locus-tag class description CHY23_00002 PF10609 NUBPL iron-transfer P-loop NTPase CHY23_00004 PF01914 MarC family integral membrane protein CHY23_00005 PF13145 PPIC-type PPIASE domain CHY23_00006 PF00999 Sodium/hydrogen exchanger family CHY23_00007 PF00312 Ribosomal protein S15 CHY23_00008 PF05661 Protein of unknown function (DUF808) CHY23_00009 PF07219 HemY protein N-terminus CHY23_00010 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CHY23_00011 PF02602 Uroporphyrinogen-III synthase HemD CHY23_00012 PF03900 Porphobilinogen deaminase, C-terminal domain CHY23_00012 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CHY23_00013 PF00465 Iron-containing alcohol dehydrogenase CHY23_00013 PF00171 Aldehyde dehydrogenase family CHY23_00014 PF00118 TCP-1/cpn60 chaperonin family CHY23_00015 PF00166 Chaperonin 10 Kd subunit CHY23_00016 PF01048 Phosphorylase superfamily CHY23_00017 PF01791 DeoC/LacD family aldolase CHY23_00018 PF01773 Na+ dependent nucleoside transporter N-terminus CHY23_00018 PF07670 Nucleoside recognition CHY23_00018 PF07662 Na+ dependent nucleoside transporter C-terminus CHY23_00020 PF01081 KDPG and KHG aldolase CHY23_00021 PF00294 pfkB family carbohydrate kinase CHY23_00022 PF02614 Glucuronate isomerase CHY23_00023 PF17137 Domain of unknown function (DUF5110) CHY23_00023 PF16338 Domain of unknown function (DUF4968) CHY23_00023 PF01055 Glycosyl hydrolases family 31 CHY23_00023 PF13802 Galactose mutarotase-like CHY23_00025 PF00392 Bacterial regulatory proteins, gntR family CHY23_00025 PF07729 FCD domain CHY23_00027 PF01641 SelR domain CHY23_00027 PF01625 Peptide methionine sulfoxide reductase CHY23_00028 PF00535 Glycosyl transferase family 2 CHY23_00029 PF00535 Glycosyl transferase family 2 CHY23_00031 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CHY23_00033 PF04230 Polysaccharide pyruvyl transferase CHY23_00034 PF02698 DUF218 domain CHY23_00035 PF17764 3′ DNA-binding domain (3′BD) CHY23_00035 PF18074 Primosomal protein N C-terminal domain CHY23_00035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CHY23_00035 PF00270 DEAD/DEAH box helicase CHY23_00035 PF00271 Helicase conserved C-terminal domain CHY23_00036 PF00800 Prephenate dehydratase CHY23_00036 PF01817 Chorismate mutase type II CHY23_00037 PF01432 Peptidase family M3 CHY23_00038 PF04055 Radical SAM superfamily CHY23_00039 PF01228 Glycine radical CHY23_00039 PF02901 Pyruvate formate lyase-like CHY23_00040 PF01226 Formate/nitrite transporter CHY23_00042 PF01435 Peptidase family M48 CHY23_00043 PF00817 impB/mucB/samB family CHY23_00043 PF11799 impB/mucB/samB family C-terminal domain CHY23_00043 PF11798 IMS family HHH motif CHY23_00044 PF03956 Lysine exporter LysO CHY23_00045 PF00425 chorismate binding enzyme CHY23_00046 PF00155 Aminotransferase class I and II CHY23_00047 PF00892 EamA-like transporter family CHY23_00048 PF00892 EamA-like transporter family CHY23_00049 PF01810 LysE type translocator CHY23_00051 PF07715 TonB-dependent Receptor Plug Domain CHY23_00051 PF00593 TonB dependent receptor CHY23_00051 PF04886 PT repeat CHY23_00052 PF01243 Pyridoxamine 5'-phosphate oxidase CHY23_00054 PF03918 Cytochrome C biogenesis protein CHY23_00055 PF08534 Redoxin CHY23_00056 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CHY23_00056 PF01578 Cytochrome C assembly protein CHY23_00057 PF00999 Sodium/hydrogen exchanger family CHY23_00057 PF02254 TrkA-N domain CHY23_00058 PF01295 Adenylate cyclase, class-I CHY23_00058 PF12633 Adenylate cyclase NT domain CHY23_00059 PF02801 Beta-ketoacyl synthase, C-terminal domain CHY23_00059 PF00109 Beta-ketoacyl synthase, N-terminal domain CHY23_00061 PF13333 Integrase core domain CHY23_00061 PF00665 Integrase core domain CHY23_00063 PF04076 Bacterial OB fold (BOF) protein CHY23_00066 PF00072 Response regulator receiver domain CHY23_00066 PF00486 Transcriptional regulatory protein, C terminal CHY23_00067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_00067 PF00512 His Kinase A (phospho-acceptor) domain CHY23_00067 PF08521 Two-component sensor kinase N-terminal CHY23_00068 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CHY23_00069 PF02699 Preprotein translocase subunit CHY23_00070 PF02355 Protein export membrane protein CHY23_00070 PF13721 SecD export protein N-terminal TM region CHY23_00070 PF07549 SecD/SecF GG Motif CHY23_00071 PF07549 SecD/SecF GG Motif CHY23_00071 PF02355 Protein export membrane protein CHY23_00072 PF00210 Ferritin-like domain CHY23_00073 PF00210 Ferritin-like domain CHY23_00074 PF00860 Permease family CHY23_00075 PF02545 Maf-like protein CHY23_00077 PF03466 LysR substrate binding domain CHY23_00077 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00080 PF13173 AAA domain CHY23_00080 PF13635 Domain of unknown function (DUF4143) CHY23_00083 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHY23_00084 PF02926 THUMP domain CHY23_00084 PF02568 Thiamine biosynthesis protein (ThiI) CHY23_00085 PF00709 Adenylosuccinate synthetase CHY23_00086 PF01145 SPFH domain / Band 7 family CHY23_00087 PF01145 SPFH domain / Band 7 family CHY23_00088 PF00085 Thioredoxin CHY23_00089 PF00860 Permease family CHY23_00090 PF02773 S-adenosylmethionine synthetase, C-terminal domain CHY23_00090 PF00438 S-adenosylmethionine synthetase, N-terminal domain CHY23_00090 PF02772 S-adenosylmethionine synthetase, central domain CHY23_00092 PF13520 Amino acid permease CHY23_00093 PF13520 Amino acid permease CHY23_00095 PF07687 Peptidase dimerisation domain CHY23_00095 PF01546 Peptidase family M20/M25/M40 CHY23_00096 PF03922 OmpW family CHY23_00097 PF17871 AAA lid domain CHY23_00097 PF00004 ATPase family associated with various cellular activities (AAA) CHY23_00097 PF10431 C-terminal, D2-small domain, of ClpB protein CHY23_00097 PF02861 Clp amino terminal domain, pathogenicity island component CHY23_00097 PF07724 AAA domain (Cdc48 subfamily) CHY23_00098 PF01758 Sodium Bile acid symporter family CHY23_00099 PF03960 ArsC family CHY23_00101 PF00206 Lyase CHY23_00101 PF10415 Fumarase C C-terminus CHY23_00103 PF00586 AIR synthase related protein, N-terminal domain CHY23_00103 PF02769 AIR synthase related protein, C-terminal domain CHY23_00104 PF00728 Glycosyl hydrolase family 20, catalytic domain CHY23_00104 PF00746 LPXTG cell wall anchor motif CHY23_00104 PF04650 YSIRK type signal peptide CHY23_00104 PF07501 G5 domain CHY23_00105 PF06508 Queuosine biosynthesis protein QueC CHY23_00106 PF01242 6-pyruvoyl tetrahydropterin synthase CHY23_00107 PF04055 Radical SAM superfamily CHY23_00110 PF02789 Cytosol aminopeptidase family, N-terminal domain CHY23_00110 PF00883 Cytosol aminopeptidase family, catalytic domain CHY23_00112 PF03739 Lipopolysaccharide export system permease LptF/LptG CHY23_00113 PF03739 Lipopolysaccharide export system permease LptF/LptG CHY23_00114 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHY23_00114 PF01336 OB-fold nucleic acid binding domain CHY23_00114 PF02811 PHP domain CHY23_00114 PF14579 Helix-hairpin-helix motif CHY23_00114 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHY23_00115 PF01370 NAD dependent epimerase/dehydratase family CHY23_00115 PF02222 ATP-grasp domain CHY23_00116 PF01553 Acyltransferase CHY23_00117 PF00717 Peptidase S24-like CHY23_00117 PF01726 LexA DNA binding domain CHY23_00118 PF02976 DNA mismatch repair enzyme MutH CHY23_00119 PF03741 Integral membrane protein TerC family CHY23_00120 PF00933 Glycosyl hydrolase family 3 N terminal domain CHY23_00121 PF05958 tRNA (Uracil-5-)-methyltransferase CHY23_00122 PF00113 Enolase, C-terminal TIM barrel domain CHY23_00122 PF03952 Enolase, N-terminal domain CHY23_00123 PF00293 NUDIX domain CHY23_00124 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) CHY23_00125 PF00570 HRDC domain CHY23_00125 PF00271 Helicase conserved C-terminal domain CHY23_00125 PF00270 DEAD/DEAH box helicase CHY23_00125 PF09382 RQC domain CHY23_00125 PF16124 RecQ zinc-binding CHY23_00126 PF01491 Frataxin-like domain CHY23_00127 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CHY23_00128 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CHY23_00129 PF00814 Glycoprotease family CHY23_00130 PF13525 Outer membrane lipoprotein CHY23_00131 PF01479 S4 domain CHY23_00131 PF00849 RNA pseudouridylate synthase CHY23_00132 PF14256 YwiC-like protein CHY23_00133 PF00365 Phosphofructokinase CHY23_00134 PF00266 Aminotransferase class-V CHY23_00135 PF00565 Staphylococcal nuclease homologue CHY23_00136 PF01235 Sodium:alanine symporter family CHY23_00137 PF01594 AI-2E family transporter CHY23_00140 PF04932 O-Antigen ligase CHY23_00141 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CHY23_00141 PF00534 Glycosyl transferases group 1 CHY23_00142 PF01467 Cytidylyltransferase-like CHY23_00143 PF00929 Exonuclease CHY23_00144 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CHY23_00145 PF01476 LysM domain CHY23_00145 PF01520 N-acetylmuramoyl-L-alanine amidase CHY23_00146 PF00342 Phosphoglucose isomerase CHY23_00147 PF04380 Membrane fusogenic activity CHY23_00152 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CHY23_00152 PF01488 Shikimate / quinate 5-dehydrogenase CHY23_00152 PF08501 Shikimate dehydrogenase substrate binding domain CHY23_00153 PF01300 Telomere recombination CHY23_00154 PF01396 Topoisomerase DNA binding C4 zinc finger CHY23_00156 PF02631 RecX family CHY23_00157 PF00154 recA bacterial DNA recombination protein CHY23_00158 PF01063 Amino-transferase class IV CHY23_00159 PF00425 chorismate binding enzyme CHY23_00160 PF02646 RmuC family CHY23_00161 PF00117 Glutamine amidotransferase class-I CHY23_00162 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CHY23_00162 PF03625 Domain of unknown function DUF302 CHY23_00163 PF00152 tRNA synthetases class II (D, K and N) CHY23_00163 PF02938 GAD domain CHY23_00163 PF01336 OB-fold nucleic acid binding domain CHY23_00164 PF00293 NUDIX domain CHY23_00165 PF01709 Transcriptional regulator CHY23_00167 PF02075 Crossover junction endodeoxyribonuclease RuvC CHY23_00168 PF05193 Peptidase M16 inactive domain CHY23_00168 PF00675 Insulinase (Peptidase family M16) CHY23_00169 PF08267 Cobalamin-independent synthase, N-terminal domain CHY23_00169 PF01717 Cobalamin-independent synthase, Catalytic domain CHY23_00170 PF00939 Sodium:sulfate symporter transmembrane region CHY23_00171 PF03466 LysR substrate binding domain CHY23_00171 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00172 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B CHY23_00174 PF00849 RNA pseudouridylate synthase CHY23_00174 PF01479 S4 domain CHY23_00175 PF01300 Telomere recombination CHY23_00178 PF04261 Dyp-type peroxidase family CHY23_00179 PF00425 chorismate binding enzyme CHY23_00179 PF04715 Anthranilate synthase component I, N terminal region CHY23_00180 PF00117 Glutamine amidotransferase class-I CHY23_00181 PF00591 Glycosyl transferase family, a/b domain CHY23_00181 PF02885 Glycosyl transferase family, helical bundle domain CHY23_00182 PF08241 Methyltransferase domain CHY23_00183 PF16036 Chalcone isomerase-like CHY23_00184 PF04325 Protein of unknown function (DUF465) CHY23_00185 PF01281 Ribosomal protein L9, N-terminal domain CHY23_00185 PF03948 Ribosomal protein L9, C-terminal domain CHY23_00186 PF01084 Ribosomal protein S18 CHY23_00187 PF01250 Ribosomal protein S6 CHY23_00188 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CHY23_00188 PF02844 Phosphoribosylglycinamide synthetase, N domain CHY23_00188 PF02843 Phosphoribosylglycinamide synthetase, C domain CHY23_00189 PF04973 Nicotinamide mononucleotide transporter CHY23_00190 PF09976 Tetratricopeptide repeat-like domain CHY23_00191 PF03129 Anticodon binding domain CHY23_00191 PF13393 Histidyl-tRNA synthetase CHY23_00192 PF04551 GcpE protein CHY23_00193 PF13464 Domain of unknown function (DUF4115) CHY23_00194 PF00916 Sulfate permease family CHY23_00194 PF01740 STAS domain CHY23_00195 PF00206 Lyase CHY23_00195 PF14698 Argininosuccinate lyase C-terminal CHY23_00196 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CHY23_00196 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CHY23_00197 PF00999 Sodium/hydrogen exchanger family CHY23_00197 PF02254 TrkA-N domain CHY23_00200 PF03466 LysR substrate binding domain CHY23_00200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00206 PF02566 OsmC-like protein CHY23_00210 PF03328 HpcH/HpaI aldolase/citrate lyase family CHY23_00212 PF06719 AraC-type transcriptional regulator N-terminus CHY23_00212 PF12833 Helix-turn-helix domain CHY23_00213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00213 PF03466 LysR substrate binding domain CHY23_00214 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHY23_00215 PF00296 Luciferase-like monooxygenase CHY23_00216 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CHY23_00216 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CHY23_00217 PF00881 Nitroreductase family CHY23_00218 PF01914 MarC family integral membrane protein CHY23_00220 PF00756 Putative esterase CHY23_00221 PF02798 Glutathione S-transferase, N-terminal domain CHY23_00224 PF00107 Zinc-binding dehydrogenase CHY23_00224 PF08240 Alcohol dehydrogenase GroES-like domain CHY23_00225 PF02028 BCCT, betaine/carnitine/choline family transporter CHY23_00228 PF03595 Voltage-dependent anion channel CHY23_00229 PF13419 Haloacid dehalogenase-like hydrolase CHY23_00232 PF00005 ABC transporter CHY23_00232 PF00664 ABC transporter transmembrane region CHY23_00233 PF02664 S-Ribosylhomocysteinase (LuxS) CHY23_00234 PF02470 MlaD protein CHY23_00235 PF01475 Ferric uptake regulator family CHY23_00236 PF00258 Flavodoxin CHY23_00237 PF01402 Ribbon-helix-helix protein, copG family CHY23_00238 PF04073 Aminoacyl-tRNA editing domain CHY23_00240 PF00860 Permease family CHY23_00241 PF02635 DsrE/DsrF-like family CHY23_00243 PF01176 Translation initiation factor 1A / IF-1 CHY23_00244 PF10144 Bacterial virulence factor haemolysin CHY23_00245 PF18429 Domain of unknown function (DUF5609) CHY23_00246 PF04461 Protein of unknown function (DUF520) CHY23_00248 PF00343 Carbohydrate phosphorylase CHY23_00249 PF00196 Bacterial regulatory proteins, luxR family CHY23_00249 PF17874 MalT-like TPR region CHY23_00250 PF07148 Maltose operon periplasmic protein precursor (MalM) CHY23_00251 PF02264 LamB porin CHY23_00252 PF00005 ABC transporter CHY23_00252 PF17912 MalK OB fold domain CHY23_00253 PF01547 Bacterial extracellular solute-binding protein CHY23_00254 PF14785 Maltose transport system permease protein MalF P2 domain CHY23_00254 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00255 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00256 PF02446 4-alpha-glucanotransferase CHY23_00257 PF02554 Carbon starvation protein CstA CHY23_00258 PF01026 TatD related DNase CHY23_00259 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHY23_00259 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHY23_00260 PF03350 Uncharacterized protein family, UPF0114 CHY23_00261 PF00881 Nitroreductase family CHY23_00264 PF00005 ABC transporter CHY23_00265 PF01116 Fructose-bisphosphate aldolase class-II CHY23_00266 PF00162 Phosphoglycerate kinase CHY23_00267 PF00939 Sodium:sulfate symporter transmembrane region CHY23_00268 PF00939 Sodium:sulfate symporter transmembrane region CHY23_00269 PF00939 Sodium:sulfate symporter transmembrane region CHY23_00270 PF01751 Toprim domain CHY23_00270 PF00204 DNA gyrase B CHY23_00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_00270 PF00986 DNA gyrase B subunit, carboxyl terminus CHY23_00271 PF00512 His Kinase A (phospho-acceptor) domain CHY23_00271 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_00272 PF00486 Transcriptional regulatory protein, C terminal CHY23_00272 PF00072 Response regulator receiver domain CHY23_00273 PF00005 ABC transporter CHY23_00274 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00275 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00276 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00277 PF12849 PBP superfamily domain CHY23_00278 PF00376 MerR family regulatory protein CHY23_00278 PF09278 MerR, DNA binding CHY23_00280 PF00403 Heavy-metal-associated domain CHY23_00281 PF00403 Heavy-metal-associated domain CHY23_00282 PF00106 short chain dehydrogenase CHY23_00283 PF00881 Nitroreductase family CHY23_00284 PF01343 Peptidase family S49 CHY23_00285 PF00445 Ribonuclease T2 family CHY23_00286 PF10263 SprT-like family CHY23_00286 PF17283 SprT-like zinc ribbon domain CHY23_00287 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHY23_00288 PF17674 HHH domain CHY23_00288 PF09371 Tex-like protein N-terminal domain CHY23_00288 PF16921 Tex protein YqgF-like domain CHY23_00288 PF00575 S1 RNA binding domain CHY23_00290 PF04055 Radical SAM superfamily CHY23_00295 PF00749 tRNA synthetases class I (E and Q), catalytic domain CHY23_00297 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CHY23_00298 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CHY23_00299 PF03966 Trm112p-like protein CHY23_00300 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CHY23_00301 PF07724 AAA domain (Cdc48 subfamily) CHY23_00301 PF10431 C-terminal, D2-small domain, of ClpB protein CHY23_00301 PF06689 ClpX C4-type zinc finger CHY23_00302 PF00574 Clp protease CHY23_00303 PF02657 Fe-S metabolism associated domain CHY23_00306 PF00929 Exonuclease CHY23_00307 PF00005 ABC transporter CHY23_00307 PF12848 ABC transporter CHY23_00308 PF02627 Carboxymuconolactone decarboxylase family CHY23_00311 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CHY23_00312 PF01722 BolA-like protein CHY23_00314 PF05494 MlaC protein CHY23_00315 PF02470 MlaD protein CHY23_00316 PF02405 Permease MlaE CHY23_00317 PF00005 ABC transporter CHY23_00318 PF00595 PDZ domain CHY23_00319 PF08338 Domain of unknown function (DUF1731) CHY23_00319 PF01370 NAD dependent epimerase/dehydratase family CHY23_00320 PF02863 Arginine repressor, C-terminal domain CHY23_00320 PF01316 Arginine repressor, DNA binding domain CHY23_00321 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CHY23_00321 PF00056 lactate/malate dehydrogenase, NAD binding domain CHY23_00323 PF05191 Adenylate kinase, active site lid CHY23_00325 PF07690 Major Facilitator Superfamily CHY23_00326 PF01370 NAD dependent epimerase/dehydratase family CHY23_00327 PF00533 BRCA1 C Terminus (BRCT) domain CHY23_00327 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CHY23_00327 PF12826 Helix-hairpin-helix motif CHY23_00327 PF01653 NAD-dependent DNA ligase adenylation domain CHY23_00327 PF03120 NAD-dependent DNA ligase OB-fold domain CHY23_00328 PF04354 ZipA, C-terminal FtsZ-binding domain CHY23_00331 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CHY23_00331 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CHY23_00333 PF06250 YhcG PDDEXK nuclease domain CHY23_00333 PF17761 DUF1016 N-terminal domain CHY23_00335 PF07690 Major Facilitator Superfamily CHY23_00336 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CHY23_00337 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CHY23_00337 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CHY23_00338 PF00459 Inositol monophosphatase family CHY23_00339 PF00293 NUDIX domain CHY23_00340 PF01479 S4 domain CHY23_00341 PF01430 Hsp33 protein CHY23_00342 PF03605 Anaerobic c4-dicarboxylate membrane transporter CHY23_00344 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CHY23_00344 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CHY23_00345 PF00696 Amino acid kinase family CHY23_00346 PF00367 phosphotransferase system, EIIB CHY23_00346 PF02378 Phosphotransferase system, EIIC CHY23_00347 PF00005 ABC transporter CHY23_00348 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00349 PF00381 PTS HPr component phosphorylation site CHY23_00350 PF02896 PEP-utilising enzyme, TIM barrel domain CHY23_00350 PF05524 PEP-utilising enzyme, N-terminal CHY23_00350 PF00391 PEP-utilising enzyme, mobile domain CHY23_00351 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CHY23_00352 PF00919 Uncharacterized protein family UPF0004 CHY23_00352 PF01938 TRAM domain CHY23_00352 PF04055 Radical SAM superfamily CHY23_00353 PF00580 UvrD/REP helicase N-terminal domain CHY23_00353 PF13361 UvrD-like helicase C-terminal domain CHY23_00354 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHY23_00355 PF01924 Hydrogenase formation hypA family CHY23_00356 PF00586 AIR synthase related protein, N-terminal domain CHY23_00356 PF02769 AIR synthase related protein, C-terminal domain CHY23_00357 PF07503 HypF finger CHY23_00357 PF17788 HypF Kae1-like domain CHY23_00357 PF00708 Acylphosphatase CHY23_00357 PF01300 Telomere recombination CHY23_00358 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CHY23_00358 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CHY23_00359 PF13247 4Fe-4S dicluster domain CHY23_00360 PF03916 Polysulphide reductase, NrfD CHY23_00361 PF00374 Nickel-dependent hydrogenase CHY23_00362 PF01750 Hydrogenase maturation protease CHY23_00363 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CHY23_00364 PF01455 HupF/HypC family CHY23_00365 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CHY23_00372 PF17757 UvrB interaction domain CHY23_00372 PF00271 Helicase conserved C-terminal domain CHY23_00372 PF03461 TRCF domain CHY23_00372 PF00270 DEAD/DEAH box helicase CHY23_00372 PF02559 CarD-like/TRCF domain CHY23_00373 PF11940 Domain of unknown function (DUF3458) Ig-like fold CHY23_00373 PF01433 Peptidase family M1 domain CHY23_00373 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CHY23_00374 PF02660 Glycerol-3-phosphate acyltransferase CHY23_00375 PF02152 Dihydroneopterin aldolase CHY23_00376 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CHY23_00376 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHY23_00377 PF18075 FtsX extracellular domain CHY23_00378 PF00005 ABC transporter CHY23_00379 PF00448 SRP54-type protein, GTPase domain CHY23_00379 PF02881 SRP54-type protein, helical bundle domain CHY23_00381 PF04269 Protein of unknown function, DUF440 CHY23_00382 PF01613 Flavin reductase like domain CHY23_00383 PF09313 Domain of unknown function (DUF1971) CHY23_00383 PF03848 Tellurite resistance protein TehB CHY23_00384 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00385 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00386 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHY23_00387 PF00005 ABC transporter CHY23_00388 PF01161 Phosphatidylethanolamine-binding protein CHY23_00389 PF01699 Sodium/calcium exchanger protein CHY23_00390 PF01381 Helix-turn-helix CHY23_00392 PF02683 Cytochrome C biogenesis protein transmembrane region CHY23_00392 PF13098 Thioredoxin-like domain CHY23_00392 PF11412 Disulphide bond corrector protein DsbC CHY23_00393 PF04315 Elongation factor P hydroxylase CHY23_00394 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHY23_00395 PF04348 LppC putative lipoprotein CHY23_00396 PF02021 Uncharacterised protein family UPF0102 CHY23_00397 PF13580 SIS domain CHY23_00398 PF04972 BON domain CHY23_00400 PF01464 Transglycosylase SLT domain CHY23_00400 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHY23_00404 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CHY23_00404 PF01578 Cytochrome C assembly protein CHY23_00405 PF03100 CcmE CHY23_00406 PF04995 Heme exporter protein D (CcmD) CHY23_00407 PF01578 Cytochrome C assembly protein CHY23_00408 PF03379 CcmB protein CHY23_00409 PF00005 ABC transporter CHY23_00410 PF00308 Bacterial dnaA protein CHY23_00416 PF04277 Oxaloacetate decarboxylase, gamma chain CHY23_00417 PF00682 HMGL-like CHY23_00417 PF02436 Conserved carboxylase domain CHY23_00417 PF00364 Biotin-requiring enzyme CHY23_00418 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CHY23_00419 PF03831 PhnA domain CHY23_00419 PF08274 PhnA Zinc-Ribbon CHY23_00420 PF03150 Di-haem cytochrome c peroxidase CHY23_00420 PF00034 Cytochrome c CHY23_00420 PF14376 Haem-binding domain CHY23_00421 PF02594 Uncharacterised ACR, YggU family COG1872 CHY23_00422 PF02325 YGGT family CHY23_00423 PF04320 Protein with unknown function (DUF469) CHY23_00424 PF02390 Putative methyltransferase CHY23_00425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CHY23_00425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CHY23_00426 PF02504 Fatty acid synthesis protein CHY23_00427 PF01783 Ribosomal L32p protein family CHY23_00428 PF02620 Large ribosomal RNA subunit accumulation protein YceD CHY23_00429 PF01578 Cytochrome C assembly protein CHY23_00430 PF00571 CBS domain CHY23_00430 PF01595 Cyclin M transmembrane N-terminal domain CHY23_00430 PF03471 Transporter associated domain CHY23_00431 PF00209 Sodium:neurotransmitter symporter family CHY23_00433 PF03610 PTS system fructose IIA component CHY23_00433 PF03830 PTS system sorbose subfamily IIB component CHY23_00434 PF03609 PTS system sorbose-specific iic component CHY23_00435 PF03613 PTS system mannose/fructose/sorbose family IID component CHY23_00436 PF06173 Protein of unknown function (DUF986) CHY23_00437 PF01238 Phosphomannose isomerase type I CHY23_00440 PF00005 ABC transporter CHY23_00440 PF00664 ABC transporter transmembrane region CHY23_00440 PF03412 Peptidase C39 family CHY23_00441 PF08339 RTX C-terminal domain CHY23_00441 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CHY23_00441 PF02382 N-terminal domain in RTX protein CHY23_00442 PF02794 RTX toxin acyltransferase family CHY23_00444 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00445 PF08402 TOBE domain CHY23_00445 PF00005 ABC transporter CHY23_00446 PF08245 Mur ligase middle domain CHY23_00446 PF02875 Mur ligase family, glutamate ligase domain CHY23_00446 PF01225 Mur ligase family, catalytic domain CHY23_00447 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CHY23_00449 PF08534 Redoxin CHY23_00449 PF00462 Glutaredoxin CHY23_00450 PF03466 LysR substrate binding domain CHY23_00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00451 PF00440 Bacterial regulatory proteins, tetR family CHY23_00452 PF00578 AhpC/TSA family CHY23_00453 PF00575 S1 RNA binding domain CHY23_00453 PF00773 RNB domain CHY23_00453 PF08206 Ribonuclease B OB domain CHY23_00453 PF08461 Ribonuclease R winged-helix domain CHY23_00453 PF17876 Cold shock domain CHY23_00455 PF01479 S4 domain CHY23_00455 PF00579 tRNA synthetases class I (W and Y) CHY23_00456 PF04545 Sigma-70, region 4 CHY23_00456 PF04539 Sigma-70 region 3 CHY23_00456 PF04546 Sigma-70, non-essential region CHY23_00456 PF04542 Sigma-70 region 2 CHY23_00456 PF00140 Sigma-70 factor, region 1.2 CHY23_00456 PF03979 Sigma-70 factor, region 1.1 CHY23_00457 PF08275 DNA primase catalytic core, N-terminal domain CHY23_00457 PF08278 DNA primase DnaG DnaB-binding CHY23_00457 PF01807 CHC2 zinc finger CHY23_00457 PF10410 DnaB-helicase binding domain of primase CHY23_00458 PF01165 Ribosomal protein S21 CHY23_00459 PF02397 Bacterial sugar transferase CHY23_00460 PF00535 Glycosyl transferase family 2 CHY23_00461 PF00535 Glycosyl transferase family 2 CHY23_00466 PF00005 ABC transporter CHY23_00467 PF01061 ABC-2 type transporter CHY23_00468 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CHY23_00469 PF04321 RmlD substrate binding domain CHY23_00470 PF00483 Nucleotidyl transferase CHY23_00471 PF16363 GDP-mannose 4,6 dehydratase CHY23_00472 PF01521 Iron-sulphur cluster biosynthesis CHY23_00473 PF01040 UbiA prenyltransferase family CHY23_00474 PF01980 tRNA-methyltransferase O CHY23_00474 PF18389 TrmO C-terminal domain CHY23_00476 PF00230 Major intrinsic protein CHY23_00478 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CHY23_00479 PF00291 Pyridoxal-phosphate dependent enzyme CHY23_00479 PF00585 C-terminal regulatory domain of Threonine dehydratase CHY23_00480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHY23_00480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHY23_00480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHY23_00480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHY23_00481 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CHY23_00482 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHY23_00482 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHY23_00484 PF01297 Zinc-uptake complex component A periplasmic CHY23_00485 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CHY23_00486 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CHY23_00488 PF00575 S1 RNA binding domain CHY23_00488 PF10150 Ribonuclease E/G family CHY23_00488 PF12111 Polyribonucleotide phosphorylase C terminal CHY23_00491 PF13333 Integrase core domain CHY23_00491 PF00665 Integrase core domain CHY23_00492 PF02525 Flavodoxin-like fold CHY23_00493 PF12838 4Fe-4S dicluster domain CHY23_00493 PF13187 4Fe-4S dicluster domain CHY23_00495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHY23_00495 PF10518 TAT (twin-arginine translocation) pathway signal sequence CHY23_00495 PF01568 Molydopterin dinucleotide binding domain CHY23_00495 PF00384 Molybdopterin oxidoreductase CHY23_00496 PF12800 4Fe-4S binding domain CHY23_00496 PF12838 4Fe-4S dicluster domain CHY23_00497 PF12801 4Fe-4S binding domain CHY23_00497 PF12837 4Fe-4S binding domain CHY23_00498 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CHY23_00499 PF03264 NapC/NirT cytochrome c family, N-terminal region CHY23_00500 PF14849 YidC periplasmic domain CHY23_00500 PF02096 60Kd inner membrane protein CHY23_00501 PF03061 Thioesterase superfamily CHY23_00502 PF02913 FAD linked oxidases, C-terminal domain CHY23_00502 PF13183 4Fe-4S dicluster domain CHY23_00502 PF01565 FAD binding domain CHY23_00503 PF00691 OmpA family CHY23_00503 PF01389 OmpA-like transmembrane domain CHY23_00504 PF13407 Periplasmic binding protein domain CHY23_00505 PF00005 ABC transporter CHY23_00506 PF02653 Branched-chain amino acid transport system / permease component CHY23_00510 PF06039 Malate:quinone oxidoreductase (Mqo) CHY23_00511 PF00501 AMP-binding enzyme CHY23_00512 PF00248 Aldo/keto reductase family CHY23_00513 PF04175 Protein of unknown function (DUF406) CHY23_00514 PF03222 Tryptophan/tyrosine permease family CHY23_00516 PF04262 Glutamate-cysteine ligase CHY23_00516 PF18419 ATP-grasp-like domain CHY23_00516 PF02655 ATP-grasp domain CHY23_00517 PF01420 Type I restriction modification DNA specificity domain CHY23_00518 PF00589 Phage integrase family CHY23_00518 PF02899 Phage integrase, N-terminal SAM-like domain CHY23_00519 PF01420 Type I restriction modification DNA specificity domain CHY23_00521 PF02384 N-6 DNA Methylase CHY23_00521 PF12161 HsdM N-terminal domain CHY23_00522 PF00271 Helicase conserved C-terminal domain CHY23_00522 PF08463 EcoEI R protein C-terminal CHY23_00522 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CHY23_00522 PF04851 Type III restriction enzyme, res subunit CHY23_00523 PF02666 Phosphatidylserine decarboxylase CHY23_00525 PF08525 Opacity-associated protein A N-terminal motif CHY23_00525 PF04225 Opacity-associated protein A LysM-like domain CHY23_00527 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CHY23_00528 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CHY23_00529 PF00164 Ribosomal protein S12/S23 CHY23_00530 PF00177 Ribosomal protein S7p/S5e CHY23_00531 PF00009 Elongation factor Tu GTP binding domain CHY23_00531 PF00679 Elongation factor G C-terminus CHY23_00531 PF03144 Elongation factor Tu domain 2 CHY23_00531 PF14492 Elongation Factor G, domain II CHY23_00531 PF03764 Elongation factor G, domain IV CHY23_00532 PF03143 Elongation factor Tu C-terminal domain CHY23_00532 PF03144 Elongation factor Tu domain 2 CHY23_00532 PF00009 Elongation factor Tu GTP binding domain CHY23_00535 PF08543 Phosphomethylpyrimidine kinase CHY23_00537 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CHY23_00538 PF07731 Multicopper oxidase CHY23_00538 PF07732 Multicopper oxidase CHY23_00539 PF01553 Acyltransferase CHY23_00540 PF08534 Redoxin CHY23_00541 PF01926 50S ribosome-binding GTPase CHY23_00541 PF10396 GTP-binding protein TrmE N-terminus CHY23_00541 PF12631 MnmE helical domain CHY23_00542 PF05167 Uncharacterised ACR (DUF711) CHY23_00544 PF02678 Pirin CHY23_00544 PF17954 Quercetinase C-terminal cupin domain CHY23_00545 PF00210 Ferritin-like domain CHY23_00548 PF12805 FUSC-like inner membrane protein yccS CHY23_00549 PF02142 MGS-like domain CHY23_00550 PF14821 Threonine synthase N terminus CHY23_00550 PF00291 Pyridoxal-phosphate dependent enzyme CHY23_00552 PF00665 Integrase core domain CHY23_00552 PF13333 Integrase core domain CHY23_00553 PF10458 Valyl tRNA synthetase tRNA binding arm CHY23_00553 PF08264 Anticodon-binding domain of tRNA CHY23_00553 PF00133 tRNA synthetases class I (I, L, M and V) CHY23_00556 PF13673 Acetyltransferase (GNAT) domain CHY23_00557 PF04364 DNA polymerase III chi subunit, HolC CHY23_00558 PF01476 LysM domain CHY23_00559 PF05698 Bacterial trigger factor protein (TF) C-terminus CHY23_00559 PF05697 Bacterial trigger factor protein (TF) CHY23_00559 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CHY23_00560 PF00581 Rhodanese-like domain CHY23_00561 PF02556 Preprotein translocase subunit SecB CHY23_00562 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CHY23_00562 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CHY23_00563 PF00132 Bacterial transferase hexapeptide (six repeats) CHY23_00563 PF06426 Serine acetyltransferase, N-terminal CHY23_00564 PF03143 Elongation factor Tu C-terminal domain CHY23_00564 PF03144 Elongation factor Tu domain 2 CHY23_00564 PF00009 Elongation factor Tu GTP binding domain CHY23_00569 PF00485 Phosphoribulokinase / Uridine kinase family CHY23_00570 PF08534 Redoxin CHY23_00571 PF03918 Cytochrome C biogenesis protein CHY23_00572 PF03918 Cytochrome C biogenesis protein CHY23_00573 PF00994 Probable molybdopterin binding domain CHY23_00574 PF00543 Nitrogen regulatory protein P-II CHY23_00575 PF01252 Signal peptidase (SPase) II CHY23_00576 PF02401 LytB protein CHY23_00577 PF03937 Flavinator of succinate dehydrogenase CHY23_00579 PF04055 Radical SAM superfamily CHY23_00580 PF00043 Glutathione S-transferase, C-terminal domain CHY23_00580 PF02798 Glutathione S-transferase, N-terminal domain CHY23_00581 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CHY23_00581 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CHY23_00583 PF02313 Fumarate reductase subunit D CHY23_00584 PF02300 Fumarate reductase subunit C CHY23_00585 PF13183 4Fe-4S dicluster domain CHY23_00585 PF13085 2Fe-2S iron-sulfur cluster binding domain CHY23_00586 PF02910 Fumarate reductase flavoprotein C-term CHY23_00586 PF00890 FAD binding domain CHY23_00587 PF00152 tRNA synthetases class II (D, K and N) CHY23_00588 PF01678 Diaminopimelate epimerase CHY23_00589 PF03605 Anaerobic c4-dicarboxylate membrane transporter CHY23_00590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CHY23_00594 PF03702 Anhydro-N-acetylmuramic acid kinase CHY23_00595 PF01380 SIS domain CHY23_00599 PF01523 Putative modulator of DNA gyrase CHY23_00600 PF09179 TilS substrate binding domain CHY23_00600 PF01171 PP-loop family CHY23_00600 PF11734 TilS substrate C-terminal domain CHY23_00602 PF00589 Phage integrase family CHY23_00602 PF02899 Phage integrase, N-terminal SAM-like domain CHY23_00614 PF03808 Glycosyl transferase WecB/TagA/CpsF family CHY23_00615 PF06899 WzyE protein, O-antigen assembly polymerase CHY23_00616 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CHY23_00617 PF03063 Prismane/CO dehydrogenase family CHY23_00618 PF00111 2Fe-2S iron-sulfur cluster binding domain CHY23_00618 PF00175 Oxidoreductase NAD-binding domain CHY23_00618 PF00970 Oxidoreductase FAD-binding domain CHY23_00619 PF01943 Polysaccharide biosynthesis protein CHY23_00620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CHY23_00622 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHY23_00622 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHY23_00622 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHY23_00623 PF02350 UDP-N-acetylglucosamine 2-epimerase CHY23_00626 PF00953 Glycosyl transferase family 4 CHY23_00627 PF00202 Aminotransferase class-III CHY23_00629 PF03023 Lipid II flippase MurJ CHY23_00630 PF01649 Ribosomal protein S20 CHY23_00631 PF02254 TrkA-N domain CHY23_00631 PF02080 TrkA-C domain CHY23_00632 PF01029 NusB family CHY23_00632 PF01189 16S rRNA methyltransferase RsmB/F CHY23_00633 PF09106 Elongation factor SelB, winged helix CHY23_00633 PF03144 Elongation factor Tu domain 2 CHY23_00633 PF00009 Elongation factor Tu GTP binding domain CHY23_00633 PF09107 Elongation factor SelB, winged helix CHY23_00634 PF03841 L-seryl-tRNA selenium transferase CHY23_00634 PF12390 Selenocysteine synthase N terminal CHY23_00636 PF00258 Flavodoxin CHY23_00638 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHY23_00638 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHY23_00639 PF00593 TonB dependent receptor CHY23_00639 PF07715 TonB-dependent Receptor Plug Domain CHY23_00641 PF02472 Biopolymer transport protein ExbD/TolR CHY23_00642 PF01618 MotA/TolQ/ExbB proton channel family CHY23_00644 PF03956 Lysine exporter LysO CHY23_00645 PF02615 Malate/L-lactate dehydrogenase CHY23_00646 PF06821 Serine hydrolase CHY23_00647 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CHY23_00647 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CHY23_00652 PF00535 Glycosyl transferase family 2 CHY23_00652 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CHY23_00653 PF17101 Stealth protein CR1, conserved region 1 CHY23_00653 PF11380 Stealth protein CR2, conserved region 2 CHY23_00654 PF02563 Polysaccharide biosynthesis/export protein CHY23_00656 PF01061 ABC-2 type transporter CHY23_00657 PF00005 ABC transporter CHY23_00658 PF00005 ABC transporter CHY23_00659 PF00005 ABC transporter CHY23_00660 PF00551 Formyl transferase CHY23_00660 PF02911 Formyl transferase, C-terminal domain CHY23_00662 PF01205 Uncharacterized protein family UPF0029 CHY23_00662 PF09186 Domain of unknown function (DUF1949) CHY23_00663 PF02386 Cation transport protein CHY23_00664 PF12724 Flavodoxin domain CHY23_00665 PF01741 Large-conductance mechanosensitive channel, MscL CHY23_00666 PF04055 Radical SAM superfamily CHY23_00667 PF03099 Biotin/lipoate A/B protein ligase family CHY23_00668 PF04359 Protein of unknown function (DUF493) CHY23_00669 PF07943 Penicillin-binding protein 5, C-terminal domain CHY23_00669 PF00768 D-alanyl-D-alanine carboxypeptidase CHY23_00670 PF03330 Lytic transglycolase CHY23_00671 PF01098 Cell cycle protein CHY23_00672 PF03717 Penicillin-binding Protein dimerisation domain CHY23_00672 PF00905 Penicillin binding protein transpeptidase domain CHY23_00673 PF02590 Predicted SPOUT methyltransferase CHY23_00675 PF05192 MutS domain III CHY23_00675 PF05188 MutS domain II CHY23_00675 PF00488 MutS domain V CHY23_00675 PF05190 MutS family domain IV CHY23_00675 PF01624 MutS domain I CHY23_00676 PF00005 ABC transporter CHY23_00677 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00678 PF03313 Serine dehydratase alpha chain CHY23_00679 PF04405 Domain of Unknown function (DUF542) CHY23_00679 PF01814 Hemerythrin HHE cation binding domain CHY23_00680 PF00893 Small Multidrug Resistance protein CHY23_00681 PF04175 Protein of unknown function (DUF406) CHY23_00684 PF01774 UreD urease accessory protein CHY23_00685 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHY23_00686 PF01730 UreF CHY23_00687 PF05194 UreE urease accessory protein, C-terminal domain CHY23_00687 PF02814 UreE urease accessory protein, N-terminal domain CHY23_00689 PF00449 Urease alpha-subunit, N-terminal domain CHY23_00689 PF01979 Amidohydrolase family CHY23_00690 PF00699 Urease beta subunit CHY23_00691 PF00547 Urease, gamma subunit CHY23_00693 PF00005 ABC transporter CHY23_00695 PF01891 Cobalt uptake substrate-specific transmembrane region CHY23_00697 PF10670 Domain of unknown function (DUF4198) CHY23_00698 PF03466 LysR substrate binding domain CHY23_00698 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00700 PF02080 TrkA-C domain CHY23_00700 PF03600 Citrate transporter CHY23_00701 PF05068 Mannitol repressor CHY23_00702 PF08125 Mannitol dehydrogenase C-terminal domain CHY23_00702 PF01232 Mannitol dehydrogenase Rossmann domain CHY23_00703 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CHY23_00703 PF02378 Phosphotransferase system, EIIC CHY23_00703 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CHY23_00704 PF01380 SIS domain CHY23_00705 PF08220 DeoR-like helix-turn-helix domain CHY23_00705 PF00455 DeoR C terminal sensor domain CHY23_00708 PF18254 HMW1 domain 2 CHY23_00708 PF18071 HMW1C N-terminal CHY23_00709 PF00919 Uncharacterized protein family UPF0004 CHY23_00709 PF04055 Radical SAM superfamily CHY23_00709 PF18693 TRAM domain CHY23_00710 PF01048 Phosphorylase superfamily CHY23_00712 PF04102 SlyX CHY23_00713 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CHY23_00713 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CHY23_00714 PF13309 HTH domain CHY23_00714 PF08348 YheO-like PAS domain CHY23_00715 PF02635 DsrE/DsrF-like family CHY23_00716 PF02635 DsrE/DsrF-like family CHY23_00717 PF04077 DsrH like protein CHY23_00722 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CHY23_00723 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHY23_00723 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHY23_00724 PF00231 ATP synthase CHY23_00725 PF00306 ATP synthase alpha/beta chain, C terminal domain CHY23_00725 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHY23_00725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHY23_00726 PF00213 ATP synthase delta (OSCP) subunit CHY23_00727 PF00430 ATP synthase B/B' CF(0) CHY23_00728 PF00137 ATP synthase subunit C CHY23_00729 PF00119 ATP synthase A chain CHY23_00731 PF02527 rRNA small subunit methyltransferase G CHY23_00732 PF13932 GidA associated domain CHY23_00732 PF01134 Glucose inhibited division protein A CHY23_00734 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHY23_00735 PF02810 SEC-C motif CHY23_00737 PF03613 PTS system mannose/fructose/sorbose family IID component CHY23_00738 PF03609 PTS system sorbose-specific iic component CHY23_00739 PF03610 PTS system fructose IIA component CHY23_00739 PF03830 PTS system sorbose subfamily IIB component CHY23_00740 PF02447 GntP family permease CHY23_00741 PF01202 Shikimate kinase CHY23_00742 PF00356 Bacterial regulatory proteins, lacI family CHY23_00742 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CHY23_00743 PF00356 Bacterial regulatory proteins, lacI family CHY23_00744 PF05025 RbsD / FucU transport protein family CHY23_00745 PF00005 ABC transporter CHY23_00746 PF02653 Branched-chain amino acid transport system / permease component CHY23_00747 PF13407 Periplasmic binding protein domain CHY23_00748 PF00294 pfkB family carbohydrate kinase CHY23_00749 PF00384 Molybdopterin oxidoreductase CHY23_00749 PF01568 Molydopterin dinucleotide binding domain CHY23_00749 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHY23_00750 PF12800 4Fe-4S binding domain CHY23_00750 PF13247 4Fe-4S dicluster domain CHY23_00751 PF04976 DMSO reductase anchor subunit (DmsC) CHY23_00752 PF02613 Nitrate reductase delta subunit CHY23_00753 PF00037 4Fe-4S binding domain CHY23_00753 PF12838 4Fe-4S dicluster domain CHY23_00757 PF02769 AIR synthase related protein, C-terminal domain CHY23_00757 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CHY23_00757 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CHY23_00758 PF00455 DeoR C terminal sensor domain CHY23_00758 PF08220 DeoR-like helix-turn-helix domain CHY23_00759 PF07881 L-fucose isomerase, first N-terminal domain CHY23_00759 PF07882 L-fucose isomerase, second N-terminal domain CHY23_00759 PF02952 L-fucose isomerase, C-terminal domain CHY23_00760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHY23_00760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHY23_00761 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHY23_00761 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHY23_00762 PF05025 RbsD / FucU transport protein family CHY23_00763 PF00596 Class II Aldolase and Adducin N-terminal domain CHY23_00764 PF07690 Major Facilitator Superfamily CHY23_00765 PF00465 Iron-containing alcohol dehydrogenase CHY23_00766 PF07274 Protein of unknown function (DUF1440) CHY23_00769 PF00005 ABC transporter CHY23_00770 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHY23_00771 PF05159 Capsule polysaccharide biosynthesis protein CHY23_00772 PF05159 Capsule polysaccharide biosynthesis protein CHY23_00774 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CHY23_00775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CHY23_00776 PF03611 PTS system sugar-specific permease component CHY23_00778 PF00455 DeoR C terminal sensor domain CHY23_00778 PF08220 DeoR-like helix-turn-helix domain CHY23_00779 PF01261 Xylose isomerase-like TIM barrel CHY23_00780 PF00596 Class II Aldolase and Adducin N-terminal domain CHY23_00781 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CHY23_00781 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CHY23_00786 PF01370 NAD dependent epimerase/dehydratase family CHY23_00787 PF01327 Polypeptide deformylase CHY23_00788 PF02481 DNA recombination-mediator protein A CHY23_00788 PF17782 DprA winged helix domain CHY23_00789 PF03169 OPT oligopeptide transporter protein CHY23_00790 PF03611 PTS system sugar-specific permease component CHY23_00792 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CHY23_00793 PF00467 KOW motif CHY23_00793 PF02357 Transcription termination factor nusG CHY23_00794 PF00298 Ribosomal protein L11, RNA binding domain CHY23_00794 PF03946 Ribosomal protein L11, N-terminal domain CHY23_00795 PF00687 Ribosomal protein L1p/L10e family CHY23_00796 PF00466 Ribosomal protein L10 CHY23_00797 PF00542 Ribosomal protein L7/L12 C-terminal domain CHY23_00797 PF16320 Ribosomal protein L7/L12 dimerisation domain CHY23_00806 PF04563 RNA polymerase beta subunit CHY23_00806 PF04560 RNA polymerase Rpb2, domain 7 CHY23_00806 PF00562 RNA polymerase Rpb2, domain 6 CHY23_00806 PF10385 RNA polymerase beta subunit external 1 domain CHY23_00806 PF04565 RNA polymerase Rpb2, domain 3 CHY23_00806 PF04561 RNA polymerase Rpb2, domain 2 CHY23_00807 PF04998 RNA polymerase Rpb1, domain 5 CHY23_00807 PF04983 RNA polymerase Rpb1, domain 3 CHY23_00807 PF04997 RNA polymerase Rpb1, domain 1 CHY23_00807 PF05000 RNA polymerase Rpb1, domain 4 CHY23_00807 PF00623 RNA polymerase Rpb1, domain 2 CHY23_00809 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CHY23_00810 PF01850 PIN domain CHY23_00813 PF00004 ATPase family associated with various cellular activities (AAA) CHY23_00813 PF07724 AAA domain (Cdc48 subfamily) CHY23_00813 PF10431 C-terminal, D2-small domain, of ClpB protein CHY23_00814 PF00227 Proteasome subunit CHY23_00815 PF03749 Sugar fermentation stimulation protein RE domain CHY23_00815 PF17746 SfsA N-terminal OB domain CHY23_00816 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHY23_00817 PF14815 NUDIX domain CHY23_00817 PF00730 HhH-GPD superfamily base excision DNA repair protein CHY23_00818 PF04362 Bacterial Fe(2+) trafficking CHY23_00819 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CHY23_00819 PF01464 Transglycosylase SLT domain CHY23_00824 PF00448 SRP54-type protein, GTPase domain CHY23_00824 PF02978 Signal peptide binding domain CHY23_00824 PF02881 SRP54-type protein, helical bundle domain CHY23_00825 PF02872 5'-nucleotidase, C-terminal domain CHY23_00825 PF00149 Calcineurin-like phosphoesterase CHY23_00826 PF01494 FAD binding domain CHY23_00827 PF01381 Helix-turn-helix CHY23_00828 PF13335 Magnesium chelatase, subunit ChlI C-terminal CHY23_00828 PF01078 Magnesium chelatase, subunit ChlI CHY23_00830 PF00561 alpha/beta hydrolase fold CHY23_00831 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHY23_00831 PF16582 Middle domain of thiamine pyrophosphate CHY23_00831 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHY23_00832 PF13472 GDSL-like Lipase/Acylhydrolase family CHY23_00832 PF02348 Cytidylyltransferase CHY23_00833 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CHY23_00834 PF00480 ROK family CHY23_00835 PF00701 Dihydrodipicolinate synthetase family CHY23_00836 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CHY23_00837 PF01979 Amidohydrolase family CHY23_00838 PF10415 Fumarase C C-terminus CHY23_00838 PF00206 Lyase CHY23_00840 PF00338 Ribosomal protein S10p/S20e CHY23_00841 PF00297 Ribosomal protein L3 CHY23_00842 PF00573 Ribosomal protein L4/L1 family CHY23_00843 PF00276 Ribosomal protein L23 CHY23_00844 PF00181 Ribosomal Proteins L2, RNA binding domain CHY23_00844 PF03947 Ribosomal Proteins L2, C-terminal domain CHY23_00845 PF00203 Ribosomal protein S19 CHY23_00846 PF00237 Ribosomal protein L22p/L17e CHY23_00847 PF00189 Ribosomal protein S3, C-terminal domain CHY23_00847 PF07650 KH domain CHY23_00848 PF00252 Ribosomal protein L16p/L10e CHY23_00849 PF00831 Ribosomal L29 protein CHY23_00850 PF00366 Ribosomal protein S17 CHY23_00851 PF00238 Ribosomal protein L14p/L23e CHY23_00852 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CHY23_00852 PF00467 KOW motif CHY23_00853 PF00673 ribosomal L5P family C-terminus CHY23_00853 PF00281 Ribosomal protein L5 CHY23_00854 PF00253 Ribosomal protein S14p/S29e CHY23_00855 PF00410 Ribosomal protein S8 CHY23_00856 PF00347 Ribosomal protein L6 CHY23_00857 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CHY23_00858 PF00333 Ribosomal protein S5, N-terminal domain CHY23_00858 PF03719 Ribosomal protein S5, C-terminal domain CHY23_00859 PF00327 Ribosomal protein L30p/L7e CHY23_00860 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CHY23_00861 PF00344 SecY translocase CHY23_00862 PF00444 Ribosomal protein L36 CHY23_00863 PF00416 Ribosomal protein S13/S18 CHY23_00864 PF00411 Ribosomal protein S11 CHY23_00865 PF01479 S4 domain CHY23_00865 PF00163 Ribosomal protein S4/S9 N-terminal domain CHY23_00866 PF01000 RNA polymerase Rpb3/RpoA insert domain CHY23_00866 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CHY23_00866 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CHY23_00867 PF01196 Ribosomal protein L17 CHY23_00868 PF00886 Ribosomal protein S16 CHY23_00869 PF01782 RimM N-terminal domain CHY23_00869 PF05239 PRC-barrel domain CHY23_00870 PF01746 tRNA (Guanine-1)-methyltransferase CHY23_00871 PF01245 Ribosomal protein L19 CHY23_00872 PF08007 Cupin superfamily protein CHY23_00874 PF01032 FecCD transport family CHY23_00875 PF00005 ABC transporter CHY23_00876 PF00127 Copper binding proteins, plastocyanin/azurin family CHY23_00879 PF02613 Nitrate reductase delta subunit CHY23_00880 PF18364 Molybdopterin oxidoreductase N-terminal domain CHY23_00880 PF01568 Molydopterin dinucleotide binding domain CHY23_00880 PF00384 Molybdopterin oxidoreductase CHY23_00882 PF02091 Glycyl-tRNA synthetase alpha subunit CHY23_00883 PF04480 Protein of unknown function (DUF559) CHY23_00885 PF02092 Glycyl-tRNA synthetase beta subunit CHY23_00885 PF05746 DALR anticodon binding domain CHY23_00886 PF17347 Family of unknown function (DUF5377) CHY23_00887 PF00589 Phage integrase family CHY23_00887 PF02899 Phage integrase, N-terminal SAM-like domain CHY23_00888 PF04304 Protein of unknown function (DUF454) CHY23_00889 PF00535 Glycosyl transferase family 2 CHY23_00890 PF00149 Calcineurin-like phosphoesterase CHY23_00891 PF07509 Protein of unknown function (DUF1523) CHY23_00892 PF01026 TatD related DNase CHY23_00895 PF02687 FtsX-like permease family CHY23_00895 PF00005 ABC transporter CHY23_00895 PF12704 MacB-like periplasmic core domain CHY23_00896 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CHY23_00897 PF06629 MltA-interacting protein MipA CHY23_00898 PF09115 DNA polymerase III, delta subunit, C terminal CHY23_00899 PF02223 Thymidylate kinase CHY23_00900 PF02618 YceG-like family CHY23_00904 PF00550 Phosphopantetheine attachment site CHY23_00905 PF00834 Ribulose-phosphate 3 epimerase family CHY23_00906 PF01197 Ribosomal protein L31 CHY23_00907 PF00444 Ribosomal protein L36 CHY23_00908 PF14814 Bifunctional transglycosylase second domain CHY23_00908 PF00905 Penicillin binding protein transpeptidase domain CHY23_00908 PF00912 Transglycosylase CHY23_00909 PF00378 Enoyl-CoA hydratase/isomerase CHY23_00910 PF02824 TGS domain CHY23_00910 PF13291 ACT domain CHY23_00910 PF04607 Region found in RelA / SpoT proteins CHY23_00911 PF01192 RNA polymerase Rpb6 CHY23_00912 PF17191 RecG wedge domain CHY23_00912 PF00271 Helicase conserved C-terminal domain CHY23_00912 PF00270 DEAD/DEAH box helicase CHY23_00915 PF03129 Anticodon binding domain CHY23_00915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHY23_00915 PF04073 Aminoacyl-tRNA editing domain CHY23_00917 PF04542 Sigma-70 region 2 CHY23_00917 PF08281 Sigma-70, region 4 CHY23_00918 PF00174 Oxidoreductase molybdopterin binding domain CHY23_00919 PF01794 Ferric reductase like transmembrane component CHY23_00920 PF00140 Sigma-70 factor, region 1.2 CHY23_00920 PF04542 Sigma-70 region 2 CHY23_00920 PF04545 Sigma-70, region 4 CHY23_00921 PF07690 Major Facilitator Superfamily CHY23_00923 PF13356 Arm DNA-binding domain CHY23_00923 PF00589 Phage integrase family CHY23_00926 PF03466 LysR substrate binding domain CHY23_00926 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00927 PF03616 Sodium/glutamate symporter CHY23_00931 PF00440 Bacterial regulatory proteins, tetR family CHY23_00931 PF02909 Tetracyclin repressor-like, C-terminal domain CHY23_00932 PF07690 Major Facilitator Superfamily CHY23_00933 PF00440 Bacterial regulatory proteins, tetR family CHY23_00934 PF12833 Helix-turn-helix domain CHY23_00936 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CHY23_00936 PF17287 POTRA domain CHY23_00936 PF08479 POTRA domain, ShlB-type CHY23_00937 PF13018 Extended Signal Peptide of Type V secretion system CHY23_00937 PF05860 haemagglutination activity domain CHY23_00937 PF04829 Pre-toxin domain with VENN motif CHY23_00937 PF13332 Hemagglutinin repeat CHY23_00937 PF13018 Extended Signal Peptide of Type V secretion system CHY23_00937 PF13332 Hemagglutinin repeat CHY23_00937 PF04829 Pre-toxin domain with VENN motif CHY23_00937 PF05860 haemagglutination activity domain CHY23_00941 PF05930 Prophage CP4-57 regulatory protein (AlpA) CHY23_00944 PF03590 Aspartate-ammonia ligase CHY23_00945 PF13404 AsnC-type helix-turn-helix domain CHY23_00945 PF01037 Lrp/AsnC ligand binding domain CHY23_00946 PF01048 Phosphorylase superfamily CHY23_00947 PF04345 Chorismate lyase CHY23_00948 PF01177 Asp/Glu/Hydantoin racemase CHY23_00954 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CHY23_00954 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CHY23_00955 PF00667 FAD binding domain CHY23_00955 PF00258 Flavodoxin CHY23_00955 PF00175 Oxidoreductase NAD-binding domain CHY23_00956 PF00009 Elongation factor Tu GTP binding domain CHY23_00957 PF01507 Phosphoadenosine phosphosulfate reductase family CHY23_00958 PF01507 Phosphoadenosine phosphosulfate reductase family CHY23_00959 PF10414 Sirohaem synthase dimerisation region CHY23_00959 PF14824 Sirohaem biosynthesis protein central CHY23_00959 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHY23_00961 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00962 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_00963 PF00005 ABC transporter CHY23_00963 PF17850 CysA C-terminal regulatory domain CHY23_00963 PF12857 TOBE-like domain CHY23_00965 PF01070 FMN-dependent dehydrogenase CHY23_00966 PF02237 Biotin protein ligase C terminal domain CHY23_00966 PF03099 Biotin/lipoate A/B protein ligase family CHY23_00966 PF08279 HTH domain CHY23_00967 PF01565 FAD binding domain CHY23_00967 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CHY23_00968 PF00691 OmpA family CHY23_00968 PF01389 OmpA-like transmembrane domain CHY23_00969 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CHY23_00969 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CHY23_00970 PF04403 Paraquat-inducible protein A CHY23_00971 PF01841 Transglutaminase-like superfamily CHY23_00973 PF00403 Heavy-metal-associated domain CHY23_00974 PF00465 Iron-containing alcohol dehydrogenase CHY23_00975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_00975 PF03466 LysR substrate binding domain CHY23_00976 PF14602 Hexapeptide repeat of succinyl-transferase CHY23_00976 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CHY23_00976 PF00132 Bacterial transferase hexapeptide (six repeats) CHY23_00977 PF01220 Dehydroquinase class II CHY23_00978 PF04488 Glycosyltransferase sugar-binding region containing DXD motif CHY23_00979 PF00364 Biotin-requiring enzyme CHY23_00980 PF00289 Biotin carboxylase, N-terminal domain CHY23_00980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHY23_00980 PF02785 Biotin carboxylase C-terminal domain CHY23_00981 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CHY23_00982 PF06288 Protein of unknown function (DUF1040) CHY23_00983 PF01323 DSBA-like thioredoxin domain CHY23_00985 PF05036 Sporulation related domain CHY23_00985 PF05036 Sporulation related domain CHY23_00986 PF04445 Putative SAM-dependent methyltransferase CHY23_00987 PF02557 D-alanyl-D-alanine carboxypeptidase CHY23_00988 PF01546 Peptidase family M20/M25/M40 CHY23_00988 PF07687 Peptidase dimerisation domain CHY23_00989 PF03960 ArsC family CHY23_00991 PF00809 Pterin binding enzyme CHY23_00992 PF01479 S4 domain CHY23_00992 PF00849 RNA pseudouridylate synthase CHY23_00994 PF05552 Conserved TM helix CHY23_00994 PF00924 Mechanosensitive ion channel CHY23_00995 PF02785 Biotin carboxylase C-terminal domain CHY23_00995 PF00289 Biotin carboxylase, N-terminal domain CHY23_00995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHY23_00997 PF05193 Peptidase M16 inactive domain CHY23_00997 PF00675 Insulinase (Peptidase family M16) CHY23_00997 PF16187 Middle or third domain of peptidase_M16 CHY23_00998 PF17946 RecC C-terminal domain CHY23_01003 PF07977 FabA-like domain CHY23_01004 PF05362 Lon protease (S16) C-terminal proteolytic domain CHY23_01004 PF13654 AAA domain CHY23_01005 PF17414 MatP C-terminal ribbon-helix-helix domain CHY23_01005 PF06303 MatP N-terminal domain CHY23_01006 PF00579 tRNA synthetases class I (W and Y) CHY23_01007 PF13419 Haloacid dehalogenase-like hydrolase CHY23_01009 PF01790 Prolipoprotein diacylglyceryl transferase CHY23_01010 PF01925 Sulfite exporter TauE/SafE CHY23_01011 PF00293 NUDIX domain CHY23_01013 PF00719 Inorganic pyrophosphatase CHY23_01014 PF05175 Methyltransferase small domain CHY23_01015 PF03737 Aldolase/RraA CHY23_01016 PF01226 Formate/nitrite transporter CHY23_01018 PF13333 Integrase core domain CHY23_01018 PF00665 Integrase core domain CHY23_01019 PF13276 HTH-like domain CHY23_01019 PF13333 Integrase core domain CHY23_01019 PF00665 Integrase core domain CHY23_01022 PF00684 DnaJ central domain CHY23_01022 PF00226 DnaJ domain CHY23_01022 PF01556 DnaJ C terminal domain CHY23_01023 PF00012 Hsp70 protein CHY23_01024 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHY23_01024 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHY23_01026 PF13407 Periplasmic binding protein domain CHY23_01027 PF00005 ABC transporter CHY23_01028 PF02653 Branched-chain amino acid transport system / permease component CHY23_01029 PF12833 Helix-turn-helix domain CHY23_01030 PF05649 Peptidase family M13 CHY23_01030 PF01431 Peptidase family M13 CHY23_01031 PF10571 Uncharacterised protein family UPF0547 CHY23_01032 PF00474 Sodium:solute symporter family CHY23_01033 PF06196 Protein of unknown function (DUF997) CHY23_01034 PF01340 Met Apo-repressor, MetJ CHY23_01035 PF04333 MlaA lipoprotein CHY23_01036 PF01263 Aldose 1-epimerase CHY23_01039 PF14883 Hypothetical glycosyl hydrolase family 13 CHY23_01039 PF01522 Polysaccharide deacetylase CHY23_01040 PF00535 Glycosyl transferase family 2 CHY23_01042 PF00121 Triosephosphate isomerase CHY23_01043 PF01142 tRNA pseudouridine synthase D (TruD) CHY23_01044 PF01975 Survival protein SurE CHY23_01045 PF09335 SNARE associated Golgi protein CHY23_01048 PF01551 Peptidase family M23 CHY23_01048 PF01476 LysM domain CHY23_01049 PF03352 Methyladenine glycosylase CHY23_01051 PF07670 Nucleoside recognition CHY23_01052 PF07670 Nucleoside recognition CHY23_01053 PF00762 Ferrochelatase CHY23_01054 PF00468 Ribosomal protein L34 CHY23_01055 PF00825 Ribonuclease P CHY23_01056 PF01809 Putative membrane protein insertion efficiency factor CHY23_01057 PF00120 Glutamine synthetase, catalytic domain CHY23_01057 PF03951 Glutamine synthetase, beta-Grasp domain CHY23_01058 PF00149 Calcineurin-like phosphoesterase CHY23_01059 PF00293 NUDIX domain CHY23_01060 PF06146 Phosphate-starvation-inducible E CHY23_01061 PF01648 4'-phosphopantetheinyl transferase superfamily CHY23_01062 PF00892 EamA-like transporter family CHY23_01063 PF06965 Na+/H+ antiporter 1 CHY23_01065 PF02580 D-Tyr-tRNA(Tyr) deacylase CHY23_01066 PF03631 Virulence factor BrkB CHY23_01067 PF00171 Aldehyde dehydrogenase family CHY23_01068 PF07715 TonB-dependent Receptor Plug Domain CHY23_01068 PF00593 TonB dependent receptor CHY23_01069 PF00593 TonB dependent receptor CHY23_01069 PF07715 TonB-dependent Receptor Plug Domain CHY23_01070 PF07715 TonB-dependent Receptor Plug Domain CHY23_01070 PF00593 TonB dependent receptor CHY23_01073 PF08676 MutL C terminal dimerisation domain CHY23_01073 PF01119 DNA mismatch repair protein, C-terminal domain CHY23_01074 PF00107 Zinc-binding dehydrogenase CHY23_01074 PF08240 Alcohol dehydrogenase GroES-like domain CHY23_01076 PF17209 Hfq protein CHY23_01077 PF16360 GTP-binding GTPase Middle Region CHY23_01077 PF13167 GTP-binding GTPase N-terminal CHY23_01077 PF01926 50S ribosome-binding GTPase CHY23_01078 PF03641 Possible lysine decarboxylase CHY23_01079 PF03819 MazG nucleotide pyrophosphohydrolase domain CHY23_01080 PF00027 Cyclic nucleotide-binding domain CHY23_01080 PF13545 Crp-like helix-turn-helix domain CHY23_01081 PF06794 Uncharacterised protein family (UPF0270) CHY23_01082 PF00440 Bacterial regulatory proteins, tetR family CHY23_01083 PF00440 Bacterial regulatory proteins, tetR family CHY23_01084 PF00692 dUTPase CHY23_01085 PF02441 Flavoprotein CHY23_01085 PF04127 DNA / pantothenate metabolism flavoprotein CHY23_01086 PF04002 RadC-like JAB domain CHY23_01087 PF00830 Ribosomal L28 family CHY23_01088 PF00471 Ribosomal protein L33 CHY23_01091 PF00202 Aminotransferase class-III CHY23_01092 PF00282 Pyridoxal-dependent decarboxylase conserved domain CHY23_01093 PF01206 Sulfurtransferase TusA CHY23_01094 PF04143 Sulphur transport CHY23_01095 PF04219 Protein of unknown function, DUF CHY23_01096 PF05958 tRNA (Uracil-5-)-methyltransferase CHY23_01099 PF01544 CorA-like Mg2+ transporter protein CHY23_01100 PF01209 ubiE/COQ5 methyltransferase family CHY23_01102 PF03109 ABC1 family CHY23_01103 PF02416 mttA/Hcf106 family CHY23_01105 PF00902 Sec-independent protein translocase protein (TatC) CHY23_01106 PF00490 Delta-aminolevulinic acid dehydratase CHY23_01108 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CHY23_01108 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CHY23_01108 PF06827 Zinc finger found in FPG and IleRS CHY23_01109 PF05525 Branched-chain amino acid transport protein CHY23_01111 PF00698 Acyl transferase domain CHY23_01112 PF02677 Epoxyqueuosine reductase QueH CHY23_01113 PF00348 Polyprenyl synthetase CHY23_01115 PF03358 NADPH-dependent FMN reductase CHY23_01116 PF07681 DoxX CHY23_01117 PF00829 Ribosomal prokaryotic L21 protein CHY23_01118 PF01016 Ribosomal L27 protein CHY23_01119 PF00892 EamA-like transporter family CHY23_01121 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CHY23_01122 PF00156 Phosphoribosyl transferase domain CHY23_01123 PF08468 Methyltransferase small domain N-terminal CHY23_01123 PF05175 Methyltransferase small domain CHY23_01125 PF00583 Acetyltransferase (GNAT) family CHY23_01126 PF00270 DEAD/DEAH box helicase CHY23_01126 PF00271 Helicase conserved C-terminal domain CHY23_01127 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CHY23_01127 PF01243 Pyridoxamine 5'-phosphate oxidase CHY23_01128 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHY23_01129 PF00171 Aldehyde dehydrogenase family CHY23_01130 PF01184 GPR1/FUN34/yaaH family CHY23_01131 PF00005 ABC transporter CHY23_01133 PF01032 FecCD transport family CHY23_01134 PF00593 TonB dependent receptor CHY23_01134 PF07715 TonB-dependent Receptor Plug Domain CHY23_01136 PF01259 SAICAR synthetase CHY23_01137 PF08029 HisG, C-terminal domain CHY23_01137 PF01634 ATP phosphoribosyltransferase CHY23_01138 PF00815 Histidinol dehydrogenase CHY23_01139 PF00155 Aminotransferase class I and II CHY23_01141 PF00475 Imidazoleglycerol-phosphate dehydratase CHY23_01143 PF00117 Glutamine amidotransferase class-I CHY23_01144 PF00977 Histidine biosynthesis protein CHY23_01145 PF00977 Histidine biosynthesis protein CHY23_01146 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CHY23_01146 PF01502 Phosphoribosyl-AMP cyclohydrolase CHY23_01147 PF02592 Putative vitamin uptake transporter CHY23_01148 PF00557 Metallopeptidase family M24 CHY23_01150 PF00356 Bacterial regulatory proteins, lacI family CHY23_01150 PF13407 Periplasmic binding protein domain CHY23_01151 PF00251 Glycosyl hydrolases family 32 N-terminal domain CHY23_01151 PF08244 Glycosyl hydrolases family 32 C terminal CHY23_01152 PF00294 pfkB family carbohydrate kinase CHY23_01153 PF07732 Multicopper oxidase CHY23_01154 PF12704 MacB-like periplasmic core domain CHY23_01154 PF02687 FtsX-like permease family CHY23_01155 PF00005 ABC transporter CHY23_01156 PF02687 FtsX-like permease family CHY23_01156 PF12704 MacB-like periplasmic core domain CHY23_01157 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHY23_01157 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHY23_01158 PF00793 DAHP synthetase I family CHY23_01159 PF13369 Transglutaminase-like superfamily CHY23_01160 PF13847 Methyltransferase domain CHY23_01160 PF17827 PrmC N-terminal domain CHY23_01162 PF00472 RF-1 domain CHY23_01162 PF03462 PCRF domain CHY23_01163 PF00308 Bacterial dnaA protein CHY23_01163 PF08299 Bacterial dnaA protein helix-turn-helix CHY23_01163 PF11638 DnaA N-terminal domain CHY23_01164 PF02768 DNA polymerase III beta subunit, C-terminal domain CHY23_01164 PF00712 DNA polymerase III beta subunit, N-terminal domain CHY23_01164 PF02767 DNA polymerase III beta subunit, central domain CHY23_01165 PF02463 RecF/RecN/SMC N terminal domain CHY23_01166 PF00080 Copper/zinc superoxide dismutase (SODC) CHY23_01167 PF02774 Semialdehyde dehydrogenase, dimerisation domain CHY23_01167 PF01118 Semialdehyde dehydrogenase, NAD binding domain CHY23_01169 PF02684 Lipid-A-disaccharide synthetase CHY23_01170 PF08496 Peptidase family S49 N-terminal CHY23_01170 PF01343 Peptidase family S49 CHY23_01171 PF02381 MraZ protein, putative antitoxin-like CHY23_01172 PF01795 MraW methylase family CHY23_01173 PF04999 Cell division protein FtsL CHY23_01174 PF03717 Penicillin-binding Protein dimerisation domain CHY23_01174 PF00905 Penicillin binding protein transpeptidase domain CHY23_01175 PF08245 Mur ligase middle domain CHY23_01175 PF02875 Mur ligase family, glutamate ligase domain CHY23_01175 PF01225 Mur ligase family, catalytic domain CHY23_01176 PF08245 Mur ligase middle domain CHY23_01176 PF01225 Mur ligase family, catalytic domain CHY23_01176 PF02875 Mur ligase family, glutamate ligase domain CHY23_01177 PF00953 Glycosyl transferase family 4 CHY23_01177 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CHY23_01178 PF02875 Mur ligase family, glutamate ligase domain CHY23_01178 PF08245 Mur ligase middle domain CHY23_01179 PF01098 Cell cycle protein CHY23_01180 PF03033 Glycosyltransferase family 28 N-terminal domain CHY23_01180 PF04101 Glycosyltransferase family 28 C-terminal domain CHY23_01181 PF02875 Mur ligase family, glutamate ligase domain CHY23_01181 PF08245 Mur ligase middle domain CHY23_01181 PF01225 Mur ligase family, catalytic domain CHY23_01182 PF01820 D-ala D-ala ligase N-terminus CHY23_01182 PF07478 D-ala D-ala ligase C-terminus CHY23_01183 PF03799 Cell division protein FtsQ CHY23_01183 PF08478 POTRA domain, FtsQ-type CHY23_01184 PF02491 SHS2 domain inserted in FTSA CHY23_01185 PF00091 Tubulin/FtsZ family, GTPase domain CHY23_01185 PF12327 FtsZ family, C-terminal domain CHY23_01186 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CHY23_01187 PF02463 RecF/RecN/SMC N terminal domain CHY23_01188 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHY23_01188 PF00005 ABC transporter CHY23_01189 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01189 PF12911 N-terminal TM domain of oligopeptide transport permease C CHY23_01190 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01191 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHY23_01192 PF16658 Class II release factor RF3, C-terminal domain CHY23_01192 PF03144 Elongation factor Tu domain 2 CHY23_01192 PF00009 Elongation factor Tu GTP binding domain CHY23_01195 PF01195 Peptidyl-tRNA hydrolase CHY23_01196 PF01926 50S ribosome-binding GTPase CHY23_01196 PF06071 Protein of unknown function (DUF933) CHY23_01199 PF05433 Glycine zipper 2TM domain CHY23_01200 PF06185 YecM protein CHY23_01201 PF05746 DALR anticodon binding domain CHY23_01201 PF00750 tRNA synthetases class I (R) CHY23_01201 PF03485 Arginyl tRNA synthetase N terminal domain CHY23_01202 PF01018 GTP1/OBG CHY23_01202 PF01926 50S ribosome-binding GTPase CHY23_01203 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) CHY23_01204 PF08032 RNA 2'-O ribose methyltransferase substrate binding CHY23_01204 PF00588 SpoU rRNA Methylase family CHY23_01205 PF13091 PLD-like domain CHY23_01206 PF00133 tRNA synthetases class I (I, L, M and V) CHY23_01206 PF08264 Anticodon-binding domain of tRNA CHY23_01206 PF06827 Zinc finger found in FPG and IleRS CHY23_01207 PF01687 Riboflavin kinase CHY23_01207 PF06574 FAD synthetase CHY23_01208 PF13521 AAA domain CHY23_01208 PF01467 Cytidylyltransferase-like CHY23_01209 PF00149 Calcineurin-like phosphoesterase CHY23_01210 PF00486 Transcriptional regulatory protein, C terminal CHY23_01210 PF00072 Response regulator receiver domain CHY23_01213 PF01168 Alanine racemase, N-terminal domain CHY23_01217 PF00462 Glutaredoxin CHY23_01218 PF01138 3' exoribonuclease family, domain 1 CHY23_01218 PF03725 3' exoribonuclease family, domain 2 CHY23_01219 PF03755 YicC-like family, N-terminal region CHY23_01219 PF08340 Domain of unknown function (DUF1732) CHY23_01220 PF01571 Aminomethyltransferase folate-binding domain CHY23_01221 PF00037 4Fe-4S binding domain CHY23_01222 PF00072 Response regulator receiver domain CHY23_01222 PF00196 Bacterial regulatory proteins, luxR family CHY23_01223 PF02926 THUMP domain CHY23_01223 PF01170 Putative RNA methylase family UPF0020 CHY23_01223 PF10672 S-adenosylmethionine-dependent methyltransferase CHY23_01224 PF00588 SpoU rRNA Methylase family CHY23_01225 PF00923 Transaldolase/Fructose-6-phosphate aldolase CHY23_01230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHY23_01231 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHY23_01232 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01233 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01233 PF12911 N-terminal TM domain of oligopeptide transport permease C CHY23_01234 PF00005 ABC transporter CHY23_01234 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHY23_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHY23_01235 PF00005 ABC transporter CHY23_01236 PF06146 Phosphate-starvation-inducible E CHY23_01238 PF01042 Endoribonuclease L-PSP CHY23_01239 PF01063 Amino-transferase class IV CHY23_01240 PF00462 Glutaredoxin CHY23_01241 PF13662 Toprim domain CHY23_01241 PF02132 RecR protein CHY23_01242 PF02575 YbaB/EbfC DNA-binding family CHY23_01243 PF03544 Gram-negative bacterial TonB protein C-terminal CHY23_01244 PF02472 Biopolymer transport protein ExbD/TolR CHY23_01245 PF01618 MotA/TolQ/ExbB proton channel family CHY23_01246 PF00581 Rhodanese-like domain CHY23_01248 PF00381 PTS HPr component phosphorylation site CHY23_01248 PF03610 PTS system fructose IIA component CHY23_01248 PF00391 PEP-utilising enzyme, mobile domain CHY23_01248 PF05524 PEP-utilising enzyme, N-terminal CHY23_01249 PF02734 DAK2 domain CHY23_01250 PF02733 Dak1 domain CHY23_01251 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHY23_01252 PF02348 Cytidylyltransferase CHY23_01253 PF06078 Bacterial protein of unknown function (DUF937) CHY23_01254 PF09297 NADH pyrophosphatase zinc ribbon domain CHY23_01254 PF00293 NUDIX domain CHY23_01255 PF00849 RNA pseudouridylate synthase CHY23_01257 PF04186 FxsA cytoplasmic membrane protein CHY23_01258 PF00557 Metallopeptidase family M24 CHY23_01259 PF01206 Sulfurtransferase TusA CHY23_01260 PF06877 Regulator of ribonuclease activity B CHY23_01261 PF01926 50S ribosome-binding GTPase CHY23_01263 PF02535 ZIP Zinc transporter CHY23_01264 PF00920 Dehydratase family CHY23_01266 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHY23_01266 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHY23_01266 PF00205 Thiamine pyrophosphate enzyme, central domain CHY23_01267 PF02335 Cytochrome c552 CHY23_01269 PF13247 4Fe-4S dicluster domain CHY23_01270 PF03916 Polysulphide reductase, NrfD CHY23_01271 PF13018 Extended Signal Peptide of Type V secretion system CHY23_01271 PF05658 Head domain of trimeric autotransporter adhesin CHY23_01271 PF05658 Head domain of trimeric autotransporter adhesin CHY23_01271 PF05662 Coiled stalk of trimeric autotransporter adhesin CHY23_01271 PF05662 Coiled stalk of trimeric autotransporter adhesin CHY23_01271 PF03895 YadA-like membrane anchor domain CHY23_01271 PF03895 YadA-like membrane anchor domain CHY23_01271 PF13018 Extended Signal Peptide of Type V secretion system CHY23_01271 PF13018 Extended Signal Peptide of Type V secretion system CHY23_01271 PF05658 Head domain of trimeric autotransporter adhesin CHY23_01271 PF05662 Coiled stalk of trimeric autotransporter adhesin CHY23_01271 PF03895 YadA-like membrane anchor domain CHY23_01272 PF00860 Permease family CHY23_01273 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CHY23_01273 PF01619 Proline dehydrogenase CHY23_01273 PF00171 Aldehyde dehydrogenase family CHY23_01273 PF14850 DNA-binding domain of Proline dehydrogenase CHY23_01274 PF00474 Sodium:solute symporter family CHY23_01275 PF09339 IclR helix-turn-helix domain CHY23_01275 PF01614 Bacterial transcriptional regulator CHY23_01276 PF01812 5-formyltetrahydrofolate cyclo-ligase family CHY23_01277 PF05164 Cell division protein ZapA CHY23_01278 PF03695 Uncharacterised protein family (UPF0149) CHY23_01279 PF01208 Uroporphyrinogen decarboxylase (URO-D) CHY23_01280 PF04222 Protein of unknown function (DUF416) CHY23_01281 PF00216 Bacterial DNA-binding protein CHY23_01282 PF00303 Thymidylate synthase CHY23_01284 PF06968 Biotin and Thiamin Synthesis associated domain CHY23_01284 PF04055 Radical SAM superfamily CHY23_01285 PF00313 'Cold-shock' DNA-binding domain CHY23_01286 PF04352 ProQ/FINO family CHY23_01287 PF03572 Peptidase family S41 CHY23_01287 PF17804 Tail specific protease N-terminal domain CHY23_01287 PF11818 C-terminal domain of tail specific protease (DUF3340) CHY23_01287 PF00595 PDZ domain CHY23_01288 PF03734 L,D-transpeptidase catalytic domain CHY23_01289 PF05951 Bacterial protein of unknown function (DUF882) CHY23_01290 PF00753 Metallo-beta-lactamase superfamily CHY23_01293 PF01230 HIT domain CHY23_01294 PF00950 ABC 3 transport family CHY23_01295 PF00950 ABC 3 transport family CHY23_01296 PF01351 Ribonuclease HII CHY23_01297 PF03193 RsgA GTPase CHY23_01298 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_01298 PF03466 LysR substrate binding domain CHY23_01299 PF13419 Haloacid dehalogenase-like hydrolase CHY23_01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_01300 PF03466 LysR substrate binding domain CHY23_01302 PF17763 Glutaminase/Asparaginase C-terminal domain CHY23_01302 PF00710 Asparaginase, N-terminal CHY23_01303 PF06418 CTP synthase N-terminus CHY23_01303 PF00117 Glutamine amidotransferase class-I CHY23_01304 PF10063 Uncharacterized integral membrane protein (DUF2301) CHY23_01305 PF00694 Aconitase C-terminal domain CHY23_01306 PF00330 Aconitase family (aconitate hydratase) CHY23_01307 PF17853 GGDEF-like domain CHY23_01307 PF13556 PucR C-terminal helix-turn-helix domain CHY23_01307 PF05651 Putative sugar diacid recognition CHY23_01308 PF02447 GntP family permease CHY23_01309 PF02595 Glycerate kinase family CHY23_01310 PF00708 Acylphosphatase CHY23_01311 PF11398 Protein of unknown function (DUF2813) CHY23_01312 PF11892 Domain of unknown function (DUF3412) CHY23_01312 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CHY23_01312 PF03641 Possible lysine decarboxylase CHY23_01313 PF01207 Dihydrouridine synthase (Dus) CHY23_01315 PF00317 Ribonucleotide reductase, all-alpha domain CHY23_01315 PF02867 Ribonucleotide reductase, barrel domain CHY23_01315 PF03477 ATP cone domain CHY23_01316 PF01521 Iron-sulphur cluster biosynthesis CHY23_01316 PF01106 NifU-like domain CHY23_01317 PF11973 NQRA C-terminal domain CHY23_01317 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CHY23_01318 PF03116 NQR2, RnfD, RnfE family CHY23_01319 PF04205 FMN-binding domain CHY23_01320 PF02508 Rnf-Nqr subunit, membrane protein CHY23_01321 PF02508 Rnf-Nqr subunit, membrane protein CHY23_01322 PF00175 Oxidoreductase NAD-binding domain CHY23_01322 PF00111 2Fe-2S iron-sulfur cluster binding domain CHY23_01322 PF00970 Oxidoreductase FAD-binding domain CHY23_01323 PF02424 ApbE family CHY23_01324 PF04400 (Na+)-NQR maturation NqrM CHY23_01326 PF12832 MFS_1 like family CHY23_01327 PF03807 NADP oxidoreductase coenzyme F420-dependent CHY23_01327 PF14748 Pyrroline-5-carboxylate reductase dimerisation CHY23_01328 PF04381 Putative exonuclease, RdgC CHY23_01329 PF13419 Haloacid dehalogenase-like hydrolase CHY23_01332 PF02508 Rnf-Nqr subunit, membrane protein CHY23_01333 PF04060 Putative Fe-S cluster CHY23_01334 PF12838 4Fe-4S dicluster domain CHY23_01334 PF13375 RnfC Barrel sandwich hybrid domain CHY23_01334 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHY23_01335 PF03458 UPF0126 domain CHY23_01336 PF03116 NQR2, RnfD, RnfE family CHY23_01337 PF04205 FMN-binding domain CHY23_01338 PF02508 Rnf-Nqr subunit, membrane protein CHY23_01339 PF03279 Bacterial lipid A biosynthesis acyltransferase CHY23_01342 PF01258 Prokaryotic dksA/traR C4-type zinc finger CHY23_01343 PF12626 Polymerase A arginine-rich C-terminus CHY23_01343 PF01743 Poly A polymerase head domain CHY23_01343 PF12627 Probable RNA and SrmB- binding site of polymerase A CHY23_01344 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CHY23_01346 PF11739 Dicarboxylate transport CHY23_01348 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHY23_01349 PF00929 Exonuclease CHY23_01351 PF01817 Chorismate mutase type II CHY23_01351 PF02153 Prephenate dehydrogenase CHY23_01352 PF00793 DAHP synthetase I family CHY23_01353 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CHY23_01354 PF00224 Pyruvate kinase, barrel domain CHY23_01354 PF02887 Pyruvate kinase, alpha/beta domain CHY23_01355 PF00300 Histidine phosphatase superfamily (branch 1) CHY23_01356 PF01207 Dihydrouridine synthase (Dus) CHY23_01357 PF02954 Bacterial regulatory protein, Fis family CHY23_01358 PF00209 Sodium:neurotransmitter symporter family CHY23_01359 PF02086 D12 class N6 adenine-specific DNA methyltransferase CHY23_01360 PF01761 3-dehydroquinate synthase CHY23_01361 PF01202 Shikimate kinase CHY23_01362 PF17092 Penicillin-binding protein OB-like domain CHY23_01362 PF00905 Penicillin binding protein transpeptidase domain CHY23_01362 PF00912 Transglycosylase CHY23_01363 PF11104 Type IV pilus assembly protein PilM; CHY23_01367 PF00263 Bacterial type II and III secretion system protein CHY23_01367 PF03958 Bacterial type II/III secretion system short domain CHY23_01368 PF01029 NusB family CHY23_01369 PF00586 AIR synthase related protein, N-terminal domain CHY23_01369 PF02769 AIR synthase related protein, C-terminal domain CHY23_01370 PF04608 Phosphatidylglycerophosphatase A CHY23_01371 PF01810 LysE type translocator CHY23_01372 PF08032 RNA 2'-O ribose methyltransferase substrate binding CHY23_01372 PF00588 SpoU rRNA Methylase family CHY23_01373 PF00459 Inositol monophosphatase family CHY23_01374 PF02779 Transketolase, pyrimidine binding domain CHY23_01374 PF02780 Transketolase, C-terminal domain CHY23_01374 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CHY23_01375 PF00665 Integrase core domain CHY23_01375 PF13333 Integrase core domain CHY23_01377 PF00464 Serine hydroxymethyltransferase CHY23_01378 PF00464 Serine hydroxymethyltransferase CHY23_01379 PF01513 ATP-NAD kinase CHY23_01380 PF18019 HD domain CHY23_01381 PF01867 CRISPR associated protein Cas1 CHY23_01383 PF09615 CRISPR-associated protein (Cas_Csy3) CHY23_01384 PF09614 CRISPR-associated protein (Cas_Csy2) CHY23_01386 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHY23_01386 PF02824 TGS domain CHY23_01386 PF03129 Anticodon binding domain CHY23_01386 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CHY23_01387 PF00665 Integrase core domain CHY23_01387 PF13333 Integrase core domain CHY23_01389 PF03783 Curli production assembly/transport component CsgG CHY23_01391 PF05643 Putative bacterial lipoprotein (DUF799) CHY23_01392 PF00707 Translation initiation factor IF-3, C-terminal domain CHY23_01392 PF05198 Translation initiation factor IF-3, N-terminal domain CHY23_01393 PF01632 Ribosomal protein L35 CHY23_01394 PF00453 Ribosomal protein L20 CHY23_01398 PF13333 Integrase core domain CHY23_01398 PF00665 Integrase core domain CHY23_01399 PF03471 Transporter associated domain CHY23_01399 PF01595 Cyclin M transmembrane N-terminal domain CHY23_01399 PF00571 CBS domain CHY23_01400 PF00849 RNA pseudouridylate synthase CHY23_01401 PF00300 Histidine phosphatase superfamily (branch 1) CHY23_01402 PF03652 Holliday junction resolvase CHY23_01403 PF02622 Uncharacterized ACR, COG1678 CHY23_01404 PF04452 RNA methyltransferase CHY23_01406 PF01722 BolA-like protein CHY23_01411 PF07517 SecA DEAD-like domain CHY23_01411 PF07516 SecA Wing and Scaffold domain CHY23_01411 PF02810 SEC-C motif CHY23_01411 PF01043 SecA preprotein cross-linking domain CHY23_01413 PF00293 NUDIX domain CHY23_01414 PF01118 Semialdehyde dehydrogenase, NAD binding domain CHY23_01415 PF00696 Amino acid kinase family CHY23_01416 PF00202 Aminotransferase class-III CHY23_01420 PF07498 Rho termination factor, N-terminal domain CHY23_01420 PF07497 Rho termination factor, RNA-binding domain CHY23_01420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHY23_01421 PF00291 Pyridoxal-phosphate dependent enzyme CHY23_01422 PF08544 GHMP kinases C terminal CHY23_01422 PF00288 GHMP kinases N terminal domain CHY23_01423 PF00742 Homoserine dehydrogenase CHY23_01423 PF03447 Homoserine dehydrogenase, NAD binding domain CHY23_01423 PF13840 ACT domain CHY23_01423 PF00696 Amino acid kinase family CHY23_01423 PF01842 ACT domain CHY23_01424 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CHY23_01424 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CHY23_01425 PF00842 Alanine racemase, C-terminal domain CHY23_01425 PF01168 Alanine racemase, N-terminal domain CHY23_01426 PF13538 UvrD-like helicase C-terminal domain CHY23_01432 PF01546 Peptidase family M20/M25/M40 CHY23_01432 PF07687 Peptidase dimerisation domain CHY23_01433 PF00156 Phosphoribosyl transferase domain CHY23_01434 PF00625 Guanylate kinase CHY23_01435 PF02321 Outer membrane efflux protein CHY23_01436 PF03658 RnfH family Ubiquitin CHY23_01437 PF03364 Polyketide cyclase / dehydrase and lipid transport CHY23_01438 PF00005 ABC transporter CHY23_01438 PF03459 TOBE domain CHY23_01439 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01441 PF01061 ABC-2 type transporter CHY23_01442 PF00005 ABC transporter CHY23_01443 PF12170 DNA polymerase III tau subunit V interacting with alpha CHY23_01443 PF12169 DNA polymerase III subunits gamma and tau domain III CHY23_01444 PF00156 Phosphoribosyl transferase domain CHY23_01446 PF01042 Endoribonuclease L-PSP CHY23_01447 PF00291 Pyridoxal-phosphate dependent enzyme CHY23_01448 PF04073 Aminoacyl-tRNA editing domain CHY23_01449 PF00005 ABC transporter CHY23_01450 PF01297 Zinc-uptake complex component A periplasmic CHY23_01451 PF04358 DsrC like protein CHY23_01452 PF01027 Inhibitor of apoptosis-promoting Bax1 CHY23_01453 PF01066 CDP-alcohol phosphatidyltransferase CHY23_01455 PF02151 UvrB/uvrC motif CHY23_01455 PF08459 UvrC Helix-hairpin-helix N-terminal CHY23_01455 PF01541 GIY-YIG catalytic domain CHY23_01456 PF01026 TatD related DNase CHY23_01457 PF13361 UvrD-like helicase C-terminal domain CHY23_01457 PF00580 UvrD/REP helicase N-terminal domain CHY23_01458 PF08402 TOBE domain CHY23_01458 PF00005 ABC transporter CHY23_01459 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01460 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01461 PF07499 RuvA, C-terminal domain CHY23_01461 PF01330 RuvA N terminal domain CHY23_01462 PF17864 RuvB AAA lid domain CHY23_01462 PF05491 RuvB C-terminal winged helix domain CHY23_01462 PF05496 Holliday junction DNA helicase RuvB P-loop domain CHY23_01464 PF00521 DNA gyrase/topoisomerase IV, subunit A CHY23_01464 PF03989 DNA gyrase C-terminal domain, beta-propeller CHY23_01465 PF12161 HsdM N-terminal domain CHY23_01465 PF02384 N-6 DNA Methylase CHY23_01466 PF02384 N-6 DNA Methylase CHY23_01466 PF12161 HsdM N-terminal domain CHY23_01469 PF01420 Type I restriction modification DNA specificity domain CHY23_01472 PF18766 SWI2/SNF2 ATPase CHY23_01472 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CHY23_01472 PF12008 Type I restriction and modification enzyme - subunit R C terminal CHY23_01474 PF00899 ThiF family CHY23_01475 PF17274 Family of unknown function (DUF5339) CHY23_01476 PF01654 Cytochrome bd terminal oxidase subunit I CHY23_01477 PF02322 Cytochrome bd terminal oxidase subunit II CHY23_01480 PF03061 Thioesterase superfamily CHY23_01481 PF01618 MotA/TolQ/ExbB proton channel family CHY23_01482 PF02472 Biopolymer transport protein ExbD/TolR CHY23_01483 PF06519 TolA C-terminal CHY23_01483 PF06519 TolA C-terminal CHY23_01484 PF04052 TolB amino-terminal domain CHY23_01484 PF07676 WD40-like Beta Propeller Repeat CHY23_01485 PF00691 OmpA family CHY23_01487 PF00226 DnaJ domain CHY23_01487 PF05099 Tellurite resistance protein TerB CHY23_01488 PF01207 Dihydrouridine synthase (Dus) CHY23_01489 PF05128 Domain of unknown function (DUF697) CHY23_01493 PF00994 Probable molybdopterin binding domain CHY23_01493 PF03454 MoeA C-terminal region (domain IV) CHY23_01493 PF03453 MoeA N-terminal region (domain I and II) CHY23_01494 PF00899 ThiF family CHY23_01496 PF05958 tRNA (Uracil-5-)-methyltransferase CHY23_01496 PF01938 TRAM domain CHY23_01497 PF13286 Phosphohydrolase-associated domain CHY23_01497 PF01966 HD domain CHY23_01498 PF18339 RapA N-terminal Tudor like domain 1 CHY23_01498 PF18337 RapA N-terminal Tudor like domain CHY23_01498 PF00176 SNF2 family N-terminal domain CHY23_01498 PF12137 RNA polymerase recycling family C-terminal CHY23_01498 PF00271 Helicase conserved C-terminal domain CHY23_01499 PF00849 RNA pseudouridylate synthase CHY23_01500 PF01510 N-acetylmuramoyl-L-alanine amidase CHY23_01501 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CHY23_01502 PF00156 Phosphoribosyl transferase domain CHY23_01503 PF01717 Cobalamin-independent synthase, Catalytic domain CHY23_01504 PF01053 Cys/Met metabolism PLP-dependent enzyme CHY23_01505 PF02600 Disulfide bond formation protein DsbB CHY23_01506 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CHY23_01507 PF00392 Bacterial regulatory proteins, gntR family CHY23_01507 PF07840 FadR C-terminal domain CHY23_01508 PF02562 PhoH-like protein CHY23_01509 PF00665 Integrase core domain CHY23_01509 PF13333 Integrase core domain CHY23_01512 PF00472 RF-1 domain CHY23_01512 PF03462 PCRF domain CHY23_01518 PF02146 Sir2 family CHY23_01522 PF00586 AIR synthase related protein, N-terminal domain CHY23_01522 PF02769 AIR synthase related protein, C-terminal domain CHY23_01523 PF00293 NUDIX domain CHY23_01524 PF01494 FAD binding domain CHY23_01528 PF01494 FAD binding domain CHY23_01529 PF03668 P-loop ATPase protein family CHY23_01530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CHY23_01531 PF00005 ABC transporter CHY23_01531 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHY23_01532 PF03968 OstA-like protein CHY23_01534 PF00311 Phosphoenolpyruvate carboxylase CHY23_01535 PF04536 TPM domain CHY23_01537 PF04011 LemA family CHY23_01539 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CHY23_01540 PF00294 pfkB family carbohydrate kinase CHY23_01541 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CHY23_01541 PF00381 PTS HPr component phosphorylation site CHY23_01542 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CHY23_01542 PF00128 Alpha amylase, catalytic domain CHY23_01542 PF02806 Alpha amylase, C-terminal all-beta domain CHY23_01543 PF00128 Alpha amylase, catalytic domain CHY23_01543 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CHY23_01543 PF18390 Glycogen debranching enzyme C-terminal domain CHY23_01544 PF00483 Nucleotidyl transferase CHY23_01545 PF08323 Starch synthase catalytic domain CHY23_01545 PF00534 Glycosyl transferases group 1 CHY23_01546 PF00343 Carbohydrate phosphorylase CHY23_01548 PF00334 Nucleoside diphosphate kinase CHY23_01549 PF09334 tRNA synthetases class I (M) CHY23_01549 PF08264 Anticodon-binding domain of tRNA CHY23_01549 PF01588 Putative tRNA binding domain CHY23_01550 PF13378 Enolase C-terminal domain-like CHY23_01552 PF01479 S4 domain CHY23_01552 PF00849 RNA pseudouridylate synthase CHY23_01553 PF07690 Major Facilitator Superfamily CHY23_01556 PF01261 Xylose isomerase-like TIM barrel CHY23_01557 PF00877 NlpC/P60 family CHY23_01558 PF00717 Peptidase S24-like CHY23_01559 PF01228 Glycine radical CHY23_01560 PF03167 Uracil DNA glycosylase superfamily CHY23_01561 PF04393 Protein of unknown function (DUF535) CHY23_01562 PF00082 Subtilase family CHY23_01562 PF03797 Autotransporter beta-domain CHY23_01563 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CHY23_01563 PF00271 Helicase conserved C-terminal domain CHY23_01563 PF04408 Helicase associated domain (HA2) CHY23_01563 PF11898 Domain of unknown function (DUF3418) CHY23_01563 PF00270 DEAD/DEAH box helicase CHY23_01564 PF04284 Protein of unknown function (DUF441) CHY23_01565 PF01025 GrpE CHY23_01566 PF13416 Bacterial extracellular solute-binding protein CHY23_01567 PF01554 MatE CHY23_01568 PF00580 UvrD/REP helicase N-terminal domain CHY23_01568 PF13361 UvrD-like helicase C-terminal domain CHY23_01568 PF12705 PD-(D/E)XK nuclease superfamily CHY23_01569 PF00795 Carbon-nitrogen hydrolase CHY23_01570 PF03471 Transporter associated domain CHY23_01570 PF00571 CBS domain CHY23_01571 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CHY23_01572 PF00230 Major intrinsic protein CHY23_01573 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHY23_01573 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHY23_01574 PF05362 Lon protease (S16) C-terminal proteolytic domain CHY23_01574 PF00004 ATPase family associated with various cellular activities (AAA) CHY23_01574 PF02190 ATP-dependent protease La (LON) substrate-binding domain CHY23_01575 PF07690 Major Facilitator Superfamily CHY23_01576 PF03009 Glycerophosphoryl diester phosphodiesterase family CHY23_01577 PF01266 FAD dependent oxidoreductase CHY23_01577 PF04324 BFD-like [2Fe-2S] binding domain CHY23_01578 PF00890 FAD binding domain CHY23_01579 PF02754 Cysteine-rich domain CHY23_01579 PF13183 4Fe-4S dicluster domain CHY23_01580 PF01872 RibD C-terminal domain CHY23_01580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHY23_01581 PF00677 Lumazine binding domain CHY23_01582 PF00925 GTP cyclohydrolase II CHY23_01582 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CHY23_01583 PF00885 6,7-dimethyl-8-ribityllumazine synthase CHY23_01584 PF03449 Transcription elongation factor, N-terminal CHY23_01584 PF01272 Transcription elongation factor, GreA/GreB, C-term CHY23_01585 PF01380 SIS domain CHY23_01585 PF00571 CBS domain CHY23_01586 PF00883 Cytosol aminopeptidase family, catalytic domain CHY23_01586 PF12404 Peptidase CHY23_01587 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CHY23_01588 PF01758 Sodium Bile acid symporter family CHY23_01589 PF13533 Biotin-lipoyl like CHY23_01591 PF08502 LeuA allosteric (dimerisation) domain CHY23_01591 PF00682 HMGL-like CHY23_01592 PF08281 Sigma-70, region 4 CHY23_01592 PF04542 Sigma-70 region 2 CHY23_01593 PF03873 Anti sigma-E protein RseA, C-terminal domain CHY23_01593 PF03872 Anti sigma-E protein RseA, N-terminal domain CHY23_01595 PF13193 AMP-binding enzyme C-terminal domain CHY23_01595 PF00501 AMP-binding enzyme CHY23_01597 PF00398 Ribosomal RNA adenine dimethylase CHY23_01598 PF00639 PPIC-type PPIASE domain CHY23_01598 PF09312 SurA N-terminal domain CHY23_01599 PF00156 Phosphoribosyl transferase domain CHY23_01600 PF01467 Cytidylyltransferase-like CHY23_01600 PF00294 pfkB family carbohydrate kinase CHY23_01603 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CHY23_01603 PF01926 50S ribosome-binding GTPase CHY23_01604 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CHY23_01604 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CHY23_01604 PF01488 Shikimate / quinate 5-dehydrogenase CHY23_01605 PF13291 ACT domain CHY23_01605 PF04607 Region found in RelA / SpoT proteins CHY23_01605 PF02824 TGS domain CHY23_01606 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CHY23_01606 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CHY23_01606 PF13288 DXP reductoisomerase C-terminal domain CHY23_01607 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CHY23_01607 PF00132 Bacterial transferase hexapeptide (six repeats) CHY23_01608 PF07977 FabA-like domain CHY23_01609 PF00132 Bacterial transferase hexapeptide (six repeats) CHY23_01609 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CHY23_01611 PF01103 Surface antigen CHY23_01611 PF07244 Surface antigen variable number repeat CHY23_01612 PF02163 Peptidase family M50 CHY23_01614 PF01255 Putative undecaprenyl diphosphate synthase CHY23_01615 PF16123 Hydroxyacylglutathione hydrolase C-terminus CHY23_01615 PF00753 Metallo-beta-lactamase superfamily CHY23_01616 PF00480 ROK family CHY23_01617 PF01569 PAP2 superfamily CHY23_01618 PF01985 CRS1 / YhbY (CRM) domain CHY23_01619 PF00535 Glycosyl transferase family 2 CHY23_01620 PF00768 D-alanyl-D-alanine carboxypeptidase CHY23_01621 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CHY23_01622 PF00764 Arginosuccinate synthase CHY23_01623 PF00075 RNase H CHY23_01624 PF02674 Colicin V production protein CHY23_01625 PF00156 Phosphoribosyl transferase domain CHY23_01627 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHY23_01627 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHY23_01628 PF04355 SmpA / OmlA family CHY23_01629 PF04245 37-kD nucleoid-associated bacterial protein CHY23_01630 PF01042 Endoribonuclease L-PSP CHY23_01633 PF07119 Protein of unknown function (DUF1375) CHY23_01634 PF00180 Isocitrate/isopropylmalate dehydrogenase CHY23_01635 PF01641 SelR domain CHY23_01636 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CHY23_01636 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CHY23_01638 PF04085 rod shape-determining protein MreC CHY23_01639 PF04093 rod shape-determining protein MreD CHY23_01640 PF12002 MgsA AAA+ ATPase C terminal CHY23_01640 PF16193 AAA C-terminal domain CHY23_01640 PF00004 ATPase family associated with various cellular activities (AAA) CHY23_01641 PF00950 ABC 3 transport family CHY23_01642 PF13230 Glutamine amidotransferases class-II CHY23_01643 PF00561 alpha/beta hydrolase fold CHY23_01644 PF02698 DUF218 domain CHY23_01645 PF03895 YadA-like membrane anchor domain CHY23_01645 PF05658 Head domain of trimeric autotransporter adhesin CHY23_01645 PF05662 Coiled stalk of trimeric autotransporter adhesin CHY23_01645 PF13018 Extended Signal Peptide of Type V secretion system CHY23_01646 PF05662 Coiled stalk of trimeric autotransporter adhesin CHY23_01646 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin CHY23_01646 PF13018 Extended Signal Peptide of Type V secretion system CHY23_01646 PF03895 YadA-like membrane anchor domain CHY23_01648 PF02589 LUD domain CHY23_01649 PF02589 LUD domain CHY23_01649 PF13183 4Fe-4S dicluster domain CHY23_01649 PF11870 Domain of unknown function (DUF3390) CHY23_01650 PF02754 Cysteine-rich domain CHY23_01651 PF02652 L-lactate permease CHY23_01652 PF00816 H-NS histone family CHY23_01653 PF03553 Na+/H+ antiporter family CHY23_01654 PF13407 Periplasmic binding protein domain CHY23_01655 PF00549 CoA-ligase CHY23_01655 PF02629 CoA binding domain CHY23_01656 PF00549 CoA-ligase CHY23_01656 PF08442 ATP-grasp domain CHY23_01657 PF04393 Protein of unknown function (DUF535) CHY23_01658 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHY23_01658 PF00364 Biotin-requiring enzyme CHY23_01658 PF02817 e3 binding domain CHY23_01659 PF16870 2-oxoglutarate dehydrogenase C-terminal CHY23_01659 PF16078 2-oxoglutarate dehydrogenase N-terminus CHY23_01659 PF02779 Transketolase, pyrimidine binding domain CHY23_01659 PF00676 Dehydrogenase E1 component CHY23_01660 PF00005 ABC transporter CHY23_01661 PF04225 Opacity-associated protein A LysM-like domain CHY23_01661 PF01551 Peptidase family M23 CHY23_01662 PF10411 Disulfide bond isomerase protein N-terminus CHY23_01662 PF13098 Thioredoxin-like domain CHY23_01663 PF17768 RecJ OB domain CHY23_01663 PF01368 DHH family CHY23_01663 PF02272 DHHA1 domain CHY23_01664 PF00691 OmpA family CHY23_01664 PF01389 OmpA-like transmembrane domain CHY23_01666 PF07730 Histidine kinase CHY23_01666 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_01666 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CHY23_01666 PF00672 HAMP domain CHY23_01668 PF01725 Ham1 family CHY23_01669 PF01906 Putative heavy-metal-binding CHY23_01670 PF01268 Formate--tetrahydrofolate ligase CHY23_01671 PF03692 Putative zinc- or iron-chelating domain CHY23_01672 PF00106 short chain dehydrogenase CHY23_01673 PF00291 Pyridoxal-phosphate dependent enzyme CHY23_01674 PF00290 Tryptophan synthase alpha chain CHY23_01675 PF12441 CopG antitoxin of type II toxin-antitoxin system CHY23_01677 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CHY23_01677 PF00476 DNA polymerase family A CHY23_01677 PF01612 3'-5' exonuclease CHY23_01677 PF01367 5'-3' exonuclease, C-terminal SAM fold CHY23_01678 PF03548 Outer membrane lipoprotein carrier protein LolA CHY23_01679 PF01371 Trp repressor protein CHY23_01680 PF00912 Transglycosylase CHY23_01681 PF02627 Carboxymuconolactone decarboxylase family CHY23_01688 PF00881 Nitroreductase family CHY23_01689 PF08443 RimK-like ATP-grasp domain CHY23_01689 PF18030 RimK PreATP-grasp domain CHY23_01690 PF02698 DUF218 domain CHY23_01691 PF00390 Malic enzyme, N-terminal domain CHY23_01691 PF03949 Malic enzyme, NAD binding domain CHY23_01691 PF01515 Phosphate acetyl/butaryl transferase CHY23_01692 PF01386 Ribosomal L25p family CHY23_01707 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB CHY23_01709 PF01381 Helix-turn-helix CHY23_01711 PF02463 RecF/RecN/SMC N terminal domain CHY23_01712 PF00717 Peptidase S24-like CHY23_01718 PF06147 Protein of unknown function (DUF968) CHY23_01736 PF00574 Clp protease CHY23_01750 PF06226 Protein of unknown function (DUF1007) CHY23_01751 PF03824 High-affinity nickel-transport protein CHY23_01752 PF01235 Sodium:alanine symporter family CHY23_01753 PF00005 ABC transporter CHY23_01754 PF00005 ABC transporter CHY23_01755 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01756 PF00899 ThiF family CHY23_01757 PF05690 Thiazole biosynthesis protein ThiG CHY23_01758 PF06968 Biotin and Thiamin Synthesis associated domain CHY23_01758 PF04055 Radical SAM superfamily CHY23_01759 PF03070 TENA/THI-4/PQQC family CHY23_01760 PF09084 NMT1/THI5 like CHY23_01761 PF08543 Phosphomethylpyrimidine kinase CHY23_01762 PF08543 Phosphomethylpyrimidine kinase CHY23_01763 PF02581 Thiamine monophosphate synthase CHY23_01764 PF06421 GTP-binding protein LepA C-terminus CHY23_01764 PF03144 Elongation factor Tu domain 2 CHY23_01764 PF00009 Elongation factor Tu GTP binding domain CHY23_01764 PF00679 Elongation factor G C-terminus CHY23_01765 PF10502 Signal peptidase, peptidase S26 CHY23_01766 PF14622 Ribonuclease-III-like CHY23_01766 PF00035 Double-stranded RNA binding motif CHY23_01767 PF07650 KH domain CHY23_01767 PF01926 50S ribosome-binding GTPase CHY23_01768 PF02565 Recombination protein O C terminal CHY23_01768 PF11967 Recombination protein O N terminal CHY23_01775 PF00437 Type II/IV secretion system protein CHY23_01778 PF00263 Bacterial type II and III secretion system protein CHY23_01778 PF03958 Bacterial type II/III secretion system short domain CHY23_01783 PF00271 Helicase conserved C-terminal domain CHY23_01783 PF00270 DEAD/DEAH box helicase CHY23_01785 PF05872 Bacterial protein of unknown function (DUF853) CHY23_01787 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_01788 PF07715 TonB-dependent Receptor Plug Domain CHY23_01788 PF00593 TonB dependent receptor CHY23_01790 PF00005 ABC transporter CHY23_01790 PF06472 ABC transporter transmembrane region 2 CHY23_01791 PF06472 ABC transporter transmembrane region 2 CHY23_01791 PF00005 ABC transporter CHY23_01792 PF00318 Ribosomal protein S2 CHY23_01793 PF00889 Elongation factor TS CHY23_01794 PF00884 Sulfatase CHY23_01795 PF00696 Amino acid kinase family CHY23_01796 PF01765 Ribosome recycling factor CHY23_01797 PF00155 Aminotransferase class I and II CHY23_01797 PF00392 Bacterial regulatory proteins, gntR family CHY23_01798 PF01680 SOR/SNZ family CHY23_01799 PF01174 SNO glutamine amidotransferase family CHY23_01800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHY23_01801 PF03880 DbpA RNA binding domain CHY23_01801 PF00271 Helicase conserved C-terminal domain CHY23_01801 PF00270 DEAD/DEAH box helicase CHY23_01803 PF00013 KH domain CHY23_01803 PF00575 S1 RNA binding domain CHY23_01803 PF03725 3' exoribonuclease family, domain 2 CHY23_01803 PF01138 3' exoribonuclease family, domain 1 CHY23_01803 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CHY23_01804 PF03989 DNA gyrase C-terminal domain, beta-propeller CHY23_01804 PF00521 DNA gyrase/topoisomerase IV, subunit A CHY23_01805 PF03882 MukF winged-helix domain CHY23_01805 PF17193 MukF C-terminal domain CHY23_01805 PF17192 MukF middle domain CHY23_01806 PF04288 MukE-like family CHY23_01807 PF04310 MukB N-terminal CHY23_01807 PF16330 MukB hinge domain CHY23_01808 PF07690 Major Facilitator Superfamily CHY23_01809 PF00884 Sulfatase CHY23_01809 PF11893 Domain of unknown function (DUF3413) CHY23_01810 PF07208 Protein of unknown function (DUF1414) CHY23_01811 PF00440 Bacterial regulatory proteins, tetR family CHY23_01812 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CHY23_01813 PF00873 AcrB/AcrD/AcrF family CHY23_01814 PF00132 Bacterial transferase hexapeptide (six repeats) CHY23_01814 PF12804 MobA-like NTP transferase domain CHY23_01816 PF08942 Domain of unknown function (DUF1919) CHY23_01817 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHY23_01817 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHY23_01817 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHY23_01817 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHY23_01818 PF02540 NAD synthase CHY23_01818 PF00958 GMP synthase C terminal domain CHY23_01818 PF00117 Glutamine amidotransferase class-I CHY23_01820 PF00571 CBS domain CHY23_01820 PF00478 IMP dehydrogenase / GMP reductase domain CHY23_01821 PF00478 IMP dehydrogenase / GMP reductase domain CHY23_01821 PF00571 CBS domain CHY23_01822 PF01728 FtsJ-like methyltransferase CHY23_01823 PF06480 FtsH Extracellular CHY23_01823 PF01434 Peptidase family M41 CHY23_01823 PF17862 AAA+ lid domain CHY23_01823 PF00004 ATPase family associated with various cellular activities (AAA) CHY23_01824 PF03222 Tryptophan/tyrosine permease family CHY23_01825 PF03222 Tryptophan/tyrosine permease family CHY23_01826 PF08335 GlnD PII-uridylyltransferase CHY23_01826 PF01966 HD domain CHY23_01827 PF06295 Protein of unknown function (DUF1043) CHY23_01828 PF00572 Ribosomal protein L13 CHY23_01829 PF00380 Ribosomal protein S9/S16 CHY23_01830 PF03883 Peroxide stress protein YaaA CHY23_01832 PF01545 Cation efflux family CHY23_01832 PF16916 Dimerisation domain of Zinc Transporter CHY23_01833 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CHY23_01834 PF00375 Sodium:dicarboxylate symporter family CHY23_01835 PF00881 Nitroreductase family CHY23_01836 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CHY23_01836 PF01409 tRNA synthetases class II core domain (F) CHY23_01837 PF03147 Ferredoxin-fold anticodon binding domain CHY23_01837 PF03483 B3/4 domain CHY23_01837 PF03484 tRNA synthetase B5 domain CHY23_01837 PF01588 Putative tRNA binding domain CHY23_01837 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CHY23_01838 PF00216 Bacterial DNA-binding protein CHY23_01839 PF00877 NlpC/P60 family CHY23_01840 PF00665 Integrase core domain CHY23_01840 PF13333 Integrase core domain CHY23_01843 PF00480 ROK family CHY23_01843 PF01047 MarR family CHY23_01844 PF01612 3'-5' exonuclease CHY23_01844 PF00570 HRDC domain CHY23_01845 PF01037 Lrp/AsnC ligand binding domain CHY23_01846 PF01580 FtsK/SpoIIIE family CHY23_01846 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CHY23_01846 PF17854 FtsK alpha domain CHY23_01846 PF09397 Ftsk gamma domain CHY23_01847 PF04228 Putative neutral zinc metallopeptidase CHY23_01848 PF00793 DAHP synthetase I family CHY23_01849 PF00814 Glycoprotease family CHY23_01850 PF00265 Thymidine kinase CHY23_01851 PF06005 Cell division protein ZapB CHY23_01852 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CHY23_01853 PF01784 NIF3 (NGG1p interacting factor 3) CHY23_01854 PF00005 ABC transporter CHY23_01854 PF02687 FtsX-like permease family CHY23_01854 PF12704 MacB-like periplasmic core domain CHY23_01855 PF16527 Two-component sensor protein CpxA, periplasmic domain CHY23_01855 PF00672 HAMP domain CHY23_01855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_01855 PF00512 His Kinase A (phospho-acceptor) domain CHY23_01856 PF16527 Two-component sensor protein CpxA, periplasmic domain CHY23_01856 PF00672 HAMP domain CHY23_01856 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_01856 PF00512 His Kinase A (phospho-acceptor) domain CHY23_01857 PF00072 Response regulator receiver domain CHY23_01857 PF00486 Transcriptional regulatory protein, C terminal CHY23_01858 PF03819 MazG nucleotide pyrophosphohydrolase domain CHY23_01859 PF17848 Acetyl-coA carboxylase zinc finger domain CHY23_01859 PF01039 Carboxyl transferase domain CHY23_01860 PF08245 Mur ligase middle domain CHY23_01862 PF17384 RimP C-terminal SH3 domain CHY23_01862 PF02576 RimP N-terminal domain CHY23_01863 PF13184 NusA-like KH domain CHY23_01863 PF08529 NusA N-terminal domain CHY23_01863 PF00575 S1 RNA binding domain CHY23_01864 PF00009 Elongation factor Tu GTP binding domain CHY23_01864 PF11987 Translation-initiation factor 2 CHY23_01864 PF04760 Translation initiation factor IF-2, N-terminal region CHY23_01865 PF02033 Ribosome-binding factor A CHY23_01866 PF01509 TruB family pseudouridylate synthase (N terminal domain) CHY23_01866 PF16198 tRNA pseudouridylate synthase B C-terminal domain CHY23_01866 PF09157 Pseudouridine synthase II TruB, C-terminal CHY23_01867 PF13406 Transglycosylase SLT domain CHY23_01868 PF07411 Domain of unknown function (DUF1508) CHY23_01869 PF07085 DRTGG domain CHY23_01869 PF01515 Phosphate acetyl/butaryl transferase CHY23_01870 PF00871 Acetokinase family CHY23_01871 PF02872 5'-nucleotidase, C-terminal domain CHY23_01871 PF00149 Calcineurin-like phosphoesterase CHY23_01873 PF13609 Gram-negative porin CHY23_01875 PF00483 Nucleotidyl transferase CHY23_01876 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHY23_01876 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHY23_01876 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHY23_01876 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHY23_01877 PF02599 Global regulator protein family CHY23_01878 PF02272 DHHA1 domain CHY23_01878 PF01411 tRNA synthetases class II (A) CHY23_01878 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CHY23_01879 PF00582 Universal stress protein family CHY23_01880 PF00325 Bacterial regulatory proteins, crp family CHY23_01880 PF00027 Cyclic nucleotide-binding domain CHY23_01881 PF04386 Stringent starvation protein B CHY23_01882 PF00043 Glutathione S-transferase, C-terminal domain CHY23_01882 PF02798 Glutathione S-transferase, N-terminal domain CHY23_01883 PF00731 AIR carboxylase CHY23_01884 PF00710 Asparaginase, N-terminal CHY23_01884 PF17763 Glutaminase/Asparaginase C-terminal domain CHY23_01885 PF02222 ATP-grasp domain CHY23_01885 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CHY23_01886 PF00155 Aminotransferase class I and II CHY23_01887 PF05195 Aminopeptidase P, N-terminal domain CHY23_01887 PF00557 Metallopeptidase family M24 CHY23_01890 PF00271 Helicase conserved C-terminal domain CHY23_01890 PF04851 Type III restriction enzyme, res subunit CHY23_01890 PF02151 UvrB/uvrC motif CHY23_01890 PF12344 Ultra-violet resistance protein B CHY23_01890 PF17757 UvrB interaction domain CHY23_01891 PF09375 Imelysin CHY23_01892 PF10518 TAT (twin-arginine translocation) pathway signal sequence CHY23_01892 PF04261 Dyp-type peroxidase family CHY23_01894 PF02811 PHP domain CHY23_01896 PF08411 Exonuclease C-terminal CHY23_01896 PF00929 Exonuclease CHY23_01897 PF00654 Voltage gated chloride channel CHY23_01899 PF01336 OB-fold nucleic acid binding domain CHY23_01899 PF00152 tRNA synthetases class II (D, K and N) CHY23_01900 PF04055 Radical SAM superfamily CHY23_01902 PF09285 Elongation factor P, C-terminal CHY23_01902 PF08207 Elongation factor P (EF-P) KOW-like domain CHY23_01902 PF01132 Elongation factor P (EF-P) OB domain CHY23_01903 PF00749 tRNA synthetases class I (E and Q), catalytic domain CHY23_01903 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CHY23_01905 PF07690 Major Facilitator Superfamily CHY23_01906 PF14718 Soluble lytic murein transglycosylase L domain CHY23_01906 PF01464 Transglycosylase SLT domain CHY23_01907 PF00156 Phosphoribosyl transferase domain CHY23_01908 PF01053 Cys/Met metabolism PLP-dependent enzyme CHY23_01909 PF01113 Dihydrodipicolinate reductase, N-terminus CHY23_01909 PF05173 Dihydrodipicolinate reductase, C-terminus CHY23_01910 PF01728 FtsJ-like methyltransferase CHY23_01910 PF18125 RlmM ferredoxin-like domain CHY23_01912 PF04241 Protein of unknown function (DUF423) CHY23_01913 PF01565 FAD binding domain CHY23_01913 PF09330 D-lactate dehydrogenase, membrane binding CHY23_01914 PF01568 Molydopterin dinucleotide binding domain CHY23_01914 PF18364 Molybdopterin oxidoreductase N-terminal domain CHY23_01914 PF00384 Molybdopterin oxidoreductase CHY23_01915 PF03264 NapC/NirT cytochrome c family, N-terminal region CHY23_01916 PF04055 Radical SAM superfamily CHY23_01916 PF06463 Molybdenum Cofactor Synthesis C CHY23_01917 PF01967 MoaC family CHY23_01918 PF02597 ThiS family CHY23_01919 PF02391 MoaE protein CHY23_01920 PF02130 Uncharacterized protein family UPF0054 CHY23_01921 PF17176 tRNA-binding domain CHY23_01921 PF05127 Helicase CHY23_01921 PF13718 GNAT acetyltransferase 2 CHY23_01922 PF01396 Topoisomerase DNA binding C4 zinc finger CHY23_01922 PF01131 DNA topoisomerase CHY23_01922 PF01751 Toprim domain CHY23_01922 PF08272 Topoisomerase I zinc-ribbon-like CHY23_01923 PF03466 LysR substrate binding domain CHY23_01923 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_01924 PF00583 Acetyltransferase (GNAT) family CHY23_01924 PF00696 Amino acid kinase family CHY23_01925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CHY23_01926 PF00155 Aminotransferase class I and II CHY23_01927 PF01053 Cys/Met metabolism PLP-dependent enzyme CHY23_01928 PF00266 Aminotransferase class-V CHY23_01929 PF00271 Helicase conserved C-terminal domain CHY23_01929 PF00176 SNF2 family N-terminal domain CHY23_01931 PF01555 DNA methylase CHY23_01932 PF01418 Helix-turn-helix domain, rpiR family CHY23_01932 PF01380 SIS domain CHY23_01933 PF04074 YhcH/YjgK/YiaL CHY23_01934 PF02541 Ppx/GppA phosphatase family CHY23_01935 PF04363 Protein of unknown function (DUF496) CHY23_01936 PF00696 Amino acid kinase family CHY23_01936 PF01842 ACT domain CHY23_01937 PF03477 ATP cone domain CHY23_01938 PF05166 YcgL domain CHY23_01939 PF00772 DnaB-like helicase N terminal domain CHY23_01939 PF03796 DnaB-like helicase C terminal domain CHY23_01940 PF01497 Periplasmic binding protein CHY23_01941 PF01032 FecCD transport family CHY23_01942 PF01032 FecCD transport family CHY23_01943 PF00005 ABC transporter CHY23_01944 PF01865 Protein of unknown function DUF47 CHY23_01945 PF01384 Phosphate transporter family CHY23_01946 PF08239 Bacterial SH3 domain CHY23_01948 PF01814 Hemerythrin HHE cation binding domain CHY23_01949 PF01702 Queuine tRNA-ribosyltransferase CHY23_01952 PF00313 'Cold-shock' DNA-binding domain CHY23_01953 PF00484 Carbonic anhydrase CHY23_01954 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHY23_01954 PF00205 Thiamine pyrophosphate enzyme, central domain CHY23_01954 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHY23_01955 PF10369 Small subunit of acetolactate synthase CHY23_01956 PF01523 Putative modulator of DNA gyrase CHY23_01957 PF04751 Protein of unknown function (DUF615) CHY23_01958 PF04247 Invasion gene expression up-regulator, SirB CHY23_01959 PF02441 Flavoprotein CHY23_01960 PF04474 Protein of unknown function (DUF554) CHY23_01962 PF01253 Translation initiation factor SUI1 CHY23_01963 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CHY23_01964 PF18073 Rubredoxin metal binding domain CHY23_01965 PF06305 Lipopolysaccharide assembly protein A domain CHY23_01966 PF00216 Bacterial DNA-binding protein CHY23_01967 PF00575 S1 RNA binding domain CHY23_01968 PF02224 Cytidylate kinase CHY23_01969 PF13180 PDZ domain CHY23_01971 PF03840 Preprotein translocase SecG subunit CHY23_01972 PF01131 DNA topoisomerase CHY23_01972 PF01751 Toprim domain CHY23_01973 PF00245 Alkaline phosphatase CHY23_01974 PF03411 Penicillin-insensitive murein endopeptidase CHY23_01975 PF01264 Chorismate synthase CHY23_01976 PF12794 Mechanosensitive ion channel inner membrane domain 1 CHY23_01976 PF12795 Mechanosensitive ion channel porin domain CHY23_01976 PF00924 Mechanosensitive ion channel CHY23_01977 PF00924 Mechanosensitive ion channel CHY23_01977 PF12794 Mechanosensitive ion channel inner membrane domain 1 CHY23_01977 PF12795 Mechanosensitive ion channel porin domain CHY23_01978 PF00501 AMP-binding enzyme CHY23_01979 PF17206 SeqA protein N-terminal domain CHY23_01979 PF03925 SeqA protein C-terminal domain CHY23_01980 PF00561 alpha/beta hydrolase fold CHY23_01981 PF13649 Methyltransferase domain CHY23_01985 PF08206 Ribonuclease B OB domain CHY23_01985 PF00773 RNB domain CHY23_01985 PF00575 S1 RNA binding domain CHY23_01986 PF03788 LrgA family CHY23_01987 PF04172 LrgB-like family CHY23_01988 PF00149 Calcineurin-like phosphoesterase CHY23_01990 PF03889 Alternative ribosome-rescue factor A CHY23_01991 PF13649 Methyltransferase domain CHY23_01992 PF01594 AI-2E family transporter CHY23_01993 PF01933 Uncharacterised protein family UPF0052 CHY23_01994 PF02547 Queuosine biosynthesis protein CHY23_01995 PF03772 Competence protein CHY23_01995 PF13567 Domain of unknown function (DUF4131) CHY23_01995 PF00753 Metallo-beta-lactamase superfamily CHY23_01996 PF00375 Sodium:dicarboxylate symporter family CHY23_01997 PF01219 Prokaryotic diacylglycerol kinase CHY23_01998 PF02872 5'-nucleotidase, C-terminal domain CHY23_01998 PF00149 Calcineurin-like phosphoesterase CHY23_02003 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHY23_02003 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHY23_02004 PF02817 e3 binding domain CHY23_02004 PF00364 Biotin-requiring enzyme CHY23_02004 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHY23_02005 PF00456 Transketolase, thiamine diphosphate binding domain CHY23_02005 PF17831 Pyruvate dehydrogenase E1 component middle domain CHY23_02006 PF01180 Dihydroorotate dehydrogenase CHY23_02007 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CHY23_02007 PF14572 Phosphoribosyl synthetase-associated domain CHY23_02008 PF08544 GHMP kinases C terminal CHY23_02008 PF00288 GHMP kinases N terminal domain CHY23_02009 PF03550 Outer membrane lipoprotein LolB CHY23_02010 PF00005 ABC transporter CHY23_02010 PF00664 ABC transporter transmembrane region CHY23_02011 PF04172 LrgB-like family CHY23_02013 PF06733 DEAD_2 CHY23_02013 PF13307 Helicase C-terminal domain CHY23_02015 PF17755 UvrA DNA-binding domain CHY23_02015 PF17760 UvrA interaction domain CHY23_02016 PF00436 Single-strand binding protein family CHY23_02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_02020 PF03466 LysR substrate binding domain CHY23_02021 PF03060 Nitronate monooxygenase CHY23_02024 PF04237 YjbR CHY23_02025 PF00005 ABC transporter CHY23_02025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHY23_02026 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_02026 PF12911 N-terminal TM domain of oligopeptide transport permease C CHY23_02027 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_02028 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHY23_02029 PF18024 Helix-turn-helix domain CHY23_02029 PF00158 Sigma-54 interaction domain CHY23_02030 PF13580 SIS domain CHY23_02031 PF01293 Phosphoenolpyruvate carboxykinase CHY23_02032 PF04977 Septum formation initiator CHY23_02033 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CHY23_02034 PF02542 YgbB family CHY23_02035 PF00884 Sulfatase CHY23_02036 PF00111 2Fe-2S iron-sulfur cluster binding domain CHY23_02036 PF03476 MOSC N-terminal beta barrel domain CHY23_02036 PF03473 MOSC domain CHY23_02037 PF02609 Exonuclease VII small subunit CHY23_02038 PF00348 Polyprenyl synthetase CHY23_02040 PF01336 OB-fold nucleic acid binding domain CHY23_02040 PF00152 tRNA synthetases class II (D, K and N) CHY23_02041 PF10150 Ribonuclease E/G family CHY23_02041 PF00575 S1 RNA binding domain CHY23_02042 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CHY23_02042 PF18381 YcaO cyclodehydratase C-terminal domain CHY23_02043 PF04851 Type III restriction enzyme, res subunit CHY23_02043 PF08774 VRR-NUC domain CHY23_02044 PF04851 Type III restriction enzyme, res subunit CHY23_02044 PF08774 VRR-NUC domain CHY23_02047 PF01555 DNA methylase CHY23_02047 PF18273 Type III R-M EcoP15I C-terminal domain CHY23_02048 PF08003 Protein of unknown function (DUF1698) CHY23_02050 PF03562 MltA specific insert domain CHY23_02050 PF06725 3D domain CHY23_02052 PF13742 OB-fold nucleic acid binding domain CHY23_02052 PF02601 Exonuclease VII, large subunit CHY23_02054 PF00576 HIUase/Transthyretin family CHY23_02055 PF00356 Bacterial regulatory proteins, lacI family CHY23_02055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CHY23_02056 PF09335 SNARE associated Golgi protein CHY23_02057 PF00204 DNA gyrase B CHY23_02057 PF00986 DNA gyrase B subunit, carboxyl terminus CHY23_02057 PF18053 DNA gyrase B subunit insert domain CHY23_02057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_02057 PF01751 Toprim domain CHY23_02058 PF01040 UbiA prenyltransferase family CHY23_02059 PF00455 DeoR C terminal sensor domain CHY23_02059 PF08220 DeoR-like helix-turn-helix domain CHY23_02060 PF08328 Adenylosuccinate lyase C-terminal CHY23_02060 PF00206 Lyase CHY23_02061 PF04356 Protein of unknown function (DUF489) CHY23_02062 PF00005 ABC transporter CHY23_02062 PF00664 ABC transporter transmembrane region CHY23_02063 PF00664 ABC transporter transmembrane region CHY23_02063 PF00005 ABC transporter CHY23_02064 PF04357 TamB, inner membrane protein subunit of TAM complex CHY23_02065 PF17243 POTRA domain TamA domain 1 CHY23_02065 PF01103 Surface antigen CHY23_02066 PF04748 Divergent polysaccharide deacetylase CHY23_02067 PF01551 Peptidase family M23 CHY23_02068 PF00300 Histidine phosphatase superfamily (branch 1) CHY23_02070 PF00485 Phosphoribulokinase / Uridine kinase family CHY23_02071 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) CHY23_02072 PF14278 Transcriptional regulator C-terminal region CHY23_02072 PF00440 Bacterial regulatory proteins, tetR family CHY23_02073 PF13533 Biotin-lipoyl like CHY23_02074 PF00005 ABC transporter CHY23_02076 PF02321 Outer membrane efflux protein CHY23_02077 PF02233 NAD(P) transhydrogenase beta subunit CHY23_02078 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CHY23_02078 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHY23_02078 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHY23_02079 PF00588 SpoU rRNA Methylase family CHY23_02080 PF14489 QueF-like protein CHY23_02080 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CHY23_02082 PF00578 AhpC/TSA family CHY23_02083 PF04055 Radical SAM superfamily CHY23_02083 PF06969 HemN C-terminal domain CHY23_02084 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHY23_02085 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_02086 PF00005 ABC transporter CHY23_02086 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHY23_02087 PF00005 ABC transporter CHY23_02087 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHY23_02088 PF00890 FAD binding domain CHY23_02089 PF01717 Cobalamin-independent synthase, Catalytic domain CHY23_02090 PF02219 Methylenetetrahydrofolate reductase CHY23_02092 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHY23_02094 PF03222 Tryptophan/tyrosine permease family CHY23_02095 PF03315 Serine dehydratase beta chain CHY23_02095 PF03313 Serine dehydratase alpha chain CHY23_02096 PF01266 FAD dependent oxidoreductase CHY23_02096 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CHY23_02097 PF00218 Indole-3-glycerol phosphate synthase CHY23_02097 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CHY23_02098 PF02661 Fic/DOC family CHY23_02098 PF12728 Helix-turn-helix domain CHY23_02099 PF04287 tRNA pseudouridine synthase C CHY23_02100 PF00849 RNA pseudouridylate synthase CHY23_02101 PF03701 Uncharacterised protein family (UPF0181) CHY23_02103 PF01928 CYTH domain CHY23_02104 PF04317 YcjX-like family, DUF463 CHY23_02105 PF01668 SmpB protein CHY23_02106 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHY23_02106 PF02403 Seryl-tRNA synthetase N-terminal domain CHY23_02107 PF07687 Peptidase dimerisation domain CHY23_02107 PF01546 Peptidase family M20/M25/M40 CHY23_02108 PF03606 C4-dicarboxylate anaerobic carrier CHY23_02109 PF03575 Peptidase family S51 CHY23_02110 PF00133 tRNA synthetases class I (I, L, M and V) CHY23_02110 PF13603 Leucyl-tRNA synthetase, Domain 2 CHY23_02110 PF08264 Anticodon-binding domain of tRNA CHY23_02111 PF04390 Lipopolysaccharide-assembly CHY23_02112 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CHY23_02112 PF06144 DNA polymerase III, delta subunit CHY23_02113 PF03884 DNA gyrase inhibitor YacG CHY23_02114 PF01121 Dephospho-CoA kinase CHY23_02116 PF00482 Type II secretion system (T2SS), protein F CHY23_02117 PF00437 Type II/IV secretion system protein CHY23_02117 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CHY23_02118 PF07963 Prokaryotic N-terminal methylation motif CHY23_02119 PF18073 Rubredoxin metal binding domain CHY23_02121 PF00186 Dihydrofolate reductase CHY23_02122 PF01472 PUA domain CHY23_02122 PF00696 Amino acid kinase family CHY23_02123 PF01925 Sulfite exporter TauE/SafE CHY23_02124 PF10576 Iron-sulfur binding domain of endonuclease III CHY23_02124 PF00633 Helix-hairpin-helix motif CHY23_02124 PF00730 HhH-GPD superfamily base excision DNA repair protein CHY23_02125 PF02803 Thiolase, C-terminal domain CHY23_02125 PF00108 Thiolase, N-terminal domain CHY23_02126 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CHY23_02126 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CHY23_02126 PF00378 Enoyl-CoA hydratase/isomerase CHY23_02129 PF02634 FdhD/NarQ family CHY23_02130 PF01568 Molydopterin dinucleotide binding domain CHY23_02130 PF00384 Molybdopterin oxidoreductase CHY23_02130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHY23_02131 PF01568 Molydopterin dinucleotide binding domain CHY23_02131 PF00384 Molybdopterin oxidoreductase CHY23_02131 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHY23_02132 PF09163 Formate dehydrogenase N, transmembrane CHY23_02132 PF13247 4Fe-4S dicluster domain CHY23_02133 PF01292 Prokaryotic cytochrome b561 CHY23_02134 PF04216 Protein involved in formate dehydrogenase formation CHY23_02137 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CHY23_02137 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CHY23_02139 PF00701 Dihydrodipicolinate synthetase family CHY23_02140 PF03279 Bacterial lipid A biosynthesis acyltransferase CHY23_02141 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CHY23_02142 PF01416 tRNA pseudouridine synthase CHY23_02143 PF01227 GTP cyclohydrolase I CHY23_02146 PF12464 Maltose acetyltransferase CHY23_02146 PF14602 Hexapeptide repeat of succinyl-transferase CHY23_02147 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CHY23_02151 PF13693 Winged helix-turn-helix DNA-binding CHY23_02152 PF09039 Mu DNA binding, I gamma subdomain CHY23_02152 PF02914 Bacteriophage Mu transposase CHY23_02152 PF02316 Mu DNA-binding domain CHY23_02152 PF09299 Mu transposase, C-terminal CHY23_02153 PF13401 AAA domain CHY23_02153 PF09077 Mu B transposition protein, C terminal CHY23_02156 PF07352 Bacteriophage Mu Gam like protein CHY23_02163 PF06252 Protein of unknown function (DUF1018) CHY23_02165 PF08765 Mor transcription activator family CHY23_02166 PF01510 N-acetylmuramoyl-L-alanine amidase CHY23_02167 PF10841 Protein of unknown function (DUF2644) CHY23_02170 PF01258 Prokaryotic dksA/traR C4-type zinc finger CHY23_02171 PF10805 Protein of unknown function (DUF2730) CHY23_02172 PF08461 Ribonuclease R winged-helix domain CHY23_02173 PF11985 Protein of unknown function (DUF3486) CHY23_02174 PF03237 Terminase-like family CHY23_02175 PF06074 Protein of unknown function (DUF935) CHY23_02176 PF04233 Phage Mu protein F like protein CHY23_02177 PF05069 Phage virion morphogenesis family CHY23_02178 PF10123 Mu-like prophage I protein CHY23_02179 PF10124 Mu-like prophage major head subunit gpT CHY23_02180 PF17891 Mu-like prophage FluMu N-terminal domain CHY23_02180 PF12949 HeH/LEM domain CHY23_02181 PF07030 Protein of unknown function (DUF1320) CHY23_02182 PF08873 Domain of unknown function (DUF1834) CHY23_02195 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CHY23_02196 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_02196 PF03466 LysR substrate binding domain CHY23_02197 PF03180 NLPA lipoprotein CHY23_02198 PF03180 NLPA lipoprotein CHY23_02199 PF00528 Binding-protein-dependent transport system inner membrane component CHY23_02200 PF00005 ABC transporter CHY23_02200 PF09383 NIL domain CHY23_02201 PF09190 DALR domain CHY23_02201 PF01406 tRNA synthetases class I (C) catalytic domain CHY23_02202 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CHY23_02203 PF01966 HD domain CHY23_02203 PF01743 Poly A polymerase head domain CHY23_02203 PF12627 Probable RNA and SrmB- binding site of polymerase A CHY23_02205 PF00665 Integrase core domain CHY23_02205 PF13333 Integrase core domain CHY23_02206 PF07715 TonB-dependent Receptor Plug Domain CHY23_02206 PF00593 TonB dependent receptor CHY23_02209 PF04384 Iron-sulphur cluster assembly CHY23_02210 PF00111 2Fe-2S iron-sulfur cluster binding domain CHY23_02211 PF00012 Hsp70 protein CHY23_02212 PF10946 Protein of unknown function DUF2625 CHY23_02214 PF07743 HSCB C-terminal oligomerisation domain CHY23_02215 PF01521 Iron-sulphur cluster biosynthesis CHY23_02216 PF01592 NifU-like N terminal domain CHY23_02217 PF00266 Aminotransferase class-V CHY23_02218 PF02082 Transcriptional regulator CHY23_02219 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CHY23_02220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CHY23_02220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CHY23_02221 PF00989 PAS fold CHY23_02221 PF18415 Histidine kinase receptor ArcB trans-membrane domain CHY23_02221 PF01627 Hpt domain CHY23_02221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_02221 PF00512 His Kinase A (phospho-acceptor) domain CHY23_02221 PF00072 Response regulator receiver domain CHY23_02223 PF01713 Smr domain CHY23_02225 PF08241 Methyltransferase domain CHY23_02226 PF04301 Protein of unknown function (DUF452) CHY23_02227 PF00155 Aminotransferase class I and II CHY23_02228 PF00202 Aminotransferase class-III CHY23_02229 PF05175 Methyltransferase small domain CHY23_02230 PF01272 Transcription elongation factor, GreA/GreB, C-term CHY23_02230 PF03449 Transcription elongation factor, N-terminal CHY23_02231 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CHY23_02236 PF02382 N-terminal domain in RTX protein CHY23_02236 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CHY23_02236 PF08339 RTX C-terminal domain CHY23_02237 PF02794 RTX toxin acyltransferase family CHY23_02238 PF05127 Helicase CHY23_02238 PF13718 GNAT acetyltransferase 2 CHY23_02238 PF17176 tRNA-binding domain CHY23_02239 PF02142 MGS-like domain CHY23_02239 PF01808 AICARFT/IMPCHase bienzyme CHY23_02241 PF04829 Pre-toxin domain with VENN motif CHY23_02241 PF05860 haemagglutination activity domain CHY23_02241 PF13332 Hemagglutinin repeat CHY23_02242 PF13332 Hemagglutinin repeat CHY23_02242 PF13018 Extended Signal Peptide of Type V secretion system CHY23_02242 PF04829 Pre-toxin domain with VENN motif CHY23_02242 PF05860 haemagglutination activity domain CHY23_02243 PF17287 POTRA domain CHY23_02243 PF08479 POTRA domain, ShlB-type CHY23_02243 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CHY23_02244 PF04453 LPS transport system D CHY23_02244 PF03968 OstA-like protein CHY23_02245 PF04055 Radical SAM superfamily CHY23_02245 PF06969 HemN C-terminal domain CHY23_02247 PF04220 Der GTPase activator (YihI) CHY23_02248 PF06826 Predicted Permease Membrane Region CHY23_02248 PF02080 TrkA-C domain CHY23_02249 PF03616 Sodium/glutamate symporter CHY23_02250 PF06062 Uncharacterised protein family (UPF0231) CHY23_02251 PF03710 Glutamate-ammonia ligase adenylyltransferase CHY23_02251 PF08335 GlnD PII-uridylyltransferase CHY23_02252 PF03795 YCII-related domain CHY23_02253 PF03061 Thioesterase superfamily CHY23_02254 PF04279 Intracellular septation protein A CHY23_02256 PF04217 Protein of unknown function, DUF412 CHY23_02257 PF01171 PP-loop family CHY23_02258 PF13726 Na+-H+ antiporter family CHY23_02258 PF03553 Na+/H+ antiporter family CHY23_02259 PF03372 Endonuclease/Exonuclease/phosphatase family CHY23_02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_02260 PF03466 LysR substrate binding domain CHY23_02262 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CHY23_02265 PF01197 Ribosomal protein L31 CHY23_02266 PF02780 Transketolase, C-terminal domain CHY23_02266 PF00456 Transketolase, thiamine diphosphate binding domain CHY23_02266 PF02779 Transketolase, pyrimidine binding domain CHY23_02267 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHY23_02267 PF00183 Hsp90 protein CHY23_02268 PF00199 Catalase CHY23_02268 PF06628 Catalase-related immune-responsive CHY23_02270 PF13333 Integrase core domain CHY23_02270 PF00665 Integrase core domain CHY23_02271 PF00149 Calcineurin-like phosphoesterase CHY23_02272 PF00317 Ribonucleotide reductase, all-alpha domain CHY23_02272 PF03477 ATP cone domain CHY23_02272 PF02867 Ribonucleotide reductase, barrel domain CHY23_02274 PF00268 Ribonucleotide reductase, small chain CHY23_02275 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CHY23_02275 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CHY23_02276 PF10509 Galactokinase galactose-binding signature CHY23_02276 PF08544 GHMP kinases C terminal CHY23_02276 PF00288 GHMP kinases N terminal domain CHY23_02277 PF01263 Aldose 1-epimerase CHY23_02278 PF16353 Domain of unknown function(DUF4981) CHY23_02278 PF02929 Beta galactosidase small chain CHY23_02278 PF00703 Glycosyl hydrolases family 2 CHY23_02278 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CHY23_02278 PF02837 Glycosyl hydrolases family 2, sugar binding domain CHY23_02281 PF06594 Haemolysin-type calcium binding protein related domain CHY23_02281 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CHY23_02282 PF16793 RepB DNA-primase from phage plasmid CHY23_02282 PF03389 MobA/MobL family CHY23_02286 PF07690 Major Facilitator Superfamily CHY23_02287 PF03466 LysR substrate binding domain CHY23_02287 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHY23_02291 PF17511 Mobilization protein B