locus-tag class description D1103_00005 PF00308 Bacterial dnaA protein D1103_00005 PF08299 Bacterial dnaA protein helix-turn-helix D1103_00005 PF11638 DnaA N-terminal domain D1103_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1103_00010 PF02767 DNA polymerase III beta subunit, central domain D1103_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1103_00015 PF02463 RecF/RecN/SMC N terminal domain D1103_00020 PF00080 Copper/zinc superoxide dismutase (SODC) D1103_00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1103_00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1103_00035 PF02684 Lipid-A-disaccharide synthetase D1103_00040 PF01343 Peptidase family S49 D1103_00040 PF08496 Peptidase family S49 N-terminal D1103_00045 PF02381 MraZ protein, putative antitoxin-like D1103_00050 PF01795 MraW methylase family D1103_00055 PF04999 Cell division protein FtsL D1103_00060 PF00905 Penicillin binding protein transpeptidase domain D1103_00060 PF03717 Penicillin-binding Protein dimerisation domain D1103_00065 PF01225 Mur ligase family, catalytic domain D1103_00065 PF02875 Mur ligase family, glutamate ligase domain D1103_00065 PF08245 Mur ligase middle domain D1103_00070 PF01225 Mur ligase family, catalytic domain D1103_00070 PF02875 Mur ligase family, glutamate ligase domain D1103_00070 PF08245 Mur ligase middle domain D1103_00075 PF00953 Glycosyl transferase family 4 D1103_00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1103_00080 PF02875 Mur ligase family, glutamate ligase domain D1103_00080 PF08245 Mur ligase middle domain D1103_00085 PF01098 Cell cycle protein D1103_00090 PF04101 Glycosyltransferase family 28 C-terminal domain D1103_00090 PF03033 Glycosyltransferase family 28 N-terminal domain D1103_00095 PF01225 Mur ligase family, catalytic domain D1103_00095 PF02875 Mur ligase family, glutamate ligase domain D1103_00095 PF08245 Mur ligase middle domain D1103_00100 PF01820 D-ala D-ala ligase N-terminus D1103_00100 PF07478 D-ala D-ala ligase C-terminus D1103_00105 PF03799 Cell division protein FtsQ D1103_00105 PF08478 POTRA domain, FtsQ-type D1103_00110 PF02491 SHS2 domain inserted in FTSA D1103_00115 PF12327 FtsZ family, C-terminal domain D1103_00115 PF00091 Tubulin/FtsZ family, GTPase domain D1103_00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1103_00125 PF02463 RecF/RecN/SMC N terminal domain D1103_00130 PF00005 ABC transporter D1103_00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1103_00135 PF00528 Binding-protein-dependent transport system inner membrane component D1103_00135 PF12911 N-terminal TM domain of oligopeptide transport permease C D1103_00140 PF00528 Binding-protein-dependent transport system inner membrane component D1103_00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_00150 PF16658 Class II release factor RF3, C-terminal domain D1103_00150 PF03144 Elongation factor Tu domain 2 D1103_00150 PF00009 Elongation factor Tu GTP binding domain D1103_00165 PF01195 Peptidyl-tRNA hydrolase D1103_00170 PF01926 50S ribosome-binding GTPase D1103_00170 PF06071 Protein of unknown function (DUF933) D1103_00185 PF05433 Glycine zipper 2TM domain D1103_00190 PF06185 YecM protein D1103_00195 PF03485 Arginyl tRNA synthetase N terminal domain D1103_00195 PF05746 DALR anticodon binding domain D1103_00195 PF00750 tRNA synthetases class I (R) D1103_00200 PF01018 GTP1/OBG D1103_00200 PF01926 50S ribosome-binding GTPase D1103_00205 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) D1103_00210 PF00588 SpoU rRNA Methylase family D1103_00210 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1103_00215 PF13091 PLD-like domain D1103_00220 PF08264 Anticodon-binding domain of tRNA D1103_00220 PF00133 tRNA synthetases class I (I, L, M and V) D1103_00220 PF06827 Zinc finger found in FPG and IleRS D1103_00225 PF01687 Riboflavin kinase D1103_00225 PF06574 FAD synthetase D1103_00230 PF01467 Cytidylyltransferase-like D1103_00230 PF13521 AAA domain D1103_00235 PF00149 Calcineurin-like phosphoesterase D1103_00240 PF00072 Response regulator receiver domain D1103_00240 PF00486 Transcriptional regulatory protein, C terminal D1103_00255 PF01168 Alanine racemase, N-terminal domain D1103_00260 PF03144 Elongation factor Tu domain 2 D1103_00260 PF00679 Elongation factor G C-terminus D1103_00260 PF00009 Elongation factor Tu GTP binding domain D1103_00265 PF00462 Glutaredoxin D1103_00270 PF01138 3' exoribonuclease family, domain 1 D1103_00270 PF03725 3' exoribonuclease family, domain 2 D1103_00275 PF08340 Domain of unknown function (DUF1732) D1103_00275 PF03755 YicC-like family, N-terminal region D1103_00280 PF01571 Aminomethyltransferase folate-binding domain D1103_00285 PF00037 4Fe-4S binding domain D1103_00290 PF00196 Bacterial regulatory proteins, luxR family D1103_00290 PF00072 Response regulator receiver domain D1103_00295 PF01170 Putative RNA methylase family UPF0020 D1103_00295 PF02926 THUMP domain D1103_00295 PF10672 S-adenosylmethionine-dependent methyltransferase D1103_00300 PF00588 SpoU rRNA Methylase family D1103_00305 PF00923 Transaldolase/Fructose-6-phosphate aldolase D1103_00340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_00345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_00350 PF00528 Binding-protein-dependent transport system inner membrane component D1103_00355 PF00528 Binding-protein-dependent transport system inner membrane component D1103_00355 PF12911 N-terminal TM domain of oligopeptide transport permease C D1103_00360 PF00005 ABC transporter D1103_00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1103_00365 PF00005 ABC transporter D1103_00365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1103_00370 PF06146 Phosphate-starvation-inducible E D1103_00380 PF01042 Endoribonuclease L-PSP D1103_00385 PF01063 Amino-transferase class IV D1103_00390 PF00462 Glutaredoxin D1103_00395 PF13662 Toprim domain D1103_00395 PF02132 RecR protein D1103_00400 PF02575 YbaB/EbfC DNA-binding family D1103_00405 PF03544 Gram-negative bacterial TonB protein C-terminal D1103_00410 PF02472 Biopolymer transport protein ExbD/TolR D1103_00415 PF01618 MotA/TolQ/ExbB proton channel family D1103_00420 PF00581 Rhodanese-like domain D1103_00430 PF03610 PTS system fructose IIA component D1103_00430 PF05524 PEP-utilising enzyme, N-terminal D1103_00430 PF00391 PEP-utilising enzyme, mobile domain D1103_00430 PF00381 PTS HPr component phosphorylation site D1103_00435 PF02734 DAK2 domain D1103_00440 PF02733 Dak1 domain D1103_00445 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1103_00450 PF02348 Cytidylyltransferase D1103_00455 PF06078 Bacterial protein of unknown function (DUF937) D1103_00460 PF00293 NUDIX domain D1103_00460 PF09297 NADH pyrophosphatase zinc ribbon domain D1103_00465 PF00849 RNA pseudouridylate synthase D1103_00475 PF04186 FxsA cytoplasmic membrane protein D1103_00480 PF00557 Metallopeptidase family M24 D1103_00485 PF01206 Sulfurtransferase TusA D1103_00490 PF06877 Regulator of ribonuclease activity B D1103_00495 PF01926 50S ribosome-binding GTPase D1103_00505 PF02535 ZIP Zinc transporter D1103_00510 PF00920 Dehydratase family D1103_00520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1103_00520 PF00205 Thiamine pyrophosphate enzyme, central domain D1103_00520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1103_00525 PF02335 Cytochrome c552 D1103_00535 PF13247 4Fe-4S dicluster domain D1103_00540 PF03916 Polysulphide reductase, NrfD D1103_00555 PF00860 Permease family D1103_00560 PF00171 Aldehyde dehydrogenase family D1103_00560 PF01619 Proline dehydrogenase D1103_00560 PF14850 DNA-binding domain of Proline dehydrogenase D1103_00560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D1103_00565 PF00474 Sodium:solute symporter family D1103_00570 PF01614 Bacterial transcriptional regulator D1103_00570 PF09339 IclR helix-turn-helix domain D1103_00575 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1103_00585 PF05164 Cell division protein ZapA D1103_00590 PF03695 Uncharacterised protein family (UPF0149) D1103_00595 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1103_00600 PF04222 Protein of unknown function (DUF416) D1103_00605 PF00216 Bacterial DNA-binding protein D1103_00610 PF00303 Thymidylate synthase D1103_00620 PF06968 Biotin and Thiamin Synthesis associated domain D1103_00620 PF04055 Radical SAM superfamily D1103_00625 PF00313 'Cold-shock' DNA-binding domain D1103_00630 PF04352 ProQ/FINO family D1103_00635 PF11818 C-terminal domain of tail specific protease (DUF3340) D1103_00635 PF00595 PDZ domain D1103_00635 PF03572 Peptidase family S41 D1103_00635 PF17804 Tail specific protease N-terminal domain D1103_00640 PF03734 L,D-transpeptidase catalytic domain D1103_00645 PF05951 Bacterial protein of unknown function (DUF882) D1103_00650 PF00753 Metallo-beta-lactamase superfamily D1103_00665 PF01230 HIT domain D1103_00670 PF00950 ABC 3 transport family D1103_00675 PF00950 ABC 3 transport family D1103_00680 PF01351 Ribonuclease HII D1103_00685 PF03193 RsgA GTPase D1103_00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_00690 PF03466 LysR substrate binding domain D1103_00695 PF13419 Haloacid dehalogenase-like hydrolase D1103_00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_00700 PF03466 LysR substrate binding domain D1103_00710 PF17763 Glutaminase/Asparaginase C-terminal domain D1103_00710 PF00710 Asparaginase, N-terminal D1103_00715 PF06418 CTP synthase N-terminus D1103_00715 PF00117 Glutamine amidotransferase class-I D1103_00720 PF10063 Uncharacterized integral membrane protein (DUF2301) D1103_00725 PF00694 Aconitase C-terminal domain D1103_00730 PF00330 Aconitase family (aconitate hydratase) D1103_00735 PF05651 Putative sugar diacid recognition D1103_00735 PF17853 GGDEF-like domain D1103_00735 PF13556 PucR C-terminal helix-turn-helix domain D1103_00740 PF02447 GntP family permease D1103_00745 PF02595 Glycerate kinase family D1103_00750 PF00708 Acylphosphatase D1103_00755 PF11398 Protein of unknown function (DUF2813) D1103_00760 PF11892 Domain of unknown function (DUF3412) D1103_00760 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1103_00760 PF03641 Possible lysine decarboxylase D1103_00765 PF01207 Dihydrouridine synthase (Dus) D1103_00775 PF00317 Ribonucleotide reductase, all-alpha domain D1103_00775 PF02867 Ribonucleotide reductase, barrel domain D1103_00775 PF03477 ATP cone domain D1103_00780 PF01521 Iron-sulphur cluster biosynthesis D1103_00780 PF01106 NifU-like domain D1103_00785 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D1103_00785 PF11973 NQRA C-terminal domain D1103_00790 PF03116 NQR2, RnfD, RnfE family D1103_00795 PF04205 FMN-binding domain D1103_00800 PF02508 Rnf-Nqr subunit, membrane protein D1103_00805 PF02508 Rnf-Nqr subunit, membrane protein D1103_00810 PF00970 Oxidoreductase FAD-binding domain D1103_00810 PF00111 2Fe-2S iron-sulfur cluster binding domain D1103_00810 PF00175 Oxidoreductase NAD-binding domain D1103_00815 PF02424 ApbE family D1103_00820 PF04400 (Na+)-NQR maturation NqrM D1103_00830 PF12832 MFS_1 like family D1103_00835 PF03807 NADP oxidoreductase coenzyme F420-dependent D1103_00835 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1103_00840 PF04381 Putative exonuclease, RdgC D1103_00860 PF02508 Rnf-Nqr subunit, membrane protein D1103_00865 PF04060 Putative Fe-S cluster D1103_00870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1103_00870 PF12838 4Fe-4S dicluster domain D1103_00870 PF13375 RnfC Barrel sandwich hybrid domain D1103_00875 PF03458 UPF0126 domain D1103_00880 PF03116 NQR2, RnfD, RnfE family D1103_00885 PF04205 FMN-binding domain D1103_00890 PF02508 Rnf-Nqr subunit, membrane protein D1103_00895 PF03279 Bacterial lipid A biosynthesis acyltransferase D1103_00910 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1103_00915 PF01743 Poly A polymerase head domain D1103_00915 PF12626 Polymerase A arginine-rich C-terminus D1103_00915 PF12627 Probable RNA and SrmB- binding site of polymerase A D1103_00920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1103_00930 PF11739 Dicarboxylate transport D1103_00940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1103_00945 PF00929 Exonuclease D1103_00955 PF02153 Prephenate dehydrogenase D1103_00955 PF01817 Chorismate mutase type II D1103_00960 PF00793 DAHP synthetase I family D1103_00965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1103_00970 PF00224 Pyruvate kinase, barrel domain D1103_00970 PF02887 Pyruvate kinase, alpha/beta domain D1103_00975 PF00300 Histidine phosphatase superfamily (branch 1) D1103_00980 PF01207 Dihydrouridine synthase (Dus) D1103_00985 PF02954 Bacterial regulatory protein, Fis family D1103_00990 PF00209 Sodium:neurotransmitter symporter family D1103_00995 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1103_01000 PF01761 3-dehydroquinate synthase D1103_01005 PF01202 Shikimate kinase D1103_01010 PF17092 Penicillin-binding protein OB-like domain D1103_01010 PF00912 Transglycosylase D1103_01010 PF00905 Penicillin binding protein transpeptidase domain D1103_01015 PF11104 Type IV pilus assembly protein PilM; D1103_01035 PF03958 Bacterial type II/III secretion system short domain D1103_01035 PF00263 Bacterial type II and III secretion system protein D1103_01040 PF01029 NusB family D1103_01045 PF00586 AIR synthase related protein, N-terminal domain D1103_01045 PF02769 AIR synthase related protein, C-terminal domain D1103_01050 PF04608 Phosphatidylglycerophosphatase A D1103_01055 PF01810 LysE type translocator D1103_01060 PF00588 SpoU rRNA Methylase family D1103_01060 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1103_01065 PF00459 Inositol monophosphatase family D1103_01070 PF02780 Transketolase, C-terminal domain D1103_01070 PF02779 Transketolase, pyrimidine binding domain D1103_01070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1103_01080 PF00464 Serine hydroxymethyltransferase D1103_01085 PF01513 ATP-NAD kinase D1103_01090 PF18019 HD domain D1103_01095 PF01867 CRISPR associated protein Cas1 D1103_01105 PF09615 CRISPR-associated protein (Cas_Csy3) D1103_01110 PF09614 CRISPR-associated protein (Cas_Csy2) D1103_01120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1103_01120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1103_01120 PF02824 TGS domain D1103_01120 PF03129 Anticodon binding domain D1103_01140 PF00453 Ribosomal protein L20 D1103_01145 PF01632 Ribosomal protein L35 D1103_01150 PF00707 Translation initiation factor IF-3, C-terminal domain D1103_01150 PF05198 Translation initiation factor IF-3, N-terminal domain D1103_01155 PF05643 Putative bacterial lipoprotein (DUF799) D1103_01165 PF03783 Curli production assembly/transport component CsgG D1103_01180 PF01595 Cyclin M transmembrane N-terminal domain D1103_01180 PF03471 Transporter associated domain D1103_01180 PF00571 CBS domain D1103_01185 PF00849 RNA pseudouridylate synthase D1103_01190 PF00300 Histidine phosphatase superfamily (branch 1) D1103_01195 PF03652 Holliday junction resolvase D1103_01200 PF02622 Uncharacterized ACR, COG1678 D1103_01205 PF04452 RNA methyltransferase D1103_01215 PF01722 BolA-like protein D1103_01240 PF07516 SecA Wing and Scaffold domain D1103_01240 PF01043 SecA preprotein cross-linking domain D1103_01240 PF07517 SecA DEAD-like domain D1103_01240 PF02810 SEC-C motif D1103_01250 PF00293 NUDIX domain D1103_01255 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1103_01260 PF00696 Amino acid kinase family D1103_01265 PF00202 Aminotransferase class-III D1103_01280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1103_01280 PF07498 Rho termination factor, N-terminal domain D1103_01280 PF07497 Rho termination factor, RNA-binding domain D1103_01285 PF00291 Pyridoxal-phosphate dependent enzyme D1103_01290 PF08544 GHMP kinases C terminal D1103_01290 PF00288 GHMP kinases N terminal domain D1103_01295 PF00696 Amino acid kinase family D1103_01295 PF01842 ACT domain D1103_01295 PF13840 ACT domain D1103_01295 PF00742 Homoserine dehydrogenase D1103_01295 PF03447 Homoserine dehydrogenase, NAD binding domain D1103_01300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1103_01300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1103_01305 PF00842 Alanine racemase, C-terminal domain D1103_01305 PF01168 Alanine racemase, N-terminal domain D1103_01310 PF13538 UvrD-like helicase C-terminal domain D1103_01345 PF07687 Peptidase dimerisation domain D1103_01345 PF01546 Peptidase family M20/M25/M40 D1103_01350 PF00156 Phosphoribosyl transferase domain D1103_01355 PF00625 Guanylate kinase D1103_01360 PF02321 Outer membrane efflux protein D1103_01365 PF03658 RnfH family Ubiquitin D1103_01370 PF03364 Polyketide cyclase / dehydrase and lipid transport D1103_01375 PF00005 ABC transporter D1103_01375 PF03459 TOBE domain D1103_01380 PF00528 Binding-protein-dependent transport system inner membrane component D1103_01390 PF01061 ABC-2 type transporter D1103_01395 PF00005 ABC transporter D1103_01400 PF12169 DNA polymerase III subunits gamma and tau domain III D1103_01400 PF12170 DNA polymerase III tau subunit V interacting with alpha D1103_01405 PF00156 Phosphoribosyl transferase domain D1103_01415 PF01042 Endoribonuclease L-PSP D1103_01425 PF04073 Aminoacyl-tRNA editing domain D1103_01430 PF00005 ABC transporter D1103_01435 PF01297 Zinc-uptake complex component A periplasmic D1103_01440 PF04358 DsrC like protein D1103_01445 PF01027 Inhibitor of apoptosis-promoting Bax1 D1103_01450 PF01066 CDP-alcohol phosphatidyltransferase D1103_01460 PF08459 UvrC Helix-hairpin-helix N-terminal D1103_01460 PF02151 UvrB/uvrC motif D1103_01460 PF01541 GIY-YIG catalytic domain D1103_01465 PF01026 TatD related DNase D1103_01470 PF00580 UvrD/REP helicase N-terminal domain D1103_01470 PF13361 UvrD-like helicase C-terminal domain D1103_01475 PF00005 ABC transporter D1103_01475 PF08402 TOBE domain D1103_01480 PF00528 Binding-protein-dependent transport system inner membrane component D1103_01485 PF00528 Binding-protein-dependent transport system inner membrane component D1103_01490 PF01330 RuvA N terminal domain D1103_01490 PF07499 RuvA, C-terminal domain D1103_01495 PF17864 RuvB AAA lid domain D1103_01495 PF05491 RuvB C-terminal winged helix domain D1103_01495 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1103_01505 PF03989 DNA gyrase C-terminal domain, beta-propeller D1103_01505 PF00521 DNA gyrase/topoisomerase IV, subunit A D1103_01510 PF12161 HsdM N-terminal domain D1103_01510 PF02384 N-6 DNA Methylase D1103_01520 PF01420 Type I restriction modification DNA specificity domain D1103_01530 PF12008 Type I restriction and modification enzyme - subunit R C terminal D1103_01530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1103_01530 PF18766 SWI2/SNF2 ATPase D1103_01535 PF00005 ABC transporter D1103_01535 PF16326 ABC transporter C-terminal domain D1103_01535 PF12848 ABC transporter D1103_01540 PF00899 ThiF family D1103_01550 PF17274 Family of unknown function (DUF5339) D1103_01555 PF01654 Cytochrome bd terminal oxidase subunit I D1103_01560 PF02322 Cytochrome bd terminal oxidase subunit II D1103_01575 PF03061 Thioesterase superfamily D1103_01580 PF01618 MotA/TolQ/ExbB proton channel family D1103_01585 PF02472 Biopolymer transport protein ExbD/TolR D1103_01590 PF06519 TolA C-terminal D1103_01590 PF06519 TolA C-terminal D1103_01595 PF07676 WD40-like Beta Propeller Repeat D1103_01595 PF04052 TolB amino-terminal domain D1103_01600 PF00691 OmpA family D1103_01610 PF05099 Tellurite resistance protein TerB D1103_01610 PF00226 DnaJ domain D1103_01615 PF01207 Dihydrouridine synthase (Dus) D1103_01620 PF05128 Domain of unknown function (DUF697) D1103_01625 PF00005 ABC transporter D1103_01625 PF12848 ABC transporter D1103_01635 PF00994 Probable molybdopterin binding domain D1103_01635 PF03454 MoeA C-terminal region (domain IV) D1103_01635 PF03453 MoeA N-terminal region (domain I and II) D1103_01640 PF00899 ThiF family D1103_01650 PF01938 TRAM domain D1103_01650 PF05958 tRNA (Uracil-5-)-methyltransferase D1103_01655 PF01966 HD domain D1103_01655 PF13286 Phosphohydrolase-associated domain D1103_01660 PF18337 RapA N-terminal Tudor like domain D1103_01660 PF00176 SNF2 family N-terminal domain D1103_01660 PF18339 RapA N-terminal Tudor like domain 1 D1103_01660 PF00271 Helicase conserved C-terminal domain D1103_01660 PF12137 RNA polymerase recycling family C-terminal D1103_01665 PF00849 RNA pseudouridylate synthase D1103_01670 PF01510 N-acetylmuramoyl-L-alanine amidase D1103_01675 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1103_01680 PF00156 Phosphoribosyl transferase domain D1103_01685 PF01717 Cobalamin-independent synthase, Catalytic domain D1103_01690 PF01053 Cys/Met metabolism PLP-dependent enzyme D1103_01695 PF02600 Disulfide bond formation protein DsbB D1103_01700 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D1103_01705 PF07840 FadR C-terminal domain D1103_01705 PF00392 Bacterial regulatory proteins, gntR family D1103_01710 PF02562 PhoH-like protein D1103_01745 PF02146 Sir2 family D1103_01765 PF02146 Sir2 family D1103_01790 PF00293 NUDIX domain D1103_01795 PF01494 FAD binding domain D1103_01820 PF01494 FAD binding domain D1103_01825 PF03668 P-loop ATPase protein family D1103_01830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1103_01835 PF00005 ABC transporter D1103_01835 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1103_01840 PF03968 OstA-like protein D1103_01850 PF00311 Phosphoenolpyruvate carboxylase D1103_01855 PF04536 TPM domain D1103_01865 PF04011 LemA family D1103_01870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1103_01875 PF00294 pfkB family carbohydrate kinase D1103_01880 PF00381 PTS HPr component phosphorylation site D1103_01880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1103_01885 PF00128 Alpha amylase, catalytic domain D1103_01885 PF02806 Alpha amylase, C-terminal all-beta domain D1103_01885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1103_01890 PF18390 Glycogen debranching enzyme C-terminal domain D1103_01890 PF00128 Alpha amylase, catalytic domain D1103_01890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1103_01895 PF00483 Nucleotidyl transferase D1103_01900 PF08323 Starch synthase catalytic domain D1103_01900 PF00534 Glycosyl transferases group 1 D1103_01905 PF00343 Carbohydrate phosphorylase D1103_01915 PF00334 Nucleoside diphosphate kinase D1103_01920 PF08264 Anticodon-binding domain of tRNA D1103_01920 PF09334 tRNA synthetases class I (M) D1103_01920 PF01588 Putative tRNA binding domain D1103_01925 PF13378 Enolase C-terminal domain-like D1103_01935 PF00849 RNA pseudouridylate synthase D1103_01935 PF01479 S4 domain D1103_01940 PF07690 Major Facilitator Superfamily D1103_01955 PF01261 Xylose isomerase-like TIM barrel D1103_01960 PF00877 NlpC/P60 family D1103_01965 PF00717 Peptidase S24-like D1103_01970 PF01228 Glycine radical D1103_01975 PF03167 Uracil DNA glycosylase superfamily D1103_01980 PF04393 Protein of unknown function (DUF535) D1103_01985 PF03797 Autotransporter beta-domain D1103_01985 PF00082 Subtilase family D1103_01990 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1103_01990 PF00271 Helicase conserved C-terminal domain D1103_01990 PF04408 Helicase associated domain (HA2) D1103_01990 PF00270 DEAD/DEAH box helicase D1103_01990 PF11898 Domain of unknown function (DUF3418) D1103_01995 PF04284 Protein of unknown function (DUF441) D1103_02000 PF01025 GrpE D1103_02005 PF13416 Bacterial extracellular solute-binding protein D1103_02010 PF01554 MatE D1103_02015 PF00580 UvrD/REP helicase N-terminal domain D1103_02015 PF12705 PD-(D/E)XK nuclease superfamily D1103_02015 PF13361 UvrD-like helicase C-terminal domain D1103_02020 PF00795 Carbon-nitrogen hydrolase D1103_02025 PF00571 CBS domain D1103_02025 PF03471 Transporter associated domain D1103_02030 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1103_02035 PF00230 Major intrinsic protein D1103_02040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1103_02040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1103_02045 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1103_02045 PF05362 Lon protease (S16) C-terminal proteolytic domain D1103_02045 PF00004 ATPase family associated with various cellular activities (AAA) D1103_02050 PF07690 Major Facilitator Superfamily D1103_02055 PF03009 Glycerophosphoryl diester phosphodiesterase family D1103_02060 PF01266 FAD dependent oxidoreductase D1103_02060 PF04324 BFD-like [2Fe-2S] binding domain D1103_02065 PF00890 FAD binding domain D1103_02070 PF02754 Cysteine-rich domain D1103_02070 PF13183 4Fe-4S dicluster domain D1103_02075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1103_02075 PF01872 RibD C-terminal domain D1103_02080 PF00677 Lumazine binding domain D1103_02085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1103_02085 PF00925 GTP cyclohydrolase II D1103_02090 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1103_02095 PF01272 Transcription elongation factor, GreA/GreB, C-term D1103_02095 PF03449 Transcription elongation factor, N-terminal D1103_02100 PF01380 SIS domain D1103_02100 PF00571 CBS domain D1103_02105 PF12404 Peptidase D1103_02105 PF00883 Cytosol aminopeptidase family, catalytic domain D1103_02110 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D1103_02115 PF01758 Sodium Bile acid symporter family D1103_02120 PF13533 Biotin-lipoyl like D1103_02130 PF00682 HMGL-like D1103_02130 PF08502 LeuA allosteric (dimerisation) domain D1103_02135 PF04542 Sigma-70 region 2 D1103_02135 PF08281 Sigma-70, region 4 D1103_02140 PF03872 Anti sigma-E protein RseA, N-terminal domain D1103_02140 PF03873 Anti sigma-E protein RseA, C-terminal domain D1103_02150 PF00501 AMP-binding enzyme D1103_02150 PF13193 AMP-binding enzyme C-terminal domain D1103_02160 PF00398 Ribosomal RNA adenine dimethylase D1103_02165 PF00639 PPIC-type PPIASE domain D1103_02165 PF09312 SurA N-terminal domain D1103_02170 PF00156 Phosphoribosyl transferase domain D1103_02175 PF01467 Cytidylyltransferase-like D1103_02175 PF00294 pfkB family carbohydrate kinase D1103_02180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1103_02180 PF01926 50S ribosome-binding GTPase D1103_02185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1103_02185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1103_02185 PF01488 Shikimate / quinate 5-dehydrogenase D1103_02190 PF02824 TGS domain D1103_02190 PF13291 ACT domain D1103_02190 PF04607 Region found in RelA / SpoT proteins D1103_02195 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1103_02195 PF13288 DXP reductoisomerase C-terminal domain D1103_02195 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1103_02200 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1103_02200 PF00132 Bacterial transferase hexapeptide (six repeats) D1103_02205 PF07977 FabA-like domain D1103_02210 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1103_02210 PF00132 Bacterial transferase hexapeptide (six repeats) D1103_02220 PF07244 Surface antigen variable number repeat D1103_02220 PF01103 Surface antigen D1103_02225 PF02163 Peptidase family M50 D1103_02235 PF01255 Putative undecaprenyl diphosphate synthase D1103_02240 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1103_02240 PF00753 Metallo-beta-lactamase superfamily D1103_02245 PF00480 ROK family D1103_02250 PF01569 PAP2 superfamily D1103_02255 PF01985 CRS1 / YhbY (CRM) domain D1103_02260 PF00535 Glycosyl transferase family 2 D1103_02265 PF00768 D-alanyl-D-alanine carboxypeptidase D1103_02270 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1103_02275 PF00764 Arginosuccinate synthase D1103_02280 PF00075 RNase H D1103_02285 PF02674 Colicin V production protein D1103_02290 PF00156 Phosphoribosyl transferase domain D1103_02295 PF18470 Cas9 alpha-helical lobe domain D1103_02295 PF13395 HNH endonuclease D1103_02295 PF18541 RuvC endonuclease subdomain 3 D1103_02300 PF01867 CRISPR associated protein Cas1 D1103_02305 PF09827 CRISPR associated protein Cas2 D1103_02325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D1103_02325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D1103_02330 PF04355 SmpA / OmlA family D1103_02335 PF04245 37-kD nucleoid-associated bacterial protein D1103_02340 PF01042 Endoribonuclease L-PSP D1103_02345 PF02578 Multi-copper polyphenol oxidoreductase laccase D1103_02355 PF00589 Phage integrase family D1103_02445 PF00717 Peptidase S24-like D1103_02515 PF03354 Phage Terminase D1103_02600 PF00877 NlpC/P60 family D1103_02630 PF07119 Protein of unknown function (DUF1375) D1103_02635 PF00180 Isocitrate/isopropylmalate dehydrogenase D1103_02640 PF01641 SelR domain D1103_02645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1103_02645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1103_02655 PF04085 rod shape-determining protein MreC D1103_02660 PF04093 rod shape-determining protein MreD D1103_02665 PF00004 ATPase family associated with various cellular activities (AAA) D1103_02665 PF16193 AAA C-terminal domain D1103_02665 PF12002 MgsA AAA+ ATPase C terminal D1103_02670 PF00950 ABC 3 transport family D1103_02675 PF13230 Glutamine amidotransferases class-II D1103_02680 PF00561 alpha/beta hydrolase fold D1103_02685 PF02698 DUF218 domain D1103_02695 PF02589 LUD domain D1103_02700 PF13183 4Fe-4S dicluster domain D1103_02700 PF11870 Domain of unknown function (DUF3390) D1103_02700 PF02589 LUD domain D1103_02705 PF02754 Cysteine-rich domain D1103_02710 PF02652 L-lactate permease D1103_02720 PF03553 Na+/H+ antiporter family D1103_02725 PF13407 Periplasmic binding protein domain D1103_02730 PF02629 CoA binding domain D1103_02730 PF00549 CoA-ligase D1103_02735 PF08442 ATP-grasp domain D1103_02735 PF00549 CoA-ligase D1103_02740 PF04393 Protein of unknown function (DUF535) D1103_02745 PF02817 e3 binding domain D1103_02745 PF00364 Biotin-requiring enzyme D1103_02745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1103_02750 PF16078 2-oxoglutarate dehydrogenase N-terminus D1103_02750 PF16870 2-oxoglutarate dehydrogenase C-terminal D1103_02750 PF00676 Dehydrogenase E1 component D1103_02750 PF02779 Transketolase, pyrimidine binding domain D1103_02755 PF00005 ABC transporter D1103_02760 PF04225 Opacity-associated protein A LysM-like domain D1103_02760 PF01551 Peptidase family M23 D1103_02765 PF10411 Disulfide bond isomerase protein N-terminus D1103_02765 PF13098 Thioredoxin-like domain D1103_02770 PF17768 RecJ OB domain D1103_02770 PF02272 DHHA1 domain D1103_02770 PF01368 DHH family D1103_02775 PF00691 OmpA family D1103_02775 PF01389 OmpA-like transmembrane domain D1103_02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_02785 PF07730 Histidine kinase D1103_02785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1103_02785 PF00672 HAMP domain D1103_02795 PF01725 Ham1 family D1103_02800 PF01906 Putative heavy-metal-binding D1103_02805 PF01268 Formate--tetrahydrofolate ligase D1103_02810 PF03692 Putative zinc- or iron-chelating domain D1103_02815 PF00106 short chain dehydrogenase D1103_02820 PF00291 Pyridoxal-phosphate dependent enzyme D1103_02825 PF00290 Tryptophan synthase alpha chain D1103_02830 PF12441 CopG antitoxin of type II toxin-antitoxin system D1103_02840 PF01612 3'-5' exonuclease D1103_02840 PF00476 DNA polymerase family A D1103_02840 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1103_02840 PF01367 5'-3' exonuclease, C-terminal SAM fold D1103_02845 PF03548 Outer membrane lipoprotein carrier protein LolA D1103_02850 PF01371 Trp repressor protein D1103_02855 PF00912 Transglycosylase D1103_02860 PF02627 Carboxymuconolactone decarboxylase family D1103_02890 PF00881 Nitroreductase family D1103_02895 PF08443 RimK-like ATP-grasp domain D1103_02895 PF18030 RimK PreATP-grasp domain D1103_02900 PF02698 DUF218 domain D1103_02905 PF00390 Malic enzyme, N-terminal domain D1103_02905 PF03949 Malic enzyme, NAD binding domain D1103_02905 PF01515 Phosphate acetyl/butaryl transferase D1103_02910 PF01386 Ribosomal L25p family D1103_02920 PF06226 Protein of unknown function (DUF1007) D1103_02925 PF03824 High-affinity nickel-transport protein D1103_02930 PF01235 Sodium:alanine symporter family D1103_02935 PF00005 ABC transporter D1103_02940 PF00005 ABC transporter D1103_02950 PF00899 ThiF family D1103_02955 PF05690 Thiazole biosynthesis protein ThiG D1103_02965 PF04055 Radical SAM superfamily D1103_02965 PF06968 Biotin and Thiamin Synthesis associated domain D1103_02970 PF03070 TENA/THI-4/PQQC family D1103_02975 PF09084 NMT1/THI5 like D1103_02980 PF08543 Phosphomethylpyrimidine kinase D1103_02985 PF02581 Thiamine monophosphate synthase D1103_02990 PF00009 Elongation factor Tu GTP binding domain D1103_02990 PF03144 Elongation factor Tu domain 2 D1103_02990 PF06421 GTP-binding protein LepA C-terminus D1103_02990 PF00679 Elongation factor G C-terminus D1103_02995 PF10502 Signal peptidase, peptidase S26 D1103_03000 PF00035 Double-stranded RNA binding motif D1103_03000 PF14622 Ribonuclease-III-like D1103_03005 PF07650 KH domain D1103_03005 PF01926 50S ribosome-binding GTPase D1103_03010 PF11967 Recombination protein O N terminal D1103_03010 PF02565 Recombination protein O C terminal D1103_03045 PF00437 Type II/IV secretion system protein D1103_03060 PF03958 Bacterial type II/III secretion system short domain D1103_03060 PF00263 Bacterial type II and III secretion system protein D1103_03085 PF00271 Helicase conserved C-terminal domain D1103_03085 PF00270 DEAD/DEAH box helicase D1103_03095 PF05872 Bacterial protein of unknown function (DUF853) D1103_03105 PF00528 Binding-protein-dependent transport system inner membrane component D1103_03120 PF00318 Ribosomal protein S2 D1103_03125 PF00889 Elongation factor TS D1103_03130 PF00884 Sulfatase D1103_03135 PF00696 Amino acid kinase family D1103_03140 PF01765 Ribosome recycling factor D1103_03145 PF00155 Aminotransferase class I and II D1103_03145 PF00392 Bacterial regulatory proteins, gntR family D1103_03150 PF01680 SOR/SNZ family D1103_03155 PF01174 SNO glutamine amidotransferase family D1103_03160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1103_03165 PF03880 DbpA RNA binding domain D1103_03165 PF00270 DEAD/DEAH box helicase D1103_03165 PF00271 Helicase conserved C-terminal domain D1103_03175 PF00575 S1 RNA binding domain D1103_03175 PF03725 3' exoribonuclease family, domain 2 D1103_03175 PF01138 3' exoribonuclease family, domain 1 D1103_03175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1103_03175 PF00013 KH domain D1103_03180 PF00521 DNA gyrase/topoisomerase IV, subunit A D1103_03180 PF03989 DNA gyrase C-terminal domain, beta-propeller D1103_03190 PF03882 MukF winged-helix domain D1103_03190 PF17192 MukF middle domain D1103_03190 PF17193 MukF C-terminal domain D1103_03195 PF04288 MukE-like family D1103_03200 PF04310 MukB N-terminal D1103_03200 PF16330 MukB hinge domain D1103_03205 PF07690 Major Facilitator Superfamily D1103_03210 PF00884 Sulfatase D1103_03210 PF11893 Domain of unknown function (DUF3413) D1103_03215 PF07208 Protein of unknown function (DUF1414) D1103_03220 PF00440 Bacterial regulatory proteins, tetR family D1103_03225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1103_03230 PF00873 AcrB/AcrD/AcrF family D1103_03235 PF12804 MobA-like NTP transferase domain D1103_03235 PF00132 Bacterial transferase hexapeptide (six repeats) D1103_03250 PF08942 Domain of unknown function (DUF1919) D1103_03255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1103_03255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1103_03255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1103_03255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1103_03260 PF00117 Glutamine amidotransferase class-I D1103_03260 PF00958 GMP synthase C terminal domain D1103_03260 PF02540 NAD synthase D1103_03270 PF00571 CBS domain D1103_03270 PF00478 IMP dehydrogenase / GMP reductase domain D1103_03275 PF01728 FtsJ-like methyltransferase D1103_03280 PF01434 Peptidase family M41 D1103_03280 PF17862 AAA+ lid domain D1103_03280 PF06480 FtsH Extracellular D1103_03280 PF00004 ATPase family associated with various cellular activities (AAA) D1103_03285 PF03222 Tryptophan/tyrosine permease family D1103_03290 PF03222 Tryptophan/tyrosine permease family D1103_03295 PF08335 GlnD PII-uridylyltransferase D1103_03295 PF01966 HD domain D1103_03300 PF06295 Protein of unknown function (DUF1043) D1103_03305 PF00572 Ribosomal protein L13 D1103_03310 PF00380 Ribosomal protein S9/S16 D1103_03315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D1103_03320 PF03883 Peroxide stress protein YaaA D1103_03330 PF16916 Dimerisation domain of Zinc Transporter D1103_03330 PF01545 Cation efflux family D1103_03335 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D1103_03340 PF00375 Sodium:dicarboxylate symporter family D1103_03345 PF00881 Nitroreductase family D1103_03350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1103_03350 PF01409 tRNA synthetases class II core domain (F) D1103_03355 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1103_03355 PF01588 Putative tRNA binding domain D1103_03355 PF03147 Ferredoxin-fold anticodon binding domain D1103_03355 PF03484 tRNA synthetase B5 domain D1103_03355 PF03483 B3/4 domain D1103_03360 PF00216 Bacterial DNA-binding protein D1103_03365 PF00877 NlpC/P60 family D1103_03380 PF01047 MarR family D1103_03380 PF00480 ROK family D1103_03385 PF01612 3'-5' exonuclease D1103_03385 PF00570 HRDC domain D1103_03390 PF01037 Lrp/AsnC ligand binding domain D1103_03395 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1103_03395 PF17854 FtsK alpha domain D1103_03395 PF09397 Ftsk gamma domain D1103_03395 PF01580 FtsK/SpoIIIE family D1103_03400 PF04228 Putative neutral zinc metallopeptidase D1103_03405 PF00793 DAHP synthetase I family D1103_03410 PF00814 Glycoprotease family D1103_03415 PF00265 Thymidine kinase D1103_03420 PF06005 Cell division protein ZapB D1103_03425 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1103_03430 PF01784 NIF3 (NGG1p interacting factor 3) D1103_03435 PF12704 MacB-like periplasmic core domain D1103_03435 PF02687 FtsX-like permease family D1103_03435 PF00005 ABC transporter D1103_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_03440 PF00672 HAMP domain D1103_03440 PF16527 Two-component sensor protein CpxA, periplasmic domain D1103_03440 PF00512 His Kinase A (phospho-acceptor) domain D1103_03445 PF00072 Response regulator receiver domain D1103_03445 PF00486 Transcriptional regulatory protein, C terminal D1103_03450 PF03819 MazG nucleotide pyrophosphohydrolase domain D1103_03455 PF01039 Carboxyl transferase domain D1103_03455 PF17848 Acetyl-coA carboxylase zinc finger domain D1103_03460 PF08245 Mur ligase middle domain D1103_03470 PF02576 RimP N-terminal domain D1103_03470 PF17384 RimP C-terminal SH3 domain D1103_03475 PF08529 NusA N-terminal domain D1103_03475 PF00575 S1 RNA binding domain D1103_03475 PF13184 NusA-like KH domain D1103_03480 PF00009 Elongation factor Tu GTP binding domain D1103_03480 PF11987 Translation-initiation factor 2 D1103_03480 PF04760 Translation initiation factor IF-2, N-terminal region D1103_03485 PF02033 Ribosome-binding factor A D1103_03490 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1103_03490 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1103_03490 PF09157 Pseudouridine synthase II TruB, C-terminal D1103_03495 PF13406 Transglycosylase SLT domain D1103_03500 PF07411 Domain of unknown function (DUF1508) D1103_03505 PF01515 Phosphate acetyl/butaryl transferase D1103_03505 PF07085 DRTGG domain D1103_03510 PF00871 Acetokinase family D1103_03515 PF00149 Calcineurin-like phosphoesterase D1103_03515 PF02872 5'-nucleotidase, C-terminal domain D1103_03525 PF13609 Gram-negative porin D1103_03535 PF00483 Nucleotidyl transferase D1103_03540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1103_03540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1103_03540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1103_03540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1103_03545 PF02599 Global regulator protein family D1103_03550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1103_03550 PF01411 tRNA synthetases class II (A) D1103_03550 PF02272 DHHA1 domain D1103_03555 PF00582 Universal stress protein family D1103_03560 PF00027 Cyclic nucleotide-binding domain D1103_03560 PF00325 Bacterial regulatory proteins, crp family D1103_03565 PF04386 Stringent starvation protein B D1103_03570 PF00043 Glutathione S-transferase, C-terminal domain D1103_03570 PF02798 Glutathione S-transferase, N-terminal domain D1103_03575 PF00731 AIR carboxylase D1103_03580 PF00710 Asparaginase, N-terminal D1103_03580 PF17763 Glutaminase/Asparaginase C-terminal domain D1103_03585 PF02222 ATP-grasp domain D1103_03585 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1103_03590 PF00155 Aminotransferase class I and II D1103_03595 PF05195 Aminopeptidase P, N-terminal domain D1103_03595 PF00557 Metallopeptidase family M24 D1103_03610 PF00271 Helicase conserved C-terminal domain D1103_03610 PF17757 UvrB interaction domain D1103_03610 PF12344 Ultra-violet resistance protein B D1103_03610 PF02151 UvrB/uvrC motif D1103_03610 PF04851 Type III restriction enzyme, res subunit D1103_03620 PF09375 Imelysin D1103_03625 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1103_03625 PF04261 Dyp-type peroxidase family D1103_03635 PF02811 PHP domain D1103_03645 PF08411 Exonuclease C-terminal D1103_03645 PF00929 Exonuclease D1103_03650 PF00654 Voltage gated chloride channel D1103_03655 PF01336 OB-fold nucleic acid binding domain D1103_03655 PF00152 tRNA synthetases class II (D, K and N) D1103_03660 PF04055 Radical SAM superfamily D1103_03670 PF01132 Elongation factor P (EF-P) OB domain D1103_03670 PF08207 Elongation factor P (EF-P) KOW-like domain D1103_03670 PF09285 Elongation factor P, C-terminal D1103_03675 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1103_03675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1103_03680 PF07690 Major Facilitator Superfamily D1103_03685 PF01464 Transglycosylase SLT domain D1103_03685 PF14718 Soluble lytic murein transglycosylase L domain D1103_03690 PF00156 Phosphoribosyl transferase domain D1103_03695 PF01053 Cys/Met metabolism PLP-dependent enzyme D1103_03700 PF01113 Dihydrodipicolinate reductase, N-terminus D1103_03700 PF05173 Dihydrodipicolinate reductase, C-terminus D1103_03705 PF18125 RlmM ferredoxin-like domain D1103_03705 PF01728 FtsJ-like methyltransferase D1103_03710 PF04241 Protein of unknown function (DUF423) D1103_03715 PF09330 D-lactate dehydrogenase, membrane binding D1103_03715 PF01565 FAD binding domain D1103_03720 PF01568 Molydopterin dinucleotide binding domain D1103_03720 PF00384 Molybdopterin oxidoreductase D1103_03720 PF18364 Molybdopterin oxidoreductase N-terminal domain D1103_03725 PF03264 NapC/NirT cytochrome c family, N-terminal region D1103_03730 PF04055 Radical SAM superfamily D1103_03730 PF06463 Molybdenum Cofactor Synthesis C D1103_03735 PF01967 MoaC family D1103_03740 PF02597 ThiS family D1103_03745 PF02391 MoaE protein D1103_03750 PF02130 Uncharacterized protein family UPF0054 D1103_03755 PF17176 tRNA-binding domain D1103_03755 PF13718 GNAT acetyltransferase 2 D1103_03755 PF05127 Helicase D1103_03760 PF01396 Topoisomerase DNA binding C4 zinc finger D1103_03760 PF01131 DNA topoisomerase D1103_03760 PF01751 Toprim domain D1103_03760 PF08272 Topoisomerase I zinc-ribbon-like D1103_03765 PF03466 LysR substrate binding domain D1103_03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_03770 PF00583 Acetyltransferase (GNAT) family D1103_03770 PF00696 Amino acid kinase family D1103_03775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1103_03780 PF00155 Aminotransferase class I and II D1103_03785 PF01053 Cys/Met metabolism PLP-dependent enzyme D1103_03790 PF00266 Aminotransferase class-V D1103_03795 PF00271 Helicase conserved C-terminal domain D1103_03795 PF00176 SNF2 family N-terminal domain D1103_03810 PF01555 DNA methylase D1103_03820 PF01380 SIS domain D1103_03820 PF01418 Helix-turn-helix domain, rpiR family D1103_03825 PF04074 YhcH/YjgK/YiaL D1103_03830 PF02541 Ppx/GppA phosphatase family D1103_03835 PF04363 Protein of unknown function (DUF496) D1103_03840 PF01842 ACT domain D1103_03840 PF00696 Amino acid kinase family D1103_03845 PF03477 ATP cone domain D1103_03850 PF05166 YcgL domain D1103_03855 PF03796 DnaB-like helicase C terminal domain D1103_03855 PF00772 DnaB-like helicase N terminal domain D1103_03860 PF01497 Periplasmic binding protein D1103_03865 PF01032 FecCD transport family D1103_03870 PF01032 FecCD transport family D1103_03875 PF00005 ABC transporter D1103_03880 PF01865 Protein of unknown function DUF47 D1103_03885 PF01384 Phosphate transporter family D1103_03890 PF08239 Bacterial SH3 domain D1103_03900 PF01814 Hemerythrin HHE cation binding domain D1103_03905 PF01702 Queuine tRNA-ribosyltransferase D1103_03915 PF00313 'Cold-shock' DNA-binding domain D1103_03920 PF00484 Carbonic anhydrase D1103_03925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1103_03925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1103_03925 PF00205 Thiamine pyrophosphate enzyme, central domain D1103_03930 PF10369 Small subunit of acetolactate synthase D1103_03935 PF01523 Putative modulator of DNA gyrase D1103_03940 PF04751 Protein of unknown function (DUF615) D1103_03945 PF04247 Invasion gene expression up-regulator, SirB D1103_03950 PF02441 Flavoprotein D1103_03955 PF04474 Protein of unknown function (DUF554) D1103_03965 PF01253 Translation initiation factor SUI1 D1103_03970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1103_03975 PF18073 Rubredoxin metal binding domain D1103_03980 PF06305 Lipopolysaccharide assembly protein A domain D1103_03985 PF00216 Bacterial DNA-binding protein D1103_03990 PF00575 S1 RNA binding domain D1103_03995 PF02224 Cytidylate kinase D1103_04000 PF13180 PDZ domain D1103_04010 PF03840 Preprotein translocase SecG subunit D1103_04015 PF01751 Toprim domain D1103_04015 PF01131 DNA topoisomerase D1103_04020 PF00245 Alkaline phosphatase D1103_04030 PF03411 Penicillin-insensitive murein endopeptidase D1103_04035 PF01264 Chorismate synthase D1103_04040 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1103_04040 PF12795 Mechanosensitive ion channel porin domain D1103_04040 PF00924 Mechanosensitive ion channel D1103_04045 PF00924 Mechanosensitive ion channel D1103_04045 PF12795 Mechanosensitive ion channel porin domain D1103_04045 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1103_04050 PF00501 AMP-binding enzyme D1103_04055 PF17206 SeqA protein N-terminal domain D1103_04055 PF03925 SeqA protein C-terminal domain D1103_04060 PF00561 alpha/beta hydrolase fold D1103_04065 PF13649 Methyltransferase domain D1103_04085 PF00575 S1 RNA binding domain D1103_04085 PF00773 RNB domain D1103_04085 PF08206 Ribonuclease B OB domain D1103_04090 PF03788 LrgA family D1103_04095 PF04172 LrgB-like family D1103_04100 PF00149 Calcineurin-like phosphoesterase D1103_04110 PF03889 Alternative ribosome-rescue factor A D1103_04115 PF13649 Methyltransferase domain D1103_04120 PF01594 AI-2E family transporter D1103_04125 PF01933 Uncharacterised protein family UPF0052 D1103_04130 PF02547 Queuosine biosynthesis protein D1103_04135 PF13567 Domain of unknown function (DUF4131) D1103_04135 PF03772 Competence protein D1103_04135 PF00753 Metallo-beta-lactamase superfamily D1103_04140 PF00375 Sodium:dicarboxylate symporter family D1103_04145 PF01219 Prokaryotic diacylglycerol kinase D1103_04150 PF00149 Calcineurin-like phosphoesterase D1103_04150 PF02872 5'-nucleotidase, C-terminal domain D1103_04170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1103_04170 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1103_04175 PF02817 e3 binding domain D1103_04175 PF00364 Biotin-requiring enzyme D1103_04175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1103_04180 PF00456 Transketolase, thiamine diphosphate binding domain D1103_04180 PF17831 Pyruvate dehydrogenase E1 component middle domain D1103_04185 PF01180 Dihydroorotate dehydrogenase D1103_04190 PF14572 Phosphoribosyl synthetase-associated domain D1103_04190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1103_04195 PF08544 GHMP kinases C terminal D1103_04195 PF00288 GHMP kinases N terminal domain D1103_04200 PF03550 Outer membrane lipoprotein LolB D1103_04205 PF00664 ABC transporter transmembrane region D1103_04205 PF00005 ABC transporter D1103_04210 PF04172 LrgB-like family D1103_04220 PF06733 DEAD_2 D1103_04220 PF13307 Helicase C-terminal domain D1103_04230 PF17755 UvrA DNA-binding domain D1103_04230 PF17760 UvrA interaction domain D1103_04235 PF00436 Single-strand binding protein family D1103_04270 PF03466 LysR substrate binding domain D1103_04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_04275 PF03060 Nitronate monooxygenase D1103_04285 PF04237 YjbR D1103_04290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1103_04290 PF00005 ABC transporter D1103_04295 PF12911 N-terminal TM domain of oligopeptide transport permease C D1103_04295 PF00528 Binding-protein-dependent transport system inner membrane component D1103_04300 PF00528 Binding-protein-dependent transport system inner membrane component D1103_04305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_04310 PF18024 Helix-turn-helix domain D1103_04310 PF00158 Sigma-54 interaction domain D1103_04315 PF13580 SIS domain D1103_04320 PF01293 Phosphoenolpyruvate carboxykinase D1103_04325 PF04977 Septum formation initiator D1103_04330 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1103_04335 PF02542 YgbB family D1103_04345 PF00884 Sulfatase D1103_04350 PF00111 2Fe-2S iron-sulfur cluster binding domain D1103_04350 PF03473 MOSC domain D1103_04350 PF03476 MOSC N-terminal beta barrel domain D1103_04355 PF02609 Exonuclease VII small subunit D1103_04360 PF00348 Polyprenyl synthetase D1103_04370 PF01336 OB-fold nucleic acid binding domain D1103_04370 PF00152 tRNA synthetases class II (D, K and N) D1103_04375 PF00575 S1 RNA binding domain D1103_04375 PF10150 Ribonuclease E/G family D1103_04380 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D1103_04380 PF18381 YcaO cyclodehydratase C-terminal domain D1103_04385 PF04851 Type III restriction enzyme, res subunit D1103_04385 PF08774 VRR-NUC domain D1103_04390 PF18273 Type III R-M EcoP15I C-terminal domain D1103_04390 PF01555 DNA methylase D1103_04400 PF08003 Protein of unknown function (DUF1698) D1103_04410 PF06725 3D domain D1103_04410 PF03562 MltA specific insert domain D1103_04420 PF02601 Exonuclease VII, large subunit D1103_04420 PF13742 OB-fold nucleic acid binding domain D1103_04430 PF00576 HIUase/Transthyretin family D1103_04435 PF00356 Bacterial regulatory proteins, lacI family D1103_04435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1103_04440 PF09335 SNARE associated Golgi protein D1103_04445 PF01751 Toprim domain D1103_04445 PF18053 DNA gyrase B subunit insert domain D1103_04445 PF00204 DNA gyrase B D1103_04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_04445 PF00986 DNA gyrase B subunit, carboxyl terminus D1103_04450 PF01040 UbiA prenyltransferase family D1103_04455 PF08220 DeoR-like helix-turn-helix domain D1103_04455 PF00455 DeoR C terminal sensor domain D1103_04460 PF00206 Lyase D1103_04460 PF08328 Adenylosuccinate lyase C-terminal D1103_04465 PF04356 Protein of unknown function (DUF489) D1103_04470 PF00005 ABC transporter D1103_04470 PF00664 ABC transporter transmembrane region D1103_04475 PF00005 ABC transporter D1103_04475 PF00664 ABC transporter transmembrane region D1103_04480 PF04357 TamB, inner membrane protein subunit of TAM complex D1103_04485 PF17243 POTRA domain TamA domain 1 D1103_04485 PF01103 Surface antigen D1103_04490 PF04748 Divergent polysaccharide deacetylase D1103_04495 PF01551 Peptidase family M23 D1103_04500 PF00300 Histidine phosphatase superfamily (branch 1) D1103_04505 PF01810 LysE type translocator D1103_04510 PF00485 Phosphoribulokinase / Uridine kinase family D1103_04515 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) D1103_04520 PF00440 Bacterial regulatory proteins, tetR family D1103_04520 PF14278 Transcriptional regulator C-terminal region D1103_04525 PF13533 Biotin-lipoyl like D1103_04530 PF00005 ABC transporter D1103_04540 PF02321 Outer membrane efflux protein D1103_04545 PF02233 NAD(P) transhydrogenase beta subunit D1103_04550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1103_04550 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D1103_04550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1103_04555 PF00588 SpoU rRNA Methylase family D1103_04570 PF14489 QueF-like protein D1103_04570 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1103_04580 PF00578 AhpC/TSA family D1103_04585 PF04055 Radical SAM superfamily D1103_04585 PF06969 HemN C-terminal domain D1103_04590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_04595 PF00528 Binding-protein-dependent transport system inner membrane component D1103_04600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1103_04600 PF00005 ABC transporter D1103_04605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1103_04605 PF00005 ABC transporter D1103_04610 PF00890 FAD binding domain D1103_04615 PF01717 Cobalamin-independent synthase, Catalytic domain D1103_04620 PF02219 Methylenetetrahydrofolate reductase D1103_04625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_04630 PF03222 Tryptophan/tyrosine permease family D1103_04635 PF03313 Serine dehydratase alpha chain D1103_04635 PF03315 Serine dehydratase beta chain D1103_04640 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D1103_04640 PF01266 FAD dependent oxidoreductase D1103_04645 PF00218 Indole-3-glycerol phosphate synthase D1103_04645 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1103_04650 PF02661 Fic/DOC family D1103_04650 PF12728 Helix-turn-helix domain D1103_04655 PF04287 tRNA pseudouridine synthase C D1103_04660 PF00849 RNA pseudouridylate synthase D1103_04675 PF01928 CYTH domain D1103_04680 PF04317 YcjX-like family, DUF463 D1103_04685 PF01668 SmpB protein D1103_04690 PF02403 Seryl-tRNA synthetase N-terminal domain D1103_04690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1103_04695 PF01546 Peptidase family M20/M25/M40 D1103_04695 PF07687 Peptidase dimerisation domain D1103_04700 PF03606 C4-dicarboxylate anaerobic carrier D1103_04705 PF03575 Peptidase family S51 D1103_04710 PF00133 tRNA synthetases class I (I, L, M and V) D1103_04710 PF13603 Leucyl-tRNA synthetase, Domain 2 D1103_04710 PF08264 Anticodon-binding domain of tRNA D1103_04715 PF04390 Lipopolysaccharide-assembly D1103_04720 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D1103_04720 PF06144 DNA polymerase III, delta subunit D1103_04725 PF03884 DNA gyrase inhibitor YacG D1103_04730 PF01121 Dephospho-CoA kinase D1103_04740 PF00482 Type II secretion system (T2SS), protein F D1103_04745 PF00437 Type II/IV secretion system protein D1103_04745 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1103_04750 PF07963 Prokaryotic N-terminal methylation motif D1103_04755 PF18073 Rubredoxin metal binding domain D1103_04765 PF00186 Dihydrofolate reductase D1103_04770 PF01472 PUA domain D1103_04770 PF00696 Amino acid kinase family D1103_04775 PF01925 Sulfite exporter TauE/SafE D1103_04780 PF00730 HhH-GPD superfamily base excision DNA repair protein D1103_04780 PF00633 Helix-hairpin-helix motif D1103_04780 PF10576 Iron-sulfur binding domain of endonuclease III D1103_04785 PF00108 Thiolase, N-terminal domain D1103_04785 PF02803 Thiolase, C-terminal domain D1103_04790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1103_04790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1103_04790 PF00378 Enoyl-CoA hydratase/isomerase D1103_04805 PF02634 FdhD/NarQ family D1103_04810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1103_04810 PF01568 Molydopterin dinucleotide binding domain D1103_04810 PF00384 Molybdopterin oxidoreductase D1103_04815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1103_04815 PF00384 Molybdopterin oxidoreductase D1103_04815 PF01568 Molydopterin dinucleotide binding domain D1103_04820 PF13247 4Fe-4S dicluster domain D1103_04820 PF09163 Formate dehydrogenase N, transmembrane D1103_04825 PF01292 Prokaryotic cytochrome b561 D1103_04830 PF04216 Protein involved in formate dehydrogenase formation D1103_04845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1103_04845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1103_04860 PF00701 Dihydrodipicolinate synthetase family D1103_04865 PF03279 Bacterial lipid A biosynthesis acyltransferase D1103_04870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1103_04875 PF01416 tRNA pseudouridine synthase D1103_04880 PF01227 GTP cyclohydrolase I D1103_04895 PF12464 Maltose acetyltransferase D1103_04895 PF14602 Hexapeptide repeat of succinyl-transferase D1103_04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_04905 PF03466 LysR substrate binding domain D1103_04910 PF03180 NLPA lipoprotein D1103_04915 PF03180 NLPA lipoprotein D1103_04920 PF00528 Binding-protein-dependent transport system inner membrane component D1103_04925 PF00005 ABC transporter D1103_04925 PF09383 NIL domain D1103_04930 PF01406 tRNA synthetases class I (C) catalytic domain D1103_04930 PF09190 DALR domain D1103_04935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1103_04940 PF01966 HD domain D1103_04940 PF01743 Poly A polymerase head domain D1103_04940 PF12627 Probable RNA and SrmB- binding site of polymerase A D1103_04950 PF07715 TonB-dependent Receptor Plug Domain D1103_04950 PF00593 TonB dependent receptor D1103_04975 PF04384 Iron-sulphur cluster assembly D1103_04980 PF00111 2Fe-2S iron-sulfur cluster binding domain D1103_04985 PF00012 Hsp70 protein D1103_04990 PF10946 Protein of unknown function DUF2625 D1103_05000 PF07743 HSCB C-terminal oligomerisation domain D1103_05005 PF01521 Iron-sulphur cluster biosynthesis D1103_05010 PF01592 NifU-like N terminal domain D1103_05015 PF00266 Aminotransferase class-V D1103_05020 PF02082 Transcriptional regulator D1103_05025 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1103_05030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1103_05030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1103_05035 PF18415 Histidine kinase receptor ArcB trans-membrane domain D1103_05035 PF01627 Hpt domain D1103_05035 PF00989 PAS fold D1103_05035 PF00072 Response regulator receiver domain D1103_05035 PF00512 His Kinase A (phospho-acceptor) domain D1103_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_05045 PF01713 Smr domain D1103_05055 PF08241 Methyltransferase domain D1103_05060 PF04301 Protein of unknown function (DUF452) D1103_05065 PF00155 Aminotransferase class I and II D1103_05070 PF00202 Aminotransferase class-III D1103_05075 PF05175 Methyltransferase small domain D1103_05080 PF01272 Transcription elongation factor, GreA/GreB, C-term D1103_05080 PF03449 Transcription elongation factor, N-terminal D1103_05085 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1103_05095 PF02142 MGS-like domain D1103_05095 PF01808 AICARFT/IMPCHase bienzyme D1103_05115 PF03968 OstA-like protein D1103_05115 PF04453 LPS transport system D D1103_05120 PF04055 Radical SAM superfamily D1103_05120 PF06969 HemN C-terminal domain D1103_05130 PF04220 Der GTPase activator (YihI) D1103_05135 PF02080 TrkA-C domain D1103_05135 PF06826 Predicted Permease Membrane Region D1103_05140 PF03616 Sodium/glutamate symporter D1103_05145 PF06062 Uncharacterised protein family (UPF0231) D1103_05150 PF03710 Glutamate-ammonia ligase adenylyltransferase D1103_05150 PF08335 GlnD PII-uridylyltransferase D1103_05155 PF03795 YCII-related domain D1103_05160 PF03061 Thioesterase superfamily D1103_05165 PF04279 Intracellular septation protein A D1103_05175 PF04217 Protein of unknown function, DUF412 D1103_05180 PF01171 PP-loop family D1103_05185 PF13726 Na+-H+ antiporter family D1103_05185 PF03553 Na+/H+ antiporter family D1103_05190 PF03372 Endonuclease/Exonuclease/phosphatase family D1103_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_05195 PF03466 LysR substrate binding domain D1103_05215 PF01197 Ribosomal protein L31 D1103_05220 PF00456 Transketolase, thiamine diphosphate binding domain D1103_05220 PF02780 Transketolase, C-terminal domain D1103_05220 PF02779 Transketolase, pyrimidine binding domain D1103_05225 PF00183 Hsp90 protein D1103_05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_05230 PF06628 Catalase-related immune-responsive D1103_05230 PF00199 Catalase D1103_05240 PF00149 Calcineurin-like phosphoesterase D1103_05245 PF03477 ATP cone domain D1103_05245 PF00317 Ribonucleotide reductase, all-alpha domain D1103_05245 PF02867 Ribonucleotide reductase, barrel domain D1103_05250 PF00268 Ribonucleotide reductase, small chain D1103_05255 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D1103_05255 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D1103_05260 PF00288 GHMP kinases N terminal domain D1103_05260 PF08544 GHMP kinases C terminal D1103_05260 PF10509 Galactokinase galactose-binding signature D1103_05265 PF01263 Aldose 1-epimerase D1103_05270 PF16353 Domain of unknown function(DUF4981) D1103_05270 PF02929 Beta galactosidase small chain D1103_05270 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1103_05270 PF00703 Glycosyl hydrolases family 2 D1103_05270 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1103_05290 PF06594 Haemolysin-type calcium binding protein related domain D1103_05290 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1103_05300 PF10609 NUBPL iron-transfer P-loop NTPase D1103_05305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_05310 PF01914 MarC family integral membrane protein D1103_05315 PF13145 PPIC-type PPIASE domain D1103_05320 PF00999 Sodium/hydrogen exchanger family D1103_05325 PF00312 Ribosomal protein S15 D1103_05330 PF05661 Protein of unknown function (DUF808) D1103_05335 PF07219 HemY protein N-terminus D1103_05340 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D1103_05350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1103_05350 PF03900 Porphobilinogen deaminase, C-terminal domain D1103_05355 PF00465 Iron-containing alcohol dehydrogenase D1103_05355 PF00171 Aldehyde dehydrogenase family D1103_05360 PF00118 TCP-1/cpn60 chaperonin family D1103_05365 PF00166 Chaperonin 10 Kd subunit D1103_05370 PF01048 Phosphorylase superfamily D1103_05375 PF01791 DeoC/LacD family aldolase D1103_05380 PF01773 Na+ dependent nucleoside transporter N-terminus D1103_05380 PF07662 Na+ dependent nucleoside transporter C-terminus D1103_05380 PF07670 Nucleoside recognition D1103_05390 PF01081 KDPG and KHG aldolase D1103_05395 PF00294 pfkB family carbohydrate kinase D1103_05400 PF02614 Glucuronate isomerase D1103_05415 PF00392 Bacterial regulatory proteins, gntR family D1103_05415 PF07729 FCD domain D1103_05425 PF01641 SelR domain D1103_05425 PF08534 Redoxin D1103_05425 PF01625 Peptide methionine sulfoxide reductase D1103_05430 PF00535 Glycosyl transferase family 2 D1103_05435 PF00535 Glycosyl transferase family 2 D1103_05445 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1103_05455 PF04230 Polysaccharide pyruvyl transferase D1103_05460 PF02698 DUF218 domain D1103_05465 PF17764 3′ DNA-binding domain (3′BD) D1103_05465 PF00271 Helicase conserved C-terminal domain D1103_05465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1103_05465 PF18074 Primosomal protein N C-terminal domain D1103_05465 PF00270 DEAD/DEAH box helicase D1103_05470 PF00800 Prephenate dehydratase D1103_05470 PF01817 Chorismate mutase type II D1103_05475 PF01432 Peptidase family M3 D1103_05480 PF04055 Radical SAM superfamily D1103_05485 PF01228 Glycine radical D1103_05485 PF02901 Pyruvate formate lyase-like D1103_05490 PF01226 Formate/nitrite transporter D1103_05500 PF01435 Peptidase family M48 D1103_05505 PF11798 IMS family HHH motif D1103_05505 PF00817 impB/mucB/samB family D1103_05505 PF11799 impB/mucB/samB family C-terminal domain D1103_05510 PF03956 Lysine exporter LysO D1103_05515 PF00425 chorismate binding enzyme D1103_05520 PF00155 Aminotransferase class I and II D1103_05525 PF00892 EamA-like transporter family D1103_05530 PF00892 EamA-like transporter family D1103_05535 PF01810 LysE type translocator D1103_05540 PF07715 TonB-dependent Receptor Plug Domain D1103_05540 PF04886 PT repeat D1103_05540 PF00593 TonB dependent receptor D1103_05545 PF01243 Pyridoxamine 5'-phosphate oxidase D1103_05555 PF03918 Cytochrome C biogenesis protein D1103_05560 PF08534 Redoxin D1103_05565 PF01578 Cytochrome C assembly protein D1103_05565 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1103_05570 PF02254 TrkA-N domain D1103_05570 PF00999 Sodium/hydrogen exchanger family D1103_05575 PF12633 Adenylate cyclase NT domain D1103_05575 PF01295 Adenylate cyclase, class-I D1103_05580 PF02801 Beta-ketoacyl synthase, C-terminal domain D1103_05580 PF00109 Beta-ketoacyl synthase, N-terminal domain D1103_05590 PF04076 Bacterial OB fold (BOF) protein D1103_05605 PF00486 Transcriptional regulatory protein, C terminal D1103_05605 PF00072 Response regulator receiver domain D1103_05610 PF00512 His Kinase A (phospho-acceptor) domain D1103_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_05610 PF08521 Two-component sensor kinase N-terminal D1103_05615 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D1103_05620 PF02699 Preprotein translocase subunit D1103_05625 PF13721 SecD export protein N-terminal TM region D1103_05625 PF02355 Protein export membrane protein D1103_05625 PF07549 SecD/SecF GG Motif D1103_05630 PF02355 Protein export membrane protein D1103_05630 PF07549 SecD/SecF GG Motif D1103_05635 PF00210 Ferritin-like domain D1103_05640 PF00210 Ferritin-like domain D1103_05645 PF00860 Permease family D1103_05650 PF02545 Maf-like protein D1103_05665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_05665 PF03466 LysR substrate binding domain D1103_05680 PF13173 AAA domain D1103_05680 PF13635 Domain of unknown function (DUF4143) D1103_05700 PF02926 THUMP domain D1103_05700 PF02568 Thiamine biosynthesis protein (ThiI) D1103_05705 PF00709 Adenylosuccinate synthetase D1103_05710 PF01145 SPFH domain / Band 7 family D1103_05715 PF01145 SPFH domain / Band 7 family D1103_05720 PF00085 Thioredoxin D1103_05725 PF00860 Permease family D1103_05730 PF02772 S-adenosylmethionine synthetase, central domain D1103_05730 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1103_05730 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1103_05740 PF13520 Amino acid permease D1103_05745 PF13520 Amino acid permease D1103_05755 PF01546 Peptidase family M20/M25/M40 D1103_05755 PF07687 Peptidase dimerisation domain D1103_05760 PF03922 OmpW family D1103_05765 PF10431 C-terminal, D2-small domain, of ClpB protein D1103_05765 PF02861 Clp amino terminal domain, pathogenicity island component D1103_05765 PF17871 AAA lid domain D1103_05765 PF07724 AAA domain (Cdc48 subfamily) D1103_05765 PF00004 ATPase family associated with various cellular activities (AAA) D1103_05770 PF01758 Sodium Bile acid symporter family D1103_05775 PF03960 ArsC family D1103_05785 PF00206 Lyase D1103_05785 PF10415 Fumarase C C-terminus D1103_05795 PF02769 AIR synthase related protein, C-terminal domain D1103_05795 PF00586 AIR synthase related protein, N-terminal domain D1103_05800 PF07501 G5 domain D1103_05800 PF04650 YSIRK type signal peptide D1103_05800 PF00728 Glycosyl hydrolase family 20, catalytic domain D1103_05800 PF00746 LPXTG cell wall anchor motif D1103_05805 PF06508 Queuosine biosynthesis protein QueC D1103_05810 PF01242 6-pyruvoyl tetrahydropterin synthase D1103_05815 PF04055 Radical SAM superfamily D1103_05830 PF02789 Cytosol aminopeptidase family, N-terminal domain D1103_05830 PF00883 Cytosol aminopeptidase family, catalytic domain D1103_05840 PF03739 Lipopolysaccharide export system permease LptF/LptG D1103_05845 PF03739 Lipopolysaccharide export system permease LptF/LptG D1103_05850 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1103_05850 PF14579 Helix-hairpin-helix motif D1103_05850 PF01336 OB-fold nucleic acid binding domain D1103_05850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1103_05850 PF02811 PHP domain D1103_05870 PF01370 NAD dependent epimerase/dehydratase family D1103_05870 PF02222 ATP-grasp domain D1103_05875 PF01553 Acyltransferase D1103_05880 PF01726 LexA DNA binding domain D1103_05880 PF00717 Peptidase S24-like D1103_05885 PF02976 DNA mismatch repair enzyme MutH D1103_05890 PF03741 Integral membrane protein TerC family D1103_05895 PF00933 Glycosyl hydrolase family 3 N terminal domain D1103_05900 PF05958 tRNA (Uracil-5-)-methyltransferase D1103_05905 PF03952 Enolase, N-terminal domain D1103_05905 PF00113 Enolase, C-terminal TIM barrel domain D1103_05910 PF00293 NUDIX domain D1103_05915 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) D1103_05920 PF09382 RQC domain D1103_05920 PF16124 RecQ zinc-binding D1103_05920 PF00570 HRDC domain D1103_05920 PF00271 Helicase conserved C-terminal domain D1103_05920 PF00270 DEAD/DEAH box helicase D1103_05925 PF01491 Frataxin-like domain D1103_05930 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1103_05935 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1103_05940 PF00814 Glycoprotease family D1103_05945 PF13525 Outer membrane lipoprotein D1103_05950 PF00849 RNA pseudouridylate synthase D1103_05950 PF01479 S4 domain D1103_05955 PF14256 YwiC-like protein D1103_05960 PF00365 Phosphofructokinase D1103_05965 PF00266 Aminotransferase class-V D1103_05970 PF00565 Staphylococcal nuclease homologue D1103_05975 PF01235 Sodium:alanine symporter family D1103_05980 PF01594 AI-2E family transporter D1103_05990 PF01136 Peptidase family U32 D1103_05990 PF16325 Peptidase family U32 C-terminal domain D1103_05995 PF04932 O-Antigen ligase D1103_06000 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1103_06000 PF00534 Glycosyl transferases group 1 D1103_06005 PF01467 Cytidylyltransferase-like D1103_06010 PF00929 Exonuclease D1103_06015 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1103_06020 PF01520 N-acetylmuramoyl-L-alanine amidase D1103_06020 PF01476 LysM domain D1103_06025 PF00342 Phosphoglucose isomerase D1103_06030 PF04380 Membrane fusogenic activity D1103_06055 PF08501 Shikimate dehydrogenase substrate binding domain D1103_06055 PF01488 Shikimate / quinate 5-dehydrogenase D1103_06055 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1103_06060 PF01300 Telomere recombination D1103_06065 PF01396 Topoisomerase DNA binding C4 zinc finger D1103_06070 PF04266 ASCH domain D1103_06075 PF02631 RecX family D1103_06080 PF00154 recA bacterial DNA recombination protein D1103_06085 PF01063 Amino-transferase class IV D1103_06090 PF00425 chorismate binding enzyme D1103_06095 PF02646 RmuC family D1103_06100 PF00117 Glutamine amidotransferase class-I D1103_06105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1103_06105 PF03625 Domain of unknown function DUF302 D1103_06110 PF01336 OB-fold nucleic acid binding domain D1103_06110 PF02938 GAD domain D1103_06110 PF00152 tRNA synthetases class II (D, K and N) D1103_06115 PF00293 NUDIX domain D1103_06120 PF01709 Transcriptional regulator D1103_06130 PF02075 Crossover junction endodeoxyribonuclease RuvC D1103_06135 PF05193 Peptidase M16 inactive domain D1103_06135 PF00675 Insulinase (Peptidase family M16) D1103_06140 PF01717 Cobalamin-independent synthase, Catalytic domain D1103_06140 PF08267 Cobalamin-independent synthase, N-terminal domain D1103_06145 PF00939 Sodium:sulfate symporter transmembrane region D1103_06150 PF03466 LysR substrate binding domain D1103_06150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_06155 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1103_06165 PF01479 S4 domain D1103_06165 PF00849 RNA pseudouridylate synthase D1103_06170 PF01300 Telomere recombination D1103_06180 PF04261 Dyp-type peroxidase family D1103_06185 PF00425 chorismate binding enzyme D1103_06185 PF04715 Anthranilate synthase component I, N terminal region D1103_06190 PF00117 Glutamine amidotransferase class-I D1103_06195 PF00591 Glycosyl transferase family, a/b domain D1103_06195 PF02885 Glycosyl transferase family, helical bundle domain D1103_06200 PF08241 Methyltransferase domain D1103_06205 PF16036 Chalcone isomerase-like D1103_06210 PF04325 Protein of unknown function (DUF465) D1103_06215 PF01281 Ribosomal protein L9, N-terminal domain D1103_06215 PF03948 Ribosomal protein L9, C-terminal domain D1103_06220 PF01084 Ribosomal protein S18 D1103_06225 PF00436 Single-strand binding protein family D1103_06230 PF01250 Ribosomal protein S6 D1103_06235 PF02843 Phosphoribosylglycinamide synthetase, C domain D1103_06235 PF02844 Phosphoribosylglycinamide synthetase, N domain D1103_06235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1103_06240 PF04973 Nicotinamide mononucleotide transporter D1103_06245 PF09976 Tetratricopeptide repeat-like domain D1103_06250 PF13393 Histidyl-tRNA synthetase D1103_06250 PF03129 Anticodon binding domain D1103_06255 PF04551 GcpE protein D1103_06260 PF13464 Domain of unknown function (DUF4115) D1103_06265 PF01740 STAS domain D1103_06265 PF00916 Sulfate permease family D1103_06270 PF14698 Argininosuccinate lyase C-terminal D1103_06270 PF00206 Lyase D1103_06275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D1103_06275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D1103_06280 PF00999 Sodium/hydrogen exchanger family D1103_06280 PF02254 TrkA-N domain D1103_06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_06295 PF03466 LysR substrate binding domain D1103_06315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_06315 PF03466 LysR substrate binding domain D1103_06320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1103_06325 PF00296 Luciferase-like monooxygenase D1103_06330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1103_06330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1103_06335 PF00881 Nitroreductase family D1103_06340 PF01914 MarC family integral membrane protein D1103_06345 PF03852 DNA mismatch endonuclease Vsr D1103_06355 PF00145 C-5 cytosine-specific DNA methylase D1103_06365 PF00756 Putative esterase D1103_06370 PF02798 Glutathione S-transferase, N-terminal domain D1103_06385 PF08240 Alcohol dehydrogenase GroES-like domain D1103_06385 PF00107 Zinc-binding dehydrogenase D1103_06390 PF02028 BCCT, betaine/carnitine/choline family transporter D1103_06405 PF03595 Voltage-dependent anion channel D1103_06410 PF13419 Haloacid dehalogenase-like hydrolase D1103_06425 PF00005 ABC transporter D1103_06425 PF00664 ABC transporter transmembrane region D1103_06430 PF02664 S-Ribosylhomocysteinase (LuxS) D1103_06435 PF02470 MlaD protein D1103_06440 PF01475 Ferric uptake regulator family D1103_06445 PF00258 Flavodoxin D1103_06450 PF01402 Ribbon-helix-helix protein, copG family D1103_06455 PF04073 Aminoacyl-tRNA editing domain D1103_06465 PF00860 Permease family D1103_06470 PF02635 DsrE/DsrF-like family D1103_06480 PF01176 Translation initiation factor 1A / IF-1 D1103_06485 PF10144 Bacterial virulence factor haemolysin D1103_06490 PF18429 Domain of unknown function (DUF5609) D1103_06495 PF04461 Protein of unknown function (DUF520) D1103_06505 PF00343 Carbohydrate phosphorylase D1103_06510 PF17874 MalT-like TPR region D1103_06510 PF00196 Bacterial regulatory proteins, luxR family D1103_06515 PF07148 Maltose operon periplasmic protein precursor (MalM) D1103_06520 PF02264 LamB porin D1103_06525 PF17912 MalK OB fold domain D1103_06525 PF00005 ABC transporter D1103_06530 PF01547 Bacterial extracellular solute-binding protein D1103_06535 PF14785 Maltose transport system permease protein MalF P2 domain D1103_06535 PF00528 Binding-protein-dependent transport system inner membrane component D1103_06540 PF00528 Binding-protein-dependent transport system inner membrane component D1103_06545 PF02446 4-alpha-glucanotransferase D1103_06550 PF02554 Carbon starvation protein CstA D1103_06555 PF01026 TatD related DNase D1103_06560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1103_06560 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1103_06565 PF03350 Uncharacterized protein family, UPF0114 D1103_06570 PF00881 Nitroreductase family D1103_06585 PF00005 ABC transporter D1103_06590 PF01116 Fructose-bisphosphate aldolase class-II D1103_06595 PF00162 Phosphoglycerate kinase D1103_06600 PF00939 Sodium:sulfate symporter transmembrane region D1103_06605 PF00939 Sodium:sulfate symporter transmembrane region D1103_06610 PF00939 Sodium:sulfate symporter transmembrane region D1103_06615 PF00204 DNA gyrase B D1103_06615 PF00986 DNA gyrase B subunit, carboxyl terminus D1103_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_06615 PF01751 Toprim domain D1103_06620 PF00512 His Kinase A (phospho-acceptor) domain D1103_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1103_06625 PF00072 Response regulator receiver domain D1103_06625 PF00486 Transcriptional regulatory protein, C terminal D1103_06630 PF00005 ABC transporter D1103_06640 PF00528 Binding-protein-dependent transport system inner membrane component D1103_06645 PF12849 PBP superfamily domain D1103_06650 PF09278 MerR, DNA binding D1103_06650 PF00376 MerR family regulatory protein D1103_06660 PF00403 Heavy-metal-associated domain D1103_06665 PF00403 Heavy-metal-associated domain D1103_06670 PF00106 short chain dehydrogenase D1103_06675 PF00881 Nitroreductase family D1103_06680 PF01343 Peptidase family S49 D1103_06685 PF00445 Ribonuclease T2 family D1103_06690 PF10263 SprT-like family D1103_06690 PF17283 SprT-like zinc ribbon domain D1103_06695 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1103_06700 PF17674 HHH domain D1103_06700 PF00575 S1 RNA binding domain D1103_06700 PF16921 Tex protein YqgF-like domain D1103_06700 PF09371 Tex-like protein N-terminal domain D1103_06710 PF04055 Radical SAM superfamily D1103_06735 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1103_06745 PF13356 Arm DNA-binding domain D1103_06745 PF00589 Phage integrase family D1103_06775 PF03592 Terminase small subunit D1103_06805 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D1103_06810 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D1103_06815 PF03966 Trm112p-like protein D1103_06820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1103_06825 PF06689 ClpX C4-type zinc finger D1103_06825 PF07724 AAA domain (Cdc48 subfamily) D1103_06825 PF10431 C-terminal, D2-small domain, of ClpB protein D1103_06830 PF00574 Clp protease D1103_06835 PF02657 Fe-S metabolism associated domain D1103_06850 PF00929 Exonuclease D1103_06855 PF12848 ABC transporter D1103_06855 PF00005 ABC transporter D1103_06860 PF02627 Carboxymuconolactone decarboxylase family D1103_06875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1103_06880 PF01722 BolA-like protein D1103_06890 PF05494 MlaC protein D1103_06895 PF02470 MlaD protein D1103_06900 PF02405 Permease MlaE D1103_06905 PF00005 ABC transporter D1103_06910 PF00595 PDZ domain D1103_06915 PF01370 NAD dependent epimerase/dehydratase family D1103_06915 PF08338 Domain of unknown function (DUF1731) D1103_06920 PF01316 Arginine repressor, DNA binding domain D1103_06920 PF02863 Arginine repressor, C-terminal domain D1103_06925 PF00056 lactate/malate dehydrogenase, NAD binding domain D1103_06925 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1103_06935 PF05191 Adenylate kinase, active site lid D1103_06945 PF07690 Major Facilitator Superfamily D1103_06950 PF01370 NAD dependent epimerase/dehydratase family D1103_06955 PF00533 BRCA1 C Terminus (BRCT) domain D1103_06955 PF03120 NAD-dependent DNA ligase OB-fold domain D1103_06955 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1103_06955 PF12826 Helix-hairpin-helix motif D1103_06955 PF01653 NAD-dependent DNA ligase adenylation domain D1103_06960 PF04354 ZipA, C-terminal FtsZ-binding domain D1103_06975 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D1103_06975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1103_06985 PF07690 Major Facilitator Superfamily D1103_06990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1103_06995 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1103_06995 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1103_07000 PF00459 Inositol monophosphatase family D1103_07005 PF00293 NUDIX domain D1103_07010 PF01479 S4 domain D1103_07015 PF01430 Hsp33 protein D1103_07020 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1103_07025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1103_07025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1103_07030 PF00696 Amino acid kinase family D1103_07035 PF02378 Phosphotransferase system, EIIC D1103_07035 PF00367 phosphotransferase system, EIIB D1103_07040 PF00005 ABC transporter D1103_07045 PF00528 Binding-protein-dependent transport system inner membrane component D1103_07050 PF00381 PTS HPr component phosphorylation site D1103_07055 PF05524 PEP-utilising enzyme, N-terminal D1103_07055 PF02896 PEP-utilising enzyme, TIM barrel domain D1103_07055 PF00391 PEP-utilising enzyme, mobile domain D1103_07060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1103_07065 PF04055 Radical SAM superfamily D1103_07065 PF01938 TRAM domain D1103_07065 PF00919 Uncharacterized protein family UPF0004 D1103_07070 PF13361 UvrD-like helicase C-terminal domain D1103_07070 PF00580 UvrD/REP helicase N-terminal domain D1103_07075 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1103_07080 PF01924 Hydrogenase formation hypA family D1103_07085 PF00586 AIR synthase related protein, N-terminal domain D1103_07085 PF02769 AIR synthase related protein, C-terminal domain D1103_07090 PF01300 Telomere recombination D1103_07090 PF07503 HypF finger D1103_07090 PF17788 HypF Kae1-like domain D1103_07090 PF00708 Acylphosphatase D1103_07095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1103_07095 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D1103_07100 PF13247 4Fe-4S dicluster domain D1103_07105 PF03916 Polysulphide reductase, NrfD D1103_07110 PF00374 Nickel-dependent hydrogenase D1103_07115 PF01750 Hydrogenase maturation protease D1103_07120 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D1103_07125 PF01455 HupF/HypC family D1103_07130 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D1103_07155 PF00271 Helicase conserved C-terminal domain D1103_07155 PF17757 UvrB interaction domain D1103_07155 PF00270 DEAD/DEAH box helicase D1103_07155 PF03461 TRCF domain D1103_07155 PF02559 CarD-like/TRCF domain D1103_07160 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1103_07160 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1103_07160 PF01433 Peptidase family M1 domain D1103_07165 PF02660 Glycerol-3-phosphate acyltransferase D1103_07170 PF02152 Dihydroneopterin aldolase D1103_07175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1103_07175 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D1103_07180 PF18075 FtsX extracellular domain D1103_07185 PF00005 ABC transporter D1103_07190 PF02881 SRP54-type protein, helical bundle domain D1103_07190 PF00448 SRP54-type protein, GTPase domain D1103_07200 PF04269 Protein of unknown function, DUF440 D1103_07205 PF01613 Flavin reductase like domain D1103_07210 PF03848 Tellurite resistance protein TehB D1103_07210 PF09313 Domain of unknown function (DUF1971) D1103_07215 PF00528 Binding-protein-dependent transport system inner membrane component D1103_07220 PF00528 Binding-protein-dependent transport system inner membrane component D1103_07225 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1103_07230 PF00005 ABC transporter D1103_07240 PF01699 Sodium/calcium exchanger protein D1103_07245 PF01381 Helix-turn-helix D1103_07255 PF13098 Thioredoxin-like domain D1103_07255 PF02683 Cytochrome C biogenesis protein transmembrane region D1103_07255 PF11412 Disulphide bond corrector protein DsbC D1103_07260 PF04315 Elongation factor P hydroxylase D1103_07265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1103_07270 PF04348 LppC putative lipoprotein D1103_07275 PF02021 Uncharacterised protein family UPF0102 D1103_07280 PF13580 SIS domain D1103_07285 PF04972 BON domain D1103_07290 PF01464 Transglycosylase SLT domain D1103_07290 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1103_07310 PF01578 Cytochrome C assembly protein D1103_07310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1103_07315 PF03100 CcmE D1103_07320 PF04995 Heme exporter protein D (CcmD) D1103_07325 PF01578 Cytochrome C assembly protein D1103_07330 PF03379 CcmB protein D1103_07335 PF00005 ABC transporter D1103_07340 PF00308 Bacterial dnaA protein D1103_07375 PF04277 Oxaloacetate decarboxylase, gamma chain D1103_07380 PF02436 Conserved carboxylase domain D1103_07380 PF00364 Biotin-requiring enzyme D1103_07380 PF00682 HMGL-like D1103_07385 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D1103_07390 PF08274 PhnA Zinc-Ribbon D1103_07390 PF03831 PhnA domain D1103_07395 PF14376 Haem-binding domain D1103_07395 PF00034 Cytochrome c D1103_07395 PF03150 Di-haem cytochrome c peroxidase D1103_07400 PF02594 Uncharacterised ACR, YggU family COG1872 D1103_07405 PF02325 YGGT family D1103_07410 PF04320 Protein with unknown function (DUF469) D1103_07415 PF02390 Putative methyltransferase D1103_07420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1103_07420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1103_07425 PF02504 Fatty acid synthesis protein D1103_07430 PF01783 Ribosomal L32p protein family D1103_07435 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1103_07440 PF01578 Cytochrome C assembly protein D1103_07445 PF03471 Transporter associated domain D1103_07445 PF01595 Cyclin M transmembrane N-terminal domain D1103_07445 PF00571 CBS domain D1103_07450 PF00209 Sodium:neurotransmitter symporter family D1103_07460 PF03610 PTS system fructose IIA component D1103_07460 PF03830 PTS system sorbose subfamily IIB component D1103_07465 PF03609 PTS system sorbose-specific iic component D1103_07470 PF03613 PTS system mannose/fructose/sorbose family IID component D1103_07475 PF06173 Protein of unknown function (DUF986) D1103_07480 PF01238 Phosphomannose isomerase type I D1103_07495 PF03412 Peptidase C39 family D1103_07495 PF00005 ABC transporter D1103_07495 PF00664 ABC transporter transmembrane region D1103_07500 PF08339 RTX C-terminal domain D1103_07500 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1103_07500 PF02382 N-terminal domain in RTX protein D1103_07505 PF02794 RTX toxin acyltransferase family D1103_07520 PF08402 TOBE domain D1103_07520 PF00005 ABC transporter D1103_07525 PF02875 Mur ligase family, glutamate ligase domain D1103_07525 PF08245 Mur ligase middle domain D1103_07525 PF01225 Mur ligase family, catalytic domain D1103_07530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D1103_07540 PF04542 Sigma-70 region 2 D1103_07540 PF04545 Sigma-70, region 4 D1103_07540 PF00140 Sigma-70 factor, region 1.2 D1103_07540 PF03979 Sigma-70 factor, region 1.1 D1103_07540 PF04546 Sigma-70, non-essential region D1103_07540 PF04539 Sigma-70 region 3 D1103_07545 PF10410 DnaB-helicase binding domain of primase D1103_07545 PF08275 DNA primase catalytic core, N-terminal domain D1103_07545 PF01807 CHC2 zinc finger D1103_07545 PF08278 DNA primase DnaG DnaB-binding D1103_07550 PF01165 Ribosomal protein S21 D1103_07555 PF16363 GDP-mannose 4,6 dehydratase D1103_07560 PF02397 Bacterial sugar transferase D1103_07570 PF00535 Glycosyl transferase family 2 D1103_07580 PF03275 UDP-galactopyranose mutase D1103_07590 PF00005 ABC transporter D1103_07595 PF01061 ABC-2 type transporter D1103_07600 PF01521 Iron-sulphur cluster biosynthesis D1103_07605 PF01040 UbiA prenyltransferase family D1103_07615 PF01980 tRNA-methyltransferase O D1103_07615 PF18389 TrmO C-terminal domain D1103_07625 PF00230 Major intrinsic protein D1103_07630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1103_07635 PF00585 C-terminal regulatory domain of Threonine dehydratase D1103_07635 PF00291 Pyridoxal-phosphate dependent enzyme D1103_07640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1103_07640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1103_07640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1103_07640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1103_07645 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1103_07650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1103_07650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1103_07660 PF00579 tRNA synthetases class I (W and Y) D1103_07660 PF01479 S4 domain D1103_07670 PF08461 Ribonuclease R winged-helix domain D1103_07670 PF08206 Ribonuclease B OB domain D1103_07670 PF00773 RNB domain D1103_07670 PF00575 S1 RNA binding domain D1103_07670 PF17876 Cold shock domain D1103_07675 PF00578 AhpC/TSA family D1103_07680 PF00440 Bacterial regulatory proteins, tetR family D1103_07685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_07685 PF03466 LysR substrate binding domain D1103_07690 PF00462 Glutaredoxin D1103_07690 PF08534 Redoxin D1103_07705 PF01297 Zinc-uptake complex component A periplasmic D1103_07710 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D1103_07715 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D1103_07725 PF00575 S1 RNA binding domain D1103_07725 PF10150 Ribonuclease E/G family D1103_07725 PF12111 Polyribonucleotide phosphorylase C terminal D1103_07740 PF02525 Flavodoxin-like fold D1103_07745 PF12838 4Fe-4S dicluster domain D1103_07745 PF13187 4Fe-4S dicluster domain D1103_07755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1103_07755 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1103_07755 PF00384 Molybdopterin oxidoreductase D1103_07755 PF01568 Molydopterin dinucleotide binding domain D1103_07760 PF12800 4Fe-4S binding domain D1103_07760 PF12838 4Fe-4S dicluster domain D1103_07765 PF12837 4Fe-4S binding domain D1103_07765 PF12801 4Fe-4S binding domain D1103_07770 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D1103_07775 PF03264 NapC/NirT cytochrome c family, N-terminal region D1103_07780 PF02096 60Kd inner membrane protein D1103_07780 PF14849 YidC periplasmic domain D1103_07785 PF03061 Thioesterase superfamily D1103_07790 PF02913 FAD linked oxidases, C-terminal domain D1103_07790 PF01565 FAD binding domain D1103_07790 PF13183 4Fe-4S dicluster domain D1103_07795 PF01389 OmpA-like transmembrane domain D1103_07795 PF00691 OmpA family D1103_07800 PF13407 Periplasmic binding protein domain D1103_07805 PF00005 ABC transporter D1103_07810 PF02653 Branched-chain amino acid transport system / permease component D1103_07830 PF06039 Malate:quinone oxidoreductase (Mqo) D1103_07835 PF00501 AMP-binding enzyme D1103_07840 PF00248 Aldo/keto reductase family D1103_07845 PF04175 Protein of unknown function (DUF406) D1103_07850 PF03222 Tryptophan/tyrosine permease family D1103_07860 PF04262 Glutamate-cysteine ligase D1103_07860 PF18419 ATP-grasp-like domain D1103_07860 PF02655 ATP-grasp domain D1103_07865 PF02666 Phosphatidylserine decarboxylase D1103_07875 PF08525 Opacity-associated protein A N-terminal motif D1103_07875 PF04225 Opacity-associated protein A LysM-like domain D1103_07885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1103_07890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1103_07895 PF00164 Ribosomal protein S12/S23 D1103_07900 PF00177 Ribosomal protein S7p/S5e D1103_07905 PF03144 Elongation factor Tu domain 2 D1103_07905 PF00009 Elongation factor Tu GTP binding domain D1103_07905 PF03764 Elongation factor G, domain IV D1103_07905 PF14492 Elongation Factor G, domain II D1103_07905 PF00679 Elongation factor G C-terminus D1103_07910 PF03143 Elongation factor Tu C-terminal domain D1103_07910 PF03144 Elongation factor Tu domain 2 D1103_07910 PF00009 Elongation factor Tu GTP binding domain D1103_07930 PF08543 Phosphomethylpyrimidine kinase D1103_07940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1103_07945 PF07731 Multicopper oxidase D1103_07945 PF07732 Multicopper oxidase D1103_07950 PF01553 Acyltransferase D1103_07955 PF08534 Redoxin D1103_07960 PF01926 50S ribosome-binding GTPase D1103_07960 PF12631 MnmE helical domain D1103_07960 PF10396 GTP-binding protein TrmE N-terminus D1103_07965 PF05167 Uncharacterised ACR (DUF711) D1103_07975 PF17954 Quercetinase C-terminal cupin domain D1103_07975 PF02678 Pirin D1103_07980 PF00210 Ferritin-like domain D1103_07995 PF12805 FUSC-like inner membrane protein yccS D1103_08000 PF02142 MGS-like domain D1103_08005 PF00291 Pyridoxal-phosphate dependent enzyme D1103_08005 PF14821 Threonine synthase N terminus D1103_08015 PF10458 Valyl tRNA synthetase tRNA binding arm D1103_08015 PF00133 tRNA synthetases class I (I, L, M and V) D1103_08015 PF08264 Anticodon-binding domain of tRNA D1103_08025 PF13673 Acetyltransferase (GNAT) domain D1103_08030 PF04364 DNA polymerase III chi subunit, HolC D1103_08035 PF01476 LysM domain D1103_08040 PF05697 Bacterial trigger factor protein (TF) D1103_08040 PF05698 Bacterial trigger factor protein (TF) C-terminus D1103_08040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1103_08045 PF00581 Rhodanese-like domain D1103_08050 PF02556 Preprotein translocase subunit SecB D1103_08055 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1103_08055 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1103_08060 PF06426 Serine acetyltransferase, N-terminal D1103_08060 PF00132 Bacterial transferase hexapeptide (six repeats) D1103_08065 PF03144 Elongation factor Tu domain 2 D1103_08065 PF00009 Elongation factor Tu GTP binding domain D1103_08065 PF03143 Elongation factor Tu C-terminal domain D1103_08090 PF00485 Phosphoribulokinase / Uridine kinase family D1103_08095 PF08534 Redoxin D1103_08100 PF03918 Cytochrome C biogenesis protein D1103_08105 PF03918 Cytochrome C biogenesis protein D1103_08110 PF00994 Probable molybdopterin binding domain D1103_08115 PF00543 Nitrogen regulatory protein P-II D1103_08120 PF01252 Signal peptidase (SPase) II D1103_08125 PF02401 LytB protein D1103_08130 PF03937 Flavinator of succinate dehydrogenase D1103_08140 PF04055 Radical SAM superfamily D1103_08145 PF00043 Glutathione S-transferase, C-terminal domain D1103_08145 PF02798 Glutathione S-transferase, N-terminal domain D1103_08150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1103_08150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1103_08160 PF02313 Fumarate reductase subunit D D1103_08165 PF02300 Fumarate reductase subunit C D1103_08170 PF13085 2Fe-2S iron-sulfur cluster binding domain D1103_08170 PF13183 4Fe-4S dicluster domain D1103_08175 PF00890 FAD binding domain D1103_08175 PF02910 Fumarate reductase flavoprotein C-term D1103_08180 PF00152 tRNA synthetases class II (D, K and N) D1103_08185 PF01678 Diaminopimelate epimerase D1103_08190 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1103_08195 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1103_08205 PF03702 Anhydro-N-acetylmuramic acid kinase D1103_08210 PF01380 SIS domain D1103_08230 PF01523 Putative modulator of DNA gyrase D1103_08235 PF11734 TilS substrate C-terminal domain D1103_08235 PF09179 TilS substrate binding domain D1103_08235 PF01171 PP-loop family D1103_08250 PF00589 Phage integrase family D1103_08250 PF02899 Phage integrase, N-terminal SAM-like domain D1103_08310 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1103_08315 PF06899 WzyE protein, O-antigen assembly polymerase D1103_08320 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D1103_08325 PF03063 Prismane/CO dehydrogenase family D1103_08330 PF00175 Oxidoreductase NAD-binding domain D1103_08330 PF00970 Oxidoreductase FAD-binding domain D1103_08330 PF00111 2Fe-2S iron-sulfur cluster binding domain D1103_08340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1103_08350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1103_08350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1103_08350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1103_08355 PF02350 UDP-N-acetylglucosamine 2-epimerase D1103_08365 PF00953 Glycosyl transferase family 4 D1103_08370 PF00202 Aminotransferase class-III D1103_08380 PF03023 Lipid II flippase MurJ D1103_08385 PF01649 Ribosomal protein S20 D1103_08390 PF02254 TrkA-N domain D1103_08390 PF02080 TrkA-C domain D1103_08395 PF01189 16S rRNA methyltransferase RsmB/F D1103_08395 PF01029 NusB family D1103_08400 PF00009 Elongation factor Tu GTP binding domain D1103_08400 PF09106 Elongation factor SelB, winged helix D1103_08400 PF09107 Elongation factor SelB, winged helix D1103_08400 PF03144 Elongation factor Tu domain 2 D1103_08405 PF12390 Selenocysteine synthase N terminal D1103_08405 PF03841 L-seryl-tRNA selenium transferase D1103_08415 PF00258 Flavodoxin D1103_08440 PF00593 TonB dependent receptor D1103_08440 PF07715 TonB-dependent Receptor Plug Domain D1103_08445 PF17484 N-Lobe handle Tf-binding protein B D1103_08445 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1103_08445 PF17483 C-lobe handle domain of Tf-binding protein B D1103_08450 PF02472 Biopolymer transport protein ExbD/TolR D1103_08455 PF01618 MotA/TolQ/ExbB proton channel family D1103_08465 PF03956 Lysine exporter LysO D1103_08480 PF06821 Serine hydrolase D1103_08485 PF17311 Family of unknown function (DUF5358) D1103_08490 PF01380 SIS domain D1103_08490 PF00571 CBS domain D1103_08495 PF02348 Cytidylyltransferase D1103_08500 PF00793 DAHP synthetase I family D1103_08510 PF05159 Capsule polysaccharide biosynthesis protein D1103_08515 PF00132 Bacterial transferase hexapeptide (six repeats) D1103_08520 PF00483 Nucleotidyl transferase D1103_08520 PF01050 Mannose-6-phosphate isomerase D1103_08525 PF02563 Polysaccharide biosynthesis/export protein D1103_08535 PF01061 ABC-2 type transporter D1103_08540 PF00005 ABC transporter D1103_08545 PF00005 ABC transporter D1103_08550 PF02911 Formyl transferase, C-terminal domain D1103_08550 PF00551 Formyl transferase D1103_08560 PF09186 Domain of unknown function (DUF1949) D1103_08560 PF01205 Uncharacterized protein family UPF0029 D1103_08565 PF02386 Cation transport protein D1103_08570 PF12724 Flavodoxin domain D1103_08575 PF01741 Large-conductance mechanosensitive channel, MscL D1103_08580 PF04055 Radical SAM superfamily D1103_08585 PF03099 Biotin/lipoate A/B protein ligase family D1103_08590 PF04359 Protein of unknown function (DUF493) D1103_08595 PF07943 Penicillin-binding protein 5, C-terminal domain D1103_08595 PF00768 D-alanyl-D-alanine carboxypeptidase D1103_08600 PF03330 Lytic transglycolase D1103_08605 PF01098 Cell cycle protein D1103_08610 PF03717 Penicillin-binding Protein dimerisation domain D1103_08610 PF00905 Penicillin binding protein transpeptidase domain D1103_08615 PF02590 Predicted SPOUT methyltransferase D1103_08625 PF00488 MutS domain V D1103_08625 PF05190 MutS family domain IV D1103_08625 PF05192 MutS domain III D1103_08625 PF05188 MutS domain II D1103_08625 PF01624 MutS domain I D1103_08630 PF00005 ABC transporter D1103_08635 PF00528 Binding-protein-dependent transport system inner membrane component D1103_08640 PF03313 Serine dehydratase alpha chain D1103_08645 PF04405 Domain of Unknown function (DUF542) D1103_08645 PF01814 Hemerythrin HHE cation binding domain D1103_08650 PF00893 Small Multidrug Resistance protein D1103_08655 PF04175 Protein of unknown function (DUF406) D1103_08670 PF01774 UreD urease accessory protein D1103_08675 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1103_08680 PF01730 UreF D1103_08685 PF02814 UreE urease accessory protein, N-terminal domain D1103_08685 PF05194 UreE urease accessory protein, C-terminal domain D1103_08695 PF00449 Urease alpha-subunit, N-terminal domain D1103_08695 PF01979 Amidohydrolase family D1103_08700 PF00699 Urease beta subunit D1103_08705 PF00547 Urease, gamma subunit D1103_08715 PF00005 ABC transporter D1103_08725 PF01891 Cobalt uptake substrate-specific transmembrane region D1103_08735 PF10670 Domain of unknown function (DUF4198) D1103_08740 PF03466 LysR substrate binding domain D1103_08740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_08750 PF02080 TrkA-C domain D1103_08750 PF03600 Citrate transporter D1103_08755 PF05068 Mannitol repressor D1103_08760 PF08125 Mannitol dehydrogenase C-terminal domain D1103_08760 PF01232 Mannitol dehydrogenase Rossmann domain D1103_08765 PF02378 Phosphotransferase system, EIIC D1103_08765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1103_08765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1103_08775 PF01380 SIS domain D1103_08780 PF08220 DeoR-like helix-turn-helix domain D1103_08780 PF00455 DeoR C terminal sensor domain D1103_08795 PF18254 HMW1 domain 2 D1103_08795 PF18071 HMW1C N-terminal D1103_08800 PF04055 Radical SAM superfamily D1103_08800 PF18693 TRAM domain D1103_08800 PF00919 Uncharacterized protein family UPF0004 D1103_08805 PF01048 Phosphorylase superfamily D1103_08815 PF04102 SlyX D1103_08820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1103_08820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1103_08825 PF13309 HTH domain D1103_08825 PF08348 YheO-like PAS domain D1103_08830 PF02635 DsrE/DsrF-like family D1103_08835 PF02635 DsrE/DsrF-like family D1103_08840 PF04077 DsrH like protein D1103_08870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1103_08875 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1103_08875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1103_08880 PF00231 ATP synthase D1103_08885 PF00306 ATP synthase alpha/beta chain, C terminal domain D1103_08885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1103_08885 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1103_08890 PF00213 ATP synthase delta (OSCP) subunit D1103_08895 PF00430 ATP synthase B/B' CF(0) D1103_08900 PF00137 ATP synthase subunit C D1103_08905 PF00119 ATP synthase A chain D1103_08915 PF02527 rRNA small subunit methyltransferase G D1103_08920 PF01134 Glucose inhibited division protein A D1103_08920 PF13932 GidA associated domain D1103_08930 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1103_08935 PF02810 SEC-C motif D1103_08945 PF03613 PTS system mannose/fructose/sorbose family IID component D1103_08950 PF03609 PTS system sorbose-specific iic component D1103_08955 PF03610 PTS system fructose IIA component D1103_08955 PF03830 PTS system sorbose subfamily IIB component D1103_08960 PF02447 GntP family permease D1103_08965 PF01202 Shikimate kinase D1103_08970 PF00356 Bacterial regulatory proteins, lacI family D1103_08970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1103_08975 PF00356 Bacterial regulatory proteins, lacI family D1103_08980 PF05025 RbsD / FucU transport protein family D1103_08985 PF00005 ABC transporter D1103_08990 PF02653 Branched-chain amino acid transport system / permease component D1103_08995 PF13407 Periplasmic binding protein domain D1103_09000 PF00294 pfkB family carbohydrate kinase D1103_09005 PF01568 Molydopterin dinucleotide binding domain D1103_09005 PF00384 Molybdopterin oxidoreductase D1103_09005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1103_09010 PF12800 4Fe-4S binding domain D1103_09010 PF13247 4Fe-4S dicluster domain D1103_09015 PF04976 DMSO reductase anchor subunit (DmsC) D1103_09020 PF02613 Nitrate reductase delta subunit D1103_09025 PF00037 4Fe-4S binding domain D1103_09025 PF12838 4Fe-4S dicluster domain D1103_09055 PF02769 AIR synthase related protein, C-terminal domain D1103_09055 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1103_09055 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1103_09065 PF07690 Major Facilitator Superfamily D1103_09070 PF00294 pfkB family carbohydrate kinase D1103_09075 PF01791 DeoC/LacD family aldolase D1103_09080 PF08220 DeoR-like helix-turn-helix domain D1103_09080 PF00455 DeoR C terminal sensor domain D1103_09085 PF00455 DeoR C terminal sensor domain D1103_09085 PF08220 DeoR-like helix-turn-helix domain D1103_09090 PF07881 L-fucose isomerase, first N-terminal domain D1103_09090 PF02952 L-fucose isomerase, C-terminal domain D1103_09090 PF07882 L-fucose isomerase, second N-terminal domain D1103_09095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1103_09095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1103_09100 PF05025 RbsD / FucU transport protein family D1103_09105 PF00596 Class II Aldolase and Adducin N-terminal domain D1103_09110 PF07690 Major Facilitator Superfamily D1103_09115 PF00465 Iron-containing alcohol dehydrogenase D1103_09120 PF07274 Protein of unknown function (DUF1440) D1103_09125 PF00528 Binding-protein-dependent transport system inner membrane component D1103_09135 PF00005 ABC transporter D1103_09140 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1103_09145 PF05159 Capsule polysaccharide biosynthesis protein D1103_09150 PF05159 Capsule polysaccharide biosynthesis protein D1103_09160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1103_09165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1103_09170 PF03611 PTS system sugar-specific permease component D1103_09180 PF08220 DeoR-like helix-turn-helix domain D1103_09180 PF00455 DeoR C terminal sensor domain D1103_09185 PF01261 Xylose isomerase-like TIM barrel D1103_09190 PF00596 Class II Aldolase and Adducin N-terminal domain D1103_09195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1103_09195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1103_09210 PF01370 NAD dependent epimerase/dehydratase family D1103_09215 PF01327 Polypeptide deformylase D1103_09220 PF02481 DNA recombination-mediator protein A D1103_09220 PF17782 DprA winged helix domain D1103_09225 PF03169 OPT oligopeptide transporter protein D1103_09230 PF03611 PTS system sugar-specific permease component D1103_09240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1103_09245 PF02357 Transcription termination factor nusG D1103_09245 PF00467 KOW motif D1103_09250 PF03946 Ribosomal protein L11, N-terminal domain D1103_09250 PF00298 Ribosomal protein L11, RNA binding domain D1103_09255 PF00687 Ribosomal protein L1p/L10e family D1103_09260 PF00466 Ribosomal protein L10 D1103_09265 PF00542 Ribosomal protein L7/L12 C-terminal domain D1103_09265 PF16320 Ribosomal protein L7/L12 dimerisation domain D1103_09300 PF04560 RNA polymerase Rpb2, domain 7 D1103_09300 PF04563 RNA polymerase beta subunit D1103_09300 PF04561 RNA polymerase Rpb2, domain 2 D1103_09300 PF04565 RNA polymerase Rpb2, domain 3 D1103_09300 PF10385 RNA polymerase beta subunit external 1 domain D1103_09300 PF00562 RNA polymerase Rpb2, domain 6 D1103_09305 PF05000 RNA polymerase Rpb1, domain 4 D1103_09305 PF04998 RNA polymerase Rpb1, domain 5 D1103_09305 PF00623 RNA polymerase Rpb1, domain 2 D1103_09305 PF04983 RNA polymerase Rpb1, domain 3 D1103_09305 PF04997 RNA polymerase Rpb1, domain 1 D1103_09315 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D1103_09320 PF01850 PIN domain D1103_09340 PF07724 AAA domain (Cdc48 subfamily) D1103_09340 PF10431 C-terminal, D2-small domain, of ClpB protein D1103_09340 PF00004 ATPase family associated with various cellular activities (AAA) D1103_09345 PF00227 Proteasome subunit D1103_09350 PF17746 SfsA N-terminal OB domain D1103_09350 PF03749 Sugar fermentation stimulation protein RE domain D1103_09355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1103_09360 PF00730 HhH-GPD superfamily base excision DNA repair protein D1103_09360 PF14815 NUDIX domain D1103_09365 PF04362 Bacterial Fe(2+) trafficking D1103_09370 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1103_09370 PF01464 Transglycosylase SLT domain D1103_09400 PF03796 DnaB-like helicase C terminal domain D1103_09400 PF00772 DnaB-like helicase N terminal domain D1103_09410 PF00589 Phage integrase family D1103_09410 PF02899 Phage integrase, N-terminal SAM-like domain D1103_09435 PF00005 ABC transporter D1103_09435 PF00664 ABC transporter transmembrane region D1103_09435 PF03412 Peptidase C39 family D1103_09440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1103_09440 PF00529 HlyD membrane-fusion protein of T1SS D1103_09455 PF00448 SRP54-type protein, GTPase domain D1103_09455 PF02881 SRP54-type protein, helical bundle domain D1103_09455 PF02978 Signal peptide binding domain D1103_09460 PF00149 Calcineurin-like phosphoesterase D1103_09460 PF02872 5'-nucleotidase, C-terminal domain D1103_09465 PF01494 FAD binding domain D1103_09470 PF01381 Helix-turn-helix D1103_09475 PF01078 Magnesium chelatase, subunit ChlI D1103_09475 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1103_09485 PF00561 alpha/beta hydrolase fold D1103_09490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1103_09490 PF16582 Middle domain of thiamine pyrophosphate D1103_09490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1103_09495 PF13472 GDSL-like Lipase/Acylhydrolase family D1103_09495 PF02348 Cytidylyltransferase D1103_09500 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D1103_09505 PF00480 ROK family D1103_09510 PF00701 Dihydrodipicolinate synthetase family D1103_09515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1103_09520 PF01979 Amidohydrolase family D1103_09525 PF10415 Fumarase C C-terminus D1103_09525 PF00206 Lyase D1103_09535 PF00338 Ribosomal protein S10p/S20e D1103_09540 PF00297 Ribosomal protein L3 D1103_09545 PF00573 Ribosomal protein L4/L1 family D1103_09550 PF00276 Ribosomal protein L23 D1103_09555 PF00181 Ribosomal Proteins L2, RNA binding domain D1103_09555 PF03947 Ribosomal Proteins L2, C-terminal domain D1103_09560 PF00203 Ribosomal protein S19 D1103_09565 PF00237 Ribosomal protein L22p/L17e D1103_09570 PF00189 Ribosomal protein S3, C-terminal domain D1103_09570 PF07650 KH domain D1103_09575 PF00252 Ribosomal protein L16p/L10e D1103_09580 PF00831 Ribosomal L29 protein D1103_09585 PF00366 Ribosomal protein S17 D1103_09595 PF00238 Ribosomal protein L14p/L23e D1103_09600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1103_09600 PF00467 KOW motif D1103_09605 PF00673 ribosomal L5P family C-terminus D1103_09605 PF00281 Ribosomal protein L5 D1103_09610 PF00253 Ribosomal protein S14p/S29e D1103_09615 PF00410 Ribosomal protein S8 D1103_09620 PF00347 Ribosomal protein L6 D1103_09625 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1103_09630 PF00333 Ribosomal protein S5, N-terminal domain D1103_09630 PF03719 Ribosomal protein S5, C-terminal domain D1103_09635 PF00327 Ribosomal protein L30p/L7e D1103_09640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1103_09645 PF00344 SecY translocase D1103_09650 PF00444 Ribosomal protein L36 D1103_09655 PF00416 Ribosomal protein S13/S18 D1103_09660 PF00411 Ribosomal protein S11 D1103_09665 PF01479 S4 domain D1103_09665 PF00163 Ribosomal protein S4/S9 N-terminal domain D1103_09670 PF01000 RNA polymerase Rpb3/RpoA insert domain D1103_09670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1103_09670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1103_09675 PF01196 Ribosomal protein L17 D1103_09680 PF00886 Ribosomal protein S16 D1103_09685 PF05239 PRC-barrel domain D1103_09685 PF01782 RimM N-terminal domain D1103_09690 PF01746 tRNA (Guanine-1)-methyltransferase D1103_09695 PF01245 Ribosomal protein L19 D1103_09700 PF08007 Cupin superfamily protein D1103_09705 PF01497 Periplasmic binding protein D1103_09710 PF01032 FecCD transport family D1103_09715 PF00005 ABC transporter D1103_09720 PF00127 Copper binding proteins, plastocyanin/azurin family D1103_09735 PF02613 Nitrate reductase delta subunit D1103_09740 PF00384 Molybdopterin oxidoreductase D1103_09740 PF01568 Molydopterin dinucleotide binding domain D1103_09740 PF18364 Molybdopterin oxidoreductase N-terminal domain D1103_09750 PF02091 Glycyl-tRNA synthetase alpha subunit D1103_09755 PF04480 Protein of unknown function (DUF559) D1103_09765 PF05746 DALR anticodon binding domain D1103_09765 PF02092 Glycyl-tRNA synthetase beta subunit D1103_09770 PF17347 Family of unknown function (DUF5377) D1103_09775 PF00589 Phage integrase family D1103_09775 PF02899 Phage integrase, N-terminal SAM-like domain D1103_09780 PF04304 Protein of unknown function (DUF454) D1103_09790 PF00149 Calcineurin-like phosphoesterase D1103_09795 PF07509 Protein of unknown function (DUF1523) D1103_09800 PF01026 TatD related DNase D1103_09815 PF00005 ABC transporter D1103_09815 PF02687 FtsX-like permease family D1103_09815 PF12704 MacB-like periplasmic core domain D1103_09820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1103_09825 PF06629 MltA-interacting protein MipA D1103_09830 PF09115 DNA polymerase III, delta subunit, C terminal D1103_09835 PF02223 Thymidylate kinase D1103_09840 PF02618 YceG-like family D1103_09860 PF00550 Phosphopantetheine attachment site D1103_09865 PF00834 Ribulose-phosphate 3 epimerase family D1103_09870 PF01197 Ribosomal protein L31 D1103_09875 PF00444 Ribosomal protein L36 D1103_09880 PF00912 Transglycosylase D1103_09880 PF00905 Penicillin binding protein transpeptidase domain D1103_09880 PF14814 Bifunctional transglycosylase second domain D1103_09885 PF00378 Enoyl-CoA hydratase/isomerase D1103_09890 PF04607 Region found in RelA / SpoT proteins D1103_09890 PF13291 ACT domain D1103_09890 PF02824 TGS domain D1103_09895 PF01192 RNA polymerase Rpb6 D1103_09900 PF00271 Helicase conserved C-terminal domain D1103_09900 PF17191 RecG wedge domain D1103_09900 PF00270 DEAD/DEAH box helicase D1103_09915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1103_09915 PF04073 Aminoacyl-tRNA editing domain D1103_09915 PF03129 Anticodon binding domain D1103_09925 PF04542 Sigma-70 region 2 D1103_09925 PF08281 Sigma-70, region 4 D1103_09930 PF00174 Oxidoreductase molybdopterin binding domain D1103_09935 PF01794 Ferric reductase like transmembrane component D1103_09940 PF00140 Sigma-70 factor, region 1.2 D1103_09940 PF04542 Sigma-70 region 2 D1103_09940 PF04545 Sigma-70, region 4 D1103_09945 PF07690 Major Facilitator Superfamily D1103_09965 PF03590 Aspartate-ammonia ligase D1103_09970 PF01037 Lrp/AsnC ligand binding domain D1103_09970 PF13404 AsnC-type helix-turn-helix domain D1103_09975 PF01048 Phosphorylase superfamily D1103_09980 PF04345 Chorismate lyase D1103_09985 PF01177 Asp/Glu/Hydantoin racemase D1103_10020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1103_10020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1103_10025 PF00175 Oxidoreductase NAD-binding domain D1103_10025 PF00258 Flavodoxin D1103_10025 PF00667 FAD binding domain D1103_10030 PF08803 Putative mono-oxygenase ydhR D1103_10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_10035 PF03466 LysR substrate binding domain D1103_10040 PF00009 Elongation factor Tu GTP binding domain D1103_10045 PF01507 Phosphoadenosine phosphosulfate reductase family D1103_10050 PF01507 Phosphoadenosine phosphosulfate reductase family D1103_10055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1103_10055 PF10414 Sirohaem synthase dimerisation region D1103_10055 PF14824 Sirohaem biosynthesis protein central D1103_10065 PF00528 Binding-protein-dependent transport system inner membrane component D1103_10070 PF00528 Binding-protein-dependent transport system inner membrane component D1103_10075 PF00005 ABC transporter D1103_10075 PF12857 TOBE-like domain D1103_10075 PF17850 CysA C-terminal regulatory domain D1103_10080 PF01070 FMN-dependent dehydrogenase D1103_10085 PF08279 HTH domain D1103_10085 PF03099 Biotin/lipoate A/B protein ligase family D1103_10085 PF02237 Biotin protein ligase C terminal domain D1103_10090 PF01565 FAD binding domain D1103_10090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1103_10095 PF00691 OmpA family D1103_10095 PF01389 OmpA-like transmembrane domain D1103_10100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1103_10100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1103_10105 PF04403 Paraquat-inducible protein A D1103_10110 PF01841 Transglutaminase-like superfamily D1103_10120 PF00403 Heavy-metal-associated domain D1103_10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1103_10130 PF03466 LysR substrate binding domain D1103_10135 PF14602 Hexapeptide repeat of succinyl-transferase D1103_10135 PF00132 Bacterial transferase hexapeptide (six repeats) D1103_10135 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1103_10140 PF01220 Dehydroquinase class II D1103_10145 PF04488 Glycosyltransferase sugar-binding region containing DXD motif D1103_10150 PF00364 Biotin-requiring enzyme D1103_10155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1103_10155 PF02785 Biotin carboxylase C-terminal domain D1103_10155 PF00289 Biotin carboxylase, N-terminal domain D1103_10160 PF12804 MobA-like NTP transferase domain D1103_10165 PF06288 Protein of unknown function (DUF1040) D1103_10170 PF01323 DSBA-like thioredoxin domain D1103_10180 PF05036 Sporulation related domain D1103_10180 PF05036 Sporulation related domain D1103_10185 PF04445 Putative SAM-dependent methyltransferase D1103_10190 PF02557 D-alanyl-D-alanine carboxypeptidase D1103_10195 PF07687 Peptidase dimerisation domain D1103_10195 PF01546 Peptidase family M20/M25/M40 D1103_10200 PF03960 ArsC family D1103_10210 PF00809 Pterin binding enzyme D1103_10215 PF00849 RNA pseudouridylate synthase D1103_10215 PF01479 S4 domain D1103_10225 PF00924 Mechanosensitive ion channel D1103_10225 PF05552 Conserved TM helix D1103_10230 PF00289 Biotin carboxylase, N-terminal domain D1103_10230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1103_10230 PF02785 Biotin carboxylase C-terminal domain D1103_10240 PF00675 Insulinase (Peptidase family M16) D1103_10240 PF05193 Peptidase M16 inactive domain D1103_10240 PF16187 Middle or third domain of peptidase_M16 D1103_10245 PF17946 RecC C-terminal domain D1103_10270 PF07977 FabA-like domain D1103_10275 PF13654 AAA domain D1103_10275 PF05362 Lon protease (S16) C-terminal proteolytic domain D1103_10280 PF06303 MatP N-terminal domain D1103_10280 PF17414 MatP C-terminal ribbon-helix-helix domain D1103_10285 PF00579 tRNA synthetases class I (W and Y) D1103_10290 PF13419 Haloacid dehalogenase-like hydrolase D1103_10300 PF01790 Prolipoprotein diacylglyceryl transferase D1103_10305 PF01925 Sulfite exporter TauE/SafE D1103_10310 PF00293 NUDIX domain D1103_10320 PF00719 Inorganic pyrophosphatase D1103_10325 PF05175 Methyltransferase small domain D1103_10330 PF03737 Aldolase/RraA D1103_10335 PF01226 Formate/nitrite transporter D1103_10355 PF00226 DnaJ domain D1103_10355 PF01556 DnaJ C terminal domain D1103_10355 PF00684 DnaJ central domain D1103_10360 PF00012 Hsp70 protein D1103_10365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1103_10365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1103_10375 PF13407 Periplasmic binding protein domain D1103_10380 PF00005 ABC transporter D1103_10385 PF02653 Branched-chain amino acid transport system / permease component D1103_10390 PF12833 Helix-turn-helix domain D1103_10395 PF05649 Peptidase family M13 D1103_10395 PF01431 Peptidase family M13 D1103_10400 PF10571 Uncharacterised protein family UPF0547 D1103_10405 PF00474 Sodium:solute symporter family D1103_10410 PF06196 Protein of unknown function (DUF997) D1103_10415 PF01340 Met Apo-repressor, MetJ D1103_10420 PF04333 MlaA lipoprotein D1103_10425 PF01263 Aldose 1-epimerase D1103_10440 PF14883 Hypothetical glycosyl hydrolase family 13 D1103_10440 PF01522 Polysaccharide deacetylase D1103_10445 PF00535 Glycosyl transferase family 2 D1103_10455 PF00121 Triosephosphate isomerase D1103_10460 PF01142 tRNA pseudouridine synthase D (TruD) D1103_10465 PF01975 Survival protein SurE D1103_10470 PF09335 SNARE associated Golgi protein D1103_10485 PF01551 Peptidase family M23 D1103_10485 PF01476 LysM domain D1103_10490 PF03352 Methyladenine glycosylase D1103_10500 PF07670 Nucleoside recognition D1103_10505 PF07670 Nucleoside recognition D1103_10510 PF00762 Ferrochelatase D1103_10515 PF00468 Ribosomal protein L34 D1103_10520 PF00825 Ribonuclease P D1103_10525 PF01809 Putative membrane protein insertion efficiency factor D1103_10530 PF00120 Glutamine synthetase, catalytic domain D1103_10530 PF03951 Glutamine synthetase, beta-Grasp domain D1103_10535 PF00149 Calcineurin-like phosphoesterase D1103_10540 PF00293 NUDIX domain D1103_10545 PF06146 Phosphate-starvation-inducible E D1103_10550 PF01648 4'-phosphopantetheinyl transferase superfamily D1103_10555 PF00892 EamA-like transporter family D1103_10560 PF06965 Na+/H+ antiporter 1 D1103_10570 PF02580 D-Tyr-tRNA(Tyr) deacylase D1103_10575 PF03631 Virulence factor BrkB D1103_10580 PF00171 Aldehyde dehydrogenase family D1103_10600 PF01119 DNA mismatch repair protein, C-terminal domain D1103_10600 PF08676 MutL C terminal dimerisation domain D1103_10605 PF08240 Alcohol dehydrogenase GroES-like domain D1103_10605 PF00107 Zinc-binding dehydrogenase D1103_10615 PF17209 Hfq protein D1103_10620 PF16360 GTP-binding GTPase Middle Region D1103_10620 PF13167 GTP-binding GTPase N-terminal D1103_10620 PF01926 50S ribosome-binding GTPase D1103_10625 PF03641 Possible lysine decarboxylase D1103_10630 PF03819 MazG nucleotide pyrophosphohydrolase domain D1103_10635 PF13545 Crp-like helix-turn-helix domain D1103_10635 PF00027 Cyclic nucleotide-binding domain D1103_10640 PF06794 Uncharacterised protein family (UPF0270) D1103_10645 PF00440 Bacterial regulatory proteins, tetR family D1103_10650 PF00692 dUTPase D1103_10655 PF04127 DNA / pantothenate metabolism flavoprotein D1103_10655 PF02441 Flavoprotein D1103_10660 PF04002 RadC-like JAB domain D1103_10665 PF00830 Ribosomal L28 family D1103_10670 PF00471 Ribosomal protein L33 D1103_10685 PF00202 Aminotransferase class-III D1103_10690 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1103_10695 PF01206 Sulfurtransferase TusA D1103_10700 PF04143 Sulphur transport D1103_10705 PF04219 Protein of unknown function, DUF D1103_10710 PF05958 tRNA (Uracil-5-)-methyltransferase D1103_10725 PF01544 CorA-like Mg2+ transporter protein D1103_10730 PF01209 ubiE/COQ5 methyltransferase family D1103_10740 PF03109 ABC1 family D1103_10745 PF02416 mttA/Hcf106 family D1103_10755 PF00902 Sec-independent protein translocase protein (TatC) D1103_10760 PF00490 Delta-aminolevulinic acid dehydratase D1103_10770 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1103_10770 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1103_10770 PF06827 Zinc finger found in FPG and IleRS D1103_10775 PF05525 Branched-chain amino acid transport protein D1103_10785 PF00698 Acyl transferase domain D1103_10790 PF02677 Epoxyqueuosine reductase QueH D1103_10795 PF00348 Polyprenyl synthetase D1103_10805 PF03358 NADPH-dependent FMN reductase D1103_10810 PF07681 DoxX D1103_10815 PF00829 Ribosomal prokaryotic L21 protein D1103_10820 PF01016 Ribosomal L27 protein D1103_10825 PF00892 EamA-like transporter family D1103_10830 PF04575 Protein of unknown function (DUF560) D1103_10835 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1103_10840 PF00156 Phosphoribosyl transferase domain D1103_10845 PF05175 Methyltransferase small domain D1103_10845 PF08468 Methyltransferase small domain N-terminal D1103_10855 PF00583 Acetyltransferase (GNAT) family D1103_10860 PF00271 Helicase conserved C-terminal domain D1103_10860 PF00270 DEAD/DEAH box helicase D1103_10865 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1103_10865 PF01243 Pyridoxamine 5'-phosphate oxidase D1103_10870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1103_10875 PF00171 Aldehyde dehydrogenase family D1103_10880 PF01184 GPR1/FUN34/yaaH family D1103_10885 PF00005 ABC transporter D1103_10895 PF01032 FecCD transport family D1103_10910 PF01259 SAICAR synthetase D1103_10915 PF01634 ATP phosphoribosyltransferase D1103_10915 PF08029 HisG, C-terminal domain D1103_10920 PF00815 Histidinol dehydrogenase D1103_10925 PF00155 Aminotransferase class I and II D1103_10930 PF01797 Transposase IS200 like D1103_10935 PF00475 Imidazoleglycerol-phosphate dehydratase D1103_10945 PF00117 Glutamine amidotransferase class-I D1103_10950 PF00977 Histidine biosynthesis protein D1103_10955 PF00977 Histidine biosynthesis protein D1103_10960 PF01502 Phosphoribosyl-AMP cyclohydrolase D1103_10960 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1103_10965 PF02592 Putative vitamin uptake transporter D1103_10970 PF00557 Metallopeptidase family M24 D1103_10980 PF13407 Periplasmic binding protein domain D1103_10980 PF00356 Bacterial regulatory proteins, lacI family D1103_10985 PF08244 Glycosyl hydrolases family 32 C terminal D1103_10985 PF00251 Glycosyl hydrolases family 32 N-terminal domain D1103_10990 PF00294 pfkB family carbohydrate kinase D1103_10995 PF07732 Multicopper oxidase D1103_11000 PF02687 FtsX-like permease family D1103_11000 PF12704 MacB-like periplasmic core domain D1103_11005 PF00005 ABC transporter D1103_11010 PF02687 FtsX-like permease family D1103_11010 PF12704 MacB-like periplasmic core domain D1103_11015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1103_11015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1103_11020 PF00793 DAHP synthetase I family D1103_11025 PF13369 Transglutaminase-like superfamily D1103_11030 PF13847 Methyltransferase domain D1103_11030 PF17827 PrmC N-terminal domain D1103_11040 PF03462 PCRF domain D1103_11040 PF00472 RF-1 domain D1103_11045 PF00581 Rhodanese-like domain D1103_11050 PF04143 Sulphur transport