UTRA domain NYE86_16085 PF00480 ROK family NYE86_16090 PF03167 Uracil DNA glycosylase superfamily NYE86_16095 PF00206 Lyase NYE86_16095 PF10397 Adenylosuccinate lyase C-terminus NYE86_16120 PF01595 Cyclin M transmembrane N-terminal domain NYE86_16120 PF00571 CBS domain NYE86_16125 PF00571 CBS domain NYE86_16125 PF01595 Cyclin M transmembrane N-terminal domain NYE86_16125 PF03471 Transporter associated domain NYE86_16150 PF00202 Aminotransferase class-III NYE86_16155 PF06968 Biotin and Thiamin Synthesis associated domain NYE86_16155 PF04055 Radical SAM superfamily NYE86_16160 PF00155 Aminotransferase class I and II NYE86_16185 PF00877 NlpC/P60 family NYE86_16190 PF00574 Clp protease NYE86_16200 PF00547 Urease, gamma subunit NYE86_16205 PF00699 Urease beta subunit NYE86_16210 PF01979 Amidohydrolase family NYE86_16210 PF00449 Urease alpha-subunit, N-terminal domain NYE86_16220 PF02492 CobW/HypB/UreG, nucleotide-binding domain NYE86_16225 PF01774 UreD urease accessory protein NYE86_16230 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NYE86_16235 PF02911 Formyl transferase, C-terminal domain NYE86_16235 PF00551 Formyl transferase NYE86_16235 PF01370 NAD dependent epimerase/dehydratase family NYE86_16240 PF00005 ABC transporter NYE86_16245 PF01032 FecCD transport family NYE86_16250 PF01032 FecCD transport family NYE86_16255 PF00668 Condensation domain NYE86_16255 PF13193 AMP-binding enzyme C-terminal domain NYE86_16255 PF00501 AMP-binding enzyme NYE86_16255 PF00550 Phosphopantetheine attachment site NYE86_16255 PF00668 Condensation domain NYE86_16255 PF13193 AMP-binding enzyme C-terminal domain NYE86_16255 PF00501 AMP-binding enzyme NYE86_16255 PF00550 Phosphopantetheine attachment site NYE86_16260 PF03621 MbtH-like protein NYE86_16265 PF01497 Periplasmic binding protein NYE86_16270 PF00005 ABC transporter NYE86_16270 PF00664 ABC transporter transmembrane region NYE86_16285 PF00117 Glutamine amidotransferase class-I NYE86_16285 PF06418 CTP synthase N-terminus NYE86_16290 PF00561 alpha/beta hydrolase fold NYE86_16300 PF01553 Acyltransferase NYE86_16305 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) NYE86_16305 PF05425 Copper resistance protein D NYE86_16310 PF00365 Phosphofructokinase NYE86_16315 PF07685 CobB/CobQ-like glutamine amidotransferase domain NYE86_16320 PF08245 Mur ligase middle domain NYE86_16320 PF08353 Domain of unknown function (DUF1727) NYE86_16330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_16330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_16330 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_16385 PF17863 AAA lid domain NYE86_16385 PF07726 ATPase family associated with various cellular activities (AAA) NYE86_16400 PF16355 Domain of unknown function (DUF4982) NYE86_16400 PF00703 Glycosyl hydrolases family 2 NYE86_16400 PF02837 Glycosyl hydrolases family 2, sugar binding domain NYE86_16400 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NYE86_16405 PF00356 Bacterial regulatory proteins, lacI family NYE86_16410 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_16415 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_16425 PF05175 Methyltransferase small domain NYE86_16425 PF17827 PrmC N-terminal domain NYE86_16430 PF07859 alpha/beta hydrolase fold NYE86_16440 PF03824 High-affinity nickel-transport protein NYE86_16460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_16465 PF02571 Precorrin-6x reductase CbiJ/CobK NYE86_16485 PF00005 ABC transporter NYE86_16495 PF07730 Histidine kinase NYE86_16500 PF00196 Bacterial regulatory proteins, luxR family NYE86_16500 PF00072 Response regulator receiver domain NYE86_16510 PF06965 Na+/H+ antiporter 1 NYE86_16510 PF13462 Thioredoxin NYE86_16520 PF15975 Flotillin NYE86_16520 PF01145 SPFH domain / Band 7 family NYE86_16525 PF03780 Asp23 family, cell envelope-related function NYE86_16550 PF03033 Glycosyltransferase family 28 N-terminal domain NYE86_16605 PF01494 FAD binding domain NYE86_16720 PF00899 ThiF family NYE86_16900 PF13280 WYL domain NYE86_16900 PF08279 HTH domain NYE86_16935 PF01039 Carboxyl transferase domain NYE86_16940 PF00501 AMP-binding enzyme NYE86_16945 PF01613 Flavin reductase like domain NYE86_16950 PF01494 FAD binding domain NYE86_16955 PF01494 FAD binding domain NYE86_16960 PF00698 Acyl transferase domain NYE86_16960 PF00550 Phosphopantetheine attachment site NYE86_16960 PF00975 Thioesterase domain NYE86_16960 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_16960 PF08990 Erythronolide synthase docking NYE86_16960 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_16960 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_16960 PF08659 KR domain NYE86_16965 PF00550 Phosphopantetheine attachment site NYE86_16965 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_16965 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_16965 PF08659 KR domain NYE86_16965 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_16965 PF00698 Acyl transferase domain NYE86_16975 PF08990 Erythronolide synthase docking NYE86_16975 PF00698 Acyl transferase domain NYE86_16975 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_16975 PF08659 KR domain NYE86_16975 PF00975 Thioesterase domain NYE86_16975 PF00550 Phosphopantetheine attachment site NYE86_16975 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_16975 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_16985 PF04820 Tryptophan halogenase NYE86_16995 PF00975 Thioesterase domain NYE86_17000 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_17000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_17000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_17005 PF00501 AMP-binding enzyme NYE86_17005 PF13193 AMP-binding enzyme C-terminal domain NYE86_17010 PF00196 Bacterial regulatory proteins, luxR family NYE86_17010 PF00072 Response regulator receiver domain NYE86_17015 PF00999 Sodium/hydrogen exchanger family NYE86_17020 PF00072 Response regulator receiver domain NYE86_17020 PF00196 Bacterial regulatory proteins, luxR family NYE86_17075 PF00082 Subtilase family NYE86_17080 PF00072 Response regulator receiver domain NYE86_17080 PF00211 Adenylate and Guanylate cyclase catalytic domain NYE86_17085 PF07690 Major Facilitator Superfamily NYE86_17110 PF00486 Transcriptional regulatory protein, C terminal NYE86_17110 PF00931 NB-ARC domain NYE86_17110 PF03704 Bacterial transcriptional activator domain NYE86_17155 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_17180 PF03704 Bacterial transcriptional activator domain NYE86_17180 PF00931 NB-ARC domain NYE86_17180 PF00486 Transcriptional regulatory protein, C terminal NYE86_17190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYE86_17245 PF01965 DJ-1/PfpI family NYE86_17265 PF01980 tRNA-methyltransferase O NYE86_17265 PF18389 TrmO C-terminal domain NYE86_17270 PF13419 Haloacid dehalogenase-like hydrolase NYE86_17280 PF00440 Bacterial regulatory proteins, tetR family NYE86_17290 PF00293 NUDIX domain NYE86_17305 PF16859 Tetracyclin repressor-like, C-terminal domain NYE86_17305 PF00440 Bacterial regulatory proteins, tetR family NYE86_17330 PF00005 ABC transporter NYE86_17335 PF01497 Periplasmic binding protein NYE86_17340 PF01032 FecCD transport family NYE86_17345 PF00248 Aldo/keto reductase family NYE86_17350 PF00440 Bacterial regulatory proteins, tetR family NYE86_17355 PF00082 Subtilase family NYE86_17355 PF05922 Peptidase inhibitor I9 NYE86_17360 PF12894 Anaphase-promoting complex subunit 4 WD40 domain NYE86_17360 PF00400 WD domain, G-beta repeat NYE86_17380 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_17380 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_17380 PF08659 KR domain NYE86_17380 PF00668 Condensation domain NYE86_17380 PF13193 AMP-binding enzyme C-terminal domain NYE86_17380 PF14765 Polyketide synthase dehydratase NYE86_17380 PF00501 AMP-binding enzyme NYE86_17380 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_17380 PF00550 Phosphopantetheine attachment site NYE86_17385 PF04072 Leucine carboxyl methyltransferase NYE86_17390 PF00248 Aldo/keto reductase family NYE86_17395 PF00970 Oxidoreductase FAD-binding domain NYE86_17395 PF00175 Oxidoreductase NAD-binding domain NYE86_17395 PF00042 Globin NYE86_17410 PF00082 Subtilase family NYE86_17410 PF05922 Peptidase inhibitor I9 NYE86_17420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NYE86_17425 PF16859 Tetracyclin repressor-like, C-terminal domain NYE86_17425 PF00440 Bacterial regulatory proteins, tetR family NYE86_17430 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_17430 PF00107 Zinc-binding dehydrogenase NYE86_17435 PF12852 Cupin NYE86_17435 PF12833 Helix-turn-helix domain NYE86_17450 PF03793 PASTA domain NYE86_17450 PF00069 Protein kinase domain NYE86_17460 PF00106 short chain dehydrogenase NYE86_17470 PF00440 Bacterial regulatory proteins, tetR family NYE86_17470 PF17925 Tetracyclin repressor-like, C-terminal domain NYE86_17480 PF00296 Luciferase-like monooxygenase NYE86_17495 PF00005 ABC transporter NYE86_17495 PF02687 FtsX-like permease family NYE86_17495 PF12704 MacB-like periplasmic core domain NYE86_17500 PF00005 ABC transporter NYE86_17500 PF02687 FtsX-like permease family NYE86_17500 PF12704 MacB-like periplasmic core domain NYE86_17515 PF00072 Response regulator receiver domain NYE86_17515 PF00486 Transcriptional regulatory protein, C terminal NYE86_17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_17520 PF00672 HAMP domain NYE86_17520 PF00512 His Kinase A (phospho-acceptor) domain NYE86_17525 PF02016 LD-carboxypeptidase N-terminal domain NYE86_17525 PF17676 LD-carboxypeptidase C-terminal domain NYE86_17545 PF00561 alpha/beta hydrolase fold NYE86_17550 PF06736 Protein of unknown function (DUF1211) NYE86_17575 PF08241 Methyltransferase domain NYE86_17605 PF00440 Bacterial regulatory proteins, tetR family NYE86_17610 PF08281 Sigma-70, region 4 NYE86_17610 PF04542 Sigma-70 region 2 NYE86_17640 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_17645 PF00266 Aminotransferase class-V NYE86_17650 PF08241 Methyltransferase domain NYE86_17660 PF01475 Ferric uptake regulator family NYE86_17670 PF00950 ABC 3 transport family NYE86_17675 PF00005 ABC transporter NYE86_17680 PF01297 Zinc-uptake complex component A periplasmic NYE86_17690 PF01209 ubiE/COQ5 methyltransferase family NYE86_17705 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_17705 PF00107 Zinc-binding dehydrogenase NYE86_17715 PF12680 SnoaL-like domain NYE86_17715 PF08281 Sigma-70, region 4 NYE86_17715 PF04542 Sigma-70 region 2 NYE86_17725 PF00583 Acetyltransferase (GNAT) family NYE86_17725 PF13673 Acetyltransferase (GNAT) domain NYE86_17740 PF01197 Ribosomal protein L31 NYE86_17745 PF00471 Ribosomal protein L33 NYE86_17755 PF18029 Glyoxalase-like domain NYE86_17755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYE86_17765 PF00248 Aldo/keto reductase family NYE86_17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_17780 PF03466 LysR substrate binding domain NYE86_17815 PF07687 Peptidase dimerisation domain NYE86_17815 PF01546 Peptidase family M20/M25/M40 NYE86_17820 PF16363 GDP-mannose 4,6 dehydratase NYE86_17830 PF03129 Anticodon binding domain NYE86_17830 PF02824 TGS domain NYE86_17830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYE86_17830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NYE86_17835 PF00106 short chain dehydrogenase NYE86_17840 PF08281 Sigma-70, region 4 NYE86_17840 PF04542 Sigma-70 region 2 NYE86_17840 PF12680 SnoaL-like domain NYE86_17855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NYE86_17855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NYE86_17855 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NYE86_17860 PF02233 NAD(P) transhydrogenase beta subunit NYE86_17865 PF01638 HxlR-like helix-turn-helix NYE86_17880 PF06441 Epoxide hydrolase N terminus NYE86_17905 PF00248 Aldo/keto reductase family NYE86_17915 PF02018 Carbohydrate binding domain NYE86_17915 PF00041 Fibronectin type III domain NYE86_17915 PF00704 Glycosyl hydrolases family 18 NYE86_17950 PF13649 Methyltransferase domain NYE86_17955 PF01145 SPFH domain / Band 7 family NYE86_17965 PF00248 Aldo/keto reductase family NYE86_17975 PF07690 Major Facilitator Superfamily NYE86_17980 PF00005 ABC transporter NYE86_17980 PF00571 CBS domain NYE86_17985 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_17990 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18000 PF01301 Glycosyl hydrolases family 35 NYE86_18005 PF00356 Bacterial regulatory proteins, lacI family NYE86_18015 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18020 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18035 PF00106 short chain dehydrogenase NYE86_18055 PF07732 Multicopper oxidase NYE86_18055 PF07731 Multicopper oxidase NYE86_18055 PF00394 Multicopper oxidase NYE86_18060 PF04679 ATP dependent DNA ligase C terminal region NYE86_18060 PF01068 ATP dependent DNA ligase domain NYE86_18060 PF13298 DNA polymerase Ligase (LigD) NYE86_18075 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NYE86_18075 PF01276 Orn/Lys/Arg decarboxylase, major domain NYE86_18080 PF00106 short chain dehydrogenase NYE86_18100 PF00196 Bacterial regulatory proteins, luxR family NYE86_18110 PF01300 Telomere recombination NYE86_18120 PF00115 Cytochrome C and Quinol oxidase polypeptide I NYE86_18125 PF13631 Cytochrome b(N-terminal)/b6/petB NYE86_18135 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_18135 PF00672 HAMP domain NYE86_18140 PF00583 Acetyltransferase (GNAT) family NYE86_18160 PF05121 Gas vesicle protein K NYE86_18160 PF00741 Gas vesicle protein NYE86_18175 PF00741 Gas vesicle protein NYE86_18180 PF03364 Polyketide cyclase / dehydrase and lipid transport NYE86_18200 PF00741 Gas vesicle protein NYE86_18210 PF00857 Isochorismatase family NYE86_18215 PF00355 Rieske [2Fe-2S] domain NYE86_18225 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_18225 PF13823 Alcohol dehydrogenase GroES-associated NYE86_18225 PF00107 Zinc-binding dehydrogenase NYE86_18230 PF13419 Haloacid dehalogenase-like hydrolase NYE86_18250 PF05175 Methyltransferase small domain NYE86_18250 PF17827 PrmC N-terminal domain NYE86_18255 PF00296 Luciferase-like monooxygenase NYE86_18260 PF01565 FAD binding domain NYE86_18260 PF13183 4Fe-4S dicluster domain NYE86_18260 PF02913 FAD linked oxidases, C-terminal domain NYE86_18265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYE86_18265 PF00205 Thiamine pyrophosphate enzyme, central domain NYE86_18265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYE86_18270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_18270 PF13378 Enolase C-terminal domain-like NYE86_18280 PF03900 Porphobilinogen deaminase, C-terminal domain NYE86_18280 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NYE86_18285 PF04321 RmlD substrate binding domain NYE86_18290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_18290 PF13378 Enolase C-terminal domain-like NYE86_18310 PF00400 WD domain, G-beta repeat NYE86_18310 PF00069 Protein kinase domain NYE86_18375 PF01522 Polysaccharide deacetylase NYE86_18385 PF04542 Sigma-70 region 2 NYE86_18385 PF04545 Sigma-70, region 4 NYE86_18405 PF01451 Low molecular weight phosphotyrosine protein phosphatase NYE86_18410 PF01022 Bacterial regulatory protein, arsR family NYE86_18415 PF00230 Major intrinsic protein NYE86_18475 PF16990 Carbohydrate binding module (family 35) NYE86_18475 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain NYE86_18475 PF02837 Glycosyl hydrolases family 2, sugar binding domain NYE86_18475 PF00703 Glycosyl hydrolases family 2 NYE86_18480 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NYE86_18480 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NYE86_18480 PF02278 Polysaccharide lyase family 8, super-sandwich domain NYE86_18485 PF00356 Bacterial regulatory proteins, lacI family NYE86_18490 PF01571 Aminomethyltransferase folate-binding domain NYE86_18490 PF08669 Glycine cleavage T-protein C-terminal barrel domain NYE86_18490 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_18490 PF17806 Sarcosine oxidase A3 domain NYE86_18495 PF01547 Bacterial extracellular solute-binding protein NYE86_18500 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18505 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18510 PF05448 Acetyl xylan esterase (AXE1) NYE86_18535 PF01593 Flavin containing amine oxidoreductase NYE86_18555 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18560 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18575 PF00144 Beta-lactamase NYE86_18585 PF07690 Major Facilitator Superfamily NYE86_18590 PF00196 Bacterial regulatory proteins, luxR family NYE86_18590 PF00072 Response regulator receiver domain NYE86_18600 PF13185 GAF domain NYE86_18600 PF07730 Histidine kinase NYE86_18600 PF13492 GAF domain NYE86_18600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_18615 PF00582 Universal stress protein family NYE86_18620 PF00582 Universal stress protein family NYE86_18630 PF03055 Retinal pigment epithelial membrane protein NYE86_18640 PF05378 Hydantoinase/oxoprolinase N-terminal region NYE86_18640 PF01968 Hydantoinase/oxoprolinase NYE86_18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_18650 PF03466 LysR substrate binding domain NYE86_18665 PF00582 Universal stress protein family NYE86_18680 PF03176 MMPL family NYE86_18685 PF02583 Metal-sensitive transcriptional repressor NYE86_18700 PF00689 Cation transporting ATPase, C-terminus NYE86_18700 PF00690 Cation transporter/ATPase, N-terminus NYE86_18705 PF00478 IMP dehydrogenase / GMP reductase domain NYE86_18705 PF00571 CBS domain NYE86_18710 PF10503 Esterase PHB depolymerase NYE86_18725 PF01638 HxlR-like helix-turn-helix NYE86_18755 PF00698 Acyl transferase domain NYE86_18755 PF08990 Erythronolide synthase docking NYE86_18755 PF00550 Phosphopantetheine attachment site NYE86_18755 PF08659 KR domain NYE86_18755 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_18755 PF14765 Polyketide synthase dehydratase NYE86_18755 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_18755 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_18755 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_18785 PF03600 Citrate transporter NYE86_18815 PF00654 Voltage gated chloride channel NYE86_18825 PF00916 Sulfate permease family NYE86_18825 PF01740 STAS domain NYE86_18830 PF01061 ABC-2 type transporter NYE86_18835 PF00005 ABC transporter NYE86_18835 PF13732 Domain of unknown function (DUF4162) NYE86_18845 PF02627 Carboxymuconolactone decarboxylase family NYE86_18850 PF04542 Sigma-70 region 2 NYE86_18850 PF08281 Sigma-70, region 4 NYE86_18850 PF12680 SnoaL-like domain NYE86_18860 PF00425 chorismate binding enzyme NYE86_18860 PF04715 Anthranilate synthase component I, N terminal region NYE86_18860 PF00117 Glutamine amidotransferase class-I NYE86_18885 PF00478 IMP dehydrogenase / GMP reductase domain NYE86_18885 PF00571 CBS domain NYE86_18890 PF02358 Trehalose-phosphatase NYE86_18890 PF03636 Glycosyl hydrolase family 65, N-terminal domain NYE86_18890 PF03632 Glycosyl hydrolase family 65 central catalytic domain NYE86_18890 PF03633 Glycosyl hydrolase family 65, C-terminal domain NYE86_18895 PF08448 PAS fold NYE86_18895 PF13466 STAS domain NYE86_18895 PF13581 Histidine kinase-like ATPase domain NYE86_18895 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_18900 PF00356 Bacterial regulatory proteins, lacI family NYE86_18910 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18915 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18925 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18930 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_18950 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NYE86_18950 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NYE86_18955 PF03450 CO dehydrogenase flavoprotein C-terminal domain NYE86_18955 PF00941 FAD binding domain in molybdopterin dehydrogenase NYE86_18960 PF10518 TAT (twin-arginine translocation) pathway signal sequence NYE86_18960 PF01799 [2Fe-2S] binding domain NYE86_18960 PF00111 2Fe-2S iron-sulfur cluster binding domain NYE86_18965 PF02311 AraC-like ligand binding domain NYE86_18965 PF12833 Helix-turn-helix domain NYE86_18980 PF00942 Cellulose binding domain NYE86_18980 PF12891 Glycoside hydrolase family 44 NYE86_18985 PF13472 GDSL-like Lipase/Acylhydrolase family NYE86_18985 PF07859 alpha/beta hydrolase fold NYE86_18990 PF01055 Glycosyl hydrolases family 31 NYE86_18995 PF18448 Carbohydrate binding domain NYE86_18995 PF03442 Carbohydrate binding domain X2 NYE86_18995 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_19000 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NYE86_19000 PF04616 Glycosyl hydrolases family 43 NYE86_19005 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NYE86_19015 PF13416 Bacterial extracellular solute-binding protein NYE86_19020 PF00356 Bacterial regulatory proteins, lacI family NYE86_19035 PF00356 Bacterial regulatory proteins, lacI family NYE86_19040 PF00356 Bacterial regulatory proteins, lacI family NYE86_19045 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_19050 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_19060 PF07944 Beta-L-arabinofuranosidase, GH127 NYE86_19065 PF08241 Methyltransferase domain NYE86_19070 PF05724 Thiopurine S-methyltransferase (TPMT) NYE86_19090 PF12464 Maltose acetyltransferase NYE86_19090 PF00132 Bacterial transferase hexapeptide (six repeats) NYE86_19115 PF02567 Phenazine biosynthesis-like protein NYE86_19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_19120 PF03466 LysR substrate binding domain NYE86_19135 PF04542 Sigma-70 region 2 NYE86_19135 PF12680 SnoaL-like domain NYE86_19135 PF08281 Sigma-70, region 4 NYE86_19145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NYE86_19150 PF00392 Bacterial regulatory proteins, gntR family NYE86_19150 PF00155 Aminotransferase class I and II NYE86_19170 PF03412 Peptidase C39 family NYE86_19170 PF00005 ABC transporter NYE86_19170 PF00664 ABC transporter transmembrane region NYE86_19175 PF03412 Peptidase C39 family NYE86_19175 PF00005 ABC transporter NYE86_19175 PF00664 ABC transporter transmembrane region NYE86_19180 PF00294 pfkB family carbohydrate kinase NYE86_19185 PF04261 Dyp-type peroxidase family NYE86_19200 PF13519 von Willebrand factor type A domain NYE86_19215 PF04542 Sigma-70 region 2 NYE86_19215 PF08281 Sigma-70, region 4 NYE86_19245 PF00069 Protein kinase domain NYE86_19245 PF03793 PASTA domain NYE86_19265 PF00012 Hsp70 protein NYE86_19280 PF00544 Pectate lyase NYE86_19300 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_19305 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_19310 PF00920 Dehydratase family NYE86_19315 PF00701 Dihydrodipicolinate synthetase family NYE86_19320 PF07729 FCD domain NYE86_19320 PF00392 Bacterial regulatory proteins, gntR family NYE86_19325 PF00075 RNase H NYE86_19335 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_19345 PF01047 MarR family NYE86_19365 PF13419 Haloacid dehalogenase-like hydrolase NYE86_19370 PF03633 Glycosyl hydrolase family 65, C-terminal domain NYE86_19370 PF03636 Glycosyl hydrolase family 65, N-terminal domain NYE86_19370 PF03632 Glycosyl hydrolase family 65 central catalytic domain NYE86_19375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_19375 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_19385 PF14716 Helix-hairpin-helix domain NYE86_19385 PF14791 DNA polymerase beta thumb NYE86_19385 PF02811 PHP domain NYE86_19390 PF01183 Glycosyl hydrolases family 25 NYE86_19390 PF01471 Putative peptidoglycan binding domain NYE86_19400 PF09335 SNARE associated Golgi protein NYE86_19405 PF03576 Peptidase family S58 NYE86_19410 PF03976 Polyphosphate kinase 2 (PPK2) NYE86_19425 PF00106 short chain dehydrogenase NYE86_19440 PF07859 alpha/beta hydrolase fold NYE86_19480 PF00893 Small Multidrug Resistance protein NYE86_19490 PF16338 Domain of unknown function (DUF4968) NYE86_19490 PF01055 Glycosyl hydrolases family 31 NYE86_19490 PF17137 Domain of unknown function (DUF5110) NYE86_19495 PF07690 Major Facilitator Superfamily NYE86_19500 PF03176 MMPL family NYE86_19510 PF00005 ABC transporter NYE86_19530 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain NYE86_19530 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NYE86_19540 PF00652 Ricin-type beta-trefoil lectin domain NYE86_19540 PF03664 Glycosyl hydrolase family 62 NYE86_19545 PF01341 Glycosyl hydrolases family 6 NYE86_19545 PF00553 Cellulose binding domain NYE86_19555 PF16925 Tetracyclin repressor-like, C-terminal domain NYE86_19555 PF00440 Bacterial regulatory proteins, tetR family NYE86_19565 PF11066 Protein of unknown function (DUF2867) NYE86_19565 PF13460 NAD(P)H-binding NYE86_19570 PF01965 DJ-1/PfpI family NYE86_19570 PF12833 Helix-turn-helix domain NYE86_19585 PF03466 LysR substrate binding domain NYE86_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_19595 PF06441 Epoxide hydrolase N terminus NYE86_19600 PF01047 MarR family NYE86_19605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NYE86_19605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NYE86_19610 PF08267 Cobalamin-independent synthase, N-terminal domain NYE86_19610 PF01717 Cobalamin-independent synthase, Catalytic domain NYE86_19625 PF01047 MarR family NYE86_19660 PF00440 Bacterial regulatory proteins, tetR family NYE86_19660 PF08362 YcdC-like protein, C-terminal region NYE86_19665 PF00248 Aldo/keto reductase family NYE86_19670 PF00440 Bacterial regulatory proteins, tetR family NYE86_19705 PF00356 Bacterial regulatory proteins, lacI family NYE86_19715 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_19720 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_19730 PF07690 Major Facilitator Superfamily NYE86_19740 PF03594 Benzoate membrane transport protein NYE86_19745 PF00356 Bacterial regulatory proteins, lacI family NYE86_19750 PF07690 Major Facilitator Superfamily NYE86_19760 PF12680 SnoaL-like domain NYE86_19760 PF04542 Sigma-70 region 2 NYE86_19760 PF08281 Sigma-70, region 4 NYE86_19775 PF00009 Elongation factor Tu GTP binding domain NYE86_19775 PF00679 Elongation factor G C-terminus NYE86_19775 PF03764 Elongation factor G, domain IV NYE86_19780 PF13085 2Fe-2S iron-sulfur cluster binding domain NYE86_19785 PF02910 Fumarate reductase flavoprotein C-term NYE86_19785 PF00890 FAD binding domain NYE86_19795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_19795 PF03466 LysR substrate binding domain NYE86_19800 PF07690 Major Facilitator Superfamily NYE86_19805 PF01638 HxlR-like helix-turn-helix NYE86_19815 PF01872 RibD C-terminal domain NYE86_19835 PF00111 2Fe-2S iron-sulfur cluster binding domain NYE86_19835 PF00970 Oxidoreductase FAD-binding domain NYE86_19835 PF00175 Oxidoreductase NAD-binding domain NYE86_19840 PF01883 Iron-sulfur cluster assembly protein NYE86_19845 PF05138 Phenylacetic acid catabolic protein NYE86_19850 PF06243 Phenylacetic acid degradation B NYE86_19855 PF05138 Phenylacetic acid catabolic protein NYE86_19860 PF00108 Thiolase, N-terminal domain NYE86_19860 PF02803 Thiolase, C-terminal domain NYE86_19865 PF14535 AMP-binding enzyme C-terminal domain NYE86_19865 PF00501 AMP-binding enzyme NYE86_19870 PF03737 Aldolase/RraA NYE86_19875 PF16499 Alpha galactosidase A NYE86_19875 PF17801 Alpha galactosidase C-terminal beta sandwich domain NYE86_19885 PF04185 Phosphoesterase family NYE86_19885 PF05506 Domain of unknown function (DUF756) NYE86_19890 PF00149 Calcineurin-like phosphoesterase NYE86_19890 PF16656 Purple acid Phosphatase, N-terminal domain NYE86_19900 PF12704 MacB-like periplasmic core domain NYE86_19900 PF00005 ABC transporter NYE86_19900 PF02687 FtsX-like permease family NYE86_19920 PF12399 Branched-chain amino acid ATP-binding cassette transporter NYE86_19920 PF00005 ABC transporter NYE86_19925 PF00005 ABC transporter NYE86_19930 PF02653 Branched-chain amino acid transport system / permease component NYE86_19940 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NYE86_19940 PF02278 Polysaccharide lyase family 8, super-sandwich domain NYE86_19940 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NYE86_19950 PF07690 Major Facilitator Superfamily NYE86_19975 PF11066 Protein of unknown function (DUF2867) NYE86_19975 PF13460 NAD(P)H-binding NYE86_19985 PF00553 Cellulose binding domain NYE86_19985 PF00331 Glycosyl hydrolase family 10 NYE86_19995 PF00480 ROK family NYE86_20005 PF03422 Carbohydrate binding module (family 6) NYE86_20005 PF00457 Glycosyl hydrolases family 11 NYE86_20010 PF13407 Periplasmic binding protein domain NYE86_20015 PF02653 Branched-chain amino acid transport system / permease component NYE86_20020 PF00005 ABC transporter NYE86_20030 PF04261 Dyp-type peroxidase family NYE86_20035 PF08386 TAP-like protein NYE86_20035 PF00561 alpha/beta hydrolase fold NYE86_20045 PF05368 NmrA-like family NYE86_20060 PF07690 Major Facilitator Superfamily NYE86_20080 PF03466 LysR substrate binding domain NYE86_20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_20120 PF18370 Rhamnogalacturonan I lyases beta-sheet domain NYE86_20140 PF01252 Signal peptidase (SPase) II NYE86_20145 PF09363 XFP C-terminal domain NYE86_20145 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NYE86_20145 PF09364 XFP N-terminal domain NYE86_20155 PF00248 Aldo/keto reductase family NYE86_20165 PF00561 alpha/beta hydrolase fold NYE86_20170 PF02423 Ornithine cyclodeaminase/mu-crystallin family NYE86_20195 PF01451 Low molecular weight phosphotyrosine protein phosphatase NYE86_20210 PF08241 Methyltransferase domain NYE86_20225 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain NYE86_20225 PF02837 Glycosyl hydrolases family 2, sugar binding domain NYE86_20225 PF00703 Glycosyl hydrolases family 2 NYE86_20335 PF00392 Bacterial regulatory proteins, gntR family NYE86_20335 PF07729 FCD domain NYE86_20395 PF00037 4Fe-4S binding domain NYE86_20410 PF03167 Uracil DNA glycosylase superfamily NYE86_20415 PF04343 Protein of unknown function, DUF488 NYE86_20420 PF07730 Histidine kinase NYE86_20420 PF13185 GAF domain NYE86_20420 PF13492 GAF domain NYE86_20420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_20480 PF00248 Aldo/keto reductase family NYE86_20530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_20530 PF13378 Enolase C-terminal domain-like NYE86_20540 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20545 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20570 PF00561 alpha/beta hydrolase fold NYE86_20580 PF17974 Galactose-binding domain-like NYE86_20580 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase NYE86_20580 PF18080 Galactose mutarotase-like fold domain NYE86_20580 PF12905 Endo-alpha-N-acetylgalactosaminidase NYE86_20580 PF17451 Glycosyl hydrolase 101 beta sandwich domain NYE86_20580 PF08305 NPCBM/NEW2 domain NYE86_20585 PF17801 Alpha galactosidase C-terminal beta sandwich domain NYE86_20585 PF16499 Alpha galactosidase A NYE86_20595 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20600 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20615 PF00480 ROK family NYE86_20645 PF01625 Peptide methionine sulfoxide reductase NYE86_20650 PF08281 Sigma-70, region 4 NYE86_20650 PF12680 SnoaL-like domain NYE86_20650 PF04542 Sigma-70 region 2 NYE86_20675 PF01568 Molydopterin dinucleotide binding domain NYE86_20675 PF00384 Molybdopterin oxidoreductase NYE86_20680 PF13247 4Fe-4S dicluster domain NYE86_20680 PF14711 Respiratory nitrate reductase beta C-terminal NYE86_20685 PF02613 Nitrate reductase delta subunit NYE86_20690 PF00384 Molybdopterin oxidoreductase NYE86_20690 PF02665 Nitrate reductase gamma subunit NYE86_20690 PF02613 Nitrate reductase delta subunit NYE86_20720 PF00246 Zinc carboxypeptidase NYE86_20725 PF07969 Amidohydrolase family NYE86_20745 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20750 PF12911 N-terminal TM domain of oligopeptide transport permease C NYE86_20750 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_20755 PF00005 ABC transporter NYE86_20760 PF00005 ABC transporter NYE86_20760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_20795 PF00005 ABC transporter NYE86_20810 PF00106 short chain dehydrogenase NYE86_20820 PF00375 Sodium:dicarboxylate symporter family NYE86_20835 PF16499 Alpha galactosidase A NYE86_20835 PF17801 Alpha galactosidase C-terminal beta sandwich domain NYE86_20840 PF00480 ROK family NYE86_20855 PF00550 Phosphopantetheine attachment site NYE86_20855 PF00975 Thioesterase domain NYE86_20855 PF13193 AMP-binding enzyme C-terminal domain NYE86_20855 PF08241 Methyltransferase domain NYE86_20855 PF00391 PEP-utilising enzyme, mobile domain NYE86_20855 PF00501 AMP-binding enzyme NYE86_20855 PF00668 Condensation domain NYE86_20900 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NYE86_20920 PF00535 Glycosyl transferase family 2 NYE86_20925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_20925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_20940 PF00800 Prephenate dehydratase NYE86_20940 PF01842 ACT domain NYE86_20940 PF01817 Chorismate mutase type II NYE86_20950 PF00664 ABC transporter transmembrane region NYE86_20950 PF00005 ABC transporter NYE86_20955 PF16990 Carbohydrate binding module (family 35) NYE86_20955 PF03422 Carbohydrate binding module (family 6) NYE86_20955 PF13199 Glycosyl hydrolase family 66 NYE86_20960 PF00356 Bacterial regulatory proteins, lacI family NYE86_20965 PF01547 Bacterial extracellular solute-binding protein NYE86_20970 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20975 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_20980 PF00128 Alpha amylase, catalytic domain NYE86_20985 PF00356 Bacterial regulatory proteins, lacI family NYE86_21000 PF05977 Transmembrane secretion effector NYE86_21025 PF00069 Protein kinase domain NYE86_21025 PF03793 PASTA domain NYE86_21045 PF12680 SnoaL-like domain NYE86_21045 PF08281 Sigma-70, region 4 NYE86_21045 PF04542 Sigma-70 region 2 NYE86_21055 PF04545 Sigma-70, region 4 NYE86_21055 PF04542 Sigma-70 region 2 NYE86_21075 PF00355 Rieske [2Fe-2S] domain NYE86_21080 PF04616 Glycosyl hydrolases family 43 NYE86_21080 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NYE86_21090 PF03211 Pectate lyase NYE86_21095 PF14508 Glycosyl-hydrolase 97 N-terminal NYE86_21095 PF10566 Glycoside hydrolase 97 NYE86_21095 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation NYE86_21130 PF00106 short chain dehydrogenase NYE86_21135 PF00378 Enoyl-CoA hydratase/isomerase NYE86_21150 PF00501 AMP-binding enzyme NYE86_21150 PF13193 AMP-binding enzyme C-terminal domain NYE86_21155 PF01494 FAD binding domain NYE86_21165 PF03747 ADP-ribosylglycohydrolase NYE86_21205 PF06463 Molybdenum Cofactor Synthesis C NYE86_21205 PF04055 Radical SAM superfamily NYE86_21225 PF00293 NUDIX domain NYE86_21240 PF00106 short chain dehydrogenase NYE86_21245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_21245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_21255 PF00857 Isochorismatase family NYE86_21260 PF00425 chorismate binding enzyme NYE86_21260 PF00117 Glutamine amidotransferase class-I NYE86_21270 PF00455 DeoR C terminal sensor domain NYE86_21270 PF08220 DeoR-like helix-turn-helix domain NYE86_21275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYE86_21275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NYE86_21285 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_21290 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_21315 PF08241 Methyltransferase domain NYE86_21330 PF13298 DNA polymerase Ligase (LigD) NYE86_21330 PF01068 ATP dependent DNA ligase domain NYE86_21330 PF04679 ATP dependent DNA ligase C terminal region NYE86_21335 PF07690 Major Facilitator Superfamily NYE86_21345 PF00672 HAMP domain NYE86_21345 PF00512 His Kinase A (phospho-acceptor) domain NYE86_21345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_21350 PF00486 Transcriptional regulatory protein, C terminal NYE86_21350 PF00072 Response regulator receiver domain NYE86_21355 PF00970 Oxidoreductase FAD-binding domain NYE86_21355 PF00042 Globin NYE86_21355 PF00175 Oxidoreductase NAD-binding domain NYE86_21370 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_21370 PF00107 Zinc-binding dehydrogenase NYE86_21370 PF13823 Alcohol dehydrogenase GroES-associated NYE86_21390 PF00544 Pectate lyase NYE86_21395 PF00561 alpha/beta hydrolase fold NYE86_21405 PF07690 Major Facilitator Superfamily NYE86_21425 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_21425 PF00672 HAMP domain NYE86_21465 PF00005 ABC transporter NYE86_21470 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_21485 PF00296 Luciferase-like monooxygenase NYE86_21490 PF00296 Luciferase-like monooxygenase NYE86_21495 PF00296 Luciferase-like monooxygenase NYE86_21505 PF01613 Flavin reductase like domain NYE86_21515 PF07731 Multicopper oxidase NYE86_21515 PF07732 Multicopper oxidase NYE86_21515 PF00394 Multicopper oxidase NYE86_21530 PF00089 Trypsin NYE86_21530 PF02983 Alpha-lytic protease prodomain NYE86_21535 PF00156 Phosphoribosyl transferase domain NYE86_21535 PF01738 Dienelactone hydrolase family NYE86_21540 PF01738 Dienelactone hydrolase family NYE86_21540 PF00156 Phosphoribosyl transferase domain NYE86_21545 PF00296 Luciferase-like monooxygenase NYE86_21555 PF00082 Subtilase family NYE86_21555 PF05922 Peptidase inhibitor I9 NYE86_21605 PF04237 YjbR NYE86_21610 PF08281 Sigma-70, region 4 NYE86_21610 PF04542 Sigma-70 region 2 NYE86_21625 PF00854 POT family NYE86_21645 PF00005 ABC transporter NYE86_21655 PF00392 Bacterial regulatory proteins, gntR family NYE86_21655 PF07729 FCD domain NYE86_21660 PF13416 Bacterial extracellular solute-binding protein NYE86_21665 PF08402 TOBE domain NYE86_21665 PF00005 ABC transporter NYE86_21670 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_21675 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_21695 PF13411 MerR HTH family regulatory protein NYE86_21695 PF07739 TipAS antibiotic-recognition domain NYE86_21725 PF00561 alpha/beta hydrolase fold NYE86_21745 PF00374 Nickel-dependent hydrogenase NYE86_21745 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NYE86_21745 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NYE86_21750 PF00361 Proton-conducting membrane transporter NYE86_21750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NYE86_21760 PF00146 NADH dehydrogenase NYE86_21765 PF00361 Proton-conducting membrane transporter NYE86_21770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NYE86_21790 PF02082 Transcriptional regulator NYE86_21795 PF00970 Oxidoreductase FAD-binding domain NYE86_21795 PF00042 Globin NYE86_21795 PF00175 Oxidoreductase NAD-binding domain NYE86_21805 PF07690 Major Facilitator Superfamily NYE86_21810 PF00067 Cytochrome P450 NYE86_21815 PF00348 Polyprenyl synthetase NYE86_21820 PF00067 Cytochrome P450 NYE86_21825 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NYE86_21840 PF00574 Clp protease NYE86_21845 PF00574 Clp protease NYE86_21850 PF00892 EamA-like transporter family NYE86_21870 PF00356 Bacterial regulatory proteins, lacI family NYE86_21890 PF13580 SIS domain NYE86_21905 PF05448 Acetyl xylan esterase (AXE1) NYE86_21930 PF00701 Dihydrodipicolinate synthetase family NYE86_21945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYE86_21950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_21950 PF13378 Enolase C-terminal domain-like NYE86_21960 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_21965 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22000 PF02838 Glycosyl hydrolase family 20, domain 2 NYE86_22000 PF00728 Glycosyl hydrolase family 20, catalytic domain NYE86_22005 PF01243 Pyridoxamine 5'-phosphate oxidase NYE86_22005 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NYE86_22010 PF02567 Phenazine biosynthesis-like protein NYE86_22020 PF00425 chorismate binding enzyme NYE86_22020 PF00117 Glutamine amidotransferase class-I NYE86_22025 PF03284 Phenazine biosynthesis protein A/B NYE86_22030 PF00891 O-methyltransferase domain NYE86_22030 PF16864 Dimerisation domain NYE86_22035 PF04072 Leucine carboxyl methyltransferase NYE86_22045 PF00486 Transcriptional regulatory protein, C terminal NYE86_22045 PF00072 Response regulator receiver domain NYE86_22050 PF00512 His Kinase A (phospho-acceptor) domain NYE86_22050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_22050 PF00672 HAMP domain NYE86_22055 PF02146 Sir2 family NYE86_22070 PF07745 Glycosyl hydrolase family 53 NYE86_22075 PF04616 Glycosyl hydrolases family 43 NYE86_22080 PF00089 Trypsin NYE86_22090 PF13472 GDSL-like Lipase/Acylhydrolase family NYE86_22105 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22110 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22120 PF00356 Bacterial regulatory proteins, lacI family NYE86_22130 PF07549 SecD/SecF GG Motif NYE86_22130 PF02355 Protein export membrane protein NYE86_22135 PF00440 Bacterial regulatory proteins, tetR family NYE86_22155 PF01447 Thermolysin metallopeptidase, catalytic domain NYE86_22155 PF04389 Peptidase family M28 NYE86_22155 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYE86_22210 PF00072 Response regulator receiver domain NYE86_22210 PF00196 Bacterial regulatory proteins, luxR family NYE86_22220 PF03176 MMPL family NYE86_22235 PF04545 Sigma-70, region 4 NYE86_22235 PF04542 Sigma-70 region 2 NYE86_22255 PF00350 Dynamin family NYE86_22260 PF00012 Hsp70 protein NYE86_22280 PF00350 Dynamin family NYE86_22300 PF00723 Glycosyl hydrolases family 15 NYE86_22315 PF01202 Shikimate kinase NYE86_22320 PF05199 GMC oxidoreductase NYE86_22320 PF00732 GMC oxidoreductase NYE86_22325 PF02322 Cytochrome bd terminal oxidase subunit II NYE86_22330 PF01654 Cytochrome bd terminal oxidase subunit I NYE86_22340 PF00005 ABC transporter NYE86_22355 PF04185 Phosphoesterase family NYE86_22355 PF05506 Domain of unknown function (DUF756) NYE86_22365 PF01544 CorA-like Mg2+ transporter protein NYE86_22375 PF00128 Alpha amylase, catalytic domain NYE86_22375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYE86_22385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NYE86_22390 PF07690 Major Facilitator Superfamily NYE86_22400 PF01022 Bacterial regulatory protein, arsR family NYE86_22405 PF00127 Copper binding proteins, plastocyanin/azurin family NYE86_22420 PF00005 ABC transporter NYE86_22425 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22435 PF00296 Luciferase-like monooxygenase NYE86_22440 PF00232 Glycosyl hydrolase family 1 NYE86_22445 PF00759 Glycosyl hydrolase family 9 NYE86_22445 PF02927 Cellulase N-terminal ig-like domain NYE86_22445 PF02018 Carbohydrate binding domain NYE86_22450 PF17678 Glycosyl hydrolase family 92 N-terminal domain NYE86_22450 PF07971 Glycosyl hydrolase family 92 NYE86_22490 PF01554 MatE NYE86_22495 PF14437 MafB19-like deaminase NYE86_22500 PF07691 PA14 domain NYE86_22500 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_22500 PF14310 Fibronectin type III-like domain NYE86_22500 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_22505 PF05199 GMC oxidoreductase NYE86_22505 PF00732 GMC oxidoreductase NYE86_22570 PF02585 GlcNAc-PI de-N-acetylase NYE86_22595 PF00005 ABC transporter NYE86_22610 PF04183 IucA / IucC family NYE86_22610 PF06276 Ferric iron reductase FhuF-like transporter NYE86_22620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NYE86_22620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NYE86_22630 PF13193 AMP-binding enzyme C-terminal domain NYE86_22630 PF00668 Condensation domain NYE86_22630 PF00550 Phosphopantetheine attachment site NYE86_22630 PF00501 AMP-binding enzyme NYE86_22635 PF01433 Peptidase family M1 domain NYE86_22635 PF11838 ERAP1-like C-terminal domain NYE86_22640 PF01380 SIS domain NYE86_22640 PF01418 Helix-turn-helix domain, rpiR family NYE86_22650 PF13580 SIS domain NYE86_22660 PF01263 Aldose 1-epimerase NYE86_22665 PF11762 L-arabinose isomerase C-terminal domain NYE86_22665 PF02610 L-arabinose isomerase NYE86_22670 PF00596 Class II Aldolase and Adducin N-terminal domain NYE86_22675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYE86_22675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYE86_22680 PF00356 Bacterial regulatory proteins, lacI family NYE86_22690 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NYE86_22690 PF04616 Glycosyl hydrolases family 43 NYE86_22700 PF00356 Bacterial regulatory proteins, lacI family NYE86_22720 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22725 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22730 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NYE86_22750 PF00356 Bacterial regulatory proteins, lacI family NYE86_22755 PF01547 Bacterial extracellular solute-binding protein NYE86_22760 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22765 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22775 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22775 PF00331 Glycosyl hydrolase family 10 NYE86_22780 PF00331 Glycosyl hydrolase family 10 NYE86_22780 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22790 PF01969 Protein of unknown function DUF111 NYE86_22795 PF00731 AIR carboxylase NYE86_22800 PF09861 Lactate racemase N-terminal domain NYE86_22805 PF00392 Bacterial regulatory proteins, gntR family NYE86_22805 PF07729 FCD domain NYE86_22810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_22810 PF13378 Enolase C-terminal domain-like NYE86_22815 PF13407 Periplasmic binding protein domain NYE86_22825 PF02653 Branched-chain amino acid transport system / permease component NYE86_22835 PF00331 Glycosyl hydrolase family 10 NYE86_22835 PF00553 Cellulose binding domain NYE86_22840 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22840 PF00331 Glycosyl hydrolase family 10 NYE86_22845 PF12695 Alpha/beta hydrolase family NYE86_22850 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_22850 PF00041 Fibronectin type III domain NYE86_22850 PF00553 Cellulose binding domain NYE86_22855 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22855 PF00331 Glycosyl hydrolase family 10 NYE86_22860 PF16499 Alpha galactosidase A NYE86_22860 PF17801 Alpha galactosidase C-terminal beta sandwich domain NYE86_22865 PF00294 pfkB family carbohydrate kinase NYE86_22880 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22885 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_22895 PF00248 Aldo/keto reductase family NYE86_22910 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_22910 PF00107 Zinc-binding dehydrogenase NYE86_22925 PF00331 Glycosyl hydrolase family 10 NYE86_22925 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22930 PF00331 Glycosyl hydrolase family 10 NYE86_22930 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22935 PF00331 Glycosyl hydrolase family 10 NYE86_22935 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22940 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_22940 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_22940 PF14310 Fibronectin type III-like domain NYE86_22945 PF02653 Branched-chain amino acid transport system / permease component NYE86_22950 PF02653 Branched-chain amino acid transport system / permease component NYE86_22955 PF00005 ABC transporter NYE86_22960 PF13407 Periplasmic binding protein domain NYE86_22965 PF03664 Glycosyl hydrolase family 62 NYE86_22965 PF00652 Ricin-type beta-trefoil lectin domain NYE86_22975 PF08031 Berberine and berberine like NYE86_22975 PF01565 FAD binding domain NYE86_22980 PF07690 Major Facilitator Superfamily NYE86_22990 PF07690 Major Facilitator Superfamily NYE86_22995 PF00698 Acyl transferase domain NYE86_23000 PF00550 Phosphopantetheine attachment site NYE86_23005 PF01648 4'-phosphopantetheinyl transferase superfamily NYE86_23010 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_23010 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_23015 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_23015 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_23020 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_23020 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_23025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NYE86_23025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NYE86_23030 PF01494 FAD binding domain NYE86_23050 PF00733 Asparagine synthase NYE86_23050 PF13537 Glutamine amidotransferase domain NYE86_23055 PF00264 Common central domain of tyrosinase NYE86_23060 PF06236 Tyrosinase co-factor MelC1 NYE86_23065 PF01959 3-dehydroquinate synthase II NYE86_23070 PF01791 DeoC/LacD family aldolase NYE86_23075 PF01842 ACT domain NYE86_23075 PF00696 Amino acid kinase family NYE86_23075 PF13840 ACT domain NYE86_23080 PF03704 Bacterial transcriptional activator domain NYE86_23080 PF00931 NB-ARC domain NYE86_23080 PF00486 Transcriptional regulatory protein, C terminal NYE86_23085 PF00294 pfkB family carbohydrate kinase NYE86_23090 PF13649 Methyltransferase domain NYE86_23095 PF00550 Phosphopantetheine attachment site NYE86_23100 PF07977 FabA-like domain NYE86_23105 PF00221 Aromatic amino acid lyase NYE86_23110 PF00501 AMP-binding enzyme NYE86_23110 PF13193 AMP-binding enzyme C-terminal domain NYE86_23130 PF00248 Aldo/keto reductase family NYE86_23150 PF05532 CsbD-like NYE86_23180 PF01638 HxlR-like helix-turn-helix NYE86_23185 PF00561 alpha/beta hydrolase fold NYE86_23190 PF00196 Bacterial regulatory proteins, luxR family NYE86_23215 PF00591 Glycosyl transferase family, a/b domain NYE86_23215 PF02885 Glycosyl transferase family, helical bundle domain NYE86_23230 PF00480 ROK family NYE86_23230 PF01325 Iron dependent repressor, N-terminal DNA binding domain NYE86_23240 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_23245 PF13193 AMP-binding enzyme C-terminal domain NYE86_23245 PF00501 AMP-binding enzyme NYE86_23250 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_23265 PF07690 Major Facilitator Superfamily NYE86_23270 PF01965 DJ-1/PfpI family NYE86_23270 PF12833 Helix-turn-helix domain NYE86_23285 PF01979 Amidohydrolase family NYE86_23305 PF00069 Protein kinase domain NYE86_23340 PF00196 Bacterial regulatory proteins, luxR family NYE86_23340 PF00072 Response regulator receiver domain NYE86_23350 PF05114 Protein of unknown function (DUF692) NYE86_23370 PF02811 PHP domain NYE86_23385 PF13649 Methyltransferase domain NYE86_23415 PF00069 Protein kinase domain NYE86_23415 PF03793 PASTA domain NYE86_23420 PF00404 Dockerin type I domain NYE86_23420 PF03422 Carbohydrate binding module (family 6) NYE86_23420 PF00756 Putative esterase NYE86_23420 PF00331 Glycosyl hydrolase family 10 NYE86_23430 PF00069 Protein kinase domain NYE86_23430 PF14032 PknH-like extracellular domain NYE86_23440 PF01209 ubiE/COQ5 methyltransferase family NYE86_23445 PF16123 Hydroxyacylglutathione hydrolase C-terminus NYE86_23445 PF00753 Metallo-beta-lactamase superfamily NYE86_23470 PF00082 Subtilase family NYE86_23470 PF02225 PA domain NYE86_23470 PF13860 FlgD Ig-like domain NYE86_23470 PF05922 Peptidase inhibitor I9 NYE86_23475 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding NYE86_23475 PF01565 FAD binding domain NYE86_23485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_23485 PF03466 LysR substrate binding domain NYE86_23500 PF08281 Sigma-70, region 4 NYE86_23500 PF04542 Sigma-70 region 2 NYE86_23545 PF16353 Domain of unknown function(DUF4981) NYE86_23545 PF02837 Glycosyl hydrolases family 2, sugar binding domain NYE86_23545 PF02929 Beta galactosidase small chain NYE86_23545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NYE86_23550 PF12706 Beta-lactamase superfamily domain NYE86_23560 PF07702 UTRA domain NYE86_23560 PF00392 Bacterial regulatory proteins, gntR family NYE86_23575 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_23580 PF00005 ABC transporter NYE86_23585 PF00890 FAD binding domain NYE86_23585 PF02910 Fumarate reductase flavoprotein C-term NYE86_23600 PF03435 Saccharopine dehydrogenase NADP binding domain NYE86_23630 PF13472 GDSL-like Lipase/Acylhydrolase family NYE86_23635 PF16874 Glycosyl hydrolase family 36 C-terminal domain NYE86_23635 PF16875 Glycosyl hydrolase family 36 N-terminal domain NYE86_23645 PF00202 Aminotransferase class-III NYE86_23650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NYE86_23650 PF02779 Transketolase, pyrimidine binding domain NYE86_23650 PF02780 Transketolase, C-terminal domain NYE86_23655 PF06463 Molybdenum Cofactor Synthesis C NYE86_23655 PF04055 Radical SAM superfamily NYE86_23665 PF13243 Squalene-hopene cyclase C-terminal domain NYE86_23665 PF13249 Squalene-hopene cyclase N-terminal domain NYE86_23670 PF00348 Polyprenyl synthetase NYE86_23675 PF01593 Flavin containing amine oxidoreductase NYE86_23690 PF00005 ABC transporter NYE86_23710 PF00465 Iron-containing alcohol dehydrogenase NYE86_23725 PF01545 Cation efflux family NYE86_23730 PF00293 NUDIX domain NYE86_23740 PF00378 Enoyl-CoA hydratase/isomerase NYE86_23755 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYE86_23755 PF01447 Thermolysin metallopeptidase, catalytic domain NYE86_23755 PF04389 Peptidase family M28 NYE86_23765 PF00005 ABC transporter NYE86_23765 PF16326 ABC transporter C-terminal domain NYE86_23765 PF12848 ABC transporter NYE86_23770 PF03405 Fatty acid desaturase NYE86_23780 PF01039 Carboxyl transferase domain NYE86_23785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYE86_23785 PF00364 Biotin-requiring enzyme NYE86_23785 PF00289 Biotin carboxylase, N-terminal domain NYE86_23785 PF02785 Biotin carboxylase C-terminal domain NYE86_23790 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_23790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_23790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_23795 PF00378 Enoyl-CoA hydratase/isomerase NYE86_23845 PF04227 Indigoidine synthase A like protein NYE86_23865 PF02153 Prephenate dehydrogenase NYE86_23865 PF01817 Chorismate mutase type II NYE86_23870 PF02634 FdhD/NarQ family NYE86_23875 PF03466 LysR substrate binding domain NYE86_23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_23880 PF00501 AMP-binding enzyme NYE86_23890 PF01580 FtsK/SpoIIIE family NYE86_23890 PF12538 DNA transporter NYE86_23900 PF00248 Aldo/keto reductase family NYE86_23905 PF01209 ubiE/COQ5 methyltransferase family NYE86_23910 PF02861 Clp amino terminal domain, pathogenicity island component NYE86_23915 PF00440 Bacterial regulatory proteins, tetR family NYE86_23940 PF12706 Beta-lactamase superfamily domain NYE86_23985 PF00023 Ankyrin repeat NYE86_23985 PF12796 Ankyrin repeats (3 copies) NYE86_23990 PF03561 Allantoicase repeat NYE86_23995 PF03466 LysR substrate binding domain NYE86_23995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_24000 PF12833 Helix-turn-helix domain NYE86_24000 PF12852 Cupin NYE86_24010 PF01808 AICARFT/IMPCHase bienzyme NYE86_24010 PF02142 MGS-like domain NYE86_24015 PF00378 Enoyl-CoA hydratase/isomerase NYE86_24095 PF00561 alpha/beta hydrolase fold NYE86_24110 PF00535 Glycosyl transferase family 2 NYE86_24115 PF00072 Response regulator receiver domain NYE86_24115 PF00486 Transcriptional regulatory protein, C terminal NYE86_24120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_24120 PF00512 His Kinase A (phospho-acceptor) domain NYE86_24120 PF00672 HAMP domain NYE86_24125 PF01370 NAD dependent epimerase/dehydratase family NYE86_24130 PF02016 LD-carboxypeptidase N-terminal domain NYE86_24130 PF17676 LD-carboxypeptidase C-terminal domain NYE86_24140 PF07687 Peptidase dimerisation domain NYE86_24140 PF01546 Peptidase family M20/M25/M40 NYE86_24145 PF04951 D-aminopeptidase NYE86_24150 PF08241 Methyltransferase domain NYE86_24155 PF13581 Histidine kinase-like ATPase domain NYE86_24155 PF08448 PAS fold NYE86_24155 PF13466 STAS domain NYE86_24155 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_24165 PF07690 Major Facilitator Superfamily NYE86_24180 PF04055 Radical SAM superfamily NYE86_24185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYE86_24185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYE86_24190 PF17754 MftR C-terminal domain NYE86_24190 PF00440 Bacterial regulatory proteins, tetR family NYE86_24195 PF00107 Zinc-binding dehydrogenase NYE86_24195 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_24200 PF02310 B12 binding domain NYE86_24200 PF01642 Methylmalonyl-CoA mutase NYE86_24210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_24210 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_24210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_24215 PF02666 Phosphatidylserine decarboxylase NYE86_24225 PF02595 Glycerate kinase family NYE86_24255 PF01979 Amidohydrolase family NYE86_24260 PF00202 Aminotransferase class-III NYE86_24295 PF00857 Isochorismatase family NYE86_24315 PF00456 Transketolase, thiamine diphosphate binding domain NYE86_24320 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_24325 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_24330 PF00497 Bacterial extracellular solute-binding proteins, family 3 NYE86_24335 PF00005 ABC transporter NYE86_24360 PF02627 Carboxymuconolactone decarboxylase family NYE86_24370 PF00480 ROK family NYE86_24375 PF00005 ABC transporter NYE86_24380 PF02653 Branched-chain amino acid transport system / permease component NYE86_24390 PF07702 UTRA domain NYE86_24390 PF00392 Bacterial regulatory proteins, gntR family NYE86_24395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_24395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_24405 PF00294 pfkB family carbohydrate kinase NYE86_24410 PF04962 KduI/IolB family NYE86_24415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYE86_24415 PF00205 Thiamine pyrophosphate enzyme, central domain NYE86_24415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYE86_24430 PF00857 Isochorismatase family NYE86_24460 PF13443 Cro/C1-type HTH DNA-binding domain NYE86_24470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NYE86_24485 PF00480 ROK family NYE86_24485 PF01325 Iron dependent repressor, N-terminal DNA binding domain NYE86_24495 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_24500 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_24505 PF00232 Glycosyl hydrolase family 1 NYE86_24510 PF01979 Amidohydrolase family NYE86_24515 PF01614 Bacterial transcriptional regulator NYE86_24515 PF09339 IclR helix-turn-helix domain NYE86_24540 PF01274 Malate synthase NYE86_24545 PF01979 Amidohydrolase family NYE86_24550 PF01014 Uricase NYE86_24555 PF00576 HIUase/Transthyretin family NYE86_24575 PF07687 Peptidase dimerisation domain NYE86_24575 PF01546 Peptidase family M20/M25/M40 NYE86_24600 PF00005 ABC transporter NYE86_24635 PF01261 Xylose isomerase-like TIM barrel NYE86_24640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NYE86_24640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYE86_24650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYE86_24650 PF00205 Thiamine pyrophosphate enzyme, central domain NYE86_24650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYE86_24655 PF13193 AMP-binding enzyme C-terminal domain NYE86_24655 PF00501 AMP-binding enzyme NYE86_24660 PF00501 AMP-binding enzyme NYE86_24660 PF13193 AMP-binding enzyme C-terminal domain NYE86_24670 PF01810 LysE type translocator NYE86_24675 PF07690 Major Facilitator Superfamily NYE86_24685 PF01494 FAD binding domain NYE86_24695 PF07702 UTRA domain NYE86_24695 PF00392 Bacterial regulatory proteins, gntR family NYE86_24700 PF01547 Bacterial extracellular solute-binding protein NYE86_24705 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_24710 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_24715 PF02838 Glycosyl hydrolase family 20, domain 2 NYE86_24715 PF00728 Glycosyl hydrolase family 20, catalytic domain NYE86_24720 PF00942 Cellulose binding domain NYE86_24720 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_24755 PF00860 Permease family NYE86_24760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NYE86_24760 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NYE86_24765 PF00111 2Fe-2S iron-sulfur cluster binding domain NYE86_24765 PF01799 [2Fe-2S] binding domain NYE86_24770 PF03450 CO dehydrogenase flavoprotein C-terminal domain NYE86_24770 PF00941 FAD binding domain in molybdopterin dehydrogenase NYE86_24775 PF17853 GGDEF-like domain NYE86_24775 PF13556 PucR C-terminal helix-turn-helix domain NYE86_24775 PF06018 CodY GAF-like domain NYE86_24785 PF00392 Bacterial regulatory proteins, gntR family NYE86_24785 PF07729 FCD domain NYE86_24810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYE86_24810 PF00205 Thiamine pyrophosphate enzyme, central domain NYE86_24810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYE86_24825 PF01183 Glycosyl hydrolases family 25 NYE86_24835 PF00356 Bacterial regulatory proteins, lacI family NYE86_24840 PF00005 ABC transporter NYE86_24850 PF07730 Histidine kinase NYE86_24855 PF00196 Bacterial regulatory proteins, luxR family NYE86_24855 PF00072 Response regulator receiver domain NYE86_24865 PF03193 RsgA GTPase NYE86_24880 PF07690 Major Facilitator Superfamily NYE86_24885 PF01638 HxlR-like helix-turn-helix NYE86_24890 PF07690 Major Facilitator Superfamily NYE86_24900 PF08241 Methyltransferase domain NYE86_24920 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_24920 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_24920 PF14310 Fibronectin type III-like domain NYE86_24930 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_24935 PF00005 ABC transporter NYE86_24935 PF03459 TOBE domain NYE86_24940 PF00652 Ricin-type beta-trefoil lectin domain NYE86_24940 PF02983 Alpha-lytic protease prodomain NYE86_24960 PF12833 Helix-turn-helix domain NYE86_24970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_24970 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_24970 PF18158 Adaptive response protein AidB N-terminal domain NYE86_24980 PF00583 Acetyltransferase (GNAT) family NYE86_24980 PF01047 MarR family NYE86_24985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NYE86_24985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NYE86_24995 PF01507 Phosphoadenosine phosphosulfate reductase family NYE86_25005 PF01507 Phosphoadenosine phosphosulfate reductase family NYE86_25010 PF00009 Elongation factor Tu GTP binding domain NYE86_25015 PF09084 NMT1/THI5 like NYE86_25020 PF00005 ABC transporter NYE86_25025 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_25035 PF03176 MMPL family NYE86_25040 PF04542 Sigma-70 region 2 NYE86_25040 PF08281 Sigma-70, region 4 NYE86_25040 PF12680 SnoaL-like domain NYE86_25055 PF07690 Major Facilitator Superfamily NYE86_25070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYE86_25070 PF00128 Alpha amylase, catalytic domain NYE86_25075 PF00128 Alpha amylase, catalytic domain NYE86_25080 PF03466 LysR substrate binding domain NYE86_25080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_25085 PF00106 short chain dehydrogenase NYE86_25095 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_25095 PF00107 Zinc-binding dehydrogenase NYE86_25100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_25100 PF03466 LysR substrate binding domain NYE86_25105 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_25105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_25110 PF11941 Domain of unknown function (DUF3459) NYE86_25110 PF00128 Alpha amylase, catalytic domain NYE86_25120 PF03976 Polyphosphate kinase 2 (PPK2) NYE86_25140 PF02875 Mur ligase family, glutamate ligase domain NYE86_25140 PF08245 Mur ligase middle domain NYE86_25140 PF01225 Mur ligase family, catalytic domain NYE86_25145 PF01641 SelR domain NYE86_25165 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_25165 PF00107 Zinc-binding dehydrogenase NYE86_25170 PF01638 HxlR-like helix-turn-helix NYE86_25175 PF06778 Chlorite dismutase NYE86_25180 PF01593 Flavin containing amine oxidoreductase NYE86_25195 PF01208 Uroporphyrinogen decarboxylase (URO-D) NYE86_25215 PF02803 Thiolase, C-terminal domain NYE86_25215 PF00108 Thiolase, N-terminal domain NYE86_25220 PF00378 Enoyl-CoA hydratase/isomerase NYE86_25220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYE86_25220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYE86_25240 PF02780 Transketolase, C-terminal domain NYE86_25240 PF02779 Transketolase, pyrimidine binding domain NYE86_25240 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NYE86_25245 PF02653 Branched-chain amino acid transport system / permease component NYE86_25250 PF00005 ABC transporter NYE86_25255 PF13407 Periplasmic binding protein domain NYE86_25260 PF01325 Iron dependent repressor, N-terminal DNA binding domain NYE86_25260 PF00480 ROK family NYE86_25265 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_25270 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_25275 PF01547 Bacterial extracellular solute-binding protein NYE86_25280 PF00330 Aconitase family (aconitate hydratase) NYE86_25280 PF00694 Aconitase C-terminal domain NYE86_25295 PF04072 Leucine carboxyl methyltransferase NYE86_25305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NYE86_25315 PF13649 Methyltransferase domain NYE86_25320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NYE86_25320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NYE86_25330 PF00149 Calcineurin-like phosphoesterase NYE86_25370 PF01116 Fructose-bisphosphate aldolase class-II NYE86_25375 PF13419 Haloacid dehalogenase-like hydrolase NYE86_25380 PF02734 DAK2 domain NYE86_25385 PF02733 Dak1 domain NYE86_25390 PF05958 tRNA (Uracil-5-)-methyltransferase NYE86_25390 PF01938 TRAM domain NYE86_25395 PF13520 Amino acid permease NYE86_25400 PF02080 TrkA-C domain NYE86_25400 PF02254 TrkA-N domain NYE86_25405 PF02080 TrkA-C domain NYE86_25405 PF02254 TrkA-N domain NYE86_25420 PF00072 Response regulator receiver domain NYE86_25420 PF00486 Transcriptional regulatory protein, C terminal NYE86_25430 PF02687 FtsX-like permease family NYE86_25430 PF12704 MacB-like periplasmic core domain NYE86_25430 PF00005 ABC transporter NYE86_25435 PF02687 FtsX-like permease family NYE86_25435 PF00005 ABC transporter NYE86_25435 PF12704 MacB-like periplasmic core domain NYE86_25455 PF00692 dUTPase NYE86_25480 PF00512 His Kinase A (phospho-acceptor) domain NYE86_25480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_25480 PF00672 HAMP domain NYE86_25485 PF00072 Response regulator receiver domain NYE86_25485 PF00486 Transcriptional regulatory protein, C terminal NYE86_25495 PF00459 Inositol monophosphatase family NYE86_25500 PF00762 Ferrochelatase NYE86_25510 PF04030 D-arabinono-1,4-lactone oxidase NYE86_25510 PF01565 FAD binding domain NYE86_25515 PF11268 Protein of unknown function (DUF3071) NYE86_25520 PF00581 Rhodanese-like domain NYE86_25530 PF01047 MarR family NYE86_25530 PF00480 ROK family NYE86_25535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_25535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_25545 PF07691 PA14 domain NYE86_25545 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_25545 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_25545 PF14310 Fibronectin type III-like domain NYE86_25550 PF01047 MarR family NYE86_25550 PF00480 ROK family NYE86_25565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_25565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_25575 PF13378 Enolase C-terminal domain-like NYE86_25575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NYE86_25580 PF01614 Bacterial transcriptional regulator NYE86_25580 PF09339 IclR helix-turn-helix domain NYE86_25590 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_25595 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_25600 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NYE86_25610 PF13229 Right handed beta helix region NYE86_25610 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) NYE86_25610 PF12708 Pectate lyase superfamily protein NYE86_25615 PF00265 Thymidine kinase NYE86_25630 PF00583 Acetyltransferase (GNAT) family NYE86_25630 PF13380 CoA binding domain NYE86_25630 PF13607 Succinyl-CoA ligase like flavodoxin domain NYE86_25635 PF00381 PTS HPr component phosphorylation site NYE86_25640 PF07729 FCD domain NYE86_25640 PF00392 Bacterial regulatory proteins, gntR family NYE86_25650 PF05193 Peptidase M16 inactive domain NYE86_25650 PF00675 Insulinase (Peptidase family M16) NYE86_25655 PF00521 DNA gyrase/topoisomerase IV, subunit A NYE86_25655 PF03989 DNA gyrase C-terminal domain, beta-propeller NYE86_25670 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_25675 PF00005 ABC transporter NYE86_25680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NYE86_25680 PF17203 Single cache domain 3 NYE86_25680 PF00989 PAS fold NYE86_25680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_25685 PF00072 Response regulator receiver domain NYE86_25685 PF12431 Transcriptional regulator NYE86_25685 PF08279 HTH domain NYE86_25690 PF00474 Sodium:solute symporter family NYE86_25700 PF00196 Bacterial regulatory proteins, luxR family NYE86_25700 PF00072 Response regulator receiver domain NYE86_25705 PF07730 Histidine kinase NYE86_25720 PF07728 AAA domain (dynein-related subfamily) NYE86_25730 PF05762 VWA domain containing CoxE-like protein NYE86_25735 PF04434 SWIM zinc finger NYE86_25740 PF14310 Fibronectin type III-like domain NYE86_25740 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_25740 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_25745 PF04029 2-phosphosulpholactate phosphatase NYE86_25750 PF08241 Methyltransferase domain NYE86_25795 PF00204 DNA gyrase B NYE86_25795 PF00986 DNA gyrase B subunit, carboxyl terminus NYE86_25795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_25795 PF01751 Toprim domain NYE86_25805 PF00089 Trypsin NYE86_25810 PF00140 Sigma-70 factor, region 1.2 NYE86_25810 PF04539 Sigma-70 region 3 NYE86_25810 PF04542 Sigma-70 region 2 NYE86_25810 PF04545 Sigma-70, region 4 NYE86_25815 PF07729 FCD domain NYE86_25815 PF00392 Bacterial regulatory proteins, gntR family NYE86_25820 PF00005 ABC transporter NYE86_25820 PF08402 TOBE domain NYE86_25835 PF00561 alpha/beta hydrolase fold NYE86_25875 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_25875 PF16450 Proteasomal ATPase OB C-terminal domain NYE86_25875 PF17758 Proteasomal ATPase OB N-terminal domain NYE86_25945 PF09382 RQC domain NYE86_25945 PF16124 RecQ zinc-binding NYE86_25945 PF00270 DEAD/DEAH box helicase NYE86_25945 PF00271 Helicase conserved C-terminal domain NYE86_25945 PF00570 HRDC domain NYE86_25960 PF01351 Ribonuclease HII NYE86_25970 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_25990 PF08471 Class II vitamin B12-dependent ribonucleotide reductase NYE86_25990 PF02867 Ribonucleotide reductase, barrel domain NYE86_25995 PF03477 ATP cone domain NYE86_26000 PF01726 LexA DNA binding domain NYE86_26000 PF00717 Peptidase S24-like NYE86_26005 PF13307 Helicase C-terminal domain NYE86_26015 PF00069 Protein kinase domain NYE86_26015 PF03793 PASTA domain NYE86_26025 PF06276 Ferric iron reductase FhuF-like transporter NYE86_26025 PF04183 IucA / IucC family NYE86_26035 PF06276 Ferric iron reductase FhuF-like transporter NYE86_26035 PF04183 IucA / IucC family NYE86_26040 PF00202 Aminotransferase class-III NYE86_26050 PF13167 GTP-binding GTPase N-terminal NYE86_26050 PF16360 GTP-binding GTPase Middle Region NYE86_26050 PF01926 50S ribosome-binding GTPase NYE86_26055 PF13291 ACT domain NYE86_26055 PF04607 Region found in RelA / SpoT proteins NYE86_26055 PF02824 TGS domain NYE86_26060 PF01678 Diaminopimelate epimerase NYE86_26085 PF04055 Radical SAM superfamily NYE86_26085 PF00919 Uncharacterized protein family UPF0004 NYE86_26095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_26095 PF00512 His Kinase A (phospho-acceptor) domain NYE86_26095 PF00672 HAMP domain NYE86_26100 PF00072 Response regulator receiver domain NYE86_26100 PF00486 Transcriptional regulatory protein, C terminal NYE86_26105 PF01494 FAD binding domain NYE86_26110 PF02631 RecX family NYE86_26115 PF00154 recA bacterial DNA recombination protein NYE86_26145 PF00270 DEAD/DEAH box helicase NYE86_26145 PF00271 Helicase conserved C-terminal domain NYE86_26145 PF08494 DEAD/H associated NYE86_26150 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NYE86_26150 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NYE86_26160 PF00210 Ferritin-like domain NYE86_26170 PF02464 Competence-damaged protein NYE86_26170 PF18146 Damage-inducible protein CinA KH domain NYE86_26170 PF00994 Probable molybdopterin binding domain NYE86_26175 PF01066 CDP-alcohol phosphatidyltransferase NYE86_26180 PF18693 TRAM domain NYE86_26180 PF04055 Radical SAM superfamily NYE86_26180 PF00919 Uncharacterized protein family UPF0004 NYE86_26190 PF17854 FtsK alpha domain NYE86_26190 PF09397 Ftsk gamma domain NYE86_26190 PF01580 FtsK/SpoIIIE family NYE86_26195 PF00072 Response regulator receiver domain NYE86_26200 PF09308 LuxQ, periplasmic NYE86_26200 PF00512 His Kinase A (phospho-acceptor) domain NYE86_26200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_26200 PF00072 Response regulator receiver domain NYE86_26205 PF00672 HAMP domain NYE86_26205 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_26215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYE86_26235 PF17770 Ribonuclease J C-terminal domain NYE86_26235 PF12706 Beta-lactamase superfamily domain NYE86_26235 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NYE86_26240 PF00701 Dihydrodipicolinate synthetase family NYE86_26245 PF02511 Thymidylate synthase complementing protein NYE86_26260 PF05173 Dihydrodipicolinate reductase, C-terminus NYE86_26260 PF01113 Dihydrodipicolinate reductase, N-terminus NYE86_26265 PF00675 Insulinase (Peptidase family M16) NYE86_26265 PF05193 Peptidase M16 inactive domain NYE86_26270 PF00575 S1 RNA binding domain NYE86_26270 PF00013 KH domain NYE86_26270 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NYE86_26270 PF01138 3' exoribonuclease family, domain 1 NYE86_26275 PF00312 Ribosomal protein S15 NYE86_26285 PF01580 FtsK/SpoIIIE family NYE86_26325 PF00082 Subtilase family NYE86_26325 PF05922 Peptidase inhibitor I9 NYE86_26340 PF00082 Subtilase family NYE86_26355 PF05108 Type VII secretion system ESX-1, transport TM domain B NYE86_26375 PF00005 ABC transporter NYE86_26385 PF07730 Histidine kinase NYE86_26390 PF00196 Bacterial regulatory proteins, luxR family NYE86_26390 PF00072 Response regulator receiver domain NYE86_26395 PF01687 Riboflavin kinase NYE86_26395 PF06574 FAD synthetase NYE86_26405 PF16198 tRNA pseudouridylate synthase B C-terminal domain NYE86_26405 PF09142 tRNA Pseudouridine synthase II, C terminal NYE86_26405 PF01509 TruB family pseudouridylate synthase (N terminal domain) NYE86_26410 PF02033 Ribosome-binding factor A NYE86_26430 PF13184 NusA-like KH domain NYE86_26430 PF08529 NusA N-terminal domain NYE86_26435 PF02576 RimP N-terminal domain NYE86_26435 PF17384 RimP C-terminal SH3 domain NYE86_26450 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NYE86_26455 PF00583 Acetyltransferase (GNAT) family NYE86_26455 PF13673 Acetyltransferase (GNAT) domain NYE86_26465 PF04551 GcpE protein NYE86_26470 PF02163 Peptidase family M50 NYE86_26470 PF17820 PDZ domain NYE86_26475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NYE86_26475 PF13288 DXP reductoisomerase C-terminal domain NYE86_26475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NYE86_26480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NYE86_26480 PF02770 Acyl-CoA dehydrogenase, middle domain NYE86_26480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NYE86_26485 PF00171 Aldehyde dehydrogenase family NYE86_26495 PF07905 Purine catabolism regulatory protein-like family NYE86_26495 PF17853 GGDEF-like domain NYE86_26495 PF13556 PucR C-terminal helix-turn-helix domain NYE86_26505 PF00202 Aminotransferase class-III NYE86_26515 PF00171 Aldehyde dehydrogenase family NYE86_26525 PF01266 FAD dependent oxidoreductase NYE86_26530 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_26535 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_26540 PF08402 TOBE domain NYE86_26540 PF00005 ABC transporter NYE86_26545 PF13416 Bacterial extracellular solute-binding protein NYE86_26550 PF00962 Adenosine/AMP deaminase NYE86_26560 PF00171 Aldehyde dehydrogenase family NYE86_26570 PF00202 Aminotransferase class-III NYE86_26575 PF00005 ABC transporter NYE86_26595 PF00005 ABC transporter NYE86_26595 PF08402 TOBE domain NYE86_26600 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_26610 PF04055 Radical SAM superfamily NYE86_26620 PF01765 Ribosome recycling factor NYE86_26625 PF00696 Amino acid kinase family NYE86_26630 PF00889 Elongation factor TS NYE86_26635 PF00318 Ribosomal protein S2 NYE86_26650 PF04539 Sigma-70 region 3 NYE86_26650 PF04542 Sigma-70 region 2 NYE86_26650 PF04545 Sigma-70, region 4 NYE86_26665 PF02899 Phage integrase, N-terminal SAM-like domain NYE86_26665 PF00589 Phage integrase family NYE86_26680 PF02481 DNA recombination-mediator protein A NYE86_26680 PF17782 DprA winged helix domain NYE86_26685 PF01078 Magnesium chelatase, subunit ChlI NYE86_26685 PF13335 Magnesium chelatase, subunit ChlI C-terminal NYE86_26715 PF03880 DbpA RNA binding domain NYE86_26715 PF00270 DEAD/DEAH box helicase NYE86_26715 PF00271 Helicase conserved C-terminal domain NYE86_26760 PF00580 UvrD/REP helicase N-terminal domain NYE86_26760 PF13361 UvrD-like helicase C-terminal domain NYE86_26785 PF13936 Helix-turn-helix domain NYE86_26785 PF00665 Integrase core domain NYE86_26805 PF02021 Uncharacterised protein family UPF0102 NYE86_26810 PF10611 Protein of unknown function (DUF2469) NYE86_26815 PF10502 Signal peptidase, peptidase S26 NYE86_26820 PF10502 Signal peptidase, peptidase S26 NYE86_26825 PF10502 Signal peptidase, peptidase S26 NYE86_26830 PF10502 Signal peptidase, peptidase S26 NYE86_26835 PF01245 Ribosomal protein L19 NYE86_26840 PF01746 tRNA (Guanine-1)-methyltransferase NYE86_26845 PF05239 PRC-barrel domain NYE86_26845 PF01782 RimM N-terminal domain NYE86_26855 PF00886 Ribosomal protein S16 NYE86_26865 PF03129 Anticodon binding domain NYE86_26865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYE86_26880 PF13302 Acetyltransferase (GNAT) domain NYE86_26885 PF00448 SRP54-type protein, GTPase domain NYE86_26885 PF02881 SRP54-type protein, helical bundle domain NYE86_26885 PF02978 Signal peptide binding domain NYE86_26890 PF08335 GlnD PII-uridylyltransferase NYE86_26890 PF01909 Nucleotidyltransferase domain NYE86_26890 PF01966 HD domain NYE86_26895 PF00543 Nitrogen regulatory protein P-II NYE86_26900 PF00909 Ammonium Transporter Family NYE86_26915 PF02881 SRP54-type protein, helical bundle domain NYE86_26915 PF00448 SRP54-type protein, GTPase domain NYE86_26920 PF00083 Sugar (and other) transporter NYE86_26935 PF00708 Acylphosphatase NYE86_26940 PF00188 Cysteine-rich secretory protein family NYE86_26945 PF01638 HxlR-like helix-turn-helix NYE86_26950 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NYE86_26950 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NYE86_26955 PF00035 Double-stranded RNA binding motif NYE86_26955 PF14622 Ribonuclease-III-like NYE86_26960 PF01783 Ribosomal L32p protein family NYE86_26965 PF02620 Large ribosomal RNA subunit accumulation protein YceD NYE86_26975 PF01467 Cytidylyltransferase-like NYE86_26995 PF00270 DEAD/DEAH box helicase NYE86_26995 PF00271 Helicase conserved C-terminal domain NYE86_26995 PF17191 RecG wedge domain NYE86_27000 PF13684 Dihydroxyacetone kinase family NYE86_27000 PF02734 DAK2 domain NYE86_27005 PF00830 Ribosomal L28 family NYE86_27010 PF08543 Phosphomethylpyrimidine kinase NYE86_27015 PF02769 AIR synthase related protein, C-terminal domain NYE86_27015 PF00586 AIR synthase related protein, N-terminal domain NYE86_27030 PF07478 D-ala D-ala ligase C-terminus NYE86_27030 PF01820 D-ala D-ala ligase N-terminus NYE86_27035 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NYE86_27035 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NYE86_27045 PF01983 Guanylyl transferase CofC like NYE86_27055 PF00216 Bacterial DNA-binding protein NYE86_27065 PF00694 Aconitase C-terminal domain NYE86_27070 PF00330 Aconitase family (aconitate hydratase) NYE86_27075 PF01614 Bacterial transcriptional regulator NYE86_27075 PF09339 IclR helix-turn-helix domain NYE86_27095 PF00749 tRNA synthetases class I (E and Q), catalytic domain NYE86_27100 PF01557 Fumarylacetoacetate (FAA) hydrolase family NYE86_27115 PF03259 Roadblock/LC7 domain NYE86_27135 PF03259 Roadblock/LC7 domain NYE86_27155 PF01039 Carboxyl transferase domain NYE86_27160 PF03328 HpcH/HpaI aldolase/citrate lyase family NYE86_27165 PF03328 HpcH/HpaI aldolase/citrate lyase family NYE86_27205 PF00682 HMGL-like NYE86_27205 PF08502 LeuA allosteric (dimerisation) domain NYE86_27210 PF01063 Amino-transferase class IV NYE86_27215 PF00180 Isocitrate/isopropylmalate dehydrogenase NYE86_27220 PF00171 Aldehyde dehydrogenase family NYE86_27225 PF01619 Proline dehydrogenase NYE86_27230 PF13556 PucR C-terminal helix-turn-helix domain NYE86_27235 PF01842 ACT domain NYE86_27235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYE86_27235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NYE86_27240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NYE86_27240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NYE86_27245 PF10369 Small subunit of acetolactate synthase NYE86_27250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NYE86_27250 PF00205 Thiamine pyrophosphate enzyme, central domain NYE86_27250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYE86_27255 PF00563 EAL domain NYE86_27255 PF03707 Bacterial signalling protein N terminal repeat NYE86_27255 PF00990 Diguanylate cyclase, GGDEF domain NYE86_27260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYE86_27265 PF00248 Aldo/keto reductase family NYE86_27270 PF07995 Glucose / Sorbosone dehydrogenase NYE86_27275 PF00072 Response regulator receiver domain NYE86_27275 PF00196 Bacterial regulatory proteins, luxR family NYE86_27295 PF03176 MMPL family NYE86_27300 PF02637 GatB domain NYE86_27300 PF02934 GatB/GatE catalytic domain NYE86_27310 PF01425 Amidase NYE86_27315 PF02686 Glu-tRNAGln amidotransferase C subunit NYE86_27320 PF00990 Diguanylate cyclase, GGDEF domain NYE86_27320 PF03707 Bacterial signalling protein N terminal repeat NYE86_27320 PF00563 EAL domain NYE86_27325 PF03120 NAD-dependent DNA ligase OB-fold domain NYE86_27325 PF01653 NAD-dependent DNA ligase adenylation domain NYE86_27325 PF00533 BRCA1 C Terminus (BRCT) domain NYE86_27325 PF12826 Helix-hairpin-helix motif NYE86_27325 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NYE86_27340 PF03641 Possible lysine decarboxylase NYE86_27355 PF00266 Aminotransferase class-V NYE86_27375 PF01571 Aminomethyltransferase folate-binding domain NYE86_27375 PF08669 Glycine cleavage T-protein C-terminal barrel domain NYE86_27380 PF01597 Glycine cleavage H-protein NYE86_27385 PF00464 Serine hydroxymethyltransferase NYE86_27390 PF03315 Serine dehydratase beta chain NYE86_27390 PF03313 Serine dehydratase alpha chain NYE86_27395 PF00296 Luciferase-like monooxygenase NYE86_27415 PF08281 Sigma-70, region 4 NYE86_27415 PF04542 Sigma-70 region 2 NYE86_27440 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_27440 PF14310 Fibronectin type III-like domain NYE86_27440 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_27445 PF07690 Major Facilitator Superfamily NYE86_27465 PF08990 Erythronolide synthase docking NYE86_27465 PF00698 Acyl transferase domain NYE86_27465 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_27465 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_27465 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_27465 PF08659 KR domain NYE86_27465 PF00550 Phosphopantetheine attachment site NYE86_27465 PF14765 Polyketide synthase dehydratase NYE86_27465 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_27480 PF00378 Enoyl-CoA hydratase/isomerase NYE86_27490 PF00561 alpha/beta hydrolase fold NYE86_27515 PF17964 Bacterial Ig domain NYE86_27515 PF03734 L,D-transpeptidase catalytic domain NYE86_27520 PF00128 Alpha amylase, catalytic domain NYE86_27520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYE86_27535 PF00005 ABC transporter NYE86_27535 PF00664 ABC transporter transmembrane region NYE86_27540 PF00005 ABC transporter NYE86_27540 PF00664 ABC transporter transmembrane region NYE86_27550 PF07504 Fungalysin/Thermolysin Propeptide Motif NYE86_27550 PF01483 Proprotein convertase P-domain NYE86_27550 PF02868 Thermolysin metallopeptidase, alpha-helical domain NYE86_27550 PF01447 Thermolysin metallopeptidase, catalytic domain NYE86_27555 PF00313 'Cold-shock' DNA-binding domain NYE86_27560 PF00271 Helicase conserved C-terminal domain NYE86_27560 PF00270 DEAD/DEAH box helicase NYE86_27565 PF11897 Protein of unknown function (DUF3417) NYE86_27565 PF00343 Carbohydrate phosphorylase NYE86_27570 PF11896 Domain of unknown function (DUF3416) NYE86_27575 PF16657 Maltogenic Amylase, C-terminal domain NYE86_27575 PF00128 Alpha amylase, catalytic domain NYE86_27580 PF18085 Maltokinase N-terminal cap domain NYE86_27580 PF01636 Phosphotransferase enzyme family NYE86_27585 PF00128 Alpha amylase, catalytic domain NYE86_27585 PF02806 Alpha amylase, C-terminal all-beta domain NYE86_27585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NYE86_27590 PF00365 Phosphofructokinase NYE86_27595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NYE86_27595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYE86_27600 PF07085 DRTGG domain NYE86_27600 PF01515 Phosphate acetyl/butaryl transferase NYE86_27605 PF00871 Acetokinase family NYE86_27610 PF00224 Pyruvate kinase, barrel domain NYE86_27610 PF02887 Pyruvate kinase, alpha/beta domain NYE86_27630 PF00085 Thioredoxin NYE86_27635 PF00440 Bacterial regulatory proteins, tetR family NYE86_27635 PF16859 Tetracyclin repressor-like, C-terminal domain NYE86_27645 PF02310 B12 binding domain NYE86_27645 PF01642 Methylmalonyl-CoA mutase NYE86_27650 PF12823 Domain of unknown function (DUF3817) NYE86_27660 PF03734 L,D-transpeptidase catalytic domain NYE86_27660 PF17964 Bacterial Ig domain NYE86_27670 PF08281 Sigma-70, region 4 NYE86_27670 PF04542 Sigma-70 region 2 NYE86_27695 PF09900 Predicted membrane protein (DUF2127) NYE86_27705 PF01910 Thiamine-binding protein NYE86_27725 PF03023 Lipid II flippase MurJ NYE86_27730 PF03551 Transcriptional regulator PadR-like family NYE86_27730 PF10400 Virulence activator alpha C-term NYE86_27750 PF04978 Protein of unknown function (DUF664) NYE86_27760 PF02803 Thiolase, C-terminal domain NYE86_27760 PF00108 Thiolase, N-terminal domain NYE86_27780 PF00005 ABC transporter NYE86_27795 PF00296 Luciferase-like monooxygenase NYE86_27805 PF01939 Endonuclease NucS NYE86_27810 PF00457 Glycosyl hydrolases family 11 NYE86_27825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NYE86_27825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NYE86_27830 PF01923 Cobalamin adenosyltransferase NYE86_27840 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NYE86_27845 PF02874 ATP synthase alpha/beta family, beta-barrel domain NYE86_27845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NYE86_27850 PF00231 ATP synthase NYE86_27855 PF02874 ATP synthase alpha/beta family, beta-barrel domain NYE86_27855 PF00306 ATP synthase alpha/beta chain, C terminal domain NYE86_27855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NYE86_27860 PF00213 ATP synthase delta (OSCP) subunit NYE86_27865 PF00430 ATP synthase B/B' CF(0) NYE86_27870 PF00137 ATP synthase subunit C NYE86_27875 PF00119 ATP synthase A chain NYE86_27885 PF00953 Glycosyl transferase family 4 NYE86_27890 PF01451 Low molecular weight phosphotyrosine protein phosphatase NYE86_27895 PF01300 Telomere recombination NYE86_27900 PF13649 Methyltransferase domain NYE86_27900 PF17827 PrmC N-terminal domain NYE86_27905 PF03462 PCRF domain NYE86_27905 PF00472 RF-1 domain NYE86_27910 PF01197 Ribosomal protein L31 NYE86_27915 PF03816 Cell envelope-related transcriptional attenuator domain NYE86_27920 PF00089 Trypsin NYE86_27930 PF00288 GHMP kinases N terminal domain NYE86_27930 PF08544 GHMP kinases C terminal NYE86_27935 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_27940 PF03447 Homoserine dehydrogenase, NAD binding domain NYE86_27940 PF01842 ACT domain NYE86_27940 PF00742 Homoserine dehydrogenase NYE86_27945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NYE86_27945 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NYE86_27950 PF05746 DALR anticodon binding domain NYE86_27950 PF00750 tRNA synthetases class I (R) NYE86_27950 PF03485 Arginyl tRNA synthetase N terminal domain NYE86_27970 PF04127 DNA / pantothenate metabolism flavoprotein NYE86_27970 PF02441 Flavoprotein NYE86_28065 PF01638 HxlR-like helix-turn-helix NYE86_28075 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_28075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_28080 PF01638 HxlR-like helix-turn-helix NYE86_28085 PF07690 Major Facilitator Superfamily NYE86_28095 PF17678 Glycosyl hydrolase family 92 N-terminal domain NYE86_28095 PF07971 Glycosyl hydrolase family 92 NYE86_28110 PF16864 Dimerisation domain NYE86_28110 PF00891 O-methyltransferase domain NYE86_28115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NYE86_28120 PF02797 Chalcone and stilbene synthases, C-terminal domain NYE86_28120 PF00195 Chalcone and stilbene synthases, N-terminal domain NYE86_28125 PF02401 LytB protein NYE86_28130 PF04551 GcpE protein NYE86_28135 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase NYE86_28180 PF07690 Major Facilitator Superfamily NYE86_28185 PF01494 FAD binding domain NYE86_28190 PF00486 Transcriptional regulatory protein, C terminal NYE86_28190 PF00931 NB-ARC domain NYE86_28190 PF03704 Bacterial transcriptional activator domain NYE86_28200 PF02780 Transketolase, C-terminal domain NYE86_28200 PF02779 Transketolase, pyrimidine binding domain NYE86_28200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NYE86_28205 PF11468 Aromatic prenyltransferase Orf2 NYE86_28215 PF00535 Glycosyl transferase family 2 NYE86_28230 PF04545 Sigma-70, region 4 NYE86_28230 PF04542 Sigma-70 region 2 NYE86_28240 PF04542 Sigma-70 region 2 NYE86_28240 PF08281 Sigma-70, region 4 NYE86_28245 PF01011 PQQ enzyme repeat NYE86_28245 PF13360 PQQ-like domain NYE86_28245 PF13570 PQQ-like domain NYE86_28245 PF00069 Protein kinase domain NYE86_28265 PF01522 Polysaccharide deacetylase NYE86_28275 PF03425 Carbohydrate binding domain (family 11) NYE86_28275 PF00150 Cellulase (glycosyl hydrolase family 5) NYE86_28275 PF00404 Dockerin type I domain NYE86_28275 PF02156 Glycosyl hydrolase family 26 NYE86_28285 PF00553 Cellulose binding domain NYE86_28285 PF00704 Glycosyl hydrolases family 18 NYE86_28285 PF00041 Fibronectin type III domain NYE86_28295 PF02653 Branched-chain amino acid transport system / permease component NYE86_28300 PF00005 ABC transporter NYE86_28310 PF00459 Inositol monophosphatase family NYE86_28330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NYE86_28330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NYE86_28335 PF00202 Aminotransferase class-III NYE86_28340 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NYE86_28340 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NYE86_28345 PF01266 FAD dependent oxidoreductase NYE86_28345 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NYE86_28370 PF04073 Aminoacyl-tRNA editing domain NYE86_28385 PF02610 L-arabinose isomerase NYE86_28385 PF11762 L-arabinose isomerase C-terminal domain NYE86_28390 PF00596 Class II Aldolase and Adducin N-terminal domain NYE86_28395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYE86_28395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYE86_28400 PF00356 Bacterial regulatory proteins, lacI family NYE86_28410 PF12399 Branched-chain amino acid ATP-binding cassette transporter NYE86_28410 PF00005 ABC transporter NYE86_28415 PF00005 ABC transporter NYE86_28425 PF02653 Branched-chain amino acid transport system / permease component NYE86_28430 PF02653 Branched-chain amino acid transport system / permease component NYE86_28440 PF03704 Bacterial transcriptional activator domain NYE86_28440 PF00931 NB-ARC domain NYE86_28440 PF00486 Transcriptional regulatory protein, C terminal NYE86_28505 PF17754 MftR C-terminal domain NYE86_28505 PF00440 Bacterial regulatory proteins, tetR family NYE86_28515 PF07690 Major Facilitator Superfamily NYE86_28525 PF00440 Bacterial regulatory proteins, tetR family NYE86_28525 PF13305 Tetracyclin repressor-like, C-terminal domain NYE86_28575 PF04978 Protein of unknown function (DUF664) NYE86_28580 PF01638 HxlR-like helix-turn-helix NYE86_28590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NYE86_28590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NYE86_28595 PF00196 Bacterial regulatory proteins, luxR family NYE86_28610 PF00255 Glutathione peroxidase NYE86_28620 PF01098 Cell cycle protein NYE86_28625 PF00905 Penicillin binding protein transpeptidase domain NYE86_28630 PF01522 Polysaccharide deacetylase NYE86_28635 PF09587 Bacterial capsule synthesis protein PGA_cap NYE86_28645 PF11583 P-aminobenzoate N-oxygenase AurF NYE86_28650 PF00440 Bacterial regulatory proteins, tetR family NYE86_28660 PF02018 Carbohydrate binding domain NYE86_28660 PF00041 Fibronectin type III domain NYE86_28660 PF00704 Glycosyl hydrolases family 18 NYE86_28675 PF00877 NlpC/P60 family NYE86_28720 PF01183 Glycosyl hydrolases family 25 NYE86_28725 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_28725 PF05362 Lon protease (S16) C-terminal proteolytic domain NYE86_28725 PF02190 ATP-dependent protease La (LON) substrate-binding domain NYE86_28745 PF00072 Response regulator receiver domain NYE86_28745 PF00486 Transcriptional regulatory protein, C terminal NYE86_28750 PF00672 HAMP domain NYE86_28750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_28750 PF00512 His Kinase A (phospho-acceptor) domain NYE86_28790 PF05491 RuvB C-terminal winged helix domain NYE86_28790 PF17864 RuvB AAA lid domain NYE86_28790 PF05496 Holliday junction DNA helicase RuvB P-loop domain NYE86_28815 PF00107 Zinc-binding dehydrogenase NYE86_28815 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_28820 PF09055 Nickel-containing superoxide dismutase NYE86_28825 PF10502 Signal peptidase, peptidase S26 NYE86_28835 PF00005 ABC transporter NYE86_28840 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_28850 PF00390 Malic enzyme, N-terminal domain NYE86_28850 PF03949 Malic enzyme, NAD binding domain NYE86_28855 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_28855 PF00085 Thioredoxin NYE86_28860 PF13411 MerR HTH family regulatory protein NYE86_28880 PF01418 Helix-turn-helix domain, rpiR family NYE86_28880 PF01380 SIS domain NYE86_28885 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_28890 PF13581 Histidine kinase-like ATPase domain NYE86_28895 PF04545 Sigma-70, region 4 NYE86_28895 PF04539 Sigma-70 region 3 NYE86_28895 PF04542 Sigma-70 region 2 NYE86_28905 PF00781 Diacylglycerol kinase catalytic domain NYE86_28910 PF02467 Transcription factor WhiB NYE86_28915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_28915 PF12282 Signal transduction histidine kinase NYE86_28915 PF07568 Histidine kinase NYE86_28920 PF01380 SIS domain NYE86_28930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NYE86_28935 PF00474 Sodium:solute symporter family NYE86_28945 PF00392 Bacterial regulatory proteins, gntR family NYE86_28945 PF07702 UTRA domain NYE86_28950 PF01547 Bacterial extracellular solute-binding protein NYE86_28955 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_28960 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_28965 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_28965 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_28970 PF01965 DJ-1/PfpI family NYE86_28980 PF00317 Ribonucleotide reductase, all-alpha domain NYE86_28980 PF03477 ATP cone domain NYE86_28980 PF02867 Ribonucleotide reductase, barrel domain NYE86_28985 PF00268 Ribonucleotide reductase, small chain NYE86_28990 PF01327 Polypeptide deformylase NYE86_29005 PF13490 Putative zinc-finger NYE86_29010 PF08281 Sigma-70, region 4 NYE86_29010 PF04542 Sigma-70 region 2 NYE86_29020 PF02586 SOS response associated peptidase (SRAP) NYE86_29030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NYE86_29035 PF03193 RsgA GTPase NYE86_29040 PF00893 Small Multidrug Resistance protein NYE86_29050 PF00459 Inositol monophosphatase family NYE86_29060 PF06628 Catalase-related immune-responsive NYE86_29060 PF00199 Catalase NYE86_29095 PF03699 Uncharacterised protein family (UPF0182) NYE86_29115 PF02391 MoaE protein NYE86_29170 PF02467 Transcription factor WhiB NYE86_29170 PF02178 AT hook motif NYE86_29180 PF00570 HRDC domain NYE86_29180 PF00580 UvrD/REP helicase N-terminal domain NYE86_29180 PF13361 UvrD-like helicase C-terminal domain NYE86_29185 PF00462 Glutaredoxin NYE86_29190 PF00293 NUDIX domain NYE86_29190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NYE86_29190 PF09297 NADH pyrophosphatase zinc ribbon domain NYE86_29195 PF13361 UvrD-like helicase C-terminal domain NYE86_29195 PF00580 UvrD/REP helicase N-terminal domain NYE86_29205 PF13361 UvrD-like helicase C-terminal domain NYE86_29205 PF00580 UvrD/REP helicase N-terminal domain NYE86_29210 PF13361 UvrD-like helicase C-terminal domain NYE86_29210 PF00580 UvrD/REP helicase N-terminal domain NYE86_29240 PF00899 ThiF family NYE86_29240 PF00581 Rhodanese-like domain NYE86_29300 PF00271 Helicase conserved C-terminal domain NYE86_29300 PF00270 DEAD/DEAH box helicase NYE86_29315 PF01914 MarC family integral membrane protein NYE86_29330 PF07690 Major Facilitator Superfamily NYE86_29340 PF01544 CorA-like Mg2+ transporter protein NYE86_29370 PF01883 Iron-sulfur cluster assembly protein NYE86_29370 PF10609 NUBPL iron-transfer P-loop NTPase NYE86_29380 PF02416 mttA/Hcf106 family NYE86_29390 PF08281 Sigma-70, region 4 NYE86_29390 PF04542 Sigma-70 region 2 NYE86_29395 PF01596 O-methyltransferase NYE86_29405 PF00378 Enoyl-CoA hydratase/isomerase NYE86_29410 PF13673 Acetyltransferase (GNAT) domain NYE86_29410 PF13302 Acetyltransferase (GNAT) domain NYE86_29410 PF03352 Methyladenine glycosylase NYE86_29410 PF00958 GMP synthase C terminal domain NYE86_29410 PF00117 Glutamine amidotransferase class-I NYE86_29420 PF00809 Pterin binding enzyme NYE86_29425 PF03641 Possible lysine decarboxylase NYE86_29435 PF01546 Peptidase family M20/M25/M40 NYE86_29435 PF07687 Peptidase dimerisation domain NYE86_29450 PF00155 Aminotransferase class I and II NYE86_29455 PF00037 4Fe-4S binding domain NYE86_29460 PF00583 Acetyltransferase (GNAT) family NYE86_29465 PF13369 Transglutaminase-like superfamily NYE86_29485 PF00072 Response regulator receiver domain NYE86_29485 PF00196 Bacterial regulatory proteins, luxR family NYE86_29505 PF00005 ABC transporter NYE86_29515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_29515 PF07730 Histidine kinase NYE86_29530 PF02585 GlcNAc-PI de-N-acetylase NYE86_29540 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NYE86_29540 PF00326 Prolyl oligopeptidase family NYE86_29545 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_29545 PF12911 N-terminal TM domain of oligopeptide transport permease C NYE86_29550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYE86_29555 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_29560 PF00005 ABC transporter NYE86_29560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_29565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_29565 PF00005 ABC transporter NYE86_29570 PF00005 ABC transporter NYE86_29570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_29575 PF00005 ABC transporter NYE86_29575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_29580 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_29580 PF12911 N-terminal TM domain of oligopeptide transport permease C NYE86_29585 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_29595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_29595 PF00005 ABC transporter NYE86_29600 PF00005 ABC transporter NYE86_29600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NYE86_29605 PF12911 N-terminal TM domain of oligopeptide transport permease C NYE86_29605 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_29610 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_29615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NYE86_29620 PF03144 Elongation factor Tu domain 2 NYE86_29620 PF00679 Elongation factor G C-terminus NYE86_29620 PF14492 Elongation Factor G, domain II NYE86_29620 PF00009 Elongation factor Tu GTP binding domain NYE86_29645 PF00890 FAD binding domain NYE86_29645 PF02910 Fumarate reductase flavoprotein C-term NYE86_29650 PF13085 2Fe-2S iron-sulfur cluster binding domain NYE86_29650 PF13183 4Fe-4S dicluster domain NYE86_29665 PF04012 PspA/IM30 family NYE86_29675 PF13466 STAS domain NYE86_29675 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_29675 PF08448 PAS fold NYE86_29675 PF13581 Histidine kinase-like ATPase domain NYE86_29680 PF00293 NUDIX domain NYE86_29690 PF02502 Ribose/Galactose Isomerase NYE86_29695 PF00155 Aminotransferase class I and II NYE86_29695 PF00392 Bacterial regulatory proteins, gntR family NYE86_29705 PF00553 Cellulose binding domain NYE86_29705 PF00041 Fibronectin type III domain NYE86_29705 PF00704 Glycosyl hydrolases family 18 NYE86_29710 PF00106 short chain dehydrogenase NYE86_29715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_29715 PF03466 LysR substrate binding domain NYE86_29745 PF00486 Transcriptional regulatory protein, C terminal NYE86_29745 PF03704 Bacterial transcriptional activator domain NYE86_29745 PF00931 NB-ARC domain NYE86_29760 PF02522 Aminoglycoside 3-N-acetyltransferase NYE86_29780 PF00106 short chain dehydrogenase NYE86_29795 PF00176 SNF2 family N-terminal domain NYE86_29795 PF00271 Helicase conserved C-terminal domain NYE86_29855 PF06071 Protein of unknown function (DUF933) NYE86_29855 PF01926 50S ribosome-binding GTPase NYE86_29865 PF00480 ROK family NYE86_29870 PF02401 LytB protein NYE86_29880 PF13742 OB-fold nucleic acid binding domain NYE86_29880 PF02601 Exonuclease VII, large subunit NYE86_29885 PF02609 Exonuclease VII small subunit NYE86_29890 PF00881 Nitroreductase family NYE86_29900 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NYE86_29905 PF02467 Transcription factor WhiB NYE86_29915 PF05683 Fumarase C-terminus NYE86_29915 PF05681 Fumarate hydratase (Fumerase) NYE86_29925 PF00561 alpha/beta hydrolase fold NYE86_29935 PF10415 Fumarase C C-terminus NYE86_29935 PF00206 Lyase NYE86_29945 PF01209 ubiE/COQ5 methyltransferase family NYE86_29970 PF00005 ABC transporter NYE86_29980 PF01594 AI-2E family transporter NYE86_29990 PF02562 PhoH-like protein NYE86_29990 PF13638 PIN domain NYE86_29995 PF01255 Putative undecaprenyl diphosphate synthase NYE86_30000 PF00248 Aldo/keto reductase family NYE86_30045 PF00437 Type II/IV secretion system protein NYE86_30055 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NYE86_30070 PF02018 Carbohydrate binding domain NYE86_30070 PF00704 Glycosyl hydrolases family 18 NYE86_30070 PF00041 Fibronectin type III domain NYE86_30080 PF09339 IclR helix-turn-helix domain NYE86_30080 PF01614 Bacterial transcriptional regulator NYE86_30085 PF00294 pfkB family carbohydrate kinase NYE86_30095 PF07969 Amidohydrolase family NYE86_30105 PF00155 Aminotransferase class I and II NYE86_30110 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NYE86_30110 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NYE86_30115 PF03006 Haemolysin-III related NYE86_30120 PF07690 Major Facilitator Superfamily NYE86_30130 PF03190 Protein of unknown function, DUF255 NYE86_30145 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NYE86_30160 PF07690 Major Facilitator Superfamily NYE86_30165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYE86_30165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYE86_30165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYE86_30170 PF00733 Asparagine synthase NYE86_30170 PF13537 Glutamine amidotransferase domain NYE86_30180 PF00486 Transcriptional regulatory protein, C terminal NYE86_30180 PF00072 Response regulator receiver domain NYE86_30190 PF05973 Phage derived protein Gp49-like (DUF891) NYE86_30205 PF00005 ABC transporter NYE86_30225 PF02585 GlcNAc-PI de-N-acetylase NYE86_30235 PF03449 Transcription elongation factor, N-terminal NYE86_30235 PF01272 Transcription elongation factor, GreA/GreB, C-term NYE86_30240 PF01061 ABC-2 type transporter NYE86_30245 PF13732 Domain of unknown function (DUF4162) NYE86_30245 PF00005 ABC transporter NYE86_30250 PF00291 Pyridoxal-phosphate dependent enzyme NYE86_30250 PF13291 ACT domain NYE86_30270 PF01053 Cys/Met metabolism PLP-dependent enzyme NYE86_30285 PF01261 Xylose isomerase-like TIM barrel NYE86_30290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NYE86_30290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NYE86_30295 PF00480 ROK family NYE86_30310 PF00221 Aromatic amino acid lyase NYE86_30315 PF00990 Diguanylate cyclase, GGDEF domain NYE86_30320 PF00378 Enoyl-CoA hydratase/isomerase NYE86_30325 PF00550 Phosphopantetheine attachment site NYE86_30325 PF00668 Condensation domain NYE86_30325 PF13193 AMP-binding enzyme C-terminal domain NYE86_30325 PF00501 AMP-binding enzyme NYE86_30330 PF02817 e3 binding domain NYE86_30330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NYE86_30330 PF00364 Biotin-requiring enzyme NYE86_30340 PF00676 Dehydrogenase E1 component NYE86_30345 PF00501 AMP-binding enzyme NYE86_30345 PF00550 Phosphopantetheine attachment site NYE86_30345 PF13193 AMP-binding enzyme C-terminal domain NYE86_30345 PF00668 Condensation domain NYE86_30350 PF13193 AMP-binding enzyme C-terminal domain NYE86_30350 PF00501 AMP-binding enzyme NYE86_30355 PF00975 Thioesterase domain NYE86_30355 PF00550 Phosphopantetheine attachment site NYE86_30355 PF00668 Condensation domain NYE86_30355 PF13193 AMP-binding enzyme C-terminal domain NYE86_30355 PF00501 AMP-binding enzyme NYE86_30370 PF00211 Adenylate and Guanylate cyclase catalytic domain NYE86_30370 PF16701 Adenylate cyclase regulatory domain NYE86_30375 PF02237 Biotin protein ligase C terminal domain NYE86_30375 PF08279 HTH domain NYE86_30375 PF03099 Biotin/lipoate A/B protein ligase family NYE86_30380 PF01039 Carboxyl transferase domain NYE86_30395 PF02545 Maf-like protein NYE86_30405 PF00364 Biotin-requiring enzyme NYE86_30405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NYE86_30405 PF00289 Biotin carboxylase, N-terminal domain NYE86_30405 PF02785 Biotin carboxylase C-terminal domain NYE86_30410 PF07690 Major Facilitator Superfamily NYE86_30420 PF00455 DeoR C terminal sensor domain NYE86_30420 PF08220 DeoR-like helix-turn-helix domain NYE86_30430 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_30430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NYE86_30440 PF01048 Phosphorylase superfamily NYE86_30445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NYE86_30445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NYE86_30445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NYE86_30445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NYE86_30475 PF00005 ABC transporter NYE86_30505 PF12849 PBP superfamily domain NYE86_30510 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_30515 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_30535 PF00171 Aldehyde dehydrogenase family NYE86_30540 PF00171 Aldehyde dehydrogenase family NYE86_30545 PF01791 DeoC/LacD family aldolase NYE86_30560 PF04542 Sigma-70 region 2 NYE86_30560 PF08281 Sigma-70, region 4 NYE86_30565 PF08281 Sigma-70, region 4 NYE86_30565 PF04542 Sigma-70 region 2 NYE86_30570 PF00072 Response regulator receiver domain NYE86_30570 PF00486 Transcriptional regulatory protein, C terminal NYE86_30575 PF00672 HAMP domain NYE86_30575 PF00512 His Kinase A (phospho-acceptor) domain NYE86_30575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_30595 PF00962 Adenosine/AMP deaminase NYE86_30605 PF02885 Glycosyl transferase family, helical bundle domain NYE86_30605 PF00591 Glycosyl transferase family, a/b domain NYE86_30605 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NYE86_30610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NYE86_30615 PF02653 Branched-chain amino acid transport system / permease component NYE86_30620 PF02653 Branched-chain amino acid transport system / permease component NYE86_30625 PF00005 ABC transporter NYE86_30630 PF02608 ABC transporter substrate-binding protein PnrA-like NYE86_30635 PF01546 Peptidase family M20/M25/M40 NYE86_30635 PF04107 Glutamate-cysteine ligase family 2(GCS2) NYE86_30650 PF08666 SAF domain NYE86_30650 PF03102 NeuB family NYE86_30655 PF02348 Cytidylyltransferase NYE86_30665 PF00535 Glycosyl transferase family 2 NYE86_30675 PF02310 B12 binding domain NYE86_30675 PF01642 Methylmalonyl-CoA mutase NYE86_30705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NYE86_30715 PF00890 FAD binding domain NYE86_30715 PF02910 Fumarate reductase flavoprotein C-term NYE86_30720 PF13085 2Fe-2S iron-sulfur cluster binding domain NYE86_30725 PF18389 TrmO C-terminal domain NYE86_30725 PF01980 tRNA-methyltransferase O NYE86_30740 PF01494 FAD binding domain NYE86_30750 PF00672 HAMP domain NYE86_30750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_30750 PF00512 His Kinase A (phospho-acceptor) domain NYE86_30755 PF00072 Response regulator receiver domain NYE86_30755 PF00486 Transcriptional regulatory protein, C terminal NYE86_30760 PF03176 MMPL family NYE86_30775 PF00440 Bacterial regulatory proteins, tetR family NYE86_30785 PF00768 D-alanyl-D-alanine carboxypeptidase NYE86_30790 PF03631 Virulence factor BrkB NYE86_30800 PF01040 UbiA prenyltransferase family NYE86_30810 PF01565 FAD binding domain NYE86_30810 PF04030 D-arabinono-1,4-lactone oxidase NYE86_30815 PF00106 short chain dehydrogenase NYE86_30825 PF00579 tRNA synthetases class I (W and Y) NYE86_30830 PF00202 Aminotransferase class-III NYE86_30840 PF02627 Carboxymuconolactone decarboxylase family NYE86_30845 PF00155 Aminotransferase class I and II NYE86_30845 PF00392 Bacterial regulatory proteins, gntR family NYE86_30850 PF00056 lactate/malate dehydrogenase, NAD binding domain NYE86_30850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NYE86_30865 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NYE86_30865 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NYE86_30870 PF06271 RDD family NYE86_30880 PF01808 AICARFT/IMPCHase bienzyme NYE86_30880 PF02142 MGS-like domain NYE86_30885 PF00551 Formyl transferase NYE86_30905 PF00549 CoA-ligase NYE86_30905 PF02629 CoA binding domain NYE86_30910 PF00549 CoA-ligase NYE86_30910 PF08442 ATP-grasp domain NYE86_30915 PF05762 VWA domain containing CoxE-like protein NYE86_30925 PF07728 AAA domain (dynein-related subfamily) NYE86_30960 PF01642 Methylmalonyl-CoA mutase NYE86_30960 PF02310 B12 binding domain NYE86_30965 PF00561 alpha/beta hydrolase fold NYE86_30970 PF04225 Opacity-associated protein A LysM-like domain NYE86_30970 PF01551 Peptidase family M23 NYE86_30975 PF00580 UvrD/REP helicase N-terminal domain NYE86_30975 PF13361 UvrD-like helicase C-terminal domain NYE86_30980 PF00877 NlpC/P60 family NYE86_30985 PF00877 NlpC/P60 family NYE86_30990 PF00877 NlpC/P60 family NYE86_31020 PF00196 Bacterial regulatory proteins, luxR family NYE86_31020 PF00072 Response regulator receiver domain NYE86_31040 PF02540 NAD synthase NYE86_31040 PF00958 GMP synthase C terminal domain NYE86_31040 PF00117 Glutamine amidotransferase class-I NYE86_31045 PF05199 GMC oxidoreductase NYE86_31050 PF00171 Aldehyde dehydrogenase family NYE86_31055 PF00069 Protein kinase domain NYE86_31055 PF03793 PASTA domain NYE86_31060 PF00069 Protein kinase domain NYE86_31065 PF00069 Protein kinase domain NYE86_31070 PF03793 PASTA domain NYE86_31070 PF00069 Protein kinase domain NYE86_31075 PF01266 FAD dependent oxidoreductase NYE86_31075 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NYE86_31080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYE86_31080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYE86_31080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYE86_31090 PF00478 IMP dehydrogenase / GMP reductase domain NYE86_31095 PF00571 CBS domain NYE86_31095 PF00478 IMP dehydrogenase / GMP reductase domain NYE86_31100 PF04545 Sigma-70, region 4 NYE86_31100 PF04542 Sigma-70 region 2 NYE86_31105 PF00072 Response regulator receiver domain NYE86_31105 PF00196 Bacterial regulatory proteins, luxR family NYE86_31110 PF02467 Transcription factor WhiB NYE86_31115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_31115 PF03466 LysR substrate binding domain NYE86_31120 PF00266 Aminotransferase class-V NYE86_31135 PF00561 alpha/beta hydrolase fold NYE86_31135 PF00106 short chain dehydrogenase NYE86_31145 PF00118 TCP-1/cpn60 chaperonin family NYE86_31150 PF00166 Chaperonin 10 Kd subunit NYE86_31155 PF18096 THUMP domain-like NYE86_31160 PF01522 Polysaccharide deacetylase NYE86_31170 PF00814 Glycoprotease family NYE86_31180 PF00814 Glycoprotease family NYE86_31195 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NYE86_31200 PF00364 Biotin-requiring enzyme NYE86_31200 PF00561 alpha/beta hydrolase fold NYE86_31205 PF01168 Alanine racemase, N-terminal domain NYE86_31205 PF00842 Alanine racemase, C-terminal domain NYE86_31220 PF03853 YjeF-related protein N-terminus NYE86_31220 PF01256 Carbohydrate kinase NYE86_31225 PF01648 4'-phosphopantetheinyl transferase superfamily NYE86_31230 PF00485 Phosphoribulokinase / Uridine kinase family NYE86_31235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NYE86_31235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NYE86_31235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NYE86_31235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NYE86_31240 PF00380 Ribosomal protein S9/S16 NYE86_31245 PF00572 Ribosomal protein L13 NYE86_31250 PF00005 ABC transporter NYE86_31250 PF12848 ABC transporter NYE86_31265 PF01416 tRNA pseudouridine synthase NYE86_31270 PF01196 Ribosomal protein L17 NYE86_31275 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NYE86_31275 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NYE86_31275 PF01000 RNA polymerase Rpb3/RpoA insert domain NYE86_31280 PF01479 S4 domain NYE86_31280 PF00163 Ribosomal protein S4/S9 N-terminal domain NYE86_31285 PF00411 Ribosomal protein S11 NYE86_31290 PF00416 Ribosomal protein S13/S18 NYE86_31295 PF00444 Ribosomal protein L36 NYE86_31300 PF01176 Translation initiation factor 1A / IF-1 NYE86_31305 PF00557 Metallopeptidase family M24 NYE86_31310 PF05191 Adenylate kinase, active site lid NYE86_31315 PF00344 SecY translocase NYE86_31320 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NYE86_31325 PF00327 Ribosomal protein L30p/L7e NYE86_31330 PF00333 Ribosomal protein S5, N-terminal domain NYE86_31330 PF03719 Ribosomal protein S5, C-terminal domain NYE86_31335 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NYE86_31340 PF00347 Ribosomal protein L6 NYE86_31345 PF00410 Ribosomal protein S8 NYE86_31350 PF00253 Ribosomal protein S14p/S29e NYE86_31355 PF00673 ribosomal L5P family C-terminus NYE86_31355 PF00281 Ribosomal protein L5 NYE86_31360 PF00467 KOW motif NYE86_31360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NYE86_31365 PF00238 Ribosomal protein L14p/L23e NYE86_31370 PF00366 Ribosomal protein S17 NYE86_31375 PF00831 Ribosomal L29 protein NYE86_31380 PF00252 Ribosomal protein L16p/L10e NYE86_31385 PF00189 Ribosomal protein S3, C-terminal domain NYE86_31385 PF07650 KH domain NYE86_31390 PF00237 Ribosomal protein L22p/L17e NYE86_31395 PF00203 Ribosomal protein S19 NYE86_31400 PF00181 Ribosomal Proteins L2, RNA binding domain NYE86_31400 PF03947 Ribosomal Proteins L2, C-terminal domain NYE86_31405 PF00276 Ribosomal protein L23 NYE86_31410 PF00573 Ribosomal protein L4/L1 family NYE86_31415 PF00297 Ribosomal protein L3 NYE86_31420 PF00338 Ribosomal protein S10p/S20e NYE86_31425 PF02627 Carboxymuconolactone decarboxylase family NYE86_31430 PF00293 NUDIX domain NYE86_31515 PF00005 ABC transporter NYE86_31540 PF03143 Elongation factor Tu C-terminal domain NYE86_31540 PF03144 Elongation factor Tu domain 2 NYE86_31540 PF00009 Elongation factor Tu GTP binding domain NYE86_31545 PF03144 Elongation factor Tu domain 2 NYE86_31545 PF00009 Elongation factor Tu GTP binding domain NYE86_31545 PF03764 Elongation factor G, domain IV NYE86_31545 PF14492 Elongation Factor G, domain II NYE86_31545 PF00679 Elongation factor G C-terminus NYE86_31550 PF00177 Ribosomal protein S7p/S5e NYE86_31555 PF00164 Ribosomal protein S12/S23 NYE86_31565 PF00623 RNA polymerase Rpb1, domain 2 NYE86_31565 PF04997 RNA polymerase Rpb1, domain 1 NYE86_31565 PF04983 RNA polymerase Rpb1, domain 3 NYE86_31565 PF05000 RNA polymerase Rpb1, domain 4 NYE86_31565 PF04998 RNA polymerase Rpb1, domain 5 NYE86_31570 PF04563 RNA polymerase beta subunit NYE86_31570 PF04561 RNA polymerase Rpb2, domain 2 NYE86_31570 PF04565 RNA polymerase Rpb2, domain 3 NYE86_31570 PF04560 RNA polymerase Rpb2, domain 7 NYE86_31570 PF10385 RNA polymerase beta subunit external 1 domain NYE86_31570 PF00562 RNA polymerase Rpb2, domain 6 NYE86_31575 PF16320 Ribosomal protein L7/L12 dimerisation domain NYE86_31575 PF00542 Ribosomal protein L7/L12 C-terminal domain NYE86_31580 PF00466 Ribosomal protein L10 NYE86_31590 PF00687 Ribosomal protein L1p/L10e family NYE86_31595 PF00298 Ribosomal protein L11, RNA binding domain NYE86_31595 PF03946 Ribosomal protein L11, N-terminal domain NYE86_31600 PF13472 GDSL-like Lipase/Acylhydrolase family NYE86_31605 PF02357 Transcription termination factor nusG NYE86_31610 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NYE86_31620 PF00155 Aminotransferase class I and II NYE86_31625 PF00962 Adenosine/AMP deaminase NYE86_31640 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NYE86_31640 PF01565 FAD binding domain NYE86_31645 PF07690 Major Facilitator Superfamily NYE86_31660 PF13452 N-terminal half of MaoC dehydratase NYE86_31665 PF00471 Ribosomal protein L33 NYE86_31685 PF13460 NAD(P)H-binding NYE86_31690 PF00364 Biotin-requiring enzyme NYE86_31690 PF00561 alpha/beta hydrolase fold NYE86_31710 PF04461 Protein of unknown function (DUF520) NYE86_31715 PF00578 AhpC/TSA family NYE86_31720 PF03733 Inner membrane component domain NYE86_31725 PF01435 Peptidase family M48 NYE86_31730 PF00361 Proton-conducting membrane transporter NYE86_31735 PF00361 Proton-conducting membrane transporter NYE86_31735 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NYE86_31740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NYE86_31740 PF00361 Proton-conducting membrane transporter NYE86_31745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NYE86_31750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NYE86_31755 PF00037 4Fe-4S binding domain NYE86_31760 PF00146 NADH dehydrogenase NYE86_31770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NYE86_31775 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NYE86_31790 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_31790 PF14765 Polyketide synthase dehydratase NYE86_31790 PF00550 Phosphopantetheine attachment site NYE86_31790 PF08659 KR domain NYE86_31790 PF00698 Acyl transferase domain NYE86_31790 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_31790 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_31790 PF00107 Zinc-binding dehydrogenase NYE86_31790 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_31795 PF00196 Bacterial regulatory proteins, luxR family NYE86_31795 PF00072 Response regulator receiver domain NYE86_31800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NYE86_31800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NYE86_31800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NYE86_31805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NYE86_31820 PF05368 NmrA-like family NYE86_31825 PF00892 EamA-like transporter family NYE86_31830 PF03358 NADPH-dependent FMN reductase NYE86_31835 PF00553 Cellulose binding domain NYE86_31835 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NYE86_31845 PF00005 ABC transporter NYE86_31855 PF00348 Polyprenyl synthetase NYE86_31860 PF04107 Glutamate-cysteine ligase family 2(GCS2) NYE86_31865 PF12867 DinB superfamily NYE86_31865 PF03781 Sulfatase-modifying factor enzyme 1 NYE86_31875 PF10017 Histidine-specific methyltransferase, SAM-dependent NYE86_31900 PF00361 Proton-conducting membrane transporter NYE86_31905 PF00361 Proton-conducting membrane transporter NYE86_31910 PF00361 Proton-conducting membrane transporter NYE86_31910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NYE86_31915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NYE86_31920 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NYE86_31925 PF12838 4Fe-4S dicluster domain NYE86_31930 PF00146 NADH dehydrogenase NYE86_31935 PF01568 Molydopterin dinucleotide binding domain NYE86_31935 PF00384 Molybdopterin oxidoreductase NYE86_31935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NYE86_31935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYE86_31940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NYE86_31940 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NYE86_31940 PF10531 SLBB domain NYE86_31950 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NYE86_31955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NYE86_31960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NYE86_31965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NYE86_31970 PF00877 NlpC/P60 family NYE86_31980 PF00534 Glycosyl transferases group 1 NYE86_31980 PF13439 Glycosyltransferase Family 4 NYE86_31990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NYE86_31990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NYE86_31990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NYE86_31995 PF00535 Glycosyl transferase family 2 NYE86_32030 PF01209 ubiE/COQ5 methyltransferase family NYE86_32080 PF01494 FAD binding domain NYE86_32090 PF01209 ubiE/COQ5 methyltransferase family NYE86_32095 PF04055 Radical SAM superfamily NYE86_32100 PF02621 Menaquinone biosynthesis NYE86_32105 PF00313 'Cold-shock' DNA-binding domain NYE86_32110 PF00501 AMP-binding enzyme NYE86_32115 PF02803 Thiolase, C-terminal domain NYE86_32115 PF00108 Thiolase, N-terminal domain NYE86_32130 PF01047 MarR family NYE86_32140 PF00440 Bacterial regulatory proteins, tetR family NYE86_32140 PF08361 MAATS-type transcriptional repressor, C-terminal region NYE86_32155 PF04055 Radical SAM superfamily NYE86_32160 PF01037 Lrp/AsnC ligand binding domain NYE86_32165 PF02441 Flavoprotein NYE86_32180 PF01040 UbiA prenyltransferase family NYE86_32185 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NYE86_32190 PF01578 Cytochrome C assembly protein NYE86_32195 PF05140 ResB-like family NYE86_32200 PF02683 Cytochrome C biogenesis protein transmembrane region NYE86_32205 PF08534 Redoxin NYE86_32215 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_32220 PF00202 Aminotransferase class-III NYE86_32235 PF07478 D-ala D-ala ligase C-terminus NYE86_32235 PF01820 D-ala D-ala ligase N-terminus NYE86_32250 PF13086 AAA domain NYE86_32250 PF13087 AAA domain NYE86_32250 PF13195 Protein of unknown function (DUF4011) NYE86_32255 PF03466 LysR substrate binding domain NYE86_32255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_32270 PF01872 RibD C-terminal domain NYE86_32275 PF04961 Formiminotransferase-cyclodeaminase NYE86_32285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NYE86_32285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NYE86_32295 PF00106 short chain dehydrogenase NYE86_32315 PF01139 tRNA-splicing ligase RtcB NYE86_32340 PF01921 tRNA synthetases class I (K) NYE86_32345 PF00750 tRNA synthetases class I (R) NYE86_32345 PF03485 Arginyl tRNA synthetase N terminal domain NYE86_32345 PF05746 DALR anticodon binding domain NYE86_32350 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_32350 PF13581 Histidine kinase-like ATPase domain NYE86_32350 PF08448 PAS fold NYE86_32350 PF13466 STAS domain NYE86_32360 PF00490 Delta-aminolevulinic acid dehydratase NYE86_32365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NYE86_32365 PF10414 Sirohaem synthase dimerisation region NYE86_32365 PF14824 Sirohaem biosynthesis protein central NYE86_32370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NYE86_32370 PF03900 Porphobilinogen deaminase, C-terminal domain NYE86_32375 PF01488 Shikimate / quinate 5-dehydrogenase NYE86_32375 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NYE86_32375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NYE86_32380 PF06971 Putative DNA-binding protein N-terminus NYE86_32380 PF02629 CoA binding domain NYE86_32390 PF05768 Glutaredoxin-like domain (DUF836) NYE86_32400 PF08281 Sigma-70, region 4 NYE86_32400 PF04542 Sigma-70 region 2 NYE86_32410 PF01553 Acyltransferase NYE86_32420 PF01370 NAD dependent epimerase/dehydratase family NYE86_32430 PF12728 Helix-turn-helix domain NYE86_32435 PF15698 Phosphatase NYE86_32440 PF00850 Histone deacetylase domain NYE86_32450 PF13419 Haloacid dehalogenase-like hydrolase NYE86_32470 PF00579 tRNA synthetases class I (W and Y) NYE86_32475 PF03807 NADP oxidoreductase coenzyme F420-dependent NYE86_32475 PF14748 Pyrroline-5-carboxylate reductase dimerisation NYE86_32485 PF00005 ABC transporter NYE86_32500 PF00106 short chain dehydrogenase NYE86_32530 PF13472 GDSL-like Lipase/Acylhydrolase family NYE86_32535 PF00920 Dehydratase family NYE86_32550 PF01261 Xylose isomerase-like TIM barrel NYE86_32555 PF02541 Ppx/GppA phosphatase family NYE86_32575 PF00557 Metallopeptidase family M24 NYE86_32585 PF18073 Rubredoxin metal binding domain NYE86_32590 PF02457 DisA bacterial checkpoint controller nucleotide-binding NYE86_32590 PF10635 DisA bacterial checkpoint controller linker region NYE86_32590 PF12826 Helix-hairpin-helix motif NYE86_32600 PF00633 Helix-hairpin-helix motif NYE86_32600 PF10576 Iron-sulfur binding domain of endonuclease III NYE86_32600 PF00730 HhH-GPD superfamily base excision DNA repair protein NYE86_32605 PF04542 Sigma-70 region 2 NYE86_32605 PF08281 Sigma-70, region 4 NYE86_32615 PF00486 Transcriptional regulatory protein, C terminal NYE86_32615 PF00072 Response regulator receiver domain NYE86_32620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_32620 PF00672 HAMP domain NYE86_32620 PF00512 His Kinase A (phospho-acceptor) domain NYE86_32645 PF02698 DUF218 domain NYE86_32665 PF07690 Major Facilitator Superfamily NYE86_32670 PF08361 MAATS-type transcriptional repressor, C-terminal region NYE86_32670 PF00440 Bacterial regulatory proteins, tetR family NYE86_32675 PF10145 Phage-related minor tail protein NYE86_32675 PF01464 Transglycosylase SLT domain NYE86_32675 PF01551 Peptidase family M23 NYE86_32680 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_32680 PF07724 AAA domain (Cdc48 subfamily) NYE86_32680 PF17871 AAA lid domain NYE86_32680 PF02861 Clp amino terminal domain, pathogenicity island component NYE86_32680 PF10431 C-terminal, D2-small domain, of ClpB protein NYE86_32690 PF11774 Lsr2 NYE86_32695 PF00583 Acetyltransferase (GNAT) family NYE86_32715 PF03309 Type III pantothenate kinase NYE86_32720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NYE86_32720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NYE86_32725 PF00890 FAD binding domain NYE86_32725 PF02910 Fumarate reductase flavoprotein C-term NYE86_32730 PF02569 Pantoate-beta-alanine ligase NYE86_32740 PF07730 Histidine kinase NYE86_32740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_32740 PF05384 Sensor protein DegS NYE86_32745 PF00196 Bacterial regulatory proteins, luxR family NYE86_32745 PF00072 Response regulator receiver domain NYE86_32755 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_32755 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_32755 PF00698 Acyl transferase domain NYE86_32755 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_32755 PF08659 KR domain NYE86_32755 PF00550 Phosphopantetheine attachment site NYE86_32755 PF14765 Polyketide synthase dehydratase NYE86_32755 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_32755 PF00107 Zinc-binding dehydrogenase NYE86_32760 PF00990 Diguanylate cyclase, GGDEF domain NYE86_32760 PF03707 Bacterial signalling protein N terminal repeat NYE86_32760 PF00563 EAL domain NYE86_32765 PF01613 Flavin reductase like domain NYE86_32770 PF03462 PCRF domain NYE86_32770 PF00472 RF-1 domain NYE86_32775 PF02342 TerD domain NYE86_32790 PF00196 Bacterial regulatory proteins, luxR family NYE86_32790 PF00072 Response regulator receiver domain NYE86_32795 PF00196 Bacterial regulatory proteins, luxR family NYE86_32805 PF00282 Pyridoxal-dependent decarboxylase conserved domain NYE86_32815 PF09334 tRNA synthetases class I (M) NYE86_32815 PF01588 Putative tRNA binding domain NYE86_32820 PF01266 FAD dependent oxidoreductase NYE86_32830 PF02655 ATP-grasp domain NYE86_32830 PF00206 Lyase NYE86_32835 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NYE86_32850 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NYE86_32855 PF02310 B12 binding domain NYE86_32855 PF04055 Radical SAM superfamily NYE86_32860 PF00196 Bacterial regulatory proteins, luxR family NYE86_32860 PF00072 Response regulator receiver domain NYE86_32875 PF08031 Berberine and berberine like NYE86_32875 PF01565 FAD binding domain NYE86_32900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NYE86_32900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NYE86_32930 PF00248 Aldo/keto reductase family NYE86_32935 PF01061 ABC-2 type transporter NYE86_32940 PF13732 Domain of unknown function (DUF4162) NYE86_32940 PF00005 ABC transporter NYE86_32975 PF07702 UTRA domain NYE86_32975 PF00392 Bacterial regulatory proteins, gntR family NYE86_32995 PF05191 Adenylate kinase, active site lid NYE86_33020 PF00072 Response regulator receiver domain NYE86_33020 PF00196 Bacterial regulatory proteins, luxR family NYE86_33050 PF00072 Response regulator receiver domain NYE86_33050 PF00196 Bacterial regulatory proteins, luxR family NYE86_33090 PF17912 MalK OB fold domain NYE86_33090 PF00005 ABC transporter NYE86_33100 PF00483 Nucleotidyl transferase NYE86_33110 PF00588 SpoU rRNA Methylase family NYE86_33110 PF08032 RNA 2'-O ribose methyltransferase substrate binding NYE86_33115 PF09190 DALR domain NYE86_33115 PF01406 tRNA synthetases class I (C) catalytic domain NYE86_33120 PF02542 YgbB family NYE86_33125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NYE86_33130 PF02559 CarD-like/TRCF domain NYE86_33140 PF00486 Transcriptional regulatory protein, C terminal NYE86_33140 PF00072 Response regulator receiver domain NYE86_33145 PF00512 His Kinase A (phospho-acceptor) domain NYE86_33145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_33150 PF01895 PhoU domain NYE86_33160 PF00005 ABC transporter NYE86_33170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_33170 PF00672 HAMP domain NYE86_33170 PF07730 Histidine kinase NYE86_33175 PF00196 Bacterial regulatory proteins, luxR family NYE86_33175 PF00072 Response regulator receiver domain NYE86_33235 PF00392 Bacterial regulatory proteins, gntR family NYE86_33235 PF07702 UTRA domain NYE86_33265 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_33275 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) NYE86_33275 PF13229 Right handed beta helix region NYE86_33275 PF12708 Pectate lyase superfamily protein NYE86_33280 PF10722 Putative bacterial sensory transduction regulator NYE86_33285 PF13439 Glycosyltransferase Family 4 NYE86_33285 PF00534 Glycosyl transferases group 1 NYE86_33295 PF13466 STAS domain NYE86_33295 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_33295 PF08448 PAS fold NYE86_33295 PF13581 Histidine kinase-like ATPase domain NYE86_33310 PF01381 Helix-turn-helix NYE86_33315 PF00698 Acyl transferase domain NYE86_33315 PF14765 Polyketide synthase dehydratase NYE86_33315 PF00550 Phosphopantetheine attachment site NYE86_33315 PF08659 KR domain NYE86_33315 PF02801 Beta-ketoacyl synthase, C-terminal domain NYE86_33315 PF16197 Ketoacyl-synthetase C-terminal extension NYE86_33315 PF00109 Beta-ketoacyl synthase, N-terminal domain NYE86_33315 PF00107 Zinc-binding dehydrogenase NYE86_33315 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_33335 PF03466 LysR substrate binding domain NYE86_33335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_33340 PF04542 Sigma-70 region 2 NYE86_33340 PF08281 Sigma-70, region 4 NYE86_33345 PF08338 Domain of unknown function (DUF1731) NYE86_33345 PF01370 NAD dependent epimerase/dehydratase family NYE86_33360 PF03466 LysR substrate binding domain NYE86_33360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_33375 PF00899 ThiF family NYE86_33385 PF01118 Semialdehyde dehydrogenase, NAD binding domain NYE86_33385 PF02774 Semialdehyde dehydrogenase, dimerisation domain NYE86_33390 PF00701 Dihydrodipicolinate synthetase family NYE86_33425 PF17668 Acetyltransferase (GNAT) domain NYE86_33425 PF13530 Sterol carrier protein domain NYE86_33435 PF02580 D-Tyr-tRNA(Tyr) deacylase NYE86_33440 PF01571 Aminomethyltransferase folate-binding domain NYE86_33440 PF08669 Glycine cleavage T-protein C-terminal barrel domain NYE86_33445 PF01475 Ferric uptake regulator family NYE86_33450 PF08768 Domain of unknown function (DUF1794) NYE86_33480 PF07210 Protein of unknown function (DUF1416) NYE86_33485 PF00581 Rhodanese-like domain NYE86_33510 PF00486 Transcriptional regulatory protein, C terminal NYE86_33515 PF00356 Bacterial regulatory proteins, lacI family NYE86_33520 PF13180 PDZ domain NYE86_33525 PF00072 Response regulator receiver domain NYE86_33525 PF00486 Transcriptional regulatory protein, C terminal NYE86_33530 PF00672 HAMP domain NYE86_33530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_33530 PF00512 His Kinase A (phospho-acceptor) domain NYE86_33535 PF07690 Major Facilitator Superfamily NYE86_33540 PF00583 Acetyltransferase (GNAT) family NYE86_33545 PF02503 Polyphosphate kinase middle domain NYE86_33545 PF13090 Polyphosphate kinase C-terminal domain 2 NYE86_33545 PF17941 Polyphosphate kinase C-terminal domain 1 NYE86_33545 PF13089 Polyphosphate kinase N-terminal domain NYE86_33555 PF00300 Histidine phosphatase superfamily (branch 1) NYE86_33555 PF00293 NUDIX domain NYE86_33560 PF12849 PBP superfamily domain NYE86_33565 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_33570 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_33575 PF00005 ABC transporter NYE86_33580 PF01384 Phosphate transporter family NYE86_33590 PF02583 Metal-sensitive transcriptional repressor NYE86_33610 PF08031 Berberine and berberine like NYE86_33610 PF01565 FAD binding domain NYE86_33620 PF10145 Phage-related minor tail protein NYE86_33620 PF01551 Peptidase family M23 NYE86_33620 PF01464 Transglycosylase SLT domain NYE86_33665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NYE86_33665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NYE86_33670 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_33675 PF00528 Binding-protein-dependent transport system inner membrane component NYE86_33685 PF00356 Bacterial regulatory proteins, lacI family NYE86_33690 PF00107 Zinc-binding dehydrogenase NYE86_33690 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_33700 PF12680 SnoaL-like domain NYE86_33700 PF08281 Sigma-70, region 4 NYE86_33700 PF04542 Sigma-70 region 2 NYE86_33730 PF13466 STAS domain NYE86_33730 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_33730 PF13581 Histidine kinase-like ATPase domain NYE86_33730 PF08448 PAS fold NYE86_33735 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_33755 PF00196 Bacterial regulatory proteins, luxR family NYE86_33760 PF02223 Thymidylate kinase NYE86_33765 PF01131 DNA topoisomerase NYE86_33765 PF01751 Toprim domain NYE86_33765 PF13368 Topoisomerase C-terminal repeat NYE86_33780 PF05175 Methyltransferase small domain NYE86_33780 PF17827 PrmC N-terminal domain NYE86_33790 PF03030 Inorganic H+ pyrophosphatase NYE86_33795 PF13581 Histidine kinase-like ATPase domain NYE86_33800 PF01740 STAS domain NYE86_33805 PF09369 Domain of unknown function (DUF1998) NYE86_33805 PF00271 Helicase conserved C-terminal domain NYE86_33805 PF00270 DEAD/DEAH box helicase NYE86_33835 PF00437 Type II/IV secretion system protein NYE86_33865 PF00484 Carbonic anhydrase NYE86_33870 PF00501 AMP-binding enzyme NYE86_33870 PF13193 AMP-binding enzyme C-terminal domain NYE86_33870 PF16177 Acetyl-coenzyme A synthetase N-terminus NYE86_33875 PF06965 Na+/H+ antiporter 1 NYE86_33885 PF00561 alpha/beta hydrolase fold NYE86_33895 PF02674 Colicin V production protein NYE86_33900 PF00293 NUDIX domain NYE86_33905 PF00633 Helix-hairpin-helix motif NYE86_33905 PF00730 HhH-GPD superfamily base excision DNA repair protein NYE86_33905 PF10576 Iron-sulfur binding domain of endonuclease III NYE86_33910 PF13545 Crp-like helix-turn-helix domain NYE86_33910 PF00027 Cyclic nucleotide-binding domain NYE86_33920 PF00266 Aminotransferase class-V NYE86_33925 PF03301 Tryptophan 2,3-dioxygenase NYE86_33940 PF01116 Fructose-bisphosphate aldolase class-II NYE86_33945 PF00156 Phosphoribosyl transferase domain NYE86_33970 PF01227 GTP cyclohydrolase I NYE86_33980 PF00155 Aminotransferase class I and II NYE86_34005 PF06155 Protein of unknown function (DUF971) NYE86_34005 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NYE86_34010 PF00392 Bacterial regulatory proteins, gntR family NYE86_34015 PF13416 Bacterial extracellular solute-binding protein NYE86_34030 PF00005 ABC transporter NYE86_34030 PF08402 TOBE domain NYE86_34035 PF13419 Haloacid dehalogenase-like hydrolase NYE86_34040 PF00893 Small Multidrug Resistance protein NYE86_34050 PF04185 Phosphoesterase family NYE86_34050 PF05506 Domain of unknown function (DUF756) NYE86_34055 PF00764 Arginosuccinate synthase NYE86_34060 PF03176 MMPL family NYE86_34080 PF07724 AAA domain (Cdc48 subfamily) NYE86_34080 PF02861 Clp amino terminal domain, pathogenicity island component NYE86_34080 PF10431 C-terminal, D2-small domain, of ClpB protein NYE86_34080 PF17871 AAA lid domain NYE86_34080 PF00004 ATPase family associated with various cellular activities (AAA) NYE86_34090 PF13411 MerR HTH family regulatory protein NYE86_34095 PF00226 DnaJ domain NYE86_34095 PF00684 DnaJ central domain NYE86_34095 PF01556 DnaJ C terminal domain NYE86_34100 PF01025 GrpE NYE86_34105 PF00012 Hsp70 protein NYE86_34115 PF02754 Cysteine-rich domain NYE86_34115 PF13183 4Fe-4S dicluster domain NYE86_34130 PF00692 dUTPase NYE86_34155 PF01451 Low molecular weight phosphotyrosine protein phosphatase NYE86_34160 PF01022 Bacterial regulatory protein, arsR family NYE86_34165 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_34165 PF04324 BFD-like [2Fe-2S] binding domain NYE86_34170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NYE86_34210 PF05593 RHS Repeat NYE86_34210 PF03527 RHS protein NYE86_34225 PF03033 Glycosyltransferase family 28 N-terminal domain NYE86_34265 PF07690 Major Facilitator Superfamily NYE86_34285 PF00248 Aldo/keto reductase family NYE86_34290 PF01037 Lrp/AsnC ligand binding domain NYE86_34305 PF00005 ABC transporter NYE86_34315 PF16859 Tetracyclin repressor-like, C-terminal domain NYE86_34315 PF00440 Bacterial regulatory proteins, tetR family NYE86_34320 PF02705 K+ potassium transporter NYE86_34325 PF02983 Alpha-lytic protease prodomain NYE86_34330 PF00107 Zinc-binding dehydrogenase NYE86_34330 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_34335 PF00072 Response regulator receiver domain NYE86_34360 PF13411 MerR HTH family regulatory protein NYE86_34360 PF07739 TipAS antibiotic-recognition domain NYE86_34380 PF03358 NADPH-dependent FMN reductase NYE86_34420 PF13411 MerR HTH family regulatory protein NYE86_34425 PF00248 Aldo/keto reductase family NYE86_34430 PF05506 Domain of unknown function (DUF756) NYE86_34430 PF04185 Phosphoesterase family NYE86_34450 PF00005 ABC transporter NYE86_34450 PF13732 Domain of unknown function (DUF4162) NYE86_34455 PF00392 Bacterial regulatory proteins, gntR family NYE86_34455 PF00155 Aminotransferase class I and II NYE86_34490 PF01183 Glycosyl hydrolases family 25 NYE86_34525 PF12849 PBP superfamily domain NYE86_34540 PF06441 Epoxide hydrolase N terminus NYE86_34560 PF00440 Bacterial regulatory proteins, tetR family NYE86_34585 PF11468 Aromatic prenyltransferase Orf2 NYE86_34590 PF12833 Helix-turn-helix domain NYE86_34590 PF01965 DJ-1/PfpI family NYE86_34595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NYE86_34595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NYE86_34610 PF00457 Glycosyl hydrolases family 11 NYE86_34610 PF01522 Polysaccharide deacetylase NYE86_34615 PF00553 Cellulose binding domain NYE86_34615 PF01341 Glycosyl hydrolases family 6 NYE86_34630 PF16355 Domain of unknown function (DUF4982) NYE86_34630 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NYE86_34630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NYE86_34630 PF02837 Glycosyl hydrolases family 2, sugar binding domain NYE86_34630 PF00703 Glycosyl hydrolases family 2 NYE86_34635 PF08240 Alcohol dehydrogenase GroES-like domain NYE86_34635 PF00107 Zinc-binding dehydrogenase NYE86_34640 PF02342 TerD domain NYE86_34690 PF04542 Sigma-70 region 2 NYE86_34690 PF08281 Sigma-70, region 4 NYE86_34715 PF04542 Sigma-70 region 2 NYE86_34715 PF08281 Sigma-70, region 4 NYE86_34720 PF00069 Protein kinase domain NYE86_34720 PF07238 PilZ domain NYE86_34770 PF10518 TAT (twin-arginine translocation) pathway signal sequence NYE86_34770 PF04261 Dyp-type peroxidase family NYE86_34820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_34820 PF00512 His Kinase A (phospho-acceptor) domain NYE86_34820 PF00672 HAMP domain NYE86_34880 PF00487 Fatty acid desaturase NYE86_34895 PF01980 tRNA-methyltransferase O NYE86_34895 PF18389 TrmO C-terminal domain NYE86_34960 PF12307 Protein of unknown function (DUF3631) NYE86_34970 PF12728 Helix-turn-helix domain NYE86_34975 PF14659 Phage integrase, N-terminal SAM-like domain NYE86_34975 PF00589 Phage integrase family NYE86_35005 PF12169 DNA polymerase III subunits gamma and tau domain III NYE86_35015 PF02575 YbaB/EbfC DNA-binding family NYE86_35020 PF00633 Helix-hairpin-helix motif NYE86_35020 PF02132 RecR protein NYE86_35020 PF13662 Toprim domain NYE86_35030 PF00696 Amino acid kinase family NYE86_35030 PF01842 ACT domain NYE86_35030 PF13840 ACT domain NYE86_35035 PF08281 Sigma-70, region 4 NYE86_35035 PF04542 Sigma-70 region 2 NYE86_35050 PF00326 Prolyl oligopeptidase family NYE86_35060 PF00440 Bacterial regulatory proteins, tetR family NYE86_35070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NYE86_35070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NYE86_35090 PF05922 Peptidase inhibitor I9 NYE86_35090 PF00082 Subtilase family NYE86_35095 PF12833 Helix-turn-helix domain NYE86_35095 PF12852 Cupin NYE86_35105 PF00196 Bacterial regulatory proteins, luxR family NYE86_35105 PF00072 Response regulator receiver domain NYE86_35110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_35110 PF07730 Histidine kinase NYE86_35120 PF13732 Domain of unknown function (DUF4162) NYE86_35120 PF00005 ABC transporter NYE86_35135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NYE86_35135 PF00384 Molybdopterin oxidoreductase NYE86_35135 PF01568 Molydopterin dinucleotide binding domain NYE86_35140 PF12833 Helix-turn-helix domain NYE86_35140 PF01965 DJ-1/PfpI family NYE86_35145 PF01965 DJ-1/PfpI family NYE86_35160 PF03777 ChpA-C NYE86_35165 PF03777 ChpA-C NYE86_35175 PF00534 Glycosyl transferases group 1 NYE86_35175 PF13439 Glycosyltransferase Family 4 NYE86_35180 PF02397 Bacterial sugar transferase NYE86_35190 PF03023 Lipid II flippase MurJ NYE86_35200 PF13439 Glycosyltransferase Family 4 NYE86_35220 PF06236 Tyrosinase co-factor MelC1 NYE86_35225 PF00264 Common central domain of tyrosinase NYE86_35230 PF03777 ChpA-C NYE86_35245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NYE86_35250 PF02641 Uncharacterized ACR, COG1993 NYE86_35255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NYE86_35275 PF13581 Histidine kinase-like ATPase domain NYE86_35275 PF07228 Stage II sporulation protein E (SpoIIE) NYE86_35275 PF13466 STAS domain NYE86_35275 PF08448 PAS fold NYE86_35280 PF07690 Major Facilitator Superfamily NYE86_35285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NYE86_35285 PF03466 LysR substrate binding domain NYE86_35320 PF14437 MafB19-like deaminase NYE86_35335 PF01266 FAD dependent oxidoreductase NYE86_35345 PF07876 Stress responsive A/B Barrel Domain NYE86_35350 PF04542 Sigma-70 region 2 NYE86_35350 PF04539 Sigma-70 region 3 NYE86_35350 PF04545 Sigma-70, region 4 NYE86_35355 PF04539 Sigma-70 region 3 NYE86_35355 PF04542 Sigma-70 region 2 NYE86_35355 PF04545 Sigma-70, region 4 NYE86_35385 PF00512 His Kinase A (phospho-acceptor) domain NYE86_35385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NYE86_35385 PF00672 HAMP domain NYE86_35390 PF00486 Transcriptional regulatory protein, C terminal NYE86_35390 PF00072 Response regulator receiver domain NYE86_35400 PF01636 Phosphotransferase enzyme family NYE86_35485 PF02627 Carboxymuconolactone decarboxylase family NYE86_35495 PF00501 AMP-binding enzyme NYE86_35495 PF13193 AMP-binding enzyme C-terminal domain NYE86_35500 PF08281 Sigma-70, region 4 NYE86_35500 PF04542 Sigma-70 region 2 NYE86_35520 PF02082 Transcriptional regulator NYE86_35585 PF07702 UTRA domain NYE86_35585 PF00392 Bacterial regulatory proteins, gntR family NYE86_35595 PF13180 PDZ domain NYE86_35600 PF03009 Glycerophosphoryl diester phosphodiesterase family NYE86_35610 PF07516 SecA Wing and Scaffold domain NYE86_35610 PF01043 SecA preprotein cross-linking domain NYE86_35610 PF07517 SecA DEAD-like domain NYE86_35610 PF02810 SEC-C motif NYE86_35625 PF05195 Aminopeptidase P, N-terminal domain NYE86_35625 PF00557 Metallopeptidase family M24 NYE86_35645 PF02630 SCO1/SenC NYE86_35655 PF04234 CopC domain NYE86_35660 PF04261 Dyp-type peroxidase family NYE86_35665 PF01842 ACT domain NYE86_35665 PF00800 Prephenate dehydratase NYE86_35670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NYE86_35670 PF02403 Seryl-tRNA synthetase N-terminal domain NYE86_35690 PF00005 ABC transporter NYE86_35700 PF00005 ABC transporter NYE86_35700 PF13732 Domain of unknown function (DUF4162) NYE86_35725 PF00296 Luciferase-like monooxygenase NYE86_35730 PF13460 NAD(P)H-binding NYE86_35755 PF00664 ABC transporter transmembrane region NYE86_35755 PF00005 ABC transporter NYE86_35760 PF02322 Cytochrome bd terminal oxidase subunit II NYE86_35765 PF01654 Cytochrome bd terminal oxidase subunit I NYE86_35770 PF00155 Aminotransferase class I and II NYE86_35775 PF00356 Bacterial regulatory proteins, lacI family NYE86_35775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NYE86_35780 PF00149 Calcineurin-like phosphoesterase NYE86_35795 PF01964 Radical SAM ThiC family NYE86_35795 PF13667 ThiC-associated domain NYE86_35805 PF17260 Family of unknown function (DUF5326) NYE86_35810 PF07883 Cupin domain NYE86_35815 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NYE86_35820 PF01053 Cys/Met metabolism PLP-dependent enzyme NYE86_35830 PF12802 MarR family NYE86_35835 PF07690 Major Facilitator Superfamily NYE86_35840 PF00144 Beta-lactamase NYE86_35850 PF14310 Fibronectin type III-like domain NYE86_35850 PF00933 Glycosyl hydrolase family 3 N terminal domain NYE86_35850 PF01915 Glycosyl hydrolase family 3 C-terminal domain NYE86_35865 PF00772 DnaB-like helicase N terminal domain NYE86_35865 PF03796 DnaB-like helicase C terminal domain NYE86_35875 PF03948 Ribosomal protein L9, C-terminal domain NYE86_35875 PF01281 Ribosomal protein L9, N-terminal domain NYE86_35880 PF01084 Ribosomal protein S18 NYE86_35885 PF00436 Single-strand binding protein family NYE86_35890 PF01250 Ribosomal protein S6 NYE86_35915 PF00912 Transglycosylase NYE86_35915 PF00905 Penicillin binding protein transpeptidase domain NYE86_35925 PF01658 Myo-inositol-1-phosphate synthase NYE86_35930 PF07690 Major Facilitator Superfamily NYE86_35935 PF13735 tRNA nucleotidyltransferase domain 2 putative NYE86_35935 PF12627 Probable RNA and SrmB- binding site of polymerase A NYE86_35935 PF01743 Poly A polymerase head domain NYE86_35950 PF03023 Lipid II flippase MurJ NYE86_35955 PF03793 PASTA domain NYE86_35955 PF00069 Protein kinase domain NYE86_35960 PF04542 Sigma-70 region 2 NYE86_35960 PF08281 Sigma-70, region 4 NYE86_35970 PF07992 Pyridine nucleotide-disulphide oxidoreductase NYE86_35975 PF00085 Thioredoxin NYE86_35985 PF17762 HTH domain found in ParB protein NYE86_35985 PF02195 ParB-like nuclease domain NYE86_35990 PF13614 AAA domain NYE86_35995 PF02527 rRNA small subunit methyltransferase G NYE86_36005 PF02096 60Kd inner membrane protein NYE86_36010 PF01809 Putative membrane protein insertion efficiency factor NYE86_36015 PF00825 Ribonuclease P NYE86_36020 PF00468 Ribosomal protein L34