locus-tag class description D1095_00005 PF00308 Bacterial dnaA protein D1095_00005 PF08299 Bacterial dnaA protein helix-turn-helix D1095_00005 PF11638 DnaA N-terminal domain D1095_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1095_00010 PF02767 DNA polymerase III beta subunit, central domain D1095_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1095_00015 PF02463 RecF/RecN/SMC N terminal domain D1095_00020 PF00080 Copper/zinc superoxide dismutase (SODC) D1095_00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1095_00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1095_00035 PF02684 Lipid-A-disaccharide synthetase D1095_00040 PF01343 Peptidase family S49 D1095_00040 PF08496 Peptidase family S49 N-terminal D1095_00045 PF02381 MraZ protein, putative antitoxin-like D1095_00050 PF01795 MraW methylase family D1095_00055 PF04999 Cell division protein FtsL D1095_00060 PF00905 Penicillin binding protein transpeptidase domain D1095_00060 PF03717 Penicillin-binding Protein dimerisation domain D1095_00065 PF01225 Mur ligase family, catalytic domain D1095_00065 PF02875 Mur ligase family, glutamate ligase domain D1095_00065 PF08245 Mur ligase middle domain D1095_00070 PF01225 Mur ligase family, catalytic domain D1095_00070 PF02875 Mur ligase family, glutamate ligase domain D1095_00070 PF08245 Mur ligase middle domain D1095_00075 PF00953 Glycosyl transferase family 4 D1095_00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1095_00080 PF02875 Mur ligase family, glutamate ligase domain D1095_00080 PF08245 Mur ligase middle domain D1095_00085 PF01098 Cell cycle protein D1095_00090 PF04101 Glycosyltransferase family 28 C-terminal domain D1095_00090 PF03033 Glycosyltransferase family 28 N-terminal domain D1095_00095 PF01225 Mur ligase family, catalytic domain D1095_00095 PF02875 Mur ligase family, glutamate ligase domain D1095_00095 PF08245 Mur ligase middle domain D1095_00100 PF01820 D-ala D-ala ligase N-terminus D1095_00100 PF07478 D-ala D-ala ligase C-terminus D1095_00105 PF03799 Cell division protein FtsQ D1095_00105 PF08478 POTRA domain, FtsQ-type D1095_00110 PF02491 SHS2 domain inserted in FTSA D1095_00115 PF12327 FtsZ family, C-terminal domain D1095_00115 PF00091 Tubulin/FtsZ family, GTPase domain D1095_00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1095_00125 PF02463 RecF/RecN/SMC N terminal domain D1095_00135 PF00005 ABC transporter D1095_00135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1095_00140 PF00528 Binding-protein-dependent transport system inner membrane component D1095_00140 PF12911 N-terminal TM domain of oligopeptide transport permease C D1095_00145 PF00528 Binding-protein-dependent transport system inner membrane component D1095_00150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1095_00155 PF16658 Class II release factor RF3, C-terminal domain D1095_00155 PF03144 Elongation factor Tu domain 2 D1095_00155 PF00009 Elongation factor Tu GTP binding domain D1095_00170 PF01195 Peptidyl-tRNA hydrolase D1095_00175 PF01926 50S ribosome-binding GTPase D1095_00175 PF06071 Protein of unknown function (DUF933) D1095_00190 PF05433 Glycine zipper 2TM domain D1095_00195 PF06185 YecM protein D1095_00200 PF03485 Arginyl tRNA synthetase N terminal domain D1095_00200 PF05746 DALR anticodon binding domain D1095_00200 PF00750 tRNA synthetases class I (R) D1095_00205 PF01018 GTP1/OBG D1095_00205 PF01926 50S ribosome-binding GTPase D1095_00210 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) D1095_00215 PF00588 SpoU rRNA Methylase family D1095_00215 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1095_00220 PF13091 PLD-like domain D1095_00225 PF08264 Anticodon-binding domain of tRNA D1095_00225 PF00133 tRNA synthetases class I (I, L, M and V) D1095_00225 PF06827 Zinc finger found in FPG and IleRS D1095_00230 PF01687 Riboflavin kinase D1095_00230 PF06574 FAD synthetase D1095_00235 PF13521 AAA domain D1095_00235 PF01467 Cytidylyltransferase-like D1095_00240 PF00149 Calcineurin-like phosphoesterase D1095_00245 PF00072 Response regulator receiver domain D1095_00245 PF00486 Transcriptional regulatory protein, C terminal D1095_00260 PF01168 Alanine racemase, N-terminal domain D1095_00270 PF03144 Elongation factor Tu domain 2 D1095_00270 PF00679 Elongation factor G C-terminus D1095_00270 PF00009 Elongation factor Tu GTP binding domain D1095_00275 PF00462 Glutaredoxin D1095_00280 PF01138 3' exoribonuclease family, domain 1 D1095_00280 PF03725 3' exoribonuclease family, domain 2 D1095_00285 PF08340 Domain of unknown function (DUF1732) D1095_00285 PF03755 YicC-like family, N-terminal region D1095_00290 PF01571 Aminomethyltransferase folate-binding domain D1095_00295 PF00037 4Fe-4S binding domain D1095_00300 PF00196 Bacterial regulatory proteins, luxR family D1095_00300 PF00072 Response regulator receiver domain D1095_00305 PF01170 Putative RNA methylase family UPF0020 D1095_00305 PF02926 THUMP domain D1095_00305 PF10672 S-adenosylmethionine-dependent methyltransferase D1095_00310 PF00588 SpoU rRNA Methylase family D1095_00315 PF00923 Transaldolase/Fructose-6-phosphate aldolase D1095_00345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1095_00350 PF00528 Binding-protein-dependent transport system inner membrane component D1095_00355 PF00528 Binding-protein-dependent transport system inner membrane component D1095_00355 PF12911 N-terminal TM domain of oligopeptide transport permease C D1095_00360 PF00005 ABC transporter D1095_00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1095_00365 PF00005 ABC transporter D1095_00365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1095_00370 PF06146 Phosphate-starvation-inducible E D1095_00380 PF01042 Endoribonuclease L-PSP D1095_00385 PF01063 Amino-transferase class IV D1095_00390 PF00462 Glutaredoxin D1095_00395 PF02132 RecR protein D1095_00395 PF13662 Toprim domain D1095_00400 PF02575 YbaB/EbfC DNA-binding family D1095_00405 PF03544 Gram-negative bacterial TonB protein C-terminal D1095_00410 PF02472 Biopolymer transport protein ExbD/TolR D1095_00415 PF01618 MotA/TolQ/ExbB proton channel family D1095_00420 PF00581 Rhodanese-like domain D1095_00430 PF03610 PTS system fructose IIA component D1095_00430 PF05524 PEP-utilising enzyme, N-terminal D1095_00430 PF00391 PEP-utilising enzyme, mobile domain D1095_00430 PF00381 PTS HPr component phosphorylation site D1095_00435 PF02734 DAK2 domain D1095_00440 PF02733 Dak1 domain D1095_00445 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1095_00450 PF02348 Cytidylyltransferase D1095_00455 PF06078 Bacterial protein of unknown function (DUF937) D1095_00460 PF00293 NUDIX domain D1095_00460 PF09297 NADH pyrophosphatase zinc ribbon domain D1095_00465 PF00849 RNA pseudouridylate synthase D1095_00475 PF04186 FxsA cytoplasmic membrane protein D1095_00480 PF00557 Metallopeptidase family M24 D1095_00485 PF01206 Sulfurtransferase TusA D1095_00490 PF06877 Regulator of ribonuclease activity B D1095_00495 PF01926 50S ribosome-binding GTPase D1095_00505 PF02535 ZIP Zinc transporter D1095_00510 PF00920 Dehydratase family D1095_00520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1095_00520 PF00205 Thiamine pyrophosphate enzyme, central domain D1095_00520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1095_00525 PF02335 Cytochrome c552 D1095_00535 PF13247 4Fe-4S dicluster domain D1095_00540 PF03916 Polysulphide reductase, NrfD D1095_00570 PF03895 YadA-like membrane anchor domain D1095_00570 PF13018 Extended Signal Peptide of Type V secretion system D1095_00570 PF05662 Coiled stalk of trimeric autotransporter adhesin D1095_00570 PF05658 Head domain of trimeric autotransporter adhesin D1095_00570 PF03895 YadA-like membrane anchor domain D1095_00570 PF05658 Head domain of trimeric autotransporter adhesin D1095_00570 PF05662 Coiled stalk of trimeric autotransporter adhesin D1095_00570 PF05658 Head domain of trimeric autotransporter adhesin D1095_00570 PF03895 YadA-like membrane anchor domain D1095_00570 PF13018 Extended Signal Peptide of Type V secretion system D1095_00570 PF13018 Extended Signal Peptide of Type V secretion system D1095_00570 PF05662 Coiled stalk of trimeric autotransporter adhesin D1095_00575 PF00860 Permease family D1095_00580 PF00171 Aldehyde dehydrogenase family D1095_00580 PF01619 Proline dehydrogenase D1095_00580 PF14850 DNA-binding domain of Proline dehydrogenase D1095_00580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D1095_00585 PF00474 Sodium:solute symporter family D1095_00590 PF09339 IclR helix-turn-helix domain D1095_00590 PF01614 Bacterial transcriptional regulator D1095_00595 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1095_00605 PF05164 Cell division protein ZapA D1095_00610 PF03695 Uncharacterised protein family (UPF0149) D1095_00615 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1095_00620 PF04222 Protein of unknown function (DUF416) D1095_00625 PF00216 Bacterial DNA-binding protein D1095_00630 PF00303 Thymidylate synthase D1095_00640 PF06968 Biotin and Thiamin Synthesis associated domain D1095_00640 PF04055 Radical SAM superfamily D1095_00645 PF00313 'Cold-shock' DNA-binding domain D1095_00650 PF04352 ProQ/FINO family D1095_00655 PF17804 Tail specific protease N-terminal domain D1095_00655 PF03572 Peptidase family S41 D1095_00655 PF11818 C-terminal domain of tail specific protease (DUF3340) D1095_00655 PF00595 PDZ domain D1095_00660 PF03734 L,D-transpeptidase catalytic domain D1095_00665 PF05951 Bacterial protein of unknown function (DUF882) D1095_00670 PF00753 Metallo-beta-lactamase superfamily D1095_00685 PF01230 HIT domain D1095_00690 PF00950 ABC 3 transport family D1095_00695 PF00950 ABC 3 transport family D1095_00700 PF01351 Ribonuclease HII D1095_00705 PF03193 RsgA GTPase D1095_00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_00710 PF03466 LysR substrate binding domain D1095_00715 PF13419 Haloacid dehalogenase-like hydrolase D1095_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_00720 PF03466 LysR substrate binding domain D1095_00730 PF17763 Glutaminase/Asparaginase C-terminal domain D1095_00730 PF00710 Asparaginase, N-terminal D1095_00735 PF00117 Glutamine amidotransferase class-I D1095_00735 PF06418 CTP synthase N-terminus D1095_00740 PF10063 Uncharacterized integral membrane protein (DUF2301) D1095_00745 PF00694 Aconitase C-terminal domain D1095_00750 PF00330 Aconitase family (aconitate hydratase) D1095_00755 PF05651 Putative sugar diacid recognition D1095_00755 PF17853 GGDEF-like domain D1095_00755 PF13556 PucR C-terminal helix-turn-helix domain D1095_00760 PF02447 GntP family permease D1095_00765 PF02595 Glycerate kinase family D1095_00770 PF00708 Acylphosphatase D1095_00775 PF11398 Protein of unknown function (DUF2813) D1095_00780 PF11892 Domain of unknown function (DUF3412) D1095_00780 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1095_00780 PF03641 Possible lysine decarboxylase D1095_00785 PF01207 Dihydrouridine synthase (Dus) D1095_00795 PF03477 ATP cone domain D1095_00795 PF02867 Ribonucleotide reductase, barrel domain D1095_00795 PF00317 Ribonucleotide reductase, all-alpha domain D1095_00800 PF01106 NifU-like domain D1095_00800 PF01521 Iron-sulphur cluster biosynthesis D1095_00805 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D1095_00805 PF11973 NQRA C-terminal domain D1095_00810 PF03116 NQR2, RnfD, RnfE family D1095_00815 PF04205 FMN-binding domain D1095_00820 PF02508 Rnf-Nqr subunit, membrane protein D1095_00825 PF02508 Rnf-Nqr subunit, membrane protein D1095_00830 PF00111 2Fe-2S iron-sulfur cluster binding domain D1095_00830 PF00175 Oxidoreductase NAD-binding domain D1095_00830 PF00970 Oxidoreductase FAD-binding domain D1095_00835 PF02424 ApbE family D1095_00840 PF04400 (Na+)-NQR maturation NqrM D1095_00850 PF12832 MFS_1 like family D1095_00855 PF03807 NADP oxidoreductase coenzyme F420-dependent D1095_00855 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1095_00860 PF04381 Putative exonuclease, RdgC D1095_00865 PF13419 Haloacid dehalogenase-like hydrolase D1095_00880 PF02508 Rnf-Nqr subunit, membrane protein D1095_00885 PF04060 Putative Fe-S cluster D1095_00890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1095_00890 PF12838 4Fe-4S dicluster domain D1095_00890 PF13375 RnfC Barrel sandwich hybrid domain D1095_00895 PF03458 UPF0126 domain D1095_00900 PF03116 NQR2, RnfD, RnfE family D1095_00905 PF04205 FMN-binding domain D1095_00910 PF02508 Rnf-Nqr subunit, membrane protein D1095_00915 PF03279 Bacterial lipid A biosynthesis acyltransferase D1095_00930 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1095_00935 PF01743 Poly A polymerase head domain D1095_00935 PF12626 Polymerase A arginine-rich C-terminus D1095_00935 PF12627 Probable RNA and SrmB- binding site of polymerase A D1095_00940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1095_00950 PF11739 Dicarboxylate transport D1095_00960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1095_00965 PF00929 Exonuclease D1095_00975 PF02153 Prephenate dehydrogenase D1095_00975 PF01817 Chorismate mutase type II D1095_00980 PF00793 DAHP synthetase I family D1095_00985 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1095_00990 PF00224 Pyruvate kinase, barrel domain D1095_00990 PF02887 Pyruvate kinase, alpha/beta domain D1095_00995 PF00300 Histidine phosphatase superfamily (branch 1) D1095_01000 PF01207 Dihydrouridine synthase (Dus) D1095_01005 PF02954 Bacterial regulatory protein, Fis family D1095_01010 PF00209 Sodium:neurotransmitter symporter family D1095_01015 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1095_01020 PF01761 3-dehydroquinate synthase D1095_01025 PF01202 Shikimate kinase D1095_01030 PF17092 Penicillin-binding protein OB-like domain D1095_01030 PF00912 Transglycosylase D1095_01030 PF00905 Penicillin binding protein transpeptidase domain D1095_01035 PF11104 Type IV pilus assembly protein PilM; D1095_01055 PF03958 Bacterial type II/III secretion system short domain D1095_01055 PF00263 Bacterial type II and III secretion system protein D1095_01060 PF01029 NusB family D1095_01065 PF02769 AIR synthase related protein, C-terminal domain D1095_01065 PF00586 AIR synthase related protein, N-terminal domain D1095_01070 PF04608 Phosphatidylglycerophosphatase A D1095_01075 PF01810 LysE type translocator D1095_01080 PF00588 SpoU rRNA Methylase family D1095_01080 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1095_01085 PF00459 Inositol monophosphatase family D1095_01090 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1095_01090 PF02779 Transketolase, pyrimidine binding domain D1095_01090 PF02780 Transketolase, C-terminal domain D1095_01100 PF00464 Serine hydroxymethyltransferase D1095_01105 PF01513 ATP-NAD kinase D1095_01110 PF18019 HD domain D1095_01115 PF01867 CRISPR associated protein Cas1 D1095_01125 PF09615 CRISPR-associated protein (Cas_Csy3) D1095_01130 PF09614 CRISPR-associated protein (Cas_Csy2) D1095_01140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1095_01140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1095_01140 PF03129 Anticodon binding domain D1095_01140 PF02824 TGS domain D1095_01145 PF03783 Curli production assembly/transport component CsgG D1095_01155 PF05643 Putative bacterial lipoprotein (DUF799) D1095_01160 PF00707 Translation initiation factor IF-3, C-terminal domain D1095_01160 PF05198 Translation initiation factor IF-3, N-terminal domain D1095_01165 PF01632 Ribosomal protein L35 D1095_01170 PF00453 Ribosomal protein L20 D1095_01185 PF00571 CBS domain D1095_01185 PF03471 Transporter associated domain D1095_01185 PF01595 Cyclin M transmembrane N-terminal domain D1095_01190 PF00849 RNA pseudouridylate synthase D1095_01195 PF00300 Histidine phosphatase superfamily (branch 1) D1095_01200 PF03652 Holliday junction resolvase D1095_01205 PF02622 Uncharacterized ACR, COG1678 D1095_01210 PF04452 RNA methyltransferase D1095_01220 PF01722 BolA-like protein D1095_01245 PF07517 SecA DEAD-like domain D1095_01245 PF01043 SecA preprotein cross-linking domain D1095_01245 PF02810 SEC-C motif D1095_01245 PF07516 SecA Wing and Scaffold domain D1095_01255 PF00293 NUDIX domain D1095_01260 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1095_01265 PF00696 Amino acid kinase family D1095_01270 PF00202 Aminotransferase class-III D1095_01275 PF17484 N-Lobe handle Tf-binding protein B D1095_01275 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1095_01275 PF17483 C-lobe handle domain of Tf-binding protein B D1095_01280 PF07715 TonB-dependent Receptor Plug Domain D1095_01280 PF00593 TonB dependent receptor D1095_01285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1095_01285 PF07498 Rho termination factor, N-terminal domain D1095_01285 PF07497 Rho termination factor, RNA-binding domain D1095_01290 PF00291 Pyridoxal-phosphate dependent enzyme D1095_01295 PF00288 GHMP kinases N terminal domain D1095_01295 PF08544 GHMP kinases C terminal D1095_01300 PF03447 Homoserine dehydrogenase, NAD binding domain D1095_01300 PF00742 Homoserine dehydrogenase D1095_01300 PF13840 ACT domain D1095_01300 PF00696 Amino acid kinase family D1095_01300 PF01842 ACT domain D1095_01305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1095_01305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1095_01310 PF00842 Alanine racemase, C-terminal domain D1095_01310 PF01168 Alanine racemase, N-terminal domain D1095_01315 PF13538 UvrD-like helicase C-terminal domain D1095_01350 PF07687 Peptidase dimerisation domain D1095_01350 PF01546 Peptidase family M20/M25/M40 D1095_01355 PF00156 Phosphoribosyl transferase domain D1095_01360 PF00625 Guanylate kinase D1095_01365 PF02321 Outer membrane efflux protein D1095_01370 PF03658 RnfH family Ubiquitin D1095_01375 PF03364 Polyketide cyclase / dehydrase and lipid transport D1095_01380 PF00005 ABC transporter D1095_01380 PF03459 TOBE domain D1095_01385 PF00528 Binding-protein-dependent transport system inner membrane component D1095_01395 PF01061 ABC-2 type transporter D1095_01400 PF00005 ABC transporter D1095_01405 PF12169 DNA polymerase III subunits gamma and tau domain III D1095_01405 PF12170 DNA polymerase III tau subunit V interacting with alpha D1095_01410 PF00156 Phosphoribosyl transferase domain D1095_01420 PF01042 Endoribonuclease L-PSP D1095_01425 PF00291 Pyridoxal-phosphate dependent enzyme D1095_01430 PF04073 Aminoacyl-tRNA editing domain D1095_01435 PF00005 ABC transporter D1095_01440 PF01297 Zinc-uptake complex component A periplasmic D1095_01445 PF04358 DsrC like protein D1095_01450 PF01027 Inhibitor of apoptosis-promoting Bax1 D1095_01455 PF01066 CDP-alcohol phosphatidyltransferase D1095_01465 PF02151 UvrB/uvrC motif D1095_01465 PF08459 UvrC Helix-hairpin-helix N-terminal D1095_01465 PF01541 GIY-YIG catalytic domain D1095_01470 PF01026 TatD related DNase D1095_01475 PF00580 UvrD/REP helicase N-terminal domain D1095_01475 PF13361 UvrD-like helicase C-terminal domain D1095_01480 PF00005 ABC transporter D1095_01480 PF08402 TOBE domain D1095_01485 PF00528 Binding-protein-dependent transport system inner membrane component D1095_01490 PF00528 Binding-protein-dependent transport system inner membrane component D1095_01495 PF07499 RuvA, C-terminal domain D1095_01495 PF01330 RuvA N terminal domain D1095_01500 PF17864 RuvB AAA lid domain D1095_01500 PF05491 RuvB C-terminal winged helix domain D1095_01500 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1095_01510 PF00521 DNA gyrase/topoisomerase IV, subunit A D1095_01510 PF03989 DNA gyrase C-terminal domain, beta-propeller D1095_01515 PF02384 N-6 DNA Methylase D1095_01515 PF12161 HsdM N-terminal domain D1095_01530 PF01420 Type I restriction modification DNA specificity domain D1095_01555 PF12008 Type I restriction and modification enzyme - subunit R C terminal D1095_01555 PF18766 SWI2/SNF2 ATPase D1095_01555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1095_01560 PF00005 ABC transporter D1095_01560 PF12848 ABC transporter D1095_01560 PF16326 ABC transporter C-terminal domain D1095_01565 PF00899 ThiF family D1095_01570 PF17274 Family of unknown function (DUF5339) D1095_01575 PF01654 Cytochrome bd terminal oxidase subunit I D1095_01580 PF02322 Cytochrome bd terminal oxidase subunit II D1095_01595 PF03061 Thioesterase superfamily D1095_01600 PF01618 MotA/TolQ/ExbB proton channel family D1095_01605 PF02472 Biopolymer transport protein ExbD/TolR D1095_01610 PF06519 TolA C-terminal D1095_01610 PF06519 TolA C-terminal D1095_01615 PF07676 WD40-like Beta Propeller Repeat D1095_01615 PF04052 TolB amino-terminal domain D1095_01620 PF00691 OmpA family D1095_01630 PF05099 Tellurite resistance protein TerB D1095_01630 PF00226 DnaJ domain D1095_01635 PF01207 Dihydrouridine synthase (Dus) D1095_01640 PF05128 Domain of unknown function (DUF697) D1095_01645 PF00005 ABC transporter D1095_01645 PF12848 ABC transporter D1095_01655 PF00994 Probable molybdopterin binding domain D1095_01655 PF03454 MoeA C-terminal region (domain IV) D1095_01655 PF03453 MoeA N-terminal region (domain I and II) D1095_01660 PF00899 ThiF family D1095_01670 PF01938 TRAM domain D1095_01670 PF05958 tRNA (Uracil-5-)-methyltransferase D1095_01675 PF01966 HD domain D1095_01675 PF13286 Phosphohydrolase-associated domain D1095_01680 PF12137 RNA polymerase recycling family C-terminal D1095_01680 PF18337 RapA N-terminal Tudor like domain D1095_01680 PF00271 Helicase conserved C-terminal domain D1095_01680 PF18339 RapA N-terminal Tudor like domain 1 D1095_01680 PF00176 SNF2 family N-terminal domain D1095_01685 PF00849 RNA pseudouridylate synthase D1095_01690 PF01510 N-acetylmuramoyl-L-alanine amidase D1095_01695 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1095_01700 PF00156 Phosphoribosyl transferase domain D1095_01705 PF01717 Cobalamin-independent synthase, Catalytic domain D1095_01710 PF01053 Cys/Met metabolism PLP-dependent enzyme D1095_01715 PF02600 Disulfide bond formation protein DsbB D1095_01720 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D1095_01725 PF07840 FadR C-terminal domain D1095_01725 PF00392 Bacterial regulatory proteins, gntR family D1095_01730 PF02562 PhoH-like protein D1095_01750 PF00293 NUDIX domain D1095_01755 PF01494 FAD binding domain D1095_01775 PF01494 FAD binding domain D1095_01780 PF03668 P-loop ATPase protein family D1095_01785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1095_01790 PF00005 ABC transporter D1095_01790 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1095_01795 PF03968 OstA-like protein D1095_01805 PF00311 Phosphoenolpyruvate carboxylase D1095_01810 PF04536 TPM domain D1095_01820 PF04011 LemA family D1095_01825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1095_01830 PF00294 pfkB family carbohydrate kinase D1095_01835 PF00381 PTS HPr component phosphorylation site D1095_01835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1095_01840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1095_01840 PF00128 Alpha amylase, catalytic domain D1095_01840 PF02806 Alpha amylase, C-terminal all-beta domain D1095_01845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1095_01845 PF18390 Glycogen debranching enzyme C-terminal domain D1095_01845 PF00128 Alpha amylase, catalytic domain D1095_01850 PF00483 Nucleotidyl transferase D1095_01855 PF00534 Glycosyl transferases group 1 D1095_01855 PF08323 Starch synthase catalytic domain D1095_01860 PF00343 Carbohydrate phosphorylase D1095_01865 PF00334 Nucleoside diphosphate kinase D1095_01870 PF08264 Anticodon-binding domain of tRNA D1095_01870 PF09334 tRNA synthetases class I (M) D1095_01870 PF01588 Putative tRNA binding domain D1095_01875 PF13378 Enolase C-terminal domain-like D1095_01885 PF00849 RNA pseudouridylate synthase D1095_01885 PF01479 S4 domain D1095_01890 PF07690 Major Facilitator Superfamily D1095_01905 PF01261 Xylose isomerase-like TIM barrel D1095_01910 PF00877 NlpC/P60 family D1095_01915 PF00717 Peptidase S24-like D1095_01920 PF01228 Glycine radical D1095_01925 PF03167 Uracil DNA glycosylase superfamily D1095_01930 PF04393 Protein of unknown function (DUF535) D1095_01935 PF03797 Autotransporter beta-domain D1095_01935 PF00082 Subtilase family D1095_01940 PF04408 Helicase associated domain (HA2) D1095_01940 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1095_01940 PF00271 Helicase conserved C-terminal domain D1095_01940 PF00270 DEAD/DEAH box helicase D1095_01940 PF11898 Domain of unknown function (DUF3418) D1095_01945 PF04284 Protein of unknown function (DUF441) D1095_01950 PF01025 GrpE D1095_01955 PF13416 Bacterial extracellular solute-binding protein D1095_01960 PF01554 MatE D1095_01965 PF12705 PD-(D/E)XK nuclease superfamily D1095_01965 PF00580 UvrD/REP helicase N-terminal domain D1095_01965 PF13361 UvrD-like helicase C-terminal domain D1095_01970 PF00795 Carbon-nitrogen hydrolase D1095_01975 PF00571 CBS domain D1095_01975 PF03471 Transporter associated domain D1095_01980 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1095_01985 PF00230 Major intrinsic protein D1095_01990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1095_01990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1095_01995 PF00004 ATPase family associated with various cellular activities (AAA) D1095_01995 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1095_01995 PF05362 Lon protease (S16) C-terminal proteolytic domain D1095_02000 PF07690 Major Facilitator Superfamily D1095_02005 PF03009 Glycerophosphoryl diester phosphodiesterase family D1095_02010 PF01266 FAD dependent oxidoreductase D1095_02010 PF04324 BFD-like [2Fe-2S] binding domain D1095_02015 PF00890 FAD binding domain D1095_02020 PF02754 Cysteine-rich domain D1095_02020 PF13183 4Fe-4S dicluster domain D1095_02025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1095_02025 PF01872 RibD C-terminal domain D1095_02030 PF00677 Lumazine binding domain D1095_02035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1095_02035 PF00925 GTP cyclohydrolase II D1095_02040 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1095_02045 PF01272 Transcription elongation factor, GreA/GreB, C-term D1095_02045 PF03449 Transcription elongation factor, N-terminal D1095_02050 PF00571 CBS domain D1095_02050 PF01380 SIS domain D1095_02055 PF12404 Peptidase D1095_02055 PF00883 Cytosol aminopeptidase family, catalytic domain D1095_02060 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D1095_02065 PF01758 Sodium Bile acid symporter family D1095_02070 PF13533 Biotin-lipoyl like D1095_02080 PF00682 HMGL-like D1095_02080 PF08502 LeuA allosteric (dimerisation) domain D1095_02090 PF03873 Anti sigma-E protein RseA, C-terminal domain D1095_02090 PF03872 Anti sigma-E protein RseA, N-terminal domain D1095_02100 PF00501 AMP-binding enzyme D1095_02100 PF13193 AMP-binding enzyme C-terminal domain D1095_02110 PF00398 Ribosomal RNA adenine dimethylase D1095_02115 PF00639 PPIC-type PPIASE domain D1095_02115 PF09312 SurA N-terminal domain D1095_02120 PF00156 Phosphoribosyl transferase domain D1095_02125 PF01467 Cytidylyltransferase-like D1095_02125 PF00294 pfkB family carbohydrate kinase D1095_02130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1095_02130 PF01926 50S ribosome-binding GTPase D1095_02135 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1095_02135 PF01488 Shikimate / quinate 5-dehydrogenase D1095_02135 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1095_02140 PF04607 Region found in RelA / SpoT proteins D1095_02140 PF13291 ACT domain D1095_02140 PF02824 TGS domain D1095_02145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1095_02145 PF13288 DXP reductoisomerase C-terminal domain D1095_02145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1095_02150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1095_02150 PF00132 Bacterial transferase hexapeptide (six repeats) D1095_02155 PF07977 FabA-like domain D1095_02160 PF00132 Bacterial transferase hexapeptide (six repeats) D1095_02160 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1095_02170 PF01103 Surface antigen D1095_02170 PF07244 Surface antigen variable number repeat D1095_02175 PF02163 Peptidase family M50 D1095_02185 PF01255 Putative undecaprenyl diphosphate synthase D1095_02190 PF00753 Metallo-beta-lactamase superfamily D1095_02190 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1095_02195 PF00480 ROK family D1095_02200 PF01569 PAP2 superfamily D1095_02205 PF01985 CRS1 / YhbY (CRM) domain D1095_02210 PF00535 Glycosyl transferase family 2 D1095_02215 PF00768 D-alanyl-D-alanine carboxypeptidase D1095_02220 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1095_02225 PF00764 Arginosuccinate synthase D1095_02230 PF00075 RNase H D1095_02235 PF02674 Colicin V production protein D1095_02240 PF00156 Phosphoribosyl transferase domain D1095_02250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D1095_02250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D1095_02255 PF04355 SmpA / OmlA family D1095_02260 PF04245 37-kD nucleoid-associated bacterial protein D1095_02265 PF01042 Endoribonuclease L-PSP D1095_02270 PF02578 Multi-copper polyphenol oxidoreductase laccase D1095_02280 PF07119 Protein of unknown function (DUF1375) D1095_02285 PF00180 Isocitrate/isopropylmalate dehydrogenase D1095_02290 PF01641 SelR domain D1095_02295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1095_02295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1095_02305 PF04085 rod shape-determining protein MreC D1095_02310 PF04093 rod shape-determining protein MreD D1095_02315 PF00004 ATPase family associated with various cellular activities (AAA) D1095_02315 PF16193 AAA C-terminal domain D1095_02315 PF12002 MgsA AAA+ ATPase C terminal D1095_02320 PF00950 ABC 3 transport family D1095_02325 PF13230 Glutamine amidotransferases class-II D1095_02330 PF00561 alpha/beta hydrolase fold D1095_02335 PF02698 DUF218 domain D1095_02375 PF02589 LUD domain D1095_02380 PF02589 LUD domain D1095_02380 PF11870 Domain of unknown function (DUF3390) D1095_02380 PF13183 4Fe-4S dicluster domain D1095_02385 PF02754 Cysteine-rich domain D1095_02390 PF02652 L-lactate permease D1095_02395 PF00816 H-NS histone family D1095_02400 PF03553 Na+/H+ antiporter family D1095_02405 PF13407 Periplasmic binding protein domain D1095_02410 PF02629 CoA binding domain D1095_02410 PF00549 CoA-ligase D1095_02415 PF08442 ATP-grasp domain D1095_02415 PF00549 CoA-ligase D1095_02420 PF04393 Protein of unknown function (DUF535) D1095_02425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1095_02425 PF00364 Biotin-requiring enzyme D1095_02425 PF02817 e3 binding domain D1095_02430 PF00676 Dehydrogenase E1 component D1095_02430 PF16870 2-oxoglutarate dehydrogenase C-terminal D1095_02430 PF02779 Transketolase, pyrimidine binding domain D1095_02430 PF16078 2-oxoglutarate dehydrogenase N-terminus D1095_02435 PF00005 ABC transporter D1095_02440 PF01551 Peptidase family M23 D1095_02440 PF04225 Opacity-associated protein A LysM-like domain D1095_02445 PF13098 Thioredoxin-like domain D1095_02445 PF10411 Disulfide bond isomerase protein N-terminus D1095_02450 PF02272 DHHA1 domain D1095_02450 PF01368 DHH family D1095_02450 PF17768 RecJ OB domain D1095_02455 PF00691 OmpA family D1095_02455 PF01389 OmpA-like transmembrane domain D1095_02465 PF07730 Histidine kinase D1095_02465 PF00672 HAMP domain D1095_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_02465 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1095_02475 PF01725 Ham1 family D1095_02480 PF01906 Putative heavy-metal-binding D1095_02485 PF01268 Formate--tetrahydrofolate ligase D1095_02490 PF03692 Putative zinc- or iron-chelating domain D1095_02495 PF00106 short chain dehydrogenase D1095_02500 PF00291 Pyridoxal-phosphate dependent enzyme D1095_02505 PF00290 Tryptophan synthase alpha chain D1095_02525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1095_02525 PF01367 5'-3' exonuclease, C-terminal SAM fold D1095_02525 PF00476 DNA polymerase family A D1095_02525 PF01612 3'-5' exonuclease D1095_02530 PF03548 Outer membrane lipoprotein carrier protein LolA D1095_02535 PF01371 Trp repressor protein D1095_02540 PF00912 Transglycosylase D1095_02545 PF02627 Carboxymuconolactone decarboxylase family D1095_02575 PF00881 Nitroreductase family D1095_02580 PF08443 RimK-like ATP-grasp domain D1095_02580 PF18030 RimK PreATP-grasp domain D1095_02585 PF02698 DUF218 domain D1095_02590 PF00390 Malic enzyme, N-terminal domain D1095_02590 PF03949 Malic enzyme, NAD binding domain D1095_02590 PF01515 Phosphate acetyl/butaryl transferase D1095_02595 PF01386 Ribosomal L25p family D1095_02605 PF06226 Protein of unknown function (DUF1007) D1095_02610 PF03824 High-affinity nickel-transport protein D1095_02615 PF01235 Sodium:alanine symporter family D1095_02620 PF00005 ABC transporter D1095_02625 PF00005 ABC transporter D1095_02630 PF00528 Binding-protein-dependent transport system inner membrane component D1095_02640 PF02597 ThiS family D1095_02650 PF04055 Radical SAM superfamily D1095_02650 PF06968 Biotin and Thiamin Synthesis associated domain D1095_02655 PF03070 TENA/THI-4/PQQC family D1095_02660 PF09084 NMT1/THI5 like D1095_02675 PF03144 Elongation factor Tu domain 2 D1095_02675 PF00679 Elongation factor G C-terminus D1095_02675 PF00009 Elongation factor Tu GTP binding domain D1095_02675 PF06421 GTP-binding protein LepA C-terminus D1095_02680 PF10502 Signal peptidase, peptidase S26 D1095_02685 PF00035 Double-stranded RNA binding motif D1095_02685 PF14622 Ribonuclease-III-like D1095_02690 PF07650 KH domain D1095_02690 PF01926 50S ribosome-binding GTPase D1095_02695 PF02565 Recombination protein O C terminal D1095_02695 PF11967 Recombination protein O N terminal D1095_02730 PF00437 Type II/IV secretion system protein D1095_02745 PF00263 Bacterial type II and III secretion system protein D1095_02745 PF04972 BON domain D1095_02745 PF13629 Pilus formation protein N terminal region D1095_02760 PF05872 Bacterial protein of unknown function (DUF853) D1095_02780 PF00528 Binding-protein-dependent transport system inner membrane component D1095_02790 PF00005 ABC transporter D1095_02790 PF06472 ABC transporter transmembrane region 2 D1095_02795 PF00318 Ribosomal protein S2 D1095_02800 PF00889 Elongation factor TS D1095_02805 PF00884 Sulfatase D1095_02810 PF00696 Amino acid kinase family D1095_02815 PF01765 Ribosome recycling factor D1095_02820 PF00155 Aminotransferase class I and II D1095_02820 PF00392 Bacterial regulatory proteins, gntR family D1095_02825 PF01680 SOR/SNZ family D1095_02830 PF01174 SNO glutamine amidotransferase family D1095_02835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1095_02840 PF03880 DbpA RNA binding domain D1095_02840 PF00271 Helicase conserved C-terminal domain D1095_02840 PF00270 DEAD/DEAH box helicase D1095_02850 PF00575 S1 RNA binding domain D1095_02850 PF03725 3' exoribonuclease family, domain 2 D1095_02850 PF01138 3' exoribonuclease family, domain 1 D1095_02850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1095_02850 PF00013 KH domain D1095_02855 PF03989 DNA gyrase C-terminal domain, beta-propeller D1095_02855 PF00521 DNA gyrase/topoisomerase IV, subunit A D1095_02865 PF17192 MukF middle domain D1095_02865 PF03882 MukF winged-helix domain D1095_02865 PF17193 MukF C-terminal domain D1095_02870 PF04288 MukE-like family D1095_02875 PF04310 MukB N-terminal D1095_02875 PF16330 MukB hinge domain D1095_02880 PF07690 Major Facilitator Superfamily D1095_02885 PF11893 Domain of unknown function (DUF3413) D1095_02885 PF00884 Sulfatase D1095_02890 PF07208 Protein of unknown function (DUF1414) D1095_02895 PF00440 Bacterial regulatory proteins, tetR family D1095_02900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1095_02905 PF00873 AcrB/AcrD/AcrF family D1095_02910 PF00132 Bacterial transferase hexapeptide (six repeats) D1095_02910 PF12804 MobA-like NTP transferase domain D1095_02920 PF08942 Domain of unknown function (DUF1919) D1095_02925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1095_02925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1095_02925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1095_02925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1095_02930 PF00117 Glutamine amidotransferase class-I D1095_02930 PF02540 NAD synthase D1095_02930 PF00958 GMP synthase C terminal domain D1095_02940 PF00478 IMP dehydrogenase / GMP reductase domain D1095_02940 PF00571 CBS domain D1095_02945 PF01728 FtsJ-like methyltransferase D1095_02950 PF17862 AAA+ lid domain D1095_02950 PF01434 Peptidase family M41 D1095_02950 PF00004 ATPase family associated with various cellular activities (AAA) D1095_02950 PF06480 FtsH Extracellular D1095_02955 PF03222 Tryptophan/tyrosine permease family D1095_02960 PF03222 Tryptophan/tyrosine permease family D1095_02965 PF01966 HD domain D1095_02965 PF08335 GlnD PII-uridylyltransferase D1095_02975 PF00572 Ribosomal protein L13 D1095_02980 PF00380 Ribosomal protein S9/S16 D1095_02985 PF03883 Peroxide stress protein YaaA D1095_02995 PF16916 Dimerisation domain of Zinc Transporter D1095_02995 PF01545 Cation efflux family D1095_03000 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D1095_03005 PF00375 Sodium:dicarboxylate symporter family D1095_03010 PF00881 Nitroreductase family D1095_03015 PF01409 tRNA synthetases class II core domain (F) D1095_03015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1095_03020 PF03147 Ferredoxin-fold anticodon binding domain D1095_03020 PF03484 tRNA synthetase B5 domain D1095_03020 PF03483 B3/4 domain D1095_03020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1095_03020 PF01588 Putative tRNA binding domain D1095_03025 PF00216 Bacterial DNA-binding protein D1095_03030 PF00877 NlpC/P60 family D1095_03045 PF01047 MarR family D1095_03045 PF00480 ROK family D1095_03050 PF00570 HRDC domain D1095_03050 PF01612 3'-5' exonuclease D1095_03055 PF01037 Lrp/AsnC ligand binding domain D1095_03060 PF17854 FtsK alpha domain D1095_03060 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1095_03060 PF01580 FtsK/SpoIIIE family D1095_03060 PF09397 Ftsk gamma domain D1095_03065 PF04228 Putative neutral zinc metallopeptidase D1095_03070 PF00793 DAHP synthetase I family D1095_03075 PF00814 Glycoprotease family D1095_03080 PF00265 Thymidine kinase D1095_03085 PF06005 Cell division protein ZapB D1095_03090 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1095_03095 PF01784 NIF3 (NGG1p interacting factor 3) D1095_03100 PF02687 FtsX-like permease family D1095_03100 PF12704 MacB-like periplasmic core domain D1095_03100 PF00005 ABC transporter D1095_03105 PF00672 HAMP domain D1095_03105 PF00512 His Kinase A (phospho-acceptor) domain D1095_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_03105 PF16527 Two-component sensor protein CpxA, periplasmic domain D1095_03110 PF00486 Transcriptional regulatory protein, C terminal D1095_03110 PF00072 Response regulator receiver domain D1095_03115 PF03819 MazG nucleotide pyrophosphohydrolase domain D1095_03120 PF17848 Acetyl-coA carboxylase zinc finger domain D1095_03120 PF01039 Carboxyl transferase domain D1095_03125 PF08245 Mur ligase middle domain D1095_03135 PF17384 RimP C-terminal SH3 domain D1095_03135 PF02576 RimP N-terminal domain D1095_03140 PF13184 NusA-like KH domain D1095_03140 PF00575 S1 RNA binding domain D1095_03140 PF08529 NusA N-terminal domain D1095_03145 PF00009 Elongation factor Tu GTP binding domain D1095_03145 PF11987 Translation-initiation factor 2 D1095_03145 PF04760 Translation initiation factor IF-2, N-terminal region D1095_03150 PF02033 Ribosome-binding factor A D1095_03155 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1095_03155 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1095_03155 PF09157 Pseudouridine synthase II TruB, C-terminal D1095_03160 PF13406 Transglycosylase SLT domain D1095_03165 PF07411 Domain of unknown function (DUF1508) D1095_03170 PF07085 DRTGG domain D1095_03170 PF01515 Phosphate acetyl/butaryl transferase D1095_03175 PF00871 Acetokinase family D1095_03180 PF00149 Calcineurin-like phosphoesterase D1095_03180 PF02872 5'-nucleotidase, C-terminal domain D1095_03190 PF13609 Gram-negative porin D1095_03200 PF00483 Nucleotidyl transferase D1095_03205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1095_03205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1095_03205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1095_03205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1095_03210 PF02599 Global regulator protein family D1095_03215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1095_03215 PF01411 tRNA synthetases class II (A) D1095_03215 PF02272 DHHA1 domain D1095_03220 PF00582 Universal stress protein family D1095_03225 PF00325 Bacterial regulatory proteins, crp family D1095_03225 PF00027 Cyclic nucleotide-binding domain D1095_03230 PF04386 Stringent starvation protein B D1095_03235 PF00043 Glutathione S-transferase, C-terminal domain D1095_03235 PF02798 Glutathione S-transferase, N-terminal domain D1095_03240 PF00731 AIR carboxylase D1095_03245 PF17763 Glutaminase/Asparaginase C-terminal domain D1095_03245 PF00710 Asparaginase, N-terminal D1095_03250 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1095_03250 PF02222 ATP-grasp domain D1095_03255 PF00155 Aminotransferase class I and II D1095_03260 PF05195 Aminopeptidase P, N-terminal domain D1095_03260 PF00557 Metallopeptidase family M24 D1095_03270 PF00271 Helicase conserved C-terminal domain D1095_03270 PF04851 Type III restriction enzyme, res subunit D1095_03270 PF02151 UvrB/uvrC motif D1095_03270 PF17757 UvrB interaction domain D1095_03270 PF12344 Ultra-violet resistance protein B D1095_03280 PF09375 Imelysin D1095_03285 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1095_03285 PF04261 Dyp-type peroxidase family D1095_03295 PF02811 PHP domain D1095_03305 PF00929 Exonuclease D1095_03305 PF08411 Exonuclease C-terminal D1095_03310 PF00654 Voltage gated chloride channel D1095_03315 PF00152 tRNA synthetases class II (D, K and N) D1095_03315 PF01336 OB-fold nucleic acid binding domain D1095_03320 PF04055 Radical SAM superfamily D1095_03330 PF09285 Elongation factor P, C-terminal D1095_03330 PF01132 Elongation factor P (EF-P) OB domain D1095_03330 PF08207 Elongation factor P (EF-P) KOW-like domain D1095_03335 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1095_03335 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1095_03340 PF07690 Major Facilitator Superfamily D1095_03345 PF01464 Transglycosylase SLT domain D1095_03345 PF14718 Soluble lytic murein transglycosylase L domain D1095_03350 PF00156 Phosphoribosyl transferase domain D1095_03355 PF01053 Cys/Met metabolism PLP-dependent enzyme D1095_03360 PF01113 Dihydrodipicolinate reductase, N-terminus D1095_03360 PF05173 Dihydrodipicolinate reductase, C-terminus D1095_03365 PF18125 RlmM ferredoxin-like domain D1095_03365 PF01728 FtsJ-like methyltransferase D1095_03370 PF04241 Protein of unknown function (DUF423) D1095_03375 PF09330 D-lactate dehydrogenase, membrane binding D1095_03375 PF01565 FAD binding domain D1095_03380 PF01568 Molydopterin dinucleotide binding domain D1095_03380 PF18364 Molybdopterin oxidoreductase N-terminal domain D1095_03380 PF00384 Molybdopterin oxidoreductase D1095_03385 PF03264 NapC/NirT cytochrome c family, N-terminal region D1095_03390 PF04055 Radical SAM superfamily D1095_03390 PF06463 Molybdenum Cofactor Synthesis C D1095_03395 PF01967 MoaC family D1095_03400 PF02597 ThiS family D1095_03405 PF02391 MoaE protein D1095_03410 PF02130 Uncharacterized protein family UPF0054 D1095_03415 PF17176 tRNA-binding domain D1095_03415 PF05127 Helicase D1095_03415 PF13718 GNAT acetyltransferase 2 D1095_03420 PF01396 Topoisomerase DNA binding C4 zinc finger D1095_03420 PF01751 Toprim domain D1095_03420 PF01131 DNA topoisomerase D1095_03420 PF08272 Topoisomerase I zinc-ribbon-like D1095_03425 PF03466 LysR substrate binding domain D1095_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_03430 PF00583 Acetyltransferase (GNAT) family D1095_03430 PF00696 Amino acid kinase family D1095_03435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1095_03440 PF00155 Aminotransferase class I and II D1095_03445 PF01053 Cys/Met metabolism PLP-dependent enzyme D1095_03450 PF00266 Aminotransferase class-V D1095_03455 PF00176 SNF2 family N-terminal domain D1095_03455 PF00271 Helicase conserved C-terminal domain D1095_03465 PF18273 Type III R-M EcoP15I C-terminal domain D1095_03465 PF01555 DNA methylase D1095_03475 PF01380 SIS domain D1095_03475 PF01418 Helix-turn-helix domain, rpiR family D1095_03480 PF04074 YhcH/YjgK/YiaL D1095_03485 PF02541 Ppx/GppA phosphatase family D1095_03490 PF04363 Protein of unknown function (DUF496) D1095_03495 PF01842 ACT domain D1095_03495 PF00696 Amino acid kinase family D1095_03500 PF03477 ATP cone domain D1095_03505 PF05166 YcgL domain D1095_03510 PF00772 DnaB-like helicase N terminal domain D1095_03510 PF03796 DnaB-like helicase C terminal domain D1095_03515 PF01497 Periplasmic binding protein D1095_03520 PF01032 FecCD transport family D1095_03525 PF01032 FecCD transport family D1095_03530 PF00005 ABC transporter D1095_03535 PF01865 Protein of unknown function DUF47 D1095_03540 PF01384 Phosphate transporter family D1095_03545 PF08239 Bacterial SH3 domain D1095_03555 PF01814 Hemerythrin HHE cation binding domain D1095_03560 PF01702 Queuine tRNA-ribosyltransferase D1095_03570 PF00313 'Cold-shock' DNA-binding domain D1095_03575 PF00484 Carbonic anhydrase D1095_03580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1095_03580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1095_03580 PF00205 Thiamine pyrophosphate enzyme, central domain D1095_03585 PF10369 Small subunit of acetolactate synthase D1095_03590 PF01523 Putative modulator of DNA gyrase D1095_03595 PF04751 Protein of unknown function (DUF615) D1095_03600 PF04247 Invasion gene expression up-regulator, SirB D1095_03605 PF02441 Flavoprotein D1095_03610 PF04474 Protein of unknown function (DUF554) D1095_03620 PF01253 Translation initiation factor SUI1 D1095_03625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1095_03630 PF18073 Rubredoxin metal binding domain D1095_03635 PF06305 Lipopolysaccharide assembly protein A domain D1095_03640 PF00216 Bacterial DNA-binding protein D1095_03645 PF00575 S1 RNA binding domain D1095_03650 PF02224 Cytidylate kinase D1095_03655 PF13180 PDZ domain D1095_03665 PF03840 Preprotein translocase SecG subunit D1095_03670 PF01751 Toprim domain D1095_03670 PF01131 DNA topoisomerase D1095_03675 PF00245 Alkaline phosphatase D1095_03680 PF03411 Penicillin-insensitive murein endopeptidase D1095_03685 PF01264 Chorismate synthase D1095_03690 PF12795 Mechanosensitive ion channel porin domain D1095_03690 PF00924 Mechanosensitive ion channel D1095_03690 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1095_03695 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1095_03695 PF12795 Mechanosensitive ion channel porin domain D1095_03695 PF00924 Mechanosensitive ion channel D1095_03700 PF00501 AMP-binding enzyme D1095_03705 PF03925 SeqA protein C-terminal domain D1095_03705 PF17206 SeqA protein N-terminal domain D1095_03710 PF00561 alpha/beta hydrolase fold D1095_03715 PF13649 Methyltransferase domain D1095_03735 PF08206 Ribonuclease B OB domain D1095_03735 PF00773 RNB domain D1095_03735 PF00575 S1 RNA binding domain D1095_03740 PF03788 LrgA family D1095_03745 PF04172 LrgB-like family D1095_03750 PF00149 Calcineurin-like phosphoesterase D1095_03760 PF03889 Alternative ribosome-rescue factor A D1095_03765 PF13649 Methyltransferase domain D1095_03770 PF01594 AI-2E family transporter D1095_03775 PF01933 Uncharacterised protein family UPF0052 D1095_03780 PF02547 Queuosine biosynthesis protein D1095_03785 PF00753 Metallo-beta-lactamase superfamily D1095_03785 PF13567 Domain of unknown function (DUF4131) D1095_03785 PF03772 Competence protein D1095_03790 PF00375 Sodium:dicarboxylate symporter family D1095_03800 PF01219 Prokaryotic diacylglycerol kinase D1095_03805 PF00149 Calcineurin-like phosphoesterase D1095_03805 PF02872 5'-nucleotidase, C-terminal domain D1095_03830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1095_03830 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1095_03835 PF00364 Biotin-requiring enzyme D1095_03835 PF02817 e3 binding domain D1095_03835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1095_03840 PF00456 Transketolase, thiamine diphosphate binding domain D1095_03840 PF17831 Pyruvate dehydrogenase E1 component middle domain D1095_03845 PF01180 Dihydroorotate dehydrogenase D1095_03850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1095_03850 PF14572 Phosphoribosyl synthetase-associated domain D1095_03855 PF00288 GHMP kinases N terminal domain D1095_03855 PF08544 GHMP kinases C terminal D1095_03860 PF03550 Outer membrane lipoprotein LolB D1095_03865 PF00005 ABC transporter D1095_03865 PF00664 ABC transporter transmembrane region D1095_03870 PF04172 LrgB-like family D1095_03880 PF06733 DEAD_2 D1095_03880 PF13307 Helicase C-terminal domain D1095_03890 PF17755 UvrA DNA-binding domain D1095_03890 PF17760 UvrA interaction domain D1095_03895 PF00436 Single-strand binding protein family D1095_03930 PF03466 LysR substrate binding domain D1095_03930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_03935 PF03060 Nitronate monooxygenase D1095_03945 PF04237 YjbR D1095_03950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1095_03950 PF00005 ABC transporter D1095_03955 PF12911 N-terminal TM domain of oligopeptide transport permease C D1095_03955 PF00528 Binding-protein-dependent transport system inner membrane component D1095_03960 PF00528 Binding-protein-dependent transport system inner membrane component D1095_03965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1095_03970 PF00158 Sigma-54 interaction domain D1095_03970 PF18024 Helix-turn-helix domain D1095_03975 PF13580 SIS domain D1095_03980 PF01293 Phosphoenolpyruvate carboxykinase D1095_03985 PF04977 Septum formation initiator D1095_03990 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1095_03995 PF02542 YgbB family D1095_04005 PF00884 Sulfatase D1095_04010 PF03476 MOSC N-terminal beta barrel domain D1095_04010 PF03473 MOSC domain D1095_04010 PF00111 2Fe-2S iron-sulfur cluster binding domain D1095_04015 PF02609 Exonuclease VII small subunit D1095_04020 PF00348 Polyprenyl synthetase D1095_04030 PF01336 OB-fold nucleic acid binding domain D1095_04030 PF00152 tRNA synthetases class II (D, K and N) D1095_04035 PF00575 S1 RNA binding domain D1095_04035 PF10150 Ribonuclease E/G family D1095_04040 PF18381 YcaO cyclodehydratase C-terminal domain D1095_04040 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D1095_04050 PF04851 Type III restriction enzyme, res subunit D1095_04050 PF08774 VRR-NUC domain D1095_04055 PF01555 DNA methylase D1095_04055 PF18273 Type III R-M EcoP15I C-terminal domain D1095_04060 PF08003 Protein of unknown function (DUF1698) D1095_04070 PF03562 MltA specific insert domain D1095_04070 PF06725 3D domain D1095_04080 PF13742 OB-fold nucleic acid binding domain D1095_04080 PF02601 Exonuclease VII, large subunit D1095_04090 PF00576 HIUase/Transthyretin family D1095_04095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1095_04095 PF00356 Bacterial regulatory proteins, lacI family D1095_04100 PF09335 SNARE associated Golgi protein D1095_04105 PF01751 Toprim domain D1095_04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_04105 PF00986 DNA gyrase B subunit, carboxyl terminus D1095_04105 PF00204 DNA gyrase B D1095_04105 PF18053 DNA gyrase B subunit insert domain D1095_04110 PF01040 UbiA prenyltransferase family D1095_04115 PF08220 DeoR-like helix-turn-helix domain D1095_04115 PF00455 DeoR C terminal sensor domain D1095_04120 PF00206 Lyase D1095_04120 PF08328 Adenylosuccinate lyase C-terminal D1095_04125 PF04356 Protein of unknown function (DUF489) D1095_04130 PF00005 ABC transporter D1095_04130 PF00664 ABC transporter transmembrane region D1095_04135 PF00005 ABC transporter D1095_04135 PF00664 ABC transporter transmembrane region D1095_04140 PF04357 TamB, inner membrane protein subunit of TAM complex D1095_04145 PF01103 Surface antigen D1095_04145 PF17243 POTRA domain TamA domain 1 D1095_04150 PF04748 Divergent polysaccharide deacetylase D1095_04155 PF01551 Peptidase family M23 D1095_04160 PF00300 Histidine phosphatase superfamily (branch 1) D1095_04165 PF01810 LysE type translocator D1095_04170 PF00485 Phosphoribulokinase / Uridine kinase family D1095_04175 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) D1095_04180 PF14278 Transcriptional regulator C-terminal region D1095_04180 PF00440 Bacterial regulatory proteins, tetR family D1095_04185 PF13533 Biotin-lipoyl like D1095_04190 PF00005 ABC transporter D1095_04200 PF02321 Outer membrane efflux protein D1095_04205 PF02233 NAD(P) transhydrogenase beta subunit D1095_04210 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D1095_04210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1095_04210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1095_04215 PF00588 SpoU rRNA Methylase family D1095_04220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1095_04220 PF14489 QueF-like protein D1095_04230 PF00578 AhpC/TSA family D1095_04235 PF04055 Radical SAM superfamily D1095_04235 PF06969 HemN C-terminal domain D1095_04240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1095_04245 PF00528 Binding-protein-dependent transport system inner membrane component D1095_04250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1095_04250 PF00005 ABC transporter D1095_04255 PF00005 ABC transporter D1095_04255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1095_04260 PF00890 FAD binding domain D1095_04265 PF01717 Cobalamin-independent synthase, Catalytic domain D1095_04270 PF02219 Methylenetetrahydrofolate reductase D1095_04275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1095_04280 PF03222 Tryptophan/tyrosine permease family D1095_04285 PF03313 Serine dehydratase alpha chain D1095_04285 PF03315 Serine dehydratase beta chain D1095_04290 PF01266 FAD dependent oxidoreductase D1095_04290 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D1095_04295 PF00218 Indole-3-glycerol phosphate synthase D1095_04295 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1095_04300 PF12728 Helix-turn-helix domain D1095_04300 PF02661 Fic/DOC family D1095_04305 PF04287 tRNA pseudouridine synthase C D1095_04310 PF00849 RNA pseudouridylate synthase D1095_04315 PF03701 Uncharacterised protein family (UPF0181) D1095_04325 PF01928 CYTH domain D1095_04330 PF04317 YcjX-like family, DUF463 D1095_04335 PF01668 SmpB protein D1095_04340 PF02403 Seryl-tRNA synthetase N-terminal domain D1095_04340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1095_04345 PF01546 Peptidase family M20/M25/M40 D1095_04345 PF07687 Peptidase dimerisation domain D1095_04350 PF03606 C4-dicarboxylate anaerobic carrier D1095_04355 PF03575 Peptidase family S51 D1095_04360 PF13603 Leucyl-tRNA synthetase, Domain 2 D1095_04360 PF00133 tRNA synthetases class I (I, L, M and V) D1095_04360 PF08264 Anticodon-binding domain of tRNA D1095_04365 PF04390 Lipopolysaccharide-assembly D1095_04370 PF06144 DNA polymerase III, delta subunit D1095_04370 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D1095_04375 PF03884 DNA gyrase inhibitor YacG D1095_04380 PF01121 Dephospho-CoA kinase D1095_04390 PF00482 Type II secretion system (T2SS), protein F D1095_04395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1095_04395 PF00437 Type II/IV secretion system protein D1095_04400 PF07963 Prokaryotic N-terminal methylation motif D1095_04405 PF18073 Rubredoxin metal binding domain D1095_04415 PF00186 Dihydrofolate reductase D1095_04420 PF01472 PUA domain D1095_04420 PF00696 Amino acid kinase family D1095_04425 PF01925 Sulfite exporter TauE/SafE D1095_04430 PF00730 HhH-GPD superfamily base excision DNA repair protein D1095_04430 PF10576 Iron-sulfur binding domain of endonuclease III D1095_04430 PF00633 Helix-hairpin-helix motif D1095_04435 PF00108 Thiolase, N-terminal domain D1095_04435 PF02803 Thiolase, C-terminal domain D1095_04440 PF00378 Enoyl-CoA hydratase/isomerase D1095_04440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1095_04440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1095_04455 PF02634 FdhD/NarQ family D1095_04460 PF01568 Molydopterin dinucleotide binding domain D1095_04460 PF00384 Molybdopterin oxidoreductase D1095_04460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1095_04465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1095_04465 PF01568 Molydopterin dinucleotide binding domain D1095_04465 PF00384 Molybdopterin oxidoreductase D1095_04470 PF13247 4Fe-4S dicluster domain D1095_04470 PF09163 Formate dehydrogenase N, transmembrane D1095_04475 PF01292 Prokaryotic cytochrome b561 D1095_04480 PF04216 Protein involved in formate dehydrogenase formation D1095_04495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1095_04495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1095_04505 PF00701 Dihydrodipicolinate synthetase family D1095_04510 PF03279 Bacterial lipid A biosynthesis acyltransferase D1095_04515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1095_04520 PF01416 tRNA pseudouridine synthase D1095_04525 PF01227 GTP cyclohydrolase I D1095_04540 PF14602 Hexapeptide repeat of succinyl-transferase D1095_04540 PF12464 Maltose acetyltransferase D1095_04555 PF03466 LysR substrate binding domain D1095_04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_04560 PF03180 NLPA lipoprotein D1095_04565 PF03180 NLPA lipoprotein D1095_04570 PF00528 Binding-protein-dependent transport system inner membrane component D1095_04575 PF09383 NIL domain D1095_04575 PF00005 ABC transporter D1095_04585 PF01406 tRNA synthetases class I (C) catalytic domain D1095_04585 PF09190 DALR domain D1095_04590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1095_04595 PF01743 Poly A polymerase head domain D1095_04595 PF01966 HD domain D1095_04595 PF12627 Probable RNA and SrmB- binding site of polymerase A D1095_04605 PF00593 TonB dependent receptor D1095_04605 PF07715 TonB-dependent Receptor Plug Domain D1095_04625 PF04384 Iron-sulphur cluster assembly D1095_04630 PF00111 2Fe-2S iron-sulfur cluster binding domain D1095_04635 PF00012 Hsp70 protein D1095_04640 PF10946 Protein of unknown function DUF2625 D1095_04650 PF07743 HSCB C-terminal oligomerisation domain D1095_04655 PF01521 Iron-sulphur cluster biosynthesis D1095_04660 PF01592 NifU-like N terminal domain D1095_04665 PF00266 Aminotransferase class-V D1095_04670 PF02082 Transcriptional regulator D1095_04675 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1095_04680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1095_04680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1095_04685 PF18415 Histidine kinase receptor ArcB trans-membrane domain D1095_04685 PF00989 PAS fold D1095_04685 PF00072 Response regulator receiver domain D1095_04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_04685 PF00512 His Kinase A (phospho-acceptor) domain D1095_04685 PF01627 Hpt domain D1095_04695 PF01713 Smr domain D1095_04705 PF08241 Methyltransferase domain D1095_04710 PF04301 Protein of unknown function (DUF452) D1095_04715 PF00155 Aminotransferase class I and II D1095_04720 PF00202 Aminotransferase class-III D1095_04725 PF05175 Methyltransferase small domain D1095_04730 PF03449 Transcription elongation factor, N-terminal D1095_04730 PF01272 Transcription elongation factor, GreA/GreB, C-term D1095_04735 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1095_04770 PF06114 IrrE N-terminal-like domain D1095_04775 PF01381 Helix-turn-helix D1095_04795 PF00664 ABC transporter transmembrane region D1095_04795 PF00005 ABC transporter D1095_04795 PF03412 Peptidase C39 family D1095_04800 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1095_04800 PF02382 N-terminal domain in RTX protein D1095_04800 PF08339 RTX C-terminal domain D1095_04805 PF02794 RTX toxin acyltransferase family D1095_04810 PF17176 tRNA-binding domain D1095_04810 PF13718 GNAT acetyltransferase 2 D1095_04810 PF05127 Helicase D1095_04815 PF02142 MGS-like domain D1095_04815 PF01808 AICARFT/IMPCHase bienzyme D1095_04835 PF05860 haemagglutination activity domain D1095_04835 PF13332 Hemagglutinin repeat D1095_04835 PF04829 Pre-toxin domain with VENN motif D1095_04840 PF04829 Pre-toxin domain with VENN motif D1095_04840 PF13018 Extended Signal Peptide of Type V secretion system D1095_04840 PF13332 Hemagglutinin repeat D1095_04840 PF05860 haemagglutination activity domain D1095_04845 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D1095_04845 PF17287 POTRA domain D1095_04845 PF08479 POTRA domain, ShlB-type D1095_04850 PF03968 OstA-like protein D1095_04850 PF04453 LPS transport system D D1095_04855 PF06969 HemN C-terminal domain D1095_04855 PF04055 Radical SAM superfamily D1095_04865 PF04220 Der GTPase activator (YihI) D1095_04870 PF06826 Predicted Permease Membrane Region D1095_04870 PF02080 TrkA-C domain D1095_04875 PF03616 Sodium/glutamate symporter D1095_04880 PF06062 Uncharacterised protein family (UPF0231) D1095_04885 PF03710 Glutamate-ammonia ligase adenylyltransferase D1095_04885 PF08335 GlnD PII-uridylyltransferase D1095_04890 PF03795 YCII-related domain D1095_04895 PF03061 Thioesterase superfamily D1095_04900 PF04279 Intracellular septation protein A D1095_04910 PF04217 Protein of unknown function, DUF412 D1095_04915 PF01171 PP-loop family D1095_04920 PF13726 Na+-H+ antiporter family D1095_04920 PF03553 Na+/H+ antiporter family D1095_04925 PF03372 Endonuclease/Exonuclease/phosphatase family D1095_04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_04930 PF03466 LysR substrate binding domain D1095_04950 PF01197 Ribosomal protein L31 D1095_04955 PF02779 Transketolase, pyrimidine binding domain D1095_04955 PF02780 Transketolase, C-terminal domain D1095_04955 PF00456 Transketolase, thiamine diphosphate binding domain D1095_04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_04960 PF00183 Hsp90 protein D1095_04965 PF00199 Catalase D1095_04965 PF06628 Catalase-related immune-responsive D1095_04975 PF00149 Calcineurin-like phosphoesterase D1095_04980 PF03477 ATP cone domain D1095_04980 PF02867 Ribonucleotide reductase, barrel domain D1095_04980 PF00317 Ribonucleotide reductase, all-alpha domain D1095_04985 PF00268 Ribonucleotide reductase, small chain D1095_04990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D1095_04990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D1095_04995 PF10509 Galactokinase galactose-binding signature D1095_04995 PF08544 GHMP kinases C terminal D1095_04995 PF00288 GHMP kinases N terminal domain D1095_05000 PF01263 Aldose 1-epimerase D1095_05005 PF16353 Domain of unknown function(DUF4981) D1095_05005 PF02929 Beta galactosidase small chain D1095_05005 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1095_05005 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1095_05005 PF00703 Glycosyl hydrolases family 2 D1095_05010 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1095_05010 PF06594 Haemolysin-type calcium binding protein related domain D1095_05020 PF10609 NUBPL iron-transfer P-loop NTPase D1095_05030 PF01914 MarC family integral membrane protein D1095_05035 PF13145 PPIC-type PPIASE domain D1095_05040 PF00999 Sodium/hydrogen exchanger family D1095_05045 PF00312 Ribosomal protein S15 D1095_05050 PF05661 Protein of unknown function (DUF808) D1095_05055 PF07219 HemY protein N-terminus D1095_05060 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D1095_05065 PF02602 Uroporphyrinogen-III synthase HemD D1095_05070 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1095_05070 PF03900 Porphobilinogen deaminase, C-terminal domain D1095_05075 PF00171 Aldehyde dehydrogenase family D1095_05075 PF00465 Iron-containing alcohol dehydrogenase D1095_05085 PF06252 Protein of unknown function (DUF1018) D1095_05105 PF07352 Bacteriophage Mu Gam like protein D1095_05115 PF13401 AAA domain D1095_05115 PF01471 Putative peptidoglycan binding domain D1095_05200 PF03237 Terminase-like family D1095_05295 PF00118 TCP-1/cpn60 chaperonin family D1095_05300 PF00166 Chaperonin 10 Kd subunit D1095_05305 PF01048 Phosphorylase superfamily D1095_05310 PF01791 DeoC/LacD family aldolase D1095_05315 PF01773 Na+ dependent nucleoside transporter N-terminus D1095_05315 PF07662 Na+ dependent nucleoside transporter C-terminus D1095_05315 PF07670 Nucleoside recognition D1095_05325 PF01081 KDPG and KHG aldolase D1095_05330 PF00294 pfkB family carbohydrate kinase D1095_05350 PF07729 FCD domain D1095_05350 PF00392 Bacterial regulatory proteins, gntR family D1095_05360 PF01625 Peptide methionine sulfoxide reductase D1095_05360 PF01641 SelR domain D1095_05365 PF00535 Glycosyl transferase family 2 D1095_05370 PF00535 Glycosyl transferase family 2 D1095_05380 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1095_05390 PF04230 Polysaccharide pyruvyl transferase D1095_05395 PF02698 DUF218 domain D1095_05400 PF00271 Helicase conserved C-terminal domain D1095_05400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1095_05400 PF00270 DEAD/DEAH box helicase D1095_05400 PF18074 Primosomal protein N C-terminal domain D1095_05400 PF17764 3′ DNA-binding domain (3′BD) D1095_05405 PF00800 Prephenate dehydratase D1095_05405 PF01817 Chorismate mutase type II D1095_05410 PF01432 Peptidase family M3 D1095_05415 PF04055 Radical SAM superfamily D1095_05420 PF02901 Pyruvate formate lyase-like D1095_05420 PF01228 Glycine radical D1095_05425 PF01226 Formate/nitrite transporter D1095_05435 PF01435 Peptidase family M48 D1095_05440 PF11799 impB/mucB/samB family C-terminal domain D1095_05440 PF11798 IMS family HHH motif D1095_05440 PF00817 impB/mucB/samB family D1095_05445 PF03956 Lysine exporter LysO D1095_05450 PF00425 chorismate binding enzyme D1095_05455 PF00155 Aminotransferase class I and II D1095_05460 PF00892 EamA-like transporter family D1095_05465 PF00892 EamA-like transporter family D1095_05470 PF01810 LysE type translocator D1095_05475 PF00593 TonB dependent receptor D1095_05475 PF04886 PT repeat D1095_05475 PF07715 TonB-dependent Receptor Plug Domain D1095_05480 PF01243 Pyridoxamine 5'-phosphate oxidase D1095_05490 PF03918 Cytochrome C biogenesis protein D1095_05495 PF08534 Redoxin D1095_05500 PF01578 Cytochrome C assembly protein D1095_05500 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1095_05505 PF00999 Sodium/hydrogen exchanger family D1095_05505 PF02254 TrkA-N domain D1095_05510 PF01295 Adenylate cyclase, class-I D1095_05510 PF12633 Adenylate cyclase NT domain D1095_05515 PF02801 Beta-ketoacyl synthase, C-terminal domain D1095_05515 PF00109 Beta-ketoacyl synthase, N-terminal domain D1095_05525 PF04076 Bacterial OB fold (BOF) protein D1095_05540 PF00072 Response regulator receiver domain D1095_05540 PF00486 Transcriptional regulatory protein, C terminal D1095_05545 PF08521 Two-component sensor kinase N-terminal D1095_05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_05545 PF00512 His Kinase A (phospho-acceptor) domain D1095_05550 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D1095_05555 PF02699 Preprotein translocase subunit D1095_05560 PF13721 SecD export protein N-terminal TM region D1095_05560 PF02355 Protein export membrane protein D1095_05560 PF07549 SecD/SecF GG Motif D1095_05565 PF02355 Protein export membrane protein D1095_05565 PF07549 SecD/SecF GG Motif D1095_05570 PF00210 Ferritin-like domain D1095_05575 PF00210 Ferritin-like domain D1095_05580 PF00860 Permease family D1095_05585 PF02545 Maf-like protein D1095_05595 PF02926 THUMP domain D1095_05595 PF02568 Thiamine biosynthesis protein (ThiI) D1095_05600 PF00709 Adenylosuccinate synthetase D1095_05605 PF01145 SPFH domain / Band 7 family D1095_05610 PF01145 SPFH domain / Band 7 family D1095_05615 PF00085 Thioredoxin D1095_05620 PF00860 Permease family D1095_05625 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1095_05625 PF02772 S-adenosylmethionine synthetase, central domain D1095_05625 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1095_05635 PF13520 Amino acid permease D1095_05640 PF13520 Amino acid permease D1095_05650 PF01546 Peptidase family M20/M25/M40 D1095_05650 PF07687 Peptidase dimerisation domain D1095_05655 PF03922 OmpW family D1095_05660 PF10431 C-terminal, D2-small domain, of ClpB protein D1095_05660 PF02861 Clp amino terminal domain, pathogenicity island component D1095_05660 PF17871 AAA lid domain D1095_05660 PF00004 ATPase family associated with various cellular activities (AAA) D1095_05660 PF07724 AAA domain (Cdc48 subfamily) D1095_05665 PF01758 Sodium Bile acid symporter family D1095_05670 PF03960 ArsC family D1095_05680 PF00206 Lyase D1095_05680 PF10415 Fumarase C C-terminus D1095_05690 PF02769 AIR synthase related protein, C-terminal domain D1095_05690 PF00586 AIR synthase related protein, N-terminal domain D1095_05695 PF00728 Glycosyl hydrolase family 20, catalytic domain D1095_05695 PF07501 G5 domain D1095_05695 PF00746 LPXTG cell wall anchor motif D1095_05695 PF04650 YSIRK type signal peptide D1095_05700 PF06508 Queuosine biosynthesis protein QueC D1095_05705 PF01242 6-pyruvoyl tetrahydropterin synthase D1095_05710 PF04055 Radical SAM superfamily D1095_05725 PF02789 Cytosol aminopeptidase family, N-terminal domain D1095_05725 PF00883 Cytosol aminopeptidase family, catalytic domain D1095_05735 PF03739 Lipopolysaccharide export system permease LptF/LptG D1095_05740 PF03739 Lipopolysaccharide export system permease LptF/LptG D1095_05745 PF14579 Helix-hairpin-helix motif D1095_05745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1095_05745 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1095_05745 PF01336 OB-fold nucleic acid binding domain D1095_05745 PF02811 PHP domain D1095_05765 PF02222 ATP-grasp domain D1095_05765 PF01370 NAD dependent epimerase/dehydratase family D1095_05770 PF01553 Acyltransferase D1095_05775 PF00717 Peptidase S24-like D1095_05775 PF01726 LexA DNA binding domain D1095_05780 PF02976 DNA mismatch repair enzyme MutH D1095_05785 PF03741 Integral membrane protein TerC family D1095_05790 PF00933 Glycosyl hydrolase family 3 N terminal domain D1095_05795 PF05958 tRNA (Uracil-5-)-methyltransferase D1095_05800 PF03952 Enolase, N-terminal domain D1095_05800 PF00113 Enolase, C-terminal TIM barrel domain D1095_05805 PF00293 NUDIX domain D1095_05810 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) D1095_05815 PF09382 RQC domain D1095_05815 PF16124 RecQ zinc-binding D1095_05815 PF00570 HRDC domain D1095_05815 PF00271 Helicase conserved C-terminal domain D1095_05815 PF00270 DEAD/DEAH box helicase D1095_05820 PF01491 Frataxin-like domain D1095_05830 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1095_05835 PF00814 Glycoprotease family D1095_05840 PF13525 Outer membrane lipoprotein D1095_05845 PF00849 RNA pseudouridylate synthase D1095_05845 PF01479 S4 domain D1095_05850 PF14256 YwiC-like protein D1095_05855 PF00365 Phosphofructokinase D1095_05860 PF00266 Aminotransferase class-V D1095_05865 PF00565 Staphylococcal nuclease homologue D1095_05870 PF01235 Sodium:alanine symporter family D1095_05875 PF01594 AI-2E family transporter D1095_05885 PF01136 Peptidase family U32 D1095_05885 PF16325 Peptidase family U32 C-terminal domain D1095_05890 PF04932 O-Antigen ligase D1095_05895 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1095_05895 PF00534 Glycosyl transferases group 1 D1095_05900 PF01467 Cytidylyltransferase-like D1095_05905 PF00929 Exonuclease D1095_05910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1095_05915 PF01520 N-acetylmuramoyl-L-alanine amidase D1095_05915 PF01476 LysM domain D1095_05920 PF00342 Phosphoglucose isomerase D1095_05925 PF04380 Membrane fusogenic activity D1095_05950 PF08501 Shikimate dehydrogenase substrate binding domain D1095_05950 PF01488 Shikimate / quinate 5-dehydrogenase D1095_05950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1095_05955 PF01300 Telomere recombination D1095_05960 PF01396 Topoisomerase DNA binding C4 zinc finger D1095_05965 PF04266 ASCH domain D1095_05970 PF02631 RecX family D1095_05975 PF00154 recA bacterial DNA recombination protein D1095_05980 PF01063 Amino-transferase class IV D1095_05985 PF00425 chorismate binding enzyme D1095_05990 PF02646 RmuC family D1095_05995 PF00117 Glutamine amidotransferase class-I D1095_06000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1095_06000 PF03625 Domain of unknown function DUF302 D1095_06005 PF01336 OB-fold nucleic acid binding domain D1095_06005 PF00152 tRNA synthetases class II (D, K and N) D1095_06005 PF02938 GAD domain D1095_06010 PF00293 NUDIX domain D1095_06015 PF01709 Transcriptional regulator D1095_06025 PF02075 Crossover junction endodeoxyribonuclease RuvC D1095_06030 PF05193 Peptidase M16 inactive domain D1095_06030 PF00675 Insulinase (Peptidase family M16) D1095_06035 PF08267 Cobalamin-independent synthase, N-terminal domain D1095_06035 PF01717 Cobalamin-independent synthase, Catalytic domain D1095_06040 PF00939 Sodium:sulfate symporter transmembrane region D1095_06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_06045 PF03466 LysR substrate binding domain D1095_06050 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1095_06055 PF01479 S4 domain D1095_06055 PF00849 RNA pseudouridylate synthase D1095_06060 PF01300 Telomere recombination D1095_06070 PF04261 Dyp-type peroxidase family D1095_06075 PF00425 chorismate binding enzyme D1095_06075 PF04715 Anthranilate synthase component I, N terminal region D1095_06080 PF00117 Glutamine amidotransferase class-I D1095_06085 PF00591 Glycosyl transferase family, a/b domain D1095_06085 PF02885 Glycosyl transferase family, helical bundle domain D1095_06090 PF08241 Methyltransferase domain D1095_06095 PF16036 Chalcone isomerase-like D1095_06100 PF04325 Protein of unknown function (DUF465) D1095_06105 PF01281 Ribosomal protein L9, N-terminal domain D1095_06105 PF03948 Ribosomal protein L9, C-terminal domain D1095_06110 PF01084 Ribosomal protein S18 D1095_06115 PF00436 Single-strand binding protein family D1095_06120 PF01250 Ribosomal protein S6 D1095_06125 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1095_06125 PF02843 Phosphoribosylglycinamide synthetase, C domain D1095_06125 PF02844 Phosphoribosylglycinamide synthetase, N domain D1095_06130 PF04973 Nicotinamide mononucleotide transporter D1095_06135 PF09976 Tetratricopeptide repeat-like domain D1095_06140 PF13393 Histidyl-tRNA synthetase D1095_06140 PF03129 Anticodon binding domain D1095_06145 PF04551 GcpE protein D1095_06150 PF13464 Domain of unknown function (DUF4115) D1095_06155 PF01740 STAS domain D1095_06155 PF00916 Sulfate permease family D1095_06160 PF14698 Argininosuccinate lyase C-terminal D1095_06160 PF00206 Lyase D1095_06165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D1095_06165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D1095_06170 PF02254 TrkA-N domain D1095_06170 PF00999 Sodium/hydrogen exchanger family D1095_06185 PF03466 LysR substrate binding domain D1095_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_06205 PF03466 LysR substrate binding domain D1095_06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_06210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1095_06215 PF00296 Luciferase-like monooxygenase D1095_06220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1095_06220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1095_06225 PF00881 Nitroreductase family D1095_06230 PF01914 MarC family integral membrane protein D1095_06240 PF00756 Putative esterase D1095_06245 PF02798 Glutathione S-transferase, N-terminal domain D1095_06260 PF08240 Alcohol dehydrogenase GroES-like domain D1095_06260 PF00107 Zinc-binding dehydrogenase D1095_06265 PF02028 BCCT, betaine/carnitine/choline family transporter D1095_06280 PF03595 Voltage-dependent anion channel D1095_06285 PF13419 Haloacid dehalogenase-like hydrolase D1095_06300 PF00664 ABC transporter transmembrane region D1095_06300 PF00005 ABC transporter D1095_06305 PF02664 S-Ribosylhomocysteinase (LuxS) D1095_06310 PF02470 MlaD protein D1095_06315 PF01475 Ferric uptake regulator family D1095_06320 PF00258 Flavodoxin D1095_06325 PF01402 Ribbon-helix-helix protein, copG family D1095_06330 PF04073 Aminoacyl-tRNA editing domain D1095_06340 PF00860 Permease family D1095_06345 PF02635 DsrE/DsrF-like family D1095_06355 PF01176 Translation initiation factor 1A / IF-1 D1095_06360 PF10144 Bacterial virulence factor haemolysin D1095_06365 PF18429 Domain of unknown function (DUF5609) D1095_06370 PF04461 Protein of unknown function (DUF520) D1095_06375 PF00343 Carbohydrate phosphorylase D1095_06380 PF17874 MalT-like TPR region D1095_06380 PF00196 Bacterial regulatory proteins, luxR family D1095_06385 PF07148 Maltose operon periplasmic protein precursor (MalM) D1095_06390 PF02264 LamB porin D1095_06395 PF00005 ABC transporter D1095_06395 PF17912 MalK OB fold domain D1095_06400 PF01547 Bacterial extracellular solute-binding protein D1095_06405 PF14785 Maltose transport system permease protein MalF P2 domain D1095_06405 PF00528 Binding-protein-dependent transport system inner membrane component D1095_06410 PF00528 Binding-protein-dependent transport system inner membrane component D1095_06415 PF02446 4-alpha-glucanotransferase D1095_06420 PF02554 Carbon starvation protein CstA D1095_06425 PF01026 TatD related DNase D1095_06430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1095_06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1095_06435 PF03350 Uncharacterized protein family, UPF0114 D1095_06440 PF00881 Nitroreductase family D1095_06455 PF00005 ABC transporter D1095_06460 PF01116 Fructose-bisphosphate aldolase class-II D1095_06465 PF00162 Phosphoglycerate kinase D1095_06470 PF00939 Sodium:sulfate symporter transmembrane region D1095_06475 PF00939 Sodium:sulfate symporter transmembrane region D1095_06480 PF00939 Sodium:sulfate symporter transmembrane region D1095_06485 PF01751 Toprim domain D1095_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_06485 PF00204 DNA gyrase B D1095_06485 PF00986 DNA gyrase B subunit, carboxyl terminus D1095_06490 PF00512 His Kinase A (phospho-acceptor) domain D1095_06490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1095_06495 PF00486 Transcriptional regulatory protein, C terminal D1095_06495 PF00072 Response regulator receiver domain D1095_06500 PF00005 ABC transporter D1095_06505 PF00528 Binding-protein-dependent transport system inner membrane component D1095_06510 PF00528 Binding-protein-dependent transport system inner membrane component D1095_06515 PF12849 PBP superfamily domain D1095_06520 PF09278 MerR, DNA binding D1095_06520 PF00376 MerR family regulatory protein D1095_06530 PF00403 Heavy-metal-associated domain D1095_06535 PF00403 Heavy-metal-associated domain D1095_06540 PF00106 short chain dehydrogenase D1095_06545 PF00881 Nitroreductase family D1095_06550 PF01343 Peptidase family S49 D1095_06555 PF00445 Ribonuclease T2 family D1095_06560 PF17283 SprT-like zinc ribbon domain D1095_06560 PF10263 SprT-like family D1095_06565 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1095_06570 PF16921 Tex protein YqgF-like domain D1095_06570 PF09371 Tex-like protein N-terminal domain D1095_06570 PF00575 S1 RNA binding domain D1095_06570 PF17674 HHH domain D1095_06580 PF04055 Radical SAM superfamily D1095_06600 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1095_06610 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D1095_06615 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D1095_06620 PF03966 Trm112p-like protein D1095_06625 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1095_06630 PF10431 C-terminal, D2-small domain, of ClpB protein D1095_06630 PF06689 ClpX C4-type zinc finger D1095_06630 PF07724 AAA domain (Cdc48 subfamily) D1095_06635 PF00574 Clp protease D1095_06640 PF02657 Fe-S metabolism associated domain D1095_06655 PF00929 Exonuclease D1095_06660 PF00005 ABC transporter D1095_06660 PF12848 ABC transporter D1095_06665 PF02627 Carboxymuconolactone decarboxylase family D1095_06680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1095_06685 PF01722 BolA-like protein D1095_06695 PF05494 MlaC protein D1095_06700 PF02470 MlaD protein D1095_06705 PF02405 Permease MlaE D1095_06710 PF00005 ABC transporter D1095_06715 PF00595 PDZ domain D1095_06720 PF08338 Domain of unknown function (DUF1731) D1095_06720 PF01370 NAD dependent epimerase/dehydratase family D1095_06725 PF01316 Arginine repressor, DNA binding domain D1095_06725 PF02863 Arginine repressor, C-terminal domain D1095_06730 PF00056 lactate/malate dehydrogenase, NAD binding domain D1095_06730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1095_06740 PF05191 Adenylate kinase, active site lid D1095_06750 PF07690 Major Facilitator Superfamily D1095_06755 PF01370 NAD dependent epimerase/dehydratase family D1095_06760 PF00533 BRCA1 C Terminus (BRCT) domain D1095_06760 PF01653 NAD-dependent DNA ligase adenylation domain D1095_06760 PF03120 NAD-dependent DNA ligase OB-fold domain D1095_06760 PF12826 Helix-hairpin-helix motif D1095_06760 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1095_06765 PF04354 ZipA, C-terminal FtsZ-binding domain D1095_06780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1095_06780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D1095_06790 PF01177 Asp/Glu/Hydantoin racemase D1095_06795 PF07690 Major Facilitator Superfamily D1095_06800 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1095_06805 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1095_06805 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1095_06810 PF00459 Inositol monophosphatase family D1095_06815 PF00293 NUDIX domain D1095_06820 PF01479 S4 domain D1095_06825 PF01430 Hsp33 protein D1095_06830 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1095_06835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1095_06835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1095_06840 PF00696 Amino acid kinase family D1095_06850 PF02378 Phosphotransferase system, EIIC D1095_06850 PF00367 phosphotransferase system, EIIB D1095_06855 PF00005 ABC transporter D1095_06860 PF00528 Binding-protein-dependent transport system inner membrane component D1095_06865 PF00381 PTS HPr component phosphorylation site D1095_06870 PF02896 PEP-utilising enzyme, TIM barrel domain D1095_06870 PF00391 PEP-utilising enzyme, mobile domain D1095_06870 PF05524 PEP-utilising enzyme, N-terminal D1095_06875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1095_06880 PF00919 Uncharacterized protein family UPF0004 D1095_06880 PF01938 TRAM domain D1095_06880 PF04055 Radical SAM superfamily D1095_06885 PF00580 UvrD/REP helicase N-terminal domain D1095_06885 PF13361 UvrD-like helicase C-terminal domain D1095_06890 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1095_06895 PF01924 Hydrogenase formation hypA family D1095_06900 PF00586 AIR synthase related protein, N-terminal domain D1095_06900 PF02769 AIR synthase related protein, C-terminal domain D1095_06905 PF13533 Biotin-lipoyl like D1095_06910 PF00005 ABC transporter D1095_06910 PF03412 Peptidase C39 family D1095_06910 PF00664 ABC transporter transmembrane region D1095_06915 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1095_06915 PF02382 N-terminal domain in RTX protein D1095_06915 PF08339 RTX C-terminal domain D1095_06920 PF02794 RTX toxin acyltransferase family D1095_06925 PF07503 HypF finger D1095_06925 PF01300 Telomere recombination D1095_06925 PF17788 HypF Kae1-like domain D1095_06925 PF00708 Acylphosphatase D1095_06930 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D1095_06930 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1095_06935 PF13247 4Fe-4S dicluster domain D1095_06940 PF03916 Polysulphide reductase, NrfD D1095_06945 PF00374 Nickel-dependent hydrogenase D1095_06950 PF01750 Hydrogenase maturation protease D1095_06955 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D1095_06960 PF01455 HupF/HypC family D1095_06965 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D1095_07000 PF00270 DEAD/DEAH box helicase D1095_07000 PF00271 Helicase conserved C-terminal domain D1095_07000 PF03461 TRCF domain D1095_07000 PF17757 UvrB interaction domain D1095_07000 PF02559 CarD-like/TRCF domain D1095_07005 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1095_07005 PF01433 Peptidase family M1 domain D1095_07005 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1095_07010 PF02660 Glycerol-3-phosphate acyltransferase D1095_07015 PF02152 Dihydroneopterin aldolase D1095_07020 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D1095_07020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1095_07025 PF18075 FtsX extracellular domain D1095_07030 PF00005 ABC transporter D1095_07035 PF02881 SRP54-type protein, helical bundle domain D1095_07035 PF00448 SRP54-type protein, GTPase domain D1095_07045 PF04269 Protein of unknown function, DUF440 D1095_07050 PF01613 Flavin reductase like domain D1095_07055 PF09313 Domain of unknown function (DUF1971) D1095_07055 PF03848 Tellurite resistance protein TehB D1095_07060 PF00528 Binding-protein-dependent transport system inner membrane component D1095_07065 PF00528 Binding-protein-dependent transport system inner membrane component D1095_07070 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1095_07075 PF00005 ABC transporter D1095_07080 PF01161 Phosphatidylethanolamine-binding protein D1095_07085 PF01699 Sodium/calcium exchanger protein D1095_07090 PF01381 Helix-turn-helix D1095_07100 PF11412 Disulphide bond corrector protein DsbC D1095_07100 PF13098 Thioredoxin-like domain D1095_07100 PF02683 Cytochrome C biogenesis protein transmembrane region D1095_07105 PF04315 Elongation factor P hydroxylase D1095_07110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1095_07115 PF04348 LppC putative lipoprotein D1095_07120 PF02021 Uncharacterised protein family UPF0102 D1095_07125 PF13580 SIS domain D1095_07130 PF04972 BON domain D1095_07135 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1095_07135 PF01464 Transglycosylase SLT domain D1095_07155 PF01578 Cytochrome C assembly protein D1095_07155 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1095_07160 PF03100 CcmE D1095_07165 PF04995 Heme exporter protein D (CcmD) D1095_07170 PF01578 Cytochrome C assembly protein D1095_07175 PF03379 CcmB protein D1095_07180 PF00005 ABC transporter D1095_07185 PF00308 Bacterial dnaA protein D1095_07230 PF04277 Oxaloacetate decarboxylase, gamma chain D1095_07235 PF02436 Conserved carboxylase domain D1095_07235 PF00364 Biotin-requiring enzyme D1095_07235 PF00682 HMGL-like D1095_07240 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D1095_07245 PF08274 PhnA Zinc-Ribbon D1095_07245 PF03831 PhnA domain D1095_07250 PF00034 Cytochrome c D1095_07250 PF14376 Haem-binding domain D1095_07250 PF03150 Di-haem cytochrome c peroxidase D1095_07255 PF02594 Uncharacterised ACR, YggU family COG1872 D1095_07260 PF02325 YGGT family D1095_07265 PF04320 Protein with unknown function (DUF469) D1095_07270 PF02390 Putative methyltransferase D1095_07275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1095_07275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1095_07280 PF02504 Fatty acid synthesis protein D1095_07285 PF01783 Ribosomal L32p protein family D1095_07290 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1095_07295 PF01578 Cytochrome C assembly protein D1095_07300 PF00571 CBS domain D1095_07300 PF03471 Transporter associated domain D1095_07300 PF01595 Cyclin M transmembrane N-terminal domain D1095_07305 PF00209 Sodium:neurotransmitter symporter family D1095_07315 PF03830 PTS system sorbose subfamily IIB component D1095_07315 PF03610 PTS system fructose IIA component D1095_07320 PF03609 PTS system sorbose-specific iic component D1095_07325 PF03613 PTS system mannose/fructose/sorbose family IID component D1095_07330 PF06173 Protein of unknown function (DUF986) D1095_07335 PF01238 Phosphomannose isomerase type I D1095_07350 PF00664 ABC transporter transmembrane region D1095_07350 PF00005 ABC transporter D1095_07350 PF03412 Peptidase C39 family D1095_07355 PF08339 RTX C-terminal domain D1095_07355 PF02382 N-terminal domain in RTX protein D1095_07355 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1095_07370 PF00005 ABC transporter D1095_07370 PF08402 TOBE domain D1095_07375 PF02875 Mur ligase family, glutamate ligase domain D1095_07375 PF01225 Mur ligase family, catalytic domain D1095_07375 PF08245 Mur ligase middle domain D1095_07380 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D1095_07390 PF00462 Glutaredoxin D1095_07390 PF08534 Redoxin D1095_07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_07395 PF03466 LysR substrate binding domain D1095_07400 PF00440 Bacterial regulatory proteins, tetR family D1095_07405 PF00578 AhpC/TSA family D1095_07410 PF17876 Cold shock domain D1095_07410 PF08461 Ribonuclease R winged-helix domain D1095_07410 PF08206 Ribonuclease B OB domain D1095_07410 PF00773 RNB domain D1095_07410 PF00575 S1 RNA binding domain D1095_07420 PF00579 tRNA synthetases class I (W and Y) D1095_07420 PF01479 S4 domain D1095_07425 PF04539 Sigma-70 region 3 D1095_07425 PF04545 Sigma-70, region 4 D1095_07425 PF04542 Sigma-70 region 2 D1095_07425 PF00140 Sigma-70 factor, region 1.2 D1095_07425 PF03979 Sigma-70 factor, region 1.1 D1095_07425 PF04546 Sigma-70, non-essential region D1095_07430 PF10410 DnaB-helicase binding domain of primase D1095_07430 PF08275 DNA primase catalytic core, N-terminal domain D1095_07430 PF01807 CHC2 zinc finger D1095_07430 PF08278 DNA primase DnaG DnaB-binding D1095_07435 PF01165 Ribosomal protein S21 D1095_07440 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D1095_07445 PF04321 RmlD substrate binding domain D1095_07450 PF00483 Nucleotidyl transferase D1095_07455 PF16363 GDP-mannose 4,6 dehydratase D1095_07460 PF02397 Bacterial sugar transferase D1095_07485 PF01501 Glycosyl transferase family 8 D1095_07485 PF00535 Glycosyl transferase family 2 D1095_07495 PF13439 Glycosyltransferase Family 4 D1095_07495 PF00534 Glycosyl transferases group 1 D1095_07505 PF01521 Iron-sulphur cluster biosynthesis D1095_07510 PF01040 UbiA prenyltransferase family D1095_07520 PF18389 TrmO C-terminal domain D1095_07520 PF01980 tRNA-methyltransferase O D1095_07530 PF00230 Major intrinsic protein D1095_07535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1095_07540 PF00585 C-terminal regulatory domain of Threonine dehydratase D1095_07540 PF00291 Pyridoxal-phosphate dependent enzyme D1095_07545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1095_07545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1095_07545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1095_07545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1095_07550 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1095_07555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1095_07555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1095_07570 PF01297 Zinc-uptake complex component A periplasmic D1095_07575 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D1095_07580 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D1095_07590 PF10150 Ribonuclease E/G family D1095_07590 PF00575 S1 RNA binding domain D1095_07590 PF12111 Polyribonucleotide phosphorylase C terminal D1095_07605 PF02525 Flavodoxin-like fold D1095_07610 PF12838 4Fe-4S dicluster domain D1095_07610 PF13187 4Fe-4S dicluster domain D1095_07620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1095_07620 PF00384 Molybdopterin oxidoreductase D1095_07620 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1095_07620 PF01568 Molydopterin dinucleotide binding domain D1095_07625 PF12800 4Fe-4S binding domain D1095_07625 PF12838 4Fe-4S dicluster domain D1095_07630 PF12801 4Fe-4S binding domain D1095_07630 PF12837 4Fe-4S binding domain D1095_07635 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D1095_07640 PF03264 NapC/NirT cytochrome c family, N-terminal region D1095_07645 PF14849 YidC periplasmic domain D1095_07645 PF02096 60Kd inner membrane protein D1095_07650 PF03061 Thioesterase superfamily D1095_07655 PF13183 4Fe-4S dicluster domain D1095_07655 PF01565 FAD binding domain D1095_07655 PF02913 FAD linked oxidases, C-terminal domain D1095_07660 PF01389 OmpA-like transmembrane domain D1095_07660 PF00691 OmpA family D1095_07665 PF13407 Periplasmic binding protein domain D1095_07670 PF00005 ABC transporter D1095_07675 PF02653 Branched-chain amino acid transport system / permease component D1095_07695 PF06039 Malate:quinone oxidoreductase (Mqo) D1095_07700 PF00501 AMP-binding enzyme D1095_07705 PF00248 Aldo/keto reductase family D1095_07710 PF04175 Protein of unknown function (DUF406) D1095_07715 PF03222 Tryptophan/tyrosine permease family D1095_07725 PF02655 ATP-grasp domain D1095_07725 PF18419 ATP-grasp-like domain D1095_07725 PF04262 Glutamate-cysteine ligase D1095_07730 PF01420 Type I restriction modification DNA specificity domain D1095_07735 PF00589 Phage integrase family D1095_07735 PF02899 Phage integrase, N-terminal SAM-like domain D1095_07740 PF01420 Type I restriction modification DNA specificity domain D1095_07750 PF02384 N-6 DNA Methylase D1095_07750 PF12161 HsdM N-terminal domain D1095_07755 PF00271 Helicase conserved C-terminal domain D1095_07755 PF08463 EcoEI R protein C-terminal D1095_07755 PF04851 Type III restriction enzyme, res subunit D1095_07755 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1095_07760 PF02666 Phosphatidylserine decarboxylase D1095_07770 PF04225 Opacity-associated protein A LysM-like domain D1095_07770 PF08525 Opacity-associated protein A N-terminal motif D1095_07780 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1095_07785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1095_07790 PF00164 Ribosomal protein S12/S23 D1095_07795 PF00177 Ribosomal protein S7p/S5e D1095_07800 PF03144 Elongation factor Tu domain 2 D1095_07800 PF00009 Elongation factor Tu GTP binding domain D1095_07800 PF03764 Elongation factor G, domain IV D1095_07800 PF14492 Elongation Factor G, domain II D1095_07800 PF00679 Elongation factor G C-terminus D1095_07805 PF03144 Elongation factor Tu domain 2 D1095_07805 PF00009 Elongation factor Tu GTP binding domain D1095_07805 PF03143 Elongation factor Tu C-terminal domain D1095_07810 PF00132 Bacterial transferase hexapeptide (six repeats) D1095_07810 PF06426 Serine acetyltransferase, N-terminal D1095_07815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1095_07815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1095_07820 PF02556 Preprotein translocase subunit SecB D1095_07825 PF00581 Rhodanese-like domain D1095_07830 PF05697 Bacterial trigger factor protein (TF) D1095_07830 PF05698 Bacterial trigger factor protein (TF) C-terminus D1095_07830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1095_07835 PF01476 LysM domain D1095_07840 PF04364 DNA polymerase III chi subunit, HolC D1095_07845 PF13673 Acetyltransferase (GNAT) domain D1095_07855 PF00133 tRNA synthetases class I (I, L, M and V) D1095_07855 PF08264 Anticodon-binding domain of tRNA D1095_07855 PF10458 Valyl tRNA synthetase tRNA binding arm D1095_07865 PF14821 Threonine synthase N terminus D1095_07865 PF00291 Pyridoxal-phosphate dependent enzyme D1095_07870 PF02142 MGS-like domain D1095_07875 PF12805 FUSC-like inner membrane protein yccS D1095_07890 PF00210 Ferritin-like domain D1095_07895 PF02678 Pirin D1095_07895 PF17954 Quercetinase C-terminal cupin domain D1095_07905 PF05167 Uncharacterised ACR (DUF711) D1095_07910 PF10396 GTP-binding protein TrmE N-terminus D1095_07910 PF01926 50S ribosome-binding GTPase D1095_07910 PF12631 MnmE helical domain D1095_07915 PF08534 Redoxin D1095_07920 PF01553 Acyltransferase D1095_07925 PF07732 Multicopper oxidase D1095_07925 PF07731 Multicopper oxidase D1095_07930 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1095_07940 PF08543 Phosphomethylpyrimidine kinase D1095_07970 PF03144 Elongation factor Tu domain 2 D1095_07970 PF00009 Elongation factor Tu GTP binding domain D1095_07970 PF03143 Elongation factor Tu C-terminal domain D1095_07995 PF00485 Phosphoribulokinase / Uridine kinase family D1095_08000 PF08534 Redoxin D1095_08005 PF03918 Cytochrome C biogenesis protein D1095_08010 PF03918 Cytochrome C biogenesis protein D1095_08015 PF00994 Probable molybdopterin binding domain D1095_08020 PF00543 Nitrogen regulatory protein P-II D1095_08025 PF01252 Signal peptidase (SPase) II D1095_08030 PF02401 LytB protein D1095_08035 PF03937 Flavinator of succinate dehydrogenase D1095_08045 PF04055 Radical SAM superfamily D1095_08050 PF02798 Glutathione S-transferase, N-terminal domain D1095_08050 PF00043 Glutathione S-transferase, C-terminal domain D1095_08055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1095_08055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1095_08065 PF02313 Fumarate reductase subunit D D1095_08070 PF02300 Fumarate reductase subunit C D1095_08075 PF13183 4Fe-4S dicluster domain D1095_08075 PF13085 2Fe-2S iron-sulfur cluster binding domain D1095_08080 PF02910 Fumarate reductase flavoprotein C-term D1095_08080 PF00890 FAD binding domain D1095_08085 PF00152 tRNA synthetases class II (D, K and N) D1095_08090 PF01678 Diaminopimelate epimerase D1095_08095 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1095_08100 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1095_08110 PF03702 Anhydro-N-acetylmuramic acid kinase D1095_08115 PF01380 SIS domain D1095_08135 PF01523 Putative modulator of DNA gyrase D1095_08140 PF11734 TilS substrate C-terminal domain D1095_08140 PF09179 TilS substrate binding domain D1095_08140 PF01171 PP-loop family D1095_08150 PF00589 Phage integrase family D1095_08150 PF02899 Phage integrase, N-terminal SAM-like domain D1095_08205 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1095_08210 PF06899 WzyE protein, O-antigen assembly polymerase D1095_08215 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D1095_08220 PF03063 Prismane/CO dehydrogenase family D1095_08225 PF00111 2Fe-2S iron-sulfur cluster binding domain D1095_08225 PF00175 Oxidoreductase NAD-binding domain D1095_08225 PF00970 Oxidoreductase FAD-binding domain D1095_08230 PF01943 Polysaccharide biosynthesis protein D1095_08235 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1095_08245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1095_08245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1095_08245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1095_08250 PF02350 UDP-N-acetylglucosamine 2-epimerase D1095_08260 PF00953 Glycosyl transferase family 4 D1095_08265 PF00202 Aminotransferase class-III D1095_08275 PF03023 Lipid II flippase MurJ D1095_08280 PF01649 Ribosomal protein S20 D1095_08285 PF02254 TrkA-N domain D1095_08285 PF02080 TrkA-C domain D1095_08290 PF01029 NusB family D1095_08290 PF01189 16S rRNA methyltransferase RsmB/F D1095_08295 PF09107 Elongation factor SelB, winged helix D1095_08295 PF09106 Elongation factor SelB, winged helix D1095_08295 PF03144 Elongation factor Tu domain 2 D1095_08295 PF00009 Elongation factor Tu GTP binding domain D1095_08300 PF03841 L-seryl-tRNA selenium transferase D1095_08310 PF00258 Flavodoxin D1095_08320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1095_08320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1095_08335 PF00593 TonB dependent receptor D1095_08335 PF07715 TonB-dependent Receptor Plug Domain D1095_08340 PF17484 N-Lobe handle Tf-binding protein B D1095_08340 PF17483 C-lobe handle domain of Tf-binding protein B D1095_08340 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1095_08345 PF02472 Biopolymer transport protein ExbD/TolR D1095_08350 PF01618 MotA/TolQ/ExbB proton channel family D1095_08360 PF03956 Lysine exporter LysO D1095_08370 PF17311 Family of unknown function (DUF5358) D1095_08390 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D1095_08400 PF01467 Cytidylyltransferase-like D1095_08410 PF02563 Polysaccharide biosynthesis/export protein D1095_08420 PF01061 ABC-2 type transporter D1095_08425 PF00005 ABC transporter D1095_08430 PF00005 ABC transporter D1095_08435 PF00551 Formyl transferase D1095_08435 PF02911 Formyl transferase, C-terminal domain D1095_08445 PF09186 Domain of unknown function (DUF1949) D1095_08445 PF01205 Uncharacterized protein family UPF0029 D1095_08450 PF02386 Cation transport protein D1095_08455 PF12724 Flavodoxin domain D1095_08460 PF01741 Large-conductance mechanosensitive channel, MscL D1095_08465 PF04055 Radical SAM superfamily D1095_08470 PF03099 Biotin/lipoate A/B protein ligase family D1095_08475 PF04359 Protein of unknown function (DUF493) D1095_08480 PF07943 Penicillin-binding protein 5, C-terminal domain D1095_08480 PF00768 D-alanyl-D-alanine carboxypeptidase D1095_08485 PF03330 Lytic transglycolase D1095_08490 PF01098 Cell cycle protein D1095_08495 PF03717 Penicillin-binding Protein dimerisation domain D1095_08495 PF00905 Penicillin binding protein transpeptidase domain D1095_08500 PF02590 Predicted SPOUT methyltransferase D1095_08510 PF05190 MutS family domain IV D1095_08510 PF05192 MutS domain III D1095_08510 PF01624 MutS domain I D1095_08510 PF00488 MutS domain V D1095_08510 PF05188 MutS domain II D1095_08515 PF00005 ABC transporter D1095_08525 PF03313 Serine dehydratase alpha chain D1095_08530 PF04405 Domain of Unknown function (DUF542) D1095_08530 PF01814 Hemerythrin HHE cation binding domain D1095_08535 PF00893 Small Multidrug Resistance protein D1095_08540 PF04175 Protein of unknown function (DUF406) D1095_08555 PF01774 UreD urease accessory protein D1095_08560 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1095_08565 PF01730 UreF D1095_08570 PF02814 UreE urease accessory protein, N-terminal domain D1095_08570 PF05194 UreE urease accessory protein, C-terminal domain D1095_08580 PF00449 Urease alpha-subunit, N-terminal domain D1095_08580 PF01979 Amidohydrolase family D1095_08585 PF00699 Urease beta subunit D1095_08590 PF00547 Urease, gamma subunit D1095_08600 PF00005 ABC transporter D1095_08610 PF01891 Cobalt uptake substrate-specific transmembrane region D1095_08620 PF10670 Domain of unknown function (DUF4198) D1095_08625 PF03466 LysR substrate binding domain D1095_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_08635 PF03600 Citrate transporter D1095_08635 PF02080 TrkA-C domain D1095_08640 PF05068 Mannitol repressor D1095_08645 PF01232 Mannitol dehydrogenase Rossmann domain D1095_08645 PF08125 Mannitol dehydrogenase C-terminal domain D1095_08650 PF02378 Phosphotransferase system, EIIC D1095_08650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1095_08650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1095_08655 PF01380 SIS domain D1095_08660 PF08220 DeoR-like helix-turn-helix domain D1095_08660 PF00455 DeoR C terminal sensor domain D1095_08675 PF18071 HMW1C N-terminal D1095_08675 PF18254 HMW1 domain 2 D1095_08680 PF00919 Uncharacterized protein family UPF0004 D1095_08680 PF18693 TRAM domain D1095_08680 PF04055 Radical SAM superfamily D1095_08685 PF01048 Phosphorylase superfamily D1095_08695 PF04102 SlyX D1095_08700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1095_08700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1095_08705 PF08348 YheO-like PAS domain D1095_08705 PF13309 HTH domain D1095_08710 PF02635 DsrE/DsrF-like family D1095_08715 PF02635 DsrE/DsrF-like family D1095_08720 PF04077 DsrH like protein D1095_08750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1095_08755 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1095_08755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1095_08760 PF00231 ATP synthase D1095_08765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1095_08765 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1095_08765 PF00306 ATP synthase alpha/beta chain, C terminal domain D1095_08770 PF00213 ATP synthase delta (OSCP) subunit D1095_08775 PF00430 ATP synthase B/B' CF(0) D1095_08780 PF00137 ATP synthase subunit C D1095_08785 PF00119 ATP synthase A chain D1095_08795 PF02527 rRNA small subunit methyltransferase G D1095_08800 PF13932 GidA associated domain D1095_08800 PF01134 Glucose inhibited division protein A D1095_08810 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1095_08815 PF02810 SEC-C motif D1095_08825 PF03613 PTS system mannose/fructose/sorbose family IID component D1095_08830 PF03609 PTS system sorbose-specific iic component D1095_08835 PF03610 PTS system fructose IIA component D1095_08835 PF03830 PTS system sorbose subfamily IIB component D1095_08840 PF02447 GntP family permease D1095_08845 PF01202 Shikimate kinase D1095_08850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1095_08850 PF00356 Bacterial regulatory proteins, lacI family D1095_08855 PF00356 Bacterial regulatory proteins, lacI family D1095_08860 PF05025 RbsD / FucU transport protein family D1095_08865 PF00005 ABC transporter D1095_08870 PF02653 Branched-chain amino acid transport system / permease component D1095_08875 PF13407 Periplasmic binding protein domain D1095_08880 PF00294 pfkB family carbohydrate kinase D1095_08885 PF00384 Molybdopterin oxidoreductase D1095_08885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1095_08885 PF01568 Molydopterin dinucleotide binding domain D1095_08890 PF12800 4Fe-4S binding domain D1095_08890 PF13247 4Fe-4S dicluster domain D1095_08895 PF04976 DMSO reductase anchor subunit (DmsC) D1095_08900 PF02613 Nitrate reductase delta subunit D1095_08905 PF00037 4Fe-4S binding domain D1095_08905 PF12838 4Fe-4S dicluster domain D1095_08930 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1095_08930 PF02769 AIR synthase related protein, C-terminal domain D1095_08930 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1095_08935 PF00455 DeoR C terminal sensor domain D1095_08935 PF08220 DeoR-like helix-turn-helix domain D1095_08940 PF07881 L-fucose isomerase, first N-terminal domain D1095_08940 PF07882 L-fucose isomerase, second N-terminal domain D1095_08940 PF02952 L-fucose isomerase, C-terminal domain D1095_08945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1095_08945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1095_08950 PF05025 RbsD / FucU transport protein family D1095_08955 PF00596 Class II Aldolase and Adducin N-terminal domain D1095_08960 PF07690 Major Facilitator Superfamily D1095_08965 PF00465 Iron-containing alcohol dehydrogenase D1095_08970 PF07274 Protein of unknown function (DUF1440) D1095_08975 PF00528 Binding-protein-dependent transport system inner membrane component D1095_08980 PF00528 Binding-protein-dependent transport system inner membrane component D1095_08985 PF00005 ABC transporter D1095_08990 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1095_08995 PF05159 Capsule polysaccharide biosynthesis protein D1095_09000 PF05159 Capsule polysaccharide biosynthesis protein D1095_09010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1095_09015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1095_09020 PF03611 PTS system sugar-specific permease component D1095_09030 PF00455 DeoR C terminal sensor domain D1095_09030 PF08220 DeoR-like helix-turn-helix domain D1095_09035 PF01261 Xylose isomerase-like TIM barrel D1095_09040 PF00596 Class II Aldolase and Adducin N-terminal domain D1095_09045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1095_09045 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1095_09065 PF04575 Protein of unknown function (DUF560) D1095_09070 PF01370 NAD dependent epimerase/dehydratase family D1095_09075 PF01327 Polypeptide deformylase D1095_09080 PF17782 DprA winged helix domain D1095_09080 PF02481 DNA recombination-mediator protein A D1095_09085 PF03169 OPT oligopeptide transporter protein D1095_09090 PF03611 PTS system sugar-specific permease component D1095_09100 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1095_09105 PF00467 KOW motif D1095_09105 PF02357 Transcription termination factor nusG D1095_09110 PF03946 Ribosomal protein L11, N-terminal domain D1095_09110 PF00298 Ribosomal protein L11, RNA binding domain D1095_09115 PF00687 Ribosomal protein L1p/L10e family D1095_09120 PF00466 Ribosomal protein L10 D1095_09125 PF00542 Ribosomal protein L7/L12 C-terminal domain D1095_09125 PF16320 Ribosomal protein L7/L12 dimerisation domain D1095_09160 PF04560 RNA polymerase Rpb2, domain 7 D1095_09160 PF04561 RNA polymerase Rpb2, domain 2 D1095_09160 PF10385 RNA polymerase beta subunit external 1 domain D1095_09160 PF04563 RNA polymerase beta subunit D1095_09160 PF00562 RNA polymerase Rpb2, domain 6 D1095_09160 PF04565 RNA polymerase Rpb2, domain 3 D1095_09165 PF04997 RNA polymerase Rpb1, domain 1 D1095_09165 PF00623 RNA polymerase Rpb1, domain 2 D1095_09165 PF04983 RNA polymerase Rpb1, domain 3 D1095_09165 PF05000 RNA polymerase Rpb1, domain 4 D1095_09165 PF04998 RNA polymerase Rpb1, domain 5 D1095_09170 PF07669 Eco57I restriction-modification methylase D1095_09170 PF02384 N-6 DNA Methylase D1095_09175 PF09226 Restriction endonuclease HincII D1095_09180 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D1095_09185 PF01850 PIN domain D1095_09205 PF00004 ATPase family associated with various cellular activities (AAA) D1095_09205 PF10431 C-terminal, D2-small domain, of ClpB protein D1095_09205 PF07724 AAA domain (Cdc48 subfamily) D1095_09210 PF00227 Proteasome subunit D1095_09215 PF03749 Sugar fermentation stimulation protein RE domain D1095_09215 PF17746 SfsA N-terminal OB domain D1095_09220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1095_09225 PF00730 HhH-GPD superfamily base excision DNA repair protein D1095_09225 PF14815 NUDIX domain D1095_09230 PF04362 Bacterial Fe(2+) trafficking D1095_09235 PF01464 Transglycosylase SLT domain D1095_09235 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1095_09265 PF03796 DnaB-like helicase C terminal domain D1095_09265 PF00772 DnaB-like helicase N terminal domain D1095_09275 PF00589 Phage integrase family D1095_09275 PF02899 Phage integrase, N-terminal SAM-like domain D1095_09300 PF00005 ABC transporter D1095_09300 PF00664 ABC transporter transmembrane region D1095_09300 PF03412 Peptidase C39 family D1095_09305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1095_09305 PF00529 HlyD membrane-fusion protein of T1SS D1095_09320 PF02978 Signal peptide binding domain D1095_09320 PF02881 SRP54-type protein, helical bundle domain D1095_09320 PF00448 SRP54-type protein, GTPase domain D1095_09335 PF00149 Calcineurin-like phosphoesterase D1095_09335 PF02872 5'-nucleotidase, C-terminal domain D1095_09340 PF01494 FAD binding domain D1095_09345 PF01078 Magnesium chelatase, subunit ChlI D1095_09345 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1095_09355 PF00561 alpha/beta hydrolase fold D1095_09360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1095_09360 PF16582 Middle domain of thiamine pyrophosphate D1095_09360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1095_09365 PF13472 GDSL-like Lipase/Acylhydrolase family D1095_09365 PF02348 Cytidylyltransferase D1095_09370 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D1095_09375 PF00480 ROK family D1095_09380 PF00701 Dihydrodipicolinate synthetase family D1095_09385 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1095_09390 PF01979 Amidohydrolase family D1095_09395 PF10415 Fumarase C C-terminus D1095_09395 PF00206 Lyase D1095_09405 PF00338 Ribosomal protein S10p/S20e D1095_09410 PF00297 Ribosomal protein L3 D1095_09415 PF00573 Ribosomal protein L4/L1 family D1095_09420 PF00276 Ribosomal protein L23 D1095_09425 PF00181 Ribosomal Proteins L2, RNA binding domain D1095_09425 PF03947 Ribosomal Proteins L2, C-terminal domain D1095_09430 PF00203 Ribosomal protein S19 D1095_09435 PF00237 Ribosomal protein L22p/L17e D1095_09440 PF00189 Ribosomal protein S3, C-terminal domain D1095_09440 PF07650 KH domain D1095_09445 PF00252 Ribosomal protein L16p/L10e D1095_09450 PF00831 Ribosomal L29 protein D1095_09455 PF00366 Ribosomal protein S17 D1095_09460 PF00238 Ribosomal protein L14p/L23e D1095_09465 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1095_09465 PF00467 KOW motif D1095_09470 PF00281 Ribosomal protein L5 D1095_09470 PF00673 ribosomal L5P family C-terminus D1095_09475 PF00253 Ribosomal protein S14p/S29e D1095_09480 PF00410 Ribosomal protein S8 D1095_09485 PF00347 Ribosomal protein L6 D1095_09490 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1095_09495 PF00333 Ribosomal protein S5, N-terminal domain D1095_09495 PF03719 Ribosomal protein S5, C-terminal domain D1095_09500 PF00327 Ribosomal protein L30p/L7e D1095_09505 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1095_09510 PF00344 SecY translocase D1095_09515 PF00444 Ribosomal protein L36 D1095_09520 PF00416 Ribosomal protein S13/S18 D1095_09525 PF00411 Ribosomal protein S11 D1095_09530 PF00163 Ribosomal protein S4/S9 N-terminal domain D1095_09530 PF01479 S4 domain D1095_09535 PF01000 RNA polymerase Rpb3/RpoA insert domain D1095_09535 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1095_09535 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1095_09540 PF01196 Ribosomal protein L17 D1095_09545 PF00886 Ribosomal protein S16 D1095_09550 PF05239 PRC-barrel domain D1095_09550 PF01782 RimM N-terminal domain D1095_09555 PF01746 tRNA (Guanine-1)-methyltransferase D1095_09560 PF01245 Ribosomal protein L19 D1095_09565 PF08007 Cupin superfamily protein D1095_09570 PF01497 Periplasmic binding protein D1095_09575 PF01032 FecCD transport family D1095_09580 PF00005 ABC transporter D1095_09585 PF00127 Copper binding proteins, plastocyanin/azurin family D1095_09600 PF02613 Nitrate reductase delta subunit D1095_09605 PF01568 Molydopterin dinucleotide binding domain D1095_09605 PF18364 Molybdopterin oxidoreductase N-terminal domain D1095_09605 PF00384 Molybdopterin oxidoreductase D1095_09615 PF02091 Glycyl-tRNA synthetase alpha subunit D1095_09620 PF04480 Protein of unknown function (DUF559) D1095_09630 PF05746 DALR anticodon binding domain D1095_09630 PF02092 Glycyl-tRNA synthetase beta subunit D1095_09635 PF17347 Family of unknown function (DUF5377) D1095_09640 PF00589 Phage integrase family D1095_09640 PF02899 Phage integrase, N-terminal SAM-like domain D1095_09645 PF04304 Protein of unknown function (DUF454) D1095_09655 PF00149 Calcineurin-like phosphoesterase D1095_09660 PF07509 Protein of unknown function (DUF1523) D1095_09665 PF01026 TatD related DNase D1095_09680 PF00005 ABC transporter D1095_09680 PF02687 FtsX-like permease family D1095_09680 PF12704 MacB-like periplasmic core domain D1095_09685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1095_09690 PF06629 MltA-interacting protein MipA D1095_09695 PF09115 DNA polymerase III, delta subunit, C terminal D1095_09700 PF02223 Thymidylate kinase D1095_09705 PF02618 YceG-like family D1095_09720 PF00550 Phosphopantetheine attachment site D1095_09725 PF00834 Ribulose-phosphate 3 epimerase family D1095_09730 PF01197 Ribosomal protein L31 D1095_09735 PF00444 Ribosomal protein L36 D1095_09740 PF00912 Transglycosylase D1095_09740 PF00905 Penicillin binding protein transpeptidase domain D1095_09740 PF14814 Bifunctional transglycosylase second domain D1095_09745 PF00378 Enoyl-CoA hydratase/isomerase D1095_09750 PF04607 Region found in RelA / SpoT proteins D1095_09750 PF13291 ACT domain D1095_09750 PF02824 TGS domain D1095_09755 PF01192 RNA polymerase Rpb6 D1095_09760 PF00270 DEAD/DEAH box helicase D1095_09760 PF00271 Helicase conserved C-terminal domain D1095_09760 PF17191 RecG wedge domain D1095_09775 PF04073 Aminoacyl-tRNA editing domain D1095_09775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1095_09775 PF03129 Anticodon binding domain D1095_09785 PF04542 Sigma-70 region 2 D1095_09785 PF08281 Sigma-70, region 4 D1095_09790 PF00174 Oxidoreductase molybdopterin binding domain D1095_09795 PF01794 Ferric reductase like transmembrane component D1095_09800 PF00140 Sigma-70 factor, region 1.2 D1095_09800 PF04542 Sigma-70 region 2 D1095_09800 PF04545 Sigma-70, region 4 D1095_09805 PF07690 Major Facilitator Superfamily D1095_09825 PF03590 Aspartate-ammonia ligase D1095_09830 PF01037 Lrp/AsnC ligand binding domain D1095_09830 PF13404 AsnC-type helix-turn-helix domain D1095_09835 PF01048 Phosphorylase superfamily D1095_09840 PF04345 Chorismate lyase D1095_09845 PF01177 Asp/Glu/Hydantoin racemase D1095_09870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1095_09870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1095_09875 PF00667 FAD binding domain D1095_09875 PF00258 Flavodoxin D1095_09875 PF00175 Oxidoreductase NAD-binding domain D1095_09880 PF00009 Elongation factor Tu GTP binding domain D1095_09885 PF01507 Phosphoadenosine phosphosulfate reductase family D1095_09890 PF01507 Phosphoadenosine phosphosulfate reductase family D1095_09895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1095_09895 PF10414 Sirohaem synthase dimerisation region D1095_09895 PF14824 Sirohaem biosynthesis protein central D1095_09905 PF00528 Binding-protein-dependent transport system inner membrane component D1095_09910 PF00528 Binding-protein-dependent transport system inner membrane component D1095_09915 PF00005 ABC transporter D1095_09915 PF17850 CysA C-terminal regulatory domain D1095_09915 PF12857 TOBE-like domain D1095_09920 PF01070 FMN-dependent dehydrogenase D1095_09925 PF08279 HTH domain D1095_09925 PF03099 Biotin/lipoate A/B protein ligase family D1095_09925 PF02237 Biotin protein ligase C terminal domain D1095_09930 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1095_09930 PF01565 FAD binding domain D1095_09935 PF00691 OmpA family D1095_09935 PF01389 OmpA-like transmembrane domain D1095_09940 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1095_09940 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1095_09945 PF04403 Paraquat-inducible protein A D1095_09950 PF01841 Transglutaminase-like superfamily D1095_09960 PF00403 Heavy-metal-associated domain D1095_09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1095_09970 PF03466 LysR substrate binding domain D1095_09975 PF00132 Bacterial transferase hexapeptide (six repeats) D1095_09975 PF14602 Hexapeptide repeat of succinyl-transferase D1095_09975 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1095_09980 PF01220 Dehydroquinase class II D1095_09985 PF04488 Glycosyltransferase sugar-binding region containing DXD motif D1095_09990 PF00364 Biotin-requiring enzyme D1095_09995 PF02785 Biotin carboxylase C-terminal domain D1095_09995 PF00289 Biotin carboxylase, N-terminal domain D1095_09995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1095_10000 PF12804 MobA-like NTP transferase domain D1095_10005 PF06288 Protein of unknown function (DUF1040) D1095_10010 PF01323 DSBA-like thioredoxin domain D1095_10015 PF05036 Sporulation related domain D1095_10015 PF05036 Sporulation related domain D1095_10020 PF04445 Putative SAM-dependent methyltransferase D1095_10025 PF02557 D-alanyl-D-alanine carboxypeptidase D1095_10030 PF07687 Peptidase dimerisation domain D1095_10030 PF01546 Peptidase family M20/M25/M40 D1095_10035 PF03960 ArsC family D1095_10045 PF00809 Pterin binding enzyme D1095_10050 PF00849 RNA pseudouridylate synthase D1095_10050 PF01479 S4 domain D1095_10060 PF00924 Mechanosensitive ion channel D1095_10060 PF05552 Conserved TM helix D1095_10065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1095_10065 PF02785 Biotin carboxylase C-terminal domain D1095_10065 PF00289 Biotin carboxylase, N-terminal domain D1095_10075 PF16187 Middle or third domain of peptidase_M16 D1095_10075 PF05193 Peptidase M16 inactive domain D1095_10075 PF00675 Insulinase (Peptidase family M16) D1095_10080 PF17946 RecC C-terminal domain D1095_10105 PF07977 FabA-like domain D1095_10110 PF13654 AAA domain D1095_10110 PF05362 Lon protease (S16) C-terminal proteolytic domain D1095_10115 PF06303 MatP N-terminal domain D1095_10115 PF17414 MatP C-terminal ribbon-helix-helix domain D1095_10120 PF00579 tRNA synthetases class I (W and Y) D1095_10125 PF13419 Haloacid dehalogenase-like hydrolase D1095_10140 PF01790 Prolipoprotein diacylglyceryl transferase D1095_10145 PF01925 Sulfite exporter TauE/SafE D1095_10150 PF00293 NUDIX domain D1095_10160 PF00719 Inorganic pyrophosphatase D1095_10165 PF05175 Methyltransferase small domain D1095_10170 PF03737 Aldolase/RraA D1095_10175 PF01226 Formate/nitrite transporter D1095_10195 PF00226 DnaJ domain D1095_10195 PF01556 DnaJ C terminal domain D1095_10195 PF00684 DnaJ central domain D1095_10200 PF00012 Hsp70 protein D1095_10205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1095_10205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1095_10215 PF13407 Periplasmic binding protein domain D1095_10220 PF00005 ABC transporter D1095_10225 PF02653 Branched-chain amino acid transport system / permease component D1095_10230 PF12833 Helix-turn-helix domain D1095_10235 PF01431 Peptidase family M13 D1095_10235 PF05649 Peptidase family M13 D1095_10240 PF10571 Uncharacterised protein family UPF0547 D1095_10245 PF00474 Sodium:solute symporter family D1095_10250 PF06196 Protein of unknown function (DUF997) D1095_10255 PF01340 Met Apo-repressor, MetJ D1095_10260 PF04333 MlaA lipoprotein D1095_10265 PF01263 Aldose 1-epimerase D1095_10280 PF14883 Hypothetical glycosyl hydrolase family 13 D1095_10280 PF01522 Polysaccharide deacetylase D1095_10285 PF00535 Glycosyl transferase family 2 D1095_10295 PF00121 Triosephosphate isomerase D1095_10300 PF01142 tRNA pseudouridine synthase D (TruD) D1095_10305 PF01975 Survival protein SurE D1095_10310 PF09335 SNARE associated Golgi protein D1095_10325 PF01551 Peptidase family M23 D1095_10325 PF01476 LysM domain D1095_10330 PF03352 Methyladenine glycosylase D1095_10340 PF07670 Nucleoside recognition D1095_10345 PF07670 Nucleoside recognition D1095_10350 PF00762 Ferrochelatase D1095_10355 PF00468 Ribosomal protein L34 D1095_10360 PF00825 Ribonuclease P D1095_10365 PF01809 Putative membrane protein insertion efficiency factor D1095_10370 PF00120 Glutamine synthetase, catalytic domain D1095_10370 PF03951 Glutamine synthetase, beta-Grasp domain D1095_10375 PF00149 Calcineurin-like phosphoesterase D1095_10380 PF00293 NUDIX domain D1095_10385 PF06146 Phosphate-starvation-inducible E D1095_10390 PF01648 4'-phosphopantetheinyl transferase superfamily D1095_10395 PF00892 EamA-like transporter family D1095_10400 PF06965 Na+/H+ antiporter 1 D1095_10410 PF02580 D-Tyr-tRNA(Tyr) deacylase D1095_10415 PF03631 Virulence factor BrkB D1095_10420 PF00171 Aldehyde dehydrogenase family D1095_10440 PF08676 MutL C terminal dimerisation domain D1095_10440 PF01119 DNA mismatch repair protein, C-terminal domain D1095_10445 PF08240 Alcohol dehydrogenase GroES-like domain D1095_10445 PF00107 Zinc-binding dehydrogenase D1095_10455 PF17209 Hfq protein D1095_10460 PF16360 GTP-binding GTPase Middle Region D1095_10460 PF13167 GTP-binding GTPase N-terminal D1095_10460 PF01926 50S ribosome-binding GTPase D1095_10465 PF03641 Possible lysine decarboxylase D1095_10470 PF03819 MazG nucleotide pyrophosphohydrolase domain D1095_10475 PF00027 Cyclic nucleotide-binding domain D1095_10475 PF13545 Crp-like helix-turn-helix domain D1095_10480 PF06794 Uncharacterised protein family (UPF0270) D1095_10485 PF00440 Bacterial regulatory proteins, tetR family D1095_10490 PF00692 dUTPase D1095_10495 PF04127 DNA / pantothenate metabolism flavoprotein D1095_10495 PF02441 Flavoprotein D1095_10500 PF04002 RadC-like JAB domain D1095_10505 PF00830 Ribosomal L28 family D1095_10510 PF00471 Ribosomal protein L33 D1095_10525 PF00202 Aminotransferase class-III D1095_10530 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1095_10535 PF01206 Sulfurtransferase TusA D1095_10540 PF04143 Sulphur transport D1095_10545 PF04219 Protein of unknown function, DUF D1095_10550 PF05958 tRNA (Uracil-5-)-methyltransferase D1095_10565 PF01544 CorA-like Mg2+ transporter protein D1095_10570 PF01209 ubiE/COQ5 methyltransferase family D1095_10580 PF03109 ABC1 family D1095_10585 PF02416 mttA/Hcf106 family D1095_10595 PF00902 Sec-independent protein translocase protein (TatC) D1095_10600 PF00490 Delta-aminolevulinic acid dehydratase D1095_10610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1095_10610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1095_10610 PF06827 Zinc finger found in FPG and IleRS D1095_10615 PF05525 Branched-chain amino acid transport protein D1095_10625 PF00698 Acyl transferase domain D1095_10630 PF02677 Epoxyqueuosine reductase QueH D1095_10635 PF00348 Polyprenyl synthetase D1095_10645 PF03358 NADPH-dependent FMN reductase D1095_10650 PF07681 DoxX D1095_10655 PF00829 Ribosomal prokaryotic L21 protein D1095_10660 PF01016 Ribosomal L27 protein D1095_10665 PF00892 EamA-like transporter family D1095_10670 PF04575 Protein of unknown function (DUF560) D1095_10675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1095_10680 PF00156 Phosphoribosyl transferase domain D1095_10685 PF08468 Methyltransferase small domain N-terminal D1095_10685 PF05175 Methyltransferase small domain D1095_10695 PF00583 Acetyltransferase (GNAT) family D1095_10700 PF00271 Helicase conserved C-terminal domain D1095_10700 PF00270 DEAD/DEAH box helicase D1095_10705 PF01243 Pyridoxamine 5'-phosphate oxidase D1095_10705 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1095_10710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1095_10715 PF00171 Aldehyde dehydrogenase family D1095_10720 PF01184 GPR1/FUN34/yaaH family D1095_10725 PF00005 ABC transporter D1095_10730 PF01497 Periplasmic binding protein D1095_10735 PF01032 FecCD transport family D1095_10740 PF07715 TonB-dependent Receptor Plug Domain D1095_10740 PF00593 TonB dependent receptor D1095_10750 PF01259 SAICAR synthetase D1095_10755 PF08029 HisG, C-terminal domain D1095_10755 PF01634 ATP phosphoribosyltransferase D1095_10760 PF00815 Histidinol dehydrogenase D1095_10765 PF00155 Aminotransferase class I and II D1095_10775 PF00475 Imidazoleglycerol-phosphate dehydratase D1095_10795 PF00117 Glutamine amidotransferase class-I D1095_10800 PF00977 Histidine biosynthesis protein D1095_10805 PF00977 Histidine biosynthesis protein D1095_10815 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1095_10815 PF01502 Phosphoribosyl-AMP cyclohydrolase D1095_10820 PF02592 Putative vitamin uptake transporter D1095_10825 PF00557 Metallopeptidase family M24 D1095_10835 PF00356 Bacterial regulatory proteins, lacI family D1095_10835 PF13407 Periplasmic binding protein domain D1095_10840 PF08244 Glycosyl hydrolases family 32 C terminal D1095_10840 PF00251 Glycosyl hydrolases family 32 N-terminal domain D1095_10845 PF00294 pfkB family carbohydrate kinase D1095_10850 PF07732 Multicopper oxidase D1095_10855 PF02687 FtsX-like permease family D1095_10855 PF12704 MacB-like periplasmic core domain D1095_10860 PF00005 ABC transporter D1095_10865 PF12704 MacB-like periplasmic core domain D1095_10865 PF02687 FtsX-like permease family D1095_10870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1095_10870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1095_10875 PF00793 DAHP synthetase I family D1095_10880 PF13369 Transglutaminase-like superfamily D1095_10885 PF13847 Methyltransferase domain D1095_10885 PF17827 PrmC N-terminal domain D1095_10895 PF03462 PCRF domain D1095_10895 PF00472 RF-1 domain