APJL_0001 SM00382 ATPases associated with a variety of cellular activities APJL_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain APJL_0002 SM00480 DNA polymerase III beta subunit APJL_0005 SM00859 Semialdehyde dehydrogenase, NAD binding domain APJL_0023 SM00842 Cell division protein FtsA APJL_0024 SM00864 Tubulin/FtsZ family, GTPase domain APJL_0024 SM00865 Tubulin/FtsZ family, C-terminal domain APJL_0027 SM00382 ATPases associated with a variety of cellular activities APJL_0040 SM00836 DALR anticodon binding domain APJL_0040 SM01016 Arginyl tRNA synthetase N terminal dom APJL_0043 SM00967 RNA 2'-O ribose methyltransferase substrate binding APJL_0044 SM00155 Phospholipase D. Active site motifs. APJL_0046 SM00904 Riboflavin kinase APJL_0047 SM00530 Helix-turn-helix XRE-family like proteins APJL_0049 SM00448 cheY-homologous receiver domain APJL_0049 SM00862 Transcriptional regulatory protein, C terminal APJL_0059 SM00421 helix_turn_helix, Lux Regulon APJL_0059 SM00448 cheY-homologous receiver domain APJL_0060 SM00981 APJL_0060 APJL_0067 SM00382 ATPases associated with a variety of cellular activities APJL_0068 SM00382 ATPases associated with a variety of cellular activities APJL_0074 SM00493 APJL_0074 APJL_0079 SM00450 Rhodanese Homology Domain APJL_0082 SM01120 APJL_0082 APJL_0109 SM00346 helix_turn_helix isocitrate lyase regulation APJL_0115 SM00411 bacterial (prokaryotic) histone like domain APJL_0118 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_0118 SM00876 Biotin and Thiamin Synthesis associated domain APJL_0119 SM00357 Cold shock protein domain APJL_0120 SM00945 ProQ/FINO family APJL_0121 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APJL_0121 SM00245 tail specific protease APJL_0124 SM00849 Metallo-beta-lactamase superfamily APJL_0136 SM00870 APJL_0136 APJL_0153 SM00900 APJL_0153 APJL_0171 SM00900 APJL_0171 APJL_0183 SM00479 APJL_0183 APJL_0185 SM00830 Chorismate mutase type II APJL_0189 SM00855 Phosphoglycerate mutase family APJL_0206 SM00967 RNA 2'-O ribose methyltransferase substrate binding APJL_0208 SM00861 Transketolase, pyrimidine binding domain APJL_0220 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APJL_0233 SM01091 Transporter associated domain APJL_0235 SM00855 Phosphoglycerate mutase family APJL_0236 SM00732 Likely ribonuclease with RNase H fold. APJL_0244 SM00957 SecA DEAD-like domain APJL_0244 SM00958 SecA preprotein cross-linking domain APJL_0247 SM00859 Semialdehyde dehydrogenase, NAD binding domain APJL_0253 SM00357 Cold shock protein domain APJL_0253 SM00382 ATPases associated with a variety of cellular activities APJL_0253 SM00959 Rho termination factor, N-terminal domain APJL_0260 SM01005 Alanine racemase, C-terminal domain APJL_0264 SM00072 Guanylate kinase homologues. APJL_0268 SM00382 ATPases associated with a variety of cellular activities APJL_0272 SM00382 ATPases associated with a variety of cellular activities APJL_0273 SM00382 ATPases associated with a variety of cellular activities APJL_0280 SM00382 ATPases associated with a variety of cellular activities APJL_0287 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APJL_0287 SM00465 GIY-YIG type nucleases (URI domain) APJL_0290 SM00382 ATPases associated with a variety of cellular activities APJL_0295 SM00382 ATPases associated with a variety of cellular activities APJL_0297 SM00434 DNA Topoisomerase IV APJL_0304 SM00487 DEAD-like helicases superfamily APJL_0305 SM00382 ATPases associated with a variety of cellular activities APJL_0319 SM00271 DnaJ molecular chaperone homology domain APJL_0322 SM00382 ATPases associated with a variety of cellular activities APJL_0328 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APJL_0329 SM00487 DEAD-like helicases superfamily APJL_0329 SM00490 helicase superfamily c-terminal domain APJL_0331 SM00644 APJL_0331 APJL_0338 SM00345 helix_turn_helix gluconate operon transcriptional repressor APJL_0341 SM00937 APJL_0341 APJL_0352 SM00382 ATPases associated with a variety of cellular activities APJL_0362 SM00642 Alpha-amylase domain APJL_0363 SM00642 Alpha-amylase domain APJL_0367 SM00562 APJL_0367 APJL_0369 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APJL_0371 SM00363 S4 RNA-binding domain APJL_0375 SM00518 AP endonuclease family 2 APJL_0380 SM00986 Uracil DNA glycosylase superfamily APJL_0380 SM00987 UreE urease accessory protein, C-terminal domain APJL_0382 SM00869 Autotransporter beta-domain APJL_0383 SM00382 ATPases associated with a variety of cellular activities APJL_0383 SM00487 DEAD-like helicases superfamily APJL_0383 SM00490 helicase superfamily c-terminal domain APJL_0383 SM00847 Helicase associated domain (HA2) Add an annotation APJL_0390 SM00116 Domain in cystathionine beta-synthase and other proteins. APJL_0390 SM01091 Transporter associated domain APJL_0394 SM00382 ATPases associated with a variety of cellular activities APJL_0394 SM00464 Found in ATP-dependent protease La (LON) APJL_0408 SM00116 Domain in cystathionine beta-synthase and other proteins. APJL_0414 SM00917 LeuA allosteric (dimerisation) domain APJL_0420 SM00650 Ribosomal RNA adenine dimethylases APJL_0424 SM00382 ATPases associated with a variety of cellular activities APJL_0434 SM00935 Outer membrane protein (OmpH-like) APJL_0436 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APJL_0439 SM00849 Metallo-beta-lactamase superfamily APJL_0441 SM00014 Acid phosphatase homologues APJL_0442 SM01103 APJL_0442 APJL_0452 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APJL_0458 SM01329 APJL_0458 APJL_0460 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APJL_0464 SM00382 ATPases associated with a variety of cellular activities APJL_0475 SM00528 Domain in histone-like proteins of HNS family APJL_0478 SM00881 CoA binding domain APJL_0482 SM00861 Transketolase, pyrimidine binding domain APJL_0483 SM00382 ATPases associated with a variety of cellular activities APJL_0489 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APJL_0489 SM00387 Histidine kinase-like ATPases APJL_0500 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APJL_0500 SM00474 3'-5' exonuclease APJL_0500 SM00475 5'-3' exonuclease APJL_0500 SM00482 DNA polymerase A domain APJL_0511 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APJL_0527 SM00876 Biotin and Thiamin Synthesis associated domain APJL_0536 SM00358 Double-stranded RNA binding motif APJL_0536 SM00535 Ribonuclease III family APJL_0551 SM00382 ATPases associated with a variety of cellular activities APJL_0564 SM00345 helix_turn_helix gluconate operon transcriptional repressor APJL_0568 SM00487 DEAD-like helicases superfamily APJL_0568 SM00490 helicase superfamily c-terminal domain APJL_0569 SM00028 Tetratricopeptide repeats APJL_0570 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_0570 SM00322 K homology RNA-binding domain APJL_0571 SM00434 DNA Topoisomerase IV APJL_0587 SM00116 Domain in cystathionine beta-synthase and other proteins. APJL_0587 SM01240 APJL_0587 APJL_0589 SM00382 ATPases associated with a variety of cellular activities APJL_0592 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APJL_0603 SM00873 B3/4 domain APJL_0603 SM00874 tRNA synthetase B5 domain APJL_0603 SM00896 Ferredoxin-fold anticodon binding domain APJL_0604 SM00411 bacterial (prokaryotic) histone like domain APJL_0611 SM00341 Helicase and RNase D C-terminal APJL_0611 SM00474 3'-5' exonuclease APJL_0612 SM00344 helix_turn_helix ASNC type APJL_0613 SM00843 APJL_0613 APJL_0621 SM00382 ATPases associated with a variety of cellular activities APJL_0622 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APJL_0622 SM00387 Histidine kinase-like ATPases APJL_0622 SM00388 His Kinase A (phosphoacceptor) domain APJL_0623 SM00448 cheY-homologous receiver domain APJL_0623 SM00862 Transcriptional regulatory protein, C terminal APJL_0629 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_0644 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APJL_0646 SM00100 Cyclic nucleotide-monophosphate binding domain APJL_0646 SM00419 helix_turn_helix, cAMP Regulatory protein APJL_0649 SM01001 AIR carboxylase APJL_0650 SM00870 APJL_0650 APJL_0653 SM01011 Aminopeptidase P, N-terminal domain APJL_0657 SM00487 DEAD-like helicases superfamily APJL_0657 SM00490 helicase superfamily c-terminal domain APJL_0662 SM00487 DEAD-like helicases superfamily APJL_0662 SM00490 helicase superfamily c-terminal domain APJL_0666 SM00481 DNA polymerase alpha chain like domain APJL_0673 SM00841 Elongation factor P, C-terminal APJL_0673 SM01185 APJL_0673 APJL_0688 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_0694 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APJL_0694 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APJL_0694 SM00493 APJL_0694 APJL_0717 SM00382 ATPases associated with a variety of cellular activities APJL_0720 SM00287 Bacterial SH3 domain homologues APJL_0726 SM00357 Cold shock protein domain APJL_0738 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APJL_0739 SM00028 Tetratricopeptide repeats APJL_0741 SM00411 bacterial (prokaryotic) histone like domain APJL_0742 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_0746 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APJL_0746 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APJL_0746 SM00493 APJL_0746 APJL_0747 SM00098 Alkaline phosphatase homologues APJL_0759 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_0759 SM00357 Cold shock protein domain APJL_0759 SM00955 APJL_0759 APJL_0778 SM01400 APJL_0778 APJL_0781 SM00382 ATPases associated with a variety of cellular activities APJL_0784 SM00491 APJL_0784 APJL_0799 SM00382 ATPases associated with a variety of cellular activities APJL_0803 SM00382 ATPases associated with a variety of cellular activities APJL_0816 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_0822 SM00925 MltA specific insert domain APJL_0825 SM00095 Transthyretin APJL_0826 SM00354 helix_turn _helix lactose operon repressor APJL_0828 SM00387 Histidine kinase-like ATPases APJL_0828 SM00433 TopoisomeraseII APJL_0830 SM00420 helix_turn_helix, Deoxyribose operon repressor APJL_0830 SM01134 APJL_0830 APJL_0833 SM00382 ATPases associated with a variety of cellular activities APJL_0834 SM00382 ATPases associated with a variety of cellular activities APJL_0840 SM00855 Phosphoglycerate mutase family APJL_0846 SM00382 ATPases associated with a variety of cellular activities APJL_0850 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APJL_0850 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APJL_0858 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_0861 SM00382 ATPases associated with a variety of cellular activities APJL_0862 SM00382 ATPases associated with a variety of cellular activities APJL_0876 SM01118 APJL_0876 APJL_0893 SM00382 ATPases associated with a variety of cellular activities APJL_0896 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APJL_0898 SM00478 endonuclease III APJL_0904 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APJL_0911 SM01130 APJL_0911 APJL_0924 SM00382 ATPases associated with a variety of cellular activities APJL_0924 SM00930 APJL_0924 APJL_0925 SM00840 APJL_0925 APJL_0938 SM00271 DnaJ molecular chaperone homology domain APJL_0945 SM00387 Histidine kinase-like ATPases APJL_0945 SM00388 His Kinase A (phosphoacceptor) domain APJL_0945 SM00448 cheY-homologous receiver domain APJL_0947 SM00463 Small MutS-related domain APJL_0957 SM01126 APJL_0957 APJL_0960 SM00901 APJL_0960 APJL_0962 SM00530 Helix-turn-helix XRE-family like proteins APJL_0963 SM01126 APJL_0963 APJL_0969 SM00382 ATPases associated with a variety of cellular activities APJL_0971 SM00798 AICARFT/IMPCHase bienzyme APJL_0971 SM00851 MGS-like domain APJL_0979 SM00912 haemagglutination activity domain APJL_0982 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_1003 SM00861 Transketolase, pyrimidine binding domain APJL_1004 SM00387 Histidine kinase-like ATPases APJL_1005 SM01060 APJL_1005 APJL_1014 SM01038 Beta galactosidase small chain APJL_1023 SM01387 APJL_1023 APJL_1031 SM00883 Chaperonin 10 Kd subunit APJL_1033 SM01133 APJL_1033 APJL_1040 SM00345 helix_turn_helix gluconate operon transcriptional repressor APJL_1050 SM00487 DEAD-like helicases superfamily APJL_1050 SM00490 helicase superfamily c-terminal domain APJL_1051 SM00830 Chorismate mutase type II APJL_1067 SM00028 Tetratricopeptide repeats APJL_1073 SM00825 Beta-ketoacyl synthase APJL_1079 SM00448 cheY-homologous receiver domain APJL_1079 SM00862 Transcriptional regulatory protein, C terminal APJL_1080 SM00387 Histidine kinase-like ATPases APJL_1080 SM00388 His Kinase A (phosphoacceptor) domain APJL_1082 SM01323 APJL_1082 APJL_1090 SM00981 APJL_1090 APJL_1091 SM00788 Adenylosuccinate synthetase APJL_1092 SM00244 prohibitin homologues APJL_1093 SM00244 prohibitin homologues APJL_1103 SM00382 ATPases associated with a variety of cellular activities APJL_1103 SM01086 C-terminal, D2-small domain, of ClpB protein APJL_1106 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APJL_1120 SM00481 DNA polymerase alpha chain like domain APJL_1123 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. APJL_1126 SM00563 Phosphate acyltransferases APJL_1128 SM00927 DNA mismatch repair enzyme MutH APJL_1132 SM01192 APJL_1132 APJL_1132 SM01193 APJL_1132 APJL_1135 SM00341 Helicase and RNase D C-terminal APJL_1135 SM00487 DEAD-like helicases superfamily APJL_1135 SM00490 helicase superfamily c-terminal domain APJL_1135 SM00956 APJL_1135 APJL_1136 SM01219 APJL_1136 APJL_1141 SM00363 S4 RNA-binding domain APJL_1145 SM00318 Staphylococcal nuclease homologues APJL_1153 SM00479 APJL_1153 APJL_1155 SM00257 Lysin motif APJL_1155 SM00646 APJL_1155 APJL_1161 SM01022 APJL_1161 APJL_1163 SM00382 ATPases associated with a variety of cellular activities APJL_1179 SM00363 S4 RNA-binding domain APJL_1193 SM01209 APJL_1193 APJL_1193 SM01210 APJL_1193 APJL_1209 SM00342 helix_turn_helix, arabinose operon control protein APJL_1221 SM00829 Enoylreductase APJL_1227 SM00903 Flavin reductase like domain APJL_1228 SM00382 ATPases associated with a variety of cellular activities APJL_1239 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_1245 SM00421 helix_turn_helix, Lux Regulon APJL_1248 SM00382 ATPases associated with a variety of cellular activities APJL_1260 SM00382 ATPases associated with a variety of cellular activities APJL_1266 SM00387 Histidine kinase-like ATPases APJL_1266 SM00433 TopoisomeraseII APJL_1267 SM00091 PAS domain APJL_1267 SM00387 Histidine kinase-like ATPases APJL_1267 SM00388 His Kinase A (phosphoacceptor) domain APJL_1268 SM00448 cheY-homologous receiver domain APJL_1268 SM00862 Transcriptional regulatory protein, C terminal APJL_1269 SM00382 ATPases associated with a variety of cellular activities APJL_1273 SM00422 helix_turn_helix, mercury resistance APJL_1281 SM00731 SprT homologues. APJL_1283 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_1283 SM00732 Likely ribonuclease with RNase H fold. APJL_1284 SM00028 Tetratricopeptide repeats APJL_1291 SM00382 ATPases associated with a variety of cellular activities APJL_1291 SM01086 C-terminal, D2-small domain, of ClpB protein APJL_1294 SM00479 APJL_1294 APJL_1295 SM00382 ATPases associated with a variety of cellular activities APJL_1297 SM00450 Rhodanese Homology Domain APJL_1305 SM00382 ATPases associated with a variety of cellular activities APJL_1306 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APJL_1315 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APJL_1315 SM00292 breast cancer carboxy-terminal domain APJL_1315 SM00532 Ligase N family APJL_1316 SM00771 ZipA, C-terminal domain (FtsZ-binding) APJL_1319 SM01350 APJL_1319 APJL_1327 SM00363 S4 RNA-binding domain APJL_1334 SM00382 ATPases associated with a variety of cellular activities APJL_1339 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_1345 SM00382 ATPases associated with a variety of cellular activities APJL_1357 SM00487 DEAD-like helicases superfamily APJL_1357 SM00490 helicase superfamily c-terminal domain APJL_1357 SM00982 APJL_1357 APJL_1357 SM01058 CarD-like/TRCF domain APJL_1359 SM01207 APJL_1359 APJL_1360 SM00905 Dihydroneopterin aldolase APJL_1363 SM00382 ATPases associated with a variety of cellular activities APJL_1364 SM00382 ATPases associated with a variety of cellular activities APJL_1364 SM00962 SRP54-type protein, GTPase domain APJL_1364 SM00963 SRP54-type protein, helical bundle domain APJL_1367 SM00903 Flavin reductase like domain APJL_1371 SM00062 Bacterial periplasmic substrate-binding proteins APJL_1372 SM00382 ATPases associated with a variety of cellular activities APJL_1375 SM00530 Helix-turn-helix XRE-family like proteins APJL_1383 SM00749 bacterial OsmY and nodulation domain APJL_1384 SM00062 Bacterial periplasmic substrate-binding proteins APJL_1390 SM00382 ATPases associated with a variety of cellular activities APJL_1397 SM01235 APJL_1397 APJL_1398 SM01152 APJL_1398 APJL_1407 SM01091 Transporter associated domain APJL_1418 SM00382 ATPases associated with a variety of cellular activities APJL_1433 SM00487 DEAD-like helicases superfamily APJL_1440 SM00422 helix_turn_helix, mercury resistance APJL_1451 SM00382 ATPases associated with a variety of cellular activities APJL_1461 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APJL_1468 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_1499 SM00400 zinc finger APJL_1499 SM00493 APJL_1499 APJL_1499 SM00766 DNA primase DnaG DnaB-binding APJL_1501 SM00363 S4 RNA-binding domain APJL_1503 SM00316 Ribosomal protein S1-like RNA-binding domain APJL_1503 SM00357 Cold shock protein domain APJL_1503 SM00955 APJL_1503 APJL_1513 SM00563 Phosphate acyltransferases APJL_1520 SM00530 Helix-turn-helix XRE-family like proteins APJL_1523 SM00851 MGS-like domain APJL_1532 SM00257 Lysin motif APJL_1534 SM00450 Rhodanese Homology Domain APJL_1537 SM00971 Serine acetyltransferase, N-terminal APJL_1543 SM00852 Probable molybdopterin binding domain APJL_1544 SM00938 Nitrogen regulatory protein P-II APJL_1549 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_1579 SM00984 UDP binding domain APJL_1611 SM00028 Tetratricopeptide repeats APJL_1618 SM00382 ATPases associated with a variety of cellular activities APJL_1619 SM00382 ATPases associated with a variety of cellular activities APJL_1626 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_1629 SM00936 Penicillin-binding protein 5, C-terminal domain APJL_1635 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APJL_1635 SM00534 ATPase domain of DNA mismatch repair MUTS family APJL_1636 SM00382 ATPases associated with a variety of cellular activities APJL_1647 SM00988 UreE urease accessory protein, N-terminal domain APJL_1653 SM00382 ATPases associated with a variety of cellular activities APJL_1665 SM00420 helix_turn_helix, Deoxyribose operon repressor APJL_1665 SM01134 APJL_1665 APJL_1669 SM00729 Elongator protein 3, MiaB family, Radical SAM APJL_1679 SM00382 ATPases associated with a variety of cellular activities APJL_1688 SM01228 APJL_1688 APJL_1690 SM00062 Bacterial periplasmic substrate-binding proteins APJL_1698 SM00354 helix_turn _helix lactose operon repressor APJL_1699 SM00354 helix_turn _helix lactose operon repressor APJL_1701 SM00382 ATPases associated with a variety of cellular activities APJL_1705 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APJL_1714 SM01211 APJL_1714 APJL_1715 SM00420 helix_turn_helix, Deoxyribose operon repressor APJL_1715 SM01134 APJL_1715 APJL_1719 SM01007 Class II Aldolase and Adducin N-terminal domain APJL_1725 SM00382 ATPases associated with a variety of cellular activities APJL_1726 SM00062 Bacterial periplasmic substrate-binding proteins APJL_1730 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APJL_1734 SM00420 helix_turn_helix, Deoxyribose operon repressor APJL_1734 SM01134 APJL_1734 APJL_1736 SM01007 Class II Aldolase and Adducin N-terminal domain APJL_1739 SM00530 Helix-turn-helix XRE-family like proteins APJL_1750 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APJL_1750 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APJL_1751 SM00649 Ribosomal protein L11/L12 APJL_1763 SM00663 RNA polymerase I subunit A N-terminus APJL_1767 SM00670 Large family of predicted nucleotide-binding domains APJL_1771 SM00382 ATPases associated with a variety of cellular activities APJL_1771 SM01086 C-terminal, D2-small domain, of ClpB protein APJL_1775 SM00478 endonuclease III APJL_1775 SM00525 APJL_1775 APJL_1778 SM00382 ATPases associated with a variety of cellular activities APJL_1778 SM00962 SRP54-type protein, GTPase domain APJL_1778 SM00963 SRP54-type protein, helical bundle domain APJL_1782 SM00382 ATPases associated with a variety of cellular activities APJL_1789 SM01130 APJL_1789 APJL_1794 SM01403 APJL_1794 APJL_1798 SM01382 APJL_1798 APJL_1798 SM01383 APJL_1798 APJL_1801 SM00322 K homology RNA-binding domain APJL_1805 SM01374 APJL_1805 APJL_1806 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APJL_1819 SM00363 S4 RNA-binding domain APJL_1819 SM01390 APJL_1819 APJL_1820 SM00662 RNA polymerases D APJL_1826 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. APJL_1829 SM00382 ATPases associated with a variety of cellular activities APJL_1839 SM00836 DALR anticodon binding domain APJL_1849 SM00382 ATPases associated with a variety of cellular activities APJL_1855 SM00823 Phosphopantetheine attachment site APJL_1861 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APJL_1861 SM00954 Region found in RelA / SpoT proteins APJL_1862 SM01409 APJL_1862 APJL_1863 SM00487 DEAD-like helicases superfamily APJL_1863 SM00490 helicase superfamily c-terminal domain APJL_1877 SM00344 helix_turn_helix ASNC type APJL_1890 SM00382 ATPases associated with a variety of cellular activities APJL_1899 SM00460 Transglutaminase/protease-like homologues APJL_1908 SM00878 Biotin carboxylase C-terminal domain APJL_1921 SM00363 S4 RNA-binding domain APJL_1952 SM00271 DnaJ molecular chaperone homology domain APJL_1957 SM00382 ATPases associated with a variety of cellular activities APJL_1959 SM00342 helix_turn_helix, arabinose operon control protein APJL_1976 SM00257 Lysin motif APJL_1978 SM00257 Lysin motif APJL_1986 SM01234 APJL_1986 APJL_1987 SM01230 APJL_1987 APJL_1995 SM00458 Ricin-type beta-trefoil APJL_2005 SM00853 MutL C terminal dimerisation domain APJL_2005 SM01340 APJL_2005 APJL_2006 SM00829 Enoylreductase APJL_2012 SM00100 Cyclic nucleotide-monophosphate binding domain APJL_2012 SM00419 helix_turn_helix, cAMP Regulatory protein APJL_2036 SM01004 Delta-aminolevulinic acid dehydratase APJL_2038 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APJL_2038 SM01232 APJL_2038 APJL_2040 SM00822 APJL_2040 APJL_2041 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APJL_2058 SM00487 DEAD-like helicases superfamily APJL_2058 SM00490 helicase superfamily c-terminal domain APJL_2063 SM00382 ATPases associated with a variety of cellular activities APJL_2083 SM00354 helix_turn _helix lactose operon repressor APJL_2084 SM00640 Glycosyl hydrolases family 32 APJL_2088 SM00382 ATPases associated with a variety of cellular activities APJL_2095 SM00937 APJL_2095 APJL_2096 SM00450 Rhodanese Homology Domain