locus-tag class description IOD66_00005 PF00308 Bacterial dnaA protein IOD66_00005 PF08299 Bacterial dnaA protein helix-turn-helix IOD66_00005 PF11638 DnaA N-terminal domain IOD66_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IOD66_00010 PF02767 DNA polymerase III beta subunit, central domain IOD66_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IOD66_00015 PF02463 RecF/RecN/SMC N terminal domain IOD66_00020 PF00080 Copper/zinc superoxide dismutase (SODC) IOD66_00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain IOD66_00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain IOD66_00035 PF02684 Lipid-A-disaccharide synthetase IOD66_00040 PF01343 Peptidase family S49 IOD66_00040 PF08496 Peptidase family S49 N-terminal IOD66_00045 PF02381 MraZ protein, putative antitoxin-like IOD66_00050 PF01795 MraW methylase family IOD66_00055 PF04999 Cell division protein FtsL IOD66_00060 PF03717 Penicillin-binding Protein dimerisation domain IOD66_00060 PF00905 Penicillin binding protein transpeptidase domain IOD66_00065 PF01225 Mur ligase family, catalytic domain IOD66_00065 PF02875 Mur ligase family, glutamate ligase domain IOD66_00065 PF08245 Mur ligase middle domain IOD66_00070 PF01225 Mur ligase family, catalytic domain IOD66_00070 PF02875 Mur ligase family, glutamate ligase domain IOD66_00070 PF08245 Mur ligase middle domain IOD66_00075 PF00953 Glycosyl transferase family 4 IOD66_00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IOD66_00080 PF02875 Mur ligase family, glutamate ligase domain IOD66_00080 PF08245 Mur ligase middle domain IOD66_00085 PF01098 Cell cycle protein IOD66_00090 PF03033 Glycosyltransferase family 28 N-terminal domain IOD66_00090 PF04101 Glycosyltransferase family 28 C-terminal domain IOD66_00095 PF01225 Mur ligase family, catalytic domain IOD66_00095 PF02875 Mur ligase family, glutamate ligase domain IOD66_00095 PF08245 Mur ligase middle domain IOD66_00100 PF07478 D-ala D-ala ligase C-terminus IOD66_00100 PF01820 D-ala D-ala ligase N-terminus IOD66_00105 PF03799 Cell division protein FtsQ IOD66_00105 PF08478 POTRA domain, FtsQ-type IOD66_00110 PF02491 SHS2 domain inserted in FTSA IOD66_00115 PF12327 FtsZ family, C-terminal domain IOD66_00115 PF00091 Tubulin/FtsZ family, GTPase domain IOD66_00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IOD66_00125 PF02463 RecF/RecN/SMC N terminal domain IOD66_00130 PF00005 ABC transporter IOD66_00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IOD66_00135 PF12911 N-terminal TM domain of oligopeptide transport permease C IOD66_00135 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_00140 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD66_00150 PF00009 Elongation factor Tu GTP binding domain IOD66_00150 PF03144 Elongation factor Tu domain 2 IOD66_00150 PF16658 Class II release factor RF3, C-terminal domain IOD66_00155 PF01381 Helix-turn-helix IOD66_00155 PF00717 Peptidase S24-like IOD66_00200 PF06122 Conjugative relaxosome accessory transposon protein IOD66_00210 PF00589 Phage integrase family IOD66_00210 PF13495 Phage integrase, N-terminal SAM-like domain IOD66_00215 PF00186 Dihydrofolate reductase IOD66_00240 PF12833 Helix-turn-helix domain IOD66_00265 PF04002 RadC-like JAB domain IOD66_00270 PF00092 von Willebrand factor type A domain IOD66_00290 PF07728 AAA domain (dynein-related subfamily) IOD66_00310 PF00436 Single-strand binding protein family IOD66_00325 PF13411 MerR HTH family regulatory protein IOD66_00335 PF01252 Signal peptidase (SPase) II IOD66_00345 PF13427 Domain of unknown function (DUF4111) IOD66_00350 PF05139 Erythromycin esterase IOD66_00355 PF00186 Dihydrofolate reductase IOD66_00380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD66_00395 PF13610 DDE domain IOD66_00405 PF00440 Bacterial regulatory proteins, tetR family IOD66_00405 PF02909 Tetracyclin repressor-like, C-terminal domain IOD66_00410 PF07690 Major Facilitator Superfamily IOD66_00425 PF00589 Phage integrase family IOD66_00430 PF13411 MerR HTH family regulatory protein IOD66_00440 PF01252 Signal peptidase (SPase) II IOD66_00450 PF04231 Endonuclease I IOD66_00465 PF06986 Type-1V conjugative transfer system mating pair stabilisation IOD66_00470 PF06834 TraU protein IOD66_00480 PF10502 Signal peptidase, peptidase S26 IOD66_00495 PF10411 Disulfide bond isomerase protein N-terminus IOD66_00495 PF13098 Thioredoxin-like domain IOD66_00545 PF01695 IstB-like ATP binding protein IOD66_00560 PF00665 Integrase core domain IOD66_00605 PF12102 Domain of unknown function (DUF3578) IOD66_00605 PF07728 AAA domain (dynein-related subfamily) IOD66_00610 PF11867 Domain of unknown function (DUF3387) IOD66_00610 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IOD66_00610 PF18766 SWI2/SNF2 ATPase IOD66_00625 PF02384 N-6 DNA Methylase IOD66_00650 PF00717 Peptidase S24-like IOD66_00665 PF00809 Pterin binding enzyme IOD66_00670 PF01636 Phosphotransferase enzyme family IOD66_00675 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IOD66_00685 PF03466 LysR substrate binding domain IOD66_00685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_00690 PF07690 Major Facilitator Superfamily IOD66_00705 PF00186 Dihydrofolate reductase IOD66_00710 PF13427 Domain of unknown function (DUF4111) IOD66_00710 PF01909 Nucleotidyltransferase domain IOD66_00715 PF00132 Bacterial transferase hexapeptide (six repeats) IOD66_00725 PF13495 Phage integrase, N-terminal SAM-like domain IOD66_00725 PF00589 Phage integrase family IOD66_00735 PF00398 Ribosomal RNA adenine dimethylase IOD66_00795 PF01195 Peptidyl-tRNA hydrolase IOD66_00800 PF06071 Protein of unknown function (DUF933) IOD66_00800 PF01926 50S ribosome-binding GTPase IOD66_00815 PF05433 Glycine zipper 2TM domain IOD66_00820 PF06185 YecM protein IOD66_00825 PF00750 tRNA synthetases class I (R) IOD66_00825 PF05746 DALR anticodon binding domain IOD66_00825 PF03485 Arginyl tRNA synthetase N terminal domain IOD66_00830 PF01926 50S ribosome-binding GTPase IOD66_00830 PF01018 GTP1/OBG IOD66_00835 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) IOD66_00840 PF00588 SpoU rRNA Methylase family IOD66_00840 PF08032 RNA 2'-O ribose methyltransferase substrate binding IOD66_00845 PF13091 PLD-like domain IOD66_00850 PF06827 Zinc finger found in FPG and IleRS IOD66_00850 PF00133 tRNA synthetases class I (I, L, M and V) IOD66_00850 PF08264 Anticodon-binding domain of tRNA IOD66_00855 PF01687 Riboflavin kinase IOD66_00855 PF06574 FAD synthetase IOD66_00860 PF01467 Cytidylyltransferase-like IOD66_00860 PF13521 AAA domain IOD66_00865 PF00149 Calcineurin-like phosphoesterase IOD66_00870 PF00486 Transcriptional regulatory protein, C terminal IOD66_00870 PF00072 Response regulator receiver domain IOD66_00890 PF01168 Alanine racemase, N-terminal domain IOD66_00895 PF00679 Elongation factor G C-terminus IOD66_00895 PF00009 Elongation factor Tu GTP binding domain IOD66_00895 PF03144 Elongation factor Tu domain 2 IOD66_00900 PF00462 Glutaredoxin IOD66_00905 PF01138 3' exoribonuclease family, domain 1 IOD66_00905 PF03725 3' exoribonuclease family, domain 2 IOD66_00910 PF08340 Domain of unknown function (DUF1732) IOD66_00910 PF03755 YicC-like family, N-terminal region IOD66_00915 PF01571 Aminomethyltransferase folate-binding domain IOD66_00920 PF00037 4Fe-4S binding domain IOD66_00925 PF00196 Bacterial regulatory proteins, luxR family IOD66_00925 PF00072 Response regulator receiver domain IOD66_00930 PF01170 Putative RNA methylase family UPF0020 IOD66_00930 PF02926 THUMP domain IOD66_00930 PF10672 S-adenosylmethionine-dependent methyltransferase IOD66_00935 PF00588 SpoU rRNA Methylase family IOD66_00940 PF00923 Transaldolase/Fructose-6-phosphate aldolase IOD66_00970 PF00308 Bacterial dnaA protein IOD66_00975 PF00005 ABC transporter IOD66_00980 PF03379 CcmB protein IOD66_00985 PF01578 Cytochrome C assembly protein IOD66_00990 PF04995 Heme exporter protein D (CcmD) IOD66_00995 PF03100 CcmE IOD66_01000 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IOD66_01000 PF01578 Cytochrome C assembly protein IOD66_01020 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD66_01020 PF01464 Transglycosylase SLT domain IOD66_01030 PF04972 BON domain IOD66_01035 PF13580 SIS domain IOD66_01040 PF02021 Uncharacterised protein family UPF0102 IOD66_01045 PF04348 LppC putative lipoprotein IOD66_01050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IOD66_01055 PF04315 Elongation factor P hydroxylase IOD66_01060 PF02683 Cytochrome C biogenesis protein transmembrane region IOD66_01060 PF13098 Thioredoxin-like domain IOD66_01060 PF11412 Disulphide bond corrector protein DsbC IOD66_01070 PF01381 Helix-turn-helix IOD66_01075 PF01699 Sodium/calcium exchanger protein IOD66_01080 PF01161 Phosphatidylethanolamine-binding protein IOD66_01085 PF00005 ABC transporter IOD66_01090 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD66_01095 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_01100 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_01105 PF03848 Tellurite resistance protein TehB IOD66_01105 PF09313 Domain of unknown function (DUF1971) IOD66_01110 PF01613 Flavin reductase like domain IOD66_01115 PF04269 Protein of unknown function, DUF440 IOD66_01125 PF00448 SRP54-type protein, GTPase domain IOD66_01125 PF02881 SRP54-type protein, helical bundle domain IOD66_01130 PF00005 ABC transporter IOD66_01135 PF18075 FtsX extracellular domain IOD66_01140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IOD66_01140 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IOD66_01145 PF02152 Dihydroneopterin aldolase IOD66_01150 PF02660 Glycerol-3-phosphate acyltransferase IOD66_01155 PF01433 Peptidase family M1 domain IOD66_01155 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IOD66_01155 PF11940 Domain of unknown function (DUF3458) Ig-like fold IOD66_01160 PF17757 UvrB interaction domain IOD66_01160 PF03461 TRCF domain IOD66_01160 PF00271 Helicase conserved C-terminal domain IOD66_01160 PF00270 DEAD/DEAH box helicase IOD66_01160 PF02559 CarD-like/TRCF domain IOD66_01200 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IOD66_01205 PF01455 HupF/HypC family IOD66_01210 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE IOD66_01215 PF01750 Hydrogenase maturation protease IOD66_01220 PF00374 Nickel-dependent hydrogenase IOD66_01225 PF03916 Polysulphide reductase, NrfD IOD66_01230 PF13247 4Fe-4S dicluster domain IOD66_01235 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal IOD66_01235 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IOD66_01240 PF17788 HypF Kae1-like domain IOD66_01240 PF01300 Telomere recombination IOD66_01240 PF07503 HypF finger IOD66_01240 PF00708 Acylphosphatase IOD66_01245 PF00586 AIR synthase related protein, N-terminal domain IOD66_01245 PF02769 AIR synthase related protein, C-terminal domain IOD66_01250 PF01924 Hydrogenase formation hypA family IOD66_01255 PF02492 CobW/HypB/UreG, nucleotide-binding domain IOD66_01260 PF13361 UvrD-like helicase C-terminal domain IOD66_01260 PF00580 UvrD/REP helicase N-terminal domain IOD66_01265 PF00919 Uncharacterized protein family UPF0004 IOD66_01265 PF01938 TRAM domain IOD66_01265 PF04055 Radical SAM superfamily IOD66_01270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IOD66_01275 PF00391 PEP-utilising enzyme, mobile domain IOD66_01275 PF05524 PEP-utilising enzyme, N-terminal IOD66_01275 PF02896 PEP-utilising enzyme, TIM barrel domain IOD66_01280 PF00381 PTS HPr component phosphorylation site IOD66_01285 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_01290 PF00005 ABC transporter IOD66_01295 PF00367 phosphotransferase system, EIIB IOD66_01295 PF02378 Phosphotransferase system, EIIC IOD66_01300 PF00696 Amino acid kinase family IOD66_01305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IOD66_01305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IOD66_01310 PF03605 Anaerobic c4-dicarboxylate membrane transporter IOD66_01315 PF01430 Hsp33 protein IOD66_01320 PF01479 S4 domain IOD66_01325 PF00293 NUDIX domain IOD66_01330 PF00459 Inositol monophosphatase family IOD66_01335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IOD66_01335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IOD66_01340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IOD66_01345 PF07690 Major Facilitator Superfamily IOD66_01355 PF17761 DUF1016 N-terminal domain IOD66_01355 PF06250 YhcG PDDEXK nuclease domain IOD66_01365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IOD66_01365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IOD66_01380 PF04354 ZipA, C-terminal FtsZ-binding domain IOD66_01385 PF01653 NAD-dependent DNA ligase adenylation domain IOD66_01385 PF03120 NAD-dependent DNA ligase OB-fold domain IOD66_01385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IOD66_01385 PF12826 Helix-hairpin-helix motif IOD66_01385 PF00533 BRCA1 C Terminus (BRCT) domain IOD66_01390 PF01370 NAD dependent epimerase/dehydratase family IOD66_01395 PF07690 Major Facilitator Superfamily IOD66_01405 PF05191 Adenylate kinase, active site lid IOD66_01415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IOD66_01415 PF00056 lactate/malate dehydrogenase, NAD binding domain IOD66_01420 PF02863 Arginine repressor, C-terminal domain IOD66_01420 PF01316 Arginine repressor, DNA binding domain IOD66_01425 PF01370 NAD dependent epimerase/dehydratase family IOD66_01425 PF08338 Domain of unknown function (DUF1731) IOD66_01430 PF00595 PDZ domain IOD66_01435 PF00005 ABC transporter IOD66_01440 PF02405 Permease MlaE IOD66_01445 PF02470 MlaD protein IOD66_01450 PF05494 MlaC protein IOD66_01460 PF01722 BolA-like protein IOD66_01465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IOD66_01480 PF02627 Carboxymuconolactone decarboxylase family IOD66_01485 PF00005 ABC transporter IOD66_01485 PF12848 ABC transporter IOD66_01490 PF00929 Exonuclease IOD66_01505 PF02657 Fe-S metabolism associated domain IOD66_01510 PF00574 Clp protease IOD66_01515 PF06689 ClpX C4-type zinc finger IOD66_01515 PF10431 C-terminal, D2-small domain, of ClpB protein IOD66_01515 PF07724 AAA domain (Cdc48 subfamily) IOD66_01520 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IOD66_01525 PF03966 Trm112p-like protein IOD66_01530 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IOD66_01535 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IOD66_01545 PF00749 tRNA synthetases class I (E and Q), catalytic domain IOD66_01570 PF04055 Radical SAM superfamily IOD66_01580 PF17674 HHH domain IOD66_01580 PF00575 S1 RNA binding domain IOD66_01580 PF09371 Tex-like protein N-terminal domain IOD66_01580 PF16921 Tex protein YqgF-like domain IOD66_01585 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD66_01590 PF17283 SprT-like zinc ribbon domain IOD66_01590 PF10263 SprT-like family IOD66_01595 PF00445 Ribonuclease T2 family IOD66_01600 PF01343 Peptidase family S49 IOD66_01605 PF00881 Nitroreductase family IOD66_01610 PF00106 short chain dehydrogenase IOD66_01620 PF00403 Heavy-metal-associated domain IOD66_01630 PF00376 MerR family regulatory protein IOD66_01630 PF09278 MerR, DNA binding IOD66_01635 PF12849 PBP superfamily domain IOD66_01640 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_01645 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_01650 PF00005 ABC transporter IOD66_01655 PF00486 Transcriptional regulatory protein, C terminal IOD66_01655 PF00072 Response regulator receiver domain IOD66_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD66_01660 PF00512 His Kinase A (phospho-acceptor) domain IOD66_01665 PF01751 Toprim domain IOD66_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD66_01665 PF00986 DNA gyrase B subunit, carboxyl terminus IOD66_01665 PF00204 DNA gyrase B IOD66_01670 PF00939 Sodium:sulfate symporter transmembrane region IOD66_01675 PF00939 Sodium:sulfate symporter transmembrane region IOD66_01680 PF00939 Sodium:sulfate symporter transmembrane region IOD66_01685 PF00162 Phosphoglycerate kinase IOD66_01690 PF01116 Fructose-bisphosphate aldolase class-II IOD66_01695 PF00005 ABC transporter IOD66_01710 PF00881 Nitroreductase family IOD66_01715 PF03350 Uncharacterized protein family, UPF0114 IOD66_01725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IOD66_01725 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD66_01730 PF01026 TatD related DNase IOD66_01735 PF02554 Carbon starvation protein CstA IOD66_01740 PF02446 4-alpha-glucanotransferase IOD66_01745 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_01750 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_01750 PF14785 Maltose transport system permease protein MalF P2 domain IOD66_01755 PF01547 Bacterial extracellular solute-binding protein IOD66_01760 PF00005 ABC transporter IOD66_01760 PF17912 MalK OB fold domain IOD66_01765 PF02264 LamB porin IOD66_01770 PF07148 Maltose operon periplasmic protein precursor (MalM) IOD66_01775 PF17874 MalT-like TPR region IOD66_01775 PF00196 Bacterial regulatory proteins, luxR family IOD66_01780 PF00343 Carbohydrate phosphorylase IOD66_01790 PF04461 Protein of unknown function (DUF520) IOD66_01795 PF18429 Domain of unknown function (DUF5609) IOD66_01800 PF10144 Bacterial virulence factor haemolysin IOD66_01805 PF01176 Translation initiation factor 1A / IF-1 IOD66_01820 PF02635 DsrE/DsrF-like family IOD66_01825 PF00860 Permease family IOD66_01835 PF04073 Aminoacyl-tRNA editing domain IOD66_01840 PF01402 Ribbon-helix-helix protein, copG family IOD66_01845 PF00258 Flavodoxin IOD66_01850 PF01475 Ferric uptake regulator family IOD66_01855 PF02470 MlaD protein IOD66_01860 PF02664 S-Ribosylhomocysteinase (LuxS) IOD66_01865 PF00664 ABC transporter transmembrane region IOD66_01865 PF00005 ABC transporter IOD66_01880 PF13419 Haloacid dehalogenase-like hydrolase IOD66_01885 PF03595 Voltage-dependent anion channel IOD66_01900 PF02028 BCCT, betaine/carnitine/choline family transporter IOD66_01905 PF08240 Alcohol dehydrogenase GroES-like domain IOD66_01905 PF00107 Zinc-binding dehydrogenase IOD66_01920 PF02798 Glutathione S-transferase, N-terminal domain IOD66_01925 PF00756 Putative esterase IOD66_01935 PF00145 C-5 cytosine-specific DNA methylase IOD66_01945 PF03852 DNA mismatch endonuclease Vsr IOD66_01950 PF01914 MarC family integral membrane protein IOD66_01955 PF00881 Nitroreductase family IOD66_01960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IOD66_01960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IOD66_01965 PF11867 Domain of unknown function (DUF3387) IOD66_01965 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IOD66_01965 PF18766 SWI2/SNF2 ATPase IOD66_01985 PF00296 Luciferase-like monooxygenase IOD66_01990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD66_01995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_01995 PF03466 LysR substrate binding domain IOD66_02015 PF03466 LysR substrate binding domain IOD66_02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_02035 PF13173 AAA domain IOD66_02035 PF13635 Domain of unknown function (DUF4143) IOD66_02040 PF00999 Sodium/hydrogen exchanger family IOD66_02040 PF02254 TrkA-N domain IOD66_02045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IOD66_02045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IOD66_02050 PF00206 Lyase IOD66_02050 PF14698 Argininosuccinate lyase C-terminal IOD66_02055 PF00916 Sulfate permease family IOD66_02055 PF01740 STAS domain IOD66_02060 PF13464 Domain of unknown function (DUF4115) IOD66_02065 PF04551 GcpE protein IOD66_02070 PF03129 Anticodon binding domain IOD66_02070 PF13393 Histidyl-tRNA synthetase IOD66_02075 PF09976 Tetratricopeptide repeat-like domain IOD66_02080 PF04973 Nicotinamide mononucleotide transporter IOD66_02085 PF02843 Phosphoribosylglycinamide synthetase, C domain IOD66_02085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IOD66_02085 PF02844 Phosphoribosylglycinamide synthetase, N domain IOD66_02090 PF01250 Ribosomal protein S6 IOD66_02095 PF00436 Single-strand binding protein family IOD66_02100 PF01084 Ribosomal protein S18 IOD66_02105 PF01281 Ribosomal protein L9, N-terminal domain IOD66_02105 PF03948 Ribosomal protein L9, C-terminal domain IOD66_02110 PF04325 Protein of unknown function (DUF465) IOD66_02115 PF16036 Chalcone isomerase-like IOD66_02120 PF08241 Methyltransferase domain IOD66_02125 PF02885 Glycosyl transferase family, helical bundle domain IOD66_02125 PF00591 Glycosyl transferase family, a/b domain IOD66_02130 PF00117 Glutamine amidotransferase class-I IOD66_02135 PF04715 Anthranilate synthase component I, N terminal region IOD66_02135 PF00425 chorismate binding enzyme IOD66_02140 PF04261 Dyp-type peroxidase family IOD66_02150 PF01300 Telomere recombination IOD66_02155 PF01479 S4 domain IOD66_02155 PF00849 RNA pseudouridylate synthase IOD66_02165 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B IOD66_02170 PF03466 LysR substrate binding domain IOD66_02170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_02180 PF08267 Cobalamin-independent synthase, N-terminal domain IOD66_02180 PF01717 Cobalamin-independent synthase, Catalytic domain IOD66_02185 PF00675 Insulinase (Peptidase family M16) IOD66_02185 PF05193 Peptidase M16 inactive domain IOD66_02190 PF02075 Crossover junction endodeoxyribonuclease RuvC IOD66_02200 PF01709 Transcriptional regulator IOD66_02205 PF00293 NUDIX domain IOD66_02210 PF01336 OB-fold nucleic acid binding domain IOD66_02210 PF00152 tRNA synthetases class II (D, K and N) IOD66_02210 PF02938 GAD domain IOD66_02215 PF03625 Domain of unknown function DUF302 IOD66_02215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IOD66_02220 PF00117 Glutamine amidotransferase class-I IOD66_02225 PF02646 RmuC family IOD66_02225 PF02646 RmuC family IOD66_02230 PF00425 chorismate binding enzyme IOD66_02235 PF01063 Amino-transferase class IV IOD66_02240 PF00154 recA bacterial DNA recombination protein IOD66_02245 PF02631 RecX family IOD66_02250 PF04266 ASCH domain IOD66_02255 PF01396 Topoisomerase DNA binding C4 zinc finger IOD66_02260 PF01300 Telomere recombination IOD66_02265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IOD66_02265 PF08501 Shikimate dehydrogenase substrate binding domain IOD66_02265 PF01488 Shikimate / quinate 5-dehydrogenase IOD66_02290 PF04380 Membrane fusogenic activity IOD66_02295 PF00342 Phosphoglucose isomerase IOD66_02300 PF01520 N-acetylmuramoyl-L-alanine amidase IOD66_02300 PF01476 LysM domain IOD66_02305 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IOD66_02310 PF00929 Exonuclease IOD66_02315 PF01467 Cytidylyltransferase-like IOD66_02320 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IOD66_02320 PF00534 Glycosyl transferases group 1 IOD66_02325 PF04932 O-Antigen ligase IOD66_02330 PF16325 Peptidase family U32 C-terminal domain IOD66_02330 PF01136 Peptidase family U32 IOD66_02340 PF01594 AI-2E family transporter IOD66_02345 PF01235 Sodium:alanine symporter family IOD66_02350 PF00565 Staphylococcal nuclease homologue IOD66_02355 PF00266 Aminotransferase class-V IOD66_02360 PF00365 Phosphofructokinase IOD66_02365 PF14256 YwiC-like protein IOD66_02370 PF01479 S4 domain IOD66_02370 PF00849 RNA pseudouridylate synthase IOD66_02375 PF13525 Outer membrane lipoprotein IOD66_02380 PF00814 Glycoprotease family IOD66_02385 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) IOD66_02390 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) IOD66_02395 PF01491 Frataxin-like domain IOD66_02400 PF00271 Helicase conserved C-terminal domain IOD66_02400 PF00570 HRDC domain IOD66_02400 PF16124 RecQ zinc-binding IOD66_02400 PF09382 RQC domain IOD66_02400 PF00270 DEAD/DEAH box helicase IOD66_02405 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) IOD66_02410 PF00293 NUDIX domain IOD66_02415 PF03952 Enolase, N-terminal domain IOD66_02415 PF00113 Enolase, C-terminal TIM barrel domain IOD66_02420 PF05958 tRNA (Uracil-5-)-methyltransferase IOD66_02425 PF00933 Glycosyl hydrolase family 3 N terminal domain IOD66_02430 PF03741 Integral membrane protein TerC family IOD66_02435 PF02976 DNA mismatch repair enzyme MutH IOD66_02440 PF01726 LexA DNA binding domain IOD66_02440 PF00717 Peptidase S24-like IOD66_02445 PF01553 Acyltransferase IOD66_02450 PF02222 ATP-grasp domain IOD66_02450 PF01370 NAD dependent epimerase/dehydratase family IOD66_02455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IOD66_02455 PF14579 Helix-hairpin-helix motif IOD66_02455 PF02811 PHP domain IOD66_02455 PF01336 OB-fold nucleic acid binding domain IOD66_02455 PF07733 Bacterial DNA polymerase III alpha NTPase domain IOD66_02460 PF03739 Lipopolysaccharide export system permease LptF/LptG IOD66_02465 PF03739 Lipopolysaccharide export system permease LptF/LptG IOD66_02475 PF02789 Cytosol aminopeptidase family, N-terminal domain IOD66_02475 PF00883 Cytosol aminopeptidase family, catalytic domain IOD66_02490 PF04055 Radical SAM superfamily IOD66_02495 PF01242 6-pyruvoyl tetrahydropterin synthase IOD66_02500 PF06508 Queuosine biosynthesis protein QueC IOD66_02505 PF00746 LPXTG cell wall anchor motif IOD66_02505 PF07501 G5 domain IOD66_02505 PF04650 YSIRK type signal peptide IOD66_02505 PF00728 Glycosyl hydrolase family 20, catalytic domain IOD66_02510 PF00586 AIR synthase related protein, N-terminal domain IOD66_02510 PF02769 AIR synthase related protein, C-terminal domain IOD66_02515 PF00392 Bacterial regulatory proteins, gntR family IOD66_02515 PF00155 Aminotransferase class I and II IOD66_02530 PF00206 Lyase IOD66_02530 PF10415 Fumarase C C-terminus IOD66_02540 PF03960 ArsC family IOD66_02545 PF01758 Sodium Bile acid symporter family IOD66_02550 PF10431 C-terminal, D2-small domain, of ClpB protein IOD66_02550 PF00004 ATPase family associated with various cellular activities (AAA) IOD66_02550 PF07724 AAA domain (Cdc48 subfamily) IOD66_02550 PF17871 AAA lid domain IOD66_02550 PF02861 Clp amino terminal domain, pathogenicity island component IOD66_02555 PF03922 OmpW family IOD66_02560 PF01546 Peptidase family M20/M25/M40 IOD66_02560 PF07687 Peptidase dimerisation domain IOD66_02570 PF13520 Amino acid permease IOD66_02575 PF13520 Amino acid permease IOD66_02585 PF02773 S-adenosylmethionine synthetase, C-terminal domain IOD66_02585 PF02772 S-adenosylmethionine synthetase, central domain IOD66_02585 PF00438 S-adenosylmethionine synthetase, N-terminal domain IOD66_02590 PF00860 Permease family IOD66_02595 PF00085 Thioredoxin IOD66_02600 PF01145 SPFH domain / Band 7 family IOD66_02605 PF01145 SPFH domain / Band 7 family IOD66_02610 PF00709 Adenylosuccinate synthetase IOD66_02615 PF02568 Thiamine biosynthesis protein (ThiI) IOD66_02615 PF02926 THUMP domain IOD66_02625 PF02545 Maf-like protein IOD66_02630 PF00860 Permease family IOD66_02635 PF00210 Ferritin-like domain IOD66_02640 PF00210 Ferritin-like domain IOD66_02645 PF07549 SecD/SecF GG Motif IOD66_02645 PF02355 Protein export membrane protein IOD66_02650 PF13721 SecD export protein N-terminal TM region IOD66_02650 PF02355 Protein export membrane protein IOD66_02650 PF07549 SecD/SecF GG Motif IOD66_02655 PF02699 Preprotein translocase subunit IOD66_02660 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IOD66_02665 PF00512 His Kinase A (phospho-acceptor) domain IOD66_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD66_02665 PF08521 Two-component sensor kinase N-terminal IOD66_02670 PF00486 Transcriptional regulatory protein, C terminal IOD66_02670 PF00072 Response regulator receiver domain IOD66_02685 PF04076 Bacterial OB fold (BOF) protein IOD66_02695 PF02801 Beta-ketoacyl synthase, C-terminal domain IOD66_02695 PF00109 Beta-ketoacyl synthase, N-terminal domain IOD66_02700 PF01295 Adenylate cyclase, class-I IOD66_02700 PF12633 Adenylate cyclase NT domain IOD66_02705 PF00999 Sodium/hydrogen exchanger family IOD66_02705 PF02254 TrkA-N domain IOD66_02710 PF01578 Cytochrome C assembly protein IOD66_02710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IOD66_02715 PF08534 Redoxin IOD66_02720 PF03918 Cytochrome C biogenesis protein IOD66_02730 PF01243 Pyridoxamine 5'-phosphate oxidase IOD66_02735 PF07715 TonB-dependent Receptor Plug Domain IOD66_02735 PF04886 PT repeat IOD66_02735 PF00593 TonB dependent receptor IOD66_02740 PF01810 LysE type translocator IOD66_02745 PF00892 EamA-like transporter family IOD66_02750 PF00892 EamA-like transporter family IOD66_02755 PF00155 Aminotransferase class I and II IOD66_02760 PF00425 chorismate binding enzyme IOD66_02765 PF03956 Lysine exporter LysO IOD66_02770 PF11799 impB/mucB/samB family C-terminal domain IOD66_02770 PF11798 IMS family HHH motif IOD66_02770 PF00817 impB/mucB/samB family IOD66_02775 PF01435 Peptidase family M48 IOD66_02785 PF01226 Formate/nitrite transporter IOD66_02790 PF02901 Pyruvate formate lyase-like IOD66_02790 PF01228 Glycine radical IOD66_02795 PF04055 Radical SAM superfamily IOD66_02800 PF01432 Peptidase family M3 IOD66_02805 PF00800 Prephenate dehydratase IOD66_02805 PF01817 Chorismate mutase type II IOD66_02810 PF00271 Helicase conserved C-terminal domain IOD66_02810 PF00270 DEAD/DEAH box helicase IOD66_02810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IOD66_02810 PF18074 Primosomal protein N C-terminal domain IOD66_02810 PF17764 3′ DNA-binding domain (3′BD) IOD66_02815 PF02698 DUF218 domain IOD66_02820 PF04230 Polysaccharide pyruvyl transferase IOD66_02830 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) IOD66_02840 PF00535 Glycosyl transferase family 2 IOD66_02845 PF00535 Glycosyl transferase family 2 IOD66_02850 PF01641 SelR domain IOD66_02850 PF01625 Peptide methionine sulfoxide reductase IOD66_02860 PF00392 Bacterial regulatory proteins, gntR family IOD66_02860 PF07729 FCD domain IOD66_02865 PF17137 Domain of unknown function (DUF5110) IOD66_02865 PF13802 Galactose mutarotase-like IOD66_02865 PF01055 Glycosyl hydrolases family 31 IOD66_02865 PF16338 Domain of unknown function (DUF4968) IOD66_02870 PF02614 Glucuronate isomerase IOD66_02875 PF00294 pfkB family carbohydrate kinase IOD66_02880 PF01081 KDPG and KHG aldolase IOD66_02890 PF07670 Nucleoside recognition IOD66_02890 PF07662 Na+ dependent nucleoside transporter C-terminus IOD66_02890 PF01773 Na+ dependent nucleoside transporter N-terminus IOD66_02895 PF01791 DeoC/LacD family aldolase IOD66_02900 PF01048 Phosphorylase superfamily IOD66_02905 PF00166 Chaperonin 10 Kd subunit IOD66_02910 PF00118 TCP-1/cpn60 chaperonin family IOD66_02915 PF00465 Iron-containing alcohol dehydrogenase IOD66_02915 PF00171 Aldehyde dehydrogenase family IOD66_02920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IOD66_02920 PF03900 Porphobilinogen deaminase, C-terminal domain IOD66_02925 PF02602 Uroporphyrinogen-III synthase HemD IOD66_02930 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IOD66_02935 PF07219 HemY protein N-terminus IOD66_02940 PF05661 Protein of unknown function (DUF808) IOD66_02945 PF00312 Ribosomal protein S15 IOD66_02950 PF00999 Sodium/hydrogen exchanger family IOD66_02955 PF13145 PPIC-type PPIASE domain IOD66_02960 PF01914 MarC family integral membrane protein IOD66_02970 PF10609 NUBPL iron-transfer P-loop NTPase IOD66_02980 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IOD66_02980 PF06594 Haemolysin-type calcium binding protein related domain IOD66_02985 PF02929 Beta galactosidase small chain IOD66_02985 PF02837 Glycosyl hydrolases family 2, sugar binding domain IOD66_02985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IOD66_02985 PF00703 Glycosyl hydrolases family 2 IOD66_02985 PF16353 Domain of unknown function(DUF4981) IOD66_02990 PF01263 Aldose 1-epimerase IOD66_02995 PF00288 GHMP kinases N terminal domain IOD66_02995 PF10509 Galactokinase galactose-binding signature IOD66_02995 PF08544 GHMP kinases C terminal IOD66_03000 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IOD66_03000 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IOD66_03005 PF00268 Ribonucleotide reductase, small chain IOD66_03010 PF00317 Ribonucleotide reductase, all-alpha domain IOD66_03010 PF03477 ATP cone domain IOD66_03010 PF02867 Ribonucleotide reductase, barrel domain IOD66_03015 PF00149 Calcineurin-like phosphoesterase IOD66_03025 PF06628 Catalase-related immune-responsive IOD66_03025 PF00199 Catalase IOD66_03030 PF00183 Hsp90 protein IOD66_03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD66_03040 PF00456 Transketolase, thiamine diphosphate binding domain IOD66_03040 PF02780 Transketolase, C-terminal domain IOD66_03040 PF02779 Transketolase, pyrimidine binding domain IOD66_03045 PF01197 Ribosomal protein L31 IOD66_03065 PF03466 LysR substrate binding domain IOD66_03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_03070 PF03372 Endonuclease/Exonuclease/phosphatase family IOD66_03080 PF01171 PP-loop family IOD66_03085 PF04217 Protein of unknown function, DUF412 IOD66_03095 PF04279 Intracellular septation protein A IOD66_03100 PF03061 Thioesterase superfamily IOD66_03105 PF03795 YCII-related domain IOD66_03110 PF08335 GlnD PII-uridylyltransferase IOD66_03110 PF03710 Glutamate-ammonia ligase adenylyltransferase IOD66_03115 PF06062 Uncharacterised protein family (UPF0231) IOD66_03120 PF03616 Sodium/glutamate symporter IOD66_03125 PF06826 Predicted Permease Membrane Region IOD66_03125 PF02080 TrkA-C domain IOD66_03130 PF04220 Der GTPase activator (YihI) IOD66_03140 PF06969 HemN C-terminal domain IOD66_03140 PF04055 Radical SAM superfamily IOD66_03145 PF03968 OstA-like protein IOD66_03145 PF04453 LPS transport system D IOD66_03150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IOD66_03150 PF17287 POTRA domain IOD66_03150 PF08479 POTRA domain, ShlB-type IOD66_03155 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IOD66_03155 PF17287 POTRA domain IOD66_03155 PF08479 POTRA domain, ShlB-type IOD66_03160 PF04829 Pre-toxin domain with VENN motif IOD66_03160 PF05860 haemagglutination activity domain IOD66_03160 PF13332 Hemagglutinin repeat IOD66_03160 PF13018 Extended Signal Peptide of Type V secretion system IOD66_03180 PF02142 MGS-like domain IOD66_03180 PF01808 AICARFT/IMPCHase bienzyme IOD66_03185 PF17176 tRNA-binding domain IOD66_03185 PF13718 GNAT acetyltransferase 2 IOD66_03185 PF05127 Helicase IOD66_03190 PF02794 RTX toxin acyltransferase family IOD66_03195 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IOD66_03195 PF02382 N-terminal domain in RTX protein IOD66_03195 PF08339 RTX C-terminal domain IOD66_03200 PF03412 Peptidase C39 family IOD66_03200 PF00664 ABC transporter transmembrane region IOD66_03200 PF00005 ABC transporter IOD66_03220 PF01381 Helix-turn-helix IOD66_03225 PF06114 IrrE N-terminal-like domain IOD66_03255 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IOD66_03260 PF01272 Transcription elongation factor, GreA/GreB, C-term IOD66_03260 PF03449 Transcription elongation factor, N-terminal IOD66_03265 PF05175 Methyltransferase small domain IOD66_03270 PF00202 Aminotransferase class-III IOD66_03275 PF00155 Aminotransferase class I and II IOD66_03280 PF04301 Protein of unknown function (DUF452) IOD66_03285 PF08241 Methyltransferase domain IOD66_03295 PF01713 Smr domain IOD66_03305 PF00072 Response regulator receiver domain IOD66_03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD66_03305 PF00512 His Kinase A (phospho-acceptor) domain IOD66_03305 PF18415 Histidine kinase receptor ArcB trans-membrane domain IOD66_03305 PF01627 Hpt domain IOD66_03305 PF00989 PAS fold IOD66_03310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IOD66_03310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IOD66_03315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IOD66_03320 PF02082 Transcriptional regulator IOD66_03325 PF00266 Aminotransferase class-V IOD66_03330 PF01592 NifU-like N terminal domain IOD66_03335 PF01521 Iron-sulphur cluster biosynthesis IOD66_03340 PF07743 HSCB C-terminal oligomerisation domain IOD66_03350 PF10946 Protein of unknown function DUF2625 IOD66_03355 PF00012 Hsp70 protein IOD66_03360 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD66_03365 PF04384 Iron-sulphur cluster assembly IOD66_03390 PF07715 TonB-dependent Receptor Plug Domain IOD66_03390 PF00593 TonB dependent receptor IOD66_03400 PF01966 HD domain IOD66_03400 PF01743 Poly A polymerase head domain IOD66_03400 PF12627 Probable RNA and SrmB- binding site of polymerase A IOD66_03405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IOD66_03410 PF09190 DALR domain IOD66_03410 PF01406 tRNA synthetases class I (C) catalytic domain IOD66_03415 PF00005 ABC transporter IOD66_03415 PF09383 NIL domain IOD66_03420 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_03425 PF03180 NLPA lipoprotein IOD66_03430 PF03180 NLPA lipoprotein IOD66_03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_03435 PF03466 LysR substrate binding domain IOD66_03440 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IOD66_03445 PF14602 Hexapeptide repeat of succinyl-transferase IOD66_03445 PF12464 Maltose acetyltransferase IOD66_03460 PF01227 GTP cyclohydrolase I IOD66_03465 PF01416 tRNA pseudouridine synthase IOD66_03470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IOD66_03475 PF03279 Bacterial lipid A biosynthesis acyltransferase IOD66_03480 PF00701 Dihydrodipicolinate synthetase family IOD66_03490 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IOD66_03490 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IOD66_03505 PF04216 Protein involved in formate dehydrogenase formation IOD66_03510 PF01292 Prokaryotic cytochrome b561 IOD66_03515 PF13247 4Fe-4S dicluster domain IOD66_03515 PF09163 Formate dehydrogenase N, transmembrane IOD66_03525 PF02634 FdhD/NarQ family IOD66_03540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IOD66_03540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IOD66_03540 PF00378 Enoyl-CoA hydratase/isomerase IOD66_03550 PF10576 Iron-sulfur binding domain of endonuclease III IOD66_03550 PF00730 HhH-GPD superfamily base excision DNA repair protein IOD66_03550 PF00633 Helix-hairpin-helix motif IOD66_03555 PF01925 Sulfite exporter TauE/SafE IOD66_03560 PF00696 Amino acid kinase family IOD66_03560 PF01472 PUA domain IOD66_03565 PF00186 Dihydrofolate reductase IOD66_03575 PF18073 Rubredoxin metal binding domain IOD66_03580 PF07963 Prokaryotic N-terminal methylation motif IOD66_03585 PF00437 Type II/IV secretion system protein IOD66_03585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IOD66_03590 PF00482 Type II secretion system (T2SS), protein F IOD66_03600 PF01121 Dephospho-CoA kinase IOD66_03605 PF03884 DNA gyrase inhibitor YacG IOD66_03610 PF06144 DNA polymerase III, delta subunit IOD66_03610 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IOD66_03615 PF04390 Lipopolysaccharide-assembly IOD66_03620 PF08264 Anticodon-binding domain of tRNA IOD66_03620 PF00133 tRNA synthetases class I (I, L, M and V) IOD66_03620 PF13603 Leucyl-tRNA synthetase, Domain 2 IOD66_03625 PF03575 Peptidase family S51 IOD66_03630 PF03606 C4-dicarboxylate anaerobic carrier IOD66_03635 PF07687 Peptidase dimerisation domain IOD66_03635 PF01546 Peptidase family M20/M25/M40 IOD66_03640 PF02403 Seryl-tRNA synthetase N-terminal domain IOD66_03640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IOD66_03645 PF01668 SmpB protein IOD66_03650 PF04317 YcjX-like family, DUF463 IOD66_03655 PF01928 CYTH domain IOD66_03665 PF03701 Uncharacterised protein family (UPF0181) IOD66_03670 PF00849 RNA pseudouridylate synthase IOD66_03675 PF04287 tRNA pseudouridine synthase C IOD66_03680 PF02661 Fic/DOC family IOD66_03680 PF12728 Helix-turn-helix domain IOD66_03685 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IOD66_03685 PF00218 Indole-3-glycerol phosphate synthase IOD66_03690 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IOD66_03690 PF01266 FAD dependent oxidoreductase IOD66_03695 PF03315 Serine dehydratase beta chain IOD66_03695 PF03313 Serine dehydratase alpha chain IOD66_03700 PF03222 Tryptophan/tyrosine permease family IOD66_03705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD66_03710 PF02219 Methylenetetrahydrofolate reductase IOD66_03715 PF01717 Cobalamin-independent synthase, Catalytic domain IOD66_03720 PF00890 FAD binding domain IOD66_03725 PF00005 ABC transporter IOD66_03725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IOD66_03730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IOD66_03730 PF00005 ABC transporter IOD66_03735 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_03740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD66_03745 PF06969 HemN C-terminal domain IOD66_03745 PF04055 Radical SAM superfamily IOD66_03750 PF00578 AhpC/TSA family IOD66_03760 PF14489 QueF-like protein IOD66_03760 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IOD66_03765 PF00588 SpoU rRNA Methylase family IOD66_03770 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IOD66_03770 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IOD66_03770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IOD66_03775 PF02233 NAD(P) transhydrogenase beta subunit IOD66_03780 PF02321 Outer membrane efflux protein IOD66_03790 PF00005 ABC transporter IOD66_03795 PF13533 Biotin-lipoyl like IOD66_03800 PF14278 Transcriptional regulator C-terminal region IOD66_03800 PF00440 Bacterial regulatory proteins, tetR family IOD66_03805 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) IOD66_03810 PF00485 Phosphoribulokinase / Uridine kinase family IOD66_03815 PF01810 LysE type translocator IOD66_03820 PF00300 Histidine phosphatase superfamily (branch 1) IOD66_03825 PF01551 Peptidase family M23 IOD66_03830 PF04748 Divergent polysaccharide deacetylase IOD66_03835 PF01103 Surface antigen IOD66_03835 PF17243 POTRA domain TamA domain 1 IOD66_03840 PF04357 TamB, inner membrane protein subunit of TAM complex IOD66_03845 PF00664 ABC transporter transmembrane region IOD66_03845 PF00005 ABC transporter IOD66_03850 PF00664 ABC transporter transmembrane region IOD66_03850 PF00005 ABC transporter IOD66_03855 PF04356 Protein of unknown function (DUF489) IOD66_03860 PF08328 Adenylosuccinate lyase C-terminal IOD66_03860 PF00206 Lyase IOD66_03865 PF00455 DeoR C terminal sensor domain IOD66_03865 PF08220 DeoR-like helix-turn-helix domain IOD66_03870 PF01040 UbiA prenyltransferase family IOD66_03875 PF00204 DNA gyrase B IOD66_03875 PF00986 DNA gyrase B subunit, carboxyl terminus IOD66_03875 PF18053 DNA gyrase B subunit insert domain IOD66_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD66_03875 PF01751 Toprim domain IOD66_03880 PF09335 SNARE associated Golgi protein IOD66_03885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IOD66_03885 PF00356 Bacterial regulatory proteins, lacI family IOD66_03890 PF00576 HIUase/Transthyretin family IOD66_03900 PF13742 OB-fold nucleic acid binding domain IOD66_03900 PF02601 Exonuclease VII, large subunit IOD66_03910 PF06725 3D domain IOD66_03910 PF03562 MltA specific insert domain IOD66_03920 PF08003 Protein of unknown function (DUF1698) IOD66_03925 PF01555 DNA methylase IOD66_03925 PF18273 Type III R-M EcoP15I C-terminal domain IOD66_03930 PF04851 Type III restriction enzyme, res subunit IOD66_03930 PF08774 VRR-NUC domain IOD66_03935 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IOD66_03935 PF18381 YcaO cyclodehydratase C-terminal domain IOD66_03940 PF00575 S1 RNA binding domain IOD66_03940 PF10150 Ribonuclease E/G family IOD66_03945 PF00152 tRNA synthetases class II (D, K and N) IOD66_03945 PF01336 OB-fold nucleic acid binding domain IOD66_03955 PF00348 Polyprenyl synthetase IOD66_03960 PF02609 Exonuclease VII small subunit IOD66_03965 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD66_03965 PF03473 MOSC domain IOD66_03965 PF03476 MOSC N-terminal beta barrel domain IOD66_03970 PF00884 Sulfatase IOD66_03980 PF02542 YgbB family IOD66_03985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IOD66_03990 PF04977 Septum formation initiator IOD66_03995 PF01293 Phosphoenolpyruvate carboxykinase IOD66_04005 PF13580 SIS domain IOD66_04010 PF18024 Helix-turn-helix domain IOD66_04010 PF00158 Sigma-54 interaction domain IOD66_04015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD66_04020 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_04025 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_04025 PF12911 N-terminal TM domain of oligopeptide transport permease C IOD66_04030 PF00005 ABC transporter IOD66_04030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IOD66_04035 PF04237 YjbR IOD66_04050 PF03060 Nitronate monooxygenase IOD66_04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_04055 PF03466 LysR substrate binding domain IOD66_04085 PF00436 Single-strand binding protein family IOD66_04090 PF17755 UvrA DNA-binding domain IOD66_04090 PF17760 UvrA interaction domain IOD66_04100 PF06733 DEAD_2 IOD66_04100 PF13307 Helicase C-terminal domain IOD66_04110 PF04172 LrgB-like family IOD66_04115 PF00005 ABC transporter IOD66_04115 PF00664 ABC transporter transmembrane region IOD66_04120 PF03550 Outer membrane lipoprotein LolB IOD66_04125 PF08544 GHMP kinases C terminal IOD66_04125 PF00288 GHMP kinases N terminal domain IOD66_04130 PF14572 Phosphoribosyl synthetase-associated domain IOD66_04130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IOD66_04135 PF01180 Dihydroorotate dehydrogenase IOD66_04140 PF17831 Pyruvate dehydrogenase E1 component middle domain IOD66_04140 PF00456 Transketolase, thiamine diphosphate binding domain IOD66_04145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IOD66_04145 PF00364 Biotin-requiring enzyme IOD66_04145 PF02817 e3 binding domain IOD66_04150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IOD66_04150 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD66_04180 PF00149 Calcineurin-like phosphoesterase IOD66_04180 PF02872 5'-nucleotidase, C-terminal domain IOD66_04185 PF01219 Prokaryotic diacylglycerol kinase IOD66_04190 PF00375 Sodium:dicarboxylate symporter family IOD66_04195 PF00753 Metallo-beta-lactamase superfamily IOD66_04195 PF13567 Domain of unknown function (DUF4131) IOD66_04195 PF03772 Competence protein IOD66_04200 PF02547 Queuosine biosynthesis protein IOD66_04205 PF01933 Uncharacterised protein family UPF0052 IOD66_04210 PF01594 AI-2E family transporter IOD66_04215 PF13649 Methyltransferase domain IOD66_04220 PF03889 Alternative ribosome-rescue factor A IOD66_04230 PF00149 Calcineurin-like phosphoesterase IOD66_04235 PF04172 LrgB-like family IOD66_04240 PF03788 LrgA family IOD66_04245 PF00773 RNB domain IOD66_04245 PF08206 Ribonuclease B OB domain IOD66_04245 PF00575 S1 RNA binding domain IOD66_04265 PF13649 Methyltransferase domain IOD66_04270 PF00561 alpha/beta hydrolase fold IOD66_04275 PF03925 SeqA protein C-terminal domain IOD66_04275 PF17206 SeqA protein N-terminal domain IOD66_04280 PF00501 AMP-binding enzyme IOD66_04285 PF12794 Mechanosensitive ion channel inner membrane domain 1 IOD66_04285 PF12795 Mechanosensitive ion channel porin domain IOD66_04285 PF00924 Mechanosensitive ion channel IOD66_04290 PF12795 Mechanosensitive ion channel porin domain IOD66_04290 PF12794 Mechanosensitive ion channel inner membrane domain 1 IOD66_04290 PF00924 Mechanosensitive ion channel IOD66_04295 PF01264 Chorismate synthase IOD66_04300 PF03411 Penicillin-insensitive murein endopeptidase IOD66_04310 PF01751 Toprim domain IOD66_04310 PF01131 DNA topoisomerase IOD66_04315 PF03840 Preprotein translocase SecG subunit IOD66_04325 PF13180 PDZ domain IOD66_04330 PF02224 Cytidylate kinase IOD66_04335 PF00575 S1 RNA binding domain IOD66_04340 PF00216 Bacterial DNA-binding protein IOD66_04345 PF06305 Lipopolysaccharide assembly protein A domain IOD66_04350 PF18073 Rubredoxin metal binding domain IOD66_04355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IOD66_04360 PF01253 Translation initiation factor SUI1 IOD66_04370 PF04474 Protein of unknown function (DUF554) IOD66_04375 PF02441 Flavoprotein IOD66_04380 PF04247 Invasion gene expression up-regulator, SirB IOD66_04385 PF04751 Protein of unknown function (DUF615) IOD66_04390 PF01523 Putative modulator of DNA gyrase IOD66_04395 PF10369 Small subunit of acetolactate synthase IOD66_04400 PF00205 Thiamine pyrophosphate enzyme, central domain IOD66_04400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IOD66_04400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IOD66_04405 PF00484 Carbonic anhydrase IOD66_04410 PF00313 'Cold-shock' DNA-binding domain IOD66_04420 PF01702 Queuine tRNA-ribosyltransferase IOD66_04425 PF01814 Hemerythrin HHE cation binding domain IOD66_04435 PF08239 Bacterial SH3 domain IOD66_04440 PF01384 Phosphate transporter family IOD66_04445 PF01865 Protein of unknown function DUF47 IOD66_04450 PF00005 ABC transporter IOD66_04455 PF01032 FecCD transport family IOD66_04460 PF01032 FecCD transport family IOD66_04465 PF01497 Periplasmic binding protein IOD66_04470 PF00772 DnaB-like helicase N terminal domain IOD66_04470 PF03796 DnaB-like helicase C terminal domain IOD66_04475 PF05166 YcgL domain IOD66_04480 PF03477 ATP cone domain IOD66_04485 PF01842 ACT domain IOD66_04485 PF00696 Amino acid kinase family IOD66_04490 PF04363 Protein of unknown function (DUF496) IOD66_04495 PF02541 Ppx/GppA phosphatase family IOD66_04500 PF04074 YhcH/YjgK/YiaL IOD66_04505 PF01418 Helix-turn-helix domain, rpiR family IOD66_04505 PF01380 SIS domain IOD66_04510 PF01555 DNA methylase IOD66_04520 PF00271 Helicase conserved C-terminal domain IOD66_04520 PF00176 SNF2 family N-terminal domain IOD66_04525 PF00266 Aminotransferase class-V IOD66_04530 PF01053 Cys/Met metabolism PLP-dependent enzyme IOD66_04535 PF00155 Aminotransferase class I and II IOD66_04540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IOD66_04545 PF00696 Amino acid kinase family IOD66_04545 PF00583 Acetyltransferase (GNAT) family IOD66_04555 PF08272 Topoisomerase I zinc-ribbon-like IOD66_04555 PF01131 DNA topoisomerase IOD66_04555 PF01751 Toprim domain IOD66_04555 PF01396 Topoisomerase DNA binding C4 zinc finger IOD66_04560 PF17176 tRNA-binding domain IOD66_04560 PF05127 Helicase IOD66_04560 PF13718 GNAT acetyltransferase 2 IOD66_04565 PF02130 Uncharacterized protein family UPF0054 IOD66_04570 PF02391 MoaE protein IOD66_04575 PF02597 ThiS family IOD66_04580 PF01967 MoaC family IOD66_04585 PF04055 Radical SAM superfamily IOD66_04585 PF06463 Molybdenum Cofactor Synthesis C IOD66_04590 PF03264 NapC/NirT cytochrome c family, N-terminal region IOD66_04595 PF18364 Molybdopterin oxidoreductase N-terminal domain IOD66_04595 PF01568 Molydopterin dinucleotide binding domain IOD66_04595 PF00384 Molybdopterin oxidoreductase IOD66_04600 PF01565 FAD binding domain IOD66_04600 PF09330 D-lactate dehydrogenase, membrane binding IOD66_04605 PF04241 Protein of unknown function (DUF423) IOD66_04610 PF01728 FtsJ-like methyltransferase IOD66_04610 PF18125 RlmM ferredoxin-like domain IOD66_04615 PF05173 Dihydrodipicolinate reductase, C-terminus IOD66_04615 PF01113 Dihydrodipicolinate reductase, N-terminus IOD66_04620 PF01053 Cys/Met metabolism PLP-dependent enzyme IOD66_04625 PF00156 Phosphoribosyl transferase domain IOD66_04630 PF14718 Soluble lytic murein transglycosylase L domain IOD66_04630 PF01464 Transglycosylase SLT domain IOD66_04635 PF07690 Major Facilitator Superfamily IOD66_04645 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IOD66_04645 PF00749 tRNA synthetases class I (E and Q), catalytic domain IOD66_04650 PF01132 Elongation factor P (EF-P) OB domain IOD66_04650 PF08207 Elongation factor P (EF-P) KOW-like domain IOD66_04650 PF09285 Elongation factor P, C-terminal IOD66_04660 PF04055 Radical SAM superfamily IOD66_04665 PF00152 tRNA synthetases class II (D, K and N) IOD66_04665 PF01336 OB-fold nucleic acid binding domain IOD66_04670 PF00654 Voltage gated chloride channel IOD66_04675 PF08411 Exonuclease C-terminal IOD66_04675 PF00929 Exonuclease IOD66_04685 PF02811 PHP domain IOD66_04695 PF10518 TAT (twin-arginine translocation) pathway signal sequence IOD66_04695 PF04261 Dyp-type peroxidase family IOD66_04700 PF09375 Imelysin IOD66_04705 PF00271 Helicase conserved C-terminal domain IOD66_04705 PF04851 Type III restriction enzyme, res subunit IOD66_04705 PF02151 UvrB/uvrC motif IOD66_04705 PF12344 Ultra-violet resistance protein B IOD66_04705 PF17757 UvrB interaction domain IOD66_04715 PF01850 PIN domain IOD66_04720 PF13635 Domain of unknown function (DUF4143) IOD66_04720 PF13173 AAA domain IOD66_04725 PF05195 Aminopeptidase P, N-terminal domain IOD66_04725 PF00557 Metallopeptidase family M24 IOD66_04730 PF00155 Aminotransferase class I and II IOD66_04735 PF02222 ATP-grasp domain IOD66_04735 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IOD66_04740 PF00710 Asparaginase, N-terminal IOD66_04740 PF17763 Glutaminase/Asparaginase C-terminal domain IOD66_04745 PF00731 AIR carboxylase IOD66_04750 PF00043 Glutathione S-transferase, C-terminal domain IOD66_04750 PF02798 Glutathione S-transferase, N-terminal domain IOD66_04755 PF04386 Stringent starvation protein B IOD66_04760 PF00027 Cyclic nucleotide-binding domain IOD66_04760 PF00325 Bacterial regulatory proteins, crp family IOD66_04765 PF00582 Universal stress protein family IOD66_04770 PF01411 tRNA synthetases class II (A) IOD66_04770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IOD66_04770 PF02272 DHHA1 domain IOD66_04775 PF02599 Global regulator protein family IOD66_04780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IOD66_04780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IOD66_04780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IOD66_04780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IOD66_04785 PF00483 Nucleotidyl transferase IOD66_04795 PF13609 Gram-negative porin IOD66_04805 PF02872 5'-nucleotidase, C-terminal domain IOD66_04805 PF00149 Calcineurin-like phosphoesterase IOD66_04810 PF00871 Acetokinase family IOD66_04815 PF01515 Phosphate acetyl/butaryl transferase IOD66_04815 PF07085 DRTGG domain IOD66_04820 PF07411 Domain of unknown function (DUF1508) IOD66_04825 PF13406 Transglycosylase SLT domain IOD66_04830 PF16198 tRNA pseudouridylate synthase B C-terminal domain IOD66_04830 PF01509 TruB family pseudouridylate synthase (N terminal domain) IOD66_04830 PF09157 Pseudouridine synthase II TruB, C-terminal IOD66_04835 PF02033 Ribosome-binding factor A IOD66_04840 PF11987 Translation-initiation factor 2 IOD66_04840 PF00009 Elongation factor Tu GTP binding domain IOD66_04840 PF04760 Translation initiation factor IF-2, N-terminal region IOD66_04845 PF13184 NusA-like KH domain IOD66_04845 PF08529 NusA N-terminal domain IOD66_04845 PF00575 S1 RNA binding domain IOD66_04850 PF02576 RimP N-terminal domain IOD66_04850 PF17384 RimP C-terminal SH3 domain IOD66_04860 PF11867 Domain of unknown function (DUF3387) IOD66_04860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IOD66_04860 PF18766 SWI2/SNF2 ATPase IOD66_04870 PF01420 Type I restriction modification DNA specificity domain IOD66_04875 PF02384 N-6 DNA Methylase IOD66_04880 PF08245 Mur ligase middle domain IOD66_04885 PF17848 Acetyl-coA carboxylase zinc finger domain IOD66_04885 PF01039 Carboxyl transferase domain IOD66_04890 PF03819 MazG nucleotide pyrophosphohydrolase domain IOD66_04895 PF00486 Transcriptional regulatory protein, C terminal IOD66_04895 PF00072 Response regulator receiver domain IOD66_04905 PF00005 ABC transporter IOD66_04905 PF12704 MacB-like periplasmic core domain IOD66_04905 PF02687 FtsX-like permease family IOD66_04910 PF01784 NIF3 (NGG1p interacting factor 3) IOD66_04915 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IOD66_04920 PF06005 Cell division protein ZapB IOD66_04925 PF00265 Thymidine kinase IOD66_04930 PF00814 Glycoprotease family IOD66_04935 PF00793 DAHP synthetase I family IOD66_04940 PF04228 Putative neutral zinc metallopeptidase IOD66_04945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IOD66_04945 PF17854 FtsK alpha domain IOD66_04945 PF09397 Ftsk gamma domain IOD66_04945 PF01580 FtsK/SpoIIIE family IOD66_04950 PF01037 Lrp/AsnC ligand binding domain IOD66_04955 PF00570 HRDC domain IOD66_04955 PF01612 3'-5' exonuclease IOD66_04960 PF00480 ROK family IOD66_04960 PF01047 MarR family IOD66_04975 PF00877 NlpC/P60 family IOD66_04980 PF00216 Bacterial DNA-binding protein IOD66_04985 PF03483 B3/4 domain IOD66_04985 PF03484 tRNA synthetase B5 domain IOD66_04985 PF03147 Ferredoxin-fold anticodon binding domain IOD66_04985 PF01588 Putative tRNA binding domain IOD66_04985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IOD66_04990 PF01409 tRNA synthetases class II core domain (F) IOD66_04990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IOD66_04995 PF00881 Nitroreductase family IOD66_05000 PF00375 Sodium:dicarboxylate symporter family IOD66_05010 PF01545 Cation efflux family IOD66_05010 PF16916 Dimerisation domain of Zinc Transporter IOD66_05020 PF03883 Peroxide stress protein YaaA IOD66_05025 PF00380 Ribosomal protein S9/S16 IOD66_05030 PF00572 Ribosomal protein L13 IOD66_05035 PF06295 Protein of unknown function (DUF1043) IOD66_05040 PF01966 HD domain IOD66_05040 PF08335 GlnD PII-uridylyltransferase IOD66_05045 PF03222 Tryptophan/tyrosine permease family IOD66_05055 PF01434 Peptidase family M41 IOD66_05055 PF00004 ATPase family associated with various cellular activities (AAA) IOD66_05055 PF17862 AAA+ lid domain IOD66_05055 PF06480 FtsH Extracellular IOD66_05060 PF01728 FtsJ-like methyltransferase IOD66_05065 PF00571 CBS domain IOD66_05065 PF00478 IMP dehydrogenase / GMP reductase domain IOD66_05075 PF00117 Glutamine amidotransferase class-I IOD66_05075 PF00958 GMP synthase C terminal domain IOD66_05075 PF02540 NAD synthase IOD66_05080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IOD66_05080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IOD66_05080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IOD66_05080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IOD66_05085 PF08942 Domain of unknown function (DUF1919) IOD66_05095 PF00132 Bacterial transferase hexapeptide (six repeats) IOD66_05095 PF12804 MobA-like NTP transferase domain IOD66_05100 PF00873 AcrB/AcrD/AcrF family IOD66_05105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD66_05110 PF00440 Bacterial regulatory proteins, tetR family IOD66_05115 PF07208 Protein of unknown function (DUF1414) IOD66_05120 PF00884 Sulfatase IOD66_05120 PF11893 Domain of unknown function (DUF3413) IOD66_05125 PF07690 Major Facilitator Superfamily IOD66_05130 PF04310 MukB N-terminal IOD66_05130 PF16330 MukB hinge domain IOD66_05135 PF04288 MukE-like family IOD66_05140 PF03882 MukF winged-helix domain IOD66_05140 PF17193 MukF C-terminal domain IOD66_05140 PF17192 MukF middle domain IOD66_05145 PF00521 DNA gyrase/topoisomerase IV, subunit A IOD66_05145 PF03989 DNA gyrase C-terminal domain, beta-propeller IOD66_05150 PF00575 S1 RNA binding domain IOD66_05150 PF03725 3' exoribonuclease family, domain 2 IOD66_05150 PF01138 3' exoribonuclease family, domain 1 IOD66_05150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IOD66_05150 PF00013 KH domain IOD66_05160 PF03880 DbpA RNA binding domain IOD66_05160 PF00271 Helicase conserved C-terminal domain IOD66_05160 PF00270 DEAD/DEAH box helicase IOD66_05165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IOD66_05170 PF01174 SNO glutamine amidotransferase family IOD66_05175 PF01680 SOR/SNZ family IOD66_05180 PF00155 Aminotransferase class I and II IOD66_05180 PF00392 Bacterial regulatory proteins, gntR family IOD66_05185 PF01765 Ribosome recycling factor IOD66_05190 PF00696 Amino acid kinase family IOD66_05195 PF00884 Sulfatase IOD66_05200 PF00889 Elongation factor TS IOD66_05205 PF00318 Ribosomal protein S2 IOD66_05220 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_05230 PF05872 Bacterial protein of unknown function (DUF853) IOD66_05265 PF02565 Recombination protein O C terminal IOD66_05265 PF11967 Recombination protein O N terminal IOD66_05270 PF01926 50S ribosome-binding GTPase IOD66_05270 PF07650 KH domain IOD66_05275 PF14622 Ribonuclease-III-like IOD66_05275 PF00035 Double-stranded RNA binding motif IOD66_05280 PF10502 Signal peptidase, peptidase S26 IOD66_05285 PF00679 Elongation factor G C-terminus IOD66_05285 PF00009 Elongation factor Tu GTP binding domain IOD66_05285 PF03144 Elongation factor Tu domain 2 IOD66_05285 PF06421 GTP-binding protein LepA C-terminus IOD66_05290 PF02581 Thiamine monophosphate synthase IOD66_05300 PF09084 NMT1/THI5 like IOD66_05305 PF03070 TENA/THI-4/PQQC family IOD66_05310 PF04055 Radical SAM superfamily IOD66_05310 PF06968 Biotin and Thiamin Synthesis associated domain IOD66_05320 PF02597 ThiS family IOD66_05330 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_05340 PF01235 Sodium:alanine symporter family IOD66_05345 PF03824 High-affinity nickel-transport protein IOD66_05350 PF06226 Protein of unknown function (DUF1007) IOD66_05360 PF01386 Ribosomal L25p family IOD66_05365 PF00390 Malic enzyme, N-terminal domain IOD66_05365 PF03949 Malic enzyme, NAD binding domain IOD66_05365 PF01515 Phosphate acetyl/butaryl transferase IOD66_05370 PF02698 DUF218 domain IOD66_05375 PF08443 RimK-like ATP-grasp domain IOD66_05375 PF18030 RimK PreATP-grasp domain IOD66_05380 PF00881 Nitroreductase family IOD66_05410 PF02627 Carboxymuconolactone decarboxylase family IOD66_05415 PF00912 Transglycosylase IOD66_05420 PF01371 Trp repressor protein IOD66_05425 PF03548 Outer membrane lipoprotein carrier protein LolA IOD66_05440 PF01367 5'-3' exonuclease, C-terminal SAM fold IOD66_05440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IOD66_05440 PF00476 DNA polymerase family A IOD66_05440 PF01612 3'-5' exonuclease IOD66_05450 PF12441 CopG antitoxin of type II toxin-antitoxin system IOD66_05455 PF00290 Tryptophan synthase alpha chain IOD66_05460 PF00291 Pyridoxal-phosphate dependent enzyme IOD66_05465 PF00106 short chain dehydrogenase IOD66_05470 PF03692 Putative zinc- or iron-chelating domain IOD66_05475 PF01268 Formate--tetrahydrofolate ligase IOD66_05480 PF01906 Putative heavy-metal-binding IOD66_05485 PF01725 Ham1 family IOD66_05495 PF00672 HAMP domain IOD66_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD66_05495 PF07730 Histidine kinase IOD66_05495 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IOD66_05505 PF00691 OmpA family IOD66_05505 PF01389 OmpA-like transmembrane domain IOD66_05510 PF17768 RecJ OB domain IOD66_05510 PF01368 DHH family IOD66_05510 PF02272 DHHA1 domain IOD66_05515 PF10411 Disulfide bond isomerase protein N-terminus IOD66_05515 PF13098 Thioredoxin-like domain IOD66_05520 PF04225 Opacity-associated protein A LysM-like domain IOD66_05520 PF01551 Peptidase family M23 IOD66_05525 PF00005 ABC transporter IOD66_05530 PF00676 Dehydrogenase E1 component IOD66_05530 PF16078 2-oxoglutarate dehydrogenase N-terminus IOD66_05530 PF16870 2-oxoglutarate dehydrogenase C-terminal IOD66_05530 PF02779 Transketolase, pyrimidine binding domain IOD66_05535 PF02817 e3 binding domain IOD66_05535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IOD66_05535 PF00364 Biotin-requiring enzyme IOD66_05540 PF04393 Protein of unknown function (DUF535) IOD66_05545 PF00549 CoA-ligase IOD66_05545 PF08442 ATP-grasp domain IOD66_05550 PF02629 CoA binding domain IOD66_05550 PF00549 CoA-ligase IOD66_05555 PF13407 Periplasmic binding protein domain IOD66_05560 PF03553 Na+/H+ antiporter family IOD66_05565 PF00816 H-NS histone family IOD66_05570 PF02652 L-lactate permease IOD66_05575 PF02754 Cysteine-rich domain IOD66_05580 PF11870 Domain of unknown function (DUF3390) IOD66_05580 PF13183 4Fe-4S dicluster domain IOD66_05580 PF02589 LUD domain IOD66_05585 PF02589 LUD domain IOD66_05590 PF13018 Extended Signal Peptide of Type V secretion system IOD66_05590 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin IOD66_05590 PF03895 YadA-like membrane anchor domain IOD66_05590 PF05662 Coiled stalk of trimeric autotransporter adhesin IOD66_05595 PF13018 Extended Signal Peptide of Type V secretion system IOD66_05595 PF03895 YadA-like membrane anchor domain IOD66_05595 PF05658 Head domain of trimeric autotransporter adhesin IOD66_05595 PF05662 Coiled stalk of trimeric autotransporter adhesin IOD66_05605 PF02698 DUF218 domain IOD66_05610 PF00561 alpha/beta hydrolase fold IOD66_05615 PF13230 Glutamine amidotransferases class-II IOD66_05620 PF00950 ABC 3 transport family IOD66_05625 PF00004 ATPase family associated with various cellular activities (AAA) IOD66_05625 PF12002 MgsA AAA+ ATPase C terminal IOD66_05625 PF16193 AAA C-terminal domain IOD66_05630 PF04093 rod shape-determining protein MreD IOD66_05635 PF04085 rod shape-determining protein MreC IOD66_05645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IOD66_05645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IOD66_05650 PF01641 SelR domain IOD66_05655 PF00180 Isocitrate/isopropylmalate dehydrogenase IOD66_05660 PF07119 Protein of unknown function (DUF1375) IOD66_05670 PF02578 Multi-copper polyphenol oxidoreductase laccase IOD66_05675 PF01042 Endoribonuclease L-PSP IOD66_05680 PF04245 37-kD nucleoid-associated bacterial protein IOD66_05685 PF04355 SmpA / OmlA family IOD66_05690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IOD66_05690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IOD66_05700 PF00156 Phosphoribosyl transferase domain IOD66_05705 PF02674 Colicin V production protein IOD66_05710 PF00075 RNase H IOD66_05715 PF00764 Arginosuccinate synthase IOD66_05720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IOD66_05725 PF00768 D-alanyl-D-alanine carboxypeptidase IOD66_05730 PF00535 Glycosyl transferase family 2 IOD66_05735 PF01985 CRS1 / YhbY (CRM) domain IOD66_05740 PF01569 PAP2 superfamily IOD66_05745 PF00480 ROK family IOD66_05750 PF16123 Hydroxyacylglutathione hydrolase C-terminus IOD66_05750 PF00753 Metallo-beta-lactamase superfamily IOD66_05755 PF01255 Putative undecaprenyl diphosphate synthase IOD66_05765 PF02163 Peptidase family M50 IOD66_05770 PF07244 Surface antigen variable number repeat IOD66_05770 PF01103 Surface antigen IOD66_05780 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IOD66_05780 PF00132 Bacterial transferase hexapeptide (six repeats) IOD66_05785 PF07977 FabA-like domain IOD66_05790 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IOD66_05790 PF00132 Bacterial transferase hexapeptide (six repeats) IOD66_05795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IOD66_05795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IOD66_05795 PF13288 DXP reductoisomerase C-terminal domain IOD66_05800 PF13291 ACT domain IOD66_05800 PF04607 Region found in RelA / SpoT proteins IOD66_05800 PF02824 TGS domain IOD66_05805 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IOD66_05805 PF01488 Shikimate / quinate 5-dehydrogenase IOD66_05805 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IOD66_05810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IOD66_05810 PF01926 50S ribosome-binding GTPase IOD66_05815 PF01467 Cytidylyltransferase-like IOD66_05815 PF00294 pfkB family carbohydrate kinase IOD66_05820 PF00156 Phosphoribosyl transferase domain IOD66_05825 PF00639 PPIC-type PPIASE domain IOD66_05825 PF09312 SurA N-terminal domain IOD66_05830 PF00398 Ribosomal RNA adenine dimethylase IOD66_05840 PF13193 AMP-binding enzyme C-terminal domain IOD66_05840 PF00501 AMP-binding enzyme IOD66_05850 PF03873 Anti sigma-E protein RseA, C-terminal domain IOD66_05850 PF03872 Anti sigma-E protein RseA, N-terminal domain IOD66_05855 PF08281 Sigma-70, region 4 IOD66_05855 PF04542 Sigma-70 region 2 IOD66_05860 PF00682 HMGL-like IOD66_05860 PF08502 LeuA allosteric (dimerisation) domain IOD66_05870 PF13533 Biotin-lipoyl like IOD66_05875 PF01758 Sodium Bile acid symporter family IOD66_05880 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) IOD66_05885 PF12404 Peptidase IOD66_05885 PF00883 Cytosol aminopeptidase family, catalytic domain IOD66_05890 PF00571 CBS domain IOD66_05890 PF01380 SIS domain IOD66_05895 PF01272 Transcription elongation factor, GreA/GreB, C-term IOD66_05895 PF03449 Transcription elongation factor, N-terminal IOD66_05900 PF00885 6,7-dimethyl-8-ribityllumazine synthase IOD66_05905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IOD66_05905 PF00925 GTP cyclohydrolase II IOD66_05910 PF00677 Lumazine binding domain IOD66_05915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IOD66_05915 PF01872 RibD C-terminal domain IOD66_05920 PF02754 Cysteine-rich domain IOD66_05920 PF13183 4Fe-4S dicluster domain IOD66_05925 PF00890 FAD binding domain IOD66_05930 PF01266 FAD dependent oxidoreductase IOD66_05930 PF04324 BFD-like [2Fe-2S] binding domain IOD66_05935 PF03009 Glycerophosphoryl diester phosphodiesterase family IOD66_05940 PF07690 Major Facilitator Superfamily IOD66_05945 PF02190 ATP-dependent protease La (LON) substrate-binding domain IOD66_05945 PF05362 Lon protease (S16) C-terminal proteolytic domain IOD66_05945 PF00004 ATPase family associated with various cellular activities (AAA) IOD66_05950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IOD66_05950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IOD66_05955 PF00230 Major intrinsic protein IOD66_05960 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IOD66_05965 PF00571 CBS domain IOD66_05965 PF03471 Transporter associated domain IOD66_05970 PF00795 Carbon-nitrogen hydrolase IOD66_05975 PF12705 PD-(D/E)XK nuclease superfamily IOD66_05975 PF00580 UvrD/REP helicase N-terminal domain IOD66_05975 PF13361 UvrD-like helicase C-terminal domain IOD66_05980 PF01554 MatE IOD66_05985 PF13416 Bacterial extracellular solute-binding protein IOD66_05990 PF01025 GrpE IOD66_05995 PF04284 Protein of unknown function (DUF441) IOD66_06000 PF00270 DEAD/DEAH box helicase IOD66_06000 PF11898 Domain of unknown function (DUF3418) IOD66_06000 PF04408 Helicase associated domain (HA2) IOD66_06000 PF00271 Helicase conserved C-terminal domain IOD66_06000 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IOD66_06005 PF03797 Autotransporter beta-domain IOD66_06005 PF00082 Subtilase family IOD66_06010 PF04393 Protein of unknown function (DUF535) IOD66_06015 PF03167 Uracil DNA glycosylase superfamily IOD66_06020 PF01228 Glycine radical IOD66_06025 PF00717 Peptidase S24-like IOD66_06030 PF00877 NlpC/P60 family IOD66_06035 PF01261 Xylose isomerase-like TIM barrel IOD66_06050 PF07690 Major Facilitator Superfamily IOD66_06055 PF00849 RNA pseudouridylate synthase IOD66_06055 PF01479 S4 domain IOD66_06065 PF13378 Enolase C-terminal domain-like IOD66_06070 PF08264 Anticodon-binding domain of tRNA IOD66_06070 PF09334 tRNA synthetases class I (M) IOD66_06070 PF01588 Putative tRNA binding domain IOD66_06075 PF00334 Nucleoside diphosphate kinase IOD66_06080 PF00343 Carbohydrate phosphorylase IOD66_06085 PF08323 Starch synthase catalytic domain IOD66_06085 PF00534 Glycosyl transferases group 1 IOD66_06090 PF00483 Nucleotidyl transferase IOD66_06095 PF00128 Alpha amylase, catalytic domain IOD66_06095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IOD66_06095 PF18390 Glycogen debranching enzyme C-terminal domain IOD66_06100 PF00128 Alpha amylase, catalytic domain IOD66_06100 PF02806 Alpha amylase, C-terminal all-beta domain IOD66_06100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IOD66_06105 PF00381 PTS HPr component phosphorylation site IOD66_06105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IOD66_06110 PF00294 pfkB family carbohydrate kinase IOD66_06115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IOD66_06120 PF04011 LemA family IOD66_06130 PF04536 TPM domain IOD66_06135 PF00311 Phosphoenolpyruvate carboxylase IOD66_06145 PF03968 OstA-like protein IOD66_06150 PF12399 Branched-chain amino acid ATP-binding cassette transporter IOD66_06150 PF00005 ABC transporter IOD66_06155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IOD66_06160 PF03668 P-loop ATPase protein family IOD66_06165 PF01494 FAD binding domain IOD66_06185 PF01494 FAD binding domain IOD66_06190 PF00293 NUDIX domain IOD66_06210 PF02562 PhoH-like protein IOD66_06215 PF07840 FadR C-terminal domain IOD66_06215 PF00392 Bacterial regulatory proteins, gntR family IOD66_06220 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IOD66_06225 PF02600 Disulfide bond formation protein DsbB IOD66_06230 PF01053 Cys/Met metabolism PLP-dependent enzyme IOD66_06235 PF01717 Cobalamin-independent synthase, Catalytic domain IOD66_06240 PF00156 Phosphoribosyl transferase domain IOD66_06245 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IOD66_06250 PF01510 N-acetylmuramoyl-L-alanine amidase IOD66_06255 PF00849 RNA pseudouridylate synthase IOD66_06260 PF00271 Helicase conserved C-terminal domain IOD66_06260 PF12137 RNA polymerase recycling family C-terminal IOD66_06260 PF00176 SNF2 family N-terminal domain IOD66_06260 PF18339 RapA N-terminal Tudor like domain 1 IOD66_06260 PF18337 RapA N-terminal Tudor like domain IOD66_06265 PF01966 HD domain IOD66_06265 PF13286 Phosphohydrolase-associated domain IOD66_06270 PF01938 TRAM domain IOD66_06270 PF05958 tRNA (Uracil-5-)-methyltransferase IOD66_06280 PF00899 ThiF family IOD66_06285 PF00994 Probable molybdopterin binding domain IOD66_06285 PF03453 MoeA N-terminal region (domain I and II) IOD66_06285 PF03454 MoeA C-terminal region (domain IV) IOD66_06295 PF00005 ABC transporter IOD66_06295 PF12848 ABC transporter IOD66_06300 PF05128 Domain of unknown function (DUF697) IOD66_06305 PF01207 Dihydrouridine synthase (Dus) IOD66_06310 PF00226 DnaJ domain IOD66_06310 PF05099 Tellurite resistance protein TerB IOD66_06320 PF00691 OmpA family IOD66_06325 PF07676 WD40-like Beta Propeller Repeat IOD66_06325 PF04052 TolB amino-terminal domain IOD66_06330 PF06519 TolA C-terminal IOD66_06330 PF06519 TolA C-terminal IOD66_06335 PF02472 Biopolymer transport protein ExbD/TolR IOD66_06340 PF01618 MotA/TolQ/ExbB proton channel family IOD66_06345 PF03061 Thioesterase superfamily IOD66_06360 PF02322 Cytochrome bd terminal oxidase subunit II IOD66_06365 PF01654 Cytochrome bd terminal oxidase subunit I IOD66_06370 PF17274 Family of unknown function (DUF5339) IOD66_06375 PF00899 ThiF family IOD66_06380 PF00005 ABC transporter IOD66_06380 PF16326 ABC transporter C-terminal domain IOD66_06380 PF12848 ABC transporter IOD66_06385 PF12008 Type I restriction and modification enzyme - subunit R C terminal IOD66_06385 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IOD66_06385 PF18766 SWI2/SNF2 ATPase IOD66_06395 PF01420 Type I restriction modification DNA specificity domain IOD66_06410 PF00521 DNA gyrase/topoisomerase IV, subunit A IOD66_06410 PF03989 DNA gyrase C-terminal domain, beta-propeller IOD66_06420 PF17864 RuvB AAA lid domain IOD66_06420 PF05491 RuvB C-terminal winged helix domain IOD66_06420 PF05496 Holliday junction DNA helicase RuvB P-loop domain IOD66_06425 PF07499 RuvA, C-terminal domain IOD66_06425 PF01330 RuvA N terminal domain IOD66_06430 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_06435 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_06440 PF00005 ABC transporter IOD66_06440 PF08402 TOBE domain IOD66_06445 PF00580 UvrD/REP helicase N-terminal domain IOD66_06445 PF13361 UvrD-like helicase C-terminal domain IOD66_06450 PF01026 TatD related DNase IOD66_06455 PF02151 UvrB/uvrC motif IOD66_06455 PF08459 UvrC Helix-hairpin-helix N-terminal IOD66_06455 PF01541 GIY-YIG catalytic domain IOD66_06465 PF01066 CDP-alcohol phosphatidyltransferase IOD66_06470 PF01027 Inhibitor of apoptosis-promoting Bax1 IOD66_06475 PF04358 DsrC like protein IOD66_06480 PF01297 Zinc-uptake complex component A periplasmic IOD66_06485 PF00005 ABC transporter IOD66_06490 PF04073 Aminoacyl-tRNA editing domain IOD66_06495 PF00291 Pyridoxal-phosphate dependent enzyme IOD66_06500 PF01042 Endoribonuclease L-PSP IOD66_06510 PF00156 Phosphoribosyl transferase domain IOD66_06515 PF12170 DNA polymerase III tau subunit V interacting with alpha IOD66_06515 PF12169 DNA polymerase III subunits gamma and tau domain III IOD66_06520 PF00005 ABC transporter IOD66_06525 PF01061 ABC-2 type transporter IOD66_06535 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_06540 PF00005 ABC transporter IOD66_06540 PF03459 TOBE domain IOD66_06545 PF03364 Polyketide cyclase / dehydrase and lipid transport IOD66_06550 PF03658 RnfH family Ubiquitin IOD66_06555 PF02321 Outer membrane efflux protein IOD66_06560 PF00625 Guanylate kinase IOD66_06565 PF00156 Phosphoribosyl transferase domain IOD66_06570 PF07687 Peptidase dimerisation domain IOD66_06570 PF01546 Peptidase family M20/M25/M40 IOD66_06595 PF13538 UvrD-like helicase C-terminal domain IOD66_06600 PF01168 Alanine racemase, N-terminal domain IOD66_06600 PF00842 Alanine racemase, C-terminal domain IOD66_06605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IOD66_06605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IOD66_06610 PF00696 Amino acid kinase family IOD66_06610 PF01842 ACT domain IOD66_06610 PF13840 ACT domain IOD66_06610 PF00742 Homoserine dehydrogenase IOD66_06610 PF03447 Homoserine dehydrogenase, NAD binding domain IOD66_06615 PF08544 GHMP kinases C terminal IOD66_06615 PF00288 GHMP kinases N terminal domain IOD66_06620 PF00291 Pyridoxal-phosphate dependent enzyme IOD66_06625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IOD66_06625 PF07498 Rho termination factor, N-terminal domain IOD66_06625 PF07497 Rho termination factor, RNA-binding domain IOD66_06635 PF17484 N-Lobe handle Tf-binding protein B IOD66_06635 PF17483 C-lobe handle domain of Tf-binding protein B IOD66_06635 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B IOD66_06640 PF00202 Aminotransferase class-III IOD66_06645 PF00696 Amino acid kinase family IOD66_06650 PF01118 Semialdehyde dehydrogenase, NAD binding domain IOD66_06655 PF00293 NUDIX domain IOD66_06665 PF02810 SEC-C motif IOD66_06665 PF01043 SecA preprotein cross-linking domain IOD66_06665 PF07516 SecA Wing and Scaffold domain IOD66_06665 PF07517 SecA DEAD-like domain IOD66_06690 PF01722 BolA-like protein IOD66_06700 PF04452 RNA methyltransferase IOD66_06705 PF02622 Uncharacterized ACR, COG1678 IOD66_06710 PF03652 Holliday junction resolvase IOD66_06715 PF00300 Histidine phosphatase superfamily (branch 1) IOD66_06720 PF00849 RNA pseudouridylate synthase IOD66_06725 PF00571 CBS domain IOD66_06725 PF03471 Transporter associated domain IOD66_06725 PF01595 Cyclin M transmembrane N-terminal domain IOD66_06740 PF00453 Ribosomal protein L20 IOD66_06745 PF01632 Ribosomal protein L35 IOD66_06750 PF00707 Translation initiation factor IF-3, C-terminal domain IOD66_06750 PF05198 Translation initiation factor IF-3, N-terminal domain IOD66_06755 PF05643 Putative bacterial lipoprotein (DUF799) IOD66_06765 PF03783 Curli production assembly/transport component CsgG IOD66_06770 PF03129 Anticodon binding domain IOD66_06770 PF02824 TGS domain IOD66_06770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IOD66_06770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IOD66_06780 PF09614 CRISPR-associated protein (Cas_Csy2) IOD66_06785 PF09615 CRISPR-associated protein (Cas_Csy3) IOD66_06795 PF01867 CRISPR associated protein Cas1 IOD66_06800 PF18019 HD domain IOD66_06805 PF01513 ATP-NAD kinase IOD66_06810 PF00464 Serine hydroxymethyltransferase IOD66_06820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IOD66_06820 PF02780 Transketolase, C-terminal domain IOD66_06820 PF02779 Transketolase, pyrimidine binding domain IOD66_06825 PF00459 Inositol monophosphatase family IOD66_06830 PF00588 SpoU rRNA Methylase family IOD66_06830 PF08032 RNA 2'-O ribose methyltransferase substrate binding IOD66_06835 PF01810 LysE type translocator IOD66_06840 PF04608 Phosphatidylglycerophosphatase A IOD66_06845 PF02769 AIR synthase related protein, C-terminal domain IOD66_06845 PF00586 AIR synthase related protein, N-terminal domain IOD66_06850 PF01029 NusB family IOD66_06855 PF00263 Bacterial type II and III secretion system protein IOD66_06855 PF03958 Bacterial type II/III secretion system short domain IOD66_06875 PF11104 Type IV pilus assembly protein PilM; IOD66_06880 PF00905 Penicillin binding protein transpeptidase domain IOD66_06880 PF00912 Transglycosylase IOD66_06880 PF17092 Penicillin-binding protein OB-like domain IOD66_06885 PF01202 Shikimate kinase IOD66_06890 PF01761 3-dehydroquinate synthase IOD66_06895 PF02086 D12 class N6 adenine-specific DNA methyltransferase IOD66_06900 PF00209 Sodium:neurotransmitter symporter family IOD66_06905 PF02954 Bacterial regulatory protein, Fis family IOD66_06910 PF01207 Dihydrouridine synthase (Dus) IOD66_06915 PF00300 Histidine phosphatase superfamily (branch 1) IOD66_06920 PF00224 Pyruvate kinase, barrel domain IOD66_06920 PF02887 Pyruvate kinase, alpha/beta domain IOD66_06925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IOD66_06930 PF00793 DAHP synthetase I family IOD66_06935 PF01817 Chorismate mutase type II IOD66_06935 PF02153 Prephenate dehydrogenase IOD66_06945 PF00929 Exonuclease IOD66_06950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD66_06960 PF11739 Dicarboxylate transport IOD66_06970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IOD66_06975 PF01743 Poly A polymerase head domain IOD66_06975 PF12626 Polymerase A arginine-rich C-terminus IOD66_06975 PF12627 Probable RNA and SrmB- binding site of polymerase A IOD66_06980 PF01258 Prokaryotic dksA/traR C4-type zinc finger IOD66_06995 PF03279 Bacterial lipid A biosynthesis acyltransferase IOD66_07000 PF02508 Rnf-Nqr subunit, membrane protein IOD66_07005 PF04205 FMN-binding domain IOD66_07010 PF03116 NQR2, RnfD, RnfE family IOD66_07015 PF03458 UPF0126 domain IOD66_07020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IOD66_07020 PF12838 4Fe-4S dicluster domain IOD66_07020 PF13375 RnfC Barrel sandwich hybrid domain IOD66_07025 PF04060 Putative Fe-S cluster IOD66_07030 PF02508 Rnf-Nqr subunit, membrane protein IOD66_07045 PF13419 Haloacid dehalogenase-like hydrolase IOD66_07050 PF04381 Putative exonuclease, RdgC IOD66_07055 PF03807 NADP oxidoreductase coenzyme F420-dependent IOD66_07055 PF14748 Pyrroline-5-carboxylate reductase dimerisation IOD66_07060 PF12832 MFS_1 like family IOD66_07070 PF04400 (Na+)-NQR maturation NqrM IOD66_07075 PF02424 ApbE family IOD66_07080 PF00175 Oxidoreductase NAD-binding domain IOD66_07080 PF00970 Oxidoreductase FAD-binding domain IOD66_07080 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD66_07085 PF02508 Rnf-Nqr subunit, membrane protein IOD66_07090 PF02508 Rnf-Nqr subunit, membrane protein IOD66_07095 PF04205 FMN-binding domain IOD66_07100 PF03116 NQR2, RnfD, RnfE family IOD66_07105 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IOD66_07105 PF11973 NQRA C-terminal domain IOD66_07110 PF01521 Iron-sulphur cluster biosynthesis IOD66_07110 PF01106 NifU-like domain IOD66_07115 PF03477 ATP cone domain IOD66_07115 PF02867 Ribonucleotide reductase, barrel domain IOD66_07115 PF00317 Ribonucleotide reductase, all-alpha domain IOD66_07125 PF01207 Dihydrouridine synthase (Dus) IOD66_07130 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IOD66_07130 PF11892 Domain of unknown function (DUF3412) IOD66_07130 PF03641 Possible lysine decarboxylase IOD66_07135 PF11398 Protein of unknown function (DUF2813) IOD66_07140 PF00708 Acylphosphatase IOD66_07145 PF02595 Glycerate kinase family IOD66_07150 PF02447 GntP family permease IOD66_07155 PF05651 Putative sugar diacid recognition IOD66_07155 PF17853 GGDEF-like domain IOD66_07155 PF13556 PucR C-terminal helix-turn-helix domain IOD66_07160 PF00330 Aconitase family (aconitate hydratase) IOD66_07165 PF00694 Aconitase C-terminal domain IOD66_07170 PF10063 Uncharacterized integral membrane protein (DUF2301) IOD66_07175 PF00117 Glutamine amidotransferase class-I IOD66_07175 PF06418 CTP synthase N-terminus IOD66_07180 PF00710 Asparaginase, N-terminal IOD66_07180 PF17763 Glutaminase/Asparaginase C-terminal domain IOD66_07190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_07190 PF03466 LysR substrate binding domain IOD66_07195 PF13419 Haloacid dehalogenase-like hydrolase IOD66_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_07200 PF03466 LysR substrate binding domain IOD66_07205 PF03193 RsgA GTPase IOD66_07210 PF01351 Ribonuclease HII IOD66_07215 PF00950 ABC 3 transport family IOD66_07220 PF00950 ABC 3 transport family IOD66_07225 PF01230 HIT domain IOD66_07240 PF00753 Metallo-beta-lactamase superfamily IOD66_07245 PF05951 Bacterial protein of unknown function (DUF882) IOD66_07250 PF03734 L,D-transpeptidase catalytic domain IOD66_07255 PF17804 Tail specific protease N-terminal domain IOD66_07255 PF03572 Peptidase family S41 IOD66_07255 PF11818 C-terminal domain of tail specific protease (DUF3340) IOD66_07255 PF00595 PDZ domain IOD66_07260 PF04352 ProQ/FINO family IOD66_07265 PF00313 'Cold-shock' DNA-binding domain IOD66_07270 PF06968 Biotin and Thiamin Synthesis associated domain IOD66_07270 PF04055 Radical SAM superfamily IOD66_07280 PF00303 Thymidylate synthase IOD66_07285 PF00216 Bacterial DNA-binding protein IOD66_07290 PF04222 Protein of unknown function (DUF416) IOD66_07295 PF01208 Uroporphyrinogen decarboxylase (URO-D) IOD66_07300 PF03695 Uncharacterised protein family (UPF0149) IOD66_07305 PF05164 Cell division protein ZapA IOD66_07315 PF01812 5-formyltetrahydrofolate cyclo-ligase family IOD66_07320 PF09339 IclR helix-turn-helix domain IOD66_07320 PF01614 Bacterial transcriptional regulator IOD66_07325 PF00474 Sodium:solute symporter family IOD66_07330 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IOD66_07330 PF00171 Aldehyde dehydrogenase family IOD66_07330 PF01619 Proline dehydrogenase IOD66_07330 PF14850 DNA-binding domain of Proline dehydrogenase IOD66_07335 PF00860 Permease family IOD66_07340 PF05658 Head domain of trimeric autotransporter adhesin IOD66_07340 PF05662 Coiled stalk of trimeric autotransporter adhesin IOD66_07340 PF03895 YadA-like membrane anchor domain IOD66_07350 PF03916 Polysulphide reductase, NrfD IOD66_07355 PF13247 4Fe-4S dicluster domain IOD66_07365 PF02335 Cytochrome c552 IOD66_07370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IOD66_07370 PF00205 Thiamine pyrophosphate enzyme, central domain IOD66_07370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IOD66_07380 PF00920 Dehydratase family IOD66_07385 PF02535 ZIP Zinc transporter IOD66_07395 PF01926 50S ribosome-binding GTPase IOD66_07400 PF06877 Regulator of ribonuclease activity B IOD66_07405 PF01206 Sulfurtransferase TusA IOD66_07410 PF00557 Metallopeptidase family M24 IOD66_07415 PF04186 FxsA cytoplasmic membrane protein IOD66_07425 PF00849 RNA pseudouridylate synthase IOD66_07430 PF09297 NADH pyrophosphatase zinc ribbon domain IOD66_07430 PF00293 NUDIX domain IOD66_07435 PF06078 Bacterial protein of unknown function (DUF937) IOD66_07440 PF02348 Cytidylyltransferase IOD66_07445 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD66_07450 PF02733 Dak1 domain IOD66_07455 PF02734 DAK2 domain IOD66_07460 PF03610 PTS system fructose IIA component IOD66_07460 PF05524 PEP-utilising enzyme, N-terminal IOD66_07460 PF00391 PEP-utilising enzyme, mobile domain IOD66_07460 PF00381 PTS HPr component phosphorylation site IOD66_07470 PF00581 Rhodanese-like domain IOD66_07475 PF01618 MotA/TolQ/ExbB proton channel family IOD66_07480 PF02472 Biopolymer transport protein ExbD/TolR IOD66_07485 PF03544 Gram-negative bacterial TonB protein C-terminal IOD66_07490 PF02575 YbaB/EbfC DNA-binding family IOD66_07495 PF02132 RecR protein IOD66_07495 PF13662 Toprim domain IOD66_07500 PF00462 Glutaredoxin IOD66_07505 PF01063 Amino-transferase class IV IOD66_07510 PF01042 Endoribonuclease L-PSP IOD66_07520 PF06146 Phosphate-starvation-inducible E IOD66_07525 PF00005 ABC transporter IOD66_07525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IOD66_07535 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_07535 PF12911 N-terminal TM domain of oligopeptide transport permease C IOD66_07540 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_07545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD66_07550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD66_07590 PF04277 Oxaloacetate decarboxylase, gamma chain IOD66_07595 PF02436 Conserved carboxylase domain IOD66_07595 PF00682 HMGL-like IOD66_07595 PF00364 Biotin-requiring enzyme IOD66_07600 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IOD66_07605 PF03831 PhnA domain IOD66_07605 PF08274 PhnA Zinc-Ribbon IOD66_07610 PF00034 Cytochrome c IOD66_07610 PF14376 Haem-binding domain IOD66_07610 PF03150 Di-haem cytochrome c peroxidase IOD66_07615 PF02594 Uncharacterised ACR, YggU family COG1872 IOD66_07620 PF02325 YGGT family IOD66_07625 PF04320 Protein with unknown function (DUF469) IOD66_07630 PF02390 Putative methyltransferase IOD66_07635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IOD66_07635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IOD66_07640 PF02504 Fatty acid synthesis protein IOD66_07645 PF01783 Ribosomal L32p protein family IOD66_07650 PF02620 Large ribosomal RNA subunit accumulation protein YceD IOD66_07655 PF01578 Cytochrome C assembly protein IOD66_07660 PF01595 Cyclin M transmembrane N-terminal domain IOD66_07660 PF03471 Transporter associated domain IOD66_07660 PF00571 CBS domain IOD66_07665 PF00209 Sodium:neurotransmitter symporter family IOD66_07675 PF03830 PTS system sorbose subfamily IIB component IOD66_07675 PF03610 PTS system fructose IIA component IOD66_07680 PF03609 PTS system sorbose-specific iic component IOD66_07685 PF03613 PTS system mannose/fructose/sorbose family IID component IOD66_07690 PF06173 Protein of unknown function (DUF986) IOD66_07695 PF01238 Phosphomannose isomerase type I IOD66_07710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IOD66_07710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IOD66_07715 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IOD66_07720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IOD66_07720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IOD66_07720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IOD66_07720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IOD66_07725 PF00585 C-terminal regulatory domain of Threonine dehydratase IOD66_07725 PF00291 Pyridoxal-phosphate dependent enzyme IOD66_07730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD66_07740 PF00230 Major intrinsic protein IOD66_07750 PF01980 tRNA-methyltransferase O IOD66_07750 PF18389 TrmO C-terminal domain IOD66_07755 PF17761 DUF1016 N-terminal domain IOD66_07755 PF06250 YhcG PDDEXK nuclease domain IOD66_07760 PF01040 UbiA prenyltransferase family IOD66_07765 PF01521 Iron-sulphur cluster biosynthesis IOD66_07770 PF01061 ABC-2 type transporter IOD66_07775 PF00005 ABC transporter IOD66_07785 PF01501 Glycosyl transferase family 8 IOD66_07785 PF00535 Glycosyl transferase family 2 IOD66_07790 PF03275 UDP-galactopyranose mutase IOD66_07800 PF00795 Carbon-nitrogen hydrolase IOD66_07800 PF00535 Glycosyl transferase family 2 IOD66_07810 PF02397 Bacterial sugar transferase IOD66_07815 PF16363 GDP-mannose 4,6 dehydratase IOD66_07820 PF01165 Ribosomal protein S21 IOD66_07825 PF10410 DnaB-helicase binding domain of primase IOD66_07825 PF08278 DNA primase DnaG DnaB-binding IOD66_07825 PF08275 DNA primase catalytic core, N-terminal domain IOD66_07825 PF01807 CHC2 zinc finger IOD66_07830 PF00140 Sigma-70 factor, region 1.2 IOD66_07830 PF04546 Sigma-70, non-essential region IOD66_07830 PF03979 Sigma-70 factor, region 1.1 IOD66_07830 PF04539 Sigma-70 region 3 IOD66_07830 PF04542 Sigma-70 region 2 IOD66_07830 PF04545 Sigma-70, region 4 IOD66_07835 PF01479 S4 domain IOD66_07835 PF00579 tRNA synthetases class I (W and Y) IOD66_07845 PF08206 Ribonuclease B OB domain IOD66_07845 PF08461 Ribonuclease R winged-helix domain IOD66_07845 PF00773 RNB domain IOD66_07845 PF00575 S1 RNA binding domain IOD66_07845 PF17876 Cold shock domain IOD66_07850 PF00578 AhpC/TSA family IOD66_07855 PF00440 Bacterial regulatory proteins, tetR family IOD66_07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_07860 PF03466 LysR substrate binding domain IOD66_07865 PF00462 Glutaredoxin IOD66_07865 PF08534 Redoxin IOD66_07875 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IOD66_07880 PF01225 Mur ligase family, catalytic domain IOD66_07880 PF08245 Mur ligase middle domain IOD66_07880 PF02875 Mur ligase family, glutamate ligase domain IOD66_07885 PF00005 ABC transporter IOD66_07885 PF08402 TOBE domain IOD66_07890 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_07900 PF02794 RTX toxin acyltransferase family IOD66_07905 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IOD66_07905 PF02382 N-terminal domain in RTX protein IOD66_07905 PF08339 RTX C-terminal domain IOD66_07910 PF00664 ABC transporter transmembrane region IOD66_07910 PF00005 ABC transporter IOD66_07910 PF03412 Peptidase C39 family IOD66_07925 PF01297 Zinc-uptake complex component A periplasmic IOD66_07930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IOD66_07935 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family IOD66_07945 PF10150 Ribonuclease E/G family IOD66_07945 PF00575 S1 RNA binding domain IOD66_07945 PF12111 Polyribonucleotide phosphorylase C terminal IOD66_07960 PF02525 Flavodoxin-like fold IOD66_07965 PF13187 4Fe-4S dicluster domain IOD66_07965 PF12838 4Fe-4S dicluster domain IOD66_07975 PF00384 Molybdopterin oxidoreductase IOD66_07975 PF01568 Molydopterin dinucleotide binding domain IOD66_07975 PF10518 TAT (twin-arginine translocation) pathway signal sequence IOD66_07975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IOD66_07980 PF12800 4Fe-4S binding domain IOD66_07980 PF12838 4Fe-4S dicluster domain IOD66_07985 PF12837 4Fe-4S binding domain IOD66_07985 PF12801 4Fe-4S binding domain IOD66_07990 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IOD66_07995 PF03264 NapC/NirT cytochrome c family, N-terminal region IOD66_08000 PF14849 YidC periplasmic domain IOD66_08000 PF02096 60Kd inner membrane protein IOD66_08005 PF03061 Thioesterase superfamily IOD66_08010 PF02913 FAD linked oxidases, C-terminal domain IOD66_08010 PF01565 FAD binding domain IOD66_08010 PF13183 4Fe-4S dicluster domain IOD66_08015 PF01389 OmpA-like transmembrane domain IOD66_08015 PF00691 OmpA family IOD66_08020 PF13407 Periplasmic binding protein domain IOD66_08025 PF00005 ABC transporter IOD66_08030 PF02653 Branched-chain amino acid transport system / permease component IOD66_08050 PF06039 Malate:quinone oxidoreductase (Mqo) IOD66_08055 PF00501 AMP-binding enzyme IOD66_08060 PF00248 Aldo/keto reductase family IOD66_08065 PF04175 Protein of unknown function (DUF406) IOD66_08070 PF03222 Tryptophan/tyrosine permease family IOD66_08080 PF02655 ATP-grasp domain IOD66_08080 PF18419 ATP-grasp-like domain IOD66_08080 PF04262 Glutamate-cysteine ligase IOD66_08085 PF02666 Phosphatidylserine decarboxylase IOD66_08095 PF04225 Opacity-associated protein A LysM-like domain IOD66_08095 PF08525 Opacity-associated protein A N-terminal motif IOD66_08105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IOD66_08110 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IOD66_08115 PF00164 Ribosomal protein S12/S23 IOD66_08120 PF00177 Ribosomal protein S7p/S5e IOD66_08125 PF00679 Elongation factor G C-terminus IOD66_08125 PF03764 Elongation factor G, domain IV IOD66_08125 PF00009 Elongation factor Tu GTP binding domain IOD66_08125 PF03144 Elongation factor Tu domain 2 IOD66_08125 PF14492 Elongation Factor G, domain II IOD66_08130 PF00009 Elongation factor Tu GTP binding domain IOD66_08130 PF03144 Elongation factor Tu domain 2 IOD66_08130 PF03143 Elongation factor Tu C-terminal domain IOD66_08145 PF08543 Phosphomethylpyrimidine kinase IOD66_08155 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IOD66_08160 PF07732 Multicopper oxidase IOD66_08160 PF07731 Multicopper oxidase IOD66_08165 PF01553 Acyltransferase IOD66_08170 PF08534 Redoxin IOD66_08175 PF01926 50S ribosome-binding GTPase IOD66_08175 PF10396 GTP-binding protein TrmE N-terminus IOD66_08175 PF12631 MnmE helical domain IOD66_08180 PF05167 Uncharacterised ACR (DUF711) IOD66_08190 PF17954 Quercetinase C-terminal cupin domain IOD66_08190 PF02678 Pirin IOD66_08195 PF00210 Ferritin-like domain IOD66_08210 PF12805 FUSC-like inner membrane protein yccS IOD66_08215 PF02142 MGS-like domain IOD66_08220 PF00291 Pyridoxal-phosphate dependent enzyme IOD66_08220 PF14821 Threonine synthase N terminus IOD66_08230 PF00133 tRNA synthetases class I (I, L, M and V) IOD66_08230 PF10458 Valyl tRNA synthetase tRNA binding arm IOD66_08230 PF08264 Anticodon-binding domain of tRNA IOD66_08245 PF13673 Acetyltransferase (GNAT) domain IOD66_08250 PF04364 DNA polymerase III chi subunit, HolC IOD66_08255 PF01476 LysM domain IOD66_08260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD66_08260 PF05698 Bacterial trigger factor protein (TF) C-terminus IOD66_08260 PF05697 Bacterial trigger factor protein (TF) IOD66_08265 PF00581 Rhodanese-like domain IOD66_08270 PF02556 Preprotein translocase subunit SecB IOD66_08275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IOD66_08275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IOD66_08280 PF06426 Serine acetyltransferase, N-terminal IOD66_08280 PF00132 Bacterial transferase hexapeptide (six repeats) IOD66_08285 PF03143 Elongation factor Tu C-terminal domain IOD66_08285 PF00009 Elongation factor Tu GTP binding domain IOD66_08285 PF03144 Elongation factor Tu domain 2 IOD66_08310 PF00485 Phosphoribulokinase / Uridine kinase family IOD66_08315 PF08534 Redoxin IOD66_08320 PF03918 Cytochrome C biogenesis protein IOD66_08325 PF03918 Cytochrome C biogenesis protein IOD66_08330 PF00994 Probable molybdopterin binding domain IOD66_08335 PF00543 Nitrogen regulatory protein P-II IOD66_08340 PF01252 Signal peptidase (SPase) II IOD66_08345 PF02401 LytB protein IOD66_08350 PF03937 Flavinator of succinate dehydrogenase IOD66_08360 PF04055 Radical SAM superfamily IOD66_08365 PF00043 Glutathione S-transferase, C-terminal domain IOD66_08365 PF02798 Glutathione S-transferase, N-terminal domain IOD66_08370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IOD66_08370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IOD66_08380 PF02313 Fumarate reductase subunit D IOD66_08385 PF02300 Fumarate reductase subunit C IOD66_08390 PF13085 2Fe-2S iron-sulfur cluster binding domain IOD66_08390 PF13183 4Fe-4S dicluster domain IOD66_08395 PF02910 Fumarate reductase flavoprotein C-term IOD66_08395 PF00890 FAD binding domain IOD66_08400 PF00152 tRNA synthetases class II (D, K and N) IOD66_08405 PF01678 Diaminopimelate epimerase IOD66_08410 PF03605 Anaerobic c4-dicarboxylate membrane transporter IOD66_08415 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IOD66_08425 PF03702 Anhydro-N-acetylmuramic acid kinase IOD66_08430 PF01380 SIS domain IOD66_08450 PF01523 Putative modulator of DNA gyrase IOD66_08455 PF01171 PP-loop family IOD66_08455 PF11734 TilS substrate C-terminal domain IOD66_08455 PF09179 TilS substrate binding domain IOD66_08465 PF02899 Phage integrase, N-terminal SAM-like domain IOD66_08465 PF00589 Phage integrase family IOD66_08510 PF01177 Asp/Glu/Hydantoin racemase IOD66_08515 PF04345 Chorismate lyase IOD66_08520 PF01048 Phosphorylase superfamily IOD66_08525 PF13404 AsnC-type helix-turn-helix domain IOD66_08525 PF01037 Lrp/AsnC ligand binding domain IOD66_08530 PF03590 Aspartate-ammonia ligase IOD66_08545 PF05930 Prophage CP4-57 regulatory protein (AlpA) IOD66_08575 PF13018 Extended Signal Peptide of Type V secretion system IOD66_08575 PF04829 Pre-toxin domain with VENN motif IOD66_08575 PF05860 haemagglutination activity domain IOD66_08575 PF13332 Hemagglutinin repeat IOD66_08575 PF13018 Extended Signal Peptide of Type V secretion system IOD66_08575 PF05860 haemagglutination activity domain IOD66_08575 PF04829 Pre-toxin domain with VENN motif IOD66_08575 PF13332 Hemagglutinin repeat IOD66_08580 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IOD66_08580 PF17287 POTRA domain IOD66_08580 PF08479 POTRA domain, ShlB-type IOD66_08590 PF12833 Helix-turn-helix domain IOD66_08595 PF00440 Bacterial regulatory proteins, tetR family IOD66_08600 PF07690 Major Facilitator Superfamily IOD66_08625 PF03616 Sodium/glutamate symporter IOD66_08650 PF13356 Arm DNA-binding domain IOD66_08650 PF00589 Phage integrase family IOD66_08660 PF07690 Major Facilitator Superfamily IOD66_08665 PF04545 Sigma-70, region 4 IOD66_08665 PF04542 Sigma-70 region 2 IOD66_08665 PF00140 Sigma-70 factor, region 1.2 IOD66_08670 PF01794 Ferric reductase like transmembrane component IOD66_08675 PF00174 Oxidoreductase molybdopterin binding domain IOD66_08680 PF08281 Sigma-70, region 4 IOD66_08680 PF04542 Sigma-70 region 2 IOD66_08685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IOD66_08685 PF04073 Aminoacyl-tRNA editing domain IOD66_08685 PF03129 Anticodon binding domain IOD66_08700 PF00270 DEAD/DEAH box helicase IOD66_08700 PF00271 Helicase conserved C-terminal domain IOD66_08700 PF17191 RecG wedge domain IOD66_08705 PF01192 RNA polymerase Rpb6 IOD66_08710 PF13291 ACT domain IOD66_08710 PF04607 Region found in RelA / SpoT proteins IOD66_08710 PF02824 TGS domain IOD66_08715 PF00378 Enoyl-CoA hydratase/isomerase IOD66_08720 PF14814 Bifunctional transglycosylase second domain IOD66_08720 PF00905 Penicillin binding protein transpeptidase domain IOD66_08720 PF00912 Transglycosylase IOD66_08725 PF00444 Ribosomal protein L36 IOD66_08730 PF01197 Ribosomal protein L31 IOD66_08735 PF00834 Ribulose-phosphate 3 epimerase family IOD66_08740 PF00550 Phosphopantetheine attachment site IOD66_08760 PF02618 YceG-like family IOD66_08765 PF02223 Thymidylate kinase IOD66_08770 PF09115 DNA polymerase III, delta subunit, C terminal IOD66_08775 PF06629 MltA-interacting protein MipA IOD66_08780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD66_08785 PF12704 MacB-like periplasmic core domain IOD66_08785 PF02687 FtsX-like permease family IOD66_08785 PF00005 ABC transporter IOD66_08795 PF01026 TatD related DNase IOD66_08800 PF07509 Protein of unknown function (DUF1523) IOD66_08805 PF00149 Calcineurin-like phosphoesterase IOD66_08810 PF00535 Glycosyl transferase family 2 IOD66_08820 PF00589 Phage integrase family IOD66_08820 PF02899 Phage integrase, N-terminal SAM-like domain IOD66_08825 PF17347 Family of unknown function (DUF5377) IOD66_08830 PF05746 DALR anticodon binding domain IOD66_08830 PF02092 Glycyl-tRNA synthetase beta subunit IOD66_08840 PF04480 Protein of unknown function (DUF559) IOD66_08845 PF02091 Glycyl-tRNA synthetase alpha subunit IOD66_08855 PF18364 Molybdopterin oxidoreductase N-terminal domain IOD66_08855 PF00384 Molybdopterin oxidoreductase IOD66_08855 PF01568 Molydopterin dinucleotide binding domain IOD66_08860 PF02613 Nitrate reductase delta subunit IOD66_08875 PF00127 Copper binding proteins, plastocyanin/azurin family IOD66_08880 PF00005 ABC transporter IOD66_08885 PF01032 FecCD transport family IOD66_08890 PF01497 Periplasmic binding protein IOD66_08895 PF08007 Cupin superfamily protein IOD66_08900 PF01245 Ribosomal protein L19 IOD66_08905 PF01746 tRNA (Guanine-1)-methyltransferase IOD66_08910 PF01782 RimM N-terminal domain IOD66_08910 PF05239 PRC-barrel domain IOD66_08915 PF00886 Ribosomal protein S16 IOD66_08920 PF01196 Ribosomal protein L17 IOD66_08925 PF01000 RNA polymerase Rpb3/RpoA insert domain IOD66_08925 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IOD66_08925 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IOD66_08930 PF01479 S4 domain IOD66_08930 PF00163 Ribosomal protein S4/S9 N-terminal domain IOD66_08935 PF00411 Ribosomal protein S11 IOD66_08940 PF00416 Ribosomal protein S13/S18 IOD66_08945 PF00444 Ribosomal protein L36 IOD66_08950 PF00344 SecY translocase IOD66_08955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IOD66_08960 PF00327 Ribosomal protein L30p/L7e IOD66_08965 PF03719 Ribosomal protein S5, C-terminal domain IOD66_08965 PF00333 Ribosomal protein S5, N-terminal domain IOD66_08970 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IOD66_08975 PF00347 Ribosomal protein L6 IOD66_08980 PF00410 Ribosomal protein S8 IOD66_08985 PF00253 Ribosomal protein S14p/S29e IOD66_08990 PF00673 ribosomal L5P family C-terminus IOD66_08990 PF00281 Ribosomal protein L5 IOD66_08995 PF00467 KOW motif IOD66_08995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IOD66_09000 PF00238 Ribosomal protein L14p/L23e IOD66_09005 PF00366 Ribosomal protein S17 IOD66_09010 PF00831 Ribosomal L29 protein IOD66_09015 PF00252 Ribosomal protein L16p/L10e IOD66_09020 PF07650 KH domain IOD66_09020 PF00189 Ribosomal protein S3, C-terminal domain IOD66_09025 PF00237 Ribosomal protein L22p/L17e IOD66_09030 PF00203 Ribosomal protein S19 IOD66_09035 PF00181 Ribosomal Proteins L2, RNA binding domain IOD66_09035 PF03947 Ribosomal Proteins L2, C-terminal domain IOD66_09040 PF00276 Ribosomal protein L23 IOD66_09045 PF00573 Ribosomal protein L4/L1 family IOD66_09050 PF00297 Ribosomal protein L3 IOD66_09055 PF00338 Ribosomal protein S10p/S20e IOD66_09065 PF00206 Lyase IOD66_09065 PF10415 Fumarase C C-terminus IOD66_09070 PF01979 Amidohydrolase family IOD66_09075 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IOD66_09080 PF00701 Dihydrodipicolinate synthetase family IOD66_09085 PF00480 ROK family IOD66_09090 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase IOD66_09095 PF13472 GDSL-like Lipase/Acylhydrolase family IOD66_09095 PF02348 Cytidylyltransferase IOD66_09100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IOD66_09100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IOD66_09100 PF16582 Middle domain of thiamine pyrophosphate IOD66_09105 PF00561 alpha/beta hydrolase fold IOD66_09115 PF13335 Magnesium chelatase, subunit ChlI C-terminal IOD66_09115 PF01078 Magnesium chelatase, subunit ChlI IOD66_09120 PF05973 Phage derived protein Gp49-like (DUF891) IOD66_09125 PF01381 Helix-turn-helix IOD66_09130 PF01494 FAD binding domain IOD66_09135 PF00149 Calcineurin-like phosphoesterase IOD66_09135 PF02872 5'-nucleotidase, C-terminal domain IOD66_09140 PF02978 Signal peptide binding domain IOD66_09140 PF02881 SRP54-type protein, helical bundle domain IOD66_09140 PF00448 SRP54-type protein, GTPase domain IOD66_09170 PF04362 Bacterial Fe(2+) trafficking IOD66_09175 PF00730 HhH-GPD superfamily base excision DNA repair protein IOD66_09175 PF14815 NUDIX domain IOD66_09180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD66_09185 PF17746 SfsA N-terminal OB domain IOD66_09185 PF03749 Sugar fermentation stimulation protein RE domain IOD66_09190 PF00227 Proteasome subunit IOD66_09195 PF10431 C-terminal, D2-small domain, of ClpB protein IOD66_09195 PF07724 AAA domain (Cdc48 subfamily) IOD66_09195 PF00004 ATPase family associated with various cellular activities (AAA) IOD66_09215 PF01850 PIN domain IOD66_09220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IOD66_09230 PF04997 RNA polymerase Rpb1, domain 1 IOD66_09230 PF00623 RNA polymerase Rpb1, domain 2 IOD66_09230 PF04983 RNA polymerase Rpb1, domain 3 IOD66_09230 PF05000 RNA polymerase Rpb1, domain 4 IOD66_09230 PF04998 RNA polymerase Rpb1, domain 5 IOD66_09235 PF04561 RNA polymerase Rpb2, domain 2 IOD66_09235 PF04565 RNA polymerase Rpb2, domain 3 IOD66_09235 PF10385 RNA polymerase beta subunit external 1 domain IOD66_09235 PF00562 RNA polymerase Rpb2, domain 6 IOD66_09235 PF04560 RNA polymerase Rpb2, domain 7 IOD66_09235 PF04563 RNA polymerase beta subunit IOD66_09280 PF00542 Ribosomal protein L7/L12 C-terminal domain IOD66_09280 PF16320 Ribosomal protein L7/L12 dimerisation domain IOD66_09285 PF00466 Ribosomal protein L10 IOD66_09290 PF00687 Ribosomal protein L1p/L10e family IOD66_09295 PF00298 Ribosomal protein L11, RNA binding domain IOD66_09295 PF03946 Ribosomal protein L11, N-terminal domain IOD66_09300 PF00467 KOW motif IOD66_09300 PF02357 Transcription termination factor nusG IOD66_09305 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IOD66_09315 PF03611 PTS system sugar-specific permease component IOD66_09320 PF03169 OPT oligopeptide transporter protein IOD66_09325 PF17782 DprA winged helix domain IOD66_09325 PF02481 DNA recombination-mediator protein A IOD66_09330 PF01327 Polypeptide deformylase IOD66_09335 PF01370 NAD dependent epimerase/dehydratase family IOD66_09360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IOD66_09360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD66_09365 PF00596 Class II Aldolase and Adducin N-terminal domain IOD66_09370 PF01261 Xylose isomerase-like TIM barrel IOD66_09375 PF00455 DeoR C terminal sensor domain IOD66_09375 PF08220 DeoR-like helix-turn-helix domain IOD66_09385 PF03611 PTS system sugar-specific permease component IOD66_09390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IOD66_09395 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IOD66_09405 PF05159 Capsule polysaccharide biosynthesis protein IOD66_09410 PF05159 Capsule polysaccharide biosynthesis protein IOD66_09415 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD66_09420 PF00005 ABC transporter IOD66_09425 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_09430 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_09435 PF07274 Protein of unknown function (DUF1440) IOD66_09440 PF00465 Iron-containing alcohol dehydrogenase IOD66_09445 PF07690 Major Facilitator Superfamily IOD66_09450 PF00596 Class II Aldolase and Adducin N-terminal domain IOD66_09455 PF05025 RbsD / FucU transport protein family IOD66_09460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IOD66_09460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IOD66_09465 PF07882 L-fucose isomerase, second N-terminal domain IOD66_09465 PF07881 L-fucose isomerase, first N-terminal domain IOD66_09465 PF02952 L-fucose isomerase, C-terminal domain IOD66_09470 PF00455 DeoR C terminal sensor domain IOD66_09470 PF08220 DeoR-like helix-turn-helix domain IOD66_09475 PF02769 AIR synthase related protein, C-terminal domain IOD66_09475 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IOD66_09475 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IOD66_09495 PF00037 4Fe-4S binding domain IOD66_09495 PF12838 4Fe-4S dicluster domain IOD66_09500 PF02613 Nitrate reductase delta subunit IOD66_09505 PF04976 DMSO reductase anchor subunit (DmsC) IOD66_09510 PF12800 4Fe-4S binding domain IOD66_09510 PF13247 4Fe-4S dicluster domain IOD66_09515 PF01568 Molydopterin dinucleotide binding domain IOD66_09515 PF00384 Molybdopterin oxidoreductase IOD66_09515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IOD66_09520 PF00294 pfkB family carbohydrate kinase IOD66_09525 PF13407 Periplasmic binding protein domain IOD66_09530 PF02653 Branched-chain amino acid transport system / permease component IOD66_09535 PF00005 ABC transporter IOD66_09540 PF05025 RbsD / FucU transport protein family IOD66_09545 PF00356 Bacterial regulatory proteins, lacI family IOD66_09550 PF00356 Bacterial regulatory proteins, lacI family IOD66_09550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IOD66_09555 PF01202 Shikimate kinase IOD66_09560 PF02447 GntP family permease IOD66_09565 PF00665 Integrase core domain IOD66_09565 PF13333 Integrase core domain IOD66_09570 PF03610 PTS system fructose IIA component IOD66_09570 PF03830 PTS system sorbose subfamily IIB component IOD66_09575 PF03609 PTS system sorbose-specific iic component IOD66_09580 PF03613 PTS system mannose/fructose/sorbose family IID component IOD66_09595 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD66_09605 PF01134 Glucose inhibited division protein A IOD66_09605 PF13932 GidA associated domain IOD66_09610 PF02527 rRNA small subunit methyltransferase G IOD66_09620 PF00119 ATP synthase A chain IOD66_09625 PF00137 ATP synthase subunit C IOD66_09630 PF00430 ATP synthase B/B' CF(0) IOD66_09635 PF00213 ATP synthase delta (OSCP) subunit IOD66_09640 PF02874 ATP synthase alpha/beta family, beta-barrel domain IOD66_09640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IOD66_09640 PF00306 ATP synthase alpha/beta chain, C terminal domain IOD66_09645 PF00231 ATP synthase IOD66_09650 PF02874 ATP synthase alpha/beta family, beta-barrel domain IOD66_09650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IOD66_09655 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IOD66_09680 PF04077 DsrH like protein IOD66_09685 PF02635 DsrE/DsrF-like family IOD66_09690 PF02635 DsrE/DsrF-like family IOD66_09695 PF08348 YheO-like PAS domain IOD66_09695 PF13309 HTH domain IOD66_09700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IOD66_09700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD66_09705 PF04102 SlyX IOD66_09715 PF01048 Phosphorylase superfamily IOD66_09720 PF00919 Uncharacterized protein family UPF0004 IOD66_09720 PF18693 TRAM domain IOD66_09720 PF04055 Radical SAM superfamily IOD66_09725 PF18071 HMW1C N-terminal IOD66_09725 PF18254 HMW1 domain 2 IOD66_09740 PF08220 DeoR-like helix-turn-helix domain IOD66_09740 PF00455 DeoR C terminal sensor domain IOD66_09745 PF01380 SIS domain IOD66_09750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IOD66_09750 PF02378 Phosphotransferase system, EIIC IOD66_09750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IOD66_09755 PF08125 Mannitol dehydrogenase C-terminal domain IOD66_09755 PF01232 Mannitol dehydrogenase Rossmann domain IOD66_09760 PF05068 Mannitol repressor IOD66_09765 PF02080 TrkA-C domain IOD66_09765 PF03600 Citrate transporter IOD66_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_09775 PF03466 LysR substrate binding domain IOD66_09780 PF10670 Domain of unknown function (DUF4198) IOD66_09790 PF01891 Cobalt uptake substrate-specific transmembrane region IOD66_09800 PF00005 ABC transporter IOD66_09810 PF00547 Urease, gamma subunit IOD66_09815 PF00699 Urease beta subunit IOD66_09820 PF01979 Amidohydrolase family IOD66_09820 PF00449 Urease alpha-subunit, N-terminal domain IOD66_09830 PF05194 UreE urease accessory protein, C-terminal domain IOD66_09830 PF02814 UreE urease accessory protein, N-terminal domain IOD66_09835 PF01730 UreF IOD66_09840 PF02492 CobW/HypB/UreG, nucleotide-binding domain IOD66_09845 PF01774 UreD urease accessory protein IOD66_09860 PF04175 Protein of unknown function (DUF406) IOD66_09865 PF00893 Small Multidrug Resistance protein IOD66_09870 PF01814 Hemerythrin HHE cation binding domain IOD66_09870 PF04405 Domain of Unknown function (DUF542) IOD66_09875 PF03313 Serine dehydratase alpha chain IOD66_09880 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_09885 PF00005 ABC transporter IOD66_09890 PF00488 MutS domain V IOD66_09890 PF05190 MutS family domain IV IOD66_09890 PF05192 MutS domain III IOD66_09890 PF05188 MutS domain II IOD66_09890 PF01624 MutS domain I IOD66_09900 PF02590 Predicted SPOUT methyltransferase IOD66_09905 PF00905 Penicillin binding protein transpeptidase domain IOD66_09905 PF03717 Penicillin-binding Protein dimerisation domain IOD66_09910 PF01098 Cell cycle protein IOD66_09915 PF03330 Lytic transglycolase IOD66_09920 PF07943 Penicillin-binding protein 5, C-terminal domain IOD66_09920 PF00768 D-alanyl-D-alanine carboxypeptidase IOD66_09925 PF04359 Protein of unknown function (DUF493) IOD66_09930 PF03099 Biotin/lipoate A/B protein ligase family IOD66_09935 PF04055 Radical SAM superfamily IOD66_09940 PF01741 Large-conductance mechanosensitive channel, MscL IOD66_09945 PF12724 Flavodoxin domain IOD66_09950 PF02386 Cation transport protein IOD66_09955 PF01205 Uncharacterized protein family UPF0029 IOD66_09955 PF09186 Domain of unknown function (DUF1949) IOD66_09965 PF00551 Formyl transferase IOD66_09965 PF02911 Formyl transferase, C-terminal domain IOD66_09970 PF00005 ABC transporter IOD66_09975 PF00005 ABC transporter IOD66_09980 PF01061 ABC-2 type transporter IOD66_09990 PF02563 Polysaccharide biosynthesis/export protein IOD66_10010 PF00793 DAHP synthetase I family IOD66_10015 PF02348 Cytidylyltransferase IOD66_10020 PF01380 SIS domain IOD66_10020 PF00571 CBS domain IOD66_10025 PF17311 Family of unknown function (DUF5358) IOD66_10030 PF06821 Serine hydrolase IOD66_10045 PF03956 Lysine exporter LysO IOD66_10055 PF01618 MotA/TolQ/ExbB proton channel family IOD66_10060 PF02472 Biopolymer transport protein ExbD/TolR IOD66_10065 PF17483 C-lobe handle domain of Tf-binding protein B IOD66_10065 PF17484 N-Lobe handle Tf-binding protein B IOD66_10065 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B IOD66_10070 PF07715 TonB-dependent Receptor Plug Domain IOD66_10070 PF00593 TonB dependent receptor IOD66_10085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IOD66_10085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IOD66_10090 PF00258 Flavodoxin IOD66_10100 PF03841 L-seryl-tRNA selenium transferase IOD66_10105 PF09107 Elongation factor SelB, winged helix IOD66_10105 PF00009 Elongation factor Tu GTP binding domain IOD66_10105 PF03144 Elongation factor Tu domain 2 IOD66_10105 PF09106 Elongation factor SelB, winged helix IOD66_10110 PF01029 NusB family IOD66_10110 PF01189 16S rRNA methyltransferase RsmB/F IOD66_10115 PF02254 TrkA-N domain IOD66_10115 PF02080 TrkA-C domain IOD66_10120 PF01649 Ribosomal protein S20 IOD66_10125 PF03023 Lipid II flippase MurJ IOD66_10135 PF00202 Aminotransferase class-III IOD66_10140 PF00953 Glycosyl transferase family 4 IOD66_10150 PF02350 UDP-N-acetylglucosamine 2-epimerase IOD66_10155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IOD66_10155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IOD66_10155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IOD66_10165 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IOD66_10170 PF01943 Polysaccharide biosynthesis protein IOD66_10175 PF00970 Oxidoreductase FAD-binding domain IOD66_10175 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD66_10175 PF00175 Oxidoreductase NAD-binding domain IOD66_10180 PF03063 Prismane/CO dehydrogenase family IOD66_10185 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 IOD66_10190 PF06899 WzyE protein, O-antigen assembly polymerase IOD66_10195 PF03808 Glycosyl transferase WecB/TagA/CpsF family IOD66_10235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IOD66_10235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IOD66_10240 PF00667 FAD binding domain IOD66_10240 PF00258 Flavodoxin IOD66_10240 PF00175 Oxidoreductase NAD-binding domain IOD66_10255 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_10260 PF00528 Binding-protein-dependent transport system inner membrane component IOD66_10265 PF12857 TOBE-like domain IOD66_10265 PF17850 CysA C-terminal regulatory domain IOD66_10265 PF00005 ABC transporter IOD66_10270 PF01070 FMN-dependent dehydrogenase IOD66_10275 PF03099 Biotin/lipoate A/B protein ligase family IOD66_10275 PF08279 HTH domain IOD66_10275 PF02237 Biotin protein ligase C terminal domain IOD66_10280 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IOD66_10280 PF01565 FAD binding domain IOD66_10285 PF00691 OmpA family IOD66_10285 PF01389 OmpA-like transmembrane domain IOD66_10290 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IOD66_10290 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IOD66_10295 PF04403 Paraquat-inducible protein A IOD66_10300 PF01841 Transglutaminase-like superfamily IOD66_10310 PF00403 Heavy-metal-associated domain IOD66_10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD66_10320 PF03466 LysR substrate binding domain IOD66_10325 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IOD66_10325 PF00132 Bacterial transferase hexapeptide (six repeats) IOD66_10325 PF14602 Hexapeptide repeat of succinyl-transferase IOD66_10330 PF01220 Dehydroquinase class II IOD66_10335 PF04488 Glycosyltransferase sugar-binding region containing DXD motif IOD66_10340 PF00364 Biotin-requiring enzyme IOD66_10345 PF02785 Biotin carboxylase C-terminal domain IOD66_10345 PF00289 Biotin carboxylase, N-terminal domain IOD66_10345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IOD66_10350 PF12804 MobA-like NTP transferase domain IOD66_10355 PF06288 Protein of unknown function (DUF1040) IOD66_10360 PF01323 DSBA-like thioredoxin domain IOD66_10370 PF05036 Sporulation related domain IOD66_10370 PF05036 Sporulation related domain IOD66_10375 PF04445 Putative SAM-dependent methyltransferase IOD66_10380 PF02557 D-alanyl-D-alanine carboxypeptidase IOD66_10385 PF07687 Peptidase dimerisation domain IOD66_10385 PF01546 Peptidase family M20/M25/M40 IOD66_10390 PF03960 ArsC family IOD66_10400 PF00809 Pterin binding enzyme IOD66_10405 PF00849 RNA pseudouridylate synthase IOD66_10405 PF01479 S4 domain IOD66_10415 PF00924 Mechanosensitive ion channel IOD66_10415 PF05552 Conserved TM helix IOD66_10420 PF02785 Biotin carboxylase C-terminal domain IOD66_10420 PF00289 Biotin carboxylase, N-terminal domain IOD66_10420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IOD66_10430 PF00675 Insulinase (Peptidase family M16) IOD66_10430 PF05193 Peptidase M16 inactive domain IOD66_10430 PF16187 Middle or third domain of peptidase_M16 IOD66_10435 PF17946 RecC C-terminal domain IOD66_10460 PF07977 FabA-like domain IOD66_10470 PF06303 MatP N-terminal domain IOD66_10470 PF17414 MatP C-terminal ribbon-helix-helix domain IOD66_10475 PF00579 tRNA synthetases class I (W and Y) IOD66_10480 PF13419 Haloacid dehalogenase-like hydrolase IOD66_10490 PF01790 Prolipoprotein diacylglyceryl transferase IOD66_10495 PF01925 Sulfite exporter TauE/SafE IOD66_10500 PF00293 NUDIX domain IOD66_10510 PF00719 Inorganic pyrophosphatase IOD66_10515 PF05175 Methyltransferase small domain IOD66_10520 PF03737 Aldolase/RraA IOD66_10525 PF01226 Formate/nitrite transporter IOD66_10540 PF00684 DnaJ central domain IOD66_10540 PF00226 DnaJ domain IOD66_10540 PF01556 DnaJ C terminal domain IOD66_10545 PF00012 Hsp70 protein IOD66_10550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IOD66_10550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IOD66_10560 PF13407 Periplasmic binding protein domain IOD66_10565 PF00005 ABC transporter IOD66_10570 PF02653 Branched-chain amino acid transport system / permease component IOD66_10575 PF12833 Helix-turn-helix domain IOD66_10580 PF01431 Peptidase family M13 IOD66_10580 PF05649 Peptidase family M13 IOD66_10585 PF10571 Uncharacterised protein family UPF0547 IOD66_10590 PF00474 Sodium:solute symporter family IOD66_10595 PF06196 Protein of unknown function (DUF997) IOD66_10600 PF01340 Met Apo-repressor, MetJ IOD66_10605 PF04333 MlaA lipoprotein IOD66_10610 PF01263 Aldose 1-epimerase IOD66_10625 PF14883 Hypothetical glycosyl hydrolase family 13 IOD66_10625 PF01522 Polysaccharide deacetylase IOD66_10640 PF00121 Triosephosphate isomerase IOD66_10645 PF01142 tRNA pseudouridine synthase D (TruD) IOD66_10650 PF01975 Survival protein SurE IOD66_10655 PF09335 SNARE associated Golgi protein IOD66_10670 PF01476 LysM domain IOD66_10670 PF01551 Peptidase family M23 IOD66_10675 PF03352 Methyladenine glycosylase IOD66_10685 PF07670 Nucleoside recognition IOD66_10695 PF00762 Ferrochelatase IOD66_10700 PF00468 Ribosomal protein L34 IOD66_10705 PF00825 Ribonuclease P IOD66_10710 PF01809 Putative membrane protein insertion efficiency factor IOD66_10715 PF00120 Glutamine synthetase, catalytic domain IOD66_10715 PF03951 Glutamine synthetase, beta-Grasp domain IOD66_10720 PF00149 Calcineurin-like phosphoesterase IOD66_10725 PF00293 NUDIX domain IOD66_10730 PF06146 Phosphate-starvation-inducible E IOD66_10735 PF01648 4'-phosphopantetheinyl transferase superfamily IOD66_10740 PF00892 EamA-like transporter family IOD66_10745 PF06965 Na+/H+ antiporter 1 IOD66_10755 PF02580 D-Tyr-tRNA(Tyr) deacylase IOD66_10760 PF03631 Virulence factor BrkB IOD66_10765 PF00171 Aldehyde dehydrogenase family IOD66_10770 PF07715 TonB-dependent Receptor Plug Domain IOD66_10770 PF00593 TonB dependent receptor IOD66_10775 PF07715 TonB-dependent Receptor Plug Domain IOD66_10775 PF00593 TonB dependent receptor IOD66_10785 PF04886 PT repeat IOD66_10785 PF00593 TonB dependent receptor IOD66_10785 PF07715 TonB-dependent Receptor Plug Domain IOD66_10800 PF01119 DNA mismatch repair protein, C-terminal domain IOD66_10800 PF08676 MutL C terminal dimerisation domain IOD66_10805 PF08240 Alcohol dehydrogenase GroES-like domain IOD66_10805 PF00107 Zinc-binding dehydrogenase IOD66_10815 PF17209 Hfq protein IOD66_10820 PF13167 GTP-binding GTPase N-terminal IOD66_10820 PF16360 GTP-binding GTPase Middle Region IOD66_10820 PF01926 50S ribosome-binding GTPase IOD66_10825 PF03641 Possible lysine decarboxylase IOD66_10830 PF03819 MazG nucleotide pyrophosphohydrolase domain IOD66_10835 PF00027 Cyclic nucleotide-binding domain IOD66_10835 PF13545 Crp-like helix-turn-helix domain IOD66_10840 PF06794 Uncharacterised protein family (UPF0270) IOD66_10845 PF00440 Bacterial regulatory proteins, tetR family IOD66_10850 PF00692 dUTPase IOD66_10855 PF02441 Flavoprotein IOD66_10855 PF04127 DNA / pantothenate metabolism flavoprotein IOD66_10860 PF04002 RadC-like JAB domain IOD66_10865 PF00830 Ribosomal L28 family IOD66_10870 PF00471 Ribosomal protein L33 IOD66_10880 PF00202 Aminotransferase class-III IOD66_10885 PF00282 Pyridoxal-dependent decarboxylase conserved domain IOD66_10890 PF01206 Sulfurtransferase TusA IOD66_10895 PF04143 Sulphur transport IOD66_10900 PF04219 Protein of unknown function, DUF IOD66_10905 PF05958 tRNA (Uracil-5-)-methyltransferase IOD66_10930 PF01544 CorA-like Mg2+ transporter protein IOD66_10935 PF01209 ubiE/COQ5 methyltransferase family IOD66_10945 PF03109 ABC1 family IOD66_10950 PF02416 mttA/Hcf106 family IOD66_10960 PF00902 Sec-independent protein translocase protein (TatC) IOD66_10965 PF00490 Delta-aminolevulinic acid dehydratase IOD66_10975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IOD66_10975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IOD66_10975 PF06827 Zinc finger found in FPG and IleRS IOD66_10980 PF05525 Branched-chain amino acid transport protein IOD66_10990 PF00698 Acyl transferase domain IOD66_10995 PF02677 Epoxyqueuosine reductase QueH IOD66_11000 PF00348 Polyprenyl synthetase IOD66_11010 PF03358 NADPH-dependent FMN reductase IOD66_11015 PF07681 DoxX IOD66_11020 PF00829 Ribosomal prokaryotic L21 protein IOD66_11025 PF01016 Ribosomal L27 protein IOD66_11030 PF00892 EamA-like transporter family IOD66_11035 PF04575 Protein of unknown function (DUF560) IOD66_11040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IOD66_11045 PF00156 Phosphoribosyl transferase domain IOD66_11050 PF05175 Methyltransferase small domain IOD66_11050 PF08468 Methyltransferase small domain N-terminal IOD66_11060 PF00583 Acetyltransferase (GNAT) family IOD66_11065 PF00270 DEAD/DEAH box helicase IOD66_11065 PF00271 Helicase conserved C-terminal domain IOD66_11070 PF01243 Pyridoxamine 5'-phosphate oxidase IOD66_11070 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IOD66_11075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD66_11080 PF00171 Aldehyde dehydrogenase family IOD66_11085 PF01184 GPR1/FUN34/yaaH family IOD66_11090 PF00005 ABC transporter IOD66_11095 PF01497 Periplasmic binding protein IOD66_11100 PF01032 FecCD transport family IOD66_11105 PF07715 TonB-dependent Receptor Plug Domain IOD66_11105 PF00593 TonB dependent receptor IOD66_11115 PF01259 SAICAR synthetase IOD66_11120 PF01634 ATP phosphoribosyltransferase IOD66_11120 PF08029 HisG, C-terminal domain IOD66_11125 PF00815 Histidinol dehydrogenase IOD66_11130 PF00155 Aminotransferase class I and II IOD66_11140 PF00475 Imidazoleglycerol-phosphate dehydratase IOD66_11155 PF00117 Glutamine amidotransferase class-I IOD66_11160 PF00977 Histidine biosynthesis protein IOD66_11165 PF00977 Histidine biosynthesis protein IOD66_11170 PF01502 Phosphoribosyl-AMP cyclohydrolase IOD66_11170 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IOD66_11175 PF02592 Putative vitamin uptake transporter IOD66_11180 PF00557 Metallopeptidase family M24 IOD66_11190 PF13407 Periplasmic binding protein domain IOD66_11190 PF00356 Bacterial regulatory proteins, lacI family IOD66_11195 PF08244 Glycosyl hydrolases family 32 C terminal IOD66_11195 PF00251 Glycosyl hydrolases family 32 N-terminal domain IOD66_11200 PF00294 pfkB family carbohydrate kinase IOD66_11205 PF07732 Multicopper oxidase IOD66_11210 PF02687 FtsX-like permease family IOD66_11210 PF12704 MacB-like periplasmic core domain IOD66_11215 PF00005 ABC transporter IOD66_11220 PF02687 FtsX-like permease family IOD66_11220 PF12704 MacB-like periplasmic core domain IOD66_11225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IOD66_11225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IOD66_11230 PF00793 DAHP synthetase I family IOD66_11235 PF13369 Transglutaminase-like superfamily IOD66_11240 PF13847 Methyltransferase domain IOD66_11240 PF17827 PrmC N-terminal domain IOD66_11250 PF03462 PCRF domain IOD66_11250 PF00472 RF-1 domain IOD66_11255 PF00581 Rhodanese-like domain IOD66_11260 PF04143 Sulphur transport