locus-tag class description D1105_00005 PF00308 Bacterial dnaA protein D1105_00005 PF08299 Bacterial dnaA protein helix-turn-helix D1105_00005 PF11638 DnaA N-terminal domain D1105_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1105_00010 PF02767 DNA polymerase III beta subunit, central domain D1105_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1105_00015 PF02463 RecF/RecN/SMC N terminal domain D1105_00020 PF00080 Copper/zinc superoxide dismutase (SODC) D1105_00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1105_00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1105_00035 PF02684 Lipid-A-disaccharide synthetase D1105_00040 PF01343 Peptidase family S49 D1105_00040 PF08496 Peptidase family S49 N-terminal D1105_00045 PF02381 MraZ protein, putative antitoxin-like D1105_00050 PF01795 MraW methylase family D1105_00055 PF04999 Cell division protein FtsL D1105_00060 PF00905 Penicillin binding protein transpeptidase domain D1105_00060 PF03717 Penicillin-binding Protein dimerisation domain D1105_00065 PF01225 Mur ligase family, catalytic domain D1105_00065 PF02875 Mur ligase family, glutamate ligase domain D1105_00065 PF08245 Mur ligase middle domain D1105_00070 PF01225 Mur ligase family, catalytic domain D1105_00070 PF02875 Mur ligase family, glutamate ligase domain D1105_00070 PF08245 Mur ligase middle domain D1105_00075 PF00953 Glycosyl transferase family 4 D1105_00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1105_00080 PF02875 Mur ligase family, glutamate ligase domain D1105_00080 PF08245 Mur ligase middle domain D1105_00085 PF01098 Cell cycle protein D1105_00090 PF04101 Glycosyltransferase family 28 C-terminal domain D1105_00090 PF03033 Glycosyltransferase family 28 N-terminal domain D1105_00095 PF01225 Mur ligase family, catalytic domain D1105_00095 PF02875 Mur ligase family, glutamate ligase domain D1105_00095 PF08245 Mur ligase middle domain D1105_00100 PF01820 D-ala D-ala ligase N-terminus D1105_00100 PF07478 D-ala D-ala ligase C-terminus D1105_00105 PF03799 Cell division protein FtsQ D1105_00105 PF08478 POTRA domain, FtsQ-type D1105_00110 PF02491 SHS2 domain inserted in FTSA D1105_00115 PF12327 FtsZ family, C-terminal domain D1105_00115 PF00091 Tubulin/FtsZ family, GTPase domain D1105_00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1105_00125 PF02463 RecF/RecN/SMC N terminal domain D1105_00135 PF00005 ABC transporter D1105_00135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1105_00140 PF00528 Binding-protein-dependent transport system inner membrane component D1105_00140 PF12911 N-terminal TM domain of oligopeptide transport permease C D1105_00145 PF00528 Binding-protein-dependent transport system inner membrane component D1105_00150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1105_00155 PF16658 Class II release factor RF3, C-terminal domain D1105_00155 PF03144 Elongation factor Tu domain 2 D1105_00155 PF00009 Elongation factor Tu GTP binding domain D1105_00170 PF01195 Peptidyl-tRNA hydrolase D1105_00175 PF01926 50S ribosome-binding GTPase D1105_00175 PF06071 Protein of unknown function (DUF933) D1105_00190 PF05433 Glycine zipper 2TM domain D1105_00195 PF06185 YecM protein D1105_00200 PF03485 Arginyl tRNA synthetase N terminal domain D1105_00200 PF05746 DALR anticodon binding domain D1105_00200 PF00750 tRNA synthetases class I (R) D1105_00205 PF01018 GTP1/OBG D1105_00205 PF01926 50S ribosome-binding GTPase D1105_00210 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) D1105_00215 PF00588 SpoU rRNA Methylase family D1105_00215 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1105_00220 PF13091 PLD-like domain D1105_00225 PF08264 Anticodon-binding domain of tRNA D1105_00225 PF00133 tRNA synthetases class I (I, L, M and V) D1105_00225 PF06827 Zinc finger found in FPG and IleRS D1105_00230 PF01687 Riboflavin kinase D1105_00230 PF06574 FAD synthetase D1105_00235 PF01467 Cytidylyltransferase-like D1105_00235 PF13521 AAA domain D1105_00240 PF00149 Calcineurin-like phosphoesterase D1105_00245 PF00072 Response regulator receiver domain D1105_00245 PF00486 Transcriptional regulatory protein, C terminal D1105_00260 PF01168 Alanine racemase, N-terminal domain D1105_00270 PF00679 Elongation factor G C-terminus D1105_00270 PF00009 Elongation factor Tu GTP binding domain D1105_00270 PF03144 Elongation factor Tu domain 2 D1105_00275 PF00462 Glutaredoxin D1105_00280 PF03725 3' exoribonuclease family, domain 2 D1105_00280 PF01138 3' exoribonuclease family, domain 1 D1105_00285 PF08340 Domain of unknown function (DUF1732) D1105_00285 PF03755 YicC-like family, N-terminal region D1105_00290 PF01571 Aminomethyltransferase folate-binding domain D1105_00295 PF00037 4Fe-4S binding domain D1105_00300 PF00196 Bacterial regulatory proteins, luxR family D1105_00300 PF00072 Response regulator receiver domain D1105_00305 PF10672 S-adenosylmethionine-dependent methyltransferase D1105_00305 PF02926 THUMP domain D1105_00305 PF01170 Putative RNA methylase family UPF0020 D1105_00310 PF00588 SpoU rRNA Methylase family D1105_00315 PF00923 Transaldolase/Fructose-6-phosphate aldolase D1105_00350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1105_00355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1105_00360 PF00528 Binding-protein-dependent transport system inner membrane component D1105_00365 PF12911 N-terminal TM domain of oligopeptide transport permease C D1105_00365 PF00528 Binding-protein-dependent transport system inner membrane component D1105_00370 PF00005 ABC transporter D1105_00370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1105_00375 PF13391 HNH endonuclease D1105_00380 PF00005 ABC transporter D1105_00380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1105_00385 PF06146 Phosphate-starvation-inducible E D1105_00395 PF01042 Endoribonuclease L-PSP D1105_00400 PF01063 Amino-transferase class IV D1105_00405 PF00462 Glutaredoxin D1105_00410 PF13662 Toprim domain D1105_00410 PF02132 RecR protein D1105_00415 PF02575 YbaB/EbfC DNA-binding family D1105_00420 PF03544 Gram-negative bacterial TonB protein C-terminal D1105_00425 PF02472 Biopolymer transport protein ExbD/TolR D1105_00430 PF01618 MotA/TolQ/ExbB proton channel family D1105_00435 PF00581 Rhodanese-like domain D1105_00445 PF03610 PTS system fructose IIA component D1105_00445 PF05524 PEP-utilising enzyme, N-terminal D1105_00445 PF00391 PEP-utilising enzyme, mobile domain D1105_00445 PF00381 PTS HPr component phosphorylation site D1105_00450 PF02734 DAK2 domain D1105_00455 PF02733 Dak1 domain D1105_00460 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1105_00465 PF02348 Cytidylyltransferase D1105_00470 PF06078 Bacterial protein of unknown function (DUF937) D1105_00475 PF09297 NADH pyrophosphatase zinc ribbon domain D1105_00475 PF00293 NUDIX domain D1105_00480 PF00849 RNA pseudouridylate synthase D1105_00490 PF04186 FxsA cytoplasmic membrane protein D1105_00495 PF00557 Metallopeptidase family M24 D1105_00500 PF01206 Sulfurtransferase TusA D1105_00505 PF06877 Regulator of ribonuclease activity B D1105_00510 PF01926 50S ribosome-binding GTPase D1105_00520 PF02535 ZIP Zinc transporter D1105_00525 PF00920 Dehydratase family D1105_00535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1105_00535 PF00205 Thiamine pyrophosphate enzyme, central domain D1105_00535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1105_00540 PF02335 Cytochrome c552 D1105_00550 PF13247 4Fe-4S dicluster domain D1105_00555 PF03916 Polysulphide reductase, NrfD D1105_00560 PF05662 Coiled stalk of trimeric autotransporter adhesin D1105_00560 PF13018 Extended Signal Peptide of Type V secretion system D1105_00560 PF03895 YadA-like membrane anchor domain D1105_00560 PF05658 Head domain of trimeric autotransporter adhesin D1105_00560 PF05662 Coiled stalk of trimeric autotransporter adhesin D1105_00560 PF03895 YadA-like membrane anchor domain D1105_00560 PF13018 Extended Signal Peptide of Type V secretion system D1105_00560 PF05658 Head domain of trimeric autotransporter adhesin D1105_00560 PF05658 Head domain of trimeric autotransporter adhesin D1105_00560 PF03895 YadA-like membrane anchor domain D1105_00560 PF05662 Coiled stalk of trimeric autotransporter adhesin D1105_00560 PF13018 Extended Signal Peptide of Type V secretion system D1105_00560 PF05662 Coiled stalk of trimeric autotransporter adhesin D1105_00560 PF05658 Head domain of trimeric autotransporter adhesin D1105_00560 PF03895 YadA-like membrane anchor domain D1105_00560 PF13018 Extended Signal Peptide of Type V secretion system D1105_00565 PF00860 Permease family D1105_00570 PF00171 Aldehyde dehydrogenase family D1105_00570 PF01619 Proline dehydrogenase D1105_00570 PF14850 DNA-binding domain of Proline dehydrogenase D1105_00570 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D1105_00575 PF00474 Sodium:solute symporter family D1105_00580 PF09339 IclR helix-turn-helix domain D1105_00580 PF01614 Bacterial transcriptional regulator D1105_00585 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1105_00595 PF05164 Cell division protein ZapA D1105_00600 PF03695 Uncharacterised protein family (UPF0149) D1105_00605 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1105_00610 PF04222 Protein of unknown function (DUF416) D1105_00615 PF00216 Bacterial DNA-binding protein D1105_00620 PF00303 Thymidylate synthase D1105_00630 PF06968 Biotin and Thiamin Synthesis associated domain D1105_00630 PF04055 Radical SAM superfamily D1105_00635 PF00313 'Cold-shock' DNA-binding domain D1105_00640 PF04352 ProQ/FINO family D1105_00645 PF17804 Tail specific protease N-terminal domain D1105_00645 PF03572 Peptidase family S41 D1105_00645 PF11818 C-terminal domain of tail specific protease (DUF3340) D1105_00645 PF00595 PDZ domain D1105_00650 PF03734 L,D-transpeptidase catalytic domain D1105_00655 PF05951 Bacterial protein of unknown function (DUF882) D1105_00660 PF00753 Metallo-beta-lactamase superfamily D1105_00675 PF01230 HIT domain D1105_00680 PF00950 ABC 3 transport family D1105_00685 PF00950 ABC 3 transport family D1105_00690 PF01351 Ribonuclease HII D1105_00695 PF03193 RsgA GTPase D1105_00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_00700 PF03466 LysR substrate binding domain D1105_00705 PF13419 Haloacid dehalogenase-like hydrolase D1105_00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_00710 PF03466 LysR substrate binding domain D1105_00720 PF00710 Asparaginase, N-terminal D1105_00720 PF17763 Glutaminase/Asparaginase C-terminal domain D1105_00725 PF00117 Glutamine amidotransferase class-I D1105_00725 PF06418 CTP synthase N-terminus D1105_00730 PF10063 Uncharacterized integral membrane protein (DUF2301) D1105_00735 PF00694 Aconitase C-terminal domain D1105_00740 PF00330 Aconitase family (aconitate hydratase) D1105_00745 PF05651 Putative sugar diacid recognition D1105_00745 PF17853 GGDEF-like domain D1105_00745 PF13556 PucR C-terminal helix-turn-helix domain D1105_00750 PF02447 GntP family permease D1105_00755 PF02595 Glycerate kinase family D1105_00760 PF00708 Acylphosphatase D1105_00765 PF11398 Protein of unknown function (DUF2813) D1105_00770 PF11892 Domain of unknown function (DUF3412) D1105_00770 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1105_00770 PF03641 Possible lysine decarboxylase D1105_00775 PF01207 Dihydrouridine synthase (Dus) D1105_00785 PF03477 ATP cone domain D1105_00785 PF02867 Ribonucleotide reductase, barrel domain D1105_00785 PF00317 Ribonucleotide reductase, all-alpha domain D1105_00790 PF01106 NifU-like domain D1105_00790 PF01521 Iron-sulphur cluster biosynthesis D1105_00795 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D1105_00795 PF11973 NQRA C-terminal domain D1105_00800 PF03116 NQR2, RnfD, RnfE family D1105_00805 PF04205 FMN-binding domain D1105_00810 PF02508 Rnf-Nqr subunit, membrane protein D1105_00815 PF02508 Rnf-Nqr subunit, membrane protein D1105_00820 PF00111 2Fe-2S iron-sulfur cluster binding domain D1105_00820 PF00970 Oxidoreductase FAD-binding domain D1105_00820 PF00175 Oxidoreductase NAD-binding domain D1105_00825 PF02424 ApbE family D1105_00830 PF04400 (Na+)-NQR maturation NqrM D1105_00840 PF12832 MFS_1 like family D1105_00845 PF03807 NADP oxidoreductase coenzyme F420-dependent D1105_00845 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1105_00850 PF04381 Putative exonuclease, RdgC D1105_00855 PF13419 Haloacid dehalogenase-like hydrolase D1105_00870 PF02508 Rnf-Nqr subunit, membrane protein D1105_00875 PF04060 Putative Fe-S cluster D1105_00880 PF13375 RnfC Barrel sandwich hybrid domain D1105_00880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1105_00880 PF12838 4Fe-4S dicluster domain D1105_00885 PF03458 UPF0126 domain D1105_00890 PF03116 NQR2, RnfD, RnfE family D1105_00895 PF04205 FMN-binding domain D1105_00900 PF02508 Rnf-Nqr subunit, membrane protein D1105_00905 PF03279 Bacterial lipid A biosynthesis acyltransferase D1105_00920 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1105_00925 PF12627 Probable RNA and SrmB- binding site of polymerase A D1105_00925 PF12626 Polymerase A arginine-rich C-terminus D1105_00925 PF01743 Poly A polymerase head domain D1105_00930 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1105_00940 PF11739 Dicarboxylate transport D1105_00950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1105_00955 PF00929 Exonuclease D1105_00965 PF01817 Chorismate mutase type II D1105_00965 PF02153 Prephenate dehydrogenase D1105_00970 PF00793 DAHP synthetase I family D1105_00975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1105_00980 PF02887 Pyruvate kinase, alpha/beta domain D1105_00980 PF00224 Pyruvate kinase, barrel domain D1105_00985 PF00300 Histidine phosphatase superfamily (branch 1) D1105_00990 PF01207 Dihydrouridine synthase (Dus) D1105_00995 PF02954 Bacterial regulatory protein, Fis family D1105_01000 PF00209 Sodium:neurotransmitter symporter family D1105_01005 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1105_01010 PF01761 3-dehydroquinate synthase D1105_01015 PF01202 Shikimate kinase D1105_01020 PF00905 Penicillin binding protein transpeptidase domain D1105_01020 PF00912 Transglycosylase D1105_01020 PF17092 Penicillin-binding protein OB-like domain D1105_01025 PF11104 Type IV pilus assembly protein PilM; D1105_01045 PF00263 Bacterial type II and III secretion system protein D1105_01045 PF03958 Bacterial type II/III secretion system short domain D1105_01050 PF01029 NusB family D1105_01055 PF00586 AIR synthase related protein, N-terminal domain D1105_01055 PF02769 AIR synthase related protein, C-terminal domain D1105_01060 PF04608 Phosphatidylglycerophosphatase A D1105_01065 PF01810 LysE type translocator D1105_01070 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1105_01070 PF00588 SpoU rRNA Methylase family D1105_01075 PF00459 Inositol monophosphatase family D1105_01090 PF00464 Serine hydroxymethyltransferase D1105_01095 PF01513 ATP-NAD kinase D1105_01100 PF18019 HD domain D1105_01105 PF01867 CRISPR associated protein Cas1 D1105_01115 PF09615 CRISPR-associated protein (Cas_Csy3) D1105_01120 PF09614 CRISPR-associated protein (Cas_Csy2) D1105_01130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1105_01130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1105_01130 PF03129 Anticodon binding domain D1105_01130 PF02824 TGS domain D1105_01135 PF03783 Curli production assembly/transport component CsgG D1105_01145 PF05643 Putative bacterial lipoprotein (DUF799) D1105_01150 PF00707 Translation initiation factor IF-3, C-terminal domain D1105_01150 PF05198 Translation initiation factor IF-3, N-terminal domain D1105_01155 PF01632 Ribosomal protein L35 D1105_01160 PF00453 Ribosomal protein L20 D1105_01175 PF03471 Transporter associated domain D1105_01175 PF00571 CBS domain D1105_01175 PF01595 Cyclin M transmembrane N-terminal domain D1105_01180 PF00849 RNA pseudouridylate synthase D1105_01190 PF03652 Holliday junction resolvase D1105_01195 PF02622 Uncharacterized ACR, COG1678 D1105_01200 PF04452 RNA methyltransferase D1105_01210 PF01722 BolA-like protein D1105_01235 PF07516 SecA Wing and Scaffold domain D1105_01235 PF01043 SecA preprotein cross-linking domain D1105_01235 PF07517 SecA DEAD-like domain D1105_01235 PF02810 SEC-C motif D1105_01245 PF00293 NUDIX domain D1105_01250 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1105_01255 PF00696 Amino acid kinase family D1105_01260 PF00202 Aminotransferase class-III D1105_01265 PF17484 N-Lobe handle Tf-binding protein B D1105_01265 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1105_01265 PF17483 C-lobe handle domain of Tf-binding protein B D1105_01270 PF07715 TonB-dependent Receptor Plug Domain D1105_01270 PF00593 TonB dependent receptor D1105_01275 PF07497 Rho termination factor, RNA-binding domain D1105_01275 PF07498 Rho termination factor, N-terminal domain D1105_01275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1105_01280 PF00291 Pyridoxal-phosphate dependent enzyme D1105_01285 PF00288 GHMP kinases N terminal domain D1105_01285 PF08544 GHMP kinases C terminal D1105_01290 PF03447 Homoserine dehydrogenase, NAD binding domain D1105_01290 PF13840 ACT domain D1105_01290 PF00742 Homoserine dehydrogenase D1105_01290 PF00696 Amino acid kinase family D1105_01290 PF01842 ACT domain D1105_01295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1105_01295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1105_01300 PF01168 Alanine racemase, N-terminal domain D1105_01300 PF00842 Alanine racemase, C-terminal domain D1105_01305 PF13538 UvrD-like helicase C-terminal domain D1105_01335 PF07687 Peptidase dimerisation domain D1105_01335 PF01546 Peptidase family M20/M25/M40 D1105_01340 PF00156 Phosphoribosyl transferase domain D1105_01345 PF00625 Guanylate kinase D1105_01350 PF02321 Outer membrane efflux protein D1105_01355 PF03658 RnfH family Ubiquitin D1105_01360 PF03364 Polyketide cyclase / dehydrase and lipid transport D1105_01365 PF00005 ABC transporter D1105_01365 PF03459 TOBE domain D1105_01370 PF00528 Binding-protein-dependent transport system inner membrane component D1105_01380 PF01061 ABC-2 type transporter D1105_01385 PF00005 ABC transporter D1105_01390 PF12169 DNA polymerase III subunits gamma and tau domain III D1105_01390 PF12170 DNA polymerase III tau subunit V interacting with alpha D1105_01395 PF00156 Phosphoribosyl transferase domain D1105_01405 PF01042 Endoribonuclease L-PSP D1105_01415 PF04073 Aminoacyl-tRNA editing domain D1105_01420 PF00005 ABC transporter D1105_01425 PF01297 Zinc-uptake complex component A periplasmic D1105_01430 PF04358 DsrC like protein D1105_01435 PF01027 Inhibitor of apoptosis-promoting Bax1 D1105_01440 PF01066 CDP-alcohol phosphatidyltransferase D1105_01450 PF08459 UvrC Helix-hairpin-helix N-terminal D1105_01450 PF02151 UvrB/uvrC motif D1105_01450 PF01541 GIY-YIG catalytic domain D1105_01455 PF01026 TatD related DNase D1105_01460 PF13361 UvrD-like helicase C-terminal domain D1105_01460 PF00580 UvrD/REP helicase N-terminal domain D1105_01465 PF00005 ABC transporter D1105_01465 PF08402 TOBE domain D1105_01470 PF00528 Binding-protein-dependent transport system inner membrane component D1105_01475 PF00528 Binding-protein-dependent transport system inner membrane component D1105_01480 PF07499 RuvA, C-terminal domain D1105_01480 PF01330 RuvA N terminal domain D1105_01485 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1105_01485 PF05491 RuvB C-terminal winged helix domain D1105_01485 PF17864 RuvB AAA lid domain D1105_01495 PF00521 DNA gyrase/topoisomerase IV, subunit A D1105_01495 PF03989 DNA gyrase C-terminal domain, beta-propeller D1105_01500 PF12161 HsdM N-terminal domain D1105_01500 PF02384 N-6 DNA Methylase D1105_01520 PF01420 Type I restriction modification DNA specificity domain D1105_01545 PF12008 Type I restriction and modification enzyme - subunit R C terminal D1105_01545 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1105_01545 PF18766 SWI2/SNF2 ATPase D1105_01550 PF00005 ABC transporter D1105_01550 PF16326 ABC transporter C-terminal domain D1105_01550 PF12848 ABC transporter D1105_01555 PF00899 ThiF family D1105_01565 PF17274 Family of unknown function (DUF5339) D1105_01570 PF01654 Cytochrome bd terminal oxidase subunit I D1105_01575 PF02322 Cytochrome bd terminal oxidase subunit II D1105_01590 PF03061 Thioesterase superfamily D1105_01595 PF01618 MotA/TolQ/ExbB proton channel family D1105_01600 PF02472 Biopolymer transport protein ExbD/TolR D1105_01605 PF06519 TolA C-terminal D1105_01605 PF06519 TolA C-terminal D1105_01610 PF07676 WD40-like Beta Propeller Repeat D1105_01610 PF04052 TolB amino-terminal domain D1105_01615 PF00691 OmpA family D1105_01625 PF00226 DnaJ domain D1105_01625 PF05099 Tellurite resistance protein TerB D1105_01630 PF01207 Dihydrouridine synthase (Dus) D1105_01635 PF05128 Domain of unknown function (DUF697) D1105_01640 PF12848 ABC transporter D1105_01640 PF00005 ABC transporter D1105_01650 PF03454 MoeA C-terminal region (domain IV) D1105_01650 PF03453 MoeA N-terminal region (domain I and II) D1105_01650 PF00994 Probable molybdopterin binding domain D1105_01655 PF00899 ThiF family D1105_01665 PF01938 TRAM domain D1105_01665 PF05958 tRNA (Uracil-5-)-methyltransferase D1105_01670 PF13286 Phosphohydrolase-associated domain D1105_01670 PF01966 HD domain D1105_01675 PF12137 RNA polymerase recycling family C-terminal D1105_01675 PF00176 SNF2 family N-terminal domain D1105_01675 PF18339 RapA N-terminal Tudor like domain 1 D1105_01675 PF18337 RapA N-terminal Tudor like domain D1105_01675 PF00271 Helicase conserved C-terminal domain D1105_01680 PF00849 RNA pseudouridylate synthase D1105_01685 PF01510 N-acetylmuramoyl-L-alanine amidase D1105_01690 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1105_01695 PF00156 Phosphoribosyl transferase domain D1105_01700 PF01717 Cobalamin-independent synthase, Catalytic domain D1105_01705 PF01053 Cys/Met metabolism PLP-dependent enzyme D1105_01710 PF02600 Disulfide bond formation protein DsbB D1105_01715 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D1105_01720 PF07840 FadR C-terminal domain D1105_01720 PF00392 Bacterial regulatory proteins, gntR family D1105_01725 PF02562 PhoH-like protein D1105_01745 PF00293 NUDIX domain D1105_01750 PF01494 FAD binding domain D1105_01770 PF01494 FAD binding domain D1105_01775 PF03668 P-loop ATPase protein family D1105_01780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1105_01785 PF00005 ABC transporter D1105_01785 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1105_01790 PF03968 OstA-like protein D1105_01800 PF00311 Phosphoenolpyruvate carboxylase D1105_01805 PF04536 TPM domain D1105_01815 PF04011 LemA family D1105_01820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1105_01825 PF00294 pfkB family carbohydrate kinase D1105_01830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1105_01830 PF00381 PTS HPr component phosphorylation site D1105_01835 PF00128 Alpha amylase, catalytic domain D1105_01835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1105_01835 PF02806 Alpha amylase, C-terminal all-beta domain D1105_01840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1105_01840 PF00128 Alpha amylase, catalytic domain D1105_01840 PF18390 Glycogen debranching enzyme C-terminal domain D1105_01845 PF00483 Nucleotidyl transferase D1105_01850 PF00534 Glycosyl transferases group 1 D1105_01850 PF08323 Starch synthase catalytic domain D1105_01855 PF00343 Carbohydrate phosphorylase D1105_01860 PF00334 Nucleoside diphosphate kinase D1105_01865 PF09334 tRNA synthetases class I (M) D1105_01865 PF08264 Anticodon-binding domain of tRNA D1105_01865 PF01588 Putative tRNA binding domain D1105_01870 PF13378 Enolase C-terminal domain-like D1105_01880 PF01479 S4 domain D1105_01880 PF00849 RNA pseudouridylate synthase D1105_01885 PF07690 Major Facilitator Superfamily D1105_01900 PF01261 Xylose isomerase-like TIM barrel D1105_01905 PF00877 NlpC/P60 family D1105_01910 PF00717 Peptidase S24-like D1105_01915 PF01228 Glycine radical D1105_01920 PF03167 Uracil DNA glycosylase superfamily D1105_01925 PF04393 Protein of unknown function (DUF535) D1105_01930 PF03797 Autotransporter beta-domain D1105_01930 PF00082 Subtilase family D1105_01935 PF04408 Helicase associated domain (HA2) D1105_01935 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1105_01935 PF00270 DEAD/DEAH box helicase D1105_01935 PF11898 Domain of unknown function (DUF3418) D1105_01935 PF00271 Helicase conserved C-terminal domain D1105_01940 PF04284 Protein of unknown function (DUF441) D1105_01945 PF01025 GrpE D1105_01950 PF13416 Bacterial extracellular solute-binding protein D1105_01955 PF01554 MatE D1105_01960 PF12705 PD-(D/E)XK nuclease superfamily D1105_01960 PF13361 UvrD-like helicase C-terminal domain D1105_01960 PF00580 UvrD/REP helicase N-terminal domain D1105_01965 PF00795 Carbon-nitrogen hydrolase D1105_01970 PF03471 Transporter associated domain D1105_01970 PF00571 CBS domain D1105_01975 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1105_01980 PF00230 Major intrinsic protein D1105_01985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1105_01985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1105_01990 PF00004 ATPase family associated with various cellular activities (AAA) D1105_01990 PF05362 Lon protease (S16) C-terminal proteolytic domain D1105_01990 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1105_01995 PF07690 Major Facilitator Superfamily D1105_02000 PF03009 Glycerophosphoryl diester phosphodiesterase family D1105_02005 PF04324 BFD-like [2Fe-2S] binding domain D1105_02005 PF01266 FAD dependent oxidoreductase D1105_02010 PF00890 FAD binding domain D1105_02015 PF13183 4Fe-4S dicluster domain D1105_02015 PF02754 Cysteine-rich domain D1105_02020 PF01872 RibD C-terminal domain D1105_02020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1105_02025 PF00677 Lumazine binding domain D1105_02030 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1105_02030 PF00925 GTP cyclohydrolase II D1105_02035 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1105_02040 PF03449 Transcription elongation factor, N-terminal D1105_02040 PF01272 Transcription elongation factor, GreA/GreB, C-term D1105_02045 PF01380 SIS domain D1105_02045 PF00571 CBS domain D1105_02050 PF00883 Cytosol aminopeptidase family, catalytic domain D1105_02050 PF12404 Peptidase D1105_02055 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D1105_02060 PF01758 Sodium Bile acid symporter family D1105_02065 PF13533 Biotin-lipoyl like D1105_02075 PF00682 HMGL-like D1105_02075 PF08502 LeuA allosteric (dimerisation) domain D1105_02080 PF08281 Sigma-70, region 4 D1105_02080 PF04542 Sigma-70 region 2 D1105_02085 PF03872 Anti sigma-E protein RseA, N-terminal domain D1105_02085 PF03873 Anti sigma-E protein RseA, C-terminal domain D1105_02095 PF00501 AMP-binding enzyme D1105_02095 PF13193 AMP-binding enzyme C-terminal domain D1105_02105 PF00398 Ribosomal RNA adenine dimethylase D1105_02110 PF09312 SurA N-terminal domain D1105_02110 PF00639 PPIC-type PPIASE domain D1105_02115 PF00156 Phosphoribosyl transferase domain D1105_02120 PF01467 Cytidylyltransferase-like D1105_02120 PF00294 pfkB family carbohydrate kinase D1105_02125 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1105_02125 PF01926 50S ribosome-binding GTPase D1105_02130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1105_02130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1105_02130 PF01488 Shikimate / quinate 5-dehydrogenase D1105_02135 PF02824 TGS domain D1105_02135 PF04607 Region found in RelA / SpoT proteins D1105_02135 PF13291 ACT domain D1105_02140 PF13288 DXP reductoisomerase C-terminal domain D1105_02140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1105_02140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1105_02145 PF00132 Bacterial transferase hexapeptide (six repeats) D1105_02145 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1105_02150 PF07977 FabA-like domain D1105_02155 PF00132 Bacterial transferase hexapeptide (six repeats) D1105_02155 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1105_02165 PF01103 Surface antigen D1105_02165 PF07244 Surface antigen variable number repeat D1105_02170 PF02163 Peptidase family M50 D1105_02180 PF01255 Putative undecaprenyl diphosphate synthase D1105_02185 PF00753 Metallo-beta-lactamase superfamily D1105_02185 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1105_02190 PF00480 ROK family D1105_02195 PF01569 PAP2 superfamily D1105_02200 PF01985 CRS1 / YhbY (CRM) domain D1105_02205 PF00535 Glycosyl transferase family 2 D1105_02210 PF00768 D-alanyl-D-alanine carboxypeptidase D1105_02215 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1105_02220 PF00764 Arginosuccinate synthase D1105_02225 PF00075 RNase H D1105_02230 PF02674 Colicin V production protein D1105_02235 PF00156 Phosphoribosyl transferase domain D1105_02245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D1105_02245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D1105_02250 PF04355 SmpA / OmlA family D1105_02255 PF04245 37-kD nucleoid-associated bacterial protein D1105_02260 PF01042 Endoribonuclease L-PSP D1105_02265 PF02578 Multi-copper polyphenol oxidoreductase laccase D1105_02275 PF07119 Protein of unknown function (DUF1375) D1105_02280 PF00180 Isocitrate/isopropylmalate dehydrogenase D1105_02285 PF01641 SelR domain D1105_02290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1105_02290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1105_02300 PF04085 rod shape-determining protein MreC D1105_02305 PF04093 rod shape-determining protein MreD D1105_02310 PF12002 MgsA AAA+ ATPase C terminal D1105_02310 PF00004 ATPase family associated with various cellular activities (AAA) D1105_02310 PF16193 AAA C-terminal domain D1105_02315 PF00950 ABC 3 transport family D1105_02320 PF13230 Glutamine amidotransferases class-II D1105_02325 PF00561 alpha/beta hydrolase fold D1105_02330 PF02698 DUF218 domain D1105_02335 PF13018 Extended Signal Peptide of Type V secretion system D1105_02335 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin D1105_02335 PF03895 YadA-like membrane anchor domain D1105_02335 PF05662 Coiled stalk of trimeric autotransporter adhesin D1105_02340 PF02589 LUD domain D1105_02345 PF13183 4Fe-4S dicluster domain D1105_02345 PF02589 LUD domain D1105_02345 PF11870 Domain of unknown function (DUF3390) D1105_02350 PF02754 Cysteine-rich domain D1105_02355 PF02652 L-lactate permease D1105_02360 PF00816 H-NS histone family D1105_02365 PF03553 Na+/H+ antiporter family D1105_02370 PF13407 Periplasmic binding protein domain D1105_02375 PF02629 CoA binding domain D1105_02375 PF00549 CoA-ligase D1105_02380 PF00549 CoA-ligase D1105_02380 PF08442 ATP-grasp domain D1105_02385 PF04393 Protein of unknown function (DUF535) D1105_02390 PF00364 Biotin-requiring enzyme D1105_02390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1105_02390 PF02817 e3 binding domain D1105_02395 PF02779 Transketolase, pyrimidine binding domain D1105_02395 PF16870 2-oxoglutarate dehydrogenase C-terminal D1105_02395 PF00676 Dehydrogenase E1 component D1105_02395 PF16078 2-oxoglutarate dehydrogenase N-terminus D1105_02400 PF00005 ABC transporter D1105_02405 PF04225 Opacity-associated protein A LysM-like domain D1105_02405 PF01551 Peptidase family M23 D1105_02410 PF10411 Disulfide bond isomerase protein N-terminus D1105_02410 PF13098 Thioredoxin-like domain D1105_02415 PF17768 RecJ OB domain D1105_02415 PF02272 DHHA1 domain D1105_02415 PF01368 DHH family D1105_02420 PF01389 OmpA-like transmembrane domain D1105_02420 PF00691 OmpA family D1105_02430 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1105_02430 PF07730 Histidine kinase D1105_02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_02430 PF00672 HAMP domain D1105_02440 PF01725 Ham1 family D1105_02445 PF01906 Putative heavy-metal-binding D1105_02450 PF01268 Formate--tetrahydrofolate ligase D1105_02455 PF03692 Putative zinc- or iron-chelating domain D1105_02460 PF00106 short chain dehydrogenase D1105_02465 PF00291 Pyridoxal-phosphate dependent enzyme D1105_02470 PF00290 Tryptophan synthase alpha chain D1105_02475 PF12441 CopG antitoxin of type II toxin-antitoxin system D1105_02485 PF01367 5'-3' exonuclease, C-terminal SAM fold D1105_02485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1105_02485 PF00476 DNA polymerase family A D1105_02485 PF01612 3'-5' exonuclease D1105_02490 PF03548 Outer membrane lipoprotein carrier protein LolA D1105_02495 PF01371 Trp repressor protein D1105_02500 PF00912 Transglycosylase D1105_02505 PF02627 Carboxymuconolactone decarboxylase family D1105_02535 PF00881 Nitroreductase family D1105_02540 PF08443 RimK-like ATP-grasp domain D1105_02540 PF18030 RimK PreATP-grasp domain D1105_02545 PF02698 DUF218 domain D1105_02550 PF01515 Phosphate acetyl/butaryl transferase D1105_02550 PF03949 Malic enzyme, NAD binding domain D1105_02550 PF00390 Malic enzyme, N-terminal domain D1105_02555 PF01386 Ribosomal L25p family D1105_02565 PF06226 Protein of unknown function (DUF1007) D1105_02570 PF03824 High-affinity nickel-transport protein D1105_02575 PF01235 Sodium:alanine symporter family D1105_02580 PF00005 ABC transporter D1105_02585 PF00005 ABC transporter D1105_02590 PF00528 Binding-protein-dependent transport system inner membrane component D1105_02595 PF00899 ThiF family D1105_02600 PF02597 ThiS family D1105_02605 PF05690 Thiazole biosynthesis protein ThiG D1105_02610 PF04055 Radical SAM superfamily D1105_02610 PF06968 Biotin and Thiamin Synthesis associated domain D1105_02615 PF03070 TENA/THI-4/PQQC family D1105_02620 PF09084 NMT1/THI5 like D1105_02625 PF08543 Phosphomethylpyrimidine kinase D1105_02635 PF00009 Elongation factor Tu GTP binding domain D1105_02635 PF00679 Elongation factor G C-terminus D1105_02635 PF03144 Elongation factor Tu domain 2 D1105_02635 PF06421 GTP-binding protein LepA C-terminus D1105_02640 PF10502 Signal peptidase, peptidase S26 D1105_02645 PF14622 Ribonuclease-III-like D1105_02645 PF00035 Double-stranded RNA binding motif D1105_02650 PF01926 50S ribosome-binding GTPase D1105_02650 PF07650 KH domain D1105_02655 PF11967 Recombination protein O N terminal D1105_02655 PF02565 Recombination protein O C terminal D1105_02690 PF00437 Type II/IV secretion system protein D1105_02705 PF00263 Bacterial type II and III secretion system protein D1105_02705 PF03958 Bacterial type II/III secretion system short domain D1105_02730 PF00271 Helicase conserved C-terminal domain D1105_02730 PF00270 DEAD/DEAH box helicase D1105_02740 PF05872 Bacterial protein of unknown function (DUF853) D1105_02760 PF00528 Binding-protein-dependent transport system inner membrane component D1105_02775 PF00318 Ribosomal protein S2 D1105_02780 PF00889 Elongation factor TS D1105_02785 PF00884 Sulfatase D1105_02790 PF00696 Amino acid kinase family D1105_02795 PF01765 Ribosome recycling factor D1105_02800 PF00392 Bacterial regulatory proteins, gntR family D1105_02800 PF00155 Aminotransferase class I and II D1105_02805 PF01680 SOR/SNZ family D1105_02810 PF01174 SNO glutamine amidotransferase family D1105_02815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1105_02820 PF00271 Helicase conserved C-terminal domain D1105_02820 PF00270 DEAD/DEAH box helicase D1105_02820 PF03880 DbpA RNA binding domain D1105_02830 PF00013 KH domain D1105_02830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1105_02830 PF00575 S1 RNA binding domain D1105_02830 PF03725 3' exoribonuclease family, domain 2 D1105_02830 PF01138 3' exoribonuclease family, domain 1 D1105_02835 PF03989 DNA gyrase C-terminal domain, beta-propeller D1105_02835 PF00521 DNA gyrase/topoisomerase IV, subunit A D1105_02845 PF03882 MukF winged-helix domain D1105_02845 PF17192 MukF middle domain D1105_02845 PF17193 MukF C-terminal domain D1105_02850 PF04288 MukE-like family D1105_02855 PF16330 MukB hinge domain D1105_02855 PF04310 MukB N-terminal D1105_02860 PF07690 Major Facilitator Superfamily D1105_02865 PF00884 Sulfatase D1105_02865 PF11893 Domain of unknown function (DUF3413) D1105_02870 PF07208 Protein of unknown function (DUF1414) D1105_02875 PF00440 Bacterial regulatory proteins, tetR family D1105_02880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1105_02885 PF00873 AcrB/AcrD/AcrF family D1105_02890 PF00132 Bacterial transferase hexapeptide (six repeats) D1105_02890 PF12804 MobA-like NTP transferase domain D1105_02900 PF08942 Domain of unknown function (DUF1919) D1105_02905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1105_02905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1105_02905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1105_02905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1105_02910 PF00958 GMP synthase C terminal domain D1105_02910 PF00117 Glutamine amidotransferase class-I D1105_02910 PF02540 NAD synthase D1105_02920 PF00478 IMP dehydrogenase / GMP reductase domain D1105_02920 PF00571 CBS domain D1105_02925 PF01728 FtsJ-like methyltransferase D1105_02930 PF01434 Peptidase family M41 D1105_02930 PF17862 AAA+ lid domain D1105_02930 PF06480 FtsH Extracellular D1105_02930 PF00004 ATPase family associated with various cellular activities (AAA) D1105_02935 PF03222 Tryptophan/tyrosine permease family D1105_02940 PF03222 Tryptophan/tyrosine permease family D1105_02945 PF08335 GlnD PII-uridylyltransferase D1105_02945 PF01966 HD domain D1105_02950 PF06295 Protein of unknown function (DUF1043) D1105_02955 PF00572 Ribosomal protein L13 D1105_02960 PF00380 Ribosomal protein S9/S16 D1105_02965 PF03883 Peroxide stress protein YaaA D1105_02975 PF16916 Dimerisation domain of Zinc Transporter D1105_02975 PF01545 Cation efflux family D1105_02980 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D1105_02985 PF00375 Sodium:dicarboxylate symporter family D1105_02990 PF00881 Nitroreductase family D1105_02995 PF01409 tRNA synthetases class II core domain (F) D1105_02995 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1105_03000 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1105_03000 PF01588 Putative tRNA binding domain D1105_03000 PF03147 Ferredoxin-fold anticodon binding domain D1105_03000 PF03484 tRNA synthetase B5 domain D1105_03000 PF03483 B3/4 domain D1105_03005 PF00216 Bacterial DNA-binding protein D1105_03010 PF00877 NlpC/P60 family D1105_03025 PF00480 ROK family D1105_03025 PF01047 MarR family D1105_03030 PF01612 3'-5' exonuclease D1105_03030 PF00570 HRDC domain D1105_03035 PF01037 Lrp/AsnC ligand binding domain D1105_03040 PF01580 FtsK/SpoIIIE family D1105_03040 PF09397 Ftsk gamma domain D1105_03040 PF17854 FtsK alpha domain D1105_03040 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1105_03045 PF04228 Putative neutral zinc metallopeptidase D1105_03050 PF00793 DAHP synthetase I family D1105_03055 PF00814 Glycoprotease family D1105_03060 PF00265 Thymidine kinase D1105_03065 PF06005 Cell division protein ZapB D1105_03070 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1105_03075 PF01784 NIF3 (NGG1p interacting factor 3) D1105_03080 PF02687 FtsX-like permease family D1105_03080 PF12704 MacB-like periplasmic core domain D1105_03080 PF00005 ABC transporter D1105_03085 PF16527 Two-component sensor protein CpxA, periplasmic domain D1105_03085 PF00672 HAMP domain D1105_03085 PF00512 His Kinase A (phospho-acceptor) domain D1105_03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_03090 PF00072 Response regulator receiver domain D1105_03090 PF00486 Transcriptional regulatory protein, C terminal D1105_03095 PF03819 MazG nucleotide pyrophosphohydrolase domain D1105_03100 PF01039 Carboxyl transferase domain D1105_03100 PF17848 Acetyl-coA carboxylase zinc finger domain D1105_03105 PF08245 Mur ligase middle domain D1105_03115 PF17384 RimP C-terminal SH3 domain D1105_03115 PF02576 RimP N-terminal domain D1105_03120 PF00575 S1 RNA binding domain D1105_03120 PF08529 NusA N-terminal domain D1105_03120 PF13184 NusA-like KH domain D1105_03125 PF00009 Elongation factor Tu GTP binding domain D1105_03125 PF11987 Translation-initiation factor 2 D1105_03125 PF04760 Translation initiation factor IF-2, N-terminal region D1105_03130 PF02033 Ribosome-binding factor A D1105_03135 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1105_03135 PF09157 Pseudouridine synthase II TruB, C-terminal D1105_03135 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1105_03140 PF13406 Transglycosylase SLT domain D1105_03145 PF07411 Domain of unknown function (DUF1508) D1105_03150 PF07085 DRTGG domain D1105_03150 PF01515 Phosphate acetyl/butaryl transferase D1105_03155 PF00871 Acetokinase family D1105_03160 PF02872 5'-nucleotidase, C-terminal domain D1105_03160 PF00149 Calcineurin-like phosphoesterase D1105_03165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D1105_03170 PF13609 Gram-negative porin D1105_03180 PF00483 Nucleotidyl transferase D1105_03185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1105_03185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1105_03185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1105_03185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1105_03190 PF02599 Global regulator protein family D1105_03195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1105_03195 PF01411 tRNA synthetases class II (A) D1105_03195 PF02272 DHHA1 domain D1105_03200 PF00582 Universal stress protein family D1105_03205 PF00325 Bacterial regulatory proteins, crp family D1105_03205 PF00027 Cyclic nucleotide-binding domain D1105_03210 PF04386 Stringent starvation protein B D1105_03215 PF02798 Glutathione S-transferase, N-terminal domain D1105_03215 PF00043 Glutathione S-transferase, C-terminal domain D1105_03220 PF00731 AIR carboxylase D1105_03225 PF17763 Glutaminase/Asparaginase C-terminal domain D1105_03225 PF00710 Asparaginase, N-terminal D1105_03230 PF02222 ATP-grasp domain D1105_03230 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1105_03235 PF00155 Aminotransferase class I and II D1105_03245 PF00557 Metallopeptidase family M24 D1105_03245 PF05195 Aminopeptidase P, N-terminal domain D1105_03250 PF13635 Domain of unknown function (DUF4143) D1105_03250 PF13173 AAA domain D1105_03255 PF01850 PIN domain D1105_03270 PF17757 UvrB interaction domain D1105_03270 PF02151 UvrB/uvrC motif D1105_03270 PF04851 Type III restriction enzyme, res subunit D1105_03270 PF00271 Helicase conserved C-terminal domain D1105_03270 PF12344 Ultra-violet resistance protein B D1105_03280 PF09375 Imelysin D1105_03285 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1105_03285 PF04261 Dyp-type peroxidase family D1105_03295 PF02811 PHP domain D1105_03305 PF00929 Exonuclease D1105_03305 PF08411 Exonuclease C-terminal D1105_03310 PF00654 Voltage gated chloride channel D1105_03315 PF00152 tRNA synthetases class II (D, K and N) D1105_03315 PF01336 OB-fold nucleic acid binding domain D1105_03320 PF04055 Radical SAM superfamily D1105_03330 PF01132 Elongation factor P (EF-P) OB domain D1105_03330 PF08207 Elongation factor P (EF-P) KOW-like domain D1105_03330 PF09285 Elongation factor P, C-terminal D1105_03335 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1105_03335 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1105_03340 PF07690 Major Facilitator Superfamily D1105_03345 PF01464 Transglycosylase SLT domain D1105_03345 PF14718 Soluble lytic murein transglycosylase L domain D1105_03350 PF00156 Phosphoribosyl transferase domain D1105_03355 PF01053 Cys/Met metabolism PLP-dependent enzyme D1105_03360 PF05173 Dihydrodipicolinate reductase, C-terminus D1105_03360 PF01113 Dihydrodipicolinate reductase, N-terminus D1105_03365 PF18125 RlmM ferredoxin-like domain D1105_03365 PF01728 FtsJ-like methyltransferase D1105_03370 PF04241 Protein of unknown function (DUF423) D1105_03375 PF01565 FAD binding domain D1105_03375 PF09330 D-lactate dehydrogenase, membrane binding D1105_03380 PF01568 Molydopterin dinucleotide binding domain D1105_03380 PF18364 Molybdopterin oxidoreductase N-terminal domain D1105_03380 PF00384 Molybdopterin oxidoreductase D1105_03385 PF03264 NapC/NirT cytochrome c family, N-terminal region D1105_03390 PF04055 Radical SAM superfamily D1105_03390 PF06463 Molybdenum Cofactor Synthesis C D1105_03395 PF01967 MoaC family D1105_03400 PF02597 ThiS family D1105_03405 PF02391 MoaE protein D1105_03410 PF02130 Uncharacterized protein family UPF0054 D1105_03415 PF17176 tRNA-binding domain D1105_03415 PF05127 Helicase D1105_03415 PF13718 GNAT acetyltransferase 2 D1105_03420 PF08272 Topoisomerase I zinc-ribbon-like D1105_03420 PF01751 Toprim domain D1105_03420 PF01131 DNA topoisomerase D1105_03420 PF01396 Topoisomerase DNA binding C4 zinc finger D1105_03425 PF03466 LysR substrate binding domain D1105_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_03430 PF00583 Acetyltransferase (GNAT) family D1105_03430 PF00696 Amino acid kinase family D1105_03435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1105_03440 PF00155 Aminotransferase class I and II D1105_03445 PF01053 Cys/Met metabolism PLP-dependent enzyme D1105_03450 PF00266 Aminotransferase class-V D1105_03455 PF00176 SNF2 family N-terminal domain D1105_03455 PF00271 Helicase conserved C-terminal domain D1105_03465 PF01555 DNA methylase D1105_03475 PF01380 SIS domain D1105_03475 PF01418 Helix-turn-helix domain, rpiR family D1105_03480 PF04074 YhcH/YjgK/YiaL D1105_03485 PF02541 Ppx/GppA phosphatase family D1105_03490 PF04363 Protein of unknown function (DUF496) D1105_03495 PF00696 Amino acid kinase family D1105_03495 PF01842 ACT domain D1105_03500 PF03477 ATP cone domain D1105_03505 PF05166 YcgL domain D1105_03510 PF03796 DnaB-like helicase C terminal domain D1105_03510 PF00772 DnaB-like helicase N terminal domain D1105_03515 PF01497 Periplasmic binding protein D1105_03520 PF01032 FecCD transport family D1105_03525 PF01032 FecCD transport family D1105_03530 PF00005 ABC transporter D1105_03535 PF01865 Protein of unknown function DUF47 D1105_03540 PF01384 Phosphate transporter family D1105_03545 PF08239 Bacterial SH3 domain D1105_03555 PF01814 Hemerythrin HHE cation binding domain D1105_03560 PF01702 Queuine tRNA-ribosyltransferase D1105_03570 PF00313 'Cold-shock' DNA-binding domain D1105_03575 PF00484 Carbonic anhydrase D1105_03580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1105_03580 PF00205 Thiamine pyrophosphate enzyme, central domain D1105_03580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1105_03585 PF10369 Small subunit of acetolactate synthase D1105_03590 PF01523 Putative modulator of DNA gyrase D1105_03595 PF04751 Protein of unknown function (DUF615) D1105_03600 PF04247 Invasion gene expression up-regulator, SirB D1105_03605 PF02441 Flavoprotein D1105_03610 PF04474 Protein of unknown function (DUF554) D1105_03620 PF01253 Translation initiation factor SUI1 D1105_03625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1105_03630 PF18073 Rubredoxin metal binding domain D1105_03635 PF06305 Lipopolysaccharide assembly protein A domain D1105_03640 PF00216 Bacterial DNA-binding protein D1105_03645 PF00575 S1 RNA binding domain D1105_03650 PF02224 Cytidylate kinase D1105_03655 PF13180 PDZ domain D1105_03665 PF03840 Preprotein translocase SecG subunit D1105_03670 PF01751 Toprim domain D1105_03670 PF01131 DNA topoisomerase D1105_03675 PF00245 Alkaline phosphatase D1105_03680 PF03411 Penicillin-insensitive murein endopeptidase D1105_03685 PF01264 Chorismate synthase D1105_03690 PF00924 Mechanosensitive ion channel D1105_03690 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1105_03690 PF12795 Mechanosensitive ion channel porin domain D1105_03695 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1105_03695 PF00924 Mechanosensitive ion channel D1105_03695 PF12795 Mechanosensitive ion channel porin domain D1105_03700 PF00501 AMP-binding enzyme D1105_03705 PF17206 SeqA protein N-terminal domain D1105_03705 PF03925 SeqA protein C-terminal domain D1105_03710 PF00561 alpha/beta hydrolase fold D1105_03715 PF13649 Methyltransferase domain D1105_03735 PF00575 S1 RNA binding domain D1105_03735 PF00773 RNB domain D1105_03735 PF08206 Ribonuclease B OB domain D1105_03740 PF03788 LrgA family D1105_03745 PF04172 LrgB-like family D1105_03750 PF00149 Calcineurin-like phosphoesterase D1105_03760 PF13356 Arm DNA-binding domain D1105_03760 PF00589 Phage integrase family D1105_03810 PF03354 Phage Terminase D1105_03850 PF03889 Alternative ribosome-rescue factor A D1105_03855 PF13649 Methyltransferase domain D1105_03860 PF01594 AI-2E family transporter D1105_03865 PF01933 Uncharacterised protein family UPF0052 D1105_03870 PF02547 Queuosine biosynthesis protein D1105_03875 PF03772 Competence protein D1105_03875 PF13567 Domain of unknown function (DUF4131) D1105_03875 PF00753 Metallo-beta-lactamase superfamily D1105_03880 PF00375 Sodium:dicarboxylate symporter family D1105_03885 PF01219 Prokaryotic diacylglycerol kinase D1105_03890 PF02872 5'-nucleotidase, C-terminal domain D1105_03890 PF00149 Calcineurin-like phosphoesterase D1105_03910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1105_03910 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1105_03915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1105_03915 PF00364 Biotin-requiring enzyme D1105_03915 PF02817 e3 binding domain D1105_03920 PF17831 Pyruvate dehydrogenase E1 component middle domain D1105_03920 PF00456 Transketolase, thiamine diphosphate binding domain D1105_03925 PF01180 Dihydroorotate dehydrogenase D1105_03930 PF14572 Phosphoribosyl synthetase-associated domain D1105_03930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1105_03935 PF08544 GHMP kinases C terminal D1105_03935 PF00288 GHMP kinases N terminal domain D1105_03940 PF03550 Outer membrane lipoprotein LolB D1105_03945 PF00664 ABC transporter transmembrane region D1105_03945 PF00005 ABC transporter D1105_03950 PF04172 LrgB-like family D1105_03960 PF06733 DEAD_2 D1105_03960 PF13307 Helicase C-terminal domain D1105_03970 PF17755 UvrA DNA-binding domain D1105_03970 PF17760 UvrA interaction domain D1105_03975 PF00436 Single-strand binding protein family D1105_04010 PF03466 LysR substrate binding domain D1105_04010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_04015 PF03060 Nitronate monooxygenase D1105_04020 PF07690 Major Facilitator Superfamily D1105_04025 PF04237 YjbR D1105_04030 PF00005 ABC transporter D1105_04030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1105_04035 PF00528 Binding-protein-dependent transport system inner membrane component D1105_04035 PF12911 N-terminal TM domain of oligopeptide transport permease C D1105_04040 PF00528 Binding-protein-dependent transport system inner membrane component D1105_04045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1105_04050 PF18024 Helix-turn-helix domain D1105_04050 PF00158 Sigma-54 interaction domain D1105_04055 PF13580 SIS domain D1105_04060 PF01293 Phosphoenolpyruvate carboxykinase D1105_04065 PF04977 Septum formation initiator D1105_04070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1105_04075 PF02542 YgbB family D1105_04085 PF00884 Sulfatase D1105_04090 PF00111 2Fe-2S iron-sulfur cluster binding domain D1105_04090 PF03476 MOSC N-terminal beta barrel domain D1105_04090 PF03473 MOSC domain D1105_04095 PF02609 Exonuclease VII small subunit D1105_04100 PF00348 Polyprenyl synthetase D1105_04110 PF00152 tRNA synthetases class II (D, K and N) D1105_04110 PF01336 OB-fold nucleic acid binding domain D1105_04115 PF00575 S1 RNA binding domain D1105_04115 PF10150 Ribonuclease E/G family D1105_04120 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D1105_04120 PF18381 YcaO cyclodehydratase C-terminal domain D1105_04125 PF04851 Type III restriction enzyme, res subunit D1105_04125 PF08774 VRR-NUC domain D1105_04135 PF08003 Protein of unknown function (DUF1698) D1105_04145 PF06725 3D domain D1105_04145 PF03562 MltA specific insert domain D1105_04155 PF02601 Exonuclease VII, large subunit D1105_04155 PF13742 OB-fold nucleic acid binding domain D1105_04165 PF00576 HIUase/Transthyretin family D1105_04170 PF00356 Bacterial regulatory proteins, lacI family D1105_04170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1105_04175 PF09335 SNARE associated Golgi protein D1105_04180 PF00204 DNA gyrase B D1105_04180 PF00986 DNA gyrase B subunit, carboxyl terminus D1105_04180 PF18053 DNA gyrase B subunit insert domain D1105_04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_04180 PF01751 Toprim domain D1105_04185 PF01040 UbiA prenyltransferase family D1105_04190 PF08220 DeoR-like helix-turn-helix domain D1105_04190 PF00455 DeoR C terminal sensor domain D1105_04195 PF08328 Adenylosuccinate lyase C-terminal D1105_04195 PF00206 Lyase D1105_04200 PF04356 Protein of unknown function (DUF489) D1105_04205 PF00664 ABC transporter transmembrane region D1105_04205 PF00005 ABC transporter D1105_04210 PF00664 ABC transporter transmembrane region D1105_04210 PF00005 ABC transporter D1105_04215 PF04357 TamB, inner membrane protein subunit of TAM complex D1105_04220 PF01103 Surface antigen D1105_04220 PF17243 POTRA domain TamA domain 1 D1105_04225 PF04748 Divergent polysaccharide deacetylase D1105_04230 PF01551 Peptidase family M23 D1105_04235 PF00300 Histidine phosphatase superfamily (branch 1) D1105_04240 PF01810 LysE type translocator D1105_04245 PF00485 Phosphoribulokinase / Uridine kinase family D1105_04250 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) D1105_04255 PF14278 Transcriptional regulator C-terminal region D1105_04255 PF00440 Bacterial regulatory proteins, tetR family D1105_04260 PF13533 Biotin-lipoyl like D1105_04265 PF00005 ABC transporter D1105_04275 PF02321 Outer membrane efflux protein D1105_04280 PF02233 NAD(P) transhydrogenase beta subunit D1105_04285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1105_04285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D1105_04285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1105_04290 PF00588 SpoU rRNA Methylase family D1105_04295 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1105_04295 PF14489 QueF-like protein D1105_04305 PF00578 AhpC/TSA family D1105_04310 PF06969 HemN C-terminal domain D1105_04310 PF04055 Radical SAM superfamily D1105_04315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1105_04320 PF00528 Binding-protein-dependent transport system inner membrane component D1105_04325 PF00005 ABC transporter D1105_04325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1105_04330 PF00005 ABC transporter D1105_04330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1105_04335 PF00890 FAD binding domain D1105_04340 PF01717 Cobalamin-independent synthase, Catalytic domain D1105_04345 PF02219 Methylenetetrahydrofolate reductase D1105_04350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1105_04355 PF03222 Tryptophan/tyrosine permease family D1105_04360 PF03313 Serine dehydratase alpha chain D1105_04360 PF03315 Serine dehydratase beta chain D1105_04365 PF01266 FAD dependent oxidoreductase D1105_04365 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D1105_04370 PF00218 Indole-3-glycerol phosphate synthase D1105_04370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1105_04375 PF02661 Fic/DOC family D1105_04375 PF12728 Helix-turn-helix domain D1105_04380 PF04287 tRNA pseudouridine synthase C D1105_04385 PF00849 RNA pseudouridylate synthase D1105_04390 PF03701 Uncharacterised protein family (UPF0181) D1105_04400 PF01928 CYTH domain D1105_04405 PF04317 YcjX-like family, DUF463 D1105_04410 PF01668 SmpB protein D1105_04415 PF02403 Seryl-tRNA synthetase N-terminal domain D1105_04415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1105_04420 PF01546 Peptidase family M20/M25/M40 D1105_04420 PF07687 Peptidase dimerisation domain D1105_04425 PF03606 C4-dicarboxylate anaerobic carrier D1105_04430 PF03575 Peptidase family S51 D1105_04435 PF08264 Anticodon-binding domain of tRNA D1105_04435 PF13603 Leucyl-tRNA synthetase, Domain 2 D1105_04435 PF00133 tRNA synthetases class I (I, L, M and V) D1105_04440 PF04390 Lipopolysaccharide-assembly D1105_04445 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D1105_04445 PF06144 DNA polymerase III, delta subunit D1105_04450 PF03884 DNA gyrase inhibitor YacG D1105_04455 PF01121 Dephospho-CoA kinase D1105_04465 PF00482 Type II secretion system (T2SS), protein F D1105_04470 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1105_04470 PF00437 Type II/IV secretion system protein D1105_04475 PF07963 Prokaryotic N-terminal methylation motif D1105_04480 PF18073 Rubredoxin metal binding domain D1105_04490 PF00186 Dihydrofolate reductase D1105_04495 PF00696 Amino acid kinase family D1105_04495 PF01472 PUA domain D1105_04500 PF01925 Sulfite exporter TauE/SafE D1105_04505 PF00633 Helix-hairpin-helix motif D1105_04505 PF10576 Iron-sulfur binding domain of endonuclease III D1105_04505 PF00730 HhH-GPD superfamily base excision DNA repair protein D1105_04510 PF02803 Thiolase, C-terminal domain D1105_04510 PF00108 Thiolase, N-terminal domain D1105_04515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1105_04515 PF00378 Enoyl-CoA hydratase/isomerase D1105_04515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1105_04530 PF02634 FdhD/NarQ family D1105_04535 PF01568 Molydopterin dinucleotide binding domain D1105_04535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1105_04535 PF00384 Molybdopterin oxidoreductase D1105_04540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1105_04540 PF00384 Molybdopterin oxidoreductase D1105_04540 PF01568 Molydopterin dinucleotide binding domain D1105_04545 PF09163 Formate dehydrogenase N, transmembrane D1105_04545 PF13247 4Fe-4S dicluster domain D1105_04550 PF01292 Prokaryotic cytochrome b561 D1105_04555 PF04216 Protein involved in formate dehydrogenase formation D1105_04570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1105_04570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1105_04580 PF00701 Dihydrodipicolinate synthetase family D1105_04585 PF03279 Bacterial lipid A biosynthesis acyltransferase D1105_04590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1105_04595 PF01416 tRNA pseudouridine synthase D1105_04600 PF01227 GTP cyclohydrolase I D1105_04615 PF12464 Maltose acetyltransferase D1105_04615 PF14602 Hexapeptide repeat of succinyl-transferase D1105_04620 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D1105_04625 PF03466 LysR substrate binding domain D1105_04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_04630 PF03180 NLPA lipoprotein D1105_04635 PF03180 NLPA lipoprotein D1105_04640 PF00528 Binding-protein-dependent transport system inner membrane component D1105_04645 PF09383 NIL domain D1105_04645 PF00005 ABC transporter D1105_04655 PF09190 DALR domain D1105_04655 PF01406 tRNA synthetases class I (C) catalytic domain D1105_04660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1105_04665 PF01743 Poly A polymerase head domain D1105_04665 PF12627 Probable RNA and SrmB- binding site of polymerase A D1105_04665 PF01966 HD domain D1105_04675 PF07715 TonB-dependent Receptor Plug Domain D1105_04675 PF00593 TonB dependent receptor D1105_04700 PF04384 Iron-sulphur cluster assembly D1105_04705 PF00111 2Fe-2S iron-sulfur cluster binding domain D1105_04710 PF00012 Hsp70 protein D1105_04715 PF10946 Protein of unknown function DUF2625 D1105_04725 PF07743 HSCB C-terminal oligomerisation domain D1105_04730 PF01521 Iron-sulphur cluster biosynthesis D1105_04735 PF01592 NifU-like N terminal domain D1105_04740 PF00266 Aminotransferase class-V D1105_04745 PF02082 Transcriptional regulator D1105_04750 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1105_04755 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1105_04755 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1105_04760 PF18415 Histidine kinase receptor ArcB trans-membrane domain D1105_04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_04760 PF01627 Hpt domain D1105_04760 PF00989 PAS fold D1105_04760 PF00072 Response regulator receiver domain D1105_04760 PF00512 His Kinase A (phospho-acceptor) domain D1105_04770 PF01713 Smr domain D1105_04780 PF08241 Methyltransferase domain D1105_04785 PF04301 Protein of unknown function (DUF452) D1105_04790 PF00155 Aminotransferase class I and II D1105_04795 PF00202 Aminotransferase class-III D1105_04800 PF05175 Methyltransferase small domain D1105_04805 PF01272 Transcription elongation factor, GreA/GreB, C-term D1105_04805 PF03449 Transcription elongation factor, N-terminal D1105_04810 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1105_04835 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1105_04835 PF02382 N-terminal domain in RTX protein D1105_04835 PF08339 RTX C-terminal domain D1105_04840 PF02794 RTX toxin acyltransferase family D1105_04845 PF17176 tRNA-binding domain D1105_04845 PF05127 Helicase D1105_04845 PF13718 GNAT acetyltransferase 2 D1105_04850 PF02142 MGS-like domain D1105_04850 PF01808 AICARFT/IMPCHase bienzyme D1105_04870 PF04829 Pre-toxin domain with VENN motif D1105_04870 PF05860 haemagglutination activity domain D1105_04870 PF13332 Hemagglutinin repeat D1105_04870 PF13018 Extended Signal Peptide of Type V secretion system D1105_04880 PF03968 OstA-like protein D1105_04880 PF04453 LPS transport system D D1105_04885 PF04055 Radical SAM superfamily D1105_04885 PF06969 HemN C-terminal domain D1105_04895 PF04220 Der GTPase activator (YihI) D1105_04900 PF06826 Predicted Permease Membrane Region D1105_04900 PF02080 TrkA-C domain D1105_04905 PF03616 Sodium/glutamate symporter D1105_04910 PF06062 Uncharacterised protein family (UPF0231) D1105_04915 PF03710 Glutamate-ammonia ligase adenylyltransferase D1105_04915 PF08335 GlnD PII-uridylyltransferase D1105_04920 PF03795 YCII-related domain D1105_04925 PF03061 Thioesterase superfamily D1105_04930 PF04279 Intracellular septation protein A D1105_04940 PF04217 Protein of unknown function, DUF412 D1105_04945 PF01171 PP-loop family D1105_04950 PF13726 Na+-H+ antiporter family D1105_04950 PF03553 Na+/H+ antiporter family D1105_04955 PF03372 Endonuclease/Exonuclease/phosphatase family D1105_04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_04960 PF03466 LysR substrate binding domain D1105_04980 PF01197 Ribosomal protein L31 D1105_04985 PF02780 Transketolase, C-terminal domain D1105_04985 PF00456 Transketolase, thiamine diphosphate binding domain D1105_04985 PF02779 Transketolase, pyrimidine binding domain D1105_04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_04990 PF00183 Hsp90 protein D1105_04995 PF00199 Catalase D1105_04995 PF06628 Catalase-related immune-responsive D1105_05005 PF00149 Calcineurin-like phosphoesterase D1105_05010 PF03477 ATP cone domain D1105_05010 PF02867 Ribonucleotide reductase, barrel domain D1105_05010 PF00317 Ribonucleotide reductase, all-alpha domain D1105_05015 PF00268 Ribonucleotide reductase, small chain D1105_05020 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D1105_05020 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D1105_05025 PF00288 GHMP kinases N terminal domain D1105_05025 PF10509 Galactokinase galactose-binding signature D1105_05025 PF08544 GHMP kinases C terminal D1105_05030 PF01263 Aldose 1-epimerase D1105_05035 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1105_05035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1105_05035 PF00703 Glycosyl hydrolases family 2 D1105_05035 PF16353 Domain of unknown function(DUF4981) D1105_05035 PF02929 Beta galactosidase small chain D1105_05040 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1105_05040 PF06594 Haemolysin-type calcium binding protein related domain D1105_05050 PF10609 NUBPL iron-transfer P-loop NTPase D1105_05060 PF01914 MarC family integral membrane protein D1105_05065 PF13145 PPIC-type PPIASE domain D1105_05070 PF00999 Sodium/hydrogen exchanger family D1105_05075 PF00312 Ribosomal protein S15 D1105_05080 PF05661 Protein of unknown function (DUF808) D1105_05085 PF07219 HemY protein N-terminus D1105_05090 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D1105_05095 PF02602 Uroporphyrinogen-III synthase HemD D1105_05100 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1105_05100 PF03900 Porphobilinogen deaminase, C-terminal domain D1105_05105 PF00171 Aldehyde dehydrogenase family D1105_05105 PF00465 Iron-containing alcohol dehydrogenase D1105_05110 PF00118 TCP-1/cpn60 chaperonin family D1105_05115 PF00166 Chaperonin 10 Kd subunit D1105_05120 PF01048 Phosphorylase superfamily D1105_05125 PF01791 DeoC/LacD family aldolase D1105_05130 PF07662 Na+ dependent nucleoside transporter C-terminus D1105_05130 PF01773 Na+ dependent nucleoside transporter N-terminus D1105_05130 PF07670 Nucleoside recognition D1105_05140 PF01081 KDPG and KHG aldolase D1105_05145 PF00294 pfkB family carbohydrate kinase D1105_05150 PF02614 Glucuronate isomerase D1105_05165 PF00392 Bacterial regulatory proteins, gntR family D1105_05165 PF07729 FCD domain D1105_05175 PF01641 SelR domain D1105_05175 PF01625 Peptide methionine sulfoxide reductase D1105_05180 PF00535 Glycosyl transferase family 2 D1105_05185 PF00535 Glycosyl transferase family 2 D1105_05195 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1105_05205 PF04230 Polysaccharide pyruvyl transferase D1105_05210 PF02698 DUF218 domain D1105_05215 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1105_05215 PF18074 Primosomal protein N C-terminal domain D1105_05215 PF17764 3′ DNA-binding domain (3′BD) D1105_05215 PF00271 Helicase conserved C-terminal domain D1105_05215 PF00270 DEAD/DEAH box helicase D1105_05220 PF00800 Prephenate dehydratase D1105_05220 PF01817 Chorismate mutase type II D1105_05225 PF01432 Peptidase family M3 D1105_05230 PF04055 Radical SAM superfamily D1105_05235 PF02901 Pyruvate formate lyase-like D1105_05235 PF01228 Glycine radical D1105_05240 PF01226 Formate/nitrite transporter D1105_05250 PF01435 Peptidase family M48 D1105_05255 PF11798 IMS family HHH motif D1105_05255 PF11799 impB/mucB/samB family C-terminal domain D1105_05255 PF00817 impB/mucB/samB family D1105_05260 PF03956 Lysine exporter LysO D1105_05265 PF00425 chorismate binding enzyme D1105_05270 PF00155 Aminotransferase class I and II D1105_05275 PF00892 EamA-like transporter family D1105_05280 PF00892 EamA-like transporter family D1105_05285 PF01810 LysE type translocator D1105_05290 PF00593 TonB dependent receptor D1105_05290 PF04886 PT repeat D1105_05290 PF07715 TonB-dependent Receptor Plug Domain D1105_05295 PF01243 Pyridoxamine 5'-phosphate oxidase D1105_05305 PF03918 Cytochrome C biogenesis protein D1105_05310 PF08534 Redoxin D1105_05315 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1105_05315 PF01578 Cytochrome C assembly protein D1105_05320 PF02254 TrkA-N domain D1105_05320 PF00999 Sodium/hydrogen exchanger family D1105_05325 PF01295 Adenylate cyclase, class-I D1105_05325 PF12633 Adenylate cyclase NT domain D1105_05330 PF02801 Beta-ketoacyl synthase, C-terminal domain D1105_05330 PF00109 Beta-ketoacyl synthase, N-terminal domain D1105_05340 PF04076 Bacterial OB fold (BOF) protein D1105_05355 PF00486 Transcriptional regulatory protein, C terminal D1105_05355 PF00072 Response regulator receiver domain D1105_05360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_05360 PF08521 Two-component sensor kinase N-terminal D1105_05360 PF00512 His Kinase A (phospho-acceptor) domain D1105_05365 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D1105_05370 PF02699 Preprotein translocase subunit D1105_05375 PF02355 Protein export membrane protein D1105_05375 PF13721 SecD export protein N-terminal TM region D1105_05375 PF07549 SecD/SecF GG Motif D1105_05380 PF02355 Protein export membrane protein D1105_05380 PF07549 SecD/SecF GG Motif D1105_05385 PF00210 Ferritin-like domain D1105_05390 PF00210 Ferritin-like domain D1105_05395 PF00860 Permease family D1105_05400 PF02545 Maf-like protein D1105_05410 PF02926 THUMP domain D1105_05410 PF02568 Thiamine biosynthesis protein (ThiI) D1105_05415 PF00709 Adenylosuccinate synthetase D1105_05420 PF01145 SPFH domain / Band 7 family D1105_05425 PF01145 SPFH domain / Band 7 family D1105_05430 PF00085 Thioredoxin D1105_05435 PF00860 Permease family D1105_05440 PF02772 S-adenosylmethionine synthetase, central domain D1105_05440 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1105_05440 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1105_05450 PF13520 Amino acid permease D1105_05455 PF13520 Amino acid permease D1105_05465 PF07687 Peptidase dimerisation domain D1105_05465 PF01546 Peptidase family M20/M25/M40 D1105_05470 PF03922 OmpW family D1105_05475 PF00004 ATPase family associated with various cellular activities (AAA) D1105_05475 PF17871 AAA lid domain D1105_05475 PF02861 Clp amino terminal domain, pathogenicity island component D1105_05475 PF10431 C-terminal, D2-small domain, of ClpB protein D1105_05475 PF07724 AAA domain (Cdc48 subfamily) D1105_05480 PF01758 Sodium Bile acid symporter family D1105_05485 PF03960 ArsC family D1105_05495 PF00206 Lyase D1105_05495 PF10415 Fumarase C C-terminus D1105_05505 PF02769 AIR synthase related protein, C-terminal domain D1105_05505 PF00586 AIR synthase related protein, N-terminal domain D1105_05510 PF04650 YSIRK type signal peptide D1105_05510 PF00746 LPXTG cell wall anchor motif D1105_05510 PF00728 Glycosyl hydrolase family 20, catalytic domain D1105_05510 PF07501 G5 domain D1105_05515 PF06508 Queuosine biosynthesis protein QueC D1105_05520 PF01242 6-pyruvoyl tetrahydropterin synthase D1105_05525 PF04055 Radical SAM superfamily D1105_05540 PF00883 Cytosol aminopeptidase family, catalytic domain D1105_05540 PF02789 Cytosol aminopeptidase family, N-terminal domain D1105_05550 PF03739 Lipopolysaccharide export system permease LptF/LptG D1105_05555 PF03739 Lipopolysaccharide export system permease LptF/LptG D1105_05560 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1105_05560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1105_05560 PF14579 Helix-hairpin-helix motif D1105_05560 PF02811 PHP domain D1105_05560 PF01336 OB-fold nucleic acid binding domain D1105_05580 PF02222 ATP-grasp domain D1105_05580 PF01370 NAD dependent epimerase/dehydratase family D1105_05585 PF01553 Acyltransferase D1105_05590 PF00717 Peptidase S24-like D1105_05590 PF01726 LexA DNA binding domain D1105_05595 PF02976 DNA mismatch repair enzyme MutH D1105_05600 PF03741 Integral membrane protein TerC family D1105_05605 PF00933 Glycosyl hydrolase family 3 N terminal domain D1105_05610 PF05958 tRNA (Uracil-5-)-methyltransferase D1105_05615 PF00113 Enolase, C-terminal TIM barrel domain D1105_05615 PF03952 Enolase, N-terminal domain D1105_05620 PF00293 NUDIX domain D1105_05625 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) D1105_05630 PF09382 RQC domain D1105_05630 PF16124 RecQ zinc-binding D1105_05630 PF00570 HRDC domain D1105_05630 PF00271 Helicase conserved C-terminal domain D1105_05630 PF00270 DEAD/DEAH box helicase D1105_05635 PF01491 Frataxin-like domain D1105_05640 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1105_05645 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1105_05650 PF00814 Glycoprotease family D1105_05655 PF13525 Outer membrane lipoprotein D1105_05660 PF01479 S4 domain D1105_05660 PF00849 RNA pseudouridylate synthase D1105_05665 PF14256 YwiC-like protein D1105_05670 PF00365 Phosphofructokinase D1105_05675 PF00266 Aminotransferase class-V D1105_05680 PF00565 Staphylococcal nuclease homologue D1105_05685 PF01235 Sodium:alanine symporter family D1105_05690 PF01594 AI-2E family transporter D1105_05700 PF16325 Peptidase family U32 C-terminal domain D1105_05700 PF01136 Peptidase family U32 D1105_05705 PF04932 O-Antigen ligase D1105_05710 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1105_05710 PF00534 Glycosyl transferases group 1 D1105_05715 PF01467 Cytidylyltransferase-like D1105_05720 PF00929 Exonuclease D1105_05725 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1105_05730 PF01476 LysM domain D1105_05730 PF01520 N-acetylmuramoyl-L-alanine amidase D1105_05735 PF00342 Phosphoglucose isomerase D1105_05740 PF04380 Membrane fusogenic activity D1105_05765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1105_05765 PF08501 Shikimate dehydrogenase substrate binding domain D1105_05765 PF01488 Shikimate / quinate 5-dehydrogenase D1105_05770 PF01300 Telomere recombination D1105_05775 PF01396 Topoisomerase DNA binding C4 zinc finger D1105_05780 PF04266 ASCH domain D1105_05785 PF02631 RecX family D1105_05790 PF00154 recA bacterial DNA recombination protein D1105_05795 PF01063 Amino-transferase class IV D1105_05800 PF00425 chorismate binding enzyme D1105_05805 PF02646 RmuC family D1105_05810 PF00117 Glutamine amidotransferase class-I D1105_05815 PF03625 Domain of unknown function DUF302 D1105_05815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1105_05820 PF01336 OB-fold nucleic acid binding domain D1105_05820 PF00152 tRNA synthetases class II (D, K and N) D1105_05820 PF02938 GAD domain D1105_05825 PF00293 NUDIX domain D1105_05830 PF01709 Transcriptional regulator D1105_05840 PF02075 Crossover junction endodeoxyribonuclease RuvC D1105_05845 PF05193 Peptidase M16 inactive domain D1105_05845 PF00675 Insulinase (Peptidase family M16) D1105_05850 PF01717 Cobalamin-independent synthase, Catalytic domain D1105_05850 PF08267 Cobalamin-independent synthase, N-terminal domain D1105_05855 PF00939 Sodium:sulfate symporter transmembrane region D1105_05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_05860 PF03466 LysR substrate binding domain D1105_05865 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1105_05875 PF01479 S4 domain D1105_05875 PF00849 RNA pseudouridylate synthase D1105_05880 PF01300 Telomere recombination D1105_05890 PF04261 Dyp-type peroxidase family D1105_05895 PF00425 chorismate binding enzyme D1105_05895 PF04715 Anthranilate synthase component I, N terminal region D1105_05900 PF00117 Glutamine amidotransferase class-I D1105_05905 PF02885 Glycosyl transferase family, helical bundle domain D1105_05905 PF00591 Glycosyl transferase family, a/b domain D1105_05910 PF08241 Methyltransferase domain D1105_05915 PF16036 Chalcone isomerase-like D1105_05920 PF04325 Protein of unknown function (DUF465) D1105_05925 PF03948 Ribosomal protein L9, C-terminal domain D1105_05925 PF01281 Ribosomal protein L9, N-terminal domain D1105_05930 PF01084 Ribosomal protein S18 D1105_05935 PF00436 Single-strand binding protein family D1105_05940 PF01250 Ribosomal protein S6 D1105_05945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1105_05945 PF02843 Phosphoribosylglycinamide synthetase, C domain D1105_05945 PF02844 Phosphoribosylglycinamide synthetase, N domain D1105_05950 PF04973 Nicotinamide mononucleotide transporter D1105_05955 PF09976 Tetratricopeptide repeat-like domain D1105_05960 PF03129 Anticodon binding domain D1105_05960 PF13393 Histidyl-tRNA synthetase D1105_05965 PF04551 GcpE protein D1105_05970 PF13464 Domain of unknown function (DUF4115) D1105_05975 PF01740 STAS domain D1105_05975 PF00916 Sulfate permease family D1105_05985 PF14698 Argininosuccinate lyase C-terminal D1105_05985 PF00206 Lyase D1105_05990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D1105_05990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D1105_05995 PF02254 TrkA-N domain D1105_05995 PF00999 Sodium/hydrogen exchanger family D1105_06010 PF03466 LysR substrate binding domain D1105_06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_06025 PF06719 AraC-type transcriptional regulator N-terminus D1105_06025 PF12833 Helix-turn-helix domain D1105_06030 PF03466 LysR substrate binding domain D1105_06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_06035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1105_06040 PF00296 Luciferase-like monooxygenase D1105_06045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1105_06045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1105_06050 PF00881 Nitroreductase family D1105_06055 PF01914 MarC family integral membrane protein D1105_06065 PF00756 Putative esterase D1105_06070 PF02798 Glutathione S-transferase, N-terminal domain D1105_06085 PF00107 Zinc-binding dehydrogenase D1105_06085 PF08240 Alcohol dehydrogenase GroES-like domain D1105_06090 PF02028 BCCT, betaine/carnitine/choline family transporter D1105_06105 PF03595 Voltage-dependent anion channel D1105_06110 PF13419 Haloacid dehalogenase-like hydrolase D1105_06125 PF00005 ABC transporter D1105_06125 PF00664 ABC transporter transmembrane region D1105_06130 PF02664 S-Ribosylhomocysteinase (LuxS) D1105_06135 PF02470 MlaD protein D1105_06140 PF01475 Ferric uptake regulator family D1105_06145 PF00258 Flavodoxin D1105_06150 PF01402 Ribbon-helix-helix protein, copG family D1105_06155 PF04073 Aminoacyl-tRNA editing domain D1105_06165 PF00860 Permease family D1105_06170 PF02635 DsrE/DsrF-like family D1105_06180 PF01176 Translation initiation factor 1A / IF-1 D1105_06185 PF10144 Bacterial virulence factor haemolysin D1105_06190 PF18429 Domain of unknown function (DUF5609) D1105_06195 PF04461 Protein of unknown function (DUF520) D1105_06205 PF00343 Carbohydrate phosphorylase D1105_06210 PF00196 Bacterial regulatory proteins, luxR family D1105_06210 PF17874 MalT-like TPR region D1105_06215 PF07148 Maltose operon periplasmic protein precursor (MalM) D1105_06220 PF02264 LamB porin D1105_06225 PF00005 ABC transporter D1105_06225 PF17912 MalK OB fold domain D1105_06230 PF01547 Bacterial extracellular solute-binding protein D1105_06235 PF00528 Binding-protein-dependent transport system inner membrane component D1105_06235 PF14785 Maltose transport system permease protein MalF P2 domain D1105_06240 PF00528 Binding-protein-dependent transport system inner membrane component D1105_06245 PF02446 4-alpha-glucanotransferase D1105_06250 PF02554 Carbon starvation protein CstA D1105_06255 PF01026 TatD related DNase D1105_06260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1105_06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1105_06265 PF03350 Uncharacterized protein family, UPF0114 D1105_06270 PF00881 Nitroreductase family D1105_06285 PF00005 ABC transporter D1105_06290 PF01116 Fructose-bisphosphate aldolase class-II D1105_06295 PF00162 Phosphoglycerate kinase D1105_06300 PF00939 Sodium:sulfate symporter transmembrane region D1105_06305 PF00939 Sodium:sulfate symporter transmembrane region D1105_06310 PF00939 Sodium:sulfate symporter transmembrane region D1105_06315 PF01751 Toprim domain D1105_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_06315 PF00986 DNA gyrase B subunit, carboxyl terminus D1105_06315 PF00204 DNA gyrase B D1105_06320 PF00512 His Kinase A (phospho-acceptor) domain D1105_06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1105_06325 PF00486 Transcriptional regulatory protein, C terminal D1105_06325 PF00072 Response regulator receiver domain D1105_06330 PF00005 ABC transporter D1105_06335 PF00528 Binding-protein-dependent transport system inner membrane component D1105_06340 PF00528 Binding-protein-dependent transport system inner membrane component D1105_06345 PF12849 PBP superfamily domain D1105_06350 PF09278 MerR, DNA binding D1105_06350 PF00376 MerR family regulatory protein D1105_06360 PF00403 Heavy-metal-associated domain D1105_06365 PF00403 Heavy-metal-associated domain D1105_06370 PF00106 short chain dehydrogenase D1105_06375 PF00881 Nitroreductase family D1105_06380 PF01343 Peptidase family S49 D1105_06385 PF00445 Ribonuclease T2 family D1105_06390 PF10263 SprT-like family D1105_06390 PF17283 SprT-like zinc ribbon domain D1105_06395 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1105_06400 PF16921 Tex protein YqgF-like domain D1105_06400 PF09371 Tex-like protein N-terminal domain D1105_06400 PF00575 S1 RNA binding domain D1105_06400 PF17674 HHH domain D1105_06410 PF04055 Radical SAM superfamily D1105_06435 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1105_06445 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D1105_06450 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D1105_06455 PF03966 Trm112p-like protein D1105_06460 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1105_06465 PF10431 C-terminal, D2-small domain, of ClpB protein D1105_06465 PF06689 ClpX C4-type zinc finger D1105_06465 PF07724 AAA domain (Cdc48 subfamily) D1105_06470 PF00574 Clp protease D1105_06475 PF02657 Fe-S metabolism associated domain D1105_06490 PF00929 Exonuclease D1105_06495 PF12848 ABC transporter D1105_06495 PF00005 ABC transporter D1105_06500 PF02627 Carboxymuconolactone decarboxylase family D1105_06515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1105_06520 PF01722 BolA-like protein D1105_06530 PF05494 MlaC protein D1105_06535 PF02470 MlaD protein D1105_06540 PF02405 Permease MlaE D1105_06545 PF00005 ABC transporter D1105_06550 PF00595 PDZ domain D1105_06555 PF01370 NAD dependent epimerase/dehydratase family D1105_06555 PF08338 Domain of unknown function (DUF1731) D1105_06560 PF02863 Arginine repressor, C-terminal domain D1105_06560 PF01316 Arginine repressor, DNA binding domain D1105_06565 PF00056 lactate/malate dehydrogenase, NAD binding domain D1105_06565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1105_06575 PF05191 Adenylate kinase, active site lid D1105_06585 PF07690 Major Facilitator Superfamily D1105_06590 PF01370 NAD dependent epimerase/dehydratase family D1105_06595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1105_06595 PF03120 NAD-dependent DNA ligase OB-fold domain D1105_06595 PF01653 NAD-dependent DNA ligase adenylation domain D1105_06595 PF00533 BRCA1 C Terminus (BRCT) domain D1105_06595 PF12826 Helix-hairpin-helix motif D1105_06600 PF04354 ZipA, C-terminal FtsZ-binding domain D1105_06615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1105_06615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D1105_06625 PF06250 YhcG PDDEXK nuclease domain D1105_06625 PF17761 DUF1016 N-terminal domain D1105_06630 PF07690 Major Facilitator Superfamily D1105_06635 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1105_06640 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1105_06640 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1105_06645 PF00459 Inositol monophosphatase family D1105_06650 PF00293 NUDIX domain D1105_06655 PF01479 S4 domain D1105_06660 PF01430 Hsp33 protein D1105_06685 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1105_06690 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1105_06705 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1105_06715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1105_06715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1105_06720 PF00696 Amino acid kinase family D1105_06725 PF02378 Phosphotransferase system, EIIC D1105_06725 PF00367 phosphotransferase system, EIIB D1105_06730 PF00005 ABC transporter D1105_06735 PF00528 Binding-protein-dependent transport system inner membrane component D1105_06740 PF00381 PTS HPr component phosphorylation site D1105_06745 PF05524 PEP-utilising enzyme, N-terminal D1105_06745 PF00391 PEP-utilising enzyme, mobile domain D1105_06745 PF02896 PEP-utilising enzyme, TIM barrel domain D1105_06750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1105_06755 PF04055 Radical SAM superfamily D1105_06755 PF01938 TRAM domain D1105_06755 PF00919 Uncharacterized protein family UPF0004 D1105_06760 PF00580 UvrD/REP helicase N-terminal domain D1105_06760 PF13361 UvrD-like helicase C-terminal domain D1105_06765 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1105_06770 PF01924 Hydrogenase formation hypA family D1105_06775 PF00586 AIR synthase related protein, N-terminal domain D1105_06775 PF02769 AIR synthase related protein, C-terminal domain D1105_06780 PF07503 HypF finger D1105_06780 PF17788 HypF Kae1-like domain D1105_06780 PF01300 Telomere recombination D1105_06780 PF00708 Acylphosphatase D1105_06785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1105_06785 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D1105_06790 PF13247 4Fe-4S dicluster domain D1105_06795 PF03916 Polysulphide reductase, NrfD D1105_06800 PF00374 Nickel-dependent hydrogenase D1105_06805 PF01750 Hydrogenase maturation protease D1105_06810 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D1105_06815 PF01455 HupF/HypC family D1105_06820 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D1105_06855 PF00270 DEAD/DEAH box helicase D1105_06855 PF03461 TRCF domain D1105_06855 PF17757 UvrB interaction domain D1105_06855 PF02559 CarD-like/TRCF domain D1105_06855 PF00271 Helicase conserved C-terminal domain D1105_06860 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1105_06860 PF01433 Peptidase family M1 domain D1105_06860 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1105_06865 PF02660 Glycerol-3-phosphate acyltransferase D1105_06870 PF02152 Dihydroneopterin aldolase D1105_06875 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D1105_06875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1105_06880 PF18075 FtsX extracellular domain D1105_06885 PF00005 ABC transporter D1105_06890 PF02881 SRP54-type protein, helical bundle domain D1105_06890 PF00448 SRP54-type protein, GTPase domain D1105_06900 PF04269 Protein of unknown function, DUF440 D1105_06905 PF01613 Flavin reductase like domain D1105_06910 PF03848 Tellurite resistance protein TehB D1105_06910 PF09313 Domain of unknown function (DUF1971) D1105_06915 PF00528 Binding-protein-dependent transport system inner membrane component D1105_06920 PF00528 Binding-protein-dependent transport system inner membrane component D1105_06925 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1105_06930 PF00005 ABC transporter D1105_06935 PF01161 Phosphatidylethanolamine-binding protein D1105_06940 PF01699 Sodium/calcium exchanger protein D1105_06945 PF01381 Helix-turn-helix D1105_06955 PF02683 Cytochrome C biogenesis protein transmembrane region D1105_06955 PF13098 Thioredoxin-like domain D1105_06955 PF11412 Disulphide bond corrector protein DsbC D1105_06960 PF04315 Elongation factor P hydroxylase D1105_06965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1105_06970 PF04348 LppC putative lipoprotein D1105_06975 PF02021 Uncharacterised protein family UPF0102 D1105_06980 PF13580 SIS domain D1105_06985 PF04972 BON domain D1105_06990 PF01464 Transglycosylase SLT domain D1105_06990 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1105_07010 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1105_07010 PF01578 Cytochrome C assembly protein D1105_07015 PF03100 CcmE D1105_07020 PF04995 Heme exporter protein D (CcmD) D1105_07025 PF01578 Cytochrome C assembly protein D1105_07030 PF03379 CcmB protein D1105_07035 PF00005 ABC transporter D1105_07040 PF00308 Bacterial dnaA protein D1105_07075 PF04277 Oxaloacetate decarboxylase, gamma chain D1105_07080 PF02436 Conserved carboxylase domain D1105_07080 PF00682 HMGL-like D1105_07080 PF00364 Biotin-requiring enzyme D1105_07085 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D1105_07090 PF08274 PhnA Zinc-Ribbon D1105_07090 PF03831 PhnA domain D1105_07095 PF00034 Cytochrome c D1105_07095 PF03150 Di-haem cytochrome c peroxidase D1105_07095 PF14376 Haem-binding domain D1105_07100 PF02594 Uncharacterised ACR, YggU family COG1872 D1105_07105 PF02325 YGGT family D1105_07110 PF04320 Protein with unknown function (DUF469) D1105_07115 PF02390 Putative methyltransferase D1105_07120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1105_07120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1105_07125 PF02504 Fatty acid synthesis protein D1105_07130 PF01783 Ribosomal L32p protein family D1105_07135 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1105_07140 PF01578 Cytochrome C assembly protein D1105_07145 PF01595 Cyclin M transmembrane N-terminal domain D1105_07145 PF03471 Transporter associated domain D1105_07145 PF00571 CBS domain D1105_07150 PF00209 Sodium:neurotransmitter symporter family D1105_07160 PF03610 PTS system fructose IIA component D1105_07160 PF03830 PTS system sorbose subfamily IIB component D1105_07165 PF03609 PTS system sorbose-specific iic component D1105_07170 PF03613 PTS system mannose/fructose/sorbose family IID component D1105_07175 PF06173 Protein of unknown function (DUF986) D1105_07180 PF01238 Phosphomannose isomerase type I D1105_07195 PF00664 ABC transporter transmembrane region D1105_07195 PF00005 ABC transporter D1105_07195 PF03412 Peptidase C39 family D1105_07200 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1105_07200 PF02382 N-terminal domain in RTX protein D1105_07200 PF08339 RTX C-terminal domain D1105_07215 PF00005 ABC transporter D1105_07215 PF08402 TOBE domain D1105_07220 PF01225 Mur ligase family, catalytic domain D1105_07220 PF08245 Mur ligase middle domain D1105_07220 PF02875 Mur ligase family, glutamate ligase domain D1105_07225 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D1105_07235 PF03144 Elongation factor Tu domain 2 D1105_07235 PF03143 Elongation factor Tu C-terminal domain D1105_07235 PF00009 Elongation factor Tu GTP binding domain D1105_07240 PF00679 Elongation factor G C-terminus D1105_07240 PF14492 Elongation Factor G, domain II D1105_07240 PF03764 Elongation factor G, domain IV D1105_07240 PF03144 Elongation factor Tu domain 2 D1105_07240 PF00009 Elongation factor Tu GTP binding domain D1105_07245 PF00177 Ribosomal protein S7p/S5e D1105_07250 PF00164 Ribosomal protein S12/S23 D1105_07255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1105_07260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1105_07270 PF04225 Opacity-associated protein A LysM-like domain D1105_07270 PF08525 Opacity-associated protein A N-terminal motif D1105_07280 PF02666 Phosphatidylserine decarboxylase D1105_07285 PF08463 EcoEI R protein C-terminal D1105_07285 PF00271 Helicase conserved C-terminal domain D1105_07285 PF04851 Type III restriction enzyme, res subunit D1105_07285 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1105_07290 PF12161 HsdM N-terminal domain D1105_07290 PF02384 N-6 DNA Methylase D1105_07305 PF02899 Phage integrase, N-terminal SAM-like domain D1105_07305 PF00589 Phage integrase family D1105_07315 PF02655 ATP-grasp domain D1105_07315 PF18419 ATP-grasp-like domain D1105_07315 PF04262 Glutamate-cysteine ligase D1105_07325 PF03222 Tryptophan/tyrosine permease family D1105_07330 PF04175 Protein of unknown function (DUF406) D1105_07335 PF00248 Aldo/keto reductase family D1105_07340 PF00501 AMP-binding enzyme D1105_07345 PF06039 Malate:quinone oxidoreductase (Mqo) D1105_07365 PF02653 Branched-chain amino acid transport system / permease component D1105_07370 PF00005 ABC transporter D1105_07375 PF13407 Periplasmic binding protein domain D1105_07380 PF00691 OmpA family D1105_07380 PF01389 OmpA-like transmembrane domain D1105_07385 PF02913 FAD linked oxidases, C-terminal domain D1105_07385 PF13183 4Fe-4S dicluster domain D1105_07385 PF01565 FAD binding domain D1105_07390 PF03061 Thioesterase superfamily D1105_07395 PF02096 60Kd inner membrane protein D1105_07395 PF14849 YidC periplasmic domain D1105_07400 PF03264 NapC/NirT cytochrome c family, N-terminal region D1105_07405 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D1105_07410 PF12837 4Fe-4S binding domain D1105_07410 PF12801 4Fe-4S binding domain D1105_07415 PF12838 4Fe-4S dicluster domain D1105_07415 PF12800 4Fe-4S binding domain D1105_07420 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1105_07420 PF01568 Molydopterin dinucleotide binding domain D1105_07420 PF00384 Molybdopterin oxidoreductase D1105_07420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1105_07430 PF13187 4Fe-4S dicluster domain D1105_07430 PF12838 4Fe-4S dicluster domain D1105_07435 PF02525 Flavodoxin-like fold D1105_07450 PF00575 S1 RNA binding domain D1105_07450 PF10150 Ribonuclease E/G family D1105_07450 PF12111 Polyribonucleotide phosphorylase C terminal D1105_07460 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D1105_07465 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D1105_07470 PF01297 Zinc-uptake complex component A periplasmic D1105_07485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1105_07485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1105_07490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1105_07495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1105_07495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1105_07495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1105_07495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1105_07500 PF00585 C-terminal regulatory domain of Threonine dehydratase D1105_07500 PF00291 Pyridoxal-phosphate dependent enzyme D1105_07505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1105_07510 PF00230 Major intrinsic protein D1105_07520 PF18389 TrmO C-terminal domain D1105_07520 PF01980 tRNA-methyltransferase O D1105_07525 PF01040 UbiA prenyltransferase family D1105_07530 PF01521 Iron-sulphur cluster biosynthesis D1105_07535 PF01061 ABC-2 type transporter D1105_07540 PF00005 ABC transporter D1105_07550 PF00535 Glycosyl transferase family 2 D1105_07565 PF03275 UDP-galactopyranose mutase D1105_07570 PF00535 Glycosyl transferase family 2 D1105_07580 PF02397 Bacterial sugar transferase D1105_07585 PF16363 GDP-mannose 4,6 dehydratase D1105_07590 PF01165 Ribosomal protein S21 D1105_07595 PF10410 DnaB-helicase binding domain of primase D1105_07595 PF08278 DNA primase DnaG DnaB-binding D1105_07595 PF08275 DNA primase catalytic core, N-terminal domain D1105_07595 PF01807 CHC2 zinc finger D1105_07600 PF04545 Sigma-70, region 4 D1105_07600 PF00140 Sigma-70 factor, region 1.2 D1105_07600 PF04539 Sigma-70 region 3 D1105_07600 PF04546 Sigma-70, non-essential region D1105_07600 PF04542 Sigma-70 region 2 D1105_07600 PF03979 Sigma-70 factor, region 1.1 D1105_07605 PF00579 tRNA synthetases class I (W and Y) D1105_07605 PF01479 S4 domain D1105_07615 PF00575 S1 RNA binding domain D1105_07615 PF00773 RNB domain D1105_07615 PF08206 Ribonuclease B OB domain D1105_07615 PF08461 Ribonuclease R winged-helix domain D1105_07615 PF17876 Cold shock domain D1105_07620 PF00578 AhpC/TSA family D1105_07625 PF00440 Bacterial regulatory proteins, tetR family D1105_07630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_07630 PF03466 LysR substrate binding domain D1105_07635 PF08534 Redoxin D1105_07635 PF00462 Glutaredoxin D1105_07665 PF08543 Phosphomethylpyrimidine kinase D1105_07675 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1105_07680 PF07731 Multicopper oxidase D1105_07680 PF07732 Multicopper oxidase D1105_07685 PF01553 Acyltransferase D1105_07690 PF08534 Redoxin D1105_07695 PF01926 50S ribosome-binding GTPase D1105_07695 PF12631 MnmE helical domain D1105_07695 PF10396 GTP-binding protein TrmE N-terminus D1105_07700 PF05167 Uncharacterised ACR (DUF711) D1105_07710 PF17954 Quercetinase C-terminal cupin domain D1105_07710 PF02678 Pirin D1105_07715 PF00210 Ferritin-like domain D1105_07730 PF12805 FUSC-like inner membrane protein yccS D1105_07735 PF02142 MGS-like domain D1105_07740 PF00291 Pyridoxal-phosphate dependent enzyme D1105_07740 PF14821 Threonine synthase N terminus D1105_07750 PF10458 Valyl tRNA synthetase tRNA binding arm D1105_07750 PF08264 Anticodon-binding domain of tRNA D1105_07750 PF00133 tRNA synthetases class I (I, L, M and V) D1105_07770 PF04364 DNA polymerase III chi subunit, HolC D1105_07775 PF01476 LysM domain D1105_07780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1105_07780 PF05698 Bacterial trigger factor protein (TF) C-terminus D1105_07780 PF05697 Bacterial trigger factor protein (TF) D1105_07785 PF00581 Rhodanese-like domain D1105_07790 PF02556 Preprotein translocase subunit SecB D1105_07795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1105_07795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1105_07800 PF00132 Bacterial transferase hexapeptide (six repeats) D1105_07800 PF06426 Serine acetyltransferase, N-terminal D1105_07805 PF03144 Elongation factor Tu domain 2 D1105_07805 PF00009 Elongation factor Tu GTP binding domain D1105_07805 PF03143 Elongation factor Tu C-terminal domain D1105_07830 PF00485 Phosphoribulokinase / Uridine kinase family D1105_07835 PF08534 Redoxin D1105_07840 PF03918 Cytochrome C biogenesis protein D1105_07845 PF03918 Cytochrome C biogenesis protein D1105_07850 PF00994 Probable molybdopterin binding domain D1105_07855 PF00543 Nitrogen regulatory protein P-II D1105_07860 PF01252 Signal peptidase (SPase) II D1105_07865 PF02401 LytB protein D1105_07870 PF03937 Flavinator of succinate dehydrogenase D1105_07880 PF04055 Radical SAM superfamily D1105_07885 PF02798 Glutathione S-transferase, N-terminal domain D1105_07885 PF00043 Glutathione S-transferase, C-terminal domain D1105_07890 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1105_07890 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1105_07900 PF02313 Fumarate reductase subunit D D1105_07905 PF02300 Fumarate reductase subunit C D1105_07910 PF13085 2Fe-2S iron-sulfur cluster binding domain D1105_07910 PF13183 4Fe-4S dicluster domain D1105_07915 PF00890 FAD binding domain D1105_07915 PF02910 Fumarate reductase flavoprotein C-term D1105_07920 PF00152 tRNA synthetases class II (D, K and N) D1105_07925 PF01678 Diaminopimelate epimerase D1105_07930 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1105_07935 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1105_07945 PF03702 Anhydro-N-acetylmuramic acid kinase D1105_07950 PF01380 SIS domain D1105_07970 PF01523 Putative modulator of DNA gyrase D1105_07975 PF01171 PP-loop family D1105_07975 PF09179 TilS substrate binding domain D1105_07975 PF11734 TilS substrate C-terminal domain D1105_07985 PF02899 Phage integrase, N-terminal SAM-like domain D1105_07985 PF00589 Phage integrase family D1105_08040 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1105_08045 PF06899 WzyE protein, O-antigen assembly polymerase D1105_08050 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D1105_08055 PF03063 Prismane/CO dehydrogenase family D1105_08060 PF00970 Oxidoreductase FAD-binding domain D1105_08060 PF00111 2Fe-2S iron-sulfur cluster binding domain D1105_08060 PF00175 Oxidoreductase NAD-binding domain D1105_08065 PF01943 Polysaccharide biosynthesis protein D1105_08070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1105_08080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1105_08080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1105_08080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1105_08085 PF02350 UDP-N-acetylglucosamine 2-epimerase D1105_08095 PF00953 Glycosyl transferase family 4 D1105_08100 PF00202 Aminotransferase class-III D1105_08110 PF03023 Lipid II flippase MurJ D1105_08115 PF01649 Ribosomal protein S20 D1105_08120 PF02080 TrkA-C domain D1105_08120 PF02254 TrkA-N domain D1105_08125 PF01189 16S rRNA methyltransferase RsmB/F D1105_08125 PF01029 NusB family D1105_08130 PF00009 Elongation factor Tu GTP binding domain D1105_08130 PF03144 Elongation factor Tu domain 2 D1105_08130 PF09106 Elongation factor SelB, winged helix D1105_08130 PF09107 Elongation factor SelB, winged helix D1105_08135 PF03841 L-seryl-tRNA selenium transferase D1105_08135 PF12390 Selenocysteine synthase N terminal D1105_08145 PF00258 Flavodoxin D1105_08155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1105_08155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1105_08170 PF00593 TonB dependent receptor D1105_08170 PF07715 TonB-dependent Receptor Plug Domain D1105_08175 PF17483 C-lobe handle domain of Tf-binding protein B D1105_08175 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1105_08175 PF17484 N-Lobe handle Tf-binding protein B D1105_08180 PF02472 Biopolymer transport protein ExbD/TolR D1105_08185 PF01618 MotA/TolQ/ExbB proton channel family D1105_08195 PF03956 Lysine exporter LysO D1105_08205 PF02615 Malate/L-lactate dehydrogenase D1105_08210 PF06821 Serine hydrolase D1105_08230 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D1105_08230 PF00535 Glycosyl transferase family 2 D1105_08235 PF17101 Stealth protein CR1, conserved region 1 D1105_08235 PF11380 Stealth protein CR2, conserved region 2 D1105_08240 PF02563 Polysaccharide biosynthesis/export protein D1105_08250 PF01061 ABC-2 type transporter D1105_08255 PF00005 ABC transporter D1105_08260 PF00005 ABC transporter D1105_08265 PF00551 Formyl transferase D1105_08265 PF02911 Formyl transferase, C-terminal domain D1105_08275 PF01205 Uncharacterized protein family UPF0029 D1105_08275 PF09186 Domain of unknown function (DUF1949) D1105_08280 PF02386 Cation transport protein D1105_08285 PF12724 Flavodoxin domain D1105_08290 PF01741 Large-conductance mechanosensitive channel, MscL D1105_08295 PF04055 Radical SAM superfamily D1105_08300 PF03099 Biotin/lipoate A/B protein ligase family D1105_08305 PF04359 Protein of unknown function (DUF493) D1105_08310 PF07943 Penicillin-binding protein 5, C-terminal domain D1105_08310 PF00768 D-alanyl-D-alanine carboxypeptidase D1105_08315 PF03330 Lytic transglycolase D1105_08320 PF01098 Cell cycle protein D1105_08325 PF00905 Penicillin binding protein transpeptidase domain D1105_08325 PF03717 Penicillin-binding Protein dimerisation domain D1105_08330 PF02590 Predicted SPOUT methyltransferase D1105_08340 PF05190 MutS family domain IV D1105_08340 PF05188 MutS domain II D1105_08340 PF05192 MutS domain III D1105_08340 PF01624 MutS domain I D1105_08340 PF00488 MutS domain V D1105_08345 PF00005 ABC transporter D1105_08350 PF00528 Binding-protein-dependent transport system inner membrane component D1105_08355 PF03313 Serine dehydratase alpha chain D1105_08360 PF01814 Hemerythrin HHE cation binding domain D1105_08360 PF04405 Domain of Unknown function (DUF542) D1105_08365 PF00893 Small Multidrug Resistance protein D1105_08370 PF04175 Protein of unknown function (DUF406) D1105_08385 PF01774 UreD urease accessory protein D1105_08390 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1105_08395 PF01730 UreF D1105_08400 PF02814 UreE urease accessory protein, N-terminal domain D1105_08400 PF05194 UreE urease accessory protein, C-terminal domain D1105_08410 PF00449 Urease alpha-subunit, N-terminal domain D1105_08410 PF01979 Amidohydrolase family D1105_08415 PF00699 Urease beta subunit D1105_08420 PF00547 Urease, gamma subunit D1105_08430 PF00005 ABC transporter D1105_08440 PF01891 Cobalt uptake substrate-specific transmembrane region D1105_08450 PF10670 Domain of unknown function (DUF4198) D1105_08455 PF03466 LysR substrate binding domain D1105_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_08465 PF02080 TrkA-C domain D1105_08465 PF03600 Citrate transporter D1105_08470 PF05068 Mannitol repressor D1105_08475 PF01232 Mannitol dehydrogenase Rossmann domain D1105_08475 PF08125 Mannitol dehydrogenase C-terminal domain D1105_08480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1105_08480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1105_08480 PF02378 Phosphotransferase system, EIIC D1105_08485 PF01380 SIS domain D1105_08490 PF08220 DeoR-like helix-turn-helix domain D1105_08490 PF00455 DeoR C terminal sensor domain D1105_08505 PF18071 HMW1C N-terminal D1105_08505 PF18254 HMW1 domain 2 D1105_08510 PF00919 Uncharacterized protein family UPF0004 D1105_08510 PF18693 TRAM domain D1105_08510 PF04055 Radical SAM superfamily D1105_08515 PF01048 Phosphorylase superfamily D1105_08525 PF04102 SlyX D1105_08530 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1105_08530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1105_08535 PF13309 HTH domain D1105_08535 PF08348 YheO-like PAS domain D1105_08540 PF02635 DsrE/DsrF-like family D1105_08545 PF02635 DsrE/DsrF-like family D1105_08550 PF04077 DsrH like protein D1105_08580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1105_08585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1105_08585 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1105_08590 PF00231 ATP synthase D1105_08595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1105_08595 PF00306 ATP synthase alpha/beta chain, C terminal domain D1105_08595 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1105_08600 PF00213 ATP synthase delta (OSCP) subunit D1105_08605 PF00430 ATP synthase B/B' CF(0) D1105_08610 PF00137 ATP synthase subunit C D1105_08615 PF00119 ATP synthase A chain D1105_08625 PF02527 rRNA small subunit methyltransferase G D1105_08630 PF13932 GidA associated domain D1105_08630 PF01134 Glucose inhibited division protein A D1105_08640 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1105_08645 PF02810 SEC-C motif D1105_08655 PF03613 PTS system mannose/fructose/sorbose family IID component D1105_08660 PF03609 PTS system sorbose-specific iic component D1105_08665 PF03610 PTS system fructose IIA component D1105_08665 PF03830 PTS system sorbose subfamily IIB component D1105_08670 PF02447 GntP family permease D1105_08675 PF01202 Shikimate kinase D1105_08680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1105_08680 PF00356 Bacterial regulatory proteins, lacI family D1105_08685 PF00356 Bacterial regulatory proteins, lacI family D1105_08690 PF05025 RbsD / FucU transport protein family D1105_08695 PF00005 ABC transporter D1105_08700 PF02653 Branched-chain amino acid transport system / permease component D1105_08705 PF13407 Periplasmic binding protein domain D1105_08710 PF00294 pfkB family carbohydrate kinase D1105_08715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1105_08715 PF00384 Molybdopterin oxidoreductase D1105_08715 PF01568 Molydopterin dinucleotide binding domain D1105_08720 PF12800 4Fe-4S binding domain D1105_08720 PF13247 4Fe-4S dicluster domain D1105_08725 PF04976 DMSO reductase anchor subunit (DmsC) D1105_08730 PF02613 Nitrate reductase delta subunit D1105_08760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1105_08760 PF02769 AIR synthase related protein, C-terminal domain D1105_08760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1105_08765 PF00455 DeoR C terminal sensor domain D1105_08765 PF08220 DeoR-like helix-turn-helix domain D1105_08770 PF02952 L-fucose isomerase, C-terminal domain D1105_08770 PF07881 L-fucose isomerase, first N-terminal domain D1105_08770 PF07882 L-fucose isomerase, second N-terminal domain D1105_08775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1105_08775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1105_08780 PF05025 RbsD / FucU transport protein family D1105_08785 PF00596 Class II Aldolase and Adducin N-terminal domain D1105_08790 PF07690 Major Facilitator Superfamily D1105_08795 PF00465 Iron-containing alcohol dehydrogenase D1105_08800 PF07274 Protein of unknown function (DUF1440) D1105_08805 PF00528 Binding-protein-dependent transport system inner membrane component D1105_08810 PF00528 Binding-protein-dependent transport system inner membrane component D1105_08815 PF00005 ABC transporter D1105_08820 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1105_08825 PF05159 Capsule polysaccharide biosynthesis protein D1105_08830 PF05159 Capsule polysaccharide biosynthesis protein D1105_08840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1105_08845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1105_08850 PF03611 PTS system sugar-specific permease component D1105_08860 PF08220 DeoR-like helix-turn-helix domain D1105_08860 PF00455 DeoR C terminal sensor domain D1105_08865 PF01261 Xylose isomerase-like TIM barrel D1105_08870 PF00596 Class II Aldolase and Adducin N-terminal domain D1105_08880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1105_08880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1105_08900 PF04575 Protein of unknown function (DUF560) D1105_08905 PF01370 NAD dependent epimerase/dehydratase family D1105_08910 PF01327 Polypeptide deformylase D1105_08915 PF02481 DNA recombination-mediator protein A D1105_08915 PF17782 DprA winged helix domain D1105_08920 PF03169 OPT oligopeptide transporter protein D1105_08925 PF03611 PTS system sugar-specific permease component D1105_08935 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1105_08940 PF00467 KOW motif D1105_08940 PF02357 Transcription termination factor nusG D1105_08945 PF00298 Ribosomal protein L11, RNA binding domain D1105_08945 PF03946 Ribosomal protein L11, N-terminal domain D1105_08950 PF00687 Ribosomal protein L1p/L10e family D1105_08955 PF00466 Ribosomal protein L10 D1105_08960 PF00542 Ribosomal protein L7/L12 C-terminal domain D1105_08960 PF16320 Ribosomal protein L7/L12 dimerisation domain D1105_08995 PF04563 RNA polymerase beta subunit D1105_08995 PF04561 RNA polymerase Rpb2, domain 2 D1105_08995 PF04565 RNA polymerase Rpb2, domain 3 D1105_08995 PF10385 RNA polymerase beta subunit external 1 domain D1105_08995 PF04560 RNA polymerase Rpb2, domain 7 D1105_08995 PF00562 RNA polymerase Rpb2, domain 6 D1105_09000 PF00623 RNA polymerase Rpb1, domain 2 D1105_09000 PF04983 RNA polymerase Rpb1, domain 3 D1105_09000 PF05000 RNA polymerase Rpb1, domain 4 D1105_09000 PF04998 RNA polymerase Rpb1, domain 5 D1105_09000 PF04997 RNA polymerase Rpb1, domain 1 D1105_09005 PF07669 Eco57I restriction-modification methylase D1105_09005 PF02384 N-6 DNA Methylase D1105_09010 PF09226 Restriction endonuclease HincII D1105_09015 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D1105_09020 PF01850 PIN domain D1105_09040 PF10431 C-terminal, D2-small domain, of ClpB protein D1105_09040 PF07724 AAA domain (Cdc48 subfamily) D1105_09040 PF00004 ATPase family associated with various cellular activities (AAA) D1105_09045 PF00227 Proteasome subunit D1105_09050 PF17746 SfsA N-terminal OB domain D1105_09050 PF03749 Sugar fermentation stimulation protein RE domain D1105_09055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1105_09060 PF14815 NUDIX domain D1105_09060 PF00730 HhH-GPD superfamily base excision DNA repair protein D1105_09065 PF04362 Bacterial Fe(2+) trafficking D1105_09070 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1105_09070 PF01464 Transglycosylase SLT domain D1105_09100 PF03796 DnaB-like helicase C terminal domain D1105_09100 PF00772 DnaB-like helicase N terminal domain D1105_09110 PF00589 Phage integrase family D1105_09110 PF02899 Phage integrase, N-terminal SAM-like domain D1105_09135 PF00664 ABC transporter transmembrane region D1105_09135 PF03412 Peptidase C39 family D1105_09135 PF00005 ABC transporter D1105_09140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1105_09140 PF00529 HlyD membrane-fusion protein of T1SS D1105_09160 PF02978 Signal peptide binding domain D1105_09160 PF02881 SRP54-type protein, helical bundle domain D1105_09160 PF00448 SRP54-type protein, GTPase domain D1105_09165 PF00149 Calcineurin-like phosphoesterase D1105_09165 PF02872 5'-nucleotidase, C-terminal domain D1105_09170 PF01494 FAD binding domain D1105_09175 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1105_09175 PF01078 Magnesium chelatase, subunit ChlI D1105_09185 PF00561 alpha/beta hydrolase fold D1105_09190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1105_09190 PF16582 Middle domain of thiamine pyrophosphate D1105_09190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1105_09195 PF02348 Cytidylyltransferase D1105_09195 PF13472 GDSL-like Lipase/Acylhydrolase family D1105_09200 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D1105_09205 PF00480 ROK family D1105_09210 PF00701 Dihydrodipicolinate synthetase family D1105_09215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1105_09220 PF01979 Amidohydrolase family D1105_09225 PF00206 Lyase D1105_09225 PF10415 Fumarase C C-terminus D1105_09235 PF00338 Ribosomal protein S10p/S20e D1105_09240 PF00297 Ribosomal protein L3 D1105_09245 PF00573 Ribosomal protein L4/L1 family D1105_09250 PF00276 Ribosomal protein L23 D1105_09255 PF00181 Ribosomal Proteins L2, RNA binding domain D1105_09255 PF03947 Ribosomal Proteins L2, C-terminal domain D1105_09260 PF00203 Ribosomal protein S19 D1105_09265 PF00237 Ribosomal protein L22p/L17e D1105_09270 PF07650 KH domain D1105_09270 PF00189 Ribosomal protein S3, C-terminal domain D1105_09275 PF00252 Ribosomal protein L16p/L10e D1105_09280 PF00831 Ribosomal L29 protein D1105_09285 PF00366 Ribosomal protein S17 D1105_09290 PF00238 Ribosomal protein L14p/L23e D1105_09295 PF00467 KOW motif D1105_09295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1105_09300 PF00673 ribosomal L5P family C-terminus D1105_09300 PF00281 Ribosomal protein L5 D1105_09305 PF00253 Ribosomal protein S14p/S29e D1105_09310 PF00410 Ribosomal protein S8 D1105_09315 PF00347 Ribosomal protein L6 D1105_09320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1105_09325 PF00333 Ribosomal protein S5, N-terminal domain D1105_09325 PF03719 Ribosomal protein S5, C-terminal domain D1105_09330 PF00327 Ribosomal protein L30p/L7e D1105_09335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1105_09340 PF00344 SecY translocase D1105_09345 PF00444 Ribosomal protein L36 D1105_09350 PF00416 Ribosomal protein S13/S18 D1105_09355 PF00411 Ribosomal protein S11 D1105_09360 PF00163 Ribosomal protein S4/S9 N-terminal domain D1105_09360 PF01479 S4 domain D1105_09365 PF01000 RNA polymerase Rpb3/RpoA insert domain D1105_09365 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1105_09365 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1105_09370 PF01196 Ribosomal protein L17 D1105_09375 PF00886 Ribosomal protein S16 D1105_09380 PF05239 PRC-barrel domain D1105_09380 PF01782 RimM N-terminal domain D1105_09385 PF01746 tRNA (Guanine-1)-methyltransferase D1105_09390 PF01245 Ribosomal protein L19 D1105_09395 PF08007 Cupin superfamily protein D1105_09400 PF01497 Periplasmic binding protein D1105_09405 PF01032 FecCD transport family D1105_09410 PF00005 ABC transporter D1105_09415 PF00127 Copper binding proteins, plastocyanin/azurin family D1105_09430 PF02613 Nitrate reductase delta subunit D1105_09435 PF01568 Molydopterin dinucleotide binding domain D1105_09435 PF18364 Molybdopterin oxidoreductase N-terminal domain D1105_09435 PF00384 Molybdopterin oxidoreductase D1105_09445 PF02091 Glycyl-tRNA synthetase alpha subunit D1105_09455 PF05746 DALR anticodon binding domain D1105_09455 PF02092 Glycyl-tRNA synthetase beta subunit D1105_09460 PF17347 Family of unknown function (DUF5377) D1105_09465 PF02899 Phage integrase, N-terminal SAM-like domain D1105_09465 PF00589 Phage integrase family D1105_09470 PF04304 Protein of unknown function (DUF454) D1105_09480 PF00149 Calcineurin-like phosphoesterase D1105_09485 PF07509 Protein of unknown function (DUF1523) D1105_09490 PF01026 TatD related DNase D1105_09505 PF00005 ABC transporter D1105_09505 PF02687 FtsX-like permease family D1105_09505 PF12704 MacB-like periplasmic core domain D1105_09510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1105_09515 PF06629 MltA-interacting protein MipA D1105_09520 PF09115 DNA polymerase III, delta subunit, C terminal D1105_09525 PF02223 Thymidylate kinase D1105_09530 PF02618 YceG-like family D1105_09550 PF00550 Phosphopantetheine attachment site D1105_09555 PF00834 Ribulose-phosphate 3 epimerase family D1105_09560 PF01197 Ribosomal protein L31 D1105_09565 PF00444 Ribosomal protein L36 D1105_09570 PF00912 Transglycosylase D1105_09570 PF00905 Penicillin binding protein transpeptidase domain D1105_09570 PF14814 Bifunctional transglycosylase second domain D1105_09575 PF00378 Enoyl-CoA hydratase/isomerase D1105_09580 PF02824 TGS domain D1105_09580 PF04607 Region found in RelA / SpoT proteins D1105_09580 PF13291 ACT domain D1105_09585 PF01192 RNA polymerase Rpb6 D1105_09590 PF00271 Helicase conserved C-terminal domain D1105_09590 PF00270 DEAD/DEAH box helicase D1105_09590 PF17191 RecG wedge domain D1105_09605 PF03129 Anticodon binding domain D1105_09605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1105_09605 PF04073 Aminoacyl-tRNA editing domain D1105_09615 PF04542 Sigma-70 region 2 D1105_09615 PF08281 Sigma-70, region 4 D1105_09620 PF00174 Oxidoreductase molybdopterin binding domain D1105_09625 PF01794 Ferric reductase like transmembrane component D1105_09630 PF04542 Sigma-70 region 2 D1105_09630 PF00140 Sigma-70 factor, region 1.2 D1105_09630 PF04545 Sigma-70, region 4 D1105_09635 PF07690 Major Facilitator Superfamily D1105_09655 PF03590 Aspartate-ammonia ligase D1105_09660 PF01037 Lrp/AsnC ligand binding domain D1105_09660 PF13404 AsnC-type helix-turn-helix domain D1105_09665 PF01048 Phosphorylase superfamily D1105_09670 PF04345 Chorismate lyase D1105_09675 PF01177 Asp/Glu/Hydantoin racemase D1105_09705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1105_09705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1105_09710 PF00175 Oxidoreductase NAD-binding domain D1105_09710 PF00258 Flavodoxin D1105_09710 PF00667 FAD binding domain D1105_09715 PF08803 Putative mono-oxygenase ydhR D1105_09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_09720 PF03466 LysR substrate binding domain D1105_09725 PF00009 Elongation factor Tu GTP binding domain D1105_09730 PF01507 Phosphoadenosine phosphosulfate reductase family D1105_09735 PF01507 Phosphoadenosine phosphosulfate reductase family D1105_09740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1105_09740 PF10414 Sirohaem synthase dimerisation region D1105_09740 PF14824 Sirohaem biosynthesis protein central D1105_09750 PF00528 Binding-protein-dependent transport system inner membrane component D1105_09755 PF00528 Binding-protein-dependent transport system inner membrane component D1105_09760 PF00005 ABC transporter D1105_09760 PF17850 CysA C-terminal regulatory domain D1105_09760 PF12857 TOBE-like domain D1105_09765 PF01070 FMN-dependent dehydrogenase D1105_09770 PF08279 HTH domain D1105_09770 PF03099 Biotin/lipoate A/B protein ligase family D1105_09770 PF02237 Biotin protein ligase C terminal domain D1105_09775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1105_09775 PF01565 FAD binding domain D1105_09780 PF01389 OmpA-like transmembrane domain D1105_09780 PF00691 OmpA family D1105_09785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1105_09785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1105_09790 PF04403 Paraquat-inducible protein A D1105_09795 PF01841 Transglutaminase-like superfamily D1105_09805 PF00403 Heavy-metal-associated domain D1105_09810 PF00465 Iron-containing alcohol dehydrogenase D1105_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1105_09815 PF03466 LysR substrate binding domain D1105_09820 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1105_09820 PF14602 Hexapeptide repeat of succinyl-transferase D1105_09820 PF00132 Bacterial transferase hexapeptide (six repeats) D1105_09825 PF01220 Dehydroquinase class II D1105_09830 PF04488 Glycosyltransferase sugar-binding region containing DXD motif D1105_09835 PF00364 Biotin-requiring enzyme D1105_09840 PF02785 Biotin carboxylase C-terminal domain D1105_09840 PF00289 Biotin carboxylase, N-terminal domain D1105_09840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1105_09845 PF12804 MobA-like NTP transferase domain D1105_09850 PF06288 Protein of unknown function (DUF1040) D1105_09855 PF01323 DSBA-like thioredoxin domain D1105_09865 PF05036 Sporulation related domain D1105_09865 PF05036 Sporulation related domain D1105_09870 PF04445 Putative SAM-dependent methyltransferase D1105_09875 PF02557 D-alanyl-D-alanine carboxypeptidase D1105_09880 PF07687 Peptidase dimerisation domain D1105_09880 PF01546 Peptidase family M20/M25/M40 D1105_09885 PF03960 ArsC family D1105_09895 PF00809 Pterin binding enzyme D1105_09900 PF01479 S4 domain D1105_09900 PF00849 RNA pseudouridylate synthase D1105_09910 PF00924 Mechanosensitive ion channel D1105_09910 PF05552 Conserved TM helix D1105_09915 PF02785 Biotin carboxylase C-terminal domain D1105_09915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1105_09915 PF00289 Biotin carboxylase, N-terminal domain D1105_09925 PF00675 Insulinase (Peptidase family M16) D1105_09925 PF16187 Middle or third domain of peptidase_M16 D1105_09925 PF05193 Peptidase M16 inactive domain D1105_09930 PF17946 RecC C-terminal domain D1105_09955 PF07977 FabA-like domain D1105_09960 PF13654 AAA domain D1105_09960 PF05362 Lon protease (S16) C-terminal proteolytic domain D1105_09965 PF06303 MatP N-terminal domain D1105_09965 PF17414 MatP C-terminal ribbon-helix-helix domain D1105_09970 PF00579 tRNA synthetases class I (W and Y) D1105_09975 PF13419 Haloacid dehalogenase-like hydrolase D1105_09985 PF01790 Prolipoprotein diacylglyceryl transferase D1105_09990 PF01925 Sulfite exporter TauE/SafE D1105_09995 PF00293 NUDIX domain D1105_10005 PF00719 Inorganic pyrophosphatase D1105_10010 PF05175 Methyltransferase small domain D1105_10015 PF03737 Aldolase/RraA D1105_10020 PF01226 Formate/nitrite transporter D1105_10040 PF00226 DnaJ domain D1105_10040 PF01556 DnaJ C terminal domain D1105_10040 PF00684 DnaJ central domain D1105_10045 PF00012 Hsp70 protein D1105_10050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1105_10050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1105_10060 PF13407 Periplasmic binding protein domain D1105_10065 PF00005 ABC transporter D1105_10070 PF02653 Branched-chain amino acid transport system / permease component D1105_10075 PF12833 Helix-turn-helix domain D1105_10080 PF01431 Peptidase family M13 D1105_10080 PF05649 Peptidase family M13 D1105_10085 PF10571 Uncharacterised protein family UPF0547 D1105_10090 PF00474 Sodium:solute symporter family D1105_10095 PF06196 Protein of unknown function (DUF997) D1105_10100 PF01340 Met Apo-repressor, MetJ D1105_10105 PF04333 MlaA lipoprotein D1105_10110 PF01263 Aldose 1-epimerase D1105_10125 PF01522 Polysaccharide deacetylase D1105_10125 PF14883 Hypothetical glycosyl hydrolase family 13 D1105_10130 PF00535 Glycosyl transferase family 2 D1105_10140 PF00121 Triosephosphate isomerase D1105_10145 PF01142 tRNA pseudouridine synthase D (TruD) D1105_10150 PF01975 Survival protein SurE D1105_10155 PF09335 SNARE associated Golgi protein D1105_10170 PF01476 LysM domain D1105_10170 PF01551 Peptidase family M23 D1105_10175 PF03352 Methyladenine glycosylase D1105_10185 PF07670 Nucleoside recognition D1105_10190 PF07670 Nucleoside recognition D1105_10195 PF00762 Ferrochelatase D1105_10200 PF00468 Ribosomal protein L34 D1105_10205 PF00825 Ribonuclease P D1105_10210 PF01809 Putative membrane protein insertion efficiency factor D1105_10215 PF03951 Glutamine synthetase, beta-Grasp domain D1105_10215 PF00120 Glutamine synthetase, catalytic domain D1105_10220 PF00149 Calcineurin-like phosphoesterase D1105_10225 PF00293 NUDIX domain D1105_10230 PF06146 Phosphate-starvation-inducible E D1105_10235 PF01648 4'-phosphopantetheinyl transferase superfamily D1105_10240 PF00892 EamA-like transporter family D1105_10245 PF06965 Na+/H+ antiporter 1 D1105_10255 PF02580 D-Tyr-tRNA(Tyr) deacylase D1105_10260 PF03631 Virulence factor BrkB D1105_10265 PF00171 Aldehyde dehydrogenase family D1105_10285 PF08676 MutL C terminal dimerisation domain D1105_10285 PF01119 DNA mismatch repair protein, C-terminal domain D1105_10290 PF00107 Zinc-binding dehydrogenase D1105_10290 PF08240 Alcohol dehydrogenase GroES-like domain D1105_10300 PF17209 Hfq protein D1105_10305 PF13167 GTP-binding GTPase N-terminal D1105_10305 PF01926 50S ribosome-binding GTPase D1105_10305 PF16360 GTP-binding GTPase Middle Region D1105_10310 PF03641 Possible lysine decarboxylase D1105_10315 PF03819 MazG nucleotide pyrophosphohydrolase domain D1105_10320 PF13545 Crp-like helix-turn-helix domain D1105_10320 PF00027 Cyclic nucleotide-binding domain D1105_10325 PF06794 Uncharacterised protein family (UPF0270) D1105_10330 PF00440 Bacterial regulatory proteins, tetR family D1105_10335 PF00692 dUTPase D1105_10340 PF04127 DNA / pantothenate metabolism flavoprotein D1105_10340 PF02441 Flavoprotein D1105_10345 PF04002 RadC-like JAB domain D1105_10350 PF00830 Ribosomal L28 family D1105_10355 PF00471 Ribosomal protein L33 D1105_10365 PF00202 Aminotransferase class-III D1105_10370 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1105_10375 PF01206 Sulfurtransferase TusA D1105_10380 PF04143 Sulphur transport D1105_10385 PF04219 Protein of unknown function, DUF D1105_10390 PF05958 tRNA (Uracil-5-)-methyltransferase D1105_10405 PF01544 CorA-like Mg2+ transporter protein D1105_10410 PF01209 ubiE/COQ5 methyltransferase family D1105_10420 PF03109 ABC1 family D1105_10425 PF02416 mttA/Hcf106 family D1105_10435 PF00902 Sec-independent protein translocase protein (TatC) D1105_10440 PF00490 Delta-aminolevulinic acid dehydratase D1105_10450 PF06827 Zinc finger found in FPG and IleRS D1105_10450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1105_10450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1105_10455 PF05525 Branched-chain amino acid transport protein D1105_10465 PF00698 Acyl transferase domain D1105_10470 PF02677 Epoxyqueuosine reductase QueH D1105_10475 PF00348 Polyprenyl synthetase D1105_10485 PF03358 NADPH-dependent FMN reductase D1105_10490 PF07681 DoxX D1105_10495 PF00829 Ribosomal prokaryotic L21 protein D1105_10500 PF01016 Ribosomal L27 protein D1105_10505 PF00892 EamA-like transporter family D1105_10510 PF04575 Protein of unknown function (DUF560) D1105_10515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1105_10520 PF00156 Phosphoribosyl transferase domain D1105_10525 PF05175 Methyltransferase small domain D1105_10525 PF08468 Methyltransferase small domain N-terminal D1105_10535 PF00583 Acetyltransferase (GNAT) family D1105_10540 PF00271 Helicase conserved C-terminal domain D1105_10540 PF00270 DEAD/DEAH box helicase D1105_10545 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1105_10545 PF01243 Pyridoxamine 5'-phosphate oxidase D1105_10550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1105_10555 PF00171 Aldehyde dehydrogenase family D1105_10560 PF01184 GPR1/FUN34/yaaH family D1105_10565 PF00005 ABC transporter D1105_10570 PF01497 Periplasmic binding protein D1105_10575 PF01032 FecCD transport family D1105_10580 PF07715 TonB-dependent Receptor Plug Domain D1105_10580 PF00593 TonB dependent receptor D1105_10590 PF01259 SAICAR synthetase D1105_10595 PF01634 ATP phosphoribosyltransferase D1105_10595 PF08029 HisG, C-terminal domain D1105_10600 PF00815 Histidinol dehydrogenase D1105_10605 PF00155 Aminotransferase class I and II D1105_10615 PF00475 Imidazoleglycerol-phosphate dehydratase D1105_10625 PF17761 DUF1016 N-terminal domain D1105_10625 PF06250 YhcG PDDEXK nuclease domain D1105_10630 PF00117 Glutamine amidotransferase class-I D1105_10635 PF00977 Histidine biosynthesis protein D1105_10640 PF00977 Histidine biosynthesis protein D1105_10645 PF01502 Phosphoribosyl-AMP cyclohydrolase D1105_10645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1105_10650 PF02592 Putative vitamin uptake transporter D1105_10655 PF00557 Metallopeptidase family M24 D1105_10665 PF00356 Bacterial regulatory proteins, lacI family D1105_10665 PF13407 Periplasmic binding protein domain D1105_10670 PF08244 Glycosyl hydrolases family 32 C terminal D1105_10670 PF00251 Glycosyl hydrolases family 32 N-terminal domain D1105_10675 PF00294 pfkB family carbohydrate kinase D1105_10680 PF07732 Multicopper oxidase D1105_10685 PF02687 FtsX-like permease family D1105_10685 PF12704 MacB-like periplasmic core domain D1105_10690 PF00005 ABC transporter D1105_10695 PF02687 FtsX-like permease family D1105_10695 PF12704 MacB-like periplasmic core domain D1105_10700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1105_10700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1105_10705 PF00793 DAHP synthetase I family D1105_10710 PF13369 Transglutaminase-like superfamily D1105_10715 PF13847 Methyltransferase domain D1105_10715 PF17827 PrmC N-terminal domain D1105_10725 PF03462 PCRF domain D1105_10725 PF00472 RF-1 domain