APL_0001 SM00382 ATPases associated with a variety of cellular activities APL_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain APL_0002 SM00480 DNA polymerase III beta subunit APL_0005 SM00859 Semialdehyde dehydrogenase, NAD binding domain APL_0022 SM00842 Cell division protein FtsA APL_0023 SM00864 Tubulin/FtsZ family, GTPase domain APL_0023 SM00865 Tubulin/FtsZ family, C-terminal domain APL_0026 SM00382 ATPases associated with a variety of cellular activities APL_0039 SM00836 DALR anticodon binding domain APL_0039 SM01016 Arginyl tRNA synthetase N terminal dom APL_0042 SM00967 RNA 2'-O ribose methyltransferase substrate binding APL_0043 SM00155 Phospholipase D. Active site motifs. APL_0045 SM00904 Riboflavin kinase APL_0046 SM00530 Helix-turn-helix XRE-family like proteins APL_0048 SM00448 cheY-homologous receiver domain APL_0048 SM00862 Transcriptional regulatory protein, C terminal APL_0059 SM00421 helix_turn_helix, Lux Regulon APL_0059 SM00448 cheY-homologous receiver domain APL_0060 SM00981 APL_0060 APL_0067 SM00382 ATPases associated with a variety of cellular activities APL_0068 SM00382 ATPases associated with a variety of cellular activities APL_0074 SM00493 APL_0074 APL_0079 SM00450 Rhodanese Homology Domain APL_0082 SM01120 APL_0082 APL_0108 SM00346 helix_turn_helix isocitrate lyase regulation APL_0114 SM00411 bacterial (prokaryotic) histone like domain APL_0117 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_0117 SM00876 Biotin and Thiamin Synthesis associated domain APL_0118 SM00357 Cold shock protein domain APL_0119 SM00945 ProQ/FINO family APL_0120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APL_0120 SM00245 tail specific protease APL_0123 SM00849 Metallo-beta-lactamase superfamily APL_0135 SM00870 APL_0135 APL_0152 SM00900 APL_0152 APL_0170 SM00900 APL_0170 APL_0182 SM00479 APL_0182 APL_0184 SM00830 Chorismate mutase type II APL_0188 SM00855 Phosphoglycerate mutase family APL_0205 SM00967 RNA 2'-O ribose methyltransferase substrate binding APL_0207 SM00861 Transketolase, pyrimidine binding domain APL_0219 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APL_0228 SM01091 Transporter associated domain APL_0230 SM00855 Phosphoglycerate mutase family APL_0231 SM00732 Likely ribonuclease with RNase H fold. APL_0239 SM00957 SecA DEAD-like domain APL_0239 SM00958 SecA preprotein cross-linking domain APL_0242 SM00859 Semialdehyde dehydrogenase, NAD binding domain APL_0247 SM00357 Cold shock protein domain APL_0247 SM00382 ATPases associated with a variety of cellular activities APL_0247 SM00959 Rho termination factor, N-terminal domain APL_0252 SM01005 Alanine racemase, C-terminal domain APL_0256 SM00072 Guanylate kinase homologues. APL_0260 SM00382 ATPases associated with a variety of cellular activities APL_0264 SM00382 ATPases associated with a variety of cellular activities APL_0265 SM00382 ATPases associated with a variety of cellular activities APL_0271 SM00382 ATPases associated with a variety of cellular activities APL_0277 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APL_0277 SM00465 GIY-YIG type nucleases (URI domain) APL_0280 SM00382 ATPases associated with a variety of cellular activities APL_0283 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APL_0284 SM00382 ATPases associated with a variety of cellular activities APL_0286 SM00434 DNA Topoisomerase IV APL_0289 SM01040 BRO family, N-terminal domain APL_0293 SM00487 DEAD-like helicases superfamily APL_0294 SM00382 ATPases associated with a variety of cellular activities APL_0306 SM00271 DnaJ molecular chaperone homology domain APL_0309 SM00382 ATPases associated with a variety of cellular activities APL_0310 SM00852 Probable molybdopterin binding domain APL_0313 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APL_0314 SM00487 DEAD-like helicases superfamily APL_0314 SM00490 helicase superfamily c-terminal domain APL_0316 SM00644 APL_0316 APL_0323 SM00345 helix_turn_helix gluconate operon transcriptional repressor APL_0326 SM00937 APL_0326 APL_0336 SM00382 ATPases associated with a variety of cellular activities APL_0346 SM00642 Alpha-amylase domain APL_0347 SM00642 Alpha-amylase domain APL_0351 SM00562 APL_0351 APL_0353 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APL_0354 SM00363 S4 RNA-binding domain APL_0358 SM00518 AP endonuclease family 2 APL_0362 SM00986 Uracil DNA glycosylase superfamily APL_0362 SM00987 UreE urease accessory protein, C-terminal domain APL_0364 SM00869 Autotransporter beta-domain APL_0365 SM00382 ATPases associated with a variety of cellular activities APL_0365 SM00487 DEAD-like helicases superfamily APL_0365 SM00490 helicase superfamily c-terminal domain APL_0365 SM00847 Helicase associated domain (HA2) Add an annotation APL_0372 SM00116 Domain in cystathionine beta-synthase and other proteins. APL_0372 SM01091 Transporter associated domain APL_0376 SM00382 ATPases associated with a variety of cellular activities APL_0376 SM00464 Found in ATP-dependent protease La (LON) APL_0387 SM00116 Domain in cystathionine beta-synthase and other proteins. APL_0393 SM00917 LeuA allosteric (dimerisation) domain APL_0399 SM00650 Ribosomal RNA adenine dimethylases APL_0403 SM00382 ATPases associated with a variety of cellular activities APL_0405 SM00954 Region found in RelA / SpoT proteins APL_0410 SM00935 Outer membrane protein (OmpH-like) APL_0412 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APL_0415 SM00849 Metallo-beta-lactamase superfamily APL_0417 SM00014 Acid phosphatase homologues APL_0418 SM01103 APL_0418 APL_0427 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APL_0432 SM01329 APL_0432 APL_0434 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APL_0438 SM00382 ATPases associated with a variety of cellular activities APL_0448 SM00528 Domain in histone-like proteins of HNS family APL_0451 SM00881 CoA binding domain APL_0455 SM00861 Transketolase, pyrimidine binding domain APL_0456 SM00382 ATPases associated with a variety of cellular activities APL_0462 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APL_0462 SM00387 Histidine kinase-like ATPases APL_0473 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APL_0473 SM00474 3'-5' exonuclease APL_0473 SM00475 5'-3' exonuclease APL_0473 SM00482 DNA polymerase A domain APL_0482 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APL_0486 SM00919 Malic enzyme, NAD binding domain APL_0486 SM01274 APL_0486 APL_0536 SM00876 Biotin and Thiamin Synthesis associated domain APL_0543 SM00358 Double-stranded RNA binding motif APL_0543 SM00535 Ribonuclease III family APL_0560 SM00487 DEAD-like helicases superfamily APL_0560 SM00490 helicase superfamily c-terminal domain APL_0562 SM00382 ATPases associated with a variety of cellular activities APL_0565 SM00382 ATPases associated with a variety of cellular activities APL_0571 SM00345 helix_turn_helix gluconate operon transcriptional repressor APL_0575 SM00487 DEAD-like helicases superfamily APL_0575 SM00490 helicase superfamily c-terminal domain APL_0576 SM00028 Tetratricopeptide repeats APL_0577 SM00316 Ribosomal protein S1-like RNA-binding domain APL_0577 SM00322 K homology RNA-binding domain APL_0578 SM00434 DNA Topoisomerase IV APL_0593 SM00116 Domain in cystathionine beta-synthase and other proteins. APL_0593 SM01240 APL_0593 APL_0595 SM00382 ATPases associated with a variety of cellular activities APL_0598 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APL_0609 SM00873 B3/4 domain APL_0609 SM00874 tRNA synthetase B5 domain APL_0609 SM00896 Ferredoxin-fold anticodon binding domain APL_0610 SM00411 bacterial (prokaryotic) histone like domain APL_0616 SM00474 3'-5' exonuclease APL_0617 SM00344 helix_turn_helix ASNC type APL_0618 SM00843 APL_0618 APL_0626 SM00382 ATPases associated with a variety of cellular activities APL_0627 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APL_0627 SM00387 Histidine kinase-like ATPases APL_0627 SM00388 His Kinase A (phosphoacceptor) domain APL_0629 SM00448 cheY-homologous receiver domain APL_0629 SM00862 Transcriptional regulatory protein, C terminal APL_0636 SM00487 DEAD-like helicases superfamily APL_0638 SM00316 Ribosomal protein S1-like RNA-binding domain APL_0654 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APL_0656 SM00100 Cyclic nucleotide-monophosphate binding domain APL_0656 SM00419 helix_turn_helix, cAMP Regulatory protein APL_0659 SM01001 AIR carboxylase APL_0660 SM00870 APL_0660 APL_0663 SM01011 Aminopeptidase P, N-terminal domain APL_0667 SM00487 DEAD-like helicases superfamily APL_0667 SM00490 helicase superfamily c-terminal domain APL_0671 SM00481 DNA polymerase alpha chain like domain APL_0673 SM00479 APL_0673 APL_0678 SM00841 Elongation factor P, C-terminal APL_0678 SM01185 APL_0678 APL_0690 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_0696 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APL_0696 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APL_0696 SM00493 APL_0696 APL_0703 SM00487 DEAD-like helicases superfamily APL_0703 SM00490 helicase superfamily c-terminal domain APL_0717 SM00382 ATPases associated with a variety of cellular activities APL_0720 SM00287 Bacterial SH3 domain homologues APL_0725 SM00357 Cold shock protein domain APL_0726 SM00947 Carbonic anhydrase APL_0736 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APL_0737 SM00028 Tetratricopeptide repeats APL_0739 SM00411 bacterial (prokaryotic) histone like domain APL_0740 SM00316 Ribosomal protein S1-like RNA-binding domain APL_0742 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APL_0744 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APL_0744 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APL_0744 SM00493 APL_0744 APL_0757 SM00316 Ribosomal protein S1-like RNA-binding domain APL_0757 SM00357 Cold shock protein domain APL_0757 SM00955 APL_0757 APL_0766 SM00849 Metallo-beta-lactamase superfamily APL_0775 SM01400 APL_0775 APL_0778 SM00382 ATPases associated with a variety of cellular activities APL_0781 SM00491 APL_0781 APL_0793 SM00382 ATPases associated with a variety of cellular activities APL_0797 SM00382 ATPases associated with a variety of cellular activities APL_0810 SM00316 Ribosomal protein S1-like RNA-binding domain APL_0816 SM00925 MltA specific insert domain APL_0818 SM00095 Transthyretin APL_0819 SM00354 helix_turn _helix lactose operon repressor APL_0821 SM00387 Histidine kinase-like ATPases APL_0821 SM00433 TopoisomeraseII APL_0823 SM00420 helix_turn_helix, Deoxyribose operon repressor APL_0823 SM01134 APL_0823 APL_0826 SM00382 ATPases associated with a variety of cellular activities APL_0827 SM00382 ATPases associated with a variety of cellular activities APL_0832 SM00855 Phosphoglycerate mutase family APL_0838 SM00382 ATPases associated with a variety of cellular activities APL_0842 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APL_0842 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APL_0847 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_0850 SM00382 ATPases associated with a variety of cellular activities APL_0851 SM00382 ATPases associated with a variety of cellular activities APL_0865 SM01118 APL_0865 APL_0881 SM00382 ATPases associated with a variety of cellular activities APL_0884 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APL_0886 SM00478 endonuclease III APL_0886 SM00525 APL_0886 APL_0892 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APL_0899 SM01130 APL_0899 APL_0912 SM00382 ATPases associated with a variety of cellular activities APL_0912 SM00930 APL_0912 APL_0913 SM00840 APL_0913 APL_0928 SM00271 DnaJ molecular chaperone homology domain APL_0935 SM00387 Histidine kinase-like ATPases APL_0935 SM00388 His Kinase A (phosphoacceptor) domain APL_0935 SM00448 cheY-homologous receiver domain APL_0937 SM00463 Small MutS-related domain APL_0947 SM01126 APL_0947 APL_0951 SM00530 Helix-turn-helix XRE-family like proteins APL_0952 SM01126 APL_0952 APL_0958 SM00798 AICARFT/IMPCHase bienzyme APL_0958 SM00851 MGS-like domain APL_0959 SM00912 haemagglutination activity domain APL_0963 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_0983 SM00861 Transketolase, pyrimidine binding domain APL_0987 SM00387 Histidine kinase-like ATPases APL_0988 SM01060 APL_0988 APL_0997 SM01038 Beta galactosidase small chain APL_1005 SM01387 APL_1005 APL_1013 SM00883 Chaperonin 10 Kd subunit APL_1015 SM01133 APL_1015 APL_1022 SM00345 helix_turn_helix gluconate operon transcriptional repressor APL_1032 SM00487 DEAD-like helicases superfamily APL_1032 SM00490 helicase superfamily c-terminal domain APL_1033 SM00830 Chorismate mutase type II APL_1055 SM00825 Beta-ketoacyl synthase APL_1063 SM00448 cheY-homologous receiver domain APL_1063 SM00862 Transcriptional regulatory protein, C terminal APL_1064 SM00387 Histidine kinase-like ATPases APL_1064 SM00388 His Kinase A (phosphoacceptor) domain APL_1066 SM01323 APL_1066 APL_1074 SM00981 APL_1074 APL_1075 SM00788 Adenylosuccinate synthetase APL_1076 SM00244 prohibitin homologues APL_1077 SM00244 prohibitin homologues APL_1087 SM00382 ATPases associated with a variety of cellular activities APL_1087 SM01086 C-terminal, D2-small domain, of ClpB protein APL_1090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APL_1094 SM00345 helix_turn_helix gluconate operon transcriptional repressor APL_1105 SM00481 DNA polymerase alpha chain like domain APL_1107 SM00563 Phosphate acyltransferases APL_1109 SM00927 DNA mismatch repair enzyme MutH APL_1113 SM01192 APL_1113 APL_1113 SM01193 APL_1113 APL_1116 SM00341 Helicase and RNase D C-terminal APL_1116 SM00487 DEAD-like helicases superfamily APL_1116 SM00490 helicase superfamily c-terminal domain APL_1116 SM00956 APL_1116 APL_1117 SM01219 APL_1117 APL_1122 SM00363 S4 RNA-binding domain APL_1126 SM00318 Staphylococcal nuclease homologues APL_1134 SM00479 APL_1134 APL_1136 SM00257 Lysin motif APL_1136 SM00646 APL_1136 APL_1141 SM01022 APL_1141 APL_1143 SM00382 ATPases associated with a variety of cellular activities APL_1160 SM00363 S4 RNA-binding domain APL_1172 SM01209 APL_1172 APL_1172 SM01210 APL_1172 APL_1196 SM00487 DEAD-like helicases superfamily APL_1208 SM00829 Enoylreductase APL_1214 SM00903 Flavin reductase like domain APL_1215 SM00382 ATPases associated with a variety of cellular activities APL_1228 SM00316 Ribosomal protein S1-like RNA-binding domain APL_1233 SM00421 helix_turn_helix, Lux Regulon APL_1236 SM00382 ATPases associated with a variety of cellular activities APL_1249 SM00382 ATPases associated with a variety of cellular activities APL_1255 SM00387 Histidine kinase-like ATPases APL_1255 SM00433 TopoisomeraseII APL_1256 SM00091 PAS domain APL_1256 SM00387 Histidine kinase-like ATPases APL_1256 SM00388 His Kinase A (phosphoacceptor) domain APL_1257 SM00448 cheY-homologous receiver domain APL_1257 SM00862 Transcriptional regulatory protein, C terminal APL_1258 SM00382 ATPases associated with a variety of cellular activities APL_1262 SM00422 helix_turn_helix, mercury resistance APL_1270 SM00731 SprT homologues. APL_1272 SM00316 Ribosomal protein S1-like RNA-binding domain APL_1272 SM00732 Likely ribonuclease with RNase H fold. APL_1273 SM00028 Tetratricopeptide repeats APL_1279 SM00382 ATPases associated with a variety of cellular activities APL_1279 SM00994 ClpX C4-type zinc finger APL_1279 SM01086 C-terminal, D2-small domain, of ClpB protein APL_1282 SM00479 APL_1282 APL_1283 SM00382 ATPases associated with a variety of cellular activities APL_1285 SM00450 Rhodanese Homology Domain APL_1292 SM00382 ATPases associated with a variety of cellular activities APL_1293 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APL_1302 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APL_1302 SM00292 breast cancer carboxy-terminal domain APL_1302 SM00532 Ligase N family APL_1303 SM00771 ZipA, C-terminal domain (FtsZ-binding) APL_1305 SM01350 APL_1305 APL_1314 SM00363 S4 RNA-binding domain APL_1320 SM00382 ATPases associated with a variety of cellular activities APL_1325 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_1339 SM00487 DEAD-like helicases superfamily APL_1339 SM00490 helicase superfamily c-terminal domain APL_1339 SM00982 APL_1339 APL_1339 SM01058 CarD-like/TRCF domain APL_1341 SM01207 APL_1341 APL_1342 SM00905 Dihydroneopterin aldolase APL_1345 SM00382 ATPases associated with a variety of cellular activities APL_1346 SM00382 ATPases associated with a variety of cellular activities APL_1346 SM00962 SRP54-type protein, GTPase domain APL_1346 SM00963 SRP54-type protein, helical bundle domain APL_1349 SM00903 Flavin reductase like domain APL_1353 SM00062 Bacterial periplasmic substrate-binding proteins APL_1354 SM00382 ATPases associated with a variety of cellular activities APL_1357 SM00530 Helix-turn-helix XRE-family like proteins APL_1365 SM00749 bacterial OsmY and nodulation domain APL_1366 SM00062 Bacterial periplasmic substrate-binding proteins APL_1372 SM00382 ATPases associated with a variety of cellular activities APL_1379 SM01235 APL_1379 APL_1380 SM01152 APL_1380 APL_1389 SM01091 Transporter associated domain APL_1399 SM00838 Elongation factor G C-terminus APL_1399 SM00889 Elongation factor G, domain IV APL_1409 SM00422 helix_turn_helix, mercury resistance APL_1419 SM00382 ATPases associated with a variety of cellular activities APL_1429 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APL_1436 SM00316 Ribosomal protein S1-like RNA-binding domain APL_1443 SM00382 ATPases associated with a variety of cellular activities APL_1448 SM00382 ATPases associated with a variety of cellular activities APL_1464 SM00382 ATPases associated with a variety of cellular activities APL_1468 SM00954 Region found in RelA / SpoT proteins APL_1474 SM00400 zinc finger APL_1474 SM00493 APL_1474 APL_1474 SM00766 DNA primase DnaG DnaB-binding APL_1476 SM00363 S4 RNA-binding domain APL_1478 SM00316 Ribosomal protein S1-like RNA-binding domain APL_1478 SM00357 Cold shock protein domain APL_1478 SM00955 APL_1478 APL_1488 SM00563 Phosphate acyltransferases APL_1495 SM00530 Helix-turn-helix XRE-family like proteins APL_1498 SM00851 MGS-like domain APL_1506 SM00257 Lysin motif APL_1508 SM00450 Rhodanese Homology Domain APL_1511 SM00971 Serine acetyltransferase, N-terminal APL_1517 SM00852 Probable molybdopterin binding domain APL_1518 SM00938 Nitrogen regulatory protein P-II APL_1523 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_1551 SM00984 UDP binding domain APL_1576 SM00116 Domain in cystathionine beta-synthase and other proteins. APL_1585 SM00382 ATPases associated with a variety of cellular activities APL_1586 SM00382 ATPases associated with a variety of cellular activities APL_1593 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_1596 SM00936 Penicillin-binding protein 5, C-terminal domain APL_1602 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APL_1602 SM00534 ATPase domain of DNA mismatch repair MUTS family APL_1603 SM00382 ATPases associated with a variety of cellular activities APL_1614 SM00988 UreE urease accessory protein, N-terminal domain APL_1620 SM00382 ATPases associated with a variety of cellular activities APL_1632 SM00420 helix_turn_helix, Deoxyribose operon repressor APL_1632 SM01134 APL_1632 APL_1636 SM00729 Elongator protein 3, MiaB family, Radical SAM APL_1646 SM00382 ATPases associated with a variety of cellular activities APL_1655 SM01228 APL_1655 APL_1657 SM00062 Bacterial periplasmic substrate-binding proteins APL_1667 SM00354 helix_turn _helix lactose operon repressor APL_1668 SM00354 helix_turn _helix lactose operon repressor APL_1670 SM00382 ATPases associated with a variety of cellular activities APL_1674 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APL_1682 SM01211 APL_1682 APL_1683 SM00420 helix_turn_helix, Deoxyribose operon repressor APL_1683 SM01134 APL_1683 APL_1687 SM01007 Class II Aldolase and Adducin N-terminal domain APL_1693 SM00382 ATPases associated with a variety of cellular activities APL_1694 SM00062 Bacterial periplasmic substrate-binding proteins APL_1698 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APL_1702 SM00420 helix_turn_helix, Deoxyribose operon repressor APL_1702 SM01134 APL_1702 APL_1704 SM01007 Class II Aldolase and Adducin N-terminal domain APL_1708 SM00028 Tetratricopeptide repeats APL_1717 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APL_1717 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APL_1718 SM00649 Ribosomal protein L11/L12 APL_1728 SM00663 RNA polymerase I subunit A N-terminus APL_1735 SM00382 ATPases associated with a variety of cellular activities APL_1735 SM01086 C-terminal, D2-small domain, of ClpB protein APL_1739 SM00478 endonuclease III APL_1739 SM00525 APL_1739 APL_1742 SM00382 ATPases associated with a variety of cellular activities APL_1742 SM00962 SRP54-type protein, GTPase domain APL_1742 SM00963 SRP54-type protein, helical bundle domain APL_1747 SM00382 ATPases associated with a variety of cellular activities APL_1754 SM01130 APL_1754 APL_1759 SM01403 APL_1759 APL_1763 SM01382 APL_1763 APL_1763 SM01383 APL_1763 APL_1766 SM00322 K homology RNA-binding domain APL_1770 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APL_1783 SM00363 S4 RNA-binding domain APL_1783 SM01390 APL_1783 APL_1784 SM00662 RNA polymerases D APL_1790 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. APL_1793 SM00382 ATPases associated with a variety of cellular activities APL_1819 SM00823 Phosphopantetheine attachment site APL_1825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APL_1825 SM00954 Region found in RelA / SpoT proteins APL_1826 SM01409 APL_1826 APL_1827 SM00487 DEAD-like helicases superfamily APL_1827 SM00490 helicase superfamily c-terminal domain APL_1838 SM00344 helix_turn_helix ASNC type APL_1848 SM00382 ATPases associated with a variety of cellular activities APL_1855 SM00460 Transglutaminase/protease-like homologues APL_1865 SM00878 Biotin carboxylase C-terminal domain APL_1877 SM00363 S4 RNA-binding domain APL_1905 SM00271 DnaJ molecular chaperone homology domain APL_1910 SM00382 ATPases associated with a variety of cellular activities APL_1912 SM00342 helix_turn_helix, arabinose operon control protein APL_1929 SM00257 Lysin motif APL_1930 SM00257 Lysin motif APL_1940 SM01234 APL_1940 APL_1941 SM01230 APL_1941 APL_1948 SM00458 Ricin-type beta-trefoil APL_1958 SM00853 MutL C terminal dimerisation domain APL_1958 SM01340 APL_1958 APL_1959 SM00829 Enoylreductase APL_1965 SM00100 Cyclic nucleotide-monophosphate binding domain APL_1965 SM00419 helix_turn_helix, cAMP Regulatory protein APL_1988 SM01004 Delta-aminolevulinic acid dehydratase APL_1990 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APL_1990 SM01232 APL_1990 APL_1992 SM00822 APL_1992 APL_1993 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APL_2008 SM00487 DEAD-like helicases superfamily APL_2008 SM00490 helicase superfamily c-terminal domain APL_2013 SM00382 ATPases associated with a variety of cellular activities APL_2022 SM01321 APL_2022 APL_2032 SM00354 helix_turn _helix lactose operon repressor APL_2033 SM00640 Glycosyl hydrolases family 32 APL_2037 SM00382 ATPases associated with a variety of cellular activities APL_2044 SM00937 APL_2044 APL_2045 SM00450 Rhodanese Homology Domain