DDU33_00020 SM00257 Lysin motif DDU33_00020 SM00646 DDU33_00020 DDU33_00030 SM00479 DDU33_00030 DDU33_00080 SM00450 Rhodanese Homology Domain DDU33_00130 SM00382 ATPases associated with a variety of cellular activities DDU33_00130 SM00994 ClpX C4-type zinc finger DDU33_00130 SM01086 C-terminal, D2-small domain, of ClpB protein DDU33_00155 SM00479 DDU33_00155 DDU33_00165 SM00382 ATPases associated with a variety of cellular activities DDU33_00175 SM00382 ATPases associated with a variety of cellular activities DDU33_00195 SM00421 helix_turn_helix, Lux Regulon DDU33_00195 SM00448 cheY-homologous receiver domain DDU33_00200 SM00981 DDU33_00200 DDU33_00205 SM00387 Histidine kinase-like ATPases DDU33_00205 SM00433 TopoisomeraseII DDU33_00230 SM00382 ATPases associated with a variety of cellular activities DDU33_00245 SM00731 SprT homologues. DDU33_00285 SM01321 DDU33_00285 DDU33_00330 SM01321 DDU33_00330 DDU33_00380 SM00749 bacterial OsmY and nodulation domain DDU33_00395 SM00382 ATPases associated with a variety of cellular activities DDU33_00470 SM00382 ATPases associated with a variety of cellular activities DDU33_00480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDU33_00495 SM00830 Chorismate mutase type II DDU33_00545 SM00493 DDU33_00545 DDU33_00555 SM01209 DDU33_00555 DDU33_00555 SM01210 DDU33_00555 DDU33_00580 SM00363 S4 RNA-binding domain DDU33_00590 SM01350 DDU33_00590 DDU33_00640 SM00363 S4 RNA-binding domain DDU33_00740 SM00860 SMI1 / KNR4 family DDU33_00745 SM00912 haemagglutination activity domain DDU33_00785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDU33_00855 SM00382 ATPases associated with a variety of cellular activities DDU33_00870 SM00382 ATPases associated with a variety of cellular activities DDU33_00880 SM00530 Helix-turn-helix XRE-family like proteins DDU33_00920 SM00421 helix_turn_helix, Lux Regulon DDU33_00920 SM00448 cheY-homologous receiver domain DDU33_00955 SM01235 DDU33_00955 DDU33_00980 SM00363 S4 RNA-binding domain DDU33_01010 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDU33_01030 SM00257 Lysin motif DDU33_01040 SM00257 Lysin motif DDU33_01080 SM00487 DEAD-like helicases superfamily DDU33_01080 SM00490 helicase superfamily c-terminal domain DDU33_01130 SM00851 MGS-like domain DDU33_01185 SM00382 ATPases associated with a variety of cellular activities DDU33_01210 SM00853 MutL C terminal dimerisation domain DDU33_01210 SM01340 DDU33_01210 DDU33_01235 SM00100 Cyclic nucleotide-monophosphate binding domain DDU33_01235 SM00419 helix_turn_helix, cAMP Regulatory protein DDU33_01315 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_01315 SM00357 Cold shock protein domain DDU33_01315 SM00955 DDU33_01315 DDU33_01320 SM00400 zinc finger DDU33_01320 SM00493 DDU33_01320 DDU33_01320 SM00766 DNA primase DnaG DnaB-binding DDU33_01365 SM00382 ATPases associated with a variety of cellular activities DDU33_01420 SM00363 S4 RNA-binding domain DDU33_01460 SM00729 Elongator protein 3, MiaB family, Radical SAM DDU33_01460 SM00876 Biotin and Thiamin Synthesis associated domain DDU33_01515 SM01004 Delta-aminolevulinic acid dehydratase DDU33_01585 SM00346 helix_turn_helix isocitrate lyase regulation DDU33_01670 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DDU33_01680 SM00869 Autotransporter beta-domain DDU33_01685 SM00869 Autotransporter beta-domain DDU33_01710 SM00257 Lysin motif DDU33_01720 SM00450 Rhodanese Homology Domain DDU33_01735 SM00971 Serine acetyltransferase, N-terminal DDU33_01770 SM00342 helix_turn_helix, arabinose operon control protein DDU33_01800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDU33_01800 SM00954 Region found in RelA / SpoT proteins DDU33_01805 SM01409 DDU33_01805 DDU33_01810 SM00382 ATPases associated with a variety of cellular activities DDU33_01845 SM00823 Phosphopantetheine attachment site DDU33_01850 SM00878 Biotin carboxylase C-terminal domain DDU33_01910 SM00852 Probable molybdopterin binding domain DDU33_01925 SM00729 Elongator protein 3, MiaB family, Radical SAM DDU33_01995 SM00344 helix_turn_helix ASNC type DDU33_02055 SM00382 ATPases associated with a variety of cellular activities DDU33_02090 SM00662 RNA polymerases D DDU33_02095 SM00363 S4 RNA-binding domain DDU33_02095 SM01390 DDU33_02095 DDU33_02160 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DDU33_02165 SM01374 DDU33_02165 DDU33_02180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDU33_02185 SM00487 DEAD-like helicases superfamily DDU33_02185 SM00490 helicase superfamily c-terminal domain DDU33_02190 SM00116 Domain in cystathionine beta-synthase and other proteins. DDU33_02225 SM00869 Autotransporter beta-domain DDU33_02230 SM00382 ATPases associated with a variety of cellular activities DDU33_02230 SM00962 SRP54-type protein, GTPase domain DDU33_02230 SM00963 SRP54-type protein, helical bundle domain DDU33_02255 SM00478 endonuclease III DDU33_02255 SM00525 DDU33_02255 DDU33_02275 SM01321 DDU33_02275 DDU33_02280 SM00382 ATPases associated with a variety of cellular activities DDU33_02280 SM01086 C-terminal, D2-small domain, of ClpB protein DDU33_02300 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDU33_02325 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDU33_02330 SM01007 Class II Aldolase and Adducin N-terminal domain DDU33_02340 SM00420 helix_turn_helix, Deoxyribose operon repressor DDU33_02340 SM01134 DDU33_02340 DDU33_02360 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DDU33_02380 SM00530 Helix-turn-helix XRE-family like proteins DDU33_02405 SM00729 Elongator protein 3, MiaB family, Radical SAM DDU33_02420 SM00936 Penicillin-binding protein 5, C-terminal domain DDU33_02450 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DDU33_02450 SM00534 ATPase domain of DNA mismatch repair MUTS family DDU33_02460 SM00530 Helix-turn-helix XRE-family like proteins DDU33_02495 SM00028 Tetratricopeptide repeats DDU33_02530 SM00382 ATPases associated with a variety of cellular activities DDU33_02670 SM00988 UreE urease accessory protein, N-terminal domain DDU33_02705 SM00382 ATPases associated with a variety of cellular activities DDU33_02730 SM00422 helix_turn_helix, mercury resistance DDU33_02755 SM00822 DDU33_02755 DDU33_02820 SM00849 Metallo-beta-lactamase superfamily DDU33_02875 SM00347 helix_turn_helix multiple antibiotic resistance protein DDU33_02875 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDU33_02895 SM00347 helix_turn_helix multiple antibiotic resistance protein DDU33_02930 SM00487 DEAD-like helicases superfamily DDU33_02980 SM00342 helix_turn_helix, arabinose operon control protein DDU33_02995 SM00347 helix_turn_helix multiple antibiotic resistance protein DDU33_03005 SM00422 helix_turn_helix, mercury resistance DDU33_03030 SM00347 helix_turn_helix multiple antibiotic resistance protein DDU33_03030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDU33_03035 SM00342 helix_turn_helix, arabinose operon control protein DDU33_03080 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDU33_03095 SM01228 DDU33_03095 DDU33_03110 SM00062 Bacterial periplasmic substrate-binding proteins DDU33_03125 SM00460 Transglutaminase/protease-like homologues DDU33_03145 SM00354 helix_turn _helix lactose operon repressor DDU33_03165 SM00382 ATPases associated with a variety of cellular activities DDU33_03210 SM00382 ATPases associated with a variety of cellular activities DDU33_03220 SM00354 helix_turn _helix lactose operon repressor DDU33_03230 SM00382 ATPases associated with a variety of cellular activities DDU33_03280 SM00870 DDU33_03280 DDU33_03295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDU33_03300 SM01211 DDU33_03300 DDU33_03405 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DDU33_03405 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DDU33_03410 SM00649 Ribosomal protein L11/L12 DDU33_03430 SM01007 Class II Aldolase and Adducin N-terminal domain DDU33_03465 SM00420 helix_turn_helix, Deoxyribose operon repressor DDU33_03465 SM01134 DDU33_03465 DDU33_03490 SM00382 ATPases associated with a variety of cellular activities DDU33_03500 SM00663 RNA polymerase I subunit A N-terminus DDU33_03530 SM01403 DDU33_03530 DDU33_03550 SM01382 DDU33_03550 DDU33_03550 SM01383 DDU33_03550 DDU33_03565 SM00322 K homology RNA-binding domain DDU33_03615 SM00420 helix_turn_helix, Deoxyribose operon repressor DDU33_03615 SM01134 DDU33_03615 DDU33_03645 SM00563 Phosphate acyltransferases DDU33_03670 SM00764 Citrate lyase ligase C-terminal domain DDU33_03810 SM00938 Nitrogen regulatory protein P-II DDU33_03845 SM00838 Elongation factor G C-terminus DDU33_03845 SM00889 Elongation factor G, domain IV DDU33_03865 SM00507 HNH nucleases DDU33_03930 SM00382 ATPases associated with a variety of cellular activities DDU33_03955 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDU33_03955 SM00866 DDU33_03955 DDU33_03990 SM01230 DDU33_03990 DDU33_04145 SM00271 DnaJ molecular chaperone homology domain DDU33_04200 SM00382 ATPases associated with a variety of cellular activities DDU33_04220 SM00642 Alpha-amylase domain DDU33_04225 SM00421 helix_turn_helix, Lux Regulon DDU33_04250 SM01234 DDU33_04250 DDU33_04290 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DDU33_04295 SM00822 DDU33_04295 DDU33_04305 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DDU33_04305 SM01232 DDU33_04305 DDU33_04350 SM00842 Cell division protein FtsA DDU33_04355 SM00864 Tubulin/FtsZ family, GTPase domain DDU33_04355 SM00865 Tubulin/FtsZ family, C-terminal domain DDU33_04400 SM01152 DDU33_04400 DDU33_04445 SM01091 Transporter associated domain DDU33_04480 SM00640 Glycosyl hydrolases family 32 DDU33_04485 SM00354 helix_turn _helix lactose operon repressor DDU33_04510 SM00382 ATPases associated with a variety of cellular activities DDU33_04580 SM00387 Histidine kinase-like ATPases DDU33_04580 SM00388 His Kinase A (phosphoacceptor) domain DDU33_04585 SM00448 cheY-homologous receiver domain DDU33_04585 SM00862 Transcriptional regulatory protein, C terminal DDU33_04695 SM00938 Nitrogen regulatory protein P-II DDU33_04725 SM00062 Bacterial periplasmic substrate-binding proteins DDU33_04795 SM00480 DNA polymerase III beta subunit DDU33_04800 SM00382 ATPases associated with a variety of cellular activities DDU33_04800 SM00760 Bacterial dnaA protein helix-turn-helix domain DDU33_04805 SM00937 DDU33_04805 DDU33_04830 SM00859 Semialdehyde dehydrogenase, NAD binding domain DDU33_05000 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_05045 SM00382 ATPases associated with a variety of cellular activities DDU33_05050 SM00062 Bacterial periplasmic substrate-binding proteins DDU33_05050 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DDU33_05065 SM00357 Cold shock protein domain DDU33_05070 SM00945 ProQ/FINO family DDU33_05075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDU33_05075 SM00245 tail specific protease DDU33_05090 SM00849 Metallo-beta-lactamase superfamily DDU33_05100 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_05100 SM00732 Likely ribonuclease with RNase H fold. DDU33_05105 SM00028 Tetratricopeptide repeats DDU33_05120 SM00836 DALR anticodon binding domain DDU33_05120 SM01016 Arginyl tRNA synthetase N terminal dom DDU33_05200 SM00448 cheY-homologous receiver domain DDU33_05200 SM00862 Transcriptional regulatory protein, C terminal DDU33_05210 SM00530 Helix-turn-helix XRE-family like proteins DDU33_05215 SM00904 Riboflavin kinase DDU33_05225 SM00155 Phospholipase D. Active site motifs. DDU33_05230 SM00967 RNA 2'-O ribose methyltransferase substrate binding DDU33_05235 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_05275 SM00729 Elongator protein 3, MiaB family, Radical SAM DDU33_05345 SM00382 ATPases associated with a variety of cellular activities DDU33_05350 SM00382 ATPases associated with a variety of cellular activities DDU33_05360 SM00883 Chaperonin 10 Kd subunit DDU33_05375 SM00855 Phosphoglycerate mutase family DDU33_05400 SM00671 Sel1-like repeats. DDU33_05465 SM00382 ATPases associated with a variety of cellular activities DDU33_05465 SM01086 C-terminal, D2-small domain, of ClpB protein DDU33_05470 SM00530 Helix-turn-helix XRE-family like proteins DDU33_05530 SM00900 DDU33_05530 DDU33_05610 SM00530 Helix-turn-helix XRE-family like proteins DDU33_05645 SM00479 DDU33_05645 DDU33_05710 SM00487 DEAD-like helicases superfamily DDU33_05770 SM00830 Chorismate mutase type II DDU33_05855 SM00487 DEAD-like helicases superfamily DDU33_05855 SM00490 helicase superfamily c-terminal domain DDU33_05880 SM00382 ATPases associated with a variety of cellular activities DDU33_05935 SM01133 DDU33_05935 DDU33_05950 SM00859 Semialdehyde dehydrogenase, NAD binding domain DDU33_05990 SM00487 DEAD-like helicases superfamily DDU33_05990 SM00490 helicase superfamily c-terminal domain DDU33_05990 SM00982 DDU33_05990 DDU33_05990 SM01058 CarD-like/TRCF domain DDU33_06090 SM00318 Staphylococcal nuclease homologues DDU33_06145 SM00448 cheY-homologous receiver domain DDU33_06145 SM00862 Transcriptional regulatory protein, C terminal DDU33_06150 SM00387 Histidine kinase-like ATPases DDU33_06150 SM00388 His Kinase A (phosphoacceptor) domain DDU33_06155 SM00382 ATPases associated with a variety of cellular activities DDU33_06160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDU33_06165 SM01091 Transporter associated domain DDU33_06175 SM00855 Phosphoglycerate mutase family DDU33_06255 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DDU33_06270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDU33_06280 SM00935 Outer membrane protein (OmpH-like) DDU33_06310 SM00481 DNA polymerase alpha chain like domain DDU33_06350 SM00382 ATPases associated with a variety of cellular activities DDU33_06380 SM00387 Histidine kinase-like ATPases DDU33_06390 SM01018 B12 binding domain DDU33_06395 SM00563 Phosphate acyltransferases DDU33_06405 SM00927 DNA mismatch repair enzyme MutH DDU33_06425 SM01192 DDU33_06425 DDU33_06425 SM01193 DDU33_06425 DDU33_06435 SM00341 Helicase and RNase D C-terminal DDU33_06435 SM00487 DEAD-like helicases superfamily DDU33_06435 SM00490 helicase superfamily c-terminal domain DDU33_06435 SM00956 DDU33_06435 DDU33_06440 SM01219 DDU33_06440 DDU33_06450 SM00954 Region found in RelA / SpoT proteins DDU33_06465 SM00363 S4 RNA-binding domain DDU33_06470 SM01323 DDU33_06470 DDU33_06505 SM01060 DDU33_06505 DDU33_06525 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDU33_06570 SM01266 DDU33_06570 DDU33_06580 SM00849 Metallo-beta-lactamase superfamily DDU33_06605 SM01266 DDU33_06605 DDU33_06650 SM00861 Transketolase, pyrimidine binding domain DDU33_06685 SM00382 ATPases associated with a variety of cellular activities DDU33_06730 SM00072 Guanylate kinase homologues. DDU33_06745 SM00382 ATPases associated with a variety of cellular activities DDU33_06775 SM00562 DDU33_06775 DDU33_06795 SM01103 DDU33_06795 DDU33_06800 SM00014 Acid phosphatase homologues DDU33_06810 SM00849 Metallo-beta-lactamase superfamily DDU33_06835 SM00732 Likely ribonuclease with RNase H fold. DDU33_06840 SM00644 DDU33_06840 DDU33_06880 SM00382 ATPases associated with a variety of cellular activities DDU33_06885 SM00382 ATPases associated with a variety of cellular activities DDU33_06910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDU33_06910 SM00465 GIY-YIG type nucleases (URI domain) DDU33_06915 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDU33_06920 SM00363 S4 RNA-binding domain DDU33_06930 SM00434 DNA Topoisomerase IV DDU33_06945 SM00382 ATPases associated with a variety of cellular activities DDU33_06985 SM00899 DDU33_06985 DDU33_07010 SM00342 helix_turn_helix, arabinose operon control protein DDU33_07015 SM00382 ATPases associated with a variety of cellular activities DDU33_07015 SM00464 Found in ATP-dependent protease La (LON) DDU33_07070 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DDU33_07075 SM00954 Region found in RelA / SpoT proteins DDU33_07080 SM00855 Phosphoglycerate mutase family DDU33_07105 SM00382 ATPases associated with a variety of cellular activities DDU33_07140 SM00967 RNA 2'-O ribose methyltransferase substrate binding DDU33_07150 SM00271 DnaJ molecular chaperone homology domain DDU33_07195 SM00729 Elongator protein 3, MiaB family, Radical SAM DDU33_07255 SM00917 LeuA allosteric (dimerisation) domain DDU33_07275 SM00861 Transketolase, pyrimidine binding domain DDU33_07285 SM00912 haemagglutination activity domain DDU33_07310 SM00382 ATPases associated with a variety of cellular activities DDU33_07340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDU33_07340 SM00387 Histidine kinase-like ATPases DDU33_07350 SM00382 ATPases associated with a variety of cellular activities DDU33_07355 SM00382 ATPases associated with a variety of cellular activities DDU33_07380 SM01130 DDU33_07380 DDU33_07405 SM00487 DEAD-like helicases superfamily DDU33_07405 SM00490 helicase superfamily c-terminal domain DDU33_07410 SM00028 Tetratricopeptide repeats DDU33_07415 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_07415 SM00322 K homology RNA-binding domain DDU33_07420 SM00434 DNA Topoisomerase IV DDU33_07440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDU33_07480 SM00358 Double-stranded RNA binding motif DDU33_07480 SM00535 Ribonuclease III family DDU33_07565 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_07565 SM00357 Cold shock protein domain DDU33_07565 SM00955 DDU33_07565 DDU33_07570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDU33_07580 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_07585 SM00411 bacterial (prokaryotic) histone like domain DDU33_07595 SM00028 Tetratricopeptide repeats DDU33_07600 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DDU33_07745 SM00481 DNA polymerase alpha chain like domain DDU33_07770 SM00530 Helix-turn-helix XRE-family like proteins DDU33_07980 SM00729 Elongator protein 3, MiaB family, Radical SAM DDU33_08000 SM00347 helix_turn_helix multiple antibiotic resistance protein DDU33_08005 SM00342 helix_turn_helix, arabinose operon control protein DDU33_08060 SM01126 DDU33_08060 DDU33_08065 SM00530 Helix-turn-helix XRE-family like proteins DDU33_08080 SM00487 DEAD-like helicases superfamily DDU33_08080 SM00974 DDU33_08080 DDU33_08095 SM00530 Helix-turn-helix XRE-family like proteins DDU33_08105 SM01126 DDU33_08105 DDU33_08110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDU33_08110 SM00387 Histidine kinase-like ATPases DDU33_08110 SM00388 His Kinase A (phosphoacceptor) domain DDU33_08115 SM00448 cheY-homologous receiver domain DDU33_08115 SM00862 Transcriptional regulatory protein, C terminal DDU33_08150 SM00487 DEAD-like helicases superfamily DDU33_08150 SM00490 helicase superfamily c-terminal domain DDU33_08155 SM00028 Tetratricopeptide repeats DDU33_08210 SM00870 DDU33_08210 DDU33_08215 SM01001 AIR carboxylase DDU33_08245 SM00382 ATPases associated with a variety of cellular activities DDU33_08275 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_08275 SM00322 K homology RNA-binding domain DDU33_08295 SM00869 Autotransporter beta-domain DDU33_08315 SM00642 Alpha-amylase domain DDU33_08320 SM00642 Alpha-amylase domain DDU33_08380 SM00382 ATPases associated with a variety of cellular activities DDU33_08400 SM00382 ATPases associated with a variety of cellular activities DDU33_08425 SM00448 cheY-homologous receiver domain DDU33_08425 SM00862 Transcriptional regulatory protein, C terminal DDU33_08430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDU33_08430 SM00387 Histidine kinase-like ATPases DDU33_08430 SM00388 His Kinase A (phosphoacceptor) domain DDU33_08435 SM00382 ATPases associated with a variety of cellular activities DDU33_08470 SM00843 DDU33_08470 DDU33_08475 SM00344 helix_turn_helix ASNC type DDU33_08480 SM00474 3'-5' exonuclease DDU33_08495 SM00382 ATPases associated with a variety of cellular activities DDU33_08505 SM00487 DEAD-like helicases superfamily DDU33_08505 SM00490 helicase superfamily c-terminal domain DDU33_08510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DDU33_08510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DDU33_08510 SM00493 DDU33_08510 DDU33_08545 SM00411 bacterial (prokaryotic) histone like domain DDU33_08550 SM00873 B3/4 domain DDU33_08550 SM00874 tRNA synthetase B5 domain DDU33_08550 SM00896 Ferredoxin-fold anticodon binding domain DDU33_08575 SM00382 ATPases associated with a variety of cellular activities DDU33_08590 SM00841 Elongation factor P, C-terminal DDU33_08590 SM01185 DDU33_08590 DDU33_08610 SM00382 ATPases associated with a variety of cellular activities DDU33_08625 SM00287 Bacterial SH3 domain homologues DDU33_08645 SM01011 Aminopeptidase P, N-terminal domain DDU33_08680 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DDU33_08680 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DDU33_08680 SM00493 DDU33_08680 DDU33_08765 SM00382 ATPases associated with a variety of cellular activities DDU33_08770 SM00382 ATPases associated with a variety of cellular activities DDU33_08780 SM00116 Domain in cystathionine beta-synthase and other proteins. DDU33_08780 SM01240 DDU33_08780 DDU33_08845 SM01400 DDU33_08845 DDU33_08870 SM00382 ATPases associated with a variety of cellular activities DDU33_08905 SM00861 Transketolase, pyrimidine binding domain DDU33_08915 SM01130 DDU33_08915 DDU33_08950 SM01120 DDU33_08950 DDU33_09035 SM00947 Carbonic anhydrase DDU33_09080 SM00849 Metallo-beta-lactamase superfamily DDU33_09110 SM01118 DDU33_09110 DDU33_09135 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DDU33_09135 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DDU33_09160 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DDU33_09170 SM00100 Cyclic nucleotide-monophosphate binding domain DDU33_09170 SM00419 helix_turn_helix, cAMP Regulatory protein DDU33_09265 SM00382 ATPases associated with a variety of cellular activities DDU33_09275 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DDU33_09285 SM00478 endonuclease III DDU33_09285 SM00525 DDU33_09285 DDU33_09340 SM00530 Helix-turn-helix XRE-family like proteins DDU33_09345 SM00840 DDU33_09345 DDU33_09355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDU33_09360 SM00530 Helix-turn-helix XRE-family like proteins DDU33_09410 SM00271 DnaJ molecular chaperone homology domain DDU33_09445 SM00387 Histidine kinase-like ATPases DDU33_09445 SM00388 His Kinase A (phosphoacceptor) domain DDU33_09445 SM00448 cheY-homologous receiver domain DDU33_09455 SM00463 Small MutS-related domain DDU33_09480 SM00382 ATPases associated with a variety of cellular activities DDU33_09495 SM00650 Ribosomal RNA adenine dimethylases DDU33_09500 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DDU33_09520 SM00487 DEAD-like helicases superfamily DDU33_09520 SM00491 DDU33_09520 DDU33_09525 SM00382 ATPases associated with a variety of cellular activities DDU33_09555 SM00382 ATPases associated with a variety of cellular activities DDU33_09575 SM00382 ATPases associated with a variety of cellular activities DDU33_09600 SM00530 Helix-turn-helix XRE-family like proteins DDU33_09620 SM00528 Domain in histone-like proteins of HNS family DDU33_09640 SM00354 helix_turn _helix lactose operon repressor DDU33_09685 SM00729 Elongator protein 3, MiaB family, Radical SAM DDU33_09715 SM01387 DDU33_09715 DDU33_09735 SM00116 Domain in cystathionine beta-synthase and other proteins. DDU33_09735 SM01091 Transporter associated domain DDU33_09775 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DDU33_09775 SM00474 3'-5' exonuclease DDU33_09775 SM00475 5'-3' exonuclease DDU33_09775 SM00482 DNA polymerase A domain DDU33_09780 SM00530 Helix-turn-helix XRE-family like proteins DDU33_09825 SM01329 DDU33_09825 DDU33_09865 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDU33_09915 SM00881 CoA binding domain DDU33_09920 SM00387 Histidine kinase-like ATPases DDU33_09920 SM00433 TopoisomeraseII DDU33_09930 SM00642 Alpha-amylase domain DDU33_09940 SM00354 helix_turn _helix lactose operon repressor DDU33_09950 SM00382 ATPases associated with a variety of cellular activities DDU33_09970 SM00925 MltA specific insert domain DDU33_09990 SM00316 Ribosomal protein S1-like RNA-binding domain DDU33_10000 SM00382 ATPases associated with a variety of cellular activities DDU33_10030 SM00487 DEAD-like helicases superfamily DDU33_10030 SM00490 helicase superfamily c-terminal domain DDU33_10065 SM01038 Beta galactosidase small chain DDU33_10095 SM00354 helix_turn _helix lactose operon repressor DDU33_10110 SM00852 Probable molybdopterin binding domain DDU33_10165 SM00382 ATPases associated with a variety of cellular activities DDU33_10165 SM00487 DEAD-like helicases superfamily DDU33_10165 SM00490 helicase superfamily c-terminal domain DDU33_10165 SM00847 Helicase associated domain (HA2) Add an annotation DDU33_10180 SM00382 ATPases associated with a variety of cellular activities DDU33_10185 SM00382 ATPases associated with a variety of cellular activities DDU33_10190 SM00986 Uracil DNA glycosylase superfamily DDU33_10190 SM00987 UreE urease accessory protein, C-terminal domain DDU33_10210 SM00518 AP endonuclease family 2 DDU33_10270 SM00798 AICARFT/IMPCHase bienzyme DDU33_10270 SM00851 MGS-like domain DDU33_10280 SM00382 ATPases associated with a variety of cellular activities DDU33_10280 SM00930 DDU33_10280 DDU33_10300 SM00382 ATPases associated with a variety of cellular activities DDU33_10345 SM00244 prohibitin homologues DDU33_10350 SM00981 DDU33_10350 DDU33_10355 SM00788 Adenylosuccinate synthetase DDU33_10360 SM00244 prohibitin homologues DDU33_10365 SM00244 prohibitin homologues DDU33_10390 SM00382 ATPases associated with a variety of cellular activities DDU33_10395 SM01005 Alanine racemase, C-terminal domain DDU33_10415 SM00530 Helix-turn-helix XRE-family like proteins DDU33_10425 SM00530 Helix-turn-helix XRE-family like proteins DDU33_10445 SM00357 Cold shock protein domain DDU33_10445 SM00382 ATPases associated with a variety of cellular activities DDU33_10445 SM00959 Rho termination factor, N-terminal domain DDU33_10500 SM00411 bacterial (prokaryotic) histone like domain DDU33_10510 SM00771 ZipA, C-terminal domain (FtsZ-binding) DDU33_10515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDU33_10515 SM00292 breast cancer carboxy-terminal domain DDU33_10515 SM00532 Ligase N family DDU33_10555 SM00900 DDU33_10555 DDU33_10560 SM01266 DDU33_10560 DDU33_10570 SM01091 Transporter associated domain DDU33_10590 SM00382 ATPases associated with a variety of cellular activities DDU33_10660 SM01207 DDU33_10660 DDU33_10665 SM00905 Dihydroneopterin aldolase DDU33_10680 SM00382 ATPases associated with a variety of cellular activities DDU33_10685 SM00382 ATPases associated with a variety of cellular activities DDU33_10685 SM00962 SRP54-type protein, GTPase domain DDU33_10685 SM00963 SRP54-type protein, helical bundle domain DDU33_10700 SM00825 Beta-ketoacyl synthase DDU33_10730 SM00028 Tetratricopeptide repeats DDU33_10745 SM00957 SecA DEAD-like domain DDU33_10745 SM00958 SecA preprotein cross-linking domain DDU33_10755 SM00422 helix_turn_helix, mercury resistance DDU33_10815 SM00382 ATPases associated with a variety of cellular activities DDU33_10840 SM00382 ATPases associated with a variety of cellular activities