locus-tag class description EXH44_00045 PF01545 Cation efflux family EXH44_00045 PF16916 Dimerisation domain of Zinc Transporter EXH44_00055 PF00075 RNase H EXH44_00060 PF00152 tRNA synthetases class II (D, K and N) EXH44_00060 PF01336 OB-fold nucleic acid binding domain EXH44_00065 PF02541 Ppx/GppA phosphatase family EXH44_00105 PF04074 YhcH/YjgK/YiaL EXH44_00110 PF01380 SIS domain EXH44_00110 PF01418 Helix-turn-helix domain, rpiR family EXH44_00115 PF00701 Dihydrodipicolinate synthetase family EXH44_00120 PF02222 ATP-grasp domain EXH44_00120 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EXH44_00125 PF17763 Glutaminase/Asparaginase C-terminal domain EXH44_00125 PF00710 Asparaginase, N-terminal EXH44_00130 PF00731 AIR carboxylase EXH44_00135 PF17831 Pyruvate dehydrogenase E1 component middle domain EXH44_00135 PF00456 Transketolase, thiamine diphosphate binding domain EXH44_00140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EXH44_00140 PF02817 e3 binding domain EXH44_00140 PF00364 Biotin-requiring enzyme EXH44_00145 PF07992 Pyridine nucleotide-disulphide oxidoreductase EXH44_00145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EXH44_00150 PF00696 Amino acid kinase family EXH44_00150 PF00583 Acetyltransferase (GNAT) family EXH44_00155 PF00155 Aminotransferase class I and II EXH44_00160 PF17848 Acetyl-coA carboxylase zinc finger domain EXH44_00160 PF01039 Carboxyl transferase domain EXH44_00165 PF08245 Mur ligase middle domain EXH44_00175 PF01420 Type I restriction modification DNA specificity domain EXH44_00185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EXH44_00185 PF18766 SWI2/SNF2 ATPase EXH44_00185 PF11867 Domain of unknown function (DUF3387) EXH44_00190 PF01047 MarR family EXH44_00190 PF00480 ROK family EXH44_00195 PF01612 3'-5' exonuclease EXH44_00195 PF00570 HRDC domain EXH44_00200 PF07995 Glucose / Sorbosone dehydrogenase EXH44_00205 PF00871 Acetokinase family EXH44_00210 PF07085 DRTGG domain EXH44_00210 PF01515 Phosphate acetyl/butaryl transferase EXH44_00215 PF01253 Translation initiation factor SUI1 EXH44_00220 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EXH44_00225 PF18073 Rubredoxin metal binding domain EXH44_00230 PF06305 Lipopolysaccharide assembly protein A domain EXH44_00235 PF00216 Bacterial DNA-binding protein EXH44_00240 PF00575 S1 RNA binding domain EXH44_00245 PF02224 Cytidylate kinase EXH44_00250 PF13180 PDZ domain EXH44_00255 PF00483 Nucleotidyl transferase EXH44_00260 PF02599 Global regulator protein family EXH44_00265 PF01411 tRNA synthetases class II (A) EXH44_00265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EXH44_00265 PF02272 DHHA1 domain EXH44_00270 PF00582 Universal stress protein family EXH44_00275 PF01728 FtsJ-like methyltransferase EXH44_00275 PF18125 RlmM ferredoxin-like domain EXH44_00280 PF04241 Protein of unknown function (DUF423) EXH44_00285 PF06463 Molybdenum Cofactor Synthesis C EXH44_00285 PF04055 Radical SAM superfamily EXH44_00290 PF01967 MoaC family EXH44_00295 PF02597 ThiS family EXH44_00300 PF02391 MoaE protein EXH44_00305 PF02130 Uncharacterized protein family UPF0054 EXH44_00315 PF13718 GNAT acetyltransferase 2 EXH44_00315 PF05127 Helicase EXH44_00315 PF17176 tRNA-binding domain EXH44_00320 PF13407 Periplasmic binding protein domain EXH44_00325 PF00005 ABC transporter EXH44_00330 PF02653 Branched-chain amino acid transport system / permease component EXH44_00340 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EXH44_00345 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EXH44_00345 PF00749 tRNA synthetases class I (E and Q), catalytic domain EXH44_00355 PF04261 Dyp-type peroxidase family EXH44_00355 PF10518 TAT (twin-arginine translocation) pathway signal sequence EXH44_00360 PF09375 Imelysin EXH44_00375 PF01292 Prokaryotic cytochrome b561 EXH44_00380 PF09163 Formate dehydrogenase N, transmembrane EXH44_00380 PF13247 4Fe-4S dicluster domain EXH44_00385 PF01568 Molydopterin dinucleotide binding domain EXH44_00385 PF00384 Molybdopterin oxidoreductase EXH44_00385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EXH44_00390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EXH44_00390 PF01568 Molydopterin dinucleotide binding domain EXH44_00390 PF00384 Molybdopterin oxidoreductase EXH44_00395 PF02634 FdhD/NarQ family EXH44_00400 PF00285 Citrate synthase, C-terminal domain EXH44_00405 PF11791 Aconitate B N-terminal domain EXH44_00405 PF06434 Aconitate hydratase 2 N-terminus EXH44_00405 PF00330 Aconitase family (aconitate hydratase) EXH44_00410 PF00180 Isocitrate/isopropylmalate dehydrogenase EXH44_00415 PF02219 Methylenetetrahydrofolate reductase EXH44_00425 PF03840 Preprotein translocase SecG subunit EXH44_00430 PF01751 Toprim domain EXH44_00430 PF01131 DNA topoisomerase EXH44_00435 PF03411 Penicillin-insensitive murein endopeptidase EXH44_00440 PF00696 Amino acid kinase family EXH44_00440 PF01842 ACT domain EXH44_00445 PF07690 Major Facilitator Superfamily EXH44_00450 PF00152 tRNA synthetases class II (D, K and N) EXH44_00450 PF01336 OB-fold nucleic acid binding domain EXH44_00455 PF01264 Chorismate synthase EXH44_00460 PF00924 Mechanosensitive ion channel EXH44_00460 PF12795 Mechanosensitive ion channel porin domain EXH44_00460 PF12794 Mechanosensitive ion channel inner membrane domain 1 EXH44_00465 PF00501 AMP-binding enzyme EXH44_00470 PF03925 SeqA protein C-terminal domain EXH44_00470 PF17206 SeqA protein N-terminal domain EXH44_00475 PF00561 alpha/beta hydrolase fold EXH44_00480 PF04386 Stringent starvation protein B EXH44_00485 PF00043 Glutathione S-transferase, C-terminal domain EXH44_00485 PF02798 Glutathione S-transferase, N-terminal domain EXH44_00490 PF04363 Protein of unknown function (DUF496) EXH44_00495 PF00155 Aminotransferase class I and II EXH44_00500 PF00266 Aminotransferase class-V EXH44_00505 PF00557 Metallopeptidase family M24 EXH44_00505 PF05195 Aminopeptidase P, N-terminal domain EXH44_00510 PF03819 MazG nucleotide pyrophosphohydrolase domain EXH44_00515 PF00072 Response regulator receiver domain EXH44_00515 PF00486 Transcriptional regulatory protein, C terminal EXH44_00520 PF00512 His Kinase A (phospho-acceptor) domain EXH44_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_00520 PF00672 HAMP domain EXH44_00520 PF16527 Two-component sensor protein CpxA, periplasmic domain EXH44_00525 PF02028 BCCT, betaine/carnitine/choline family transporter EXH44_00530 PF02028 BCCT, betaine/carnitine/choline family transporter EXH44_00535 PF02687 FtsX-like permease family EXH44_00535 PF00005 ABC transporter EXH44_00535 PF12704 MacB-like periplasmic core domain EXH44_00540 PF01784 NIF3 (NGG1p interacting factor 3) EXH44_00550 PF00588 SpoU rRNA Methylase family EXH44_00555 PF07411 Domain of unknown function (DUF1508) EXH44_00560 PF13635 Domain of unknown function (DUF4143) EXH44_00560 PF13173 AAA domain EXH44_00570 PF12344 Ultra-violet resistance protein B EXH44_00570 PF00271 Helicase conserved C-terminal domain EXH44_00570 PF17757 UvrB interaction domain EXH44_00570 PF02151 UvrB/uvrC motif EXH44_00570 PF04851 Type III restriction enzyme, res subunit EXH44_00575 PF04055 Radical SAM superfamily EXH44_00585 PF01132 Elongation factor P (EF-P) OB domain EXH44_00585 PF08207 Elongation factor P (EF-P) KOW-like domain EXH44_00585 PF09285 Elongation factor P, C-terminal EXH44_00590 PF06005 Cell division protein ZapB EXH44_00595 PF00265 Thymidine kinase EXH44_00600 PF00027 Cyclic nucleotide-binding domain EXH44_00600 PF00325 Bacterial regulatory proteins, crp family EXH44_00605 PF00884 Sulfatase EXH44_00610 PF03476 MOSC N-terminal beta barrel domain EXH44_00610 PF03473 MOSC domain EXH44_00610 PF00111 2Fe-2S iron-sulfur cluster binding domain EXH44_00615 PF02609 Exonuclease VII small subunit EXH44_00620 PF00348 Polyprenyl synthetase EXH44_00625 PF00004 ATPase family associated with various cellular activities (AAA) EXH44_00625 PF17862 AAA+ lid domain EXH44_00625 PF06480 FtsH Extracellular EXH44_00625 PF01434 Peptidase family M41 EXH44_00630 PF01728 FtsJ-like methyltransferase EXH44_00640 PF00575 S1 RNA binding domain EXH44_00640 PF00773 RNB domain EXH44_00640 PF08206 Ribonuclease B OB domain EXH44_00640 PF17876 Cold shock domain EXH44_00645 PF00149 Calcineurin-like phosphoesterase EXH44_00655 PF03922 OmpW family EXH44_00660 PF00849 RNA pseudouridylate synthase EXH44_00665 PF00300 Histidine phosphatase superfamily (branch 1) EXH44_00670 PF13580 SIS domain EXH44_00675 PF03702 Anhydro-N-acetylmuramic acid kinase EXH44_00680 PF03449 Transcription elongation factor, N-terminal EXH44_00680 PF01272 Transcription elongation factor, GreA/GreB, C-term EXH44_00685 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EXH44_00695 PF00701 Dihydrodipicolinate synthetase family EXH44_00710 PF00691 OmpA family EXH44_00710 PF01389 OmpA-like transmembrane domain EXH44_00715 PF17768 RecJ OB domain EXH44_00715 PF02272 DHHA1 domain EXH44_00715 PF01368 DHH family EXH44_00720 PF10411 Disulfide bond isomerase protein N-terminus EXH44_00720 PF13098 Thioredoxin-like domain EXH44_00725 PF04225 Opacity-associated protein A LysM-like domain EXH44_00725 PF01551 Peptidase family M23 EXH44_00730 PF00005 ABC transporter EXH44_00735 PF00950 ABC 3 transport family EXH44_00740 PF13230 Glutamine amidotransferases class-II EXH44_00745 PF00004 ATPase family associated with various cellular activities (AAA) EXH44_00745 PF02190 ATP-dependent protease La (LON) substrate-binding domain EXH44_00745 PF05362 Lon protease (S16) C-terminal proteolytic domain EXH44_00750 PF04356 Protein of unknown function (DUF489) EXH44_00755 PF08328 Adenylosuccinate lyase C-terminal EXH44_00755 PF00206 Lyase EXH44_00760 PF08220 DeoR-like helix-turn-helix domain EXH44_00760 PF00455 DeoR C terminal sensor domain EXH44_00765 PF01040 UbiA prenyltransferase family EXH44_00815 PF13700 Domain of unknown function (DUF4158) EXH44_00815 PF01526 Tn3 transposase DDE domain EXH44_00820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EXH44_00850 PF02909 Tetracyclin repressor-like, C-terminal domain EXH44_00850 PF00440 Bacterial regulatory proteins, tetR family EXH44_00855 PF07690 Major Facilitator Superfamily EXH44_00860 PF13936 Helix-turn-helix domain EXH44_00860 PF00665 Integrase core domain EXH44_00865 PF00364 Biotin-requiring enzyme EXH44_00890 PF00809 Pterin binding enzyme EXH44_00895 PF00302 Chloramphenicol acetyltransferase EXH44_00900 PF01636 Phosphotransferase enzyme family EXH44_00910 PF02522 Aminoglycoside 3-N-acetyltransferase EXH44_00920 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase EXH44_00925 PF01636 Phosphotransferase enzyme family EXH44_00940 PF13936 Helix-turn-helix domain EXH44_00940 PF00665 Integrase core domain EXH44_00950 PF01909 Nucleotidyltransferase domain EXH44_00950 PF13427 Domain of unknown function (DUF4111) EXH44_00965 PF00665 Integrase core domain EXH44_00965 PF13936 Helix-turn-helix domain EXH44_00980 PF00589 Phage integrase family EXH44_00980 PF02899 Phage integrase, N-terminal SAM-like domain EXH44_00990 PF00589 Phage integrase family EXH44_00995 PF08003 Protein of unknown function (DUF1698) EXH44_01000 PF02551 Acyl-CoA thioesterase EXH44_01010 PF13609 Gram-negative porin EXH44_01020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EXH44_01025 PF03880 DbpA RNA binding domain EXH44_01025 PF00270 DEAD/DEAH box helicase EXH44_01025 PF00271 Helicase conserved C-terminal domain EXH44_01035 PF01138 3' exoribonuclease family, domain 1 EXH44_01035 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EXH44_01035 PF00013 KH domain EXH44_01035 PF03725 3' exoribonuclease family, domain 2 EXH44_01035 PF00575 S1 RNA binding domain EXH44_01040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_01045 PF01791 DeoC/LacD family aldolase EXH44_01055 PF01301 Glycosyl hydrolases family 35 EXH44_01065 PF03613 PTS system mannose/fructose/sorbose family IID component EXH44_01070 PF03609 PTS system sorbose-specific iic component EXH44_01075 PF03830 PTS system sorbose subfamily IIB component EXH44_01080 PF01380 SIS domain EXH44_01085 PF00455 DeoR C terminal sensor domain EXH44_01085 PF08220 DeoR-like helix-turn-helix domain EXH44_01090 PF01523 Putative modulator of DNA gyrase EXH44_01095 PF04751 Protein of unknown function (DUF615) EXH44_01100 PF04247 Invasion gene expression up-regulator, SirB EXH44_01105 PF01293 Phosphoenolpyruvate carboxykinase EXH44_01110 PF04977 Septum formation initiator EXH44_01115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EXH44_01120 PF02542 YgbB family EXH44_01125 PF03889 Alternative ribosome-rescue factor A EXH44_01130 PF13649 Methyltransferase domain EXH44_01135 PF01594 AI-2E family transporter EXH44_01140 PF01933 Uncharacterised protein family UPF0052 EXH44_01145 PF02547 Queuosine biosynthesis protein EXH44_01150 PF01381 Helix-turn-helix EXH44_01155 PF05973 Phage derived protein Gp49-like (DUF891) EXH44_01160 PF00753 Metallo-beta-lactamase superfamily EXH44_01160 PF13567 Domain of unknown function (DUF4131) EXH44_01160 PF03772 Competence protein EXH44_01165 PF00375 Sodium:dicarboxylate symporter family EXH44_01170 PF01219 Prokaryotic diacylglycerol kinase EXH44_01180 PF00149 Calcineurin-like phosphoesterase EXH44_01180 PF02872 5'-nucleotidase, C-terminal domain EXH44_01185 PF01966 HD domain EXH44_01185 PF08335 GlnD PII-uridylyltransferase EXH44_01190 PF03550 Outer membrane lipoprotein LolB EXH44_01195 PF00288 GHMP kinases N terminal domain EXH44_01195 PF08544 GHMP kinases C terminal EXH44_01200 PF14572 Phosphoribosyl synthetase-associated domain EXH44_01200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EXH44_01205 PF01180 Dihydroorotate dehydrogenase EXH44_01210 PF02589 LUD domain EXH44_01215 PF11870 Domain of unknown function (DUF3390) EXH44_01215 PF13183 4Fe-4S dicluster domain EXH44_01215 PF02589 LUD domain EXH44_01220 PF02754 Cysteine-rich domain EXH44_01225 PF00186 Dihydrofolate reductase EXH44_01230 PF00696 Amino acid kinase family EXH44_01230 PF01472 PUA domain EXH44_01235 PF01925 Sulfite exporter TauE/SafE EXH44_01240 PF10576 Iron-sulfur binding domain of endonuclease III EXH44_01240 PF00633 Helix-hairpin-helix motif EXH44_01240 PF00730 HhH-GPD superfamily base excision DNA repair protein EXH44_01245 PF01751 Toprim domain EXH44_01245 PF01131 DNA topoisomerase EXH44_01245 PF08272 Topoisomerase I zinc-ribbon-like EXH44_01245 PF01396 Topoisomerase DNA binding C4 zinc finger EXH44_01250 PF03466 LysR substrate binding domain EXH44_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_01255 PF00005 ABC transporter EXH44_01255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_01260 PF12911 N-terminal TM domain of oligopeptide transport permease C EXH44_01260 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_01265 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_01270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_01275 PF18024 Helix-turn-helix domain EXH44_01275 PF00158 Sigma-54 interaction domain EXH44_01280 PF00768 D-alanyl-D-alanine carboxypeptidase EXH44_01285 PF00696 Amino acid kinase family EXH44_01290 PF00884 Sulfatase EXH44_01295 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EXH44_01295 PF14489 QueF-like protein EXH44_01300 PF03895 YadA-like membrane anchor domain EXH44_01300 PF03895 YadA-like membrane anchor domain EXH44_01300 PF05662 Coiled stalk of trimeric autotransporter adhesin EXH44_01300 PF05662 Coiled stalk of trimeric autotransporter adhesin EXH44_01300 PF13018 Extended Signal Peptide of Type V secretion system EXH44_01300 PF13018 Extended Signal Peptide of Type V secretion system EXH44_01300 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin EXH44_01300 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin EXH44_01310 PF00578 AhpC/TSA family EXH44_01315 PF04055 Radical SAM superfamily EXH44_01315 PF06969 HemN C-terminal domain EXH44_01320 PF03313 Serine dehydratase alpha chain EXH44_01320 PF03315 Serine dehydratase beta chain EXH44_01325 PF03222 Tryptophan/tyrosine permease family EXH44_01330 PF09190 DALR domain EXH44_01330 PF01406 tRNA synthetases class I (C) catalytic domain EXH44_01335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EXH44_01340 PF02872 5'-nucleotidase, C-terminal domain EXH44_01340 PF00149 Calcineurin-like phosphoesterase EXH44_01345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EXH44_01345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EXH44_01355 PF07119 Protein of unknown function (DUF1375) EXH44_01360 PF00180 Isocitrate/isopropylmalate dehydrogenase EXH44_01365 PF00005 ABC transporter EXH44_01365 PF00664 ABC transporter transmembrane region EXH44_01370 PF00664 ABC transporter transmembrane region EXH44_01370 PF00005 ABC transporter EXH44_01375 PF04357 TamB, inner membrane protein subunit of TAM complex EXH44_01380 PF17243 POTRA domain TamA domain 1 EXH44_01380 PF01103 Surface antigen EXH44_01385 PF04748 Divergent polysaccharide deacetylase EXH44_01390 PF01551 Peptidase family M23 EXH44_01395 PF00501 AMP-binding enzyme EXH44_01395 PF13193 AMP-binding enzyme C-terminal domain EXH44_01405 PF03888 MucB/RseB N-terminal domain EXH44_01405 PF17188 MucB/RseB C-terminal domain EXH44_01415 PF08335 GlnD PII-uridylyltransferase EXH44_01415 PF03710 Glutamate-ammonia ligase adenylyltransferase EXH44_01420 PF03795 YCII-related domain EXH44_01425 PF03061 Thioesterase superfamily EXH44_01430 PF04279 Intracellular septation protein A EXH44_01440 PF04217 Protein of unknown function, DUF412 EXH44_01445 PF00300 Histidine phosphatase superfamily (branch 1) EXH44_01450 PF00764 Arginosuccinate synthase EXH44_01460 PF01641 SelR domain EXH44_01465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EXH44_01465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EXH44_01480 PF03477 ATP cone domain EXH44_01485 PF05166 YcgL domain EXH44_01490 PF03796 DnaB-like helicase C terminal domain EXH44_01490 PF00772 DnaB-like helicase N terminal domain EXH44_01495 PF02811 PHP domain EXH44_01505 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase EXH44_01510 PF00929 Exonuclease EXH44_01510 PF08411 Exonuclease C-terminal EXH44_01515 PF01061 ABC-2 type transporter EXH44_01520 PF00005 ABC transporter EXH44_01525 PF12170 DNA polymerase III tau subunit V interacting with alpha EXH44_01525 PF12169 DNA polymerase III subunits gamma and tau domain III EXH44_01530 PF00156 Phosphoribosyl transferase domain EXH44_01535 PF12832 MFS_1 like family EXH44_01540 PF14748 Pyrroline-5-carboxylate reductase dimerisation EXH44_01540 PF03807 NADP oxidoreductase coenzyme F420-dependent EXH44_01545 PF04381 Putative exonuclease, RdgC EXH44_01550 PF12627 Probable RNA and SrmB- binding site of polymerase A EXH44_01550 PF01743 Poly A polymerase head domain EXH44_01550 PF01966 HD domain EXH44_01555 PF04384 Iron-sulphur cluster assembly EXH44_01560 PF00111 2Fe-2S iron-sulfur cluster binding domain EXH44_01565 PF00012 Hsp70 protein EXH44_01570 PF10946 Protein of unknown function DUF2625 EXH44_01580 PF07743 HSCB C-terminal oligomerisation domain EXH44_01585 PF01521 Iron-sulphur cluster biosynthesis EXH44_01590 PF01592 NifU-like N terminal domain EXH44_01595 PF00266 Aminotransferase class-V EXH44_01600 PF02082 Transcriptional regulator EXH44_01605 PF04175 Protein of unknown function (DUF406) EXH44_01610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EXH44_01615 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EXH44_01615 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EXH44_01620 PF01053 Cys/Met metabolism PLP-dependent enzyme EXH44_01625 PF00860 Permease family EXH44_01630 PF00290 Tryptophan synthase alpha chain EXH44_01635 PF00291 Pyridoxal-phosphate dependent enzyme EXH44_01640 PF00106 short chain dehydrogenase EXH44_01645 PF03692 Putative zinc- or iron-chelating domain EXH44_01650 PF01906 Putative heavy-metal-binding EXH44_01655 PF01725 Ham1 family EXH44_01660 PF03279 Bacterial lipid A biosynthesis acyltransferase EXH44_01670 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EXH44_01675 PF01416 tRNA pseudouridine synthase EXH44_01680 PF01227 GTP cyclohydrolase I EXH44_01690 PF09383 NIL domain EXH44_01690 PF00005 ABC transporter EXH44_01695 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_01700 PF03180 NLPA lipoprotein EXH44_01705 PF12762 ISXO2-like transposase domain EXH44_01710 PF03180 NLPA lipoprotein EXH44_01715 PF03180 NLPA lipoprotein EXH44_01725 PF09827 CRISPR associated protein Cas2 EXH44_01730 PF01867 CRISPR associated protein Cas1 EXH44_01735 PF18541 RuvC endonuclease subdomain 3 EXH44_01735 PF13395 HNH endonuclease EXH44_01735 PF18470 Cas9 alpha-helical lobe domain EXH44_01740 PF16193 AAA C-terminal domain EXH44_01740 PF00004 ATPase family associated with various cellular activities (AAA) EXH44_01740 PF12002 MgsA AAA+ ATPase C terminal EXH44_01745 PF04093 rod shape-determining protein MreD EXH44_01750 PF04085 rod shape-determining protein MreC EXH44_01760 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EXH44_01760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EXH44_01760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EXH44_01765 PF02233 NAD(P) transhydrogenase beta subunit EXH44_01775 PF00999 Sodium/hydrogen exchanger family EXH44_01775 PF02254 TrkA-N domain EXH44_01780 PF05726 Pirin C-terminal cupin domain EXH44_01780 PF02678 Pirin EXH44_01790 PF13936 Helix-turn-helix domain EXH44_01790 PF00665 Integrase core domain EXH44_01795 PF00300 Histidine phosphatase superfamily (branch 1) EXH44_01800 PF02887 Pyruvate kinase, alpha/beta domain EXH44_01800 PF00224 Pyruvate kinase, barrel domain EXH44_01805 PF13538 UvrD-like helicase C-terminal domain EXH44_01810 PF01740 STAS domain EXH44_01810 PF00916 Sulfate permease family EXH44_01815 PF01292 Prokaryotic cytochrome b561 EXH44_01825 PF07687 Peptidase dimerisation domain EXH44_01825 PF01546 Peptidase family M20/M25/M40 EXH44_01830 PF03972 MmgE/PrpD family EXH44_01835 PF00005 ABC transporter EXH44_01840 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_01845 PF00497 Bacterial extracellular solute-binding proteins, family 3 EXH44_01855 PF10397 Adenylosuccinate lyase C-terminus EXH44_01855 PF00206 Lyase EXH44_01865 PF03466 LysR substrate binding domain EXH44_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_01870 PF13419 Haloacid dehalogenase-like hydrolase EXH44_01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_01875 PF03466 LysR substrate binding domain EXH44_01880 PF01063 Amino-transferase class IV EXH44_01885 PF01042 Endoribonuclease L-PSP EXH44_01895 PF02075 Crossover junction endodeoxyribonuclease RuvC EXH44_01900 PF12762 ISXO2-like transposase domain EXH44_01915 PF01709 Transcriptional regulator EXH44_01920 PF00293 NUDIX domain EXH44_01930 PF01336 OB-fold nucleic acid binding domain EXH44_01930 PF02938 GAD domain EXH44_01930 PF00152 tRNA synthetases class II (D, K and N) EXH44_01935 PF01025 GrpE EXH44_01945 PF04284 Protein of unknown function (DUF441) EXH44_01950 PF00270 DEAD/DEAH box helicase EXH44_01950 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EXH44_01950 PF00271 Helicase conserved C-terminal domain EXH44_01950 PF04408 Helicase associated domain (HA2) EXH44_01950 PF11898 Domain of unknown function (DUF3418) EXH44_01955 PF00989 PAS fold EXH44_01955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_01955 PF01627 Hpt domain EXH44_01955 PF00512 His Kinase A (phospho-acceptor) domain EXH44_01955 PF18415 Histidine kinase receptor ArcB trans-membrane domain EXH44_01955 PF00072 Response regulator receiver domain EXH44_01965 PF01713 Smr domain EXH44_01970 PF05175 Methyltransferase small domain EXH44_01975 PF00311 Phosphoenolpyruvate carboxylase EXH44_01980 PF18073 Rubredoxin metal binding domain EXH44_01985 PF07963 Prokaryotic N-terminal methylation motif EXH44_01990 PF00437 Type II/IV secretion system protein EXH44_01990 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EXH44_01995 PF00482 Type II secretion system (T2SS), protein F EXH44_02005 PF01121 Dephospho-CoA kinase EXH44_02010 PF03884 DNA gyrase inhibitor YacG EXH44_02015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EXH44_02015 PF00132 Bacterial transferase hexapeptide (six repeats) EXH44_02020 PF07977 FabA-like domain EXH44_02025 PF00132 Bacterial transferase hexapeptide (six repeats) EXH44_02025 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EXH44_02035 PF01103 Surface antigen EXH44_02035 PF07244 Surface antigen variable number repeat EXH44_02040 PF02163 Peptidase family M50 EXH44_02050 PF01255 Putative undecaprenyl diphosphate synthase EXH44_02055 PF00753 Metallo-beta-lactamase superfamily EXH44_02055 PF16123 Hydroxyacylglutathione hydrolase C-terminus EXH44_02060 PF00480 ROK family EXH44_02065 PF01569 PAP2 superfamily EXH44_02070 PF01985 CRS1 / YhbY (CRM) domain EXH44_02075 PF00535 Glycosyl transferase family 2 EXH44_02080 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EXH44_02085 PF02780 Transketolase, C-terminal domain EXH44_02085 PF00456 Transketolase, thiamine diphosphate binding domain EXH44_02085 PF02779 Transketolase, pyrimidine binding domain EXH44_02090 PF01197 Ribosomal protein L31 EXH44_02095 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) EXH44_02105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EXH44_02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_02110 PF03466 LysR substrate binding domain EXH44_02130 PF04011 LemA family EXH44_02135 PF05128 Domain of unknown function (DUF697) EXH44_02140 PF01207 Dihydrouridine synthase (Dus) EXH44_02150 PF00226 DnaJ domain EXH44_02150 PF05099 Tellurite resistance protein TerB EXH44_02155 PF00691 OmpA family EXH44_02160 PF04052 TolB amino-terminal domain EXH44_02160 PF07676 WD40-like Beta Propeller Repeat EXH44_02165 PF06519 TolA C-terminal EXH44_02165 PF06519 TolA C-terminal EXH44_02170 PF02472 Biopolymer transport protein ExbD/TolR EXH44_02175 PF01618 MotA/TolQ/ExbB proton channel family EXH44_02180 PF03061 Thioesterase superfamily EXH44_02195 PF02322 Cytochrome bd terminal oxidase subunit II EXH44_02200 PF01654 Cytochrome bd terminal oxidase subunit I EXH44_02205 PF17274 Family of unknown function (DUF5339) EXH44_02210 PF07219 HemY protein N-terminus EXH44_02215 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EXH44_02220 PF02602 Uroporphyrinogen-III synthase HemD EXH44_02225 PF03900 Porphobilinogen deaminase, C-terminal domain EXH44_02225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EXH44_02230 PF01235 Sodium:alanine symporter family EXH44_02235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_02235 PF00005 ABC transporter EXH44_02240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_02240 PF00005 ABC transporter EXH44_02245 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02245 PF12911 N-terminal TM domain of oligopeptide transport permease C EXH44_02250 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_02265 PF17864 RuvB AAA lid domain EXH44_02265 PF05491 RuvB C-terminal winged helix domain EXH44_02265 PF05496 Holliday junction DNA helicase RuvB P-loop domain EXH44_02270 PF07499 RuvA, C-terminal domain EXH44_02270 PF01330 RuvA N terminal domain EXH44_02275 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02280 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02285 PF08402 TOBE domain EXH44_02285 PF00005 ABC transporter EXH44_02290 PF00929 Exonuclease EXH44_02295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EXH44_02300 PF01032 FecCD transport family EXH44_02305 PF00005 ABC transporter EXH44_02320 PF11739 Dicarboxylate transport EXH44_02350 PF01370 NAD dependent epimerase/dehydratase family EXH44_02350 PF02222 ATP-grasp domain EXH44_02355 PF17674 HHH domain EXH44_02355 PF09371 Tex-like protein N-terminal domain EXH44_02355 PF16921 Tex protein YqgF-like domain EXH44_02355 PF00575 S1 RNA binding domain EXH44_02360 PF00892 EamA-like transporter family EXH44_02370 PF02463 RecF/RecN/SMC N terminal domain EXH44_02375 PF00293 NUDIX domain EXH44_02380 PF02810 SEC-C motif EXH44_02380 PF07516 SecA Wing and Scaffold domain EXH44_02380 PF01043 SecA preprotein cross-linking domain EXH44_02380 PF07517 SecA DEAD-like domain EXH44_02405 PF01722 BolA-like protein EXH44_02410 PF03923 Uncharacterized lipoprotein EXH44_02415 PF04452 RNA methyltransferase EXH44_02420 PF02622 Uncharacterized ACR, COG1678 EXH44_02425 PF03652 Holliday junction resolvase EXH44_02430 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) EXH44_02435 PF02699 Preprotein translocase subunit EXH44_02440 PF13721 SecD export protein N-terminal TM region EXH44_02440 PF07549 SecD/SecF GG Motif EXH44_02440 PF02355 Protein export membrane protein EXH44_02445 PF02355 Protein export membrane protein EXH44_02445 PF07549 SecD/SecF GG Motif EXH44_02480 PF02678 Pirin EXH44_02480 PF05726 Pirin C-terminal cupin domain EXH44_02485 PF06508 Queuosine biosynthesis protein QueC EXH44_02490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EXH44_02490 PF07992 Pyridine nucleotide-disulphide oxidoreductase EXH44_02495 PF03350 Uncharacterized protein family, UPF0114 EXH44_02500 PF01370 NAD dependent epimerase/dehydratase family EXH44_02505 PF00881 Nitroreductase family EXH44_02510 PF00005 ABC transporter EXH44_02515 PF01116 Fructose-bisphosphate aldolase class-II EXH44_02520 PF00162 Phosphoglycerate kinase EXH44_02525 PF00939 Sodium:sulfate symporter transmembrane region EXH44_02530 PF00665 Integrase core domain EXH44_02530 PF13936 Helix-turn-helix domain EXH44_02535 PF04995 Heme exporter protein D (CcmD) EXH44_02540 PF01578 Cytochrome C assembly protein EXH44_02545 PF03379 CcmB protein EXH44_02550 PF00005 ABC transporter EXH44_02555 PF00308 Bacterial dnaA protein EXH44_02560 PF04973 Nicotinamide mononucleotide transporter EXH44_02565 PF09976 Tetratricopeptide repeat-like domain EXH44_02570 PF03129 Anticodon binding domain EXH44_02570 PF13393 Histidyl-tRNA synthetase EXH44_02575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EXH44_02575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EXH44_02580 PF04551 GcpE protein EXH44_02585 PF13464 Domain of unknown function (DUF4115) EXH44_02590 PF01343 Peptidase family S49 EXH44_02595 PF00881 Nitroreductase family EXH44_02600 PF04315 Elongation factor P hydroxylase EXH44_02605 PF02348 Cytidylyltransferase EXH44_02610 PF04333 MlaA lipoprotein EXH44_02615 PF00753 Metallo-beta-lactamase superfamily EXH44_02620 PF05951 Bacterial protein of unknown function (DUF882) EXH44_02625 PF03734 L,D-transpeptidase catalytic domain EXH44_02630 PF17804 Tail specific protease N-terminal domain EXH44_02630 PF03572 Peptidase family S41 EXH44_02630 PF00595 PDZ domain EXH44_02630 PF11818 C-terminal domain of tail specific protease (DUF3340) EXH44_02635 PF04352 ProQ/FINO family EXH44_02640 PF00313 'Cold-shock' DNA-binding domain EXH44_02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase EXH44_02660 PF00056 lactate/malate dehydrogenase, NAD binding domain EXH44_02660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EXH44_02665 PF02863 Arginine repressor, C-terminal domain EXH44_02665 PF01316 Arginine repressor, DNA binding domain EXH44_02670 PF08338 Domain of unknown function (DUF1731) EXH44_02670 PF01370 NAD dependent epimerase/dehydratase family EXH44_02675 PF00117 Glutamine amidotransferase class-I EXH44_02675 PF06418 CTP synthase N-terminus EXH44_02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_02680 PF03466 LysR substrate binding domain EXH44_02685 PF01243 Pyridoxamine 5'-phosphate oxidase EXH44_02690 PF00209 Sodium:neurotransmitter symporter family EXH44_02695 PF02086 D12 class N6 adenine-specific DNA methyltransferase EXH44_02700 PF01761 3-dehydroquinate synthase EXH44_02705 PF01202 Shikimate kinase EXH44_02710 PF00905 Penicillin binding protein transpeptidase domain EXH44_02710 PF00912 Transglycosylase EXH44_02710 PF17092 Penicillin-binding protein OB-like domain EXH44_02735 PF03958 Bacterial type II/III secretion system short domain EXH44_02735 PF00263 Bacterial type II and III secretion system protein EXH44_02740 PF01029 NusB family EXH44_02745 PF02769 AIR synthase related protein, C-terminal domain EXH44_02745 PF00586 AIR synthase related protein, N-terminal domain EXH44_02750 PF04608 Phosphatidylglycerophosphatase A EXH44_02755 PF01810 LysE type translocator EXH44_02760 PF00356 Bacterial regulatory proteins, lacI family EXH44_02765 PF16036 Chalcone isomerase-like EXH44_02770 PF04325 Protein of unknown function (DUF465) EXH44_02775 PF00691 OmpA family EXH44_02775 PF01389 OmpA-like transmembrane domain EXH44_02780 PF00580 UvrD/REP helicase N-terminal domain EXH44_02780 PF13361 UvrD-like helicase C-terminal domain EXH44_02785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EXH44_02785 PF02844 Phosphoribosylglycinamide synthetase, N domain EXH44_02785 PF02843 Phosphoribosylglycinamide synthetase, C domain EXH44_02790 PF00293 NUDIX domain EXH44_02790 PF09297 NADH pyrophosphatase zinc ribbon domain EXH44_02795 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02800 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02805 PF00497 Bacterial extracellular solute-binding proteins, family 3 EXH44_02810 PF00005 ABC transporter EXH44_02815 PF00005 ABC transporter EXH44_02815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_02820 PF00005 ABC transporter EXH44_02820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_02825 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02825 PF12911 N-terminal TM domain of oligopeptide transport permease C EXH44_02830 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_02840 PF05191 Adenylate kinase, active site lid EXH44_02845 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) EXH44_02850 PF00113 Enolase, C-terminal TIM barrel domain EXH44_02850 PF03952 Enolase, N-terminal domain EXH44_02860 PF02627 Carboxymuconolactone decarboxylase family EXH44_02865 PF00005 ABC transporter EXH44_02870 PF02687 FtsX-like permease family EXH44_02870 PF12704 MacB-like periplasmic core domain EXH44_02880 PF00120 Glutamine synthetase, catalytic domain EXH44_02880 PF03951 Glutamine synthetase, beta-Grasp domain EXH44_02885 PF01938 TRAM domain EXH44_02885 PF05958 tRNA (Uracil-5-)-methyltransferase EXH44_02890 PF13286 Phosphohydrolase-associated domain EXH44_02890 PF01966 HD domain EXH44_02900 PF00176 SNF2 family N-terminal domain EXH44_02900 PF18339 RapA N-terminal Tudor like domain 1 EXH44_02900 PF18337 RapA N-terminal Tudor like domain EXH44_02900 PF12137 RNA polymerase recycling family C-terminal EXH44_02900 PF00271 Helicase conserved C-terminal domain EXH44_02905 PF11941 Domain of unknown function (DUF3459) EXH44_02905 PF00128 Alpha amylase, catalytic domain EXH44_02910 PF02378 Phosphotransferase system, EIIC EXH44_02910 PF00367 phosphotransferase system, EIIB EXH44_02915 PF02132 RecR protein EXH44_02915 PF13662 Toprim domain EXH44_02920 PF02575 YbaB/EbfC DNA-binding family EXH44_02925 PF02535 ZIP Zinc transporter EXH44_02935 PF00920 Dehydratase family EXH44_02940 PF00580 UvrD/REP helicase N-terminal domain EXH44_02940 PF13361 UvrD-like helicase C-terminal domain EXH44_02945 PF12705 PD-(D/E)XK nuclease superfamily EXH44_02945 PF00580 UvrD/REP helicase N-terminal domain EXH44_02945 PF13361 UvrD-like helicase C-terminal domain EXH44_02950 PF02446 4-alpha-glucanotransferase EXH44_02955 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02960 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_02960 PF14785 Maltose transport system permease protein MalF P2 domain EXH44_02965 PF01547 Bacterial extracellular solute-binding protein EXH44_02970 PF00005 ABC transporter EXH44_02970 PF17912 MalK OB fold domain EXH44_02975 PF02264 LamB porin EXH44_02980 PF07148 Maltose operon periplasmic protein precursor (MalM) EXH44_02985 PF00128 Alpha amylase, catalytic domain EXH44_02990 PF00462 Glutaredoxin EXH44_03000 PF02664 S-Ribosylhomocysteinase (LuxS) EXH44_03005 PF00005 ABC transporter EXH44_03005 PF00664 ABC transporter transmembrane region EXH44_03010 PF00497 Bacterial extracellular solute-binding proteins, family 3 EXH44_03010 PF01464 Transglycosylase SLT domain EXH44_03020 PF07233 Protein of unknown function (DUF1425) EXH44_03025 PF01230 HIT domain EXH44_03030 PF04191 Phospholipid methyltransferase EXH44_03035 PF00793 DAHP synthetase I family EXH44_03040 PF13369 Transglutaminase-like superfamily EXH44_03045 PF17827 PrmC N-terminal domain EXH44_03045 PF13847 Methyltransferase domain EXH44_03050 PF00472 RF-1 domain EXH44_03050 PF03462 PCRF domain EXH44_03055 PF00216 Bacterial DNA-binding protein EXH44_03060 PF04222 Protein of unknown function (DUF416) EXH44_03065 PF01208 Uroporphyrinogen decarboxylase (URO-D) EXH44_03070 PF01263 Aldose 1-epimerase EXH44_03075 PF00206 Lyase EXH44_03075 PF14698 Argininosuccinate lyase C-terminal EXH44_03080 PF00557 Metallopeptidase family M24 EXH44_03085 PF01206 Sulfurtransferase TusA EXH44_03090 PF06877 Regulator of ribonuclease activity B EXH44_03095 PF01926 50S ribosome-binding GTPase EXH44_03105 PF01433 Peptidase family M1 domain EXH44_03105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EXH44_03105 PF11940 Domain of unknown function (DUF3458) Ig-like fold EXH44_03110 PF01168 Alanine racemase, N-terminal domain EXH44_03120 PF00986 DNA gyrase B subunit, carboxyl terminus EXH44_03120 PF01751 Toprim domain EXH44_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_03120 PF00204 DNA gyrase B EXH44_03125 PF00376 MerR family regulatory protein EXH44_03125 PF09278 MerR, DNA binding EXH44_03130 PF00403 Heavy-metal-associated domain EXH44_03135 PF00403 Heavy-metal-associated domain EXH44_03140 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EXH44_03145 PF00091 Tubulin/FtsZ family, GTPase domain EXH44_03145 PF12327 FtsZ family, C-terminal domain EXH44_03150 PF02491 SHS2 domain inserted in FTSA EXH44_03155 PF08478 POTRA domain, FtsQ-type EXH44_03155 PF03799 Cell division protein FtsQ EXH44_03160 PF07478 D-ala D-ala ligase C-terminus EXH44_03160 PF01820 D-ala D-ala ligase N-terminus EXH44_03165 PF08245 Mur ligase middle domain EXH44_03165 PF02875 Mur ligase family, glutamate ligase domain EXH44_03165 PF01225 Mur ligase family, catalytic domain EXH44_03170 PF04101 Glycosyltransferase family 28 C-terminal domain EXH44_03170 PF03033 Glycosyltransferase family 28 N-terminal domain EXH44_03175 PF01098 Cell cycle protein EXH44_03180 PF02875 Mur ligase family, glutamate ligase domain EXH44_03180 PF08245 Mur ligase middle domain EXH44_03185 PF00953 Glycosyl transferase family 4 EXH44_03185 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EXH44_03190 PF01225 Mur ligase family, catalytic domain EXH44_03190 PF02875 Mur ligase family, glutamate ligase domain EXH44_03190 PF08245 Mur ligase middle domain EXH44_03205 PF01225 Mur ligase family, catalytic domain EXH44_03205 PF08245 Mur ligase middle domain EXH44_03205 PF02875 Mur ligase family, glutamate ligase domain EXH44_03210 PF00905 Penicillin binding protein transpeptidase domain EXH44_03210 PF03717 Penicillin-binding Protein dimerisation domain EXH44_03215 PF04999 Cell division protein FtsL EXH44_03220 PF01795 MraW methylase family EXH44_03225 PF02381 MraZ protein, putative antitoxin-like EXH44_03230 PF00392 Bacterial regulatory proteins, gntR family EXH44_03230 PF07840 FadR C-terminal domain EXH44_03235 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EXH44_03240 PF02600 Disulfide bond formation protein DsbB EXH44_03245 PF01588 Putative tRNA binding domain EXH44_03245 PF09334 tRNA synthetases class I (M) EXH44_03250 PF00334 Nucleoside diphosphate kinase EXH44_03255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EXH44_03255 PF00381 PTS HPr component phosphorylation site EXH44_03260 PF00294 pfkB family carbohydrate kinase EXH44_03265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EXH44_03270 PF00571 CBS domain EXH44_03270 PF01380 SIS domain EXH44_03275 PF03449 Transcription elongation factor, N-terminal EXH44_03275 PF01272 Transcription elongation factor, GreA/GreB, C-term EXH44_03280 PF02470 MlaD protein EXH44_03285 PF01475 Ferric uptake regulator family EXH44_03290 PF00258 Flavodoxin EXH44_03295 PF01402 Ribbon-helix-helix protein, copG family EXH44_03305 PF00156 Phosphoribosyl transferase domain EXH44_03310 PF01026 TatD related DNase EXH44_03315 PF02554 Carbon starvation protein CstA EXH44_03325 PF02322 Cytochrome bd terminal oxidase subunit II EXH44_03330 PF01654 Cytochrome bd terminal oxidase subunit I EXH44_03335 PF00595 PDZ domain EXH44_03340 PF04055 Radical SAM superfamily EXH44_03340 PF06968 Biotin and Thiamin Synthesis associated domain EXH44_03345 PF00849 RNA pseudouridylate synthase EXH44_03345 PF01479 S4 domain EXH44_03350 PF01300 Telomere recombination EXH44_03355 PF00425 chorismate binding enzyme EXH44_03355 PF04715 Anthranilate synthase component I, N terminal region EXH44_03360 PF00117 Glutamine amidotransferase class-I EXH44_03365 PF02885 Glycosyl transferase family, helical bundle domain EXH44_03365 PF00591 Glycosyl transferase family, a/b domain EXH44_03375 PF05661 Protein of unknown function (DUF808) EXH44_03395 PF01266 FAD dependent oxidoreductase EXH44_03400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EXH44_03405 PF01722 BolA-like protein EXH44_03415 PF05494 MlaC protein EXH44_03420 PF02470 MlaD protein EXH44_03425 PF02405 Permease MlaE EXH44_03430 PF00005 ABC transporter EXH44_03435 PF04972 BON domain EXH44_03440 PF13580 SIS domain EXH44_03445 PF02021 Uncharacterised protein family UPF0102 EXH44_03450 PF04348 LppC putative lipoprotein EXH44_03455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EXH44_03460 PF00210 Ferritin-like domain EXH44_03465 PF13091 PLD-like domain EXH44_03470 PF06827 Zinc finger found in FPG and IleRS EXH44_03470 PF00133 tRNA synthetases class I (I, L, M and V) EXH44_03470 PF08264 Anticodon-binding domain of tRNA EXH44_03475 PF06574 FAD synthetase EXH44_03475 PF01687 Riboflavin kinase EXH44_03505 PF14743 DNA ligase OB-like domain EXH44_03505 PF01068 ATP dependent DNA ligase domain EXH44_03515 PF04277 Oxaloacetate decarboxylase, gamma chain EXH44_03520 PF00364 Biotin-requiring enzyme EXH44_03520 PF00682 HMGL-like EXH44_03520 PF02436 Conserved carboxylase domain EXH44_03525 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EXH44_03530 PF03831 PhnA domain EXH44_03530 PF08274 PhnA Zinc-Ribbon EXH44_03540 PF03150 Di-haem cytochrome c peroxidase EXH44_03545 PF07497 Rho termination factor, RNA-binding domain EXH44_03545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EXH44_03545 PF07498 Rho termination factor, N-terminal domain EXH44_03550 PF01479 S4 domain EXH44_03555 PF01430 Hsp33 protein EXH44_03560 PF00929 Exonuclease EXH44_03570 PF03916 Polysulphide reductase, NrfD EXH44_03575 PF13247 4Fe-4S dicluster domain EXH44_03585 PF02335 Cytochrome c552 EXH44_03620 PF03461 TRCF domain EXH44_03620 PF17757 UvrB interaction domain EXH44_03620 PF00270 DEAD/DEAH box helicase EXH44_03620 PF02559 CarD-like/TRCF domain EXH44_03620 PF00271 Helicase conserved C-terminal domain EXH44_03635 PF07687 Peptidase dimerisation domain EXH44_03635 PF01546 Peptidase family M20/M25/M40 EXH44_03640 PF02463 RecF/RecN/SMC N terminal domain EXH44_03645 PF00712 DNA polymerase III beta subunit, N-terminal domain EXH44_03645 PF02767 DNA polymerase III beta subunit, central domain EXH44_03645 PF02768 DNA polymerase III beta subunit, C-terminal domain EXH44_03650 PF00308 Bacterial dnaA protein EXH44_03650 PF08299 Bacterial dnaA protein helix-turn-helix EXH44_03650 PF11638 DnaA N-terminal domain EXH44_03655 PF04461 Protein of unknown function (DUF520) EXH44_03660 PF18429 Domain of unknown function (DUF5609) EXH44_03665 PF10144 Bacterial virulence factor haemolysin EXH44_03670 PF01176 Translation initiation factor 1A / IF-1 EXH44_03675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EXH44_03675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EXH44_03680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EXH44_03685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EXH44_03685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EXH44_03685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EXH44_03685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EXH44_03690 PF00291 Pyridoxal-phosphate dependent enzyme EXH44_03690 PF00585 C-terminal regulatory domain of Threonine dehydratase EXH44_03695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EXH44_03700 PF00230 Major intrinsic protein EXH44_03710 PF01980 tRNA-methyltransferase O EXH44_03710 PF18389 TrmO C-terminal domain EXH44_03715 PF01040 UbiA prenyltransferase family EXH44_03720 PF01521 Iron-sulphur cluster biosynthesis EXH44_03725 PF01061 ABC-2 type transporter EXH44_03730 PF00005 ABC transporter EXH44_03745 PF03275 UDP-galactopyranose mutase EXH44_03765 PF02397 Bacterial sugar transferase EXH44_03770 PF16363 GDP-mannose 4,6 dehydratase EXH44_03775 PF00483 Nucleotidyl transferase EXH44_03780 PF04321 RmlD substrate binding domain EXH44_03785 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EXH44_03790 PF04932 O-Antigen ligase EXH44_03795 PF01165 Ribosomal protein S21 EXH44_03800 PF08278 DNA primase DnaG DnaB-binding EXH44_03800 PF08275 DNA primase catalytic core, N-terminal domain EXH44_03800 PF01807 CHC2 zinc finger EXH44_03800 PF10410 DnaB-helicase binding domain of primase EXH44_03805 PF04539 Sigma-70 region 3 EXH44_03805 PF04546 Sigma-70, non-essential region EXH44_03805 PF03979 Sigma-70 factor, region 1.1 EXH44_03805 PF00140 Sigma-70 factor, region 1.2 EXH44_03805 PF04545 Sigma-70, region 4 EXH44_03805 PF04542 Sigma-70 region 2 EXH44_03810 PF01184 GPR1/FUN34/yaaH family EXH44_03815 PF13416 Bacterial extracellular solute-binding protein EXH44_03820 PF03477 ATP cone domain EXH44_03820 PF02867 Ribonucleotide reductase, barrel domain EXH44_03820 PF00317 Ribonucleotide reductase, all-alpha domain EXH44_03830 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EXH44_03830 PF14850 DNA-binding domain of Proline dehydrogenase EXH44_03830 PF01619 Proline dehydrogenase EXH44_03830 PF00171 Aldehyde dehydrogenase family EXH44_03835 PF00474 Sodium:solute symporter family EXH44_03840 PF00378 Enoyl-CoA hydratase/isomerase EXH44_03850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EXH44_03850 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EXH44_03855 PF00501 AMP-binding enzyme EXH44_03865 PF01238 Phosphomannose isomerase type I EXH44_03870 PF06173 Protein of unknown function (DUF986) EXH44_03875 PF00919 Uncharacterized protein family UPF0004 EXH44_03875 PF01938 TRAM domain EXH44_03875 PF04055 Radical SAM superfamily EXH44_03880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EXH44_03885 PF02896 PEP-utilising enzyme, TIM barrel domain EXH44_03885 PF00391 PEP-utilising enzyme, mobile domain EXH44_03885 PF05524 PEP-utilising enzyme, N-terminal EXH44_03890 PF00381 PTS HPr component phosphorylation site EXH44_03895 PF01118 Semialdehyde dehydrogenase, NAD binding domain EXH44_03895 PF02774 Semialdehyde dehydrogenase, dimerisation domain EXH44_03900 PF13609 Gram-negative porin EXH44_03905 PF02684 Lipid-A-disaccharide synthetase EXH44_03910 PF01297 Zinc-uptake complex component A periplasmic EXH44_03915 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EXH44_03920 PF12805 FUSC-like inner membrane protein yccS EXH44_03930 PF05433 Glycine zipper 2TM domain EXH44_03935 PF06185 YecM protein EXH44_03940 PF03485 Arginyl tRNA synthetase N terminal domain EXH44_03940 PF05746 DALR anticodon binding domain EXH44_03940 PF00750 tRNA synthetases class I (R) EXH44_03945 PF04542 Sigma-70 region 2 EXH44_03945 PF04545 Sigma-70, region 4 EXH44_03945 PF00140 Sigma-70 factor, region 1.2 EXH44_03955 PF08007 Cupin superfamily protein EXH44_03960 PF03806 AbgT putative transporter family EXH44_03965 PF02091 Glycyl-tRNA synthetase alpha subunit EXH44_03970 PF13417 Glutathione S-transferase, N-terminal domain EXH44_04005 PF05746 DALR anticodon binding domain EXH44_04005 PF02092 Glycyl-tRNA synthetase beta subunit EXH44_04015 PF00589 Phage integrase family EXH44_04015 PF02899 Phage integrase, N-terminal SAM-like domain EXH44_04020 PF00037 4Fe-4S binding domain EXH44_04025 PF13521 AAA domain EXH44_04025 PF01467 Cytidylyltransferase-like EXH44_04030 PF00149 Calcineurin-like phosphoesterase EXH44_04035 PF16658 Class II release factor RF3, C-terminal domain EXH44_04035 PF03144 Elongation factor Tu domain 2 EXH44_04035 PF00009 Elongation factor Tu GTP binding domain EXH44_04040 PF00588 SpoU rRNA Methylase family EXH44_04040 PF08032 RNA 2'-O ribose methyltransferase substrate binding EXH44_04055 PF00497 Bacterial extracellular solute-binding proteins, family 3 EXH44_04060 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_04065 PF00005 ABC transporter EXH44_04070 PF00462 Glutaredoxin EXH44_04070 PF08534 Redoxin EXH44_04075 PF03466 LysR substrate binding domain EXH44_04075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_04085 PF12762 ISXO2-like transposase domain EXH44_04095 PF00578 AhpC/TSA family EXH44_04100 PF03109 ABC1 family EXH44_04105 PF02036 SCP-2 sterol transfer family EXH44_04110 PF01209 ubiE/COQ5 methyltransferase family EXH44_04115 PF12724 Flavodoxin domain EXH44_04120 PF01741 Large-conductance mechanosensitive channel, MscL EXH44_04125 PF12762 ISXO2-like transposase domain EXH44_04130 PF00291 Pyridoxal-phosphate dependent enzyme EXH44_04135 PF00445 Ribonuclease T2 family EXH44_04140 PF17283 SprT-like zinc ribbon domain EXH44_04140 PF10263 SprT-like family EXH44_04150 PF00005 ABC transporter EXH44_04155 PF01497 Periplasmic binding protein EXH44_04160 PF01032 FecCD transport family EXH44_04165 PF00593 TonB dependent receptor EXH44_04165 PF07715 TonB-dependent Receptor Plug Domain EXH44_04170 PF12804 MobA-like NTP transferase domain EXH44_04175 PF06288 Protein of unknown function (DUF1040) EXH44_04180 PF01323 DSBA-like thioredoxin domain EXH44_04190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EXH44_04200 PF03023 Lipid II flippase MurJ EXH44_04205 PF01649 Ribosomal protein S20 EXH44_04215 PF13419 Haloacid dehalogenase-like hydrolase EXH44_04220 PF01790 Prolipoprotein diacylglyceryl transferase EXH44_04225 PF01925 Sulfite exporter TauE/SafE EXH44_04230 PF00293 NUDIX domain EXH44_04240 PF00072 Response regulator receiver domain EXH44_04240 PF00486 Transcriptional regulatory protein, C terminal EXH44_04245 PF08521 Two-component sensor kinase N-terminal EXH44_04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_04245 PF00512 His Kinase A (phospho-acceptor) domain EXH44_04250 PF01138 3' exoribonuclease family, domain 1 EXH44_04250 PF03725 3' exoribonuclease family, domain 2 EXH44_04255 PF03755 YicC-like family, N-terminal region EXH44_04255 PF08340 Domain of unknown function (DUF1732) EXH44_04260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EXH44_04260 PF01565 FAD binding domain EXH44_04265 PF03099 Biotin/lipoate A/B protein ligase family EXH44_04265 PF02237 Biotin protein ligase C terminal domain EXH44_04265 PF08279 HTH domain EXH44_04270 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EXH44_04270 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EXH44_04275 PF00719 Inorganic pyrophosphatase EXH44_04280 PF01435 Peptidase family M48 EXH44_04285 PF02080 TrkA-C domain EXH44_04285 PF03600 Citrate transporter EXH44_04290 PF00005 ABC transporter EXH44_04295 PF01061 ABC-2 type transporter EXH44_04305 PF02563 Polysaccharide biosynthesis/export protein EXH44_04315 PF01467 Cytidylyltransferase-like EXH44_04325 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EXH44_04330 PF00535 Glycosyl transferase family 2 EXH44_04330 PF01501 Glycosyl transferase family 8 EXH44_04335 PF13439 Glycosyltransferase Family 4 EXH44_04335 PF00534 Glycosyl transferases group 1 EXH44_04345 PF00226 DnaJ domain EXH44_04345 PF00684 DnaJ central domain EXH44_04345 PF01556 DnaJ C terminal domain EXH44_04355 PF00012 Hsp70 protein EXH44_04360 PF00313 'Cold-shock' DNA-binding domain EXH44_04365 PF00579 tRNA synthetases class I (W and Y) EXH44_04370 PF00871 Acetokinase family EXH44_04375 PF14814 Bifunctional transglycosylase second domain EXH44_04375 PF00905 Penicillin binding protein transpeptidase domain EXH44_04375 PF00912 Transglycosylase EXH44_04380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EXH44_04390 PF12762 ISXO2-like transposase domain EXH44_04395 PF08013 Tagatose 6 phosphate kinase EXH44_04400 PF01926 50S ribosome-binding GTPase EXH44_04400 PF01018 GTP1/OBG EXH44_04405 PF00892 EamA-like transporter family EXH44_04410 PF00892 EamA-like transporter family EXH44_04415 PF01016 Ribosomal L27 protein EXH44_04420 PF00829 Ribosomal prokaryotic L21 protein EXH44_04425 PF01979 Amidohydrolase family EXH44_04430 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EXH44_04440 PF02881 SRP54-type protein, helical bundle domain EXH44_04440 PF00448 SRP54-type protein, GTPase domain EXH44_04445 PF00005 ABC transporter EXH44_04450 PF18075 FtsX extracellular domain EXH44_04455 PF01544 CorA-like Mg2+ transporter protein EXH44_04465 PF05036 Sporulation related domain EXH44_04470 PF00005 ABC transporter EXH44_04480 PF00881 Nitroreductase family EXH44_04485 PF04175 Protein of unknown function (DUF406) EXH44_04490 PF00149 Calcineurin-like phosphoesterase EXH44_04495 PF08676 MutL C terminal dimerisation domain EXH44_04495 PF01119 DNA mismatch repair protein, C-terminal domain EXH44_04500 PF00171 Aldehyde dehydrogenase family EXH44_04505 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EXH44_04510 PF03631 Virulence factor BrkB EXH44_04515 PF02580 D-Tyr-tRNA(Tyr) deacylase EXH44_04520 PF11734 TilS substrate C-terminal domain EXH44_04520 PF09179 TilS substrate binding domain EXH44_04520 PF01171 PP-loop family EXH44_04530 PF00589 Phage integrase family EXH44_04530 PF02899 Phage integrase, N-terminal SAM-like domain EXH44_04575 PF01177 Asp/Glu/Hydantoin racemase EXH44_04580 PF04345 Chorismate lyase EXH44_04590 PF00270 DEAD/DEAH box helicase EXH44_04590 PF00271 Helicase conserved C-terminal domain EXH44_04590 PF17191 RecG wedge domain EXH44_04595 PF04607 Region found in RelA / SpoT proteins EXH44_04595 PF13291 ACT domain EXH44_04595 PF02824 TGS domain EXH44_04600 PF01192 RNA polymerase Rpb6 EXH44_04620 PF01523 Putative modulator of DNA gyrase EXH44_04635 PF02785 Biotin carboxylase C-terminal domain EXH44_04635 PF00289 Biotin carboxylase, N-terminal domain EXH44_04635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EXH44_04650 PF12464 Maltose acetyltransferase EXH44_04650 PF14602 Hexapeptide repeat of succinyl-transferase EXH44_04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_04670 PF03466 LysR substrate binding domain EXH44_04680 PF01037 Lrp/AsnC ligand binding domain EXH44_04685 PF01810 LysE type translocator EXH44_04690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EXH44_04690 PF07992 Pyridine nucleotide-disulphide oxidoreductase EXH44_04695 PF01022 Bacterial regulatory protein, arsR family EXH44_04705 PF13460 NAD(P)H-binding EXH44_04710 PF01638 HxlR-like helix-turn-helix EXH44_04720 PF04076 Bacterial OB fold (BOF) protein EXH44_04730 PF03590 Aspartate-ammonia ligase EXH44_04735 PF13404 AsnC-type helix-turn-helix domain EXH44_04735 PF01037 Lrp/AsnC ligand binding domain EXH44_04740 PF01048 Phosphorylase superfamily EXH44_04745 PF01926 50S ribosome-binding GTPase EXH44_04745 PF16360 GTP-binding GTPase Middle Region EXH44_04745 PF13167 GTP-binding GTPase N-terminal EXH44_04750 PF17209 Hfq protein EXH44_04760 PF01494 FAD binding domain EXH44_04765 PF01078 Magnesium chelatase, subunit ChlI EXH44_04765 PF13335 Magnesium chelatase, subunit ChlI C-terminal EXH44_04770 PF09115 DNA polymerase III, delta subunit, C terminal EXH44_04785 PF02223 Thymidylate kinase EXH44_04790 PF02618 YceG-like family EXH44_04810 PF00121 Triosephosphate isomerase EXH44_04815 PF01142 tRNA pseudouridine synthase D (TruD) EXH44_04820 PF01975 Survival protein SurE EXH44_04825 PF09335 SNARE associated Golgi protein EXH44_04835 PF01551 Peptidase family M23 EXH44_04835 PF01476 LysM domain EXH44_04845 PF03352 Methyladenine glycosylase EXH44_04850 PF01648 4'-phosphopantetheinyl transferase superfamily EXH44_04855 PF06146 Phosphate-starvation-inducible E EXH44_04860 PF00293 NUDIX domain EXH44_04865 PF01545 Cation efflux family EXH44_04870 PF13411 MerR HTH family regulatory protein EXH44_04885 PF08501 Shikimate dehydrogenase substrate binding domain EXH44_04890 PF01245 Ribosomal protein L19 EXH44_04895 PF01746 tRNA (Guanine-1)-methyltransferase EXH44_04900 PF05239 PRC-barrel domain EXH44_04900 PF01782 RimM N-terminal domain EXH44_04905 PF00886 Ribosomal protein S16 EXH44_04910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EXH44_04910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EXH44_04910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EXH44_04910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EXH44_04915 PF02525 Flavodoxin-like fold EXH44_04920 PF01196 Ribosomal protein L17 EXH44_04925 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EXH44_04925 PF01000 RNA polymerase Rpb3/RpoA insert domain EXH44_04925 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EXH44_04930 PF01479 S4 domain EXH44_04930 PF00163 Ribosomal protein S4/S9 N-terminal domain EXH44_04935 PF00411 Ribosomal protein S11 EXH44_04940 PF00416 Ribosomal protein S13/S18 EXH44_04945 PF00444 Ribosomal protein L36 EXH44_04950 PF00344 SecY translocase EXH44_04955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EXH44_04960 PF00327 Ribosomal protein L30p/L7e EXH44_04965 PF00333 Ribosomal protein S5, N-terminal domain EXH44_04965 PF03719 Ribosomal protein S5, C-terminal domain EXH44_04970 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EXH44_04975 PF00347 Ribosomal protein L6 EXH44_04980 PF00410 Ribosomal protein S8 EXH44_04985 PF00253 Ribosomal protein S14p/S29e EXH44_04990 PF00281 Ribosomal protein L5 EXH44_04990 PF00673 ribosomal L5P family C-terminus EXH44_04995 PF00467 KOW motif EXH44_04995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EXH44_05000 PF00238 Ribosomal protein L14p/L23e EXH44_05010 PF00027 Cyclic nucleotide-binding domain EXH44_05010 PF00520 Ion transport protein EXH44_05025 PF00366 Ribosomal protein S17 EXH44_05030 PF00831 Ribosomal L29 protein EXH44_05035 PF00252 Ribosomal protein L16p/L10e EXH44_05040 PF07650 KH domain EXH44_05040 PF00189 Ribosomal protein S3, C-terminal domain EXH44_05045 PF00237 Ribosomal protein L22p/L17e EXH44_05050 PF00203 Ribosomal protein S19 EXH44_05055 PF03947 Ribosomal Proteins L2, C-terminal domain EXH44_05055 PF00181 Ribosomal Proteins L2, RNA binding domain EXH44_05060 PF00276 Ribosomal protein L23 EXH44_05065 PF00573 Ribosomal protein L4/L1 family EXH44_05070 PF00297 Ribosomal protein L3 EXH44_05075 PF00338 Ribosomal protein S10p/S20e EXH44_05080 PF04994 TfoX C-terminal domain EXH44_05080 PF04993 TfoX N-terminal domain EXH44_05085 PF00206 Lyase EXH44_05085 PF10415 Fumarase C C-terminus EXH44_05090 PF17782 DprA winged helix domain EXH44_05090 PF02481 DNA recombination-mediator protein A EXH44_05095 PF01327 Polypeptide deformylase EXH44_05100 PF01370 NAD dependent epimerase/dehydratase family EXH44_05105 PF00005 ABC transporter EXH44_05110 PF02653 Branched-chain amino acid transport system / permease component EXH44_05125 PF02447 GntP family permease EXH44_05130 PF01370 NAD dependent epimerase/dehydratase family EXH44_05135 PF01261 Xylose isomerase-like TIM barrel EXH44_05140 PF00596 Class II Aldolase and Adducin N-terminal domain EXH44_05145 PF07005 Sugar-binding N-terminal domain EXH44_05145 PF17042 Nucleotide-binding C-terminal domain EXH44_05150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EXH44_05150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EXH44_05155 PF08220 DeoR-like helix-turn-helix domain EXH44_05155 PF00455 DeoR C terminal sensor domain EXH44_05165 PF03605 Anaerobic c4-dicarboxylate membrane transporter EXH44_05170 PF01678 Diaminopimelate epimerase EXH44_05185 PF01464 Transglycosylase SLT domain EXH44_05185 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EXH44_05190 PF04362 Bacterial Fe(2+) trafficking EXH44_05195 PF00730 HhH-GPD superfamily base excision DNA repair protein EXH44_05195 PF14815 NUDIX domain EXH44_05200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EXH44_05205 PF17746 SfsA N-terminal OB domain EXH44_05205 PF03749 Sugar fermentation stimulation protein RE domain EXH44_05210 PF00367 phosphotransferase system, EIIB EXH44_05210 PF02378 Phosphotransferase system, EIIC EXH44_05210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EXH44_05215 PF00227 Proteasome subunit EXH44_05220 PF10431 C-terminal, D2-small domain, of ClpB protein EXH44_05220 PF07724 AAA domain (Cdc48 subfamily) EXH44_05220 PF00004 ATPase family associated with various cellular activities (AAA) EXH44_05225 PF00488 MutS domain V EXH44_05225 PF05190 MutS family domain IV EXH44_05225 PF05192 MutS domain III EXH44_05225 PF05188 MutS domain II EXH44_05225 PF01624 MutS domain I EXH44_05230 PF05658 Head domain of trimeric autotransporter adhesin EXH44_05230 PF05662 Coiled stalk of trimeric autotransporter adhesin EXH44_05230 PF03895 YadA-like membrane anchor domain EXH44_05230 PF13018 Extended Signal Peptide of Type V secretion system EXH44_05230 PF05662 Coiled stalk of trimeric autotransporter adhesin EXH44_05230 PF05658 Head domain of trimeric autotransporter adhesin EXH44_05230 PF05662 Coiled stalk of trimeric autotransporter adhesin EXH44_05230 PF03895 YadA-like membrane anchor domain EXH44_05230 PF05658 Head domain of trimeric autotransporter adhesin EXH44_05230 PF13018 Extended Signal Peptide of Type V secretion system EXH44_05230 PF13018 Extended Signal Peptide of Type V secretion system EXH44_05230 PF03895 YadA-like membrane anchor domain EXH44_05240 PF00043 Glutathione S-transferase, C-terminal domain EXH44_05240 PF02798 Glutathione S-transferase, N-terminal domain EXH44_05245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EXH44_05245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EXH44_05255 PF18254 HMW1 domain 2 EXH44_05255 PF18071 HMW1C N-terminal EXH44_05260 PF00919 Uncharacterized protein family UPF0004 EXH44_05260 PF18693 TRAM domain EXH44_05260 PF04055 Radical SAM superfamily EXH44_05265 PF01048 Phosphorylase superfamily EXH44_05275 PF04102 SlyX EXH44_05280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EXH44_05280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EXH44_05285 PF08348 YheO-like PAS domain EXH44_05285 PF13309 HTH domain EXH44_05290 PF02635 DsrE/DsrF-like family EXH44_05295 PF02635 DsrE/DsrF-like family EXH44_05300 PF04077 DsrH like protein EXH44_05315 PF13936 Helix-turn-helix domain EXH44_05315 PF00665 Integrase core domain EXH44_05340 PF00294 pfkB family carbohydrate kinase EXH44_05345 PF13407 Periplasmic binding protein domain EXH44_05350 PF02653 Branched-chain amino acid transport system / permease component EXH44_05355 PF00005 ABC transporter EXH44_05360 PF05025 RbsD / FucU transport protein family EXH44_05365 PF00356 Bacterial regulatory proteins, lacI family EXH44_05375 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EXH44_05380 PF02874 ATP synthase alpha/beta family, beta-barrel domain EXH44_05380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EXH44_05385 PF00231 ATP synthase EXH44_05390 PF00306 ATP synthase alpha/beta chain, C terminal domain EXH44_05390 PF02874 ATP synthase alpha/beta family, beta-barrel domain EXH44_05390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EXH44_05395 PF00213 ATP synthase delta (OSCP) subunit EXH44_05400 PF00430 ATP synthase B/B' CF(0) EXH44_05405 PF00137 ATP synthase subunit C EXH44_05410 PF00119 ATP synthase A chain EXH44_05420 PF02527 rRNA small subunit methyltransferase G EXH44_05430 PF01134 Glucose inhibited division protein A EXH44_05430 PF13932 GidA associated domain EXH44_05435 PF00367 phosphotransferase system, EIIB EXH44_05435 PF02378 Phosphotransferase system, EIIC EXH44_05435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EXH44_05440 PF00455 DeoR C terminal sensor domain EXH44_05440 PF08220 DeoR-like helix-turn-helix domain EXH44_05445 PF02952 L-fucose isomerase, C-terminal domain EXH44_05445 PF07882 L-fucose isomerase, second N-terminal domain EXH44_05445 PF07881 L-fucose isomerase, first N-terminal domain EXH44_05450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EXH44_05450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EXH44_05455 PF05025 RbsD / FucU transport protein family EXH44_05460 PF00596 Class II Aldolase and Adducin N-terminal domain EXH44_05465 PF00005 ABC transporter EXH44_05470 PF02653 Branched-chain amino acid transport system / permease component EXH44_05475 PF13407 Periplasmic binding protein domain EXH44_05480 PF07690 Major Facilitator Superfamily EXH44_05485 PF00465 Iron-containing alcohol dehydrogenase EXH44_05490 PF00171 Aldehyde dehydrogenase family EXH44_05495 PF00171 Aldehyde dehydrogenase family EXH44_05500 PF01066 CDP-alcohol phosphatidyltransferase EXH44_05505 PF12146 Serine aminopeptidase, S33 EXH44_05505 PF12147 Putative methyltransferase EXH44_05510 PF00782 Dual specificity phosphatase, catalytic domain EXH44_05530 PF13276 HTH-like domain EXH44_05530 PF00665 Integrase core domain EXH44_05530 PF13333 Integrase core domain EXH44_05540 PF02754 Cysteine-rich domain EXH44_05540 PF13183 4Fe-4S dicluster domain EXH44_05545 PF00890 FAD binding domain EXH44_05550 PF01266 FAD dependent oxidoreductase EXH44_05550 PF04324 BFD-like [2Fe-2S] binding domain EXH44_05555 PF07690 Major Facilitator Superfamily EXH44_05560 PF03009 Glycerophosphoryl diester phosphodiesterase family EXH44_05565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EXH44_05565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EXH44_05570 PF12838 4Fe-4S dicluster domain EXH44_05570 PF00037 4Fe-4S binding domain EXH44_05575 PF02613 Nitrate reductase delta subunit EXH44_05580 PF04976 DMSO reductase anchor subunit (DmsC) EXH44_05585 PF13247 4Fe-4S dicluster domain EXH44_05585 PF12800 4Fe-4S binding domain EXH44_05590 PF01568 Molydopterin dinucleotide binding domain EXH44_05590 PF00384 Molybdopterin oxidoreductase EXH44_05590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EXH44_05595 PF03222 Tryptophan/tyrosine permease family EXH44_05600 PF01212 Beta-eliminating lyase EXH44_05625 PF02872 5'-nucleotidase, C-terminal domain EXH44_05625 PF00149 Calcineurin-like phosphoesterase EXH44_05630 PF00258 Flavodoxin EXH44_05665 PF01717 Cobalamin-independent synthase, Catalytic domain EXH44_05665 PF08267 Cobalamin-independent synthase, N-terminal domain EXH44_05675 PF02978 Signal peptide binding domain EXH44_05675 PF02881 SRP54-type protein, helical bundle domain EXH44_05675 PF00448 SRP54-type protein, GTPase domain EXH44_05680 PF05159 Capsule polysaccharide biosynthesis protein EXH44_05685 PF05159 Capsule polysaccharide biosynthesis protein EXH44_05690 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EXH44_05695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EXH44_05705 PF08525 Opacity-associated protein A N-terminal motif EXH44_05705 PF04225 Opacity-associated protein A LysM-like domain EXH44_05715 PF02666 Phosphatidylserine decarboxylase EXH44_05720 PF08534 Redoxin EXH44_05725 PF03918 Cytochrome C biogenesis protein EXH44_05730 PF03918 Cytochrome C biogenesis protein EXH44_05735 PF08534 Redoxin EXH44_05740 PF01553 Acyltransferase EXH44_05745 PF07732 Multicopper oxidase EXH44_05745 PF07731 Multicopper oxidase EXH44_05750 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EXH44_05760 PF08543 Phosphomethylpyrimidine kinase EXH44_05765 PF01925 Sulfite exporter TauE/SafE EXH44_05770 PF00474 Sodium:solute symporter family EXH44_05775 PF16347 Domain of unknown function (DUF4976) EXH44_05780 PF00027 Cyclic nucleotide-binding domain EXH44_05785 PF04055 Radical SAM superfamily EXH44_05785 PF13186 Iron-sulfur cluster-binding domain EXH44_05790 PF07690 Major Facilitator Superfamily EXH44_05795 PF03937 Flavinator of succinate dehydrogenase EXH44_05800 PF02401 LytB protein EXH44_05805 PF01252 Signal peptidase (SPase) II EXH44_05810 PF00543 Nitrogen regulatory protein P-II EXH44_05815 PF00994 Probable molybdopterin binding domain EXH44_05820 PF04304 Protein of unknown function (DUF454) EXH44_05825 PF00535 Glycosyl transferase family 2 EXH44_05830 PF00149 Calcineurin-like phosphoesterase EXH44_05835 PF07509 Protein of unknown function (DUF1523) EXH44_05840 PF01026 TatD related DNase EXH44_05845 PF00152 tRNA synthetases class II (D, K and N) EXH44_05850 PF02386 Cation transport protein EXH44_05855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EXH44_05855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EXH44_05860 PF00209 Sodium:neurotransmitter symporter family EXH44_05870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EXH44_05875 PF00467 KOW motif EXH44_05875 PF02357 Transcription termination factor nusG EXH44_05880 PF03946 Ribosomal protein L11, N-terminal domain EXH44_05880 PF00298 Ribosomal protein L11, RNA binding domain EXH44_05885 PF00687 Ribosomal protein L1p/L10e family EXH44_05890 PF00466 Ribosomal protein L10 EXH44_05895 PF00542 Ribosomal protein L7/L12 C-terminal domain EXH44_05895 PF16320 Ribosomal protein L7/L12 dimerisation domain EXH44_05900 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EXH44_05905 PF01850 PIN domain EXH44_05910 PF01381 Helix-turn-helix EXH44_05920 PF04563 RNA polymerase beta subunit EXH44_05920 PF04561 RNA polymerase Rpb2, domain 2 EXH44_05920 PF04565 RNA polymerase Rpb2, domain 3 EXH44_05920 PF10385 RNA polymerase beta subunit external 1 domain EXH44_05920 PF00562 RNA polymerase Rpb2, domain 6 EXH44_05920 PF04560 RNA polymerase Rpb2, domain 7 EXH44_05925 PF05000 RNA polymerase Rpb1, domain 4 EXH44_05925 PF04983 RNA polymerase Rpb1, domain 3 EXH44_05925 PF00623 RNA polymerase Rpb1, domain 2 EXH44_05925 PF04997 RNA polymerase Rpb1, domain 1 EXH44_05925 PF04998 RNA polymerase Rpb1, domain 5 EXH44_05930 PF03061 Thioesterase superfamily EXH44_05935 PF01565 FAD binding domain EXH44_05935 PF13183 4Fe-4S dicluster domain EXH44_05935 PF02913 FAD linked oxidases, C-terminal domain EXH44_05940 PF00691 OmpA family EXH44_05940 PF01389 OmpA-like transmembrane domain EXH44_05945 PF12762 ISXO2-like transposase domain EXH44_05950 PF01389 OmpA-like transmembrane domain EXH44_05950 PF00691 OmpA family EXH44_05955 PF17414 MatP C-terminal ribbon-helix-helix domain EXH44_05955 PF06303 MatP N-terminal domain EXH44_05960 PF05362 Lon protease (S16) C-terminal proteolytic domain EXH44_05960 PF13654 AAA domain EXH44_05965 PF07977 FabA-like domain EXH44_05990 PF17946 RecC C-terminal domain EXH44_05995 PF05193 Peptidase M16 inactive domain EXH44_05995 PF16187 Middle or third domain of peptidase_M16 EXH44_05995 PF00675 Insulinase (Peptidase family M16) EXH44_06005 PF02525 Flavodoxin-like fold EXH44_06020 PF06965 Na+/H+ antiporter 1 EXH44_06025 PF00892 EamA-like transporter family EXH44_06030 PF00468 Ribosomal protein L34 EXH44_06035 PF00825 Ribonuclease P EXH44_06040 PF01809 Putative membrane protein insertion efficiency factor EXH44_06045 PF01205 Uncharacterized protein family UPF0029 EXH44_06045 PF09186 Domain of unknown function (DUF1949) EXH44_06050 PF16868 NMT1-like family EXH44_06065 PF00551 Formyl transferase EXH44_06065 PF02911 Formyl transferase, C-terminal domain EXH44_06070 PF01029 NusB family EXH44_06070 PF01189 16S rRNA methyltransferase RsmB/F EXH44_06075 PF02080 TrkA-C domain EXH44_06075 PF02254 TrkA-N domain EXH44_06080 PF00834 Ribulose-phosphate 3 epimerase family EXH44_06085 PF01197 Ribosomal protein L31 EXH44_06090 PF00444 Ribosomal protein L36 EXH44_06095 PF12838 4Fe-4S dicluster domain EXH44_06095 PF13187 4Fe-4S dicluster domain EXH44_06100 PF03927 NapD protein EXH44_06105 PF01568 Molydopterin dinucleotide binding domain EXH44_06105 PF00384 Molybdopterin oxidoreductase EXH44_06105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EXH44_06105 PF10518 TAT (twin-arginine translocation) pathway signal sequence EXH44_06110 PF12838 4Fe-4S dicluster domain EXH44_06110 PF12800 4Fe-4S binding domain EXH44_06115 PF12837 4Fe-4S binding domain EXH44_06115 PF12801 4Fe-4S binding domain EXH44_06120 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EXH44_06125 PF03264 NapC/NirT cytochrome c family, N-terminal region EXH44_06130 PF00356 Bacterial regulatory proteins, lacI family EXH44_06130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EXH44_06135 PF01202 Shikimate kinase EXH44_06140 PF02447 GntP family permease EXH44_06145 PF03819 MazG nucleotide pyrophosphohydrolase domain EXH44_06150 PF03641 Possible lysine decarboxylase EXH44_06155 PF12631 MnmE helical domain EXH44_06155 PF10396 GTP-binding protein TrmE N-terminus EXH44_06155 PF01926 50S ribosome-binding GTPase EXH44_06160 PF02525 Flavodoxin-like fold EXH44_06165 PF14821 Threonine synthase N terminus EXH44_06165 PF00291 Pyridoxal-phosphate dependent enzyme EXH44_06175 PF07690 Major Facilitator Superfamily EXH44_06180 PF02142 MGS-like domain EXH44_06205 PF01571 Aminomethyltransferase folate-binding domain EXH44_06210 PF01351 Ribonuclease HII EXH44_06220 PF03737 Aldolase/RraA EXH44_06225 PF05175 Methyltransferase small domain EXH44_06230 PF00485 Phosphoribulokinase / Uridine kinase family EXH44_06255 PF00009 Elongation factor Tu GTP binding domain EXH44_06255 PF03144 Elongation factor Tu domain 2 EXH44_06255 PF03143 Elongation factor Tu C-terminal domain EXH44_06260 PF03144 Elongation factor Tu domain 2 EXH44_06260 PF09106 Elongation factor SelB, winged helix EXH44_06260 PF00009 Elongation factor Tu GTP binding domain EXH44_06260 PF09107 Elongation factor SelB, winged helix EXH44_06265 PF03841 L-seryl-tRNA selenium transferase EXH44_06265 PF12390 Selenocysteine synthase N terminal EXH44_06275 PF13356 Arm DNA-binding domain EXH44_06275 PF14659 Phage integrase, N-terminal SAM-like domain EXH44_06275 PF00589 Phage integrase family EXH44_06365 PF02590 Predicted SPOUT methyltransferase EXH44_06370 PF00905 Penicillin binding protein transpeptidase domain EXH44_06370 PF03717 Penicillin-binding Protein dimerisation domain EXH44_06375 PF01098 Cell cycle protein EXH44_06380 PF05036 Sporulation related domain EXH44_06380 PF03330 Lytic transglycolase EXH44_06385 PF00768 D-alanyl-D-alanine carboxypeptidase EXH44_06385 PF07943 Penicillin-binding protein 5, C-terminal domain EXH44_06390 PF04359 Protein of unknown function (DUF493) EXH44_06400 PF02661 Fic/DOC family EXH44_06400 PF17841 BID domain of Bartonella effector protein (Bep) EXH44_06405 PF03099 Biotin/lipoate A/B protein ligase family EXH44_06410 PF04055 Radical SAM superfamily EXH44_06410 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EXH44_06415 PF04055 Radical SAM superfamily EXH44_06420 PF11230 Protein of unknown function (DUF3029) EXH44_06425 PF03960 ArsC family EXH44_06430 PF01220 Dehydroquinase class II EXH44_06435 PF00364 Biotin-requiring enzyme EXH44_06440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EXH44_06440 PF02785 Biotin carboxylase C-terminal domain EXH44_06440 PF00289 Biotin carboxylase, N-terminal domain EXH44_06450 PF00581 Rhodanese-like domain EXH44_06455 PF00581 Rhodanese-like domain EXH44_06460 PF04143 Sulphur transport EXH44_06465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EXH44_06470 PF03144 Elongation factor Tu domain 2 EXH44_06470 PF00009 Elongation factor Tu GTP binding domain EXH44_06470 PF03143 Elongation factor Tu C-terminal domain EXH44_06475 PF00009 Elongation factor Tu GTP binding domain EXH44_06475 PF03764 Elongation factor G, domain IV EXH44_06475 PF03144 Elongation factor Tu domain 2 EXH44_06475 PF00679 Elongation factor G C-terminus EXH44_06475 PF14492 Elongation Factor G, domain II EXH44_06480 PF00177 Ribosomal protein S7p/S5e EXH44_06485 PF00164 Ribosomal protein S12/S23 EXH44_06490 PF00762 Ferrochelatase EXH44_06495 PF00543 Nitrogen regulatory protein P-II EXH44_06500 PF00909 Ammonium Transporter Family EXH44_06505 PF01431 Peptidase family M13 EXH44_06505 PF05649 Peptidase family M13 EXH44_06520 PF05958 tRNA (Uracil-5-)-methyltransferase EXH44_06525 PF04219 Protein of unknown function, DUF EXH44_06530 PF00171 Aldehyde dehydrogenase family EXH44_06530 PF00465 Iron-containing alcohol dehydrogenase EXH44_06535 PF00471 Ribosomal protein L33 EXH44_06540 PF00830 Ribosomal L28 family EXH44_06545 PF04002 RadC-like JAB domain EXH44_06550 PF04127 DNA / pantothenate metabolism flavoprotein EXH44_06550 PF02441 Flavoprotein EXH44_06555 PF01501 Glycosyl transferase family 8 EXH44_06570 PF00692 dUTPase EXH44_06575 PF00440 Bacterial regulatory proteins, tetR family EXH44_06580 PF06794 Uncharacterised protein family (UPF0270) EXH44_06585 PF00027 Cyclic nucleotide-binding domain EXH44_06585 PF13545 Crp-like helix-turn-helix domain EXH44_06590 PF16177 Acetyl-coenzyme A synthetase N-terminus EXH44_06590 PF13193 AMP-binding enzyme C-terminal domain EXH44_06590 PF00501 AMP-binding enzyme EXH44_06595 PF00571 CBS domain EXH44_06595 PF01595 Cyclin M transmembrane N-terminal domain EXH44_06595 PF03471 Transporter associated domain EXH44_06605 PF14602 Hexapeptide repeat of succinyl-transferase EXH44_06605 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EXH44_06605 PF00132 Bacterial transferase hexapeptide (six repeats) EXH44_06615 PF02801 Beta-ketoacyl synthase, C-terminal domain EXH44_06615 PF00109 Beta-ketoacyl synthase, N-terminal domain EXH44_06630 PF02801 Beta-ketoacyl synthase, C-terminal domain EXH44_06630 PF00109 Beta-ketoacyl synthase, N-terminal domain EXH44_06640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EXH44_06640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EXH44_06660 PF00005 ABC transporter EXH44_06695 PF00550 Phosphopantetheine attachment site EXH44_06715 PF11008 Protein of unknown function (DUF2846) EXH44_06755 PF03061 Thioesterase superfamily EXH44_06760 PF03548 Outer membrane lipoprotein carrier protein LolA EXH44_06770 PF04820 Tryptophan halogenase EXH44_06775 PF02620 Large ribosomal RNA subunit accumulation protein YceD EXH44_06780 PF01783 Ribosomal L32p protein family EXH44_06785 PF02504 Fatty acid synthesis protein EXH44_06790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EXH44_06790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EXH44_06795 PF02390 Putative methyltransferase EXH44_06800 PF04320 Protein with unknown function (DUF469) EXH44_06805 PF02325 YGGT family EXH44_06810 PF02594 Uncharacterised ACR, YggU family COG1872 EXH44_06815 PF01578 Cytochrome C assembly protein EXH44_06820 PF01595 Cyclin M transmembrane N-terminal domain EXH44_06820 PF03471 Transporter associated domain EXH44_06820 PF00571 CBS domain EXH44_06825 PF00348 Polyprenyl synthetase EXH44_06830 PF02677 Epoxyqueuosine reductase QueH EXH44_06840 PF00698 Acyl transferase domain EXH44_06850 PF05525 Branched-chain amino acid transport protein EXH44_06855 PF06827 Zinc finger found in FPG and IleRS EXH44_06855 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EXH44_06855 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EXH44_06860 PF12849 PBP superfamily domain EXH44_06865 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_06870 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_06875 PF00005 ABC transporter EXH44_06910 PF13276 HTH-like domain EXH44_06910 PF13333 Integrase core domain EXH44_06910 PF00665 Integrase core domain EXH44_06915 PF00106 short chain dehydrogenase EXH44_06920 PF13018 Extended Signal Peptide of Type V secretion system EXH44_06920 PF03895 YadA-like membrane anchor domain EXH44_06920 PF05658 Head domain of trimeric autotransporter adhesin EXH44_06920 PF05662 Coiled stalk of trimeric autotransporter adhesin EXH44_06930 PF00072 Response regulator receiver domain EXH44_06930 PF00486 Transcriptional regulatory protein, C terminal EXH44_06935 PF00512 His Kinase A (phospho-acceptor) domain EXH44_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_06940 PF03830 PTS system sorbose subfamily IIB component EXH44_06940 PF03610 PTS system fructose IIA component EXH44_06945 PF03609 PTS system sorbose-specific iic component EXH44_06950 PF03613 PTS system mannose/fructose/sorbose family IID component EXH44_06960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EXH44_06960 PF02769 AIR synthase related protein, C-terminal domain EXH44_06960 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EXH44_06965 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) EXH44_06970 PF13416 Bacterial extracellular solute-binding protein EXH44_06985 PF17311 Family of unknown function (DUF5358) EXH44_06990 PF00890 FAD binding domain EXH44_06990 PF02910 Fumarate reductase flavoprotein C-term EXH44_06995 PF13183 4Fe-4S dicluster domain EXH44_06995 PF13085 2Fe-2S iron-sulfur cluster binding domain EXH44_07000 PF02300 Fumarate reductase subunit C EXH44_07005 PF02313 Fumarate reductase subunit D EXH44_07010 PF08264 Anticodon-binding domain of tRNA EXH44_07010 PF00133 tRNA synthetases class I (I, L, M and V) EXH44_07010 PF10458 Valyl tRNA synthetase tRNA binding arm EXH44_07015 PF13673 Acetyltransferase (GNAT) domain EXH44_07025 PF04364 DNA polymerase III chi subunit, HolC EXH44_07030 PF01476 LysM domain EXH44_07035 PF05697 Bacterial trigger factor protein (TF) EXH44_07035 PF05698 Bacterial trigger factor protein (TF) C-terminus EXH44_07035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EXH44_07040 PF00581 Rhodanese-like domain EXH44_07045 PF02556 Preprotein translocase subunit SecB EXH44_07050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EXH44_07050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EXH44_07055 PF00132 Bacterial transferase hexapeptide (six repeats) EXH44_07055 PF06426 Serine acetyltransferase, N-terminal EXH44_07060 PF10571 Uncharacterised protein family UPF0547 EXH44_07065 PF12697 Alpha/beta hydrolase family EXH44_07070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EXH44_07070 PF16582 Middle domain of thiamine pyrophosphate EXH44_07070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EXH44_07080 PF00202 Aminotransferase class-III EXH44_07085 PF00953 Glycosyl transferase family 4 EXH44_07100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EXH44_07105 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 EXH44_07115 PF03808 Glycosyl transferase WecB/TagA/CpsF family EXH44_07165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_07170 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EXH44_07175 PF08245 Mur ligase middle domain EXH44_07175 PF02875 Mur ligase family, glutamate ligase domain EXH44_07175 PF01225 Mur ligase family, catalytic domain EXH44_07185 PF04445 Putative SAM-dependent methyltransferase EXH44_07190 PF02557 D-alanyl-D-alanine carboxypeptidase EXH44_07195 PF07687 Peptidase dimerisation domain EXH44_07195 PF01546 Peptidase family M20/M25/M40 EXH44_07205 PF03960 ArsC family EXH44_07210 PF02417 Chromate transporter EXH44_07215 PF00809 Pterin binding enzyme EXH44_07225 PF01479 S4 domain EXH44_07225 PF00849 RNA pseudouridylate synthase EXH44_07230 PF00924 Mechanosensitive ion channel EXH44_07230 PF05552 Conserved TM helix EXH44_07235 PF00575 S1 RNA binding domain EXH44_07235 PF12111 Polyribonucleotide phosphorylase C terminal EXH44_07235 PF10150 Ribonuclease E/G family EXH44_07250 PF00294 pfkB family carbohydrate kinase EXH44_07255 PF00251 Glycosyl hydrolases family 32 N-terminal domain EXH44_07255 PF08244 Glycosyl hydrolases family 32 C terminal EXH44_07260 PF13407 Periplasmic binding protein domain EXH44_07260 PF00356 Bacterial regulatory proteins, lacI family EXH44_07265 PF00209 Sodium:neurotransmitter symporter family EXH44_07275 PF02810 SEC-C motif EXH44_07280 PF14849 YidC periplasmic domain EXH44_07280 PF02096 60Kd inner membrane protein EXH44_07285 PF02416 mttA/Hcf106 family EXH44_07295 PF00902 Sec-independent protein translocase protein (TatC) EXH44_07300 PF00490 Delta-aminolevulinic acid dehydratase EXH44_07305 PF01380 SIS domain EXH44_07310 PF00455 DeoR C terminal sensor domain EXH44_07310 PF08220 DeoR-like helix-turn-helix domain EXH44_07315 PF17876 Cold shock domain EXH44_07315 PF08461 Ribonuclease R winged-helix domain EXH44_07315 PF08206 Ribonuclease B OB domain EXH44_07315 PF00575 S1 RNA binding domain EXH44_07315 PF00773 RNB domain EXH44_07320 PF10531 SLBB domain EXH44_07325 PF00474 Sodium:solute symporter family EXH44_07330 PF06196 Protein of unknown function (DUF997) EXH44_07335 PF01340 Met Apo-repressor, MetJ EXH44_07340 PF00550 Phosphopantetheine attachment site EXH44_07345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EXH44_07345 PF03129 Anticodon binding domain EXH44_07345 PF04073 Aminoacyl-tRNA editing domain EXH44_07350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EXH44_07350 PF02142 MGS-like domain EXH44_07350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EXH44_07355 PF00117 Glutamine amidotransferase class-I EXH44_07355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EXH44_07360 PF03313 Serine dehydratase alpha chain EXH44_07365 PF01699 Sodium/calcium exchanger protein EXH44_07375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EXH44_07375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EXH44_07390 PF01177 Asp/Glu/Hydantoin racemase EXH44_07400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EXH44_07405 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EXH44_07405 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EXH44_07410 PF00459 Inositol monophosphatase family EXH44_07420 PF00293 NUDIX domain EXH44_07430 PF01226 Formate/nitrite transporter EXH44_07435 PF01228 Glycine radical EXH44_07435 PF02901 Pyruvate formate lyase-like EXH44_07440 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EXH44_07440 PF05221 S-adenosyl-L-homocysteine hydrolase EXH44_07445 PF04055 Radical SAM superfamily EXH44_07450 PF00717 Peptidase S24-like EXH44_07455 PF00877 NlpC/P60 family EXH44_07460 PF01261 Xylose isomerase-like TIM barrel EXH44_07470 PF00310 Glutamine amidotransferases class-II EXH44_07470 PF04898 Glutamate synthase central domain EXH44_07470 PF01645 Conserved region in glutamate synthase EXH44_07470 PF01493 GXGXG motif EXH44_07475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EXH44_07475 PF07992 Pyridine nucleotide-disulphide oxidoreductase EXH44_07480 PF00579 tRNA synthetases class I (W and Y) EXH44_07480 PF01479 S4 domain EXH44_07485 PF17954 Quercetinase C-terminal cupin domain EXH44_07485 PF02678 Pirin EXH44_07490 PF02592 Putative vitamin uptake transporter EXH44_07495 PF00557 Metallopeptidase family M24 EXH44_07505 PF00486 Transcriptional regulatory protein, C terminal EXH44_07505 PF00072 Response regulator receiver domain EXH44_07510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EXH44_07510 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region EXH44_07515 PF00892 EamA-like transporter family EXH44_07520 PF02152 Dihydroneopterin aldolase EXH44_07525 PF02660 Glycerol-3-phosphate acyltransferase EXH44_07530 PF01048 Phosphorylase superfamily EXH44_07535 PF01791 DeoC/LacD family aldolase EXH44_07540 PF01773 Na+ dependent nucleoside transporter N-terminus EXH44_07540 PF07662 Na+ dependent nucleoside transporter C-terminus EXH44_07540 PF07670 Nucleoside recognition EXH44_07545 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EXH44_07550 PF00480 ROK family EXH44_07555 PF17874 MalT-like TPR region EXH44_07555 PF00196 Bacterial regulatory proteins, luxR family EXH44_07560 PF00923 Transaldolase/Fructose-6-phosphate aldolase EXH44_07590 PF01295 Adenylate cyclase, class-I EXH44_07590 PF12633 Adenylate cyclase NT domain EXH44_07595 PF02254 TrkA-N domain EXH44_07595 PF00999 Sodium/hydrogen exchanger family EXH44_07600 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EXH44_07600 PF01578 Cytochrome C assembly protein EXH44_07605 PF08534 Redoxin EXH44_07610 PF03918 Cytochrome C biogenesis protein EXH44_07615 PF03918 Cytochrome C biogenesis protein EXH44_07620 PF03848 Tellurite resistance protein TehB EXH44_07620 PF09313 Domain of unknown function (DUF1971) EXH44_07625 PF01613 Flavin reductase like domain EXH44_07630 PF04269 Protein of unknown function, DUF440 EXH44_07635 PF12762 ISXO2-like transposase domain EXH44_07640 PF02635 DsrE/DsrF-like family EXH44_07645 PF03966 Trm112p-like protein EXH44_07650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EXH44_07655 PF10431 C-terminal, D2-small domain, of ClpB protein EXH44_07655 PF06689 ClpX C4-type zinc finger EXH44_07655 PF07724 AAA domain (Cdc48 subfamily) EXH44_07660 PF00574 Clp protease EXH44_07665 PF02657 Fe-S metabolism associated domain EXH44_07675 PF04055 Radical SAM superfamily EXH44_07700 PF00749 tRNA synthetases class I (E and Q), catalytic domain EXH44_07710 PF04488 Glycosyltransferase sugar-binding region containing DXD motif EXH44_07715 PF00883 Cytosol aminopeptidase family, catalytic domain EXH44_07715 PF12404 Peptidase EXH44_07720 PF00175 Oxidoreductase NAD-binding domain EXH44_07720 PF00970 Oxidoreductase FAD-binding domain EXH44_07720 PF00042 Globin EXH44_07725 PF02082 Transcriptional regulator EXH44_07730 PF02646 RmuC family EXH44_07735 PF00117 Glutamine amidotransferase class-I EXH44_07745 PF16916 Dimerisation domain of Zinc Transporter EXH44_07745 PF01545 Cation efflux family EXH44_07750 PF16916 Dimerisation domain of Zinc Transporter EXH44_07750 PF01545 Cation efflux family EXH44_07755 PF00425 chorismate binding enzyme EXH44_07760 PF01063 Amino-transferase class IV EXH44_07765 PF00154 recA bacterial DNA recombination protein EXH44_07770 PF02631 RecX family EXH44_07780 PF01396 Topoisomerase DNA binding C4 zinc finger EXH44_07785 PF01300 Telomere recombination EXH44_07790 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EXH44_07790 PF01488 Shikimate / quinate 5-dehydrogenase EXH44_07790 PF08501 Shikimate dehydrogenase substrate binding domain EXH44_07815 PF04380 Membrane fusogenic activity EXH44_07820 PF00342 Phosphoglucose isomerase EXH44_07830 PF01259 SAICAR synthetase EXH44_07835 PF08029 HisG, C-terminal domain EXH44_07835 PF01634 ATP phosphoribosyltransferase EXH44_07840 PF00815 Histidinol dehydrogenase EXH44_07845 PF00155 Aminotransferase class I and II EXH44_07855 PF00475 Imidazoleglycerol-phosphate dehydratase EXH44_07860 PF05675 Protein of unknown function (DUF817) EXH44_07875 PF00117 Glutamine amidotransferase class-I EXH44_07880 PF00977 Histidine biosynthesis protein EXH44_07885 PF00977 Histidine biosynthesis protein EXH44_07890 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EXH44_07890 PF01502 Phosphoribosyl-AMP cyclohydrolase EXH44_07895 PF01207 Dihydrouridine synthase (Dus) EXH44_07905 PF00166 Chaperonin 10 Kd subunit EXH44_07910 PF00118 TCP-1/cpn60 chaperonin family EXH44_07915 PF01578 Cytochrome C assembly protein EXH44_07915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EXH44_07920 PF03100 CcmE EXH44_07925 PF01306 LacY proton/sugar symporter EXH44_07930 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EXH44_07930 PF00703 Glycosyl hydrolases family 2 EXH44_07930 PF16353 Domain of unknown function(DUF4981) EXH44_07930 PF02837 Glycosyl hydrolases family 2, sugar binding domain EXH44_07930 PF02929 Beta galactosidase small chain EXH44_07935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EXH44_07935 PF00356 Bacterial regulatory proteins, lacI family EXH44_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_07940 PF03466 LysR substrate binding domain EXH44_07945 PF07681 DoxX EXH44_07955 PF03960 ArsC family EXH44_07960 PF01758 Sodium Bile acid symporter family EXH44_07965 PF03193 RsgA GTPase EXH44_07970 PF01297 Zinc-uptake complex component A periplasmic EXH44_07975 PF13936 Helix-turn-helix domain EXH44_07975 PF00665 Integrase core domain EXH44_07980 PF00005 ABC transporter EXH44_07985 PF00950 ABC 3 transport family EXH44_07990 PF00950 ABC 3 transport family EXH44_07995 PF01554 MatE EXH44_08000 PF00849 RNA pseudouridylate synthase EXH44_08010 PF00893 Small Multidrug Resistance protein EXH44_08015 PF00005 ABC transporter EXH44_08020 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_08025 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_08045 PF03695 Uncharacterised protein family (UPF0149) EXH44_08050 PF05164 Cell division protein ZapA EXH44_08060 PF01812 5-formyltetrahydrofolate cyclo-ligase family EXH44_08065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EXH44_08065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EXH44_08070 PF00080 Copper/zinc superoxide dismutase (SODC) EXH44_08075 PF02687 FtsX-like permease family EXH44_08075 PF12704 MacB-like periplasmic core domain EXH44_08085 PF01625 Peptide methionine sulfoxide reductase EXH44_08085 PF08534 Redoxin EXH44_08085 PF01641 SelR domain EXH44_08090 PF01521 Iron-sulphur cluster biosynthesis EXH44_08090 PF01106 NifU-like domain EXH44_08095 PF11973 NQRA C-terminal domain EXH44_08095 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EXH44_08100 PF03116 NQR2, RnfD, RnfE family EXH44_08105 PF04205 FMN-binding domain EXH44_08110 PF02508 Rnf-Nqr subunit, membrane protein EXH44_08115 PF02508 Rnf-Nqr subunit, membrane protein EXH44_08120 PF00175 Oxidoreductase NAD-binding domain EXH44_08120 PF00970 Oxidoreductase FAD-binding domain EXH44_08120 PF00111 2Fe-2S iron-sulfur cluster binding domain EXH44_08125 PF02424 ApbE family EXH44_08130 PF04400 (Na+)-NQR maturation NqrM EXH44_08140 PF00365 Phosphofructokinase EXH44_08145 PF00266 Aminotransferase class-V EXH44_08150 PF00565 Staphylococcal nuclease homologue EXH44_08160 PF01250 Ribosomal protein S6 EXH44_08165 PF00436 Single-strand binding protein family EXH44_08170 PF01084 Ribosomal protein S18 EXH44_08175 PF03948 Ribosomal protein L9, C-terminal domain EXH44_08175 PF01281 Ribosomal protein L9, N-terminal domain EXH44_08180 PF03605 Anaerobic c4-dicarboxylate membrane transporter EXH44_08185 PF02378 Phosphotransferase system, EIIC EXH44_08185 PF00367 phosphotransferase system, EIIB EXH44_08190 PF03167 Uracil DNA glycosylase superfamily EXH44_08195 PF01228 Glycine radical EXH44_08200 PF00312 Ribosomal protein S15 EXH44_08205 PF00999 Sodium/hydrogen exchanger family EXH44_08210 PF13145 PPIC-type PPIASE domain EXH44_08215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EXH44_08215 PF01872 RibD C-terminal domain EXH44_08220 PF00677 Lumazine binding domain EXH44_08225 PF00925 GTP cyclohydrolase II EXH44_08225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EXH44_08230 PF00885 6,7-dimethyl-8-ribityllumazine synthase EXH44_08235 PF00343 Carbohydrate phosphorylase EXH44_08240 PF00682 HMGL-like EXH44_08240 PF08502 LeuA allosteric (dimerisation) domain EXH44_08250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EXH44_08255 PF09382 RQC domain EXH44_08255 PF16124 RecQ zinc-binding EXH44_08255 PF00570 HRDC domain EXH44_08255 PF00271 Helicase conserved C-terminal domain EXH44_08255 PF00270 DEAD/DEAH box helicase EXH44_08260 PF01491 Frataxin-like domain EXH44_08265 PF01726 LexA DNA binding domain EXH44_08265 PF00717 Peptidase S24-like EXH44_08270 PF07681 DoxX EXH44_08280 PF05114 Protein of unknown function (DUF692) EXH44_08285 PF13936 Helix-turn-helix domain EXH44_08285 PF00665 Integrase core domain EXH44_08290 PF00561 alpha/beta hydrolase fold EXH44_08295 PF13936 Helix-turn-helix domain EXH44_08295 PF00665 Integrase core domain EXH44_08305 PF09836 Putative DNA-binding domain EXH44_08310 PF04542 Sigma-70 region 2 EXH44_08310 PF08281 Sigma-70, region 4 EXH44_08320 PF01553 Acyltransferase EXH44_08325 PF01758 Sodium Bile acid symporter family EXH44_08340 PF00205 Thiamine pyrophosphate enzyme, central domain EXH44_08340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EXH44_08340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EXH44_08345 PF12762 ISXO2-like transposase domain EXH44_08350 PF04186 FxsA cytoplasmic membrane protein EXH44_08365 PF02562 PhoH-like protein EXH44_08370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EXH44_08370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EXH44_08375 PF00860 Permease family EXH44_08385 PF00860 Permease family EXH44_08395 PF04073 Aminoacyl-tRNA editing domain EXH44_08400 PF10063 Uncharacterized integral membrane protein (DUF2301) EXH44_08405 PF00533 BRCA1 C Terminus (BRCT) domain EXH44_08405 PF12826 Helix-hairpin-helix motif EXH44_08405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EXH44_08405 PF03120 NAD-dependent DNA ligase OB-fold domain EXH44_08405 PF01653 NAD-dependent DNA ligase adenylation domain EXH44_08410 PF04354 ZipA, C-terminal FtsZ-binding domain EXH44_08420 PF01432 Peptidase family M3 EXH44_08430 PF00800 Prephenate dehydratase EXH44_08430 PF01817 Chorismate mutase type II EXH44_08435 PF00849 RNA pseudouridylate synthase EXH44_08440 PF01370 NAD dependent epimerase/dehydratase family EXH44_08445 PF07690 Major Facilitator Superfamily EXH44_08450 PF00270 DEAD/DEAH box helicase EXH44_08450 PF00271 Helicase conserved C-terminal domain EXH44_08455 PF00583 Acetyltransferase (GNAT) family EXH44_08465 PF05175 Methyltransferase small domain EXH44_08465 PF08468 Methyltransferase small domain N-terminal EXH44_08470 PF01195 Peptidyl-tRNA hydrolase EXH44_08475 PF06071 Protein of unknown function (DUF933) EXH44_08475 PF01926 50S ribosome-binding GTPase EXH44_08500 PF07715 TonB-dependent Receptor Plug Domain EXH44_08500 PF00593 TonB dependent receptor EXH44_08505 PF00149 Calcineurin-like phosphoesterase EXH44_08510 PF06628 Catalase-related immune-responsive EXH44_08510 PF00199 Catalase EXH44_08525 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_08530 PF02789 Cytosol aminopeptidase family, N-terminal domain EXH44_08530 PF00883 Cytosol aminopeptidase family, catalytic domain EXH44_08535 PF17912 MalK OB fold domain EXH44_08535 PF00005 ABC transporter EXH44_08540 PF01112 Asparaginase EXH44_08550 PF03932 CutC family EXH44_08555 PF01263 Aldose 1-epimerase EXH44_08560 PF10509 Galactokinase galactose-binding signature EXH44_08560 PF00288 GHMP kinases N terminal domain EXH44_08560 PF08544 GHMP kinases C terminal EXH44_08565 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EXH44_08565 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EXH44_08570 PF00842 Alanine racemase, C-terminal domain EXH44_08570 PF01168 Alanine racemase, N-terminal domain EXH44_08575 PF01145 SPFH domain / Band 7 family EXH44_08575 PF16200 C-terminal region of band_7 EXH44_08595 PF17764 3′ DNA-binding domain (3′BD) EXH44_08595 PF00271 Helicase conserved C-terminal domain EXH44_08595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EXH44_08595 PF00270 DEAD/DEAH box helicase EXH44_08595 PF18074 Primosomal protein N C-terminal domain EXH44_08600 PF01810 LysE type translocator EXH44_08605 PF00892 EamA-like transporter family EXH44_08610 PF00892 EamA-like transporter family EXH44_08615 PF00155 Aminotransferase class I and II EXH44_08620 PF00425 chorismate binding enzyme EXH44_08625 PF11412 Disulphide bond corrector protein DsbC EXH44_08625 PF02683 Cytochrome C biogenesis protein transmembrane region EXH44_08625 PF13098 Thioredoxin-like domain EXH44_08630 PF00106 short chain dehydrogenase EXH44_08635 PF03956 Lysine exporter LysO EXH44_08640 PF11798 IMS family HHH motif EXH44_08640 PF00817 impB/mucB/samB family EXH44_08640 PF11799 impB/mucB/samB family C-terminal domain EXH44_08645 PF01435 Peptidase family M48 EXH44_08650 PF03575 Peptidase family S51 EXH44_08655 PF03606 C4-dicarboxylate anaerobic carrier EXH44_08660 PF01546 Peptidase family M20/M25/M40 EXH44_08660 PF07687 Peptidase dimerisation domain EXH44_08670 PF02592 Putative vitamin uptake transporter EXH44_08675 PF01594 AI-2E family transporter EXH44_08685 PF00109 Beta-ketoacyl synthase, N-terminal domain EXH44_08685 PF02801 Beta-ketoacyl synthase, C-terminal domain EXH44_08690 PF00709 Adenylosuccinate synthetase EXH44_08695 PF01145 SPFH domain / Band 7 family EXH44_08700 PF01145 SPFH domain / Band 7 family EXH44_08705 PF12706 Beta-lactamase superfamily domain EXH44_08710 PF00860 Permease family EXH44_08715 PF00085 Thioredoxin EXH44_08720 PF01513 ATP-NAD kinase EXH44_08725 PF00939 Sodium:sulfate symporter transmembrane region EXH44_08730 PF01476 LysM domain EXH44_08730 PF01520 N-acetylmuramoyl-L-alanine amidase EXH44_08735 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EXH44_08740 PF00929 Exonuclease EXH44_08745 PF01467 Cytidylyltransferase-like EXH44_08750 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EXH44_08750 PF00534 Glycosyl transferases group 1 EXH44_08755 PF02811 PHP domain EXH44_08755 PF14579 Helix-hairpin-helix motif EXH44_08755 PF01336 OB-fold nucleic acid binding domain EXH44_08755 PF07733 Bacterial DNA polymerase III alpha NTPase domain EXH44_08755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EXH44_08760 PF03739 Lipopolysaccharide export system permease LptF/LptG EXH44_08765 PF03739 Lipopolysaccharide export system permease LptF/LptG EXH44_08770 PF00883 Cytosol aminopeptidase family, catalytic domain EXH44_08770 PF02789 Cytosol aminopeptidase family, N-terminal domain EXH44_08780 PF08402 TOBE domain EXH44_08780 PF00005 ABC transporter EXH44_08795 PF01252 Signal peptidase (SPase) II EXH44_08805 PF13411 MerR HTH family regulatory protein EXH44_08810 PF16916 Dimerisation domain of Zinc Transporter EXH44_08810 PF01545 Cation efflux family EXH44_08815 PF00708 Acylphosphatase EXH44_08820 PF02508 Rnf-Nqr subunit, membrane protein EXH44_08825 PF04060 Putative Fe-S cluster EXH44_08830 PF12838 4Fe-4S dicluster domain EXH44_08830 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EXH44_08830 PF13375 RnfC Barrel sandwich hybrid domain EXH44_08835 PF03458 UPF0126 domain EXH44_08840 PF03116 NQR2, RnfD, RnfE family EXH44_08845 PF04205 FMN-binding domain EXH44_08850 PF02508 Rnf-Nqr subunit, membrane protein EXH44_08855 PF03279 Bacterial lipid A biosynthesis acyltransferase EXH44_08860 PF08241 Methyltransferase domain EXH44_08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase EXH44_08870 PF00814 Glycoprotease family EXH44_08875 PF05198 Translation initiation factor IF-3, N-terminal domain EXH44_08875 PF00707 Translation initiation factor IF-3, C-terminal domain EXH44_08880 PF01632 Ribosomal protein L35 EXH44_08885 PF00453 Ribosomal protein L20 EXH44_08895 PF07687 Peptidase dimerisation domain EXH44_08895 PF01546 Peptidase family M20/M25/M40 EXH44_08900 PF00156 Phosphoribosyl transferase domain EXH44_08905 PF00625 Guanylate kinase EXH44_08910 PF02321 Outer membrane efflux protein EXH44_08915 PF02926 THUMP domain EXH44_08915 PF02568 Thiamine biosynthesis protein (ThiI) EXH44_08920 PF02698 DUF218 domain EXH44_08925 PF04230 Polysaccharide pyruvyl transferase EXH44_08930 PF02348 Cytidylyltransferase EXH44_08935 PF01943 Polysaccharide biosynthesis protein EXH44_08940 PF07922 Glycosyltransferase family 52 EXH44_08945 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) EXH44_08955 PF00535 Glycosyl transferase family 2 EXH44_08960 PF00535 Glycosyl transferase family 2 EXH44_08965 PF02545 Maf-like protein EXH44_08970 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EXH44_08970 PF06144 DNA polymerase III, delta subunit EXH44_08975 PF04390 Lipopolysaccharide-assembly EXH44_08980 PF13603 Leucyl-tRNA synthetase, Domain 2 EXH44_08980 PF00133 tRNA synthetases class I (I, L, M and V) EXH44_08980 PF08264 Anticodon-binding domain of tRNA EXH44_08985 PF01206 Sulfurtransferase TusA EXH44_08990 PF04143 Sulphur transport EXH44_08995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EXH44_08995 PF03129 Anticodon binding domain EXH44_08995 PF02824 TGS domain EXH44_08995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EXH44_09005 PF00462 Glutaredoxin EXH44_09010 PF00005 ABC transporter EXH44_09010 PF12848 ABC transporter EXH44_09015 PF13525 Outer membrane lipoprotein EXH44_09020 PF00849 RNA pseudouridylate synthase EXH44_09020 PF01479 S4 domain EXH44_09025 PF14256 YwiC-like protein EXH44_09030 PF00005 ABC transporter EXH44_09030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_09035 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_09040 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_09045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_09050 PF00303 Thymidylate synthase EXH44_09060 PF01066 CDP-alcohol phosphatidyltransferase EXH44_09065 PF08459 UvrC Helix-hairpin-helix N-terminal EXH44_09065 PF02151 UvrB/uvrC motif EXH44_09065 PF01541 GIY-YIG catalytic domain EXH44_09070 PF04399 Glutaredoxin 2, C terminal domain EXH44_09070 PF13417 Glutathione S-transferase, N-terminal domain EXH44_09075 PF10672 S-adenosylmethionine-dependent methyltransferase EXH44_09075 PF02926 THUMP domain EXH44_09075 PF01170 Putative RNA methylase family UPF0020 EXH44_09080 PF00588 SpoU rRNA Methylase family EXH44_09085 PF03544 Gram-negative bacterial TonB protein C-terminal EXH44_09090 PF02472 Biopolymer transport protein ExbD/TolR EXH44_09095 PF01618 MotA/TolQ/ExbB proton channel family EXH44_09100 PF00581 Rhodanese-like domain EXH44_09105 PF01343 Peptidase family S49 EXH44_09105 PF08496 Peptidase family S49 N-terminal EXH44_09110 PF01207 Dihydrouridine synthase (Dus) EXH44_09115 PF02954 Bacterial regulatory protein, Fis family EXH44_09125 PF05958 tRNA (Uracil-5-)-methyltransferase EXH44_09130 PF00933 Glycosyl hydrolase family 3 N terminal domain EXH44_09135 PF03741 Integral membrane protein TerC family EXH44_09140 PF02976 DNA mismatch repair enzyme MutH EXH44_09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_09145 PF00183 Hsp90 protein EXH44_09150 PF10415 Fumarase C C-terminus EXH44_09150 PF00206 Lyase EXH44_09155 PF04076 Bacterial OB fold (BOF) protein EXH44_09160 PF04076 Bacterial OB fold (BOF) protein EXH44_09165 PF00551 Formyl transferase EXH44_09170 PF02769 AIR synthase related protein, C-terminal domain EXH44_09170 PF00586 AIR synthase related protein, N-terminal domain EXH44_09175 PF01258 Prokaryotic dksA/traR C4-type zinc finger EXH44_09180 PF12626 Polymerase A arginine-rich C-terminus EXH44_09180 PF12627 Probable RNA and SrmB- binding site of polymerase A EXH44_09180 PF01743 Poly A polymerase head domain EXH44_09185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EXH44_09195 PF00899 ThiF family EXH44_09205 PF01510 N-acetylmuramoyl-L-alanine amidase EXH44_09210 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EXH44_09215 PF00156 Phosphoribosyl transferase domain EXH44_09220 PF02595 Glycerate kinase family EXH44_09225 PF00005 ABC transporter EXH44_09230 PF02653 Branched-chain amino acid transport system / permease component EXH44_09240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EXH44_09240 PF02403 Seryl-tRNA synthetase N-terminal domain EXH44_09250 PF01668 SmpB protein EXH44_09255 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EXH44_09260 PF00571 CBS domain EXH44_09260 PF03471 Transporter associated domain EXH44_09265 PF00795 Carbon-nitrogen hydrolase EXH44_09270 PF08281 Sigma-70, region 4 EXH44_09270 PF04542 Sigma-70 region 2 EXH44_09275 PF03872 Anti sigma-E protein RseA, N-terminal domain EXH44_09275 PF03873 Anti sigma-E protein RseA, C-terminal domain EXH44_09280 PF01928 CYTH domain EXH44_09290 PF03701 Uncharacterised protein family (UPF0181) EXH44_09300 PF00849 RNA pseudouridylate synthase EXH44_09305 PF04287 tRNA pseudouridine synthase C EXH44_09310 PF00218 Indole-3-glycerol phosphate synthase EXH44_09310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EXH44_09315 PF13307 Helicase C-terminal domain EXH44_09315 PF06733 DEAD_2 EXH44_09320 PF03788 LrgA family EXH44_09325 PF04172 LrgB-like family EXH44_09330 PF00005 ABC transporter EXH44_09330 PF00664 ABC transporter transmembrane region EXH44_09335 PF02779 Transketolase, pyrimidine binding domain EXH44_09335 PF02780 Transketolase, C-terminal domain EXH44_09335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EXH44_09340 PF00459 Inositol monophosphatase family EXH44_09345 PF00588 SpoU rRNA Methylase family EXH44_09345 PF08032 RNA 2'-O ribose methyltransferase substrate binding EXH44_09360 PF00589 Phage integrase family EXH44_09360 PF13356 Arm DNA-binding domain EXH44_09370 PF00005 ABC transporter EXH44_09370 PF03459 TOBE domain EXH44_09375 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_09385 PF03459 TOBE domain EXH44_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EXH44_09390 PF00521 DNA gyrase/topoisomerase IV, subunit A EXH44_09390 PF03989 DNA gyrase C-terminal domain, beta-propeller EXH44_09425 PF00809 Pterin binding enzyme EXH44_09425 PF02310 B12 binding domain EXH44_09425 PF02965 Vitamin B12 dependent methionine synthase, activation domain EXH44_09425 PF02607 B12 binding domain EXH44_09425 PF02574 Homocysteine S-methyltransferase EXH44_09435 PF12762 ISXO2-like transposase domain EXH44_09460 PF06421 GTP-binding protein LepA C-terminus EXH44_09460 PF00009 Elongation factor Tu GTP binding domain EXH44_09460 PF03144 Elongation factor Tu domain 2 EXH44_09460 PF00679 Elongation factor G C-terminus EXH44_09465 PF10502 Signal peptidase, peptidase S26 EXH44_09470 PF00035 Double-stranded RNA binding motif EXH44_09470 PF14622 Ribonuclease-III-like EXH44_09475 PF01926 50S ribosome-binding GTPase EXH44_09475 PF07650 KH domain EXH44_09485 PF02565 Recombination protein O C terminal EXH44_09485 PF11967 Recombination protein O N terminal EXH44_09490 PF00561 alpha/beta hydrolase fold EXH44_09495 PF12833 Helix-turn-helix domain EXH44_09495 PF02311 AraC-like ligand binding domain EXH44_09500 PF04976 DMSO reductase anchor subunit (DmsC) EXH44_09505 PF13247 4Fe-4S dicluster domain EXH44_09505 PF12800 4Fe-4S binding domain EXH44_09510 PF00384 Molybdopterin oxidoreductase EXH44_09510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EXH44_09510 PF01568 Molydopterin dinucleotide binding domain EXH44_09515 PF00892 EamA-like transporter family EXH44_09520 PF02698 DUF218 domain EXH44_09525 PF03553 Na+/H+ antiporter family EXH44_09535 PF00816 H-NS histone family EXH44_09540 PF00551 Formyl transferase EXH44_09540 PF01842 ACT domain EXH44_09545 PF00075 RNase H EXH44_09550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_09555 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_09560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_09560 PF00005 ABC transporter EXH44_09565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EXH44_09565 PF00005 ABC transporter EXH44_09570 PF02910 Fumarate reductase flavoprotein C-term EXH44_09570 PF00890 FAD binding domain EXH44_09575 PF02674 Colicin V production protein EXH44_09580 PF00156 Phosphoribosyl transferase domain EXH44_09590 PF02803 Thiolase, C-terminal domain EXH44_09590 PF00108 Thiolase, N-terminal domain EXH44_09595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EXH44_09595 PF00378 Enoyl-CoA hydratase/isomerase EXH44_09595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EXH44_09605 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EXH44_09605 PF18381 YcaO cyclodehydratase C-terminal domain EXH44_09610 PF00575 S1 RNA binding domain EXH44_09610 PF10150 Ribonuclease E/G family EXH44_09615 PF13416 Bacterial extracellular solute-binding protein EXH44_09625 PF03968 OstA-like protein EXH44_09630 PF12399 Branched-chain amino acid ATP-binding cassette transporter EXH44_09630 PF00005 ABC transporter EXH44_09635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EXH44_09640 PF03668 P-loop ATPase protein family EXH44_09645 PF01494 FAD binding domain EXH44_09655 PF04220 Der GTPase activator (YihI) EXH44_09660 PF10675 Protein of unknown function (DUF2489) EXH44_09665 PF06969 HemN C-terminal domain EXH44_09665 PF04055 Radical SAM superfamily EXH44_09670 PF04453 LPS transport system D EXH44_09670 PF03968 OstA-like protein EXH44_09675 PF00288 GHMP kinases N terminal domain EXH44_09675 PF08544 GHMP kinases C terminal EXH44_09680 PF03447 Homoserine dehydrogenase, NAD binding domain EXH44_09680 PF01842 ACT domain EXH44_09680 PF13840 ACT domain EXH44_09680 PF00696 Amino acid kinase family EXH44_09680 PF00742 Homoserine dehydrogenase EXH44_09685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EXH44_09685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EXH44_09690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EXH44_09690 PF13288 DXP reductoisomerase C-terminal domain EXH44_09690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EXH44_09695 PF04607 Region found in RelA / SpoT proteins EXH44_09695 PF02824 TGS domain EXH44_09695 PF13291 ACT domain EXH44_09700 PF01488 Shikimate / quinate 5-dehydrogenase EXH44_09700 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EXH44_09700 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EXH44_09735 PF02146 Sir2 family EXH44_09760 PF02146 Sir2 family EXH44_09765 PF02146 Sir2 family EXH44_09795 PF06226 Protein of unknown function (DUF1007) EXH44_09800 PF03824 High-affinity nickel-transport protein EXH44_09805 PF01235 Sodium:alanine symporter family EXH44_09810 PF00593 TonB dependent receptor EXH44_09810 PF07715 TonB-dependent Receptor Plug Domain EXH44_09820 PF01032 FecCD transport family EXH44_09825 PF00005 ABC transporter EXH44_09830 PF04317 YcjX-like family, DUF463 EXH44_09835 PF01494 FAD binding domain EXH44_09840 PF02769 AIR synthase related protein, C-terminal domain EXH44_09840 PF00586 AIR synthase related protein, N-terminal domain EXH44_09845 PF03364 Polyketide cyclase / dehydrase and lipid transport EXH44_09850 PF03658 RnfH family Ubiquitin EXH44_09855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EXH44_09855 PF01926 50S ribosome-binding GTPase EXH44_09860 PF00294 pfkB family carbohydrate kinase EXH44_09860 PF01467 Cytidylyltransferase-like EXH44_09865 PF00639 PPIC-type PPIASE domain EXH44_09865 PF09312 SurA N-terminal domain EXH44_09870 PF00398 Ribosomal RNA adenine dimethylase EXH44_09880 PF00899 ThiF family EXH44_09885 PF00994 Probable molybdopterin binding domain EXH44_09885 PF03454 MoeA C-terminal region (domain IV) EXH44_09885 PF03453 MoeA N-terminal region (domain I and II) EXH44_09890 PF01914 MarC family integral membrane protein EXH44_09910 PF13378 Enolase C-terminal domain-like EXH44_09920 PF01042 Endoribonuclease L-PSP EXH44_09925 PF04245 37-kD nucleoid-associated bacterial protein EXH44_09930 PF04355 SmpA / OmlA family EXH44_09935 PF02350 UDP-N-acetylglucosamine 2-epimerase EXH44_09940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EXH44_09940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EXH44_09940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EXH44_09945 PF01386 Ribosomal L25p family EXH44_09950 PF00343 Carbohydrate phosphorylase EXH44_09955 PF01464 Transglycosylase SLT domain EXH44_09955 PF14718 Soluble lytic murein transglycosylase L domain EXH44_09960 PF00156 Phosphoribosyl transferase domain EXH44_09975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EXH44_09975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EXH44_09980 PF03616 Sodium/glutamate symporter EXH44_09985 PF02080 TrkA-C domain EXH44_09985 PF06826 Predicted Permease Membrane Region EXH44_09995 PF01546 Peptidase family M20/M25/M40 EXH44_09995 PF07687 Peptidase dimerisation domain EXH44_10005 PF02772 S-adenosylmethionine synthetase, central domain EXH44_10005 PF02773 S-adenosylmethionine synthetase, C-terminal domain EXH44_10005 PF00438 S-adenosylmethionine synthetase, N-terminal domain EXH44_10010 PF01026 TatD related DNase EXH44_10015 PF00004 ATPase family associated with various cellular activities (AAA) EXH44_10015 PF10431 C-terminal, D2-small domain, of ClpB protein EXH44_10015 PF02861 Clp amino terminal domain, pathogenicity island component EXH44_10015 PF17871 AAA lid domain EXH44_10015 PF07724 AAA domain (Cdc48 subfamily) EXH44_10025 PF13173 AAA domain EXH44_10025 PF13635 Domain of unknown function (DUF4143) EXH44_10040 PF02384 N-6 DNA Methylase EXH44_10040 PF12161 HsdM N-terminal domain EXH44_10060 PF11867 Domain of unknown function (DUF3387) EXH44_10060 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EXH44_10060 PF18766 SWI2/SNF2 ATPase EXH44_10070 PF13173 AAA domain EXH44_10070 PF13635 Domain of unknown function (DUF4143) EXH44_10085 PF13533 Biotin-lipoyl like EXH44_10100 PF03971 Monomeric isocitrate dehydrogenase EXH44_10105 PF01027 Inhibitor of apoptosis-promoting Bax1 EXH44_10110 PF04358 DsrC like protein EXH44_10115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EXH44_10120 PF00793 DAHP synthetase I family EXH44_10125 PF02153 Prephenate dehydrogenase EXH44_10125 PF01817 Chorismate mutase type II EXH44_10130 PF00694 Aconitase C-terminal domain EXH44_10135 PF00330 Aconitase family (aconitate hydratase) EXH44_10140 PF07690 Major Facilitator Superfamily EXH44_10145 PF00849 RNA pseudouridylate synthase EXH44_10145 PF01479 S4 domain EXH44_10150 PF01914 MarC family integral membrane protein EXH44_10155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EXH44_10160 PF10609 NUBPL iron-transfer P-loop NTPase EXH44_10170 PF02441 Flavoprotein EXH44_10175 PF01171 PP-loop family EXH44_10180 PF03553 Na+/H+ antiporter family EXH44_10180 PF13726 Na+-H+ antiporter family EXH44_10185 PF03372 Endonuclease/Exonuclease/phosphatase family EXH44_10190 PF03222 Tryptophan/tyrosine permease family EXH44_10195 PF01037 Lrp/AsnC ligand binding domain EXH44_10200 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EXH44_10200 PF17854 FtsK alpha domain EXH44_10200 PF09397 Ftsk gamma domain EXH44_10200 PF01580 FtsK/SpoIIIE family EXH44_10205 PF04228 Putative neutral zinc metallopeptidase EXH44_10210 PF00793 DAHP synthetase I family EXH44_10215 PF00814 Glycoprotease family EXH44_10220 PF00889 Elongation factor TS EXH44_10225 PF00318 Ribosomal protein S2 EXH44_10230 PF12804 MobA-like NTP transferase domain EXH44_10230 PF00132 Bacterial transferase hexapeptide (six repeats) EXH44_10235 PF00873 AcrB/AcrD/AcrF family EXH44_10240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EXH44_10245 PF00440 Bacterial regulatory proteins, tetR family EXH44_10250 PF01808 AICARFT/IMPCHase bienzyme EXH44_10250 PF02142 MGS-like domain EXH44_10260 PF12762 ISXO2-like transposase domain EXH44_10270 PF06062 Uncharacterised protein family (UPF0231) EXH44_10275 PF17760 UvrA interaction domain EXH44_10275 PF17755 UvrA DNA-binding domain EXH44_10280 PF00436 Single-strand binding protein family EXH44_10290 PF01636 Phosphotransferase enzyme family EXH44_10315 PF13411 MerR HTH family regulatory protein EXH44_10325 PF00376 MerR family regulatory protein EXH44_10325 PF09278 MerR, DNA binding EXH44_10335 PF04945 YHS domain EXH44_10350 PF07731 Multicopper oxidase EXH44_10350 PF07732 Multicopper oxidase EXH44_10375 PF00486 Transcriptional regulatory protein, C terminal EXH44_10375 PF00072 Response regulator receiver domain EXH44_10380 PF00672 HAMP domain EXH44_10380 PF00512 His Kinase A (phospho-acceptor) domain EXH44_10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_10400 PF02384 N-6 DNA Methylase EXH44_10400 PF12161 HsdM N-terminal domain EXH44_10420 PF13742 OB-fold nucleic acid binding domain EXH44_10420 PF02601 Exonuclease VII, large subunit EXH44_10425 PF01765 Ribosome recycling factor EXH44_10430 PF13580 SIS domain EXH44_10435 PF00484 Carbonic anhydrase EXH44_10440 PF00313 'Cold-shock' DNA-binding domain EXH44_10450 PF03548 Outer membrane lipoprotein carrier protein LolA EXH44_10455 PF01371 Trp repressor protein EXH44_10460 PF00912 Transglycosylase EXH44_10465 PF00881 Nitroreductase family EXH44_10470 PF08443 RimK-like ATP-grasp domain EXH44_10470 PF18030 RimK PreATP-grasp domain EXH44_10475 PF17192 MukF middle domain EXH44_10475 PF17193 MukF C-terminal domain EXH44_10475 PF03882 MukF winged-helix domain EXH44_10480 PF04288 MukE-like family EXH44_10485 PF04310 MukB N-terminal EXH44_10485 PF16330 MukB hinge domain EXH44_10490 PF01113 Dihydrodipicolinate reductase, N-terminus EXH44_10490 PF05173 Dihydrodipicolinate reductase, C-terminus EXH44_10495 PF01053 Cys/Met metabolism PLP-dependent enzyme EXH44_10500 PF02629 CoA binding domain EXH44_10500 PF00549 CoA-ligase EXH44_10505 PF00549 CoA-ligase EXH44_10505 PF08442 ATP-grasp domain EXH44_10510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EXH44_10510 PF00364 Biotin-requiring enzyme EXH44_10510 PF02817 e3 binding domain EXH44_10515 PF02779 Transketolase, pyrimidine binding domain EXH44_10515 PF16870 2-oxoglutarate dehydrogenase C-terminal EXH44_10515 PF16078 2-oxoglutarate dehydrogenase N-terminus EXH44_10515 PF00676 Dehydrogenase E1 component EXH44_10520 PF01810 LysE type translocator EXH44_10525 PF00485 Phosphoribulokinase / Uridine kinase family EXH44_10530 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) EXH44_10535 PF03222 Tryptophan/tyrosine permease family EXH44_10540 PF07690 Major Facilitator Superfamily EXH44_10555 PF08239 Bacterial SH3 domain EXH44_10560 PF01384 Phosphate transporter family EXH44_10565 PF01865 Protein of unknown function DUF47 EXH44_10570 PF01409 tRNA synthetases class II core domain (F) EXH44_10570 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EXH44_10575 PF01588 Putative tRNA binding domain EXH44_10575 PF03147 Ferredoxin-fold anticodon binding domain EXH44_10575 PF03484 tRNA synthetase B5 domain EXH44_10575 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EXH44_10575 PF03483 B3/4 domain EXH44_10580 PF00216 Bacterial DNA-binding protein EXH44_10585 PF00877 NlpC/P60 family EXH44_10590 PF09335 SNARE associated Golgi protein EXH44_10595 PF00356 Bacterial regulatory proteins, lacI family EXH44_10600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EXH44_10600 PF01266 FAD dependent oxidoreductase EXH44_10605 PF03562 MltA specific insert domain EXH44_10605 PF06725 3D domain EXH44_10620 PF00464 Serine hydroxymethyltransferase EXH44_10625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EXH44_10625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EXH44_10630 PF00271 Helicase conserved C-terminal domain EXH44_10630 PF00270 DEAD/DEAH box helicase EXH44_10635 PF05872 Bacterial protein of unknown function (DUF853) EXH44_10645 PF04216 Protein involved in formate dehydrogenase formation EXH44_10650 PF13687 Domain of unknown function (DUF4153) EXH44_10655 PF12762 ISXO2-like transposase domain EXH44_10660 PF13687 Domain of unknown function (DUF4153) EXH44_10665 PF00884 Sulfatase EXH44_10665 PF11893 Domain of unknown function (DUF3413) EXH44_10670 PF07208 Protein of unknown function (DUF1414) EXH44_10675 PF13649 Methyltransferase domain EXH44_10680 PF00204 DNA gyrase B EXH44_10680 PF00986 DNA gyrase B subunit, carboxyl terminus EXH44_10680 PF18053 DNA gyrase B subunit insert domain EXH44_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EXH44_10680 PF01751 Toprim domain EXH44_10690 PF01814 Hemerythrin HHE cation binding domain EXH44_10695 PF01702 Queuine tRNA-ribosyltransferase EXH44_10705 PF08402 TOBE domain EXH44_10705 PF00005 ABC transporter EXH44_10710 PF00528 Binding-protein-dependent transport system inner membrane component EXH44_10715 PF00117 Glutamine amidotransferase class-I EXH44_10715 PF02540 NAD synthase EXH44_10715 PF00958 GMP synthase C terminal domain EXH44_10720 PF08942 Domain of unknown function (DUF1919) EXH44_10730 PF00478 IMP dehydrogenase / GMP reductase domain EXH44_10730 PF00571 CBS domain EXH44_10735 PF08323 Starch synthase catalytic domain EXH44_10735 PF00534 Glycosyl transferases group 1 EXH44_10740 PF00483 Nucleotidyl transferase EXH44_10745 PF00128 Alpha amylase, catalytic domain EXH44_10745 PF18390 Glycogen debranching enzyme C-terminal domain EXH44_10745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EXH44_10750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EXH44_10750 PF02806 Alpha amylase, C-terminal all-beta domain EXH44_10750 PF00128 Alpha amylase, catalytic domain EXH44_10755 PF00202 Aminotransferase class-III EXH44_10760 PF00696 Amino acid kinase family EXH44_10765 PF01118 Semialdehyde dehydrogenase, NAD binding domain EXH44_10770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EXH44_10780 PF12762 ISXO2-like transposase domain EXH44_10785 PF01367 5'-3' exonuclease, C-terminal SAM fold EXH44_10785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EXH44_10785 PF00476 DNA polymerase family A EXH44_10785 PF01612 3'-5' exonuclease EXH44_10790 PF10369 Small subunit of acetolactate synthase EXH44_10795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EXH44_10795 PF00205 Thiamine pyrophosphate enzyme, central domain EXH44_10795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EXH44_10800 PF03949 Malic enzyme, NAD binding domain EXH44_10800 PF01515 Phosphate acetyl/butaryl transferase EXH44_10800 PF00390 Malic enzyme, N-terminal domain EXH44_10820 PF00521 DNA gyrase/topoisomerase IV, subunit A EXH44_10820 PF03989 DNA gyrase C-terminal domain, beta-propeller EXH44_10825 PF07690 Major Facilitator Superfamily EXH44_10835 PF02576 RimP N-terminal domain EXH44_10835 PF17384 RimP C-terminal SH3 domain EXH44_10840 PF13184 NusA-like KH domain EXH44_10840 PF08529 NusA N-terminal domain EXH44_10840 PF00575 S1 RNA binding domain EXH44_10845 PF11987 Translation-initiation factor 2 EXH44_10845 PF00009 Elongation factor Tu GTP binding domain EXH44_10845 PF04760 Translation initiation factor IF-2, N-terminal region EXH44_10850 PF11742 Protein of unknown function (DUF3302) EXH44_10855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EXH44_10855 PF00529 HlyD membrane-fusion protein of T1SS EXH44_10860 PF13419 Haloacid dehalogenase-like hydrolase EXH44_10865 PF02033 Ribosome-binding factor A EXH44_10870 PF09157 Pseudouridine synthase II TruB, C-terminal EXH44_10870 PF16198 tRNA pseudouridylate synthase B C-terminal domain EXH44_10870 PF01509 TruB family pseudouridylate synthase (N terminal domain) EXH44_10875 PF13406 Transglycosylase SLT domain EXH44_10885 PF06295 Protein of unknown function (DUF1043) EXH44_10890 PF00572 Ribosomal protein L13 EXH44_10895 PF00380 Ribosomal protein S9/S16 EXH44_10900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EXH44_10905 PF03883 Peroxide stress protein YaaA EXH44_10915 PF16916 Dimerisation domain of Zinc Transporter EXH44_10915 PF01545 Cation efflux family EXH44_10920 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) EXH44_10925 PF00075 RNase H EXH44_10930 PF01336 OB-fold nucleic acid binding domain EXH44_10930 PF00152 tRNA synthetases class II (D, K and N) EXH44_10935 PF02541 Ppx/GppA phosphatase family EXH44_10940 PF12762 ISXO2-like transposase domain EXH44_10980 PF04074 YhcH/YjgK/YiaL EXH44_10985 PF01418 Helix-turn-helix domain, rpiR family EXH44_10985 PF01380 SIS domain EXH44_10990 PF00701 Dihydrodipicolinate synthetase family