locus-tag class description D1107_00005 PF00308 Bacterial dnaA protein D1107_00005 PF08299 Bacterial dnaA protein helix-turn-helix D1107_00005 PF11638 DnaA N-terminal domain D1107_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1107_00010 PF02767 DNA polymerase III beta subunit, central domain D1107_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1107_00015 PF02463 RecF/RecN/SMC N terminal domain D1107_00020 PF00080 Copper/zinc superoxide dismutase (SODC) D1107_00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1107_00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1107_00035 PF02684 Lipid-A-disaccharide synthetase D1107_00040 PF01343 Peptidase family S49 D1107_00040 PF08496 Peptidase family S49 N-terminal D1107_00045 PF02381 MraZ protein, putative antitoxin-like D1107_00050 PF01795 MraW methylase family D1107_00055 PF04999 Cell division protein FtsL D1107_00060 PF00905 Penicillin binding protein transpeptidase domain D1107_00060 PF03717 Penicillin-binding Protein dimerisation domain D1107_00065 PF01225 Mur ligase family, catalytic domain D1107_00065 PF02875 Mur ligase family, glutamate ligase domain D1107_00065 PF08245 Mur ligase middle domain D1107_00070 PF01225 Mur ligase family, catalytic domain D1107_00070 PF02875 Mur ligase family, glutamate ligase domain D1107_00070 PF08245 Mur ligase middle domain D1107_00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1107_00075 PF00953 Glycosyl transferase family 4 D1107_00080 PF02875 Mur ligase family, glutamate ligase domain D1107_00080 PF08245 Mur ligase middle domain D1107_00085 PF01098 Cell cycle protein D1107_00090 PF04101 Glycosyltransferase family 28 C-terminal domain D1107_00090 PF03033 Glycosyltransferase family 28 N-terminal domain D1107_00095 PF02875 Mur ligase family, glutamate ligase domain D1107_00095 PF08245 Mur ligase middle domain D1107_00095 PF01225 Mur ligase family, catalytic domain D1107_00100 PF01820 D-ala D-ala ligase N-terminus D1107_00100 PF07478 D-ala D-ala ligase C-terminus D1107_00105 PF03799 Cell division protein FtsQ D1107_00105 PF08478 POTRA domain, FtsQ-type D1107_00110 PF02491 SHS2 domain inserted in FTSA D1107_00115 PF12327 FtsZ family, C-terminal domain D1107_00115 PF00091 Tubulin/FtsZ family, GTPase domain D1107_00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1107_00125 PF02463 RecF/RecN/SMC N terminal domain D1107_00130 PF00005 ABC transporter D1107_00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1107_00135 PF00528 Binding-protein-dependent transport system inner membrane component D1107_00135 PF12911 N-terminal TM domain of oligopeptide transport permease C D1107_00140 PF00528 Binding-protein-dependent transport system inner membrane component D1107_00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1107_00150 PF16658 Class II release factor RF3, C-terminal domain D1107_00150 PF00009 Elongation factor Tu GTP binding domain D1107_00150 PF03144 Elongation factor Tu domain 2 D1107_00165 PF01195 Peptidyl-tRNA hydrolase D1107_00170 PF01926 50S ribosome-binding GTPase D1107_00170 PF06071 Protein of unknown function (DUF933) D1107_00185 PF05433 Glycine zipper 2TM domain D1107_00190 PF06185 YecM protein D1107_00195 PF05746 DALR anticodon binding domain D1107_00195 PF03485 Arginyl tRNA synthetase N terminal domain D1107_00195 PF00750 tRNA synthetases class I (R) D1107_00200 PF01018 GTP1/OBG D1107_00200 PF01926 50S ribosome-binding GTPase D1107_00205 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) D1107_00210 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1107_00210 PF00588 SpoU rRNA Methylase family D1107_00215 PF13091 PLD-like domain D1107_00220 PF08264 Anticodon-binding domain of tRNA D1107_00220 PF06827 Zinc finger found in FPG and IleRS D1107_00220 PF00133 tRNA synthetases class I (I, L, M and V) D1107_00225 PF01687 Riboflavin kinase D1107_00225 PF06574 FAD synthetase D1107_00230 PF13521 AAA domain D1107_00230 PF01467 Cytidylyltransferase-like D1107_00235 PF00149 Calcineurin-like phosphoesterase D1107_00240 PF00072 Response regulator receiver domain D1107_00240 PF00486 Transcriptional regulatory protein, C terminal D1107_00255 PF01168 Alanine racemase, N-terminal domain D1107_00260 PF00679 Elongation factor G C-terminus D1107_00260 PF00009 Elongation factor Tu GTP binding domain D1107_00260 PF03144 Elongation factor Tu domain 2 D1107_00265 PF00462 Glutaredoxin D1107_00270 PF03725 3' exoribonuclease family, domain 2 D1107_00270 PF01138 3' exoribonuclease family, domain 1 D1107_00275 PF08340 Domain of unknown function (DUF1732) D1107_00275 PF03755 YicC-like family, N-terminal region D1107_00280 PF01571 Aminomethyltransferase folate-binding domain D1107_00285 PF00037 4Fe-4S binding domain D1107_00290 PF00072 Response regulator receiver domain D1107_00290 PF00196 Bacterial regulatory proteins, luxR family D1107_00295 PF10672 S-adenosylmethionine-dependent methyltransferase D1107_00295 PF02926 THUMP domain D1107_00295 PF01170 Putative RNA methylase family UPF0020 D1107_00300 PF00588 SpoU rRNA Methylase family D1107_00305 PF00923 Transaldolase/Fructose-6-phosphate aldolase D1107_00335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1107_00340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1107_00345 PF00528 Binding-protein-dependent transport system inner membrane component D1107_00350 PF12911 N-terminal TM domain of oligopeptide transport permease C D1107_00350 PF00528 Binding-protein-dependent transport system inner membrane component D1107_00355 PF00005 ABC transporter D1107_00355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1107_00360 PF00005 ABC transporter D1107_00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1107_00365 PF06146 Phosphate-starvation-inducible E D1107_00375 PF01042 Endoribonuclease L-PSP D1107_00380 PF01063 Amino-transferase class IV D1107_00385 PF00462 Glutaredoxin D1107_00390 PF13662 Toprim domain D1107_00390 PF02132 RecR protein D1107_00395 PF02575 YbaB/EbfC DNA-binding family D1107_00400 PF03544 Gram-negative bacterial TonB protein C-terminal D1107_00405 PF02472 Biopolymer transport protein ExbD/TolR D1107_00410 PF01618 MotA/TolQ/ExbB proton channel family D1107_00415 PF00581 Rhodanese-like domain D1107_00425 PF03610 PTS system fructose IIA component D1107_00425 PF05524 PEP-utilising enzyme, N-terminal D1107_00425 PF00391 PEP-utilising enzyme, mobile domain D1107_00425 PF00381 PTS HPr component phosphorylation site D1107_00430 PF02734 DAK2 domain D1107_00435 PF02733 Dak1 domain D1107_00440 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1107_00445 PF02348 Cytidylyltransferase D1107_00450 PF06078 Bacterial protein of unknown function (DUF937) D1107_00455 PF09297 NADH pyrophosphatase zinc ribbon domain D1107_00455 PF00293 NUDIX domain D1107_00460 PF00849 RNA pseudouridylate synthase D1107_00470 PF04186 FxsA cytoplasmic membrane protein D1107_00475 PF00557 Metallopeptidase family M24 D1107_00480 PF01206 Sulfurtransferase TusA D1107_00485 PF06877 Regulator of ribonuclease activity B D1107_00490 PF01926 50S ribosome-binding GTPase D1107_00500 PF02535 ZIP Zinc transporter D1107_00505 PF00920 Dehydratase family D1107_00515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1107_00515 PF00205 Thiamine pyrophosphate enzyme, central domain D1107_00515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1107_00520 PF02335 Cytochrome c552 D1107_00530 PF13247 4Fe-4S dicluster domain D1107_00535 PF03916 Polysulphide reductase, NrfD D1107_00570 PF13018 Extended Signal Peptide of Type V secretion system D1107_00570 PF05662 Coiled stalk of trimeric autotransporter adhesin D1107_00570 PF05662 Coiled stalk of trimeric autotransporter adhesin D1107_00570 PF05658 Head domain of trimeric autotransporter adhesin D1107_00570 PF05658 Head domain of trimeric autotransporter adhesin D1107_00570 PF03895 YadA-like membrane anchor domain D1107_00570 PF13018 Extended Signal Peptide of Type V secretion system D1107_00570 PF05662 Coiled stalk of trimeric autotransporter adhesin D1107_00570 PF05658 Head domain of trimeric autotransporter adhesin D1107_00570 PF03895 YadA-like membrane anchor domain D1107_00570 PF03895 YadA-like membrane anchor domain D1107_00570 PF13018 Extended Signal Peptide of Type V secretion system D1107_00575 PF00860 Permease family D1107_00580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D1107_00580 PF14850 DNA-binding domain of Proline dehydrogenase D1107_00580 PF01619 Proline dehydrogenase D1107_00580 PF00171 Aldehyde dehydrogenase family D1107_00585 PF00474 Sodium:solute symporter family D1107_00590 PF09339 IclR helix-turn-helix domain D1107_00590 PF01614 Bacterial transcriptional regulator D1107_00595 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1107_00605 PF05164 Cell division protein ZapA D1107_00610 PF03695 Uncharacterised protein family (UPF0149) D1107_00615 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1107_00620 PF04222 Protein of unknown function (DUF416) D1107_00625 PF00216 Bacterial DNA-binding protein D1107_00630 PF00303 Thymidylate synthase D1107_00640 PF06968 Biotin and Thiamin Synthesis associated domain D1107_00640 PF04055 Radical SAM superfamily D1107_00645 PF00313 'Cold-shock' DNA-binding domain D1107_00650 PF04352 ProQ/FINO family D1107_00655 PF03572 Peptidase family S41 D1107_00655 PF17804 Tail specific protease N-terminal domain D1107_00655 PF11818 C-terminal domain of tail specific protease (DUF3340) D1107_00655 PF00595 PDZ domain D1107_00660 PF03734 L,D-transpeptidase catalytic domain D1107_00665 PF05951 Bacterial protein of unknown function (DUF882) D1107_00670 PF00753 Metallo-beta-lactamase superfamily D1107_00685 PF01230 HIT domain D1107_00690 PF00950 ABC 3 transport family D1107_00695 PF00950 ABC 3 transport family D1107_00700 PF01351 Ribonuclease HII D1107_00705 PF03193 RsgA GTPase D1107_00710 PF03466 LysR substrate binding domain D1107_00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_00715 PF13419 Haloacid dehalogenase-like hydrolase D1107_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_00720 PF03466 LysR substrate binding domain D1107_00730 PF00710 Asparaginase, N-terminal D1107_00730 PF17763 Glutaminase/Asparaginase C-terminal domain D1107_00735 PF06418 CTP synthase N-terminus D1107_00735 PF00117 Glutamine amidotransferase class-I D1107_00740 PF10063 Uncharacterized integral membrane protein (DUF2301) D1107_00745 PF00694 Aconitase C-terminal domain D1107_00750 PF00330 Aconitase family (aconitate hydratase) D1107_00755 PF05651 Putative sugar diacid recognition D1107_00755 PF17853 GGDEF-like domain D1107_00755 PF13556 PucR C-terminal helix-turn-helix domain D1107_00760 PF02447 GntP family permease D1107_00765 PF02595 Glycerate kinase family D1107_00770 PF00708 Acylphosphatase D1107_00775 PF11398 Protein of unknown function (DUF2813) D1107_00780 PF03641 Possible lysine decarboxylase D1107_00780 PF11892 Domain of unknown function (DUF3412) D1107_00780 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1107_00785 PF01207 Dihydrouridine synthase (Dus) D1107_00795 PF03477 ATP cone domain D1107_00795 PF02867 Ribonucleotide reductase, barrel domain D1107_00795 PF00317 Ribonucleotide reductase, all-alpha domain D1107_00800 PF01521 Iron-sulphur cluster biosynthesis D1107_00800 PF01106 NifU-like domain D1107_00805 PF11973 NQRA C-terminal domain D1107_00805 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D1107_00810 PF03116 NQR2, RnfD, RnfE family D1107_00815 PF04205 FMN-binding domain D1107_00820 PF02508 Rnf-Nqr subunit, membrane protein D1107_00825 PF02508 Rnf-Nqr subunit, membrane protein D1107_00830 PF00111 2Fe-2S iron-sulfur cluster binding domain D1107_00830 PF00175 Oxidoreductase NAD-binding domain D1107_00830 PF00970 Oxidoreductase FAD-binding domain D1107_00835 PF02424 ApbE family D1107_00840 PF04400 (Na+)-NQR maturation NqrM D1107_00850 PF12832 MFS_1 like family D1107_00855 PF03807 NADP oxidoreductase coenzyme F420-dependent D1107_00855 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1107_00860 PF04381 Putative exonuclease, RdgC D1107_00865 PF13419 Haloacid dehalogenase-like hydrolase D1107_00880 PF02508 Rnf-Nqr subunit, membrane protein D1107_00885 PF04060 Putative Fe-S cluster D1107_00890 PF13375 RnfC Barrel sandwich hybrid domain D1107_00890 PF12838 4Fe-4S dicluster domain D1107_00890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1107_00895 PF03458 UPF0126 domain D1107_00900 PF03116 NQR2, RnfD, RnfE family D1107_00905 PF04205 FMN-binding domain D1107_00910 PF02508 Rnf-Nqr subunit, membrane protein D1107_00915 PF03279 Bacterial lipid A biosynthesis acyltransferase D1107_00930 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1107_00935 PF12626 Polymerase A arginine-rich C-terminus D1107_00935 PF12627 Probable RNA and SrmB- binding site of polymerase A D1107_00935 PF01743 Poly A polymerase head domain D1107_00940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1107_00950 PF11739 Dicarboxylate transport D1107_00960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1107_00965 PF00929 Exonuclease D1107_00975 PF01817 Chorismate mutase type II D1107_00975 PF02153 Prephenate dehydrogenase D1107_00980 PF00793 DAHP synthetase I family D1107_00985 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1107_00990 PF02887 Pyruvate kinase, alpha/beta domain D1107_00990 PF00224 Pyruvate kinase, barrel domain D1107_00995 PF00300 Histidine phosphatase superfamily (branch 1) D1107_01000 PF01207 Dihydrouridine synthase (Dus) D1107_01005 PF02954 Bacterial regulatory protein, Fis family D1107_01010 PF00209 Sodium:neurotransmitter symporter family D1107_01015 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1107_01020 PF01761 3-dehydroquinate synthase D1107_01025 PF01202 Shikimate kinase D1107_01030 PF00905 Penicillin binding protein transpeptidase domain D1107_01030 PF00912 Transglycosylase D1107_01030 PF17092 Penicillin-binding protein OB-like domain D1107_01035 PF11104 Type IV pilus assembly protein PilM; D1107_01055 PF00263 Bacterial type II and III secretion system protein D1107_01055 PF03958 Bacterial type II/III secretion system short domain D1107_01060 PF01029 NusB family D1107_01065 PF00586 AIR synthase related protein, N-terminal domain D1107_01065 PF02769 AIR synthase related protein, C-terminal domain D1107_01070 PF04608 Phosphatidylglycerophosphatase A D1107_01075 PF01810 LysE type translocator D1107_01080 PF00588 SpoU rRNA Methylase family D1107_01080 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1107_01085 PF00459 Inositol monophosphatase family D1107_01090 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1107_01090 PF02779 Transketolase, pyrimidine binding domain D1107_01090 PF02780 Transketolase, C-terminal domain D1107_01100 PF00464 Serine hydroxymethyltransferase D1107_01105 PF01513 ATP-NAD kinase D1107_01110 PF18019 HD domain D1107_01115 PF01867 CRISPR associated protein Cas1 D1107_01125 PF09615 CRISPR-associated protein (Cas_Csy3) D1107_01130 PF09614 CRISPR-associated protein (Cas_Csy2) D1107_01140 PF03129 Anticodon binding domain D1107_01140 PF02824 TGS domain D1107_01140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1107_01140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1107_01145 PF03783 Curli production assembly/transport component CsgG D1107_01155 PF05643 Putative bacterial lipoprotein (DUF799) D1107_01160 PF05198 Translation initiation factor IF-3, N-terminal domain D1107_01160 PF00707 Translation initiation factor IF-3, C-terminal domain D1107_01165 PF01632 Ribosomal protein L35 D1107_01170 PF00453 Ribosomal protein L20 D1107_01190 PF00571 CBS domain D1107_01190 PF03471 Transporter associated domain D1107_01190 PF01595 Cyclin M transmembrane N-terminal domain D1107_01195 PF00849 RNA pseudouridylate synthase D1107_01200 PF00300 Histidine phosphatase superfamily (branch 1) D1107_01205 PF03652 Holliday junction resolvase D1107_01210 PF02622 Uncharacterized ACR, COG1678 D1107_01215 PF04452 RNA methyltransferase D1107_01225 PF01722 BolA-like protein D1107_01250 PF02810 SEC-C motif D1107_01250 PF07517 SecA DEAD-like domain D1107_01250 PF01043 SecA preprotein cross-linking domain D1107_01250 PF07516 SecA Wing and Scaffold domain D1107_01260 PF00293 NUDIX domain D1107_01265 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1107_01270 PF00696 Amino acid kinase family D1107_01275 PF00202 Aminotransferase class-III D1107_01280 PF17483 C-lobe handle domain of Tf-binding protein B D1107_01280 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1107_01280 PF17484 N-Lobe handle Tf-binding protein B D1107_01285 PF07715 TonB-dependent Receptor Plug Domain D1107_01285 PF00593 TonB dependent receptor D1107_01290 PF07497 Rho termination factor, RNA-binding domain D1107_01290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1107_01290 PF07498 Rho termination factor, N-terminal domain D1107_01295 PF00291 Pyridoxal-phosphate dependent enzyme D1107_01300 PF00288 GHMP kinases N terminal domain D1107_01300 PF08544 GHMP kinases C terminal D1107_01305 PF00696 Amino acid kinase family D1107_01305 PF13840 ACT domain D1107_01305 PF03447 Homoserine dehydrogenase, NAD binding domain D1107_01305 PF01842 ACT domain D1107_01305 PF00742 Homoserine dehydrogenase D1107_01310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1107_01310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1107_01315 PF00842 Alanine racemase, C-terminal domain D1107_01315 PF01168 Alanine racemase, N-terminal domain D1107_01320 PF13538 UvrD-like helicase C-terminal domain D1107_01355 PF07687 Peptidase dimerisation domain D1107_01355 PF01546 Peptidase family M20/M25/M40 D1107_01360 PF00156 Phosphoribosyl transferase domain D1107_01365 PF00625 Guanylate kinase D1107_01370 PF02321 Outer membrane efflux protein D1107_01375 PF03658 RnfH family Ubiquitin D1107_01380 PF03364 Polyketide cyclase / dehydrase and lipid transport D1107_01385 PF03459 TOBE domain D1107_01385 PF00005 ABC transporter D1107_01390 PF00528 Binding-protein-dependent transport system inner membrane component D1107_01400 PF01061 ABC-2 type transporter D1107_01405 PF00005 ABC transporter D1107_01410 PF12170 DNA polymerase III tau subunit V interacting with alpha D1107_01410 PF12169 DNA polymerase III subunits gamma and tau domain III D1107_01415 PF00156 Phosphoribosyl transferase domain D1107_01425 PF01042 Endoribonuclease L-PSP D1107_01430 PF00291 Pyridoxal-phosphate dependent enzyme D1107_01435 PF04073 Aminoacyl-tRNA editing domain D1107_01440 PF00005 ABC transporter D1107_01445 PF01297 Zinc-uptake complex component A periplasmic D1107_01450 PF04358 DsrC like protein D1107_01455 PF01027 Inhibitor of apoptosis-promoting Bax1 D1107_01460 PF01066 CDP-alcohol phosphatidyltransferase D1107_01470 PF01541 GIY-YIG catalytic domain D1107_01470 PF02151 UvrB/uvrC motif D1107_01470 PF08459 UvrC Helix-hairpin-helix N-terminal D1107_01475 PF01026 TatD related DNase D1107_01480 PF13361 UvrD-like helicase C-terminal domain D1107_01480 PF00580 UvrD/REP helicase N-terminal domain D1107_01485 PF00005 ABC transporter D1107_01485 PF08402 TOBE domain D1107_01490 PF00528 Binding-protein-dependent transport system inner membrane component D1107_01495 PF00528 Binding-protein-dependent transport system inner membrane component D1107_01500 PF01330 RuvA N terminal domain D1107_01500 PF07499 RuvA, C-terminal domain D1107_01505 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1107_01505 PF05491 RuvB C-terminal winged helix domain D1107_01505 PF17864 RuvB AAA lid domain D1107_01515 PF03989 DNA gyrase C-terminal domain, beta-propeller D1107_01515 PF00521 DNA gyrase/topoisomerase IV, subunit A D1107_01525 PF00005 ABC transporter D1107_01525 PF16326 ABC transporter C-terminal domain D1107_01525 PF12848 ABC transporter D1107_01530 PF00899 ThiF family D1107_01535 PF17274 Family of unknown function (DUF5339) D1107_01540 PF01654 Cytochrome bd terminal oxidase subunit I D1107_01545 PF02322 Cytochrome bd terminal oxidase subunit II D1107_01560 PF03061 Thioesterase superfamily D1107_01565 PF01618 MotA/TolQ/ExbB proton channel family D1107_01570 PF02472 Biopolymer transport protein ExbD/TolR D1107_01575 PF06519 TolA C-terminal D1107_01580 PF07676 WD40-like Beta Propeller Repeat D1107_01580 PF04052 TolB amino-terminal domain D1107_01585 PF00691 OmpA family D1107_01595 PF00226 DnaJ domain D1107_01595 PF05099 Tellurite resistance protein TerB D1107_01600 PF01207 Dihydrouridine synthase (Dus) D1107_01605 PF05128 Domain of unknown function (DUF697) D1107_01610 PF12848 ABC transporter D1107_01610 PF00005 ABC transporter D1107_01620 PF03453 MoeA N-terminal region (domain I and II) D1107_01620 PF03454 MoeA C-terminal region (domain IV) D1107_01620 PF00994 Probable molybdopterin binding domain D1107_01625 PF00899 ThiF family D1107_01635 PF01938 TRAM domain D1107_01635 PF05958 tRNA (Uracil-5-)-methyltransferase D1107_01640 PF01966 HD domain D1107_01640 PF13286 Phosphohydrolase-associated domain D1107_01645 PF00176 SNF2 family N-terminal domain D1107_01645 PF18339 RapA N-terminal Tudor like domain 1 D1107_01645 PF18337 RapA N-terminal Tudor like domain D1107_01645 PF00271 Helicase conserved C-terminal domain D1107_01645 PF12137 RNA polymerase recycling family C-terminal D1107_01650 PF00849 RNA pseudouridylate synthase D1107_01655 PF01510 N-acetylmuramoyl-L-alanine amidase D1107_01660 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1107_01665 PF00156 Phosphoribosyl transferase domain D1107_01670 PF01717 Cobalamin-independent synthase, Catalytic domain D1107_01675 PF01053 Cys/Met metabolism PLP-dependent enzyme D1107_01680 PF02600 Disulfide bond formation protein DsbB D1107_01685 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D1107_01690 PF07840 FadR C-terminal domain D1107_01690 PF00392 Bacterial regulatory proteins, gntR family D1107_01695 PF02562 PhoH-like protein D1107_01715 PF00293 NUDIX domain D1107_01720 PF01494 FAD binding domain D1107_01740 PF01494 FAD binding domain D1107_01745 PF03668 P-loop ATPase protein family D1107_01750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1107_01755 PF00005 ABC transporter D1107_01755 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1107_01760 PF03968 OstA-like protein D1107_01770 PF00311 Phosphoenolpyruvate carboxylase D1107_01775 PF04536 TPM domain D1107_01785 PF04011 LemA family D1107_01790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1107_01795 PF00294 pfkB family carbohydrate kinase D1107_01800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1107_01800 PF00381 PTS HPr component phosphorylation site D1107_01805 PF00128 Alpha amylase, catalytic domain D1107_01805 PF02806 Alpha amylase, C-terminal all-beta domain D1107_01805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1107_01810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1107_01810 PF18390 Glycogen debranching enzyme C-terminal domain D1107_01810 PF00128 Alpha amylase, catalytic domain D1107_01815 PF00483 Nucleotidyl transferase D1107_01820 PF00534 Glycosyl transferases group 1 D1107_01820 PF08323 Starch synthase catalytic domain D1107_01825 PF00343 Carbohydrate phosphorylase D1107_01830 PF00334 Nucleoside diphosphate kinase D1107_01835 PF09334 tRNA synthetases class I (M) D1107_01835 PF08264 Anticodon-binding domain of tRNA D1107_01835 PF01588 Putative tRNA binding domain D1107_01840 PF13378 Enolase C-terminal domain-like D1107_01850 PF01479 S4 domain D1107_01850 PF00849 RNA pseudouridylate synthase D1107_01855 PF07690 Major Facilitator Superfamily D1107_01870 PF01261 Xylose isomerase-like TIM barrel D1107_01875 PF00877 NlpC/P60 family D1107_01880 PF00717 Peptidase S24-like D1107_01885 PF01228 Glycine radical D1107_01890 PF03167 Uracil DNA glycosylase superfamily D1107_01895 PF04393 Protein of unknown function (DUF535) D1107_01900 PF03797 Autotransporter beta-domain D1107_01900 PF00082 Subtilase family D1107_01905 PF04408 Helicase associated domain (HA2) D1107_01905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1107_01905 PF00270 DEAD/DEAH box helicase D1107_01905 PF11898 Domain of unknown function (DUF3418) D1107_01905 PF00271 Helicase conserved C-terminal domain D1107_01910 PF04284 Protein of unknown function (DUF441) D1107_01915 PF01025 GrpE D1107_01920 PF13416 Bacterial extracellular solute-binding protein D1107_01925 PF01554 MatE D1107_01930 PF12705 PD-(D/E)XK nuclease superfamily D1107_01930 PF13361 UvrD-like helicase C-terminal domain D1107_01930 PF00580 UvrD/REP helicase N-terminal domain D1107_01935 PF00795 Carbon-nitrogen hydrolase D1107_01940 PF03471 Transporter associated domain D1107_01940 PF00571 CBS domain D1107_01945 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1107_01950 PF00230 Major intrinsic protein D1107_01955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1107_01955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1107_01960 PF00004 ATPase family associated with various cellular activities (AAA) D1107_01960 PF05362 Lon protease (S16) C-terminal proteolytic domain D1107_01960 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1107_01965 PF07690 Major Facilitator Superfamily D1107_01970 PF03009 Glycerophosphoryl diester phosphodiesterase family D1107_01975 PF04324 BFD-like [2Fe-2S] binding domain D1107_01975 PF01266 FAD dependent oxidoreductase D1107_01980 PF00890 FAD binding domain D1107_01985 PF13183 4Fe-4S dicluster domain D1107_01985 PF02754 Cysteine-rich domain D1107_01990 PF01872 RibD C-terminal domain D1107_01990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1107_01995 PF00677 Lumazine binding domain D1107_02000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1107_02000 PF00925 GTP cyclohydrolase II D1107_02005 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1107_02010 PF03449 Transcription elongation factor, N-terminal D1107_02010 PF01272 Transcription elongation factor, GreA/GreB, C-term D1107_02015 PF01380 SIS domain D1107_02015 PF00571 CBS domain D1107_02020 PF00883 Cytosol aminopeptidase family, catalytic domain D1107_02020 PF12404 Peptidase D1107_02025 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D1107_02030 PF01758 Sodium Bile acid symporter family D1107_02035 PF13533 Biotin-lipoyl like D1107_02045 PF00682 HMGL-like D1107_02045 PF08502 LeuA allosteric (dimerisation) domain D1107_02050 PF08281 Sigma-70, region 4 D1107_02050 PF04542 Sigma-70 region 2 D1107_02055 PF03872 Anti sigma-E protein RseA, N-terminal domain D1107_02055 PF03873 Anti sigma-E protein RseA, C-terminal domain D1107_02065 PF00501 AMP-binding enzyme D1107_02065 PF13193 AMP-binding enzyme C-terminal domain D1107_02075 PF00398 Ribosomal RNA adenine dimethylase D1107_02080 PF00639 PPIC-type PPIASE domain D1107_02080 PF09312 SurA N-terminal domain D1107_02085 PF00156 Phosphoribosyl transferase domain D1107_02090 PF01467 Cytidylyltransferase-like D1107_02090 PF00294 pfkB family carbohydrate kinase D1107_02095 PF01926 50S ribosome-binding GTPase D1107_02095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1107_02100 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1107_02100 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1107_02100 PF01488 Shikimate / quinate 5-dehydrogenase D1107_02105 PF02824 TGS domain D1107_02105 PF04607 Region found in RelA / SpoT proteins D1107_02105 PF13291 ACT domain D1107_02110 PF13288 DXP reductoisomerase C-terminal domain D1107_02110 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1107_02110 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1107_02115 PF00132 Bacterial transferase hexapeptide (six repeats) D1107_02115 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1107_02120 PF07977 FabA-like domain D1107_02125 PF00132 Bacterial transferase hexapeptide (six repeats) D1107_02125 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1107_02135 PF01103 Surface antigen D1107_02135 PF07244 Surface antigen variable number repeat D1107_02140 PF02163 Peptidase family M50 D1107_02150 PF01255 Putative undecaprenyl diphosphate synthase D1107_02155 PF00753 Metallo-beta-lactamase superfamily D1107_02155 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1107_02160 PF00480 ROK family D1107_02165 PF01569 PAP2 superfamily D1107_02170 PF01985 CRS1 / YhbY (CRM) domain D1107_02175 PF00535 Glycosyl transferase family 2 D1107_02180 PF00768 D-alanyl-D-alanine carboxypeptidase D1107_02185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1107_02190 PF00764 Arginosuccinate synthase D1107_02195 PF00075 RNase H D1107_02200 PF02674 Colicin V production protein D1107_02205 PF00156 Phosphoribosyl transferase domain D1107_02215 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D1107_02215 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D1107_02220 PF04355 SmpA / OmlA family D1107_02225 PF04245 37-kD nucleoid-associated bacterial protein D1107_02230 PF01042 Endoribonuclease L-PSP D1107_02235 PF02578 Multi-copper polyphenol oxidoreductase laccase D1107_02245 PF07119 Protein of unknown function (DUF1375) D1107_02250 PF00180 Isocitrate/isopropylmalate dehydrogenase D1107_02255 PF01641 SelR domain D1107_02260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1107_02260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1107_02270 PF04085 rod shape-determining protein MreC D1107_02275 PF04093 rod shape-determining protein MreD D1107_02280 PF00004 ATPase family associated with various cellular activities (AAA) D1107_02280 PF16193 AAA C-terminal domain D1107_02280 PF12002 MgsA AAA+ ATPase C terminal D1107_02285 PF00950 ABC 3 transport family D1107_02290 PF13230 Glutamine amidotransferases class-II D1107_02295 PF00561 alpha/beta hydrolase fold D1107_02300 PF02698 DUF218 domain D1107_02310 PF03895 YadA-like membrane anchor domain D1107_02310 PF05662 Coiled stalk of trimeric autotransporter adhesin D1107_02310 PF13018 Extended Signal Peptide of Type V secretion system D1107_02310 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin D1107_02315 PF02589 LUD domain D1107_02320 PF11870 Domain of unknown function (DUF3390) D1107_02320 PF02589 LUD domain D1107_02320 PF13183 4Fe-4S dicluster domain D1107_02325 PF02754 Cysteine-rich domain D1107_02330 PF02652 L-lactate permease D1107_02335 PF00816 H-NS histone family D1107_02340 PF03553 Na+/H+ antiporter family D1107_02345 PF13407 Periplasmic binding protein domain D1107_02350 PF02629 CoA binding domain D1107_02350 PF00549 CoA-ligase D1107_02355 PF00549 CoA-ligase D1107_02355 PF08442 ATP-grasp domain D1107_02360 PF04393 Protein of unknown function (DUF535) D1107_02365 PF02817 e3 binding domain D1107_02365 PF00364 Biotin-requiring enzyme D1107_02365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1107_02370 PF00676 Dehydrogenase E1 component D1107_02370 PF16078 2-oxoglutarate dehydrogenase N-terminus D1107_02370 PF02779 Transketolase, pyrimidine binding domain D1107_02370 PF16870 2-oxoglutarate dehydrogenase C-terminal D1107_02375 PF00005 ABC transporter D1107_02380 PF04225 Opacity-associated protein A LysM-like domain D1107_02380 PF01551 Peptidase family M23 D1107_02385 PF13098 Thioredoxin-like domain D1107_02385 PF10411 Disulfide bond isomerase protein N-terminus D1107_02390 PF17768 RecJ OB domain D1107_02390 PF02272 DHHA1 domain D1107_02390 PF01368 DHH family D1107_02395 PF01389 OmpA-like transmembrane domain D1107_02395 PF00691 OmpA family D1107_02405 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1107_02405 PF07730 Histidine kinase D1107_02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1107_02405 PF00672 HAMP domain D1107_02415 PF01725 Ham1 family D1107_02420 PF01906 Putative heavy-metal-binding D1107_02425 PF01268 Formate--tetrahydrofolate ligase D1107_02430 PF03692 Putative zinc- or iron-chelating domain D1107_02435 PF00106 short chain dehydrogenase D1107_02440 PF00291 Pyridoxal-phosphate dependent enzyme D1107_02445 PF00290 Tryptophan synthase alpha chain D1107_02450 PF12441 CopG antitoxin of type II toxin-antitoxin system D1107_02460 PF01367 5'-3' exonuclease, C-terminal SAM fold D1107_02460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1107_02460 PF00476 DNA polymerase family A D1107_02460 PF01612 3'-5' exonuclease D1107_02470 PF03548 Outer membrane lipoprotein carrier protein LolA D1107_02475 PF01371 Trp repressor protein D1107_02480 PF00912 Transglycosylase D1107_02485 PF02627 Carboxymuconolactone decarboxylase family D1107_02515 PF00881 Nitroreductase family D1107_02520 PF08443 RimK-like ATP-grasp domain D1107_02520 PF18030 RimK PreATP-grasp domain D1107_02525 PF02698 DUF218 domain D1107_02530 PF03949 Malic enzyme, NAD binding domain D1107_02530 PF01515 Phosphate acetyl/butaryl transferase D1107_02530 PF00390 Malic enzyme, N-terminal domain D1107_02535 PF01386 Ribosomal L25p family D1107_02545 PF06226 Protein of unknown function (DUF1007) D1107_02550 PF03824 High-affinity nickel-transport protein D1107_02555 PF01235 Sodium:alanine symporter family D1107_02565 PF00005 ABC transporter D1107_02570 PF00899 ThiF family D1107_02575 PF02597 ThiS family D1107_02580 PF05690 Thiazole biosynthesis protein ThiG D1107_02585 PF04055 Radical SAM superfamily D1107_02585 PF06968 Biotin and Thiamin Synthesis associated domain D1107_02590 PF03070 TENA/THI-4/PQQC family D1107_02600 PF08543 Phosphomethylpyrimidine kinase D1107_02605 PF02581 Thiamine monophosphate synthase D1107_02610 PF06421 GTP-binding protein LepA C-terminus D1107_02610 PF03144 Elongation factor Tu domain 2 D1107_02610 PF00009 Elongation factor Tu GTP binding domain D1107_02610 PF00679 Elongation factor G C-terminus D1107_02615 PF10502 Signal peptidase, peptidase S26 D1107_02620 PF14622 Ribonuclease-III-like D1107_02620 PF00035 Double-stranded RNA binding motif D1107_02625 PF01926 50S ribosome-binding GTPase D1107_02625 PF07650 KH domain D1107_02630 PF11967 Recombination protein O N terminal D1107_02630 PF02565 Recombination protein O C terminal D1107_02665 PF00437 Type II/IV secretion system protein D1107_02680 PF03958 Bacterial type II/III secretion system short domain D1107_02680 PF00263 Bacterial type II and III secretion system protein D1107_02705 PF00271 Helicase conserved C-terminal domain D1107_02705 PF00270 DEAD/DEAH box helicase D1107_02715 PF05872 Bacterial protein of unknown function (DUF853) D1107_02725 PF00528 Binding-protein-dependent transport system inner membrane component D1107_02735 PF00318 Ribosomal protein S2 D1107_02740 PF00889 Elongation factor TS D1107_02745 PF00884 Sulfatase D1107_02750 PF00696 Amino acid kinase family D1107_02755 PF01765 Ribosome recycling factor D1107_02760 PF00392 Bacterial regulatory proteins, gntR family D1107_02760 PF00155 Aminotransferase class I and II D1107_02765 PF01680 SOR/SNZ family D1107_02770 PF01174 SNO glutamine amidotransferase family D1107_02775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1107_02780 PF00271 Helicase conserved C-terminal domain D1107_02780 PF00270 DEAD/DEAH box helicase D1107_02780 PF03880 DbpA RNA binding domain D1107_02790 PF00013 KH domain D1107_02790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1107_02790 PF00575 S1 RNA binding domain D1107_02790 PF03725 3' exoribonuclease family, domain 2 D1107_02790 PF01138 3' exoribonuclease family, domain 1 D1107_02795 PF03989 DNA gyrase C-terminal domain, beta-propeller D1107_02795 PF00521 DNA gyrase/topoisomerase IV, subunit A D1107_02805 PF03882 MukF winged-helix domain D1107_02805 PF17192 MukF middle domain D1107_02805 PF17193 MukF C-terminal domain D1107_02810 PF04288 MukE-like family D1107_02815 PF16330 MukB hinge domain D1107_02815 PF04310 MukB N-terminal D1107_02820 PF07690 Major Facilitator Superfamily D1107_02825 PF00884 Sulfatase D1107_02825 PF11893 Domain of unknown function (DUF3413) D1107_02830 PF07208 Protein of unknown function (DUF1414) D1107_02835 PF00440 Bacterial regulatory proteins, tetR family D1107_02840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1107_02845 PF00873 AcrB/AcrD/AcrF family D1107_02850 PF12804 MobA-like NTP transferase domain D1107_02850 PF00132 Bacterial transferase hexapeptide (six repeats) D1107_02860 PF08942 Domain of unknown function (DUF1919) D1107_02865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1107_02865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1107_02865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1107_02865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1107_02870 PF02540 NAD synthase D1107_02870 PF00117 Glutamine amidotransferase class-I D1107_02870 PF00958 GMP synthase C terminal domain D1107_02880 PF00571 CBS domain D1107_02880 PF00478 IMP dehydrogenase / GMP reductase domain D1107_02885 PF01728 FtsJ-like methyltransferase D1107_02890 PF01434 Peptidase family M41 D1107_02890 PF06480 FtsH Extracellular D1107_02890 PF17862 AAA+ lid domain D1107_02890 PF00004 ATPase family associated with various cellular activities (AAA) D1107_02895 PF03222 Tryptophan/tyrosine permease family D1107_02900 PF03222 Tryptophan/tyrosine permease family D1107_02905 PF08335 GlnD PII-uridylyltransferase D1107_02905 PF01966 HD domain D1107_02910 PF06295 Protein of unknown function (DUF1043) D1107_02915 PF00572 Ribosomal protein L13 D1107_02920 PF00380 Ribosomal protein S9/S16 D1107_02925 PF03883 Peroxide stress protein YaaA D1107_02935 PF16916 Dimerisation domain of Zinc Transporter D1107_02935 PF01545 Cation efflux family D1107_02940 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D1107_02945 PF00375 Sodium:dicarboxylate symporter family D1107_02950 PF00881 Nitroreductase family D1107_02955 PF01409 tRNA synthetases class II core domain (F) D1107_02955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1107_02960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1107_02960 PF01588 Putative tRNA binding domain D1107_02960 PF03147 Ferredoxin-fold anticodon binding domain D1107_02960 PF03484 tRNA synthetase B5 domain D1107_02960 PF03483 B3/4 domain D1107_02965 PF00216 Bacterial DNA-binding protein D1107_02970 PF00877 NlpC/P60 family D1107_02985 PF00480 ROK family D1107_02985 PF01047 MarR family D1107_02990 PF00570 HRDC domain D1107_02990 PF01612 3'-5' exonuclease D1107_02995 PF01037 Lrp/AsnC ligand binding domain D1107_03000 PF01580 FtsK/SpoIIIE family D1107_03000 PF09397 Ftsk gamma domain D1107_03000 PF17854 FtsK alpha domain D1107_03000 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1107_03005 PF04228 Putative neutral zinc metallopeptidase D1107_03010 PF00793 DAHP synthetase I family D1107_03015 PF00814 Glycoprotease family D1107_03020 PF00265 Thymidine kinase D1107_03025 PF06005 Cell division protein ZapB D1107_03030 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1107_03035 PF01784 NIF3 (NGG1p interacting factor 3) D1107_03040 PF00005 ABC transporter D1107_03040 PF02687 FtsX-like permease family D1107_03040 PF12704 MacB-like periplasmic core domain D1107_03045 PF00672 HAMP domain D1107_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1107_03045 PF00512 His Kinase A (phospho-acceptor) domain D1107_03045 PF16527 Two-component sensor protein CpxA, periplasmic domain D1107_03050 PF00072 Response regulator receiver domain D1107_03050 PF00486 Transcriptional regulatory protein, C terminal D1107_03055 PF03819 MazG nucleotide pyrophosphohydrolase domain D1107_03060 PF17848 Acetyl-coA carboxylase zinc finger domain D1107_03060 PF01039 Carboxyl transferase domain D1107_03065 PF08245 Mur ligase middle domain D1107_03075 PF17384 RimP C-terminal SH3 domain D1107_03075 PF02576 RimP N-terminal domain D1107_03080 PF00575 S1 RNA binding domain D1107_03080 PF08529 NusA N-terminal domain D1107_03080 PF13184 NusA-like KH domain D1107_03085 PF04760 Translation initiation factor IF-2, N-terminal region D1107_03085 PF00009 Elongation factor Tu GTP binding domain D1107_03085 PF11987 Translation-initiation factor 2 D1107_03090 PF02033 Ribosome-binding factor A D1107_03095 PF09157 Pseudouridine synthase II TruB, C-terminal D1107_03095 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1107_03095 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1107_03100 PF13406 Transglycosylase SLT domain D1107_03105 PF07411 Domain of unknown function (DUF1508) D1107_03110 PF07085 DRTGG domain D1107_03110 PF01515 Phosphate acetyl/butaryl transferase D1107_03115 PF00871 Acetokinase family D1107_03120 PF02872 5'-nucleotidase, C-terminal domain D1107_03120 PF00149 Calcineurin-like phosphoesterase D1107_03125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D1107_03130 PF13609 Gram-negative porin D1107_03140 PF00483 Nucleotidyl transferase D1107_03145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1107_03145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1107_03145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1107_03145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1107_03150 PF02599 Global regulator protein family D1107_03155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1107_03155 PF01411 tRNA synthetases class II (A) D1107_03155 PF02272 DHHA1 domain D1107_03160 PF00582 Universal stress protein family D1107_03165 PF00325 Bacterial regulatory proteins, crp family D1107_03165 PF00027 Cyclic nucleotide-binding domain D1107_03180 PF04386 Stringent starvation protein B D1107_03185 PF00043 Glutathione S-transferase, C-terminal domain D1107_03185 PF02798 Glutathione S-transferase, N-terminal domain D1107_03190 PF00731 AIR carboxylase D1107_03195 PF00710 Asparaginase, N-terminal D1107_03195 PF17763 Glutaminase/Asparaginase C-terminal domain D1107_03200 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1107_03200 PF02222 ATP-grasp domain D1107_03205 PF00155 Aminotransferase class I and II D1107_03210 PF00557 Metallopeptidase family M24 D1107_03210 PF05195 Aminopeptidase P, N-terminal domain D1107_03225 PF17757 UvrB interaction domain D1107_03225 PF12344 Ultra-violet resistance protein B D1107_03225 PF02151 UvrB/uvrC motif D1107_03225 PF04851 Type III restriction enzyme, res subunit D1107_03225 PF00271 Helicase conserved C-terminal domain D1107_03230 PF09375 Imelysin D1107_03235 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1107_03235 PF04261 Dyp-type peroxidase family D1107_03245 PF02811 PHP domain D1107_03255 PF00929 Exonuclease D1107_03255 PF08411 Exonuclease C-terminal D1107_03260 PF00654 Voltage gated chloride channel D1107_03265 PF01336 OB-fold nucleic acid binding domain D1107_03265 PF00152 tRNA synthetases class II (D, K and N) D1107_03270 PF04055 Radical SAM superfamily D1107_03280 PF08207 Elongation factor P (EF-P) KOW-like domain D1107_03280 PF09285 Elongation factor P, C-terminal D1107_03280 PF01132 Elongation factor P (EF-P) OB domain D1107_03285 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1107_03285 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1107_03290 PF07690 Major Facilitator Superfamily D1107_03295 PF01464 Transglycosylase SLT domain D1107_03295 PF14718 Soluble lytic murein transglycosylase L domain D1107_03300 PF00156 Phosphoribosyl transferase domain D1107_03305 PF01053 Cys/Met metabolism PLP-dependent enzyme D1107_03310 PF05173 Dihydrodipicolinate reductase, C-terminus D1107_03310 PF01113 Dihydrodipicolinate reductase, N-terminus D1107_03315 PF01728 FtsJ-like methyltransferase D1107_03315 PF18125 RlmM ferredoxin-like domain D1107_03320 PF04241 Protein of unknown function (DUF423) D1107_03325 PF09330 D-lactate dehydrogenase, membrane binding D1107_03325 PF01565 FAD binding domain D1107_03340 PF01568 Molydopterin dinucleotide binding domain D1107_03340 PF18364 Molybdopterin oxidoreductase N-terminal domain D1107_03340 PF00384 Molybdopterin oxidoreductase D1107_03345 PF03264 NapC/NirT cytochrome c family, N-terminal region D1107_03350 PF06463 Molybdenum Cofactor Synthesis C D1107_03350 PF04055 Radical SAM superfamily D1107_03355 PF01967 MoaC family D1107_03360 PF02597 ThiS family D1107_03365 PF02391 MoaE protein D1107_03370 PF02130 Uncharacterized protein family UPF0054 D1107_03375 PF17176 tRNA-binding domain D1107_03375 PF13718 GNAT acetyltransferase 2 D1107_03375 PF05127 Helicase D1107_03380 PF01131 DNA topoisomerase D1107_03380 PF08272 Topoisomerase I zinc-ribbon-like D1107_03380 PF01396 Topoisomerase DNA binding C4 zinc finger D1107_03380 PF01751 Toprim domain D1107_03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_03385 PF03466 LysR substrate binding domain D1107_03390 PF00583 Acetyltransferase (GNAT) family D1107_03390 PF00696 Amino acid kinase family D1107_03395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1107_03400 PF00155 Aminotransferase class I and II D1107_03405 PF01053 Cys/Met metabolism PLP-dependent enzyme D1107_03410 PF00266 Aminotransferase class-V D1107_03415 PF00176 SNF2 family N-terminal domain D1107_03415 PF00271 Helicase conserved C-terminal domain D1107_03435 PF01380 SIS domain D1107_03435 PF01418 Helix-turn-helix domain, rpiR family D1107_03440 PF04074 YhcH/YjgK/YiaL D1107_03445 PF02541 Ppx/GppA phosphatase family D1107_03450 PF04363 Protein of unknown function (DUF496) D1107_03455 PF01842 ACT domain D1107_03455 PF00696 Amino acid kinase family D1107_03460 PF03477 ATP cone domain D1107_03465 PF05166 YcgL domain D1107_03470 PF00772 DnaB-like helicase N terminal domain D1107_03470 PF03796 DnaB-like helicase C terminal domain D1107_03475 PF01497 Periplasmic binding protein D1107_03480 PF01032 FecCD transport family D1107_03485 PF01032 FecCD transport family D1107_03490 PF00005 ABC transporter D1107_03495 PF01865 Protein of unknown function DUF47 D1107_03500 PF01384 Phosphate transporter family D1107_03505 PF08239 Bacterial SH3 domain D1107_03515 PF01814 Hemerythrin HHE cation binding domain D1107_03520 PF01702 Queuine tRNA-ribosyltransferase D1107_03530 PF00313 'Cold-shock' DNA-binding domain D1107_03535 PF00484 Carbonic anhydrase D1107_03540 PF00205 Thiamine pyrophosphate enzyme, central domain D1107_03540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1107_03540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1107_03545 PF10369 Small subunit of acetolactate synthase D1107_03550 PF01523 Putative modulator of DNA gyrase D1107_03555 PF04751 Protein of unknown function (DUF615) D1107_03560 PF04247 Invasion gene expression up-regulator, SirB D1107_03565 PF02441 Flavoprotein D1107_03580 PF01253 Translation initiation factor SUI1 D1107_03585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1107_03590 PF18073 Rubredoxin metal binding domain D1107_03595 PF06305 Lipopolysaccharide assembly protein A domain D1107_03600 PF00216 Bacterial DNA-binding protein D1107_03605 PF00575 S1 RNA binding domain D1107_03610 PF02224 Cytidylate kinase D1107_03615 PF13180 PDZ domain D1107_03625 PF03840 Preprotein translocase SecG subunit D1107_03630 PF01131 DNA topoisomerase D1107_03630 PF01751 Toprim domain D1107_03635 PF00245 Alkaline phosphatase D1107_03640 PF03411 Penicillin-insensitive murein endopeptidase D1107_03645 PF01264 Chorismate synthase D1107_03650 PF12795 Mechanosensitive ion channel porin domain D1107_03650 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1107_03650 PF00924 Mechanosensitive ion channel D1107_03655 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1107_03655 PF00924 Mechanosensitive ion channel D1107_03655 PF12795 Mechanosensitive ion channel porin domain D1107_03660 PF00501 AMP-binding enzyme D1107_03665 PF17206 SeqA protein N-terminal domain D1107_03665 PF03925 SeqA protein C-terminal domain D1107_03670 PF00561 alpha/beta hydrolase fold D1107_03675 PF13649 Methyltransferase domain D1107_03695 PF00575 S1 RNA binding domain D1107_03695 PF00773 RNB domain D1107_03695 PF08206 Ribonuclease B OB domain D1107_03700 PF03788 LrgA family D1107_03705 PF04172 LrgB-like family D1107_03710 PF00149 Calcineurin-like phosphoesterase D1107_03720 PF03889 Alternative ribosome-rescue factor A D1107_03725 PF13649 Methyltransferase domain D1107_03730 PF01594 AI-2E family transporter D1107_03735 PF01933 Uncharacterised protein family UPF0052 D1107_03740 PF02547 Queuosine biosynthesis protein D1107_03745 PF00753 Metallo-beta-lactamase superfamily D1107_03745 PF13567 Domain of unknown function (DUF4131) D1107_03745 PF03772 Competence protein D1107_03750 PF00375 Sodium:dicarboxylate symporter family D1107_03755 PF01219 Prokaryotic diacylglycerol kinase D1107_03760 PF00149 Calcineurin-like phosphoesterase D1107_03760 PF02872 5'-nucleotidase, C-terminal domain D1107_03780 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1107_03780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1107_03785 PF00364 Biotin-requiring enzyme D1107_03785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1107_03785 PF02817 e3 binding domain D1107_03790 PF17831 Pyruvate dehydrogenase E1 component middle domain D1107_03790 PF00456 Transketolase, thiamine diphosphate binding domain D1107_03795 PF01180 Dihydroorotate dehydrogenase D1107_03800 PF14572 Phosphoribosyl synthetase-associated domain D1107_03800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1107_03805 PF08544 GHMP kinases C terminal D1107_03805 PF00288 GHMP kinases N terminal domain D1107_03810 PF03550 Outer membrane lipoprotein LolB D1107_03815 PF00664 ABC transporter transmembrane region D1107_03815 PF00005 ABC transporter D1107_03820 PF04172 LrgB-like family D1107_03830 PF06733 DEAD_2 D1107_03830 PF13307 Helicase C-terminal domain D1107_03840 PF17760 UvrA interaction domain D1107_03840 PF17755 UvrA DNA-binding domain D1107_03845 PF00436 Single-strand binding protein family D1107_03860 PF01420 Type I restriction modification DNA specificity domain D1107_03870 PF02384 N-6 DNA Methylase D1107_03880 PF03466 LysR substrate binding domain D1107_03880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_03885 PF07669 Eco57I restriction-modification methylase D1107_03890 PF09545 AccI restriction endonuclease D1107_03895 PF03060 Nitronate monooxygenase D1107_03905 PF04237 YjbR D1107_03910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1107_03910 PF00005 ABC transporter D1107_03915 PF00528 Binding-protein-dependent transport system inner membrane component D1107_03915 PF12911 N-terminal TM domain of oligopeptide transport permease C D1107_03920 PF00528 Binding-protein-dependent transport system inner membrane component D1107_03925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1107_03930 PF18024 Helix-turn-helix domain D1107_03930 PF00158 Sigma-54 interaction domain D1107_03935 PF13580 SIS domain D1107_03940 PF01293 Phosphoenolpyruvate carboxykinase D1107_03945 PF04977 Septum formation initiator D1107_03950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1107_03955 PF02542 YgbB family D1107_03965 PF00884 Sulfatase D1107_03970 PF00111 2Fe-2S iron-sulfur cluster binding domain D1107_03970 PF03476 MOSC N-terminal beta barrel domain D1107_03970 PF03473 MOSC domain D1107_03975 PF02609 Exonuclease VII small subunit D1107_03980 PF00348 Polyprenyl synthetase D1107_03990 PF01336 OB-fold nucleic acid binding domain D1107_03990 PF00152 tRNA synthetases class II (D, K and N) D1107_03995 PF10150 Ribonuclease E/G family D1107_03995 PF00575 S1 RNA binding domain D1107_04000 PF18381 YcaO cyclodehydratase C-terminal domain D1107_04000 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D1107_04005 PF08774 VRR-NUC domain D1107_04005 PF04851 Type III restriction enzyme, res subunit D1107_04010 PF01555 DNA methylase D1107_04010 PF18273 Type III R-M EcoP15I C-terminal domain D1107_04015 PF08003 Protein of unknown function (DUF1698) D1107_04025 PF06725 3D domain D1107_04025 PF03562 MltA specific insert domain D1107_04035 PF02601 Exonuclease VII, large subunit D1107_04035 PF13742 OB-fold nucleic acid binding domain D1107_04045 PF00576 HIUase/Transthyretin family D1107_04050 PF00356 Bacterial regulatory proteins, lacI family D1107_04050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1107_04055 PF09335 SNARE associated Golgi protein D1107_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1107_04060 PF00986 DNA gyrase B subunit, carboxyl terminus D1107_04060 PF01751 Toprim domain D1107_04060 PF18053 DNA gyrase B subunit insert domain D1107_04060 PF00204 DNA gyrase B D1107_04065 PF01040 UbiA prenyltransferase family D1107_04070 PF08220 DeoR-like helix-turn-helix domain D1107_04070 PF00455 DeoR C terminal sensor domain D1107_04075 PF00206 Lyase D1107_04075 PF08328 Adenylosuccinate lyase C-terminal D1107_04080 PF04356 Protein of unknown function (DUF489) D1107_04085 PF00005 ABC transporter D1107_04085 PF00664 ABC transporter transmembrane region D1107_04090 PF00664 ABC transporter transmembrane region D1107_04090 PF00005 ABC transporter D1107_04095 PF04357 TamB, inner membrane protein subunit of TAM complex D1107_04100 PF01103 Surface antigen D1107_04100 PF17243 POTRA domain TamA domain 1 D1107_04105 PF04748 Divergent polysaccharide deacetylase D1107_04110 PF01551 Peptidase family M23 D1107_04115 PF00300 Histidine phosphatase superfamily (branch 1) D1107_04120 PF01810 LysE type translocator D1107_04125 PF00485 Phosphoribulokinase / Uridine kinase family D1107_04130 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) D1107_04135 PF00440 Bacterial regulatory proteins, tetR family D1107_04135 PF14278 Transcriptional regulator C-terminal region D1107_04140 PF13533 Biotin-lipoyl like D1107_04145 PF00005 ABC transporter D1107_04155 PF02321 Outer membrane efflux protein D1107_04160 PF02233 NAD(P) transhydrogenase beta subunit D1107_04165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1107_04165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D1107_04165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1107_04170 PF00588 SpoU rRNA Methylase family D1107_04175 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1107_04175 PF14489 QueF-like protein D1107_04185 PF00578 AhpC/TSA family D1107_04190 PF04055 Radical SAM superfamily D1107_04190 PF06969 HemN C-terminal domain D1107_04195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1107_04200 PF00528 Binding-protein-dependent transport system inner membrane component D1107_04205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1107_04205 PF00005 ABC transporter D1107_04210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1107_04210 PF00005 ABC transporter D1107_04215 PF00890 FAD binding domain D1107_04220 PF01717 Cobalamin-independent synthase, Catalytic domain D1107_04225 PF02219 Methylenetetrahydrofolate reductase D1107_04230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1107_04235 PF03222 Tryptophan/tyrosine permease family D1107_04240 PF03315 Serine dehydratase beta chain D1107_04240 PF03313 Serine dehydratase alpha chain D1107_04245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D1107_04245 PF01266 FAD dependent oxidoreductase D1107_04250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1107_04250 PF00218 Indole-3-glycerol phosphate synthase D1107_04255 PF12728 Helix-turn-helix domain D1107_04255 PF02661 Fic/DOC family D1107_04260 PF04287 tRNA pseudouridine synthase C D1107_04265 PF00849 RNA pseudouridylate synthase D1107_04270 PF03701 Uncharacterised protein family (UPF0181) D1107_04280 PF01928 CYTH domain D1107_04285 PF04317 YcjX-like family, DUF463 D1107_04290 PF01668 SmpB protein D1107_04295 PF02403 Seryl-tRNA synthetase N-terminal domain D1107_04295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1107_04300 PF01546 Peptidase family M20/M25/M40 D1107_04300 PF07687 Peptidase dimerisation domain D1107_04305 PF03606 C4-dicarboxylate anaerobic carrier D1107_04310 PF03575 Peptidase family S51 D1107_04315 PF13603 Leucyl-tRNA synthetase, Domain 2 D1107_04315 PF00133 tRNA synthetases class I (I, L, M and V) D1107_04315 PF08264 Anticodon-binding domain of tRNA D1107_04320 PF04390 Lipopolysaccharide-assembly D1107_04325 PF06144 DNA polymerase III, delta subunit D1107_04325 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D1107_04330 PF03884 DNA gyrase inhibitor YacG D1107_04335 PF01121 Dephospho-CoA kinase D1107_04345 PF00482 Type II secretion system (T2SS), protein F D1107_04350 PF00437 Type II/IV secretion system protein D1107_04350 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1107_04355 PF07963 Prokaryotic N-terminal methylation motif D1107_04360 PF18073 Rubredoxin metal binding domain D1107_04370 PF00186 Dihydrofolate reductase D1107_04375 PF01472 PUA domain D1107_04375 PF00696 Amino acid kinase family D1107_04380 PF01925 Sulfite exporter TauE/SafE D1107_04385 PF00730 HhH-GPD superfamily base excision DNA repair protein D1107_04385 PF00633 Helix-hairpin-helix motif D1107_04385 PF10576 Iron-sulfur binding domain of endonuclease III D1107_04390 PF00108 Thiolase, N-terminal domain D1107_04390 PF02803 Thiolase, C-terminal domain D1107_04395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1107_04395 PF00378 Enoyl-CoA hydratase/isomerase D1107_04395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1107_04410 PF02634 FdhD/NarQ family D1107_04415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1107_04415 PF00384 Molybdopterin oxidoreductase D1107_04415 PF01568 Molydopterin dinucleotide binding domain D1107_04420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1107_04420 PF00384 Molybdopterin oxidoreductase D1107_04420 PF01568 Molydopterin dinucleotide binding domain D1107_04425 PF13247 4Fe-4S dicluster domain D1107_04425 PF09163 Formate dehydrogenase N, transmembrane D1107_04430 PF01292 Prokaryotic cytochrome b561 D1107_04435 PF04216 Protein involved in formate dehydrogenase formation D1107_04450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1107_04450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1107_04460 PF00701 Dihydrodipicolinate synthetase family D1107_04465 PF03279 Bacterial lipid A biosynthesis acyltransferase D1107_04470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1107_04475 PF01416 tRNA pseudouridine synthase D1107_04480 PF01227 GTP cyclohydrolase I D1107_04495 PF12464 Maltose acetyltransferase D1107_04495 PF14602 Hexapeptide repeat of succinyl-transferase D1107_04505 PF03466 LysR substrate binding domain D1107_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_04510 PF03180 NLPA lipoprotein D1107_04515 PF03180 NLPA lipoprotein D1107_04520 PF00528 Binding-protein-dependent transport system inner membrane component D1107_04525 PF00005 ABC transporter D1107_04525 PF09383 NIL domain D1107_04535 PF01406 tRNA synthetases class I (C) catalytic domain D1107_04535 PF09190 DALR domain D1107_04540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1107_04545 PF01743 Poly A polymerase head domain D1107_04545 PF12627 Probable RNA and SrmB- binding site of polymerase A D1107_04545 PF01966 HD domain D1107_04555 PF07715 TonB-dependent Receptor Plug Domain D1107_04555 PF00593 TonB dependent receptor D1107_04580 PF04384 Iron-sulphur cluster assembly D1107_04585 PF00111 2Fe-2S iron-sulfur cluster binding domain D1107_04590 PF00012 Hsp70 protein D1107_04595 PF10946 Protein of unknown function DUF2625 D1107_04605 PF07743 HSCB C-terminal oligomerisation domain D1107_04610 PF01521 Iron-sulphur cluster biosynthesis D1107_04615 PF01592 NifU-like N terminal domain D1107_04620 PF00266 Aminotransferase class-V D1107_04625 PF02082 Transcriptional regulator D1107_04630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1107_04635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1107_04635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1107_04640 PF00072 Response regulator receiver domain D1107_04640 PF00989 PAS fold D1107_04640 PF18415 Histidine kinase receptor ArcB trans-membrane domain D1107_04640 PF00512 His Kinase A (phospho-acceptor) domain D1107_04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1107_04640 PF01627 Hpt domain D1107_04650 PF01713 Smr domain D1107_04660 PF08241 Methyltransferase domain D1107_04665 PF04301 Protein of unknown function (DUF452) D1107_04670 PF00155 Aminotransferase class I and II D1107_04675 PF00202 Aminotransferase class-III D1107_04680 PF05175 Methyltransferase small domain D1107_04685 PF03449 Transcription elongation factor, N-terminal D1107_04685 PF01272 Transcription elongation factor, GreA/GreB, C-term D1107_04690 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1107_04700 PF01808 AICARFT/IMPCHase bienzyme D1107_04700 PF02142 MGS-like domain D1107_04720 PF04829 Pre-toxin domain with VENN motif D1107_04720 PF05860 haemagglutination activity domain D1107_04720 PF13332 Hemagglutinin repeat D1107_04720 PF13018 Extended Signal Peptide of Type V secretion system D1107_04730 PF03968 OstA-like protein D1107_04730 PF04453 LPS transport system D D1107_04735 PF04055 Radical SAM superfamily D1107_04735 PF06969 HemN C-terminal domain D1107_04745 PF04220 Der GTPase activator (YihI) D1107_04750 PF06826 Predicted Permease Membrane Region D1107_04750 PF02080 TrkA-C domain D1107_04755 PF03616 Sodium/glutamate symporter D1107_04760 PF06062 Uncharacterised protein family (UPF0231) D1107_04765 PF08335 GlnD PII-uridylyltransferase D1107_04765 PF03710 Glutamate-ammonia ligase adenylyltransferase D1107_04770 PF03795 YCII-related domain D1107_04775 PF03061 Thioesterase superfamily D1107_04780 PF04279 Intracellular septation protein A D1107_04790 PF04217 Protein of unknown function, DUF412 D1107_04795 PF01171 PP-loop family D1107_04800 PF03553 Na+/H+ antiporter family D1107_04800 PF13726 Na+-H+ antiporter family D1107_04805 PF03372 Endonuclease/Exonuclease/phosphatase family D1107_04810 PF03466 LysR substrate binding domain D1107_04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_04830 PF01197 Ribosomal protein L31 D1107_04835 PF02780 Transketolase, C-terminal domain D1107_04835 PF00456 Transketolase, thiamine diphosphate binding domain D1107_04835 PF02779 Transketolase, pyrimidine binding domain D1107_04840 PF00183 Hsp90 protein D1107_04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1107_04845 PF06628 Catalase-related immune-responsive D1107_04845 PF00199 Catalase D1107_04855 PF00149 Calcineurin-like phosphoesterase D1107_04860 PF02867 Ribonucleotide reductase, barrel domain D1107_04860 PF03477 ATP cone domain D1107_04860 PF00317 Ribonucleotide reductase, all-alpha domain D1107_04865 PF00268 Ribonucleotide reductase, small chain D1107_04870 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D1107_04870 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D1107_04875 PF10509 Galactokinase galactose-binding signature D1107_04875 PF08544 GHMP kinases C terminal D1107_04875 PF00288 GHMP kinases N terminal domain D1107_04880 PF01263 Aldose 1-epimerase D1107_04885 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1107_04885 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1107_04885 PF00703 Glycosyl hydrolases family 2 D1107_04885 PF16353 Domain of unknown function(DUF4981) D1107_04885 PF02929 Beta galactosidase small chain D1107_04890 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1107_04890 PF06594 Haemolysin-type calcium binding protein related domain D1107_04900 PF10609 NUBPL iron-transfer P-loop NTPase D1107_04910 PF01914 MarC family integral membrane protein D1107_04915 PF13145 PPIC-type PPIASE domain D1107_04920 PF00999 Sodium/hydrogen exchanger family D1107_04925 PF00312 Ribosomal protein S15 D1107_04930 PF05661 Protein of unknown function (DUF808) D1107_04935 PF07219 HemY protein N-terminus D1107_04940 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D1107_04945 PF02602 Uroporphyrinogen-III synthase HemD D1107_04950 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1107_04950 PF03900 Porphobilinogen deaminase, C-terminal domain D1107_04955 PF00171 Aldehyde dehydrogenase family D1107_04955 PF00465 Iron-containing alcohol dehydrogenase D1107_04960 PF00118 TCP-1/cpn60 chaperonin family D1107_04965 PF00166 Chaperonin 10 Kd subunit D1107_04970 PF01048 Phosphorylase superfamily D1107_04975 PF01791 DeoC/LacD family aldolase D1107_04980 PF07670 Nucleoside recognition D1107_04980 PF07662 Na+ dependent nucleoside transporter C-terminus D1107_04980 PF01773 Na+ dependent nucleoside transporter N-terminus D1107_04990 PF01081 KDPG and KHG aldolase D1107_04995 PF00294 pfkB family carbohydrate kinase D1107_05010 PF00392 Bacterial regulatory proteins, gntR family D1107_05010 PF07729 FCD domain D1107_05020 PF01641 SelR domain D1107_05020 PF01625 Peptide methionine sulfoxide reductase D1107_05025 PF00535 Glycosyl transferase family 2 D1107_05030 PF00535 Glycosyl transferase family 2 D1107_05040 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1107_05050 PF04230 Polysaccharide pyruvyl transferase D1107_05055 PF02698 DUF218 domain D1107_05060 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1107_05060 PF18074 Primosomal protein N C-terminal domain D1107_05060 PF17764 3′ DNA-binding domain (3′BD) D1107_05060 PF00271 Helicase conserved C-terminal domain D1107_05060 PF00270 DEAD/DEAH box helicase D1107_05065 PF00800 Prephenate dehydratase D1107_05065 PF01817 Chorismate mutase type II D1107_05070 PF01432 Peptidase family M3 D1107_05075 PF04055 Radical SAM superfamily D1107_05080 PF01228 Glycine radical D1107_05080 PF02901 Pyruvate formate lyase-like D1107_05085 PF01226 Formate/nitrite transporter D1107_05095 PF01435 Peptidase family M48 D1107_05100 PF11798 IMS family HHH motif D1107_05100 PF11799 impB/mucB/samB family C-terminal domain D1107_05100 PF00817 impB/mucB/samB family D1107_05105 PF03956 Lysine exporter LysO D1107_05110 PF00425 chorismate binding enzyme D1107_05115 PF00155 Aminotransferase class I and II D1107_05120 PF00892 EamA-like transporter family D1107_05125 PF00892 EamA-like transporter family D1107_05130 PF01810 LysE type translocator D1107_05135 PF00593 TonB dependent receptor D1107_05135 PF04886 PT repeat D1107_05135 PF07715 TonB-dependent Receptor Plug Domain D1107_05140 PF01243 Pyridoxamine 5'-phosphate oxidase D1107_05150 PF03918 Cytochrome C biogenesis protein D1107_05155 PF08534 Redoxin D1107_05160 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1107_05160 PF01578 Cytochrome C assembly protein D1107_05165 PF02254 TrkA-N domain D1107_05165 PF00999 Sodium/hydrogen exchanger family D1107_05170 PF12633 Adenylate cyclase NT domain D1107_05170 PF01295 Adenylate cyclase, class-I D1107_05175 PF02801 Beta-ketoacyl synthase, C-terminal domain D1107_05175 PF00109 Beta-ketoacyl synthase, N-terminal domain D1107_05185 PF04076 Bacterial OB fold (BOF) protein D1107_05200 PF00486 Transcriptional regulatory protein, C terminal D1107_05200 PF00072 Response regulator receiver domain D1107_05205 PF00512 His Kinase A (phospho-acceptor) domain D1107_05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1107_05205 PF08521 Two-component sensor kinase N-terminal D1107_05210 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D1107_05215 PF02699 Preprotein translocase subunit D1107_05220 PF13721 SecD export protein N-terminal TM region D1107_05220 PF07549 SecD/SecF GG Motif D1107_05220 PF02355 Protein export membrane protein D1107_05225 PF02355 Protein export membrane protein D1107_05225 PF07549 SecD/SecF GG Motif D1107_05230 PF00210 Ferritin-like domain D1107_05235 PF00210 Ferritin-like domain D1107_05240 PF00860 Permease family D1107_05245 PF02545 Maf-like protein D1107_05255 PF02568 Thiamine biosynthesis protein (ThiI) D1107_05255 PF02926 THUMP domain D1107_05260 PF00709 Adenylosuccinate synthetase D1107_05265 PF01145 SPFH domain / Band 7 family D1107_05270 PF01145 SPFH domain / Band 7 family D1107_05275 PF00085 Thioredoxin D1107_05280 PF00860 Permease family D1107_05285 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1107_05285 PF02772 S-adenosylmethionine synthetase, central domain D1107_05285 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1107_05295 PF13520 Amino acid permease D1107_05300 PF13520 Amino acid permease D1107_05310 PF07687 Peptidase dimerisation domain D1107_05310 PF01546 Peptidase family M20/M25/M40 D1107_05315 PF03922 OmpW family D1107_05320 PF00004 ATPase family associated with various cellular activities (AAA) D1107_05320 PF07724 AAA domain (Cdc48 subfamily) D1107_05320 PF17871 AAA lid domain D1107_05320 PF10431 C-terminal, D2-small domain, of ClpB protein D1107_05320 PF02861 Clp amino terminal domain, pathogenicity island component D1107_05325 PF01758 Sodium Bile acid symporter family D1107_05330 PF03960 ArsC family D1107_05340 PF00206 Lyase D1107_05340 PF10415 Fumarase C C-terminus D1107_05350 PF02769 AIR synthase related protein, C-terminal domain D1107_05350 PF00586 AIR synthase related protein, N-terminal domain D1107_05355 PF04650 YSIRK type signal peptide D1107_05355 PF00746 LPXTG cell wall anchor motif D1107_05355 PF00728 Glycosyl hydrolase family 20, catalytic domain D1107_05355 PF07501 G5 domain D1107_05360 PF06508 Queuosine biosynthesis protein QueC D1107_05365 PF01242 6-pyruvoyl tetrahydropterin synthase D1107_05370 PF04055 Radical SAM superfamily D1107_05385 PF02789 Cytosol aminopeptidase family, N-terminal domain D1107_05385 PF00883 Cytosol aminopeptidase family, catalytic domain D1107_05395 PF03739 Lipopolysaccharide export system permease LptF/LptG D1107_05400 PF03739 Lipopolysaccharide export system permease LptF/LptG D1107_05405 PF01336 OB-fold nucleic acid binding domain D1107_05405 PF02811 PHP domain D1107_05405 PF14579 Helix-hairpin-helix motif D1107_05405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1107_05405 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1107_05425 PF01370 NAD dependent epimerase/dehydratase family D1107_05425 PF02222 ATP-grasp domain D1107_05430 PF01553 Acyltransferase D1107_05435 PF01726 LexA DNA binding domain D1107_05435 PF00717 Peptidase S24-like D1107_05440 PF02976 DNA mismatch repair enzyme MutH D1107_05445 PF03741 Integral membrane protein TerC family D1107_05450 PF00933 Glycosyl hydrolase family 3 N terminal domain D1107_05455 PF05958 tRNA (Uracil-5-)-methyltransferase D1107_05460 PF00113 Enolase, C-terminal TIM barrel domain D1107_05460 PF03952 Enolase, N-terminal domain D1107_05465 PF00293 NUDIX domain D1107_05470 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) D1107_05475 PF00270 DEAD/DEAH box helicase D1107_05475 PF00271 Helicase conserved C-terminal domain D1107_05475 PF16124 RecQ zinc-binding D1107_05475 PF09382 RQC domain D1107_05475 PF00570 HRDC domain D1107_05480 PF01491 Frataxin-like domain D1107_05485 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1107_05490 PF00814 Glycoprotease family D1107_05495 PF13525 Outer membrane lipoprotein D1107_05500 PF01479 S4 domain D1107_05500 PF00849 RNA pseudouridylate synthase D1107_05505 PF14256 YwiC-like protein D1107_05510 PF00365 Phosphofructokinase D1107_05515 PF00266 Aminotransferase class-V D1107_05520 PF00565 Staphylococcal nuclease homologue D1107_05525 PF01235 Sodium:alanine symporter family D1107_05530 PF01594 AI-2E family transporter D1107_05540 PF16325 Peptidase family U32 C-terminal domain D1107_05540 PF01136 Peptidase family U32 D1107_05545 PF04932 O-Antigen ligase D1107_05550 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1107_05550 PF00534 Glycosyl transferases group 1 D1107_05555 PF01467 Cytidylyltransferase-like D1107_05560 PF00929 Exonuclease D1107_05565 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1107_05570 PF01476 LysM domain D1107_05570 PF01520 N-acetylmuramoyl-L-alanine amidase D1107_05575 PF00342 Phosphoglucose isomerase D1107_05580 PF04380 Membrane fusogenic activity D1107_05605 PF08501 Shikimate dehydrogenase substrate binding domain D1107_05605 PF01488 Shikimate / quinate 5-dehydrogenase D1107_05605 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1107_05610 PF01300 Telomere recombination D1107_05615 PF01396 Topoisomerase DNA binding C4 zinc finger D1107_05620 PF04266 ASCH domain D1107_05625 PF02631 RecX family D1107_05630 PF00154 recA bacterial DNA recombination protein D1107_05635 PF01063 Amino-transferase class IV D1107_05640 PF00425 chorismate binding enzyme D1107_05645 PF02646 RmuC family D1107_05650 PF00117 Glutamine amidotransferase class-I D1107_05655 PF03625 Domain of unknown function DUF302 D1107_05655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1107_05660 PF01336 OB-fold nucleic acid binding domain D1107_05660 PF00152 tRNA synthetases class II (D, K and N) D1107_05660 PF02938 GAD domain D1107_05665 PF00293 NUDIX domain D1107_05670 PF01709 Transcriptional regulator D1107_05680 PF02075 Crossover junction endodeoxyribonuclease RuvC D1107_05685 PF05193 Peptidase M16 inactive domain D1107_05685 PF00675 Insulinase (Peptidase family M16) D1107_05690 PF01717 Cobalamin-independent synthase, Catalytic domain D1107_05690 PF08267 Cobalamin-independent synthase, N-terminal domain D1107_05695 PF00939 Sodium:sulfate symporter transmembrane region D1107_05700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_05700 PF03466 LysR substrate binding domain D1107_05705 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1107_05710 PF01479 S4 domain D1107_05710 PF00849 RNA pseudouridylate synthase D1107_05715 PF01300 Telomere recombination D1107_05725 PF04261 Dyp-type peroxidase family D1107_05730 PF00425 chorismate binding enzyme D1107_05730 PF04715 Anthranilate synthase component I, N terminal region D1107_05735 PF00117 Glutamine amidotransferase class-I D1107_05740 PF00591 Glycosyl transferase family, a/b domain D1107_05740 PF02885 Glycosyl transferase family, helical bundle domain D1107_05745 PF08241 Methyltransferase domain D1107_05750 PF16036 Chalcone isomerase-like D1107_05755 PF04325 Protein of unknown function (DUF465) D1107_05770 PF01281 Ribosomal protein L9, N-terminal domain D1107_05770 PF03948 Ribosomal protein L9, C-terminal domain D1107_05775 PF01084 Ribosomal protein S18 D1107_05780 PF00436 Single-strand binding protein family D1107_05785 PF01250 Ribosomal protein S6 D1107_05790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1107_05790 PF02843 Phosphoribosylglycinamide synthetase, C domain D1107_05790 PF02844 Phosphoribosylglycinamide synthetase, N domain D1107_05800 PF09976 Tetratricopeptide repeat-like domain D1107_05805 PF03129 Anticodon binding domain D1107_05805 PF13393 Histidyl-tRNA synthetase D1107_05810 PF04551 GcpE protein D1107_05815 PF13464 Domain of unknown function (DUF4115) D1107_05820 PF00916 Sulfate permease family D1107_05820 PF01740 STAS domain D1107_05830 PF14698 Argininosuccinate lyase C-terminal D1107_05830 PF00206 Lyase D1107_05835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D1107_05835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D1107_05840 PF02254 TrkA-N domain D1107_05840 PF00999 Sodium/hydrogen exchanger family D1107_05860 PF03466 LysR substrate binding domain D1107_05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_05875 PF12833 Helix-turn-helix domain D1107_05875 PF06719 AraC-type transcriptional regulator N-terminus D1107_05880 PF03466 LysR substrate binding domain D1107_05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_05885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1107_05890 PF00296 Luciferase-like monooxygenase D1107_05895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1107_05895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1107_05900 PF00881 Nitroreductase family D1107_05905 PF01914 MarC family integral membrane protein D1107_05910 PF03852 DNA mismatch endonuclease Vsr D1107_05920 PF00145 C-5 cytosine-specific DNA methylase D1107_05930 PF00756 Putative esterase D1107_05950 PF00107 Zinc-binding dehydrogenase D1107_05950 PF08240 Alcohol dehydrogenase GroES-like domain D1107_05955 PF02028 BCCT, betaine/carnitine/choline family transporter D1107_05970 PF03595 Voltage-dependent anion channel D1107_05975 PF13419 Haloacid dehalogenase-like hydrolase D1107_05990 PF00664 ABC transporter transmembrane region D1107_05990 PF00005 ABC transporter D1107_05995 PF02664 S-Ribosylhomocysteinase (LuxS) D1107_06000 PF02470 MlaD protein D1107_06005 PF01475 Ferric uptake regulator family D1107_06010 PF00258 Flavodoxin D1107_06015 PF01402 Ribbon-helix-helix protein, copG family D1107_06020 PF04073 Aminoacyl-tRNA editing domain D1107_06030 PF00860 Permease family D1107_06035 PF02635 DsrE/DsrF-like family D1107_06045 PF01176 Translation initiation factor 1A / IF-1 D1107_06050 PF10144 Bacterial virulence factor haemolysin D1107_06055 PF18429 Domain of unknown function (DUF5609) D1107_06060 PF04461 Protein of unknown function (DUF520) D1107_06070 PF00343 Carbohydrate phosphorylase D1107_06075 PF17874 MalT-like TPR region D1107_06075 PF00196 Bacterial regulatory proteins, luxR family D1107_06080 PF07148 Maltose operon periplasmic protein precursor (MalM) D1107_06085 PF02264 LamB porin D1107_06090 PF00005 ABC transporter D1107_06090 PF17912 MalK OB fold domain D1107_06095 PF01547 Bacterial extracellular solute-binding protein D1107_06100 PF00528 Binding-protein-dependent transport system inner membrane component D1107_06100 PF14785 Maltose transport system permease protein MalF P2 domain D1107_06105 PF00528 Binding-protein-dependent transport system inner membrane component D1107_06110 PF02446 4-alpha-glucanotransferase D1107_06115 PF02554 Carbon starvation protein CstA D1107_06120 PF01026 TatD related DNase D1107_06125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1107_06125 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1107_06130 PF03350 Uncharacterized protein family, UPF0114 D1107_06135 PF00881 Nitroreductase family D1107_06150 PF00005 ABC transporter D1107_06155 PF01116 Fructose-bisphosphate aldolase class-II D1107_06160 PF00162 Phosphoglycerate kinase D1107_06165 PF00939 Sodium:sulfate symporter transmembrane region D1107_06170 PF00939 Sodium:sulfate symporter transmembrane region D1107_06175 PF00939 Sodium:sulfate symporter transmembrane region D1107_06180 PF00204 DNA gyrase B D1107_06180 PF00986 DNA gyrase B subunit, carboxyl terminus D1107_06180 PF01751 Toprim domain D1107_06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1107_06190 PF00486 Transcriptional regulatory protein, C terminal D1107_06190 PF00072 Response regulator receiver domain D1107_06215 PF00376 MerR family regulatory protein D1107_06215 PF09278 MerR, DNA binding D1107_06225 PF00403 Heavy-metal-associated domain D1107_06230 PF00403 Heavy-metal-associated domain D1107_06235 PF00106 short chain dehydrogenase D1107_06240 PF00881 Nitroreductase family D1107_06245 PF01343 Peptidase family S49 D1107_06250 PF00445 Ribonuclease T2 family D1107_06255 PF10263 SprT-like family D1107_06255 PF17283 SprT-like zinc ribbon domain D1107_06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1107_06265 PF16921 Tex protein YqgF-like domain D1107_06265 PF09371 Tex-like protein N-terminal domain D1107_06265 PF00575 S1 RNA binding domain D1107_06265 PF17674 HHH domain D1107_06275 PF04055 Radical SAM superfamily D1107_06300 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1107_06310 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D1107_06315 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D1107_06320 PF03966 Trm112p-like protein D1107_06325 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1107_06330 PF07724 AAA domain (Cdc48 subfamily) D1107_06330 PF06689 ClpX C4-type zinc finger D1107_06330 PF10431 C-terminal, D2-small domain, of ClpB protein D1107_06340 PF02657 Fe-S metabolism associated domain D1107_06355 PF00929 Exonuclease D1107_06360 PF12848 ABC transporter D1107_06360 PF00005 ABC transporter D1107_06365 PF02627 Carboxymuconolactone decarboxylase family D1107_06380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1107_06385 PF01722 BolA-like protein D1107_06395 PF05494 MlaC protein D1107_06400 PF02470 MlaD protein D1107_06405 PF02405 Permease MlaE D1107_06410 PF00005 ABC transporter D1107_06415 PF00595 PDZ domain D1107_06420 PF01370 NAD dependent epimerase/dehydratase family D1107_06420 PF08338 Domain of unknown function (DUF1731) D1107_06425 PF01316 Arginine repressor, DNA binding domain D1107_06425 PF02863 Arginine repressor, C-terminal domain D1107_06430 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1107_06430 PF00056 lactate/malate dehydrogenase, NAD binding domain D1107_06440 PF05191 Adenylate kinase, active site lid D1107_06450 PF07690 Major Facilitator Superfamily D1107_06455 PF01370 NAD dependent epimerase/dehydratase family D1107_06460 PF00533 BRCA1 C Terminus (BRCT) domain D1107_06460 PF01653 NAD-dependent DNA ligase adenylation domain D1107_06460 PF03120 NAD-dependent DNA ligase OB-fold domain D1107_06460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1107_06460 PF12826 Helix-hairpin-helix motif D1107_06465 PF04354 ZipA, C-terminal FtsZ-binding domain D1107_06480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1107_06480 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D1107_06490 PF07690 Major Facilitator Superfamily D1107_06495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1107_06500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1107_06500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1107_06505 PF00459 Inositol monophosphatase family D1107_06510 PF00293 NUDIX domain D1107_06515 PF01479 S4 domain D1107_06520 PF01430 Hsp33 protein D1107_06525 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1107_06535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1107_06535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1107_06540 PF00696 Amino acid kinase family D1107_06545 PF00367 phosphotransferase system, EIIB D1107_06545 PF02378 Phosphotransferase system, EIIC D1107_06550 PF00005 ABC transporter D1107_06555 PF00528 Binding-protein-dependent transport system inner membrane component D1107_06560 PF00381 PTS HPr component phosphorylation site D1107_06565 PF05524 PEP-utilising enzyme, N-terminal D1107_06565 PF00391 PEP-utilising enzyme, mobile domain D1107_06565 PF02896 PEP-utilising enzyme, TIM barrel domain D1107_06570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1107_06575 PF00919 Uncharacterized protein family UPF0004 D1107_06575 PF01938 TRAM domain D1107_06575 PF04055 Radical SAM superfamily D1107_06580 PF13361 UvrD-like helicase C-terminal domain D1107_06580 PF00580 UvrD/REP helicase N-terminal domain D1107_06585 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1107_06590 PF01924 Hydrogenase formation hypA family D1107_06595 PF00586 AIR synthase related protein, N-terminal domain D1107_06595 PF02769 AIR synthase related protein, C-terminal domain D1107_06600 PF17788 HypF Kae1-like domain D1107_06600 PF01300 Telomere recombination D1107_06600 PF07503 HypF finger D1107_06600 PF00708 Acylphosphatase D1107_06605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1107_06605 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D1107_06610 PF13247 4Fe-4S dicluster domain D1107_06615 PF03916 Polysulphide reductase, NrfD D1107_06620 PF00374 Nickel-dependent hydrogenase D1107_06625 PF01750 Hydrogenase maturation protease D1107_06630 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D1107_06635 PF01455 HupF/HypC family D1107_06640 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D1107_06675 PF03461 TRCF domain D1107_06675 PF00270 DEAD/DEAH box helicase D1107_06675 PF17757 UvrB interaction domain D1107_06675 PF00271 Helicase conserved C-terminal domain D1107_06675 PF02559 CarD-like/TRCF domain D1107_06680 PF01433 Peptidase family M1 domain D1107_06680 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1107_06680 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1107_06685 PF02660 Glycerol-3-phosphate acyltransferase D1107_06690 PF02152 Dihydroneopterin aldolase D1107_06695 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D1107_06695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1107_06700 PF18075 FtsX extracellular domain D1107_06705 PF00005 ABC transporter D1107_06710 PF00448 SRP54-type protein, GTPase domain D1107_06710 PF02881 SRP54-type protein, helical bundle domain D1107_06720 PF04269 Protein of unknown function, DUF440 D1107_06725 PF01613 Flavin reductase like domain D1107_06730 PF03848 Tellurite resistance protein TehB D1107_06730 PF09313 Domain of unknown function (DUF1971) D1107_06735 PF00528 Binding-protein-dependent transport system inner membrane component D1107_06740 PF00528 Binding-protein-dependent transport system inner membrane component D1107_06745 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1107_06750 PF00005 ABC transporter D1107_06755 PF01161 Phosphatidylethanolamine-binding protein D1107_06760 PF01699 Sodium/calcium exchanger protein D1107_06765 PF01381 Helix-turn-helix D1107_06775 PF02683 Cytochrome C biogenesis protein transmembrane region D1107_06775 PF11412 Disulphide bond corrector protein DsbC D1107_06775 PF13098 Thioredoxin-like domain D1107_06780 PF04315 Elongation factor P hydroxylase D1107_06785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1107_06790 PF04348 LppC putative lipoprotein D1107_06795 PF02021 Uncharacterised protein family UPF0102 D1107_06800 PF13580 SIS domain D1107_06805 PF04972 BON domain D1107_06810 PF01464 Transglycosylase SLT domain D1107_06810 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1107_06830 PF01578 Cytochrome C assembly protein D1107_06830 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1107_06835 PF03100 CcmE D1107_06840 PF04995 Heme exporter protein D (CcmD) D1107_06845 PF01578 Cytochrome C assembly protein D1107_06850 PF03379 CcmB protein D1107_06855 PF00005 ABC transporter D1107_06860 PF00308 Bacterial dnaA protein D1107_06895 PF04277 Oxaloacetate decarboxylase, gamma chain D1107_06900 PF00364 Biotin-requiring enzyme D1107_06900 PF00682 HMGL-like D1107_06900 PF02436 Conserved carboxylase domain D1107_06905 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D1107_06910 PF08274 PhnA Zinc-Ribbon D1107_06910 PF03831 PhnA domain D1107_06915 PF03150 Di-haem cytochrome c peroxidase D1107_06915 PF00034 Cytochrome c D1107_06915 PF14376 Haem-binding domain D1107_06920 PF02594 Uncharacterised ACR, YggU family COG1872 D1107_06925 PF02325 YGGT family D1107_06930 PF04320 Protein with unknown function (DUF469) D1107_06935 PF02390 Putative methyltransferase D1107_06940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1107_06940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1107_06945 PF02504 Fatty acid synthesis protein D1107_06950 PF01783 Ribosomal L32p protein family D1107_06955 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1107_06960 PF01578 Cytochrome C assembly protein D1107_06965 PF01595 Cyclin M transmembrane N-terminal domain D1107_06965 PF03471 Transporter associated domain D1107_06965 PF00571 CBS domain D1107_06970 PF00209 Sodium:neurotransmitter symporter family D1107_06980 PF03830 PTS system sorbose subfamily IIB component D1107_06980 PF03610 PTS system fructose IIA component D1107_06985 PF03609 PTS system sorbose-specific iic component D1107_06990 PF03613 PTS system mannose/fructose/sorbose family IID component D1107_06995 PF06173 Protein of unknown function (DUF986) D1107_07000 PF01238 Phosphomannose isomerase type I D1107_07015 PF03412 Peptidase C39 family D1107_07015 PF00005 ABC transporter D1107_07015 PF00664 ABC transporter transmembrane region D1107_07020 PF08339 RTX C-terminal domain D1107_07020 PF02382 N-terminal domain in RTX protein D1107_07020 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1107_07025 PF02794 RTX toxin acyltransferase family D1107_07040 PF08402 TOBE domain D1107_07040 PF00005 ABC transporter D1107_07045 PF01225 Mur ligase family, catalytic domain D1107_07045 PF08245 Mur ligase middle domain D1107_07045 PF02875 Mur ligase family, glutamate ligase domain D1107_07050 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D1107_07055 PF00462 Glutaredoxin D1107_07055 PF08534 Redoxin D1107_07060 PF03466 LysR substrate binding domain D1107_07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_07065 PF00440 Bacterial regulatory proteins, tetR family D1107_07070 PF00578 AhpC/TSA family D1107_07075 PF17876 Cold shock domain D1107_07075 PF08461 Ribonuclease R winged-helix domain D1107_07075 PF00773 RNB domain D1107_07075 PF00575 S1 RNA binding domain D1107_07075 PF08206 Ribonuclease B OB domain D1107_07085 PF01479 S4 domain D1107_07085 PF00579 tRNA synthetases class I (W and Y) D1107_07095 PF03144 Elongation factor Tu domain 2 D1107_07095 PF03143 Elongation factor Tu C-terminal domain D1107_07095 PF00009 Elongation factor Tu GTP binding domain D1107_07100 PF00679 Elongation factor G C-terminus D1107_07100 PF03764 Elongation factor G, domain IV D1107_07100 PF00009 Elongation factor Tu GTP binding domain D1107_07100 PF03144 Elongation factor Tu domain 2 D1107_07100 PF14492 Elongation Factor G, domain II D1107_07105 PF00177 Ribosomal protein S7p/S5e D1107_07110 PF00164 Ribosomal protein S12/S23 D1107_07115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1107_07120 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1107_07130 PF08525 Opacity-associated protein A N-terminal motif D1107_07130 PF04225 Opacity-associated protein A LysM-like domain D1107_07140 PF02666 Phosphatidylserine decarboxylase D1107_07145 PF08463 EcoEI R protein C-terminal D1107_07145 PF00271 Helicase conserved C-terminal domain D1107_07145 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1107_07145 PF04851 Type III restriction enzyme, res subunit D1107_07150 PF02384 N-6 DNA Methylase D1107_07150 PF12161 HsdM N-terminal domain D1107_07160 PF01420 Type I restriction modification DNA specificity domain D1107_07165 PF02899 Phage integrase, N-terminal SAM-like domain D1107_07165 PF00589 Phage integrase family D1107_07175 PF04262 Glutamate-cysteine ligase D1107_07175 PF18419 ATP-grasp-like domain D1107_07175 PF02655 ATP-grasp domain D1107_07185 PF03222 Tryptophan/tyrosine permease family D1107_07190 PF04175 Protein of unknown function (DUF406) D1107_07195 PF00248 Aldo/keto reductase family D1107_07200 PF00501 AMP-binding enzyme D1107_07205 PF06039 Malate:quinone oxidoreductase (Mqo) D1107_07225 PF02653 Branched-chain amino acid transport system / permease component D1107_07230 PF00005 ABC transporter D1107_07235 PF13407 Periplasmic binding protein domain D1107_07240 PF00691 OmpA family D1107_07240 PF01389 OmpA-like transmembrane domain D1107_07245 PF02913 FAD linked oxidases, C-terminal domain D1107_07245 PF01565 FAD binding domain D1107_07245 PF13183 4Fe-4S dicluster domain D1107_07250 PF03061 Thioesterase superfamily D1107_07255 PF14849 YidC periplasmic domain D1107_07255 PF02096 60Kd inner membrane protein D1107_07260 PF03264 NapC/NirT cytochrome c family, N-terminal region D1107_07265 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D1107_07270 PF12837 4Fe-4S binding domain D1107_07270 PF12801 4Fe-4S binding domain D1107_07275 PF12838 4Fe-4S dicluster domain D1107_07275 PF12800 4Fe-4S binding domain D1107_07280 PF01568 Molydopterin dinucleotide binding domain D1107_07280 PF00384 Molybdopterin oxidoreductase D1107_07280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1107_07280 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1107_07290 PF12838 4Fe-4S dicluster domain D1107_07290 PF13187 4Fe-4S dicluster domain D1107_07295 PF02525 Flavodoxin-like fold D1107_07310 PF10150 Ribonuclease E/G family D1107_07310 PF00575 S1 RNA binding domain D1107_07310 PF12111 Polyribonucleotide phosphorylase C terminal D1107_07320 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D1107_07325 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D1107_07330 PF01297 Zinc-uptake complex component A periplasmic D1107_07345 PF03979 Sigma-70 factor, region 1.1 D1107_07345 PF00140 Sigma-70 factor, region 1.2 D1107_07345 PF04542 Sigma-70 region 2 D1107_07345 PF04539 Sigma-70 region 3 D1107_07345 PF04545 Sigma-70, region 4 D1107_07345 PF04546 Sigma-70, non-essential region D1107_07350 PF08278 DNA primase DnaG DnaB-binding D1107_07350 PF01807 CHC2 zinc finger D1107_07350 PF10410 DnaB-helicase binding domain of primase D1107_07350 PF08275 DNA primase catalytic core, N-terminal domain D1107_07355 PF01165 Ribosomal protein S21 D1107_07360 PF16363 GDP-mannose 4,6 dehydratase D1107_07365 PF02397 Bacterial sugar transferase D1107_07385 PF03275 UDP-galactopyranose mutase D1107_07400 PF00535 Glycosyl transferase family 2 D1107_07410 PF00005 ABC transporter D1107_07415 PF01061 ABC-2 type transporter D1107_07420 PF01521 Iron-sulphur cluster biosynthesis D1107_07435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1107_07435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1107_07440 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1107_07445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1107_07445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1107_07445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1107_07445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1107_07450 PF00585 C-terminal regulatory domain of Threonine dehydratase D1107_07450 PF00291 Pyridoxal-phosphate dependent enzyme D1107_07455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1107_07460 PF00230 Major intrinsic protein D1107_07470 PF18389 TrmO C-terminal domain D1107_07470 PF01980 tRNA-methyltransferase O D1107_07480 PF01040 UbiA prenyltransferase family D1107_07500 PF00291 Pyridoxal-phosphate dependent enzyme D1107_07500 PF14821 Threonine synthase N terminus D1107_07505 PF02142 MGS-like domain D1107_07510 PF12805 FUSC-like inner membrane protein yccS D1107_07525 PF00210 Ferritin-like domain D1107_07530 PF17954 Quercetinase C-terminal cupin domain D1107_07530 PF02678 Pirin D1107_07540 PF05167 Uncharacterised ACR (DUF711) D1107_07545 PF10396 GTP-binding protein TrmE N-terminus D1107_07545 PF12631 MnmE helical domain D1107_07545 PF01926 50S ribosome-binding GTPase D1107_07550 PF08534 Redoxin D1107_07555 PF01553 Acyltransferase D1107_07560 PF07731 Multicopper oxidase D1107_07560 PF07732 Multicopper oxidase D1107_07565 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1107_07575 PF08543 Phosphomethylpyrimidine kinase D1107_07595 PF00133 tRNA synthetases class I (I, L, M and V) D1107_07595 PF10458 Valyl tRNA synthetase tRNA binding arm D1107_07595 PF08264 Anticodon-binding domain of tRNA D1107_07605 PF13673 Acetyltransferase (GNAT) domain D1107_07610 PF04364 DNA polymerase III chi subunit, HolC D1107_07615 PF01476 LysM domain D1107_07620 PF05698 Bacterial trigger factor protein (TF) C-terminus D1107_07620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1107_07620 PF05697 Bacterial trigger factor protein (TF) D1107_07625 PF00581 Rhodanese-like domain D1107_07630 PF02556 Preprotein translocase subunit SecB D1107_07635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1107_07635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1107_07640 PF00132 Bacterial transferase hexapeptide (six repeats) D1107_07640 PF06426 Serine acetyltransferase, N-terminal D1107_07645 PF03143 Elongation factor Tu C-terminal domain D1107_07645 PF03144 Elongation factor Tu domain 2 D1107_07645 PF00009 Elongation factor Tu GTP binding domain D1107_07670 PF00485 Phosphoribulokinase / Uridine kinase family D1107_07675 PF08534 Redoxin D1107_07680 PF03918 Cytochrome C biogenesis protein D1107_07685 PF03918 Cytochrome C biogenesis protein D1107_07690 PF00994 Probable molybdopterin binding domain D1107_07695 PF00543 Nitrogen regulatory protein P-II D1107_07700 PF01252 Signal peptidase (SPase) II D1107_07705 PF02401 LytB protein D1107_07710 PF03937 Flavinator of succinate dehydrogenase D1107_07720 PF04055 Radical SAM superfamily D1107_07725 PF02798 Glutathione S-transferase, N-terminal domain D1107_07725 PF00043 Glutathione S-transferase, C-terminal domain D1107_07730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1107_07730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1107_07740 PF02313 Fumarate reductase subunit D D1107_07745 PF02300 Fumarate reductase subunit C D1107_07750 PF13183 4Fe-4S dicluster domain D1107_07750 PF13085 2Fe-2S iron-sulfur cluster binding domain D1107_07755 PF00890 FAD binding domain D1107_07755 PF02910 Fumarate reductase flavoprotein C-term D1107_07760 PF00152 tRNA synthetases class II (D, K and N) D1107_07765 PF01678 Diaminopimelate epimerase D1107_07770 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1107_07775 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1107_07785 PF03702 Anhydro-N-acetylmuramic acid kinase D1107_07790 PF01380 SIS domain D1107_07810 PF01523 Putative modulator of DNA gyrase D1107_07815 PF11734 TilS substrate C-terminal domain D1107_07815 PF09179 TilS substrate binding domain D1107_07815 PF01171 PP-loop family D1107_07825 PF00589 Phage integrase family D1107_07825 PF02899 Phage integrase, N-terminal SAM-like domain D1107_07880 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1107_07885 PF06899 WzyE protein, O-antigen assembly polymerase D1107_07890 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D1107_07895 PF03063 Prismane/CO dehydrogenase family D1107_07900 PF00111 2Fe-2S iron-sulfur cluster binding domain D1107_07900 PF00175 Oxidoreductase NAD-binding domain D1107_07900 PF00970 Oxidoreductase FAD-binding domain D1107_07905 PF01943 Polysaccharide biosynthesis protein D1107_07910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1107_07920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1107_07920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1107_07920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1107_07925 PF02350 UDP-N-acetylglucosamine 2-epimerase D1107_07935 PF00953 Glycosyl transferase family 4 D1107_07940 PF00202 Aminotransferase class-III D1107_07950 PF03023 Lipid II flippase MurJ D1107_07955 PF01649 Ribosomal protein S20 D1107_07960 PF02254 TrkA-N domain D1107_07960 PF02080 TrkA-C domain D1107_07965 PF01029 NusB family D1107_07965 PF01189 16S rRNA methyltransferase RsmB/F D1107_07970 PF09107 Elongation factor SelB, winged helix D1107_07970 PF09106 Elongation factor SelB, winged helix D1107_07970 PF03144 Elongation factor Tu domain 2 D1107_07970 PF00009 Elongation factor Tu GTP binding domain D1107_07975 PF03841 L-seryl-tRNA selenium transferase D1107_07985 PF00258 Flavodoxin D1107_07995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1107_07995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1107_08010 PF07715 TonB-dependent Receptor Plug Domain D1107_08010 PF00593 TonB dependent receptor D1107_08015 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1107_08015 PF17483 C-lobe handle domain of Tf-binding protein B D1107_08015 PF17484 N-Lobe handle Tf-binding protein B D1107_08020 PF02472 Biopolymer transport protein ExbD/TolR D1107_08025 PF01618 MotA/TolQ/ExbB proton channel family D1107_08035 PF03956 Lysine exporter LysO D1107_08100 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D1107_08100 PF00535 Glycosyl transferase family 2 D1107_08105 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D1107_08105 PF00535 Glycosyl transferase family 2 D1107_08110 PF11380 Stealth protein CR2, conserved region 2 D1107_08110 PF17101 Stealth protein CR1, conserved region 1 D1107_08115 PF02563 Polysaccharide biosynthesis/export protein D1107_08125 PF01061 ABC-2 type transporter D1107_08130 PF00005 ABC transporter D1107_08135 PF00005 ABC transporter D1107_08140 PF00551 Formyl transferase D1107_08140 PF02911 Formyl transferase, C-terminal domain D1107_08150 PF09186 Domain of unknown function (DUF1949) D1107_08150 PF01205 Uncharacterized protein family UPF0029 D1107_08155 PF02386 Cation transport protein D1107_08160 PF12724 Flavodoxin domain D1107_08165 PF01741 Large-conductance mechanosensitive channel, MscL D1107_08170 PF04055 Radical SAM superfamily D1107_08175 PF03099 Biotin/lipoate A/B protein ligase family D1107_08180 PF04359 Protein of unknown function (DUF493) D1107_08185 PF00768 D-alanyl-D-alanine carboxypeptidase D1107_08185 PF07943 Penicillin-binding protein 5, C-terminal domain D1107_08190 PF03330 Lytic transglycolase D1107_08195 PF01098 Cell cycle protein D1107_08200 PF00905 Penicillin binding protein transpeptidase domain D1107_08200 PF03717 Penicillin-binding Protein dimerisation domain D1107_08205 PF02590 Predicted SPOUT methyltransferase D1107_08215 PF05190 MutS family domain IV D1107_08215 PF01624 MutS domain I D1107_08215 PF00488 MutS domain V D1107_08215 PF05192 MutS domain III D1107_08215 PF05188 MutS domain II D1107_08220 PF00005 ABC transporter D1107_08225 PF00528 Binding-protein-dependent transport system inner membrane component D1107_08230 PF03313 Serine dehydratase alpha chain D1107_08235 PF04405 Domain of Unknown function (DUF542) D1107_08235 PF01814 Hemerythrin HHE cation binding domain D1107_08240 PF00893 Small Multidrug Resistance protein D1107_08245 PF04175 Protein of unknown function (DUF406) D1107_08260 PF01774 UreD urease accessory protein D1107_08265 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1107_08270 PF01730 UreF D1107_08275 PF02814 UreE urease accessory protein, N-terminal domain D1107_08275 PF05194 UreE urease accessory protein, C-terminal domain D1107_08285 PF01979 Amidohydrolase family D1107_08285 PF00449 Urease alpha-subunit, N-terminal domain D1107_08290 PF00699 Urease beta subunit D1107_08295 PF00547 Urease, gamma subunit D1107_08305 PF00005 ABC transporter D1107_08315 PF01891 Cobalt uptake substrate-specific transmembrane region D1107_08325 PF10670 Domain of unknown function (DUF4198) D1107_08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_08330 PF03466 LysR substrate binding domain D1107_08340 PF03600 Citrate transporter D1107_08340 PF02080 TrkA-C domain D1107_08345 PF05068 Mannitol repressor D1107_08350 PF08125 Mannitol dehydrogenase C-terminal domain D1107_08350 PF01232 Mannitol dehydrogenase Rossmann domain D1107_08355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1107_08355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1107_08355 PF02378 Phosphotransferase system, EIIC D1107_08360 PF01380 SIS domain D1107_08365 PF00455 DeoR C terminal sensor domain D1107_08365 PF08220 DeoR-like helix-turn-helix domain D1107_08380 PF18071 HMW1C N-terminal D1107_08380 PF18254 HMW1 domain 2 D1107_08385 PF04055 Radical SAM superfamily D1107_08385 PF00919 Uncharacterized protein family UPF0004 D1107_08385 PF18693 TRAM domain D1107_08390 PF01048 Phosphorylase superfamily D1107_08400 PF04102 SlyX D1107_08405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1107_08405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1107_08410 PF08348 YheO-like PAS domain D1107_08410 PF13309 HTH domain D1107_08415 PF02635 DsrE/DsrF-like family D1107_08420 PF02635 DsrE/DsrF-like family D1107_08425 PF04077 DsrH like protein D1107_08455 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1107_08460 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1107_08460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1107_08465 PF00231 ATP synthase D1107_08470 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1107_08470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1107_08470 PF00306 ATP synthase alpha/beta chain, C terminal domain D1107_08475 PF00213 ATP synthase delta (OSCP) subunit D1107_08480 PF00430 ATP synthase B/B' CF(0) D1107_08485 PF00137 ATP synthase subunit C D1107_08490 PF00119 ATP synthase A chain D1107_08500 PF02527 rRNA small subunit methyltransferase G D1107_08505 PF01134 Glucose inhibited division protein A D1107_08505 PF13932 GidA associated domain D1107_08515 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1107_08520 PF02810 SEC-C motif D1107_08530 PF03613 PTS system mannose/fructose/sorbose family IID component D1107_08535 PF03609 PTS system sorbose-specific iic component D1107_08540 PF03610 PTS system fructose IIA component D1107_08540 PF03830 PTS system sorbose subfamily IIB component D1107_08545 PF02447 GntP family permease D1107_08550 PF01202 Shikimate kinase D1107_08555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1107_08555 PF00356 Bacterial regulatory proteins, lacI family D1107_08560 PF00356 Bacterial regulatory proteins, lacI family D1107_08565 PF05025 RbsD / FucU transport protein family D1107_08570 PF00005 ABC transporter D1107_08575 PF02653 Branched-chain amino acid transport system / permease component D1107_08580 PF13407 Periplasmic binding protein domain D1107_08585 PF00294 pfkB family carbohydrate kinase D1107_08590 PF01568 Molydopterin dinucleotide binding domain D1107_08590 PF00384 Molybdopterin oxidoreductase D1107_08590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1107_08595 PF13247 4Fe-4S dicluster domain D1107_08595 PF12800 4Fe-4S binding domain D1107_08600 PF04976 DMSO reductase anchor subunit (DmsC) D1107_08605 PF02613 Nitrate reductase delta subunit D1107_08610 PF00037 4Fe-4S binding domain D1107_08610 PF12838 4Fe-4S dicluster domain D1107_08640 PF02769 AIR synthase related protein, C-terminal domain D1107_08640 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1107_08640 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1107_08645 PF08220 DeoR-like helix-turn-helix domain D1107_08645 PF00455 DeoR C terminal sensor domain D1107_08650 PF02952 L-fucose isomerase, C-terminal domain D1107_08650 PF07882 L-fucose isomerase, second N-terminal domain D1107_08650 PF07881 L-fucose isomerase, first N-terminal domain D1107_08655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1107_08655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1107_08660 PF05025 RbsD / FucU transport protein family D1107_08670 PF07690 Major Facilitator Superfamily D1107_08675 PF00465 Iron-containing alcohol dehydrogenase D1107_08680 PF07274 Protein of unknown function (DUF1440) D1107_08685 PF00528 Binding-protein-dependent transport system inner membrane component D1107_08690 PF00528 Binding-protein-dependent transport system inner membrane component D1107_08695 PF00005 ABC transporter D1107_08700 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1107_08710 PF04983 RNA polymerase Rpb1, domain 3 D1107_08710 PF05000 RNA polymerase Rpb1, domain 4 D1107_08710 PF04997 RNA polymerase Rpb1, domain 1 D1107_08710 PF04998 RNA polymerase Rpb1, domain 5 D1107_08710 PF00623 RNA polymerase Rpb1, domain 2 D1107_08715 PF10385 RNA polymerase beta subunit external 1 domain D1107_08715 PF04565 RNA polymerase Rpb2, domain 3 D1107_08715 PF00562 RNA polymerase Rpb2, domain 6 D1107_08715 PF04560 RNA polymerase Rpb2, domain 7 D1107_08715 PF04563 RNA polymerase beta subunit D1107_08715 PF04561 RNA polymerase Rpb2, domain 2 D1107_08750 PF00542 Ribosomal protein L7/L12 C-terminal domain D1107_08750 PF16320 Ribosomal protein L7/L12 dimerisation domain D1107_08755 PF00466 Ribosomal protein L10 D1107_08760 PF00687 Ribosomal protein L1p/L10e family D1107_08765 PF00298 Ribosomal protein L11, RNA binding domain D1107_08765 PF03946 Ribosomal protein L11, N-terminal domain D1107_08770 PF00467 KOW motif D1107_08770 PF02357 Transcription termination factor nusG D1107_08775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1107_08785 PF03611 PTS system sugar-specific permease component D1107_08790 PF03169 OPT oligopeptide transporter protein D1107_08795 PF17782 DprA winged helix domain D1107_08795 PF02481 DNA recombination-mediator protein A D1107_08800 PF01327 Polypeptide deformylase D1107_08805 PF01370 NAD dependent epimerase/dehydratase family D1107_08810 PF04575 Protein of unknown function (DUF560) D1107_08835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1107_08835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1107_08840 PF00596 Class II Aldolase and Adducin N-terminal domain D1107_08845 PF01261 Xylose isomerase-like TIM barrel D1107_08850 PF08220 DeoR-like helix-turn-helix domain D1107_08850 PF00455 DeoR C terminal sensor domain D1107_08860 PF03611 PTS system sugar-specific permease component D1107_08865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1107_08870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1107_08880 PF05159 Capsule polysaccharide biosynthesis protein D1107_08885 PF05159 Capsule polysaccharide biosynthesis protein D1107_08900 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D1107_08905 PF01850 PIN domain D1107_08925 PF00004 ATPase family associated with various cellular activities (AAA) D1107_08925 PF10431 C-terminal, D2-small domain, of ClpB protein D1107_08925 PF07724 AAA domain (Cdc48 subfamily) D1107_08930 PF00227 Proteasome subunit D1107_08935 PF03749 Sugar fermentation stimulation protein RE domain D1107_08935 PF17746 SfsA N-terminal OB domain D1107_08940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1107_08945 PF00730 HhH-GPD superfamily base excision DNA repair protein D1107_08945 PF14815 NUDIX domain D1107_08950 PF04362 Bacterial Fe(2+) trafficking D1107_08955 PF01464 Transglycosylase SLT domain D1107_08955 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1107_08985 PF00772 DnaB-like helicase N terminal domain D1107_08985 PF03796 DnaB-like helicase C terminal domain D1107_08995 PF00589 Phage integrase family D1107_08995 PF02899 Phage integrase, N-terminal SAM-like domain D1107_09020 PF00005 ABC transporter D1107_09020 PF00664 ABC transporter transmembrane region D1107_09020 PF03412 Peptidase C39 family D1107_09025 PF00529 HlyD membrane-fusion protein of T1SS D1107_09025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1107_09040 PF00448 SRP54-type protein, GTPase domain D1107_09040 PF02881 SRP54-type protein, helical bundle domain D1107_09040 PF02978 Signal peptide binding domain D1107_09045 PF00149 Calcineurin-like phosphoesterase D1107_09045 PF02872 5'-nucleotidase, C-terminal domain D1107_09050 PF01494 FAD binding domain D1107_09055 PF01078 Magnesium chelatase, subunit ChlI D1107_09055 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1107_09065 PF00561 alpha/beta hydrolase fold D1107_09070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1107_09070 PF16582 Middle domain of thiamine pyrophosphate D1107_09070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1107_09075 PF13472 GDSL-like Lipase/Acylhydrolase family D1107_09075 PF02348 Cytidylyltransferase D1107_09080 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D1107_09085 PF00480 ROK family D1107_09090 PF00701 Dihydrodipicolinate synthetase family D1107_09095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1107_09100 PF01979 Amidohydrolase family D1107_09105 PF10415 Fumarase C C-terminus D1107_09105 PF00206 Lyase D1107_09115 PF00338 Ribosomal protein S10p/S20e D1107_09120 PF00297 Ribosomal protein L3 D1107_09125 PF00573 Ribosomal protein L4/L1 family D1107_09130 PF00276 Ribosomal protein L23 D1107_09135 PF00181 Ribosomal Proteins L2, RNA binding domain D1107_09135 PF03947 Ribosomal Proteins L2, C-terminal domain D1107_09140 PF00203 Ribosomal protein S19 D1107_09145 PF00237 Ribosomal protein L22p/L17e D1107_09150 PF00189 Ribosomal protein S3, C-terminal domain D1107_09150 PF07650 KH domain D1107_09155 PF00252 Ribosomal protein L16p/L10e D1107_09160 PF00831 Ribosomal L29 protein D1107_09165 PF00366 Ribosomal protein S17 D1107_09170 PF00238 Ribosomal protein L14p/L23e D1107_09175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1107_09175 PF00467 KOW motif D1107_09180 PF00281 Ribosomal protein L5 D1107_09180 PF00673 ribosomal L5P family C-terminus D1107_09185 PF00253 Ribosomal protein S14p/S29e D1107_09190 PF00410 Ribosomal protein S8 D1107_09195 PF00347 Ribosomal protein L6 D1107_09200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1107_09205 PF00333 Ribosomal protein S5, N-terminal domain D1107_09205 PF03719 Ribosomal protein S5, C-terminal domain D1107_09210 PF00327 Ribosomal protein L30p/L7e D1107_09215 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1107_09220 PF00344 SecY translocase D1107_09225 PF00444 Ribosomal protein L36 D1107_09230 PF00416 Ribosomal protein S13/S18 D1107_09235 PF00411 Ribosomal protein S11 D1107_09240 PF00163 Ribosomal protein S4/S9 N-terminal domain D1107_09240 PF01479 S4 domain D1107_09245 PF01000 RNA polymerase Rpb3/RpoA insert domain D1107_09245 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1107_09245 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1107_09250 PF01196 Ribosomal protein L17 D1107_09255 PF00886 Ribosomal protein S16 D1107_09260 PF05239 PRC-barrel domain D1107_09260 PF01782 RimM N-terminal domain D1107_09265 PF01746 tRNA (Guanine-1)-methyltransferase D1107_09270 PF01245 Ribosomal protein L19 D1107_09275 PF08007 Cupin superfamily protein D1107_09280 PF01497 Periplasmic binding protein D1107_09285 PF01032 FecCD transport family D1107_09290 PF00005 ABC transporter D1107_09295 PF00127 Copper binding proteins, plastocyanin/azurin family D1107_09310 PF02613 Nitrate reductase delta subunit D1107_09315 PF01568 Molydopterin dinucleotide binding domain D1107_09315 PF18364 Molybdopterin oxidoreductase N-terminal domain D1107_09315 PF00384 Molybdopterin oxidoreductase D1107_09325 PF02091 Glycyl-tRNA synthetase alpha subunit D1107_09330 PF04480 Protein of unknown function (DUF559) D1107_09340 PF05746 DALR anticodon binding domain D1107_09340 PF02092 Glycyl-tRNA synthetase beta subunit D1107_09345 PF17347 Family of unknown function (DUF5377) D1107_09350 PF00589 Phage integrase family D1107_09350 PF02899 Phage integrase, N-terminal SAM-like domain D1107_09355 PF04304 Protein of unknown function (DUF454) D1107_09365 PF00149 Calcineurin-like phosphoesterase D1107_09370 PF07509 Protein of unknown function (DUF1523) D1107_09375 PF01026 TatD related DNase D1107_09390 PF00005 ABC transporter D1107_09390 PF02687 FtsX-like permease family D1107_09390 PF12704 MacB-like periplasmic core domain D1107_09395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1107_09400 PF06629 MltA-interacting protein MipA D1107_09405 PF09115 DNA polymerase III, delta subunit, C terminal D1107_09410 PF02223 Thymidylate kinase D1107_09415 PF02618 YceG-like family D1107_09435 PF00550 Phosphopantetheine attachment site D1107_09440 PF00834 Ribulose-phosphate 3 epimerase family D1107_09445 PF01197 Ribosomal protein L31 D1107_09450 PF00444 Ribosomal protein L36 D1107_09455 PF00912 Transglycosylase D1107_09455 PF00905 Penicillin binding protein transpeptidase domain D1107_09455 PF14814 Bifunctional transglycosylase second domain D1107_09460 PF00378 Enoyl-CoA hydratase/isomerase D1107_09465 PF04607 Region found in RelA / SpoT proteins D1107_09465 PF13291 ACT domain D1107_09465 PF02824 TGS domain D1107_09470 PF01192 RNA polymerase Rpb6 D1107_09475 PF00270 DEAD/DEAH box helicase D1107_09475 PF00271 Helicase conserved C-terminal domain D1107_09475 PF17191 RecG wedge domain D1107_09490 PF04073 Aminoacyl-tRNA editing domain D1107_09490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1107_09490 PF03129 Anticodon binding domain D1107_09500 PF04542 Sigma-70 region 2 D1107_09500 PF08281 Sigma-70, region 4 D1107_09505 PF00174 Oxidoreductase molybdopterin binding domain D1107_09510 PF01794 Ferric reductase like transmembrane component D1107_09515 PF00140 Sigma-70 factor, region 1.2 D1107_09515 PF04542 Sigma-70 region 2 D1107_09515 PF04545 Sigma-70, region 4 D1107_09520 PF07690 Major Facilitator Superfamily D1107_09540 PF03590 Aspartate-ammonia ligase D1107_09545 PF01037 Lrp/AsnC ligand binding domain D1107_09545 PF13404 AsnC-type helix-turn-helix domain D1107_09550 PF01048 Phosphorylase superfamily D1107_09555 PF04345 Chorismate lyase D1107_09560 PF01177 Asp/Glu/Hydantoin racemase D1107_09590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1107_09590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1107_09595 PF00667 FAD binding domain D1107_09595 PF00258 Flavodoxin D1107_09595 PF00175 Oxidoreductase NAD-binding domain D1107_09600 PF00009 Elongation factor Tu GTP binding domain D1107_09605 PF01507 Phosphoadenosine phosphosulfate reductase family D1107_09610 PF01507 Phosphoadenosine phosphosulfate reductase family D1107_09615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1107_09615 PF10414 Sirohaem synthase dimerisation region D1107_09615 PF14824 Sirohaem biosynthesis protein central D1107_09625 PF00528 Binding-protein-dependent transport system inner membrane component D1107_09630 PF00528 Binding-protein-dependent transport system inner membrane component D1107_09635 PF00005 ABC transporter D1107_09635 PF17850 CysA C-terminal regulatory domain D1107_09635 PF12857 TOBE-like domain D1107_09640 PF01070 FMN-dependent dehydrogenase D1107_09645 PF08279 HTH domain D1107_09645 PF03099 Biotin/lipoate A/B protein ligase family D1107_09645 PF02237 Biotin protein ligase C terminal domain D1107_09650 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1107_09650 PF01565 FAD binding domain D1107_09655 PF00691 OmpA family D1107_09655 PF01389 OmpA-like transmembrane domain D1107_09660 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1107_09660 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1107_09665 PF04403 Paraquat-inducible protein A D1107_09670 PF01841 Transglutaminase-like superfamily D1107_09680 PF00403 Heavy-metal-associated domain D1107_09685 PF00465 Iron-containing alcohol dehydrogenase D1107_09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1107_09690 PF03466 LysR substrate binding domain D1107_09695 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1107_09695 PF00132 Bacterial transferase hexapeptide (six repeats) D1107_09695 PF14602 Hexapeptide repeat of succinyl-transferase D1107_09700 PF01220 Dehydroquinase class II D1107_09705 PF04488 Glycosyltransferase sugar-binding region containing DXD motif D1107_09710 PF00364 Biotin-requiring enzyme D1107_09715 PF02785 Biotin carboxylase C-terminal domain D1107_09715 PF00289 Biotin carboxylase, N-terminal domain D1107_09715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1107_09720 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D1107_09725 PF06288 Protein of unknown function (DUF1040) D1107_09730 PF01323 DSBA-like thioredoxin domain D1107_09735 PF05036 Sporulation related domain D1107_09735 PF05036 Sporulation related domain D1107_09740 PF04445 Putative SAM-dependent methyltransferase D1107_09745 PF02557 D-alanyl-D-alanine carboxypeptidase D1107_09750 PF07687 Peptidase dimerisation domain D1107_09750 PF01546 Peptidase family M20/M25/M40 D1107_09755 PF03960 ArsC family D1107_09765 PF00809 Pterin binding enzyme D1107_09770 PF00849 RNA pseudouridylate synthase D1107_09770 PF01479 S4 domain D1107_09780 PF00924 Mechanosensitive ion channel D1107_09780 PF05552 Conserved TM helix D1107_09785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1107_09785 PF02785 Biotin carboxylase C-terminal domain D1107_09785 PF00289 Biotin carboxylase, N-terminal domain D1107_09795 PF00675 Insulinase (Peptidase family M16) D1107_09795 PF05193 Peptidase M16 inactive domain D1107_09795 PF16187 Middle or third domain of peptidase_M16 D1107_09800 PF17946 RecC C-terminal domain D1107_09825 PF07977 FabA-like domain D1107_09830 PF13654 AAA domain D1107_09830 PF05362 Lon protease (S16) C-terminal proteolytic domain D1107_09835 PF06303 MatP N-terminal domain D1107_09835 PF17414 MatP C-terminal ribbon-helix-helix domain D1107_09840 PF00579 tRNA synthetases class I (W and Y) D1107_09845 PF13419 Haloacid dehalogenase-like hydrolase D1107_09855 PF01790 Prolipoprotein diacylglyceryl transferase D1107_09860 PF01925 Sulfite exporter TauE/SafE D1107_09865 PF00293 NUDIX domain D1107_09875 PF00719 Inorganic pyrophosphatase D1107_09880 PF05175 Methyltransferase small domain D1107_09885 PF03737 Aldolase/RraA D1107_09890 PF01226 Formate/nitrite transporter D1107_09910 PF00226 DnaJ domain D1107_09910 PF01556 DnaJ C terminal domain D1107_09910 PF00684 DnaJ central domain D1107_09915 PF00012 Hsp70 protein D1107_09920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1107_09920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1107_09930 PF13407 Periplasmic binding protein domain D1107_09935 PF00005 ABC transporter D1107_09940 PF02653 Branched-chain amino acid transport system / permease component D1107_09945 PF12833 Helix-turn-helix domain D1107_09950 PF01431 Peptidase family M13 D1107_09950 PF05649 Peptidase family M13 D1107_09955 PF10571 Uncharacterised protein family UPF0547 D1107_09960 PF00474 Sodium:solute symporter family D1107_09965 PF06196 Protein of unknown function (DUF997) D1107_09970 PF01340 Met Apo-repressor, MetJ D1107_09975 PF04333 MlaA lipoprotein D1107_09980 PF01263 Aldose 1-epimerase D1107_09995 PF14883 Hypothetical glycosyl hydrolase family 13 D1107_09995 PF01522 Polysaccharide deacetylase D1107_10000 PF00535 Glycosyl transferase family 2 D1107_10010 PF00121 Triosephosphate isomerase D1107_10015 PF01142 tRNA pseudouridine synthase D (TruD) D1107_10020 PF01975 Survival protein SurE D1107_10025 PF09335 SNARE associated Golgi protein D1107_10040 PF01551 Peptidase family M23 D1107_10040 PF01476 LysM domain D1107_10045 PF03352 Methyladenine glycosylase D1107_10055 PF07670 Nucleoside recognition D1107_10060 PF07670 Nucleoside recognition D1107_10065 PF00762 Ferrochelatase D1107_10070 PF00468 Ribosomal protein L34 D1107_10075 PF00825 Ribonuclease P D1107_10080 PF01809 Putative membrane protein insertion efficiency factor D1107_10085 PF00120 Glutamine synthetase, catalytic domain D1107_10085 PF03951 Glutamine synthetase, beta-Grasp domain D1107_10090 PF00149 Calcineurin-like phosphoesterase D1107_10095 PF00293 NUDIX domain D1107_10100 PF06146 Phosphate-starvation-inducible E D1107_10105 PF01648 4'-phosphopantetheinyl transferase superfamily D1107_10110 PF00892 EamA-like transporter family D1107_10115 PF06965 Na+/H+ antiporter 1 D1107_10125 PF02580 D-Tyr-tRNA(Tyr) deacylase D1107_10130 PF03631 Virulence factor BrkB D1107_10135 PF00171 Aldehyde dehydrogenase family D1107_10155 PF01119 DNA mismatch repair protein, C-terminal domain D1107_10155 PF08676 MutL C terminal dimerisation domain D1107_10160 PF08240 Alcohol dehydrogenase GroES-like domain D1107_10160 PF00107 Zinc-binding dehydrogenase D1107_10170 PF17209 Hfq protein D1107_10175 PF16360 GTP-binding GTPase Middle Region D1107_10175 PF13167 GTP-binding GTPase N-terminal D1107_10175 PF01926 50S ribosome-binding GTPase D1107_10180 PF03641 Possible lysine decarboxylase D1107_10190 PF00027 Cyclic nucleotide-binding domain D1107_10190 PF13545 Crp-like helix-turn-helix domain D1107_10195 PF06794 Uncharacterised protein family (UPF0270) D1107_10200 PF00440 Bacterial regulatory proteins, tetR family D1107_10205 PF00692 dUTPase D1107_10210 PF04127 DNA / pantothenate metabolism flavoprotein D1107_10210 PF02441 Flavoprotein D1107_10215 PF04002 RadC-like JAB domain D1107_10220 PF00830 Ribosomal L28 family D1107_10225 PF00471 Ribosomal protein L33 D1107_10240 PF00202 Aminotransferase class-III D1107_10245 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1107_10250 PF01206 Sulfurtransferase TusA D1107_10255 PF04143 Sulphur transport D1107_10260 PF04219 Protein of unknown function, DUF D1107_10265 PF05958 tRNA (Uracil-5-)-methyltransferase D1107_10280 PF01544 CorA-like Mg2+ transporter protein D1107_10285 PF01209 ubiE/COQ5 methyltransferase family D1107_10295 PF03109 ABC1 family D1107_10300 PF02416 mttA/Hcf106 family D1107_10310 PF00902 Sec-independent protein translocase protein (TatC) D1107_10315 PF00490 Delta-aminolevulinic acid dehydratase D1107_10325 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1107_10325 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1107_10325 PF06827 Zinc finger found in FPG and IleRS D1107_10330 PF05525 Branched-chain amino acid transport protein D1107_10340 PF00698 Acyl transferase domain D1107_10345 PF02677 Epoxyqueuosine reductase QueH D1107_10350 PF00348 Polyprenyl synthetase D1107_10360 PF03358 NADPH-dependent FMN reductase D1107_10365 PF07681 DoxX D1107_10370 PF00829 Ribosomal prokaryotic L21 protein D1107_10375 PF01016 Ribosomal L27 protein D1107_10380 PF00892 EamA-like transporter family D1107_10385 PF04575 Protein of unknown function (DUF560) D1107_10390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1107_10395 PF00156 Phosphoribosyl transferase domain D1107_10400 PF08468 Methyltransferase small domain N-terminal D1107_10400 PF05175 Methyltransferase small domain D1107_10410 PF00583 Acetyltransferase (GNAT) family D1107_10415 PF00271 Helicase conserved C-terminal domain D1107_10415 PF00270 DEAD/DEAH box helicase D1107_10420 PF01243 Pyridoxamine 5'-phosphate oxidase D1107_10420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1107_10425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1107_10430 PF00171 Aldehyde dehydrogenase family D1107_10435 PF01184 GPR1/FUN34/yaaH family D1107_10440 PF00005 ABC transporter D1107_10450 PF01032 FecCD transport family D1107_10455 PF07715 TonB-dependent Receptor Plug Domain D1107_10455 PF00593 TonB dependent receptor D1107_10465 PF01259 SAICAR synthetase D1107_10470 PF01634 ATP phosphoribosyltransferase D1107_10470 PF08029 HisG, C-terminal domain D1107_10475 PF00815 Histidinol dehydrogenase D1107_10480 PF00155 Aminotransferase class I and II D1107_10485 PF01797 Transposase IS200 like D1107_10490 PF00475 Imidazoleglycerol-phosphate dehydratase D1107_10500 PF00117 Glutamine amidotransferase class-I D1107_10505 PF00977 Histidine biosynthesis protein D1107_10510 PF00977 Histidine biosynthesis protein D1107_10515 PF01502 Phosphoribosyl-AMP cyclohydrolase D1107_10515 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1107_10520 PF02592 Putative vitamin uptake transporter D1107_10525 PF00557 Metallopeptidase family M24 D1107_10535 PF00356 Bacterial regulatory proteins, lacI family D1107_10535 PF13407 Periplasmic binding protein domain D1107_10540 PF08244 Glycosyl hydrolases family 32 C terminal D1107_10540 PF00251 Glycosyl hydrolases family 32 N-terminal domain D1107_10545 PF00294 pfkB family carbohydrate kinase D1107_10550 PF07732 Multicopper oxidase D1107_10555 PF02687 FtsX-like permease family D1107_10555 PF12704 MacB-like periplasmic core domain D1107_10560 PF00005 ABC transporter D1107_10565 PF12704 MacB-like periplasmic core domain D1107_10565 PF02687 FtsX-like permease family D1107_10570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1107_10570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1107_10575 PF00793 DAHP synthetase I family D1107_10580 PF13369 Transglutaminase-like superfamily D1107_10585 PF13847 Methyltransferase domain D1107_10585 PF17827 PrmC N-terminal domain D1107_10595 PF03462 PCRF domain D1107_10595 PF00472 RF-1 domain