DDU33_04285 4e09234ce9b1c6a8114de3120cbe7132 246 Pfam PF02677 Uncharacterized BCR, COG1636 44 222 5.4E-60 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 DDU33_04285 4e09234ce9b1c6a8114de3120cbe7132 246 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 44 224 32.551 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 DDU33_02995 bfe49a68ab24f8dc89136ead851099f6 147 Gene3D G3DSA:1.10.10.10 27 92 6.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_02995 bfe49a68ab24f8dc89136ead851099f6 147 SMART SM00347 20 122 2.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_02995 bfe49a68ab24f8dc89136ead851099f6 147 Pfam PF12802 MarR family 26 86 1.4E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_02995 bfe49a68ab24f8dc89136ead851099f6 147 SUPERFAMILY SSF46785 14 138 3.0E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_05765 1daeef1f7f0105e364901cf2395edfcc 97 Gene3D G3DSA:3.30.70.240 1 97 8.9E-35 T 14-10-2018 DDU33_05765 1daeef1f7f0105e364901cf2395edfcc 97 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 96 9.0E-17 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DDU33_05765 1daeef1f7f0105e364901cf2395edfcc 97 SUPERFAMILY SSF143430 1 89 9.42E-27 T 14-10-2018 DDU33_05765 1daeef1f7f0105e364901cf2395edfcc 97 PIRSF PIRSF032582 1 97 3.7E-37 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DDU33_05765 1daeef1f7f0105e364901cf2395edfcc 97 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 95 14.62 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DDU33_05765 1daeef1f7f0105e364901cf2395edfcc 97 Pfam PF09827 CRISPR associated protein Cas2 1 78 5.2E-24 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 796 1.1E-6 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Pfam PF08272 Topoisomerase I zinc-ribbon-like 827 866 5.7E-18 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 SUPERFAMILY SSF57783 747 810 1.34E-16 T 14-10-2018 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 SMART SM00437 278 533 3.4E-125 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 SMART SM00493 3 139 2.2E-33 T 14-10-2018 IPR006171 TOPRIM domain DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 8.2E-250 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Gene3D G3DSA:1.10.460.10 172 577 3.8E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Gene3D G3DSA:3.30.65.10 747 810 5.9E-25 T 14-10-2018 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Gene3D G3DSA:3.40.50.140 1 170 7.6E-68 T 14-10-2018 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 SUPERFAMILY SSF56712 3 615 1.57E-202 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Pfam PF01751 Toprim domain 5 149 2.3E-34 T 14-10-2018 IPR006171 TOPRIM domain DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Gene3D G3DSA:1.10.290.10 286 410 3.8E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 SMART SM00436 140 228 4.8E-49 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Gene3D G3DSA:2.20.25.10 811 866 2.3E-26 T 14-10-2018 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 4.3E-6 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 714 748 8.2E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 SUPERFAMILY SSF57783 812 865 4.25E-20 T 14-10-2018 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 SUPERFAMILY SSF57783 705 745 2.21E-6 T 14-10-2018 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Pfam PF01131 DNA topoisomerase 165 569 8.4E-130 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Gene3D G3DSA:2.70.20.10 220 479 3.8E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DDU33_08510 a33ca82adc873bbdeb54b7b033f4ecf8 866 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 56.009 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 Pfam PF03466 LysR substrate binding domain 92 295 6.5E-39 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 SUPERFAMILY SSF53850 94 295 5.25E-38 T 14-10-2018 DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 Gene3D G3DSA:3.40.190.10 95 293 1.8E-75 T 14-10-2018 DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 SUPERFAMILY SSF46785 4 116 1.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 Gene3D G3DSA:3.40.190.10 167 271 1.8E-75 T 14-10-2018 DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 Gene3D G3DSA:1.10.10.10 5 94 7.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04995 c430990cf1b9e44755511f7dcf4c3310 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 Pfam PF00005 ABC transporter 328 459 3.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 Pfam PF12848 ABC transporter 217 296 2.7E-28 T 14-10-2018 IPR032781 ABC-transporter extension domain DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 SMART SM00382 26 223 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 SMART SM00382 337 501 3.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 SUPERFAMILY SSF52540 294 515 8.26E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 Gene3D G3DSA:3.40.50.300 276 543 3.4E-55 T 14-10-2018 DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 SUPERFAMILY SSF52540 2 239 1.03E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 Pfam PF00005 ABC transporter 17 178 2.6E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10000 c8a53b3b3e92feafa2c976bf5be98bf0 639 Gene3D G3DSA:3.40.50.300 8 274 9.4E-59 T 14-10-2018 DDU33_01505 b738fcf6925d347d2eea826ce57a52e0 198 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.0E-30 T 14-10-2018 DDU33_01505 b738fcf6925d347d2eea826ce57a52e0 198 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.0E-30 T 14-10-2018 DDU33_01505 b738fcf6925d347d2eea826ce57a52e0 198 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.0E-30 T 14-10-2018 DDU33_01505 b738fcf6925d347d2eea826ce57a52e0 198 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 174 18.5 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DDU33_01505 b738fcf6925d347d2eea826ce57a52e0 198 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.3E-29 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DDU33_08955 9f718cac37754582a77ba16b5f8a53e7 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 3.1E-145 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 DDU33_08955 9f718cac37754582a77ba16b5f8a53e7 356 Pfam PF02733 Dak1 domain 17 351 2.0E-124 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DDU33_08955 9f718cac37754582a77ba16b5f8a53e7 356 Gene3D G3DSA:3.30.1180.20 184 356 8.6E-61 T 14-10-2018 DDU33_08955 9f718cac37754582a77ba16b5f8a53e7 356 Gene3D G3DSA:3.40.50.10440 11 183 1.3E-64 T 14-10-2018 DDU33_08955 9f718cac37754582a77ba16b5f8a53e7 356 SUPERFAMILY SSF82549 11 355 2.88E-124 T 14-10-2018 DDU33_01335 86c8027d7bef6de1c9445c5161934c82 303 Gene3D G3DSA:3.90.550.10 1 220 8.1E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01335 86c8027d7bef6de1c9445c5161934c82 303 SUPERFAMILY SSF53448 1 280 1.53E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01335 86c8027d7bef6de1c9445c5161934c82 303 Pfam PF00535 Glycosyl transferase family 2 5 173 2.0E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_03170 90dde3b614b66cdd0df5b3878602a132 96 Gene3D G3DSA:3.30.70.860 23 96 2.8E-25 T 14-10-2018 IPR035571 UPF0234-like, C-terminal DDU33_03170 90dde3b614b66cdd0df5b3878602a132 96 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 2 94 2.3E-38 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 DDU33_03170 90dde3b614b66cdd0df5b3878602a132 96 Pfam PF04175 Protein of unknown function (DUF406) 4 94 3.6E-34 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 PIRSF PIRSF000732 1 573 2.1E-216 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 Gene3D G3DSA:3.20.20.60 234 572 2.2E-126 T 14-10-2018 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 SUPERFAMILY SSF52009 125 245 6.15E-37 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.2E-29 T 14-10-2018 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.2E-29 T 14-10-2018 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.2E-29 T 14-10-2018 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.2E-29 T 14-10-2018 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 SUPERFAMILY SSF47831 25 143 1.05E-32 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 1.3E-239 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.8E-28 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 Gene3D G3DSA:3.50.30.10 4 233 3.0E-77 T 14-10-2018 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 Gene3D G3DSA:1.10.274.10 21 146 3.0E-77 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 SUPERFAMILY SSF51621 249 549 9.16E-109 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.8E-22 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DDU33_00840 9dd9ce66d0bf1d56e4fb55e3b7ac1af6 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 2.1E-123 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DDU33_03800 2b8a5e359f73bdc8f89ef4bb4d4e3536 308 PIRSF PIRSF002936 2 308 4.3E-136 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDU33_03800 2b8a5e359f73bdc8f89ef4bb4d4e3536 308 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 32 261 8.5E-44 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DDU33_03800 2b8a5e359f73bdc8f89ef4bb4d4e3536 308 SUPERFAMILY SSF52402 10 216 3.75E-60 T 14-10-2018 DDU33_03800 2b8a5e359f73bdc8f89ef4bb4d4e3536 308 Gene3D G3DSA:3.40.50.620 10 218 2.9E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_03800 2b8a5e359f73bdc8f89ef4bb4d4e3536 308 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 12 308 2.6E-120 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 SUPERFAMILY SSF57938 139 216 2.22E-22 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 SUPERFAMILY SSF49493 119 267 7.85E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Gene3D G3DSA:2.60.260.20 122 254 1.4E-37 T 14-10-2018 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 SMART SM00271 4 62 8.2E-32 T 14-10-2018 IPR001623 DnaJ domain DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 7.3E-142 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 SUPERFAMILY SSF49493 264 349 1.05E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Pfam PF00226 DnaJ domain 5 67 4.0E-28 T 14-10-2018 IPR001623 DnaJ domain DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 42.038 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 PRINTS PR00625 DnaJ domain signature 62 81 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 PRINTS PR00625 DnaJ domain signature 7 25 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 PRINTS PR00625 DnaJ domain signature 25 40 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 PRINTS PR00625 DnaJ domain signature 42 62 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Gene3D G3DSA:1.10.287.110 1 118 1.1E-39 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Pfam PF01556 DnaJ C terminal domain 126 338 1.4E-43 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Gene3D G3DSA:2.60.260.20 259 368 4.8E-30 T 14-10-2018 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Gene3D G3DSA:2.10.230.10 152 212 1.4E-37 T 14-10-2018 DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 SUPERFAMILY SSF46565 1 107 1.16E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DDU33_04145 eb16763c34c907e97c645b6c2ec54ff4 382 Pfam PF00684 DnaJ central domain 152 212 1.6E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DDU33_05610 39db97badfbf584fba1817f6aeebbea0 129 Gene3D G3DSA:1.10.260.40 2 122 3.2E-18 T 14-10-2018 DDU33_05610 39db97badfbf584fba1817f6aeebbea0 129 ProDom PD740661 HI1458 EAG0009 74 126 4.0E-8 T 14-10-2018 DDU33_05610 39db97badfbf584fba1817f6aeebbea0 129 Pfam PF01381 Helix-turn-helix 7 60 1.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_05610 39db97badfbf584fba1817f6aeebbea0 129 SUPERFAMILY SSF47413 3 66 1.31E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_05610 39db97badfbf584fba1817f6aeebbea0 129 SMART SM00530 6 61 6.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_00450 311f663704b0cd1174dec238b9909b29 109 Pfam PF13466 STAS domain 20 100 4.3E-13 T 14-10-2018 IPR002645 STAS domain DDU33_00450 311f663704b0cd1174dec238b9909b29 109 Gene3D G3DSA:3.30.750.24 5 107 9.0E-10 T 14-10-2018 IPR036513 STAS domain superfamily DDU33_00450 311f663704b0cd1174dec238b9909b29 109 SUPERFAMILY SSF52091 7 105 2.16E-16 T 14-10-2018 IPR036513 STAS domain superfamily DDU33_07035 4dd44d48c9bbf16d9a97a36895770b69 153 Gene3D G3DSA:3.40.50.960 1 153 1.6E-66 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07035 4dd44d48c9bbf16d9a97a36895770b69 153 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 2.1E-61 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07035 4dd44d48c9bbf16d9a97a36895770b69 153 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 32.347 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07035 4dd44d48c9bbf16d9a97a36895770b69 153 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 7.6E-62 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07035 4dd44d48c9bbf16d9a97a36895770b69 153 SUPERFAMILY SSF52121 5 153 1.11E-65 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_02400 59c30d0527344c8f14501b315ccbf785 486 SUPERFAMILY SSF111283 18 485 6.41E-125 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DDU33_02400 59c30d0527344c8f14501b315ccbf785 486 PIRSF PIRSF004919 15 486 7.0E-137 T 14-10-2018 IPR025502 TldD DDU33_02400 59c30d0527344c8f14501b315ccbf785 486 Gene3D G3DSA:3.30.2290.10 16 245 3.3E-17 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DDU33_02400 59c30d0527344c8f14501b315ccbf785 486 Pfam PF01523 Putative modulator of DNA gyrase 34 337 1.1E-64 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DDU33_03015 4e0df033075391aa0173b0b97f8eb32e 219 SUPERFAMILY SSF51735 1 218 9.43E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_03015 4e0df033075391aa0173b0b97f8eb32e 219 Pfam PF13460 NAD(P)H-binding 8 203 8.3E-31 T 14-10-2018 IPR016040 NAD(P)-binding domain DDU33_03015 4e0df033075391aa0173b0b97f8eb32e 219 Gene3D G3DSA:3.40.50.720 3 219 1.5E-48 T 14-10-2018 DDU33_00275 5d6a26033d1e053bb84d13e5fd782227 143 Pfam PF13673 Acetyltransferase (GNAT) domain 23 141 1.0E-22 T 14-10-2018 IPR000182 GNAT domain DDU33_00275 5d6a26033d1e053bb84d13e5fd782227 143 Gene3D G3DSA:3.40.630.30 1 142 3.8E-43 T 14-10-2018 DDU33_00275 5d6a26033d1e053bb84d13e5fd782227 143 SUPERFAMILY SSF55729 1 142 3.9E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 SUPERFAMILY SSF51569 3 303 6.78E-90 T 14-10-2018 DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 SUPERFAMILY SSF51230 528 602 1.1E-20 T 14-10-2018 IPR011053 Single hybrid motif DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 599 1.0E-287 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 Pfam PF02436 Conserved carboxylase domain 295 499 5.2E-54 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 559 576 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 Gene3D G3DSA:3.20.20.70 1 466 1.8E-168 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 Pfam PF00364 Biotin-requiring enzyme 536 602 6.7E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 SUPERFAMILY SSF89000 300 464 6.67E-47 T 14-10-2018 DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 Pfam PF00682 HMGL-like 7 273 1.8E-64 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DDU33_04610 c8e534aa3a499a9d546d763dd0796bb3 603 Gene3D G3DSA:2.40.50.100 529 603 4.9E-23 T 14-10-2018 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 Gene3D G3DSA:3.40.228.10 1 271 6.8E-76 T 14-10-2018 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 717 744 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 Pfam PF01568 Molydopterin dinucleotide binding domain 683 798 2.0E-16 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 Gene3D G3DSA:2.40.40.20 629 805 4.8E-71 T 14-10-2018 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 SUPERFAMILY SSF53706 1 639 1.93E-230 T 14-10-2018 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 Pfam PF00384 Molybdopterin oxidoreductase 2 447 9.9E-32 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 804 0.0 T 14-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 Gene3D G3DSA:3.40.50.740 305 466 3.1E-54 T 14-10-2018 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 Gene3D G3DSA:3.40.228.10 467 628 1.0E-25 T 14-10-2018 DDU33_09870 4a530f6bb7b94d1b6df0e89cc98f1b22 809 SUPERFAMILY SSF50692 619 804 2.49E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 6 239 9.5E-100 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 241 122.654 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 SMART SM00345 16 75 2.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 7.0E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 Gene3D G3DSA:1.10.10.10 5 83 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 SUPERFAMILY SSF46785 11 79 4.44E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 Gene3D G3DSA:1.20.120.530 85 241 1.4E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 SUPERFAMILY SSF48008 83 234 1.57E-52 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DDU33_06525 bceb410aeaa0efe98b113d911d0c3624 241 Pfam PF07840 FadR C-terminal domain 76 238 4.7E-57 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 DDU33_02150 b141b6b0e4f6d7149c679622a3982a46 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.076 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DDU33_02150 b141b6b0e4f6d7149c679622a3982a46 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02150 b141b6b0e4f6d7149c679622a3982a46 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.1E-27 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02150 b141b6b0e4f6d7149c679622a3982a46 101 SUPERFAMILY SSF57716 2 101 2.0E-38 T 14-10-2018 DDU33_02150 b141b6b0e4f6d7149c679622a3982a46 101 Gene3D G3DSA:4.10.830.10 40 101 7.0E-24 T 14-10-2018 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 Gene3D G3DSA:1.10.10.1800 459 550 2.3E-31 T 14-10-2018 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 Gene3D G3DSA:3.50.50.60 304 458 4.1E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 Gene3D G3DSA:3.50.50.60 1 234 9.1E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 Pfam PF13932 GidA associated domain 402 616 1.2E-75 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 Pfam PF01134 Glucose inhibited division protein A 8 399 2.9E-165 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 SUPERFAMILY SSF51905 6 261 3.25E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 9.5E-292 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 41.994 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 SMART SM01228 546 617 1.3E-44 T 14-10-2018 DDU33_03095 4e8f37ef0479510fcfbf91681297839e 630 Gene3D G3DSA:1.10.150.570 569 622 9.1E-24 T 14-10-2018 DDU33_05345 5921624ed01985ab6a1e86a336099539 325 SMART SM00382 32 239 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_05345 5921624ed01985ab6a1e86a336099539 325 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_05345 5921624ed01985ab6a1e86a336099539 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 4.7E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_05345 5921624ed01985ab6a1e86a336099539 325 SUPERFAMILY SSF52540 3 253 2.72E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05345 5921624ed01985ab6a1e86a336099539 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.3E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_05345 5921624ed01985ab6a1e86a336099539 325 Gene3D G3DSA:3.40.50.300 1 321 9.8E-96 T 14-10-2018 DDU33_05345 5921624ed01985ab6a1e86a336099539 325 Pfam PF00005 ABC transporter 24 181 8.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_09850 797f8a8066bf3df9f5fad35281309b35 459 Pfam PF03313 Serine dehydratase alpha chain 187 452 6.7E-98 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DDU33_09850 797f8a8066bf3df9f5fad35281309b35 459 SUPERFAMILY SSF143548 16 162 5.75E-43 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DDU33_09850 797f8a8066bf3df9f5fad35281309b35 459 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 455 1.6E-219 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DDU33_09850 797f8a8066bf3df9f5fad35281309b35 459 Pfam PF03315 Serine dehydratase beta chain 3 159 8.8E-55 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DDU33_09850 797f8a8066bf3df9f5fad35281309b35 459 Gene3D G3DSA:3.30.1330.90 10 163 3.6E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 177 3.8E-40 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 SUPERFAMILY SSF52490 13 212 6.28E-64 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 SMART SM00864 13 209 4.1E-102 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 PRINTS PR00423 Cell division protein FtsZ signature 130 151 1.6E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 PRINTS PR00423 Cell division protein FtsZ signature 193 215 1.6E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 PRINTS PR00423 Cell division protein FtsZ signature 216 237 1.6E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 PRINTS PR00423 Cell division protein FtsZ signature 102 122 1.6E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 Gene3D G3DSA:3.40.50.1440 6 223 1.6E-76 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 361 36.102 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 Pfam PF12327 FtsZ family, C-terminal domain 226 320 1.5E-34 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 335 6.0E-130 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 ProSitePatterns PS01135 FtsZ protein signature 2. 101 122 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 Gene3D G3DSA:3.30.1330.20 225 334 1.1E-35 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 SUPERFAMILY SSF55307 209 323 3.89E-40 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 SMART SM00865 211 329 2.7E-49 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DDU33_04355 7b431ca828e211b432e22e81479ab35d 412 ProSitePatterns PS01134 FtsZ protein signature 1. 48 82 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DDU33_04985 3fd0da671e3da560f77be81ff0a1c108 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 385 42.257 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DDU33_04985 3fd0da671e3da560f77be81ff0a1c108 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 383 1.2E-167 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DDU33_04985 3fd0da671e3da560f77be81ff0a1c108 391 Pfam PF02684 Lipid-A-disaccharide synthetase 8 380 1.3E-146 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DDU33_04985 3fd0da671e3da560f77be81ff0a1c108 391 SUPERFAMILY SSF53756 8 347 3.39E-29 T 14-10-2018 DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 Pfam PF03797 Autotransporter beta-domain 224 449 6.5E-36 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 17 470 1.3E-66 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 Gene3D G3DSA:2.160.20.20 1 121 1.8E-38 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 SUPERFAMILY SSF103515 193 470 2.22E-35 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 Pfam PF03212 Pertactin 2 115 2.9E-26 T 14-10-2018 IPR004899 Pertactin, central region DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 SUPERFAMILY SSF51126 1 116 4.71E-28 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 SMART SM00869 221 459 1.0E-29 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_01680 d6c80919389e6ba282bf65ea7cc2d943 470 Gene3D G3DSA:2.40.128.130 179 470 1.6E-54 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_06890 778edba40780cd1b035a6ad823546552 179 SUPERFAMILY SSF53271 9 176 1.8E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_06890 778edba40780cd1b035a6ad823546552 179 Pfam PF00156 Phosphoribosyl transferase domain 29 151 5.8E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDU33_06890 778edba40780cd1b035a6ad823546552 179 Gene3D G3DSA:3.40.50.2020 1 179 2.3E-64 T 14-10-2018 DDU33_06890 778edba40780cd1b035a6ad823546552 179 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 175 1.0E-68 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DDU33_06890 778edba40780cd1b035a6ad823546552 179 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 7 176 36.47 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 517 3.8E-129 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 Pfam PF03023 MviN-like protein 30 491 2.9E-147 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PRINTS PR01806 Virulence factor MviN signature 372 391 2.1E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PRINTS PR01806 Virulence factor MviN signature 54 70 2.1E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PRINTS PR01806 Virulence factor MviN signature 166 187 2.1E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PRINTS PR01806 Virulence factor MviN signature 35 54 2.1E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PRINTS PR01806 Virulence factor MviN signature 423 440 2.1E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PRINTS PR01806 Virulence factor MviN signature 142 166 2.1E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PRINTS PR01806 Virulence factor MviN signature 268 294 2.1E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 481 19.328 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_02175 0749d2280e6f6803dd3eb67bde5245a9 522 PIRSF PIRSF002869 1 521 9.4E-148 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 PRINTS PR01607 Apyrase family signature 253 276 1.9E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 PRINTS PR01607 Apyrase family signature 225 242 1.9E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 PRINTS PR01607 Apyrase family signature 540 559 1.9E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 PRINTS PR01607 Apyrase family signature 438 461 1.9E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 PRINTS PR01607 Apyrase family signature 293 313 1.9E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 PRINTS PR01607 Apyrase family signature 32 50 1.9E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 Pfam PF00149 Calcineurin-like phosphoesterase 34 270 4.6E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 SUPERFAMILY SSF55816 365 607 4.84E-39 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 32 657 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 558 3.9E-22 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 ProSitePatterns PS00786 5'-nucleotidase signature 2. 119 130 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 Gene3D G3DSA:3.90.780.10 425 598 1.6E-51 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 Gene3D G3DSA:3.60.21.10 28 364 3.5E-124 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DDU33_09375 5ad1774513f011cc01c15c9b68e54be3 657 SUPERFAMILY SSF56300 31 364 2.48E-82 T 14-10-2018 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 PRINTS PR00421 Thioredoxin family signature 21 29 7.2E-10 T 14-10-2018 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 PRINTS PR00421 Thioredoxin family signature 69 80 7.2E-10 T 14-10-2018 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 PRINTS PR00421 Thioredoxin family signature 29 38 7.2E-10 T 14-10-2018 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 SUPERFAMILY SSF52833 4 105 2.27E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 PIRSF PIRSF000077 1 105 6.1E-46 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 Pfam PF00085 Thioredoxin 3 103 5.5E-35 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 104 5.0E-41 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DDU33_06940 1de6d3130310def8c47e7b5d64367997 105 Gene3D G3DSA:3.40.30.10 1 105 1.1E-38 T 14-10-2018 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 PRINTS PR00175 Sodium/alanine symporter signature 213 232 3.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 PRINTS PR00175 Sodium/alanine symporter signature 414 434 3.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 PRINTS PR00175 Sodium/alanine symporter signature 308 326 3.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 PRINTS PR00175 Sodium/alanine symporter signature 353 375 3.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 PRINTS PR00175 Sodium/alanine symporter signature 185 203 3.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 PRINTS PR00175 Sodium/alanine symporter signature 91 113 3.9E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 Pfam PF01235 Sodium:alanine symporter family 54 453 1.5E-144 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 445 6.8E-159 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_05365 9da2b12789d798f57a47feba1b02e041 455 Gene3D G3DSA:1.20.1740.10 58 450 2.8E-5 T 14-10-2018 DDU33_08095 f8eb87066b828ded767904bff0ec76cc 69 SUPERFAMILY SSF47413 5 69 4.56E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_08095 f8eb87066b828ded767904bff0ec76cc 69 Gene3D G3DSA:1.10.260.40 1 69 2.5E-21 T 14-10-2018 DDU33_08095 f8eb87066b828ded767904bff0ec76cc 69 SMART SM00530 13 68 8.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_08095 f8eb87066b828ded767904bff0ec76cc 69 Pfam PF01381 Helix-turn-helix 14 68 2.6E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_02775 a6605ab4b2e8b4f322f7fe06961db47c 349 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 43 184 1.1E-8 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 DDU33_02775 a6605ab4b2e8b4f322f7fe06961db47c 349 SUPERFAMILY SSF53474 15 349 6.0E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_02775 a6605ab4b2e8b4f322f7fe06961db47c 349 Gene3D G3DSA:3.40.50.1820 37 331 3.0E-101 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_02775 a6605ab4b2e8b4f322f7fe06961db47c 349 Gene3D G3DSA:1.10.10.800 170 278 3.0E-101 T 14-10-2018 DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 Gene3D G3DSA:3.30.230.70 10 238 4.0E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 2.6E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 3.6E-116 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.1E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.49 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 SUPERFAMILY SSF54211 1 181 1.47E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_00425 b67bbd9cd07088e1cf4fac003b0a952a 238 SUPERFAMILY SSF55666 153 237 1.57E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Pfam PF08264 Anticodon-binding domain of tRNA 677 825 7.9E-43 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 637 1.8E-232 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 PRINTS PR00986 Valyl-tRNA synthetase signature 475 496 1.0E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 PRINTS PR00986 Valyl-tRNA synthetase signature 242 259 1.0E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 1.0E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 PRINTS PR00986 Valyl-tRNA synthetase signature 375 388 1.0E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 PRINTS PR00986 Valyl-tRNA synthetase signature 506 524 1.0E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 SUPERFAMILY SSF52374 6 647 1.2E-135 T 14-10-2018 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 SUPERFAMILY SSF47323 648 902 1.23E-69 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Hamap MF_02004 Valine--tRNA ligase [valS]. 7 952 16.161 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Gene3D G3DSA:3.90.740.10 203 363 4.3E-53 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Gene3D G3DSA:1.10.730.10 641 819 3.7E-55 T 14-10-2018 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 SUPERFAMILY SSF50677 196 371 5.62E-61 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 934 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Gene3D G3DSA:3.40.50.620 364 636 7.7E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Gene3D G3DSA:3.40.50.620 8 202 4.6E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Gene3D G3DSA:1.10.287.380 880 952 3.7E-20 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 889 949 3.2E-18 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DDU33_00255 0119192e0e7d107f49136e759768b4ed 954 SUPERFAMILY SSF46589 887 951 3.45E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DDU33_08705 71a25809cbdc54870cc274c4532484c4 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 1.2E-81 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DDU33_08705 71a25809cbdc54870cc274c4532484c4 185 Pfam PF01765 Ribosome recycling factor 20 183 2.3E-65 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DDU33_08705 71a25809cbdc54870cc274c4532484c4 185 Gene3D G3DSA:1.10.132.20 12 182 7.6E-70 T 14-10-2018 DDU33_08705 71a25809cbdc54870cc274c4532484c4 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.156 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DDU33_08705 71a25809cbdc54870cc274c4532484c4 185 SUPERFAMILY SSF55194 2 183 3.4E-72 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DDU33_08705 71a25809cbdc54870cc274c4532484c4 185 Gene3D G3DSA:3.30.1360.40 31 105 7.6E-70 T 14-10-2018 DDU33_06560 d985a5419d499eb92aa71c651545bfe0 329 SUPERFAMILY SSF51735 4 263 5.63E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_06560 d985a5419d499eb92aa71c651545bfe0 329 Pfam PF13460 NAD(P)H-binding 12 215 6.8E-18 T 14-10-2018 IPR016040 NAD(P)-binding domain DDU33_06560 d985a5419d499eb92aa71c651545bfe0 329 Gene3D G3DSA:3.40.50.720 4 320 1.0E-43 T 14-10-2018 DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 363 374 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 Gene3D G3DSA:3.40.50.10420 125 295 6.4E-12 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 SUPERFAMILY SSF46548 274 393 2.62E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 SUPERFAMILY SSF100950 65 296 5.86E-38 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 Pfam PF11870 Domain of unknown function (DUF3390) 386 468 2.7E-13 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 Pfam PF13183 4Fe-4S dicluster domain 310 377 1.5E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 20 454 3.4E-209 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 Pfam PF02589 LUD domain 73 295 3.2E-49 T 14-10-2018 IPR003741 LUD domain DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 Gene3D G3DSA:1.10.1060.10 308 392 2.7E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_07175 2aa639b78afbceb907faffa1087740b2 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_02845 2dcf883dbf63729f78633a99fb1d4516 304 Pfam PF03466 LysR substrate binding domain 88 293 5.6E-18 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_02845 2dcf883dbf63729f78633a99fb1d4516 304 SUPERFAMILY SSF46785 3 84 1.09E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_02845 2dcf883dbf63729f78633a99fb1d4516 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_02845 2dcf883dbf63729f78633a99fb1d4516 304 Gene3D G3DSA:3.40.190.290 91 292 7.0E-32 T 14-10-2018 DDU33_02845 2dcf883dbf63729f78633a99fb1d4516 304 SUPERFAMILY SSF53850 90 295 5.97E-25 T 14-10-2018 DDU33_02845 2dcf883dbf63729f78633a99fb1d4516 304 Gene3D G3DSA:1.10.10.10 1 85 2.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 Pfam PF00588 SpoU rRNA Methylase family 96 237 3.6E-40 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 243 2.6E-90 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 SUPERFAMILY SSF75217 70 243 9.81E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 6.2E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 SUPERFAMILY SSF55315 2 75 1.65E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 244 43.921 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 Gene3D G3DSA:3.30.1330.30 1 76 4.2E-28 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 Gene3D G3DSA:3.40.1280.10 77 243 2.1E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDU33_05230 cd00948d073e8f5329320f6e16ec4b43 246 SMART SM00967 4 80 2.7E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 SMART SM00387 347 460 4.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 304 2.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 457 1.5E-121 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 SUPERFAMILY SSF47384 223 305 3.73E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 456 2.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 SMART SM00388 238 304 1.9E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 SMART SM00304 184 237 9.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 Gene3D G3DSA:1.10.287.130 188 305 3.9E-18 T 14-10-2018 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 Gene3D G3DSA:3.30.565.10 309 460 8.4E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 SUPERFAMILY SSF55874 293 457 3.27E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 4.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_08110 acdcd9dc39fbb30fc6c5dd419873916c 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 4.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 SUPERFAMILY SSF51569 1 287 2.2E-75 T 14-10-2018 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 6.3E-106 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 4 291 2.2E-154 T 14-10-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 SMART SM01130 3 291 1.4E-72 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 4 292 50.542 T 14-10-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 PIRSF PIRSF001365 1 292 1.5E-63 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 3.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 3.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 3.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 3.8E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_07380 9d6744a0378e0afd5fb42a0cde5f9843 292 Gene3D G3DSA:3.20.20.70 1 292 2.5E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 Gene3D G3DSA:3.30.390.30 346 467 8.5E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PIRSF PIRSF000350 1 469 5.8E-86 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 Gene3D G3DSA:3.50.50.60 151 271 1.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 9.5E-150 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.3E-68 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 9.9E-34 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 Gene3D G3DSA:3.50.50.60 9 332 1.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 2.8E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 SUPERFAMILY SSF51905 7 381 2.28E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 SUPERFAMILY SSF55424 343 466 3.95E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.7E-41 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 3.7E-41 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.7E-41 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.7E-41 T 14-10-2018 DDU33_08820 db5e6abcdff4ab41a4169f73ec856e27 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.7E-41 T 14-10-2018 DDU33_10340 dd4e90cdb29b55b0d4e6539be3dff613 267 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DDU33_10340 dd4e90cdb29b55b0d4e6539be3dff613 267 Gene3D G3DSA:3.60.10.10 1 267 1.9E-82 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DDU33_10340 dd4e90cdb29b55b0d4e6539be3dff613 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 259 4.3E-23 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DDU33_10340 dd4e90cdb29b55b0d4e6539be3dff613 267 SUPERFAMILY SSF56219 1 267 1.28E-86 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DDU33_10340 dd4e90cdb29b55b0d4e6539be3dff613 267 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 2.8E-106 T 14-10-2018 DDU33_10340 dd4e90cdb29b55b0d4e6539be3dff613 267 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 DDU33_10340 dd4e90cdb29b55b0d4e6539be3dff613 267 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 3.1E-94 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DDU33_08130 de3b4505b3d9ff4aad01d58585b0b5b7 151 SUPERFAMILY SSF52833 26 101 8.66E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_08130 de3b4505b3d9ff4aad01d58585b0b5b7 151 Pfam PF04214 Protein of unknown function, DUF 53 120 5.2E-29 T 14-10-2018 IPR007332 Protein of unknown function DUF411 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 Gene3D G3DSA:3.40.50.880 8 204 1.9E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 SUPERFAMILY SSF52317 6 235 8.52E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 Pfam PF02540 NAD synthase 220 285 1.8E-6 T 14-10-2018 IPR022310 NAD/GMP synthase DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 SUPERFAMILY SSF52402 192 444 8.16E-57 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 Pfam PF00958 GMP synthase C terminal domain 431 522 9.1E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 523 3.2E-153 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 203 1.9E-82 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 Gene3D G3DSA:3.40.50.620 207 403 3.6E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 523 55.517 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 Pfam PF00117 Glutamine amidotransferase class-I 11 198 1.2E-40 T 14-10-2018 IPR017926 Glutamine amidotransferase DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.6E-6 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00097 Anthranilate synthase component II signature 175 188 1.6E-6 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00097 Anthranilate synthase component II signature 80 91 1.6E-6 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.1E-7 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.1E-7 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.1E-7 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 5.3E-6 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 5.3E-6 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 5.3E-6 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 Gene3D G3DSA:3.30.300.10 404 523 6.8E-50 T 14-10-2018 DDU33_08795 eb2654dcb1f3cb8a1444a1be366b70fc 523 SUPERFAMILY SSF54810 403 523 3.4E-50 T 14-10-2018 DDU33_03435 0ac635456787d34d6b92fead3152f246 143 SUPERFAMILY SSF102546 1 141 5.75E-43 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDU33_03435 0ac635456787d34d6b92fead3152f246 143 Pfam PF05025 RbsD / FucU transport protein family 3 141 1.3E-38 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDU33_03435 0ac635456787d34d6b92fead3152f246 143 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 142 45.204 T 14-10-2018 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 DDU33_03435 0ac635456787d34d6b92fead3152f246 143 Gene3D G3DSA:3.40.1650.10 1 143 7.2E-51 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.30.1300.30 2538 2637 1.7E-34 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101999 2175 2299 9.02E-9 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101967 193 381 1.31E-30 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:1.20.5.170 894 936 1.3E-10 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 2198 2301 5.3E-18 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 1179 1292 1.0E-23 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 1847 1948 2.1E-18 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 1498 1599 1.1E-19 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:2.150.10.10 687 746 7.1E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:2.150.10.10 48 182 5.9E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:2.150.10.10 604 686 1.0E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101999 1824 1950 2.09E-8 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 2302 2400 2.7E-5 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 1600 1695 6.2E-6 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 2401 2490 3.5E-5 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:3.90.1780.10 1949 2046 2.0E-6 T 14-10-2018 IPR037174 Trimeric adhesin DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF03895 YadA-like membrane anchor domain 2577 2637 1.6E-22 T 14-10-2018 IPR005594 YadA-like, C-terminal DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.6E-10 T 14-10-2018 IPR024973 ESPR domain DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101967 750 913 5.1E-27 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF54523 2537 2637 2.82E-29 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101967 614 742 7.45E-15 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF05658 Head domain of trimeric autotransporter adhesin 248 272 9.9E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF05658 Head domain of trimeric autotransporter adhesin 751 774 2.7E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF05658 Head domain of trimeric autotransporter adhesin 778 804 8.0E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF05658 Head domain of trimeric autotransporter adhesin 77 99 1.4E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF05658 Head domain of trimeric autotransporter adhesin 263 288 8.0E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Pfam PF05658 Head domain of trimeric autotransporter adhesin 220 246 1.5E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101967 458 610 1.31E-10 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:2.150.10.10 747 893 9.9E-32 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:2.150.10.10 231 363 6.2E-36 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:2.150.10.10 441 539 3.7E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101999 1187 1291 1.57E-11 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101967 52 183 1.14E-12 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 SUPERFAMILY SSF101999 1445 1599 4.58E-8 T 14-10-2018 DDU33_05165 0454484557c59ea5429c100a5af9bbc7 2637 Gene3D G3DSA:1.20.5.170 364 386 1.4E-8 T 14-10-2018 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 SUPERFAMILY SSF50249 2 125 2.16E-48 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_03550 b6aaac3175283182306ecadbeb319124 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 116 7.2E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 PIRSF PIRSF002158 12 273 5.2E-101 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 Gene3D G3DSA:2.30.30.30 115 195 2.1E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.982 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 5.1E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 Gene3D G3DSA:4.10.950.10 196 273 3.4E-35 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 SMART SM01383 42 118 5.7E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 SUPERFAMILY SSF50104 126 269 4.45E-60 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DDU33_03550 b6aaac3175283182306ecadbeb319124 273 Gene3D G3DSA:2.40.50.140 1 114 1.8E-48 T 14-10-2018 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 SMART SM01382 124 251 2.6E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DDU33_03550 b6aaac3175283182306ecadbeb319124 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 6.9E-131 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 SUPERFAMILY SSF46946 2 114 2.74E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.083 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 Gene3D G3DSA:1.10.8.50 1 71 3.1E-28 T 14-10-2018 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 PIRSF PIRSF002134 1 118 7.0E-42 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.2E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02105 6817b7180351fd53e84f81a4488fa329 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.0E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 SUPERFAMILY SSF52283 2 135 9.57E-46 T 14-10-2018 DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 Gene3D G3DSA:3.40.50.720 2 316 3.1E-138 T 14-10-2018 DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.1E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 Gene3D G3DSA:3.40.50.720 102 297 3.1E-138 T 14-10-2018 DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 328 3.0E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DDU33_03740 3a8450a6cb9cff3b25a0ce90a6fc49ee 329 SUPERFAMILY SSF51735 102 298 2.78E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 177 8.0E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 Pfam PF04542 Sigma-70 region 2 13 76 9.1E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 SUPERFAMILY SSF88659 115 178 6.35E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 SUPERFAMILY SSF88946 11 90 4.87E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 Pfam PF08281 Sigma-70, region 4 124 174 2.5E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 Gene3D G3DSA:1.10.1740.10 7 98 9.0E-19 T 14-10-2018 DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 Gene3D G3DSA:1.10.10.10 117 180 1.9E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_00695 56aa7b14efe9eeb93e09645270ddbcb2 182 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 5 181 1.2E-65 T 14-10-2018 IPR014289 RNA polymerase sigma-24-related DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 Gene3D G3DSA:2.60.40.1250 26 157 1.3E-38 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 Gene3D G3DSA:3.40.30.10 455 586 8.9E-35 T 14-10-2018 DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 SUPERFAMILY SSF52833 466 578 4.19E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 ProSitePatterns PS00194 Thioredoxin family active site. 488 506 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 6 580 36.199 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 Pfam PF13899 Thioredoxin-like 479 552 7.8E-13 T 14-10-2018 DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 SUPERFAMILY SSF74863 30 141 3.14E-35 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 188 393 3.7E-18 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DDU33_05175 9ffbcceec02949aeefda22e0980eb722 587 Pfam PF11412 Disulphide bond corrector protein DsbC 31 139 1.4E-32 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 SUPERFAMILY SSF50249 9 150 7.93E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 SUPERFAMILY SSF55681 158 498 4.58E-121 T 14-10-2018 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 7.0E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 7.0E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 7.0E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 7.0E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 7.0E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 Gene3D G3DSA:2.40.50.140 12 150 2.7E-43 T 14-10-2018 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 PIRSF PIRSF039101 2 501 2.9E-198 T 14-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 Pfam PF01336 OB-fold nucleic acid binding domain 64 142 1.6E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 500 44.454 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 158 497 4.7E-80 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 Gene3D G3DSA:3.30.930.10 151 497 2.0E-129 T 14-10-2018 DDU33_09995 e1a86e1b9e7554d3d9925933d99ba7b0 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 11 499 5.0E-225 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 Gene3D G3DSA:3.40.630.10 87 427 5.1E-104 T 14-10-2018 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 103 420 2.3E-101 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 PIRSF PIRSF036388 1 427 3.7E-220 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 274 281 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 SUPERFAMILY SSF53187 98 425 3.45E-99 T 14-10-2018 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 Pfam PF12404 Peptidase 1 74 1.1E-30 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 PRINTS PR00481 Cytosol aminopeptidase signature 270 290 3.6E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 PRINTS PR00481 Cytosol aminopeptidase signature 189 206 3.6E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 PRINTS PR00481 Cytosol aminopeptidase signature 211 232 3.6E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 PRINTS PR00481 Cytosol aminopeptidase signature 298 313 3.6E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_09900 93e35e86a226a336cd79f68fc9d4eea9 427 PRINTS PR00481 Cytosol aminopeptidase signature 248 269 3.6E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 3 202 37.629 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 SUPERFAMILY SSF101386 113 201 6.76E-25 T 14-10-2018 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 Gene3D G3DSA:3.10.20.400 1 92 1.9E-34 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 28 101 4.0E-32 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 Gene3D G3DSA:1.10.287.1080 111 203 1.7E-30 T 14-10-2018 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 51 101 1.0E-23 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 111 197 19.491 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 115 201 5.5E-18 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 SUPERFAMILY SSF141734 3 109 3.53E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DDU33_00280 22f5051987df5ffa2fe578570f5b6825 213 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 3.3E-32 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 11 169 1.8E-41 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 Gene3D G3DSA:3.30.70.20 41 105 3.5E-10 T 14-10-2018 DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 39 174 22.037 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 154 165 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 Gene3D G3DSA:3.30.70.20 109 172 1.8E-9 T 14-10-2018 DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 Pfam PF12838 4Fe-4S dicluster domain 121 168 1.8E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 Pfam PF12838 4Fe-4S dicluster domain 49 94 2.8E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01020 935e0b3ad5bda3755242d9607054ec17 174 SUPERFAMILY SSF54862 44 171 5.02E-20 T 14-10-2018 DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 225 1.4E-98 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 55 63 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 Pfam PF13183 4Fe-4S dicluster domain 142 215 3.9E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 Gene3D G3DSA:1.10.1060.10 104 240 1.9E-48 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 108 4.1E-35 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 SUPERFAMILY SSF54292 3 103 3.09E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 Gene3D G3DSA:3.10.20.30 1 103 1.1E-37 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 SUPERFAMILY SSF46548 105 224 8.2E-28 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_02600 7c9dee75c252c0a29407d10ee502566f 241 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Pfam PF01612 3'-5' exonuclease 332 538 8.3E-41 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 TIGRFAM TIGR00593 pola: DNA polymerase I 9 950 2.6E-295 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SUPERFAMILY SSF47807 171 292 3.29E-30 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SUPERFAMILY SSF88723 6 170 1.68E-56 T 14-10-2018 IPR029060 PIN-like domain superfamily DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SUPERFAMILY SSF53098 335 540 4.23E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Gene3D G3DSA:3.30.70.370 687 946 2.2E-115 T 14-10-2018 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SMART SM00482 709 914 1.2E-116 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 716 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 777 802 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 897 910 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 700 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 746 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 884 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 766 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 836 847 1.5E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Gene3D G3DSA:1.10.150.20 174 253 6.1E-97 T 14-10-2018 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Gene3D G3DSA:3.40.50.1010 9 284 6.1E-97 T 14-10-2018 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Gene3D G3DSA:3.30.420.10 329 564 1.6E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Gene3D G3DSA:1.20.1060.10 565 681 9.7E-41 T 14-10-2018 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SUPERFAMILY SSF56672 544 950 2.56E-158 T 14-10-2018 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Gene3D G3DSA:1.10.150.20 732 875 2.2E-115 T 14-10-2018 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.0E-55 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SMART SM00279 173 208 2.7E-14 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SMART SM00475 7 268 8.2E-137 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 8.8E-29 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 ProSitePatterns PS00447 DNA polymerase family A signature. 777 796 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 Pfam PF00476 DNA polymerase family A 573 948 3.3E-158 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09775 2f533e2630e0eca587e6c836e594d287 950 SMART SM00474 332 539 4.6E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 265 3.0E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 Gene3D G3DSA:1.10.530.10 283 469 3.1E-30 T 14-10-2018 DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 308 336 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 SMART SM00062 44 267 3.5E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 Gene3D G3DSA:3.40.190.10 129 223 9.9E-52 T 14-10-2018 DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 Gene3D G3DSA:3.40.190.10 39 262 9.9E-52 T 14-10-2018 DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 Pfam PF01464 Transglycosylase SLT domain 296 399 2.5E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 SUPERFAMILY SSF53955 244 448 3.83E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 474 45.954 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 DDU33_04725 b06d7f877aa09f5bf8ca8af1c27d0e80 498 SUPERFAMILY SSF53850 45 266 8.58E-32 T 14-10-2018 DDU33_06270 3541cf5cbc808fb49d1d10ec9f2ba9f4 438 Gene3D G3DSA:2.30.42.10 216 297 4.7E-12 T 14-10-2018 DDU33_06270 3541cf5cbc808fb49d1d10ec9f2ba9f4 438 Pfam PF02163 Peptidase family M50 6 426 9.7E-82 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DDU33_06270 3541cf5cbc808fb49d1d10ec9f2ba9f4 438 SMART SM00228 205 271 2.1E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_06270 3541cf5cbc808fb49d1d10ec9f2ba9f4 438 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 436 3.9E-117 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DDU33_06270 3541cf5cbc808fb49d1d10ec9f2ba9f4 438 SUPERFAMILY SSF50156 86 166 2.37E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DDU33_06270 3541cf5cbc808fb49d1d10ec9f2ba9f4 438 SUPERFAMILY SSF50156 188 273 7.14E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DDU33_06270 3541cf5cbc808fb49d1d10ec9f2ba9f4 438 Gene3D G3DSA:2.30.42.10 120 213 1.4E-25 T 14-10-2018 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 9.2E-13 T 14-10-2018 IPR004176 Clp, N-terminal DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.3E-11 T 14-10-2018 IPR004176 Clp, N-terminal DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Gene3D G3DSA:1.10.1780.10 1 146 2.3E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 SMART SM01086 765 854 5.9E-39 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 SUPERFAMILY SSF52540 157 545 5.93E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Gene3D G3DSA:3.40.50.300 550 763 1.3E-88 T 14-10-2018 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 SUPERFAMILY SSF81923 4 154 2.88E-41 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Gene3D G3DSA:3.40.50.300 147 340 9.9E-76 T 14-10-2018 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 5.2E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 SUPERFAMILY SSF52540 546 849 2.81E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 2.4E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 9.8E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Gene3D G3DSA:3.40.50.300 341 544 2.2E-67 T 14-10-2018 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 Gene3D G3DSA:1.10.8.60 765 857 6.3E-27 T 14-10-2018 DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 SMART SM00382 196 342 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_05465 c3b12063dd6cd2ad7244f66bfd6f7d14 857 SMART SM00382 597 745 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_02530 de2351460911fc3a50c9440bc9b79db4 216 SUPERFAMILY SSF52540 2 213 6.05E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02530 de2351460911fc3a50c9440bc9b79db4 216 Pfam PF00005 ABC transporter 21 149 1.1E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_02530 de2351460911fc3a50c9440bc9b79db4 216 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_02530 de2351460911fc3a50c9440bc9b79db4 216 SMART SM00382 30 204 1.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_02530 de2351460911fc3a50c9440bc9b79db4 216 Gene3D G3DSA:3.40.50.300 1 215 5.6E-41 T 14-10-2018 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 SUPERFAMILY SSF55186 63 241 2.35E-64 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Pfam PF03129 Anticodon binding domain 541 630 1.9E-21 T 14-10-2018 IPR004154 Anticodon-binding DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 5.0E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Gene3D G3DSA:3.30.980.10 69 222 1.2E-62 T 14-10-2018 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Gene3D G3DSA:3.30.54.20 130 187 1.2E-62 T 14-10-2018 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Gene3D G3DSA:3.10.20.30 3 62 2.8E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Gene3D G3DSA:3.40.50.800 532 639 5.5E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 SUPERFAMILY SSF55681 243 525 3.19E-96 T 14-10-2018 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Gene3D G3DSA:3.30.930.10 223 531 4.0E-130 T 14-10-2018 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 5.0E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 SUPERFAMILY SSF81271 3 61 3.6E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 2.1E-246 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 SUPERFAMILY SSF52954 529 636 4.68E-32 T 14-10-2018 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.074 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 Pfam PF02824 TGS domain 4 61 1.0E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DDU33_06255 b1395b1440617852f773aa38fa1e05dd 643 SMART SM00863 170 219 2.3E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DDU33_04135 f3095fdeebe0fd11d1641109929f92bb 502 Pfam PF00474 Sodium:solute symporter family 35 441 1.5E-134 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DDU33_04135 f3095fdeebe0fd11d1641109929f92bb 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site DDU33_04135 f3095fdeebe0fd11d1641109929f92bb 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 8 495 7.3E-210 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 DDU33_04135 f3095fdeebe0fd11d1641109929f92bb 502 Gene3D G3DSA:1.20.1730.10 10 501 8.3E-99 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DDU33_04135 f3095fdeebe0fd11d1641109929f92bb 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 423 443 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site DDU33_04135 f3095fdeebe0fd11d1641109929f92bb 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 441 3.7E-120 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 SUPERFAMILY SSF56042 141 302 1.5E-38 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 318 27.797 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 PIRSF PIRSF005303 1 318 2.1E-89 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 Gene3D G3DSA:3.30.1330.10 1 141 2.1E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 318 3.4E-108 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 SUPERFAMILY SSF55326 1 135 3.66E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 Gene3D G3DSA:3.90.650.10 142 318 6.9E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 295 3.4E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DDU33_06190 0c576b1ad5c46083b1843984298f92cd 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 134 1.0E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DDU33_04365 739ce13d4e5e61ee88617b0dcd091b97 203 SUPERFAMILY SSF54534 4 139 2.75E-32 T 14-10-2018 DDU33_04365 739ce13d4e5e61ee88617b0dcd091b97 203 Gene3D G3DSA:3.10.50.40 3 154 4.6E-56 T 14-10-2018 DDU33_04365 739ce13d4e5e61ee88617b0dcd091b97 203 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 10 136 4.1E-10 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDU33_04365 739ce13d4e5e61ee88617b0dcd091b97 203 Gene3D G3DSA:2.40.10.330 71 121 4.6E-56 T 14-10-2018 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 SUPERFAMILY SSF52096 324 530 6.32E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 Gene3D G3DSA:3.40.1750.10 186 498 4.0E-150 T 14-10-2018 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 Pfam PF01343 Peptidase family S49 392 537 3.1E-43 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 Pfam PF01343 Peptidase family S49 138 289 6.6E-28 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 PIRSF PIRSF001217 1 622 2.5E-198 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 13 613 3.8E-185 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 Gene3D G3DSA:3.90.226.10 315 535 4.0E-150 T 14-10-2018 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 Gene3D G3DSA:3.90.226.10 95 314 4.0E-150 T 14-10-2018 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 537 1.5E-52 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 DDU33_00220 51c734a65bae9e0612d55940bfcc030a 622 SUPERFAMILY SSF52096 53 283 5.47E-21 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_06250 6f73bfb1dd19f022c5d697f441197c7e 345 Pfam PF04143 Sulphur transport 21 331 1.4E-89 T 14-10-2018 IPR007272 Sulphur transport domain DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 PIRSF PIRSF001435 1 210 4.7E-56 T 14-10-2018 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 Gene3D G3DSA:1.10.340.30 21 132 3.1E-80 T 14-10-2018 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 6.9E-22 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 Gene3D G3DSA:1.10.1670.10 11 203 3.1E-80 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.489 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.3E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 TIGRFAM TIGR01083 nth: endonuclease III 3 194 4.4E-92 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 SMART SM00478 38 185 8.0E-60 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 SUPERFAMILY SSF48150 2 208 4.4E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DDU33_09285 b033045dc65fa07f9de111cd8b4bf2fd 211 SMART SM00525 186 206 1.4E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SUPERFAMILY SSF50249 619 697 4.7E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 690 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 319 1.7E-23 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 2.0E-17 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 5.7E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SUPERFAMILY SSF54211 297 467 2.43E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SUPERFAMILY SSF54211 4 143 2.23E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Pfam PF00013 KH domain 555 613 2.9E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SUPERFAMILY SSF55666 144 234 4.58E-30 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SUPERFAMILY SSF46915 238 319 3.66E-19 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Gene3D G3DSA:3.30.230.70 2 228 1.1E-78 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Pfam PF00575 S1 RNA binding domain 618 689 2.5E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 PIRSF PIRSF005499 1 711 1.8E-299 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Pfam PF03725 3' exoribonuclease family, domain 2 459 526 1.6E-5 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 1.8E-15 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SUPERFAMILY SSF54791 553 638 1.18E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SMART SM00316 619 689 1.6E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Gene3D G3DSA:2.40.50.140 620 693 1.8E-28 T 14-10-2018 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.467 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SUPERFAMILY SSF55666 449 548 5.61E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 SMART SM00322 551 616 2.1E-14 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Gene3D G3DSA:3.30.1370.10 549 619 2.2E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DDU33_07415 fd326e39ad3ec5ebff06a8af17cb8d68 711 Gene3D G3DSA:3.30.230.70 232 548 1.1E-117 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DDU33_02625 593850a20d16fac637a060d8bf02a5cc 175 Pfam PF12724 Flavodoxin domain 4 152 6.0E-50 T 14-10-2018 IPR026816 Flavodoxin domain DDU33_02625 593850a20d16fac637a060d8bf02a5cc 175 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DDU33_02625 593850a20d16fac637a060d8bf02a5cc 175 Gene3D G3DSA:3.40.50.360 1 122 3.0E-14 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_02625 593850a20d16fac637a060d8bf02a5cc 175 SUPERFAMILY SSF52218 2 168 7.69E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 Gene3D G3DSA:3.40.50.1980 89 258 2.5E-48 T 14-10-2018 DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 Gene3D G3DSA:3.40.50.1980 1 61 1.3E-7 T 14-10-2018 DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 238 251 4.6E-14 T 14-10-2018 DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 15 33 4.6E-14 T 14-10-2018 DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 46 61 4.6E-14 T 14-10-2018 DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 150 165 4.6E-14 T 14-10-2018 DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 174 192 4.6E-14 T 14-10-2018 DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 Pfam PF01497 Periplasmic binding protein 1 225 2.9E-16 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DDU33_05875 6c5792c146e70f4ec8b387037cf7f7f3 264 SUPERFAMILY SSF53807 1 257 8.63E-42 T 14-10-2018 DDU33_01305 6d9250d8cd66ae98f978c7454ee4247a 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 101 5.0E-16 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DDU33_01305 6d9250d8cd66ae98f978c7454ee4247a 106 Pfam PF04999 Cell division protein FtsL 9 103 5.2E-25 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DDU33_01305 6d9250d8cd66ae98f978c7454ee4247a 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 102 12.828 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DDU33_02805 bdcc2fd5ad4d69c2be9356c04e3f9e2c 84 SUPERFAMILY SSF143120 10 72 4.71E-5 T 14-10-2018 IPR036165 YefM-like superfamily DDU33_02805 bdcc2fd5ad4d69c2be9356c04e3f9e2c 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 78 3.6E-6 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DDU33_08135 fbd429066ba4838d889129b793c378d3 515 Pfam PF07731 Multicopper oxidase 399 514 3.7E-28 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DDU33_08135 fbd429066ba4838d889129b793c378d3 515 Gene3D G3DSA:2.60.40.420 194 355 4.9E-47 T 14-10-2018 IPR008972 Cupredoxin DDU33_08135 fbd429066ba4838d889129b793c378d3 515 ProSitePatterns PS00080 Multicopper oxidases signature 2. 497 508 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DDU33_08135 fbd429066ba4838d889129b793c378d3 515 Gene3D G3DSA:2.60.40.420 364 515 2.8E-39 T 14-10-2018 IPR008972 Cupredoxin DDU33_08135 fbd429066ba4838d889129b793c378d3 515 SUPERFAMILY SSF49503 67 197 1.15E-35 T 14-10-2018 IPR008972 Cupredoxin DDU33_08135 fbd429066ba4838d889129b793c378d3 515 SUPERFAMILY SSF49503 201 308 1.83E-16 T 14-10-2018 IPR008972 Cupredoxin DDU33_08135 fbd429066ba4838d889129b793c378d3 515 Pfam PF07732 Multicopper oxidase 81 196 2.7E-35 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DDU33_08135 fbd429066ba4838d889129b793c378d3 515 SUPERFAMILY SSF49503 399 514 9.87E-32 T 14-10-2018 IPR008972 Cupredoxin DDU33_08135 fbd429066ba4838d889129b793c378d3 515 Pfam PF00394 Multicopper oxidase 228 311 2.6E-5 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DDU33_08135 fbd429066ba4838d889129b793c378d3 515 Gene3D G3DSA:2.60.40.420 26 192 2.5E-48 T 14-10-2018 IPR008972 Cupredoxin DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 Gene3D G3DSA:3.40.50.300 4 279 1.0E-69 T 14-10-2018 DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 SUPERFAMILY SSF52540 4 245 8.53E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 Pfam PF00005 ABC transporter 19 185 3.8E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 SUPERFAMILY SSF52540 307 516 7.08E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 SMART SM00382 28 230 8.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 SMART SM00382 344 515 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 Pfam PF16326 ABC transporter C-terminal domain 572 640 2.4E-18 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 Gene3D G3DSA:3.40.50.300 281 552 4.2E-64 T 14-10-2018 DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 Pfam PF12848 ABC transporter 224 297 7.9E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 Pfam PF00005 ABC transporter 335 469 3.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_06945 769a14997d7e8eeccee7fc4d398507b2 647 Gene3D G3DSA:1.10.287.380 562 646 1.4E-25 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 SUPERFAMILY SSF51735 320 502 4.54E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 Gene3D G3DSA:3.90.226.10 11 318 3.0E-59 T 14-10-2018 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 SUPERFAMILY SSF48179 503 605 7.48E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 208 1.1E-28 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 Gene3D G3DSA:3.40.50.720 319 506 1.6E-51 T 14-10-2018 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 501 526 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 504 597 4.6E-17 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 322 501 1.2E-47 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 Gene3D G3DSA:1.10.1040.50 507 709 1.4E-57 T 14-10-2018 DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 SUPERFAMILY SSF52096 12 311 2.58E-44 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_09840 81576f0a19e2f185c0e3df3d632eba2d 709 SUPERFAMILY SSF48179 624 706 4.17E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 Gene3D G3DSA:3.40.50.300 454 588 1.8E-10 T 14-10-2018 DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 SMART SM00487 215 449 3.1E-9 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 SUPERFAMILY SSF52540 259 569 4.86E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 SUPERFAMILY SSF109604 21 182 4.39E-8 T 14-10-2018 DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 260 582 1.4E-34 T 14-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 Gene3D G3DSA:1.10.3210.30 12 142 6.8E-9 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 Pfam PF00270 DEAD/DEAH box helicase 261 420 1.4E-10 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 Gene3D G3DSA:3.40.50.300 219 433 5.7E-17 T 14-10-2018 DDU33_05710 371a238bc75f74322bb989a162bd0dd2 758 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 23 183 1.7E-24 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 Pfam PF00425 chorismate binding enzyme 240 500 2.6E-82 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 Gene3D G3DSA:3.60.120.10 1 513 3.8E-161 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 193 3.9E-14 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 12 512 4.3E-234 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 SUPERFAMILY SSF56322 7 509 3.53E-148 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 PIRSF PIRSF001373 1 514 1.5E-236 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 PRINTS PR00095 Anthranilate synthase component I signature 348 361 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 PRINTS PR00095 Anthranilate synthase component I signature 457 471 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 PRINTS PR00095 Anthranilate synthase component I signature 442 456 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_05585 e46d1d42dc6214e70cceb65db20997c8 514 PRINTS PR00095 Anthranilate synthase component I signature 362 375 1.1E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_00440 0dbdb7b3a3b6ec947eb1471fe9dfebfc 425 Gene3D G3DSA:3.65.10.10 21 230 7.0E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DDU33_00440 0dbdb7b3a3b6ec947eb1471fe9dfebfc 425 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 8.3E-184 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_00440 0dbdb7b3a3b6ec947eb1471fe9dfebfc 425 SUPERFAMILY SSF55205 1 419 7.52E-146 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DDU33_00440 0dbdb7b3a3b6ec947eb1471fe9dfebfc 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 7.6E-123 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDU33_00440 0dbdb7b3a3b6ec947eb1471fe9dfebfc 425 Gene3D G3DSA:3.65.10.10 10 415 7.0E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DDU33_00440 0dbdb7b3a3b6ec947eb1471fe9dfebfc 425 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 43.606 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_06280 53b6814613bd8ac7bc6ff750ed4a69ae 284 SUPERFAMILY SSF111384 22 126 2.09E-8 T 14-10-2018 DDU33_06280 53b6814613bd8ac7bc6ff750ed4a69ae 284 Gene3D G3DSA:3.30.910.20 15 108 2.4E-6 T 14-10-2018 IPR024930 Skp domain superfamily DDU33_06280 53b6814613bd8ac7bc6ff750ed4a69ae 284 Pfam PF03938 Outer membrane protein (OmpH-like) 10 107 2.5E-9 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DDU33_06280 53b6814613bd8ac7bc6ff750ed4a69ae 284 Pfam PF03938 Outer membrane protein (OmpH-like) 99 225 1.2E-13 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DDU33_06280 53b6814613bd8ac7bc6ff750ed4a69ae 284 SUPERFAMILY SSF111384 116 226 4.18E-14 T 14-10-2018 DDU33_06280 53b6814613bd8ac7bc6ff750ed4a69ae 284 SMART SM00935 10 227 5.4E-22 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DDU33_06280 53b6814613bd8ac7bc6ff750ed4a69ae 284 Gene3D G3DSA:3.30.910.20 111 227 6.4E-11 T 14-10-2018 IPR024930 Skp domain superfamily DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 SUPERFAMILY SSF53623 101 317 1.83E-50 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 SUPERFAMILY SSF63418 1 95 2.88E-26 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 Gene3D G3DSA:3.40.1190.10 82 318 2.3E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 399 6.4E-16 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 457 32.044 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 456 3.1E-139 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 Pfam PF01225 Mur ligase family, catalytic domain 25 93 7.6E-9 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 Gene3D G3DSA:3.40.1390.10 1 81 8.9E-25 T 14-10-2018 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 Gene3D G3DSA:3.90.190.20 320 460 7.1E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 Pfam PF08245 Mur ligase middle domain 107 301 8.6E-45 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DDU33_01285 f48e95b75271b119a6a50d14e2e7a259 464 SUPERFAMILY SSF53244 321 456 1.98E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 SUPERFAMILY SSF54211 302 497 1.71E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 304 320 1.3E-6 T 14-10-2018 DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 417 436 1.3E-6 T 14-10-2018 DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 387 406 1.3E-6 T 14-10-2018 DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 Gene3D G3DSA:3.30.230.10 280 518 7.5E-83 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 Pfam PF13654 AAA domain 68 266 1.4E-18 T 14-10-2018 DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 390 495 1.7E-7 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DDU33_04090 caf23bba3accabe68dfc077e08fb364a 545 Gene3D G3DSA:3.40.50.300 25 187 8.1E-12 T 14-10-2018 DDU33_02145 8265964d9f3aaa714fbcef171dec2d6a 130 Pfam PF00410 Ribosomal protein S8 5 129 4.5E-48 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02145 8265964d9f3aaa714fbcef171dec2d6a 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02145 8265964d9f3aaa714fbcef171dec2d6a 130 Gene3D G3DSA:3.30.1490.10 73 130 3.1E-25 T 14-10-2018 DDU33_02145 8265964d9f3aaa714fbcef171dec2d6a 130 Gene3D G3DSA:3.30.1370.30 2 72 6.6E-27 T 14-10-2018 DDU33_02145 8265964d9f3aaa714fbcef171dec2d6a 130 SUPERFAMILY SSF56047 2 129 2.09E-46 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02145 8265964d9f3aaa714fbcef171dec2d6a 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 32.049 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 1883 2003 7.2E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 2270 2389 6.7E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 1153 1272 2.4E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 1523 1640 3.1E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 521 631 1.6E-31 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 3405 3533 1.6E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 1526 1642 3.53E-7 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 2247 2269 3.5E-11 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 947 970 2.7E-6 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 3382 3404 2.9E-11 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 2984 3007 1.9E-7 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 1131 1152 1.4E-11 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 1499 1522 2.4E-12 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 822 848 2.9E-11 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 1861 1882 2.3E-10 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF03895 YadA-like membrane anchor domain 3561 3619 5.4E-17 T 14-10-2018 IPR005594 YadA-like, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF54523 3519 3619 5.02E-26 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 2878 3003 3.27E-10 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 429 630 3.79E-35 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.20.25.490 2004 2056 7.6E-15 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.20.25.490 1641 1694 1.2E-13 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.20.25.490 2689 2745 3.9E-15 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.20.25.490 1273 1326 7.4E-13 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.20.25.490 2390 2442 3.7E-15 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101999 2209 2317 2.75E-5 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 745 843 2.09E-7 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 1888 2004 5.36E-7 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 178 431 8.5E-9 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 3278 3403 4.45E-11 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 603 646 7.3E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1251 1292 4.0E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1124 1162 2.1E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2670 2711 9.7E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2367 2408 9.7E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 3376 3420 3.9E-12 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1493 1531 1.2E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 3093 3134 4.8E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 3508 3547 1.1E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1854 1892 5.3E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1981 2022 3.6E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 816 853 3.4E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2978 3018 1.5E-8 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 941 984 6.9E-8 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1619 1660 2.2E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2240 2278 2.6E-12 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 2272 2390 4.84E-7 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 1090 1129 7.2E-16 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 1459 1498 2.7E-12 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 1816 1859 6.8E-8 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 2944 2982 3.9E-16 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 906 945 6.0E-15 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 3059 3097 4.1E-16 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 3343 3381 8.4E-18 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 783 821 6.0E-14 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.390.90 2202 2245 6.8E-8 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 6.8E-10 T 14-10-2018 IPR024973 ESPR domain DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:3.30.1300.30 3542 3619 5.1E-26 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 315 420 2.5E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 128 265 4.6E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:2.150.10.10 421 520 1.4E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 1158 1274 1.18E-7 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Gene3D G3DSA:1.20.5.170 3099 3151 2.2E-7 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 3031 3118 2.62E-9 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 852 966 5.1E-9 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 3426 3531 2.48E-8 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 SUPERFAMILY SSF101967 1015 1151 2.62E-5 T 14-10-2018 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05658 Head domain of trimeric autotransporter adhesin 440 461 4.9E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05658 Head domain of trimeric autotransporter adhesin 449 475 5.8E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05658 Head domain of trimeric autotransporter adhesin 351 377 2.7E-6 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05658 Head domain of trimeric autotransporter adhesin 380 405 3.6E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05658 Head domain of trimeric autotransporter adhesin 276 301 4.0E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05965 8d1d4fda1736d04e4241309f7a6ad93c 3619 Pfam PF05658 Head domain of trimeric autotransporter adhesin 538 563 1.3E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Pfam PF11798 IMS family HHH motif 170 200 7.0E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Gene3D G3DSA:1.10.150.20 179 233 1.0E-17 T 14-10-2018 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Hamap MF_01113 DNA polymerase IV [dinB]. 5 355 35.903 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Gene3D G3DSA:3.30.1490.100 241 356 2.4E-21 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Gene3D G3DSA:2.30.40.20 25 77 1.4E-64 T 14-10-2018 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 343 9.1E-6 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Pfam PF00817 impB/mucB/samB family 11 158 3.7E-52 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 SUPERFAMILY SSF100879 245 355 1.73E-17 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 Gene3D G3DSA:3.30.70.270 8 168 1.4E-64 T 14-10-2018 DDU33_05815 643443ca622ceedb1ff3ff83c5f3d014 357 SUPERFAMILY SSF56672 5 238 3.11E-94 T 14-10-2018 DDU33_05420 da2e14997eaee6b7cfdfadb926f8b43d 431 Pfam PF00860 Permease family 18 392 1.9E-40 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DDU33_05420 da2e14997eaee6b7cfdfadb926f8b43d 431 PIRSF PIRSF005353 1 431 1.8E-167 T 14-10-2018 IPR026033 Purine permease PbuG-like DDU33_08825 8c784feb503546b476a4af98347198a5 630 Gene3D G3DSA:2.40.50.100 1 79 5.1E-21 T 14-10-2018 DDU33_08825 8c784feb503546b476a4af98347198a5 630 Gene3D G3DSA:2.40.50.100 100 176 6.8E-21 T 14-10-2018 DDU33_08825 8c784feb503546b476a4af98347198a5 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDU33_08825 8c784feb503546b476a4af98347198a5 630 Gene3D G3DSA:2.40.50.100 199 275 3.6E-22 T 14-10-2018 DDU33_08825 8c784feb503546b476a4af98347198a5 630 Pfam PF00364 Biotin-requiring enzyme 200 269 5.7E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DDU33_08825 8c784feb503546b476a4af98347198a5 630 Pfam PF00364 Biotin-requiring enzyme 102 171 1.3E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DDU33_08825 8c784feb503546b476a4af98347198a5 630 Pfam PF00364 Biotin-requiring enzyme 3 74 2.1E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DDU33_08825 8c784feb503546b476a4af98347198a5 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 123 152 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDU33_08825 8c784feb503546b476a4af98347198a5 630 Gene3D G3DSA:4.10.320.10 319 363 9.2E-21 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DDU33_08825 8c784feb503546b476a4af98347198a5 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 187 630 8.3E-210 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 DDU33_08825 8c784feb503546b476a4af98347198a5 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 221 250 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDU33_08825 8c784feb503546b476a4af98347198a5 630 SUPERFAMILY SSF51230 197 290 1.83E-24 T 14-10-2018 IPR011053 Single hybrid motif DDU33_08825 8c784feb503546b476a4af98347198a5 630 Pfam PF02817 e3 binding domain 320 354 2.2E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DDU33_08825 8c784feb503546b476a4af98347198a5 630 SUPERFAMILY SSF51230 2 92 1.44E-21 T 14-10-2018 IPR011053 Single hybrid motif DDU33_08825 8c784feb503546b476a4af98347198a5 630 SUPERFAMILY SSF47005 316 358 1.7E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DDU33_08825 8c784feb503546b476a4af98347198a5 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 8.6E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DDU33_08825 8c784feb503546b476a4af98347198a5 630 SUPERFAMILY SSF51230 99 190 7.85E-23 T 14-10-2018 IPR011053 Single hybrid motif DDU33_08825 8c784feb503546b476a4af98347198a5 630 SUPERFAMILY SSF52777 388 629 5.34E-81 T 14-10-2018 DDU33_08825 8c784feb503546b476a4af98347198a5 630 Gene3D G3DSA:3.30.559.10 384 630 4.7E-99 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 SUPERFAMILY SSF54631 197 332 2.02E-22 T 14-10-2018 DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 Pfam PF03471 Transporter associated domain 343 417 2.1E-17 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 Pfam PF01595 Domain of unknown function DUF21 13 179 6.9E-46 T 14-10-2018 IPR002550 CNNM, transmembrane domain DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 Gene3D G3DSA:3.10.580.10 199 329 7.2E-40 T 14-10-2018 DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 SUPERFAMILY SSF56176 339 417 6.27E-19 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 Gene3D G3DSA:3.30.465.10 339 417 4.4E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 SMART SM01091 341 419 3.6E-23 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_04445 a588c8d7be514adeae14f0ab5a6cd5df 422 Pfam PF00571 CBS domain 277 325 2.1E-4 T 14-10-2018 IPR000644 CBS domain DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 8.6E-29 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 Gene3D G3DSA:3.10.50.30 76 158 5.4E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 2.5E-31 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 SUPERFAMILY SSF46557 3 78 7.06E-29 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 2.2E-59 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 Gene3D G3DSA:1.10.287.180 1 75 2.1E-32 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 SUPERFAMILY SSF54534 81 157 2.49E-24 T 14-10-2018 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.931 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DDU33_09465 b25c5ea309cc54ca8b7206fe33d8b676 158 PIRSF PIRSF006092 1 158 3.9E-54 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DDU33_03110 8423520f7679d6378ee9e531d609d533 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site DDU33_03110 8423520f7679d6378ee9e531d609d533 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 255 8.3E-54 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDU33_03110 8423520f7679d6378ee9e531d609d533 260 SMART SM00062 36 256 5.7E-68 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDU33_03110 8423520f7679d6378ee9e531d609d533 260 SUPERFAMILY SSF53850 1 256 1.36E-57 T 14-10-2018 DDU33_03110 8423520f7679d6378ee9e531d609d533 260 Gene3D G3DSA:3.40.190.10 120 217 9.9E-72 T 14-10-2018 DDU33_03110 8423520f7679d6378ee9e531d609d533 260 Gene3D G3DSA:3.40.190.10 35 248 9.9E-72 T 14-10-2018 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 Gene3D G3DSA:1.25.40.10 186 262 9.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 Gene3D G3DSA:1.25.40.10 39 185 3.8E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 394 33.082 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 SUPERFAMILY SSF48452 39 254 2.09E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 SMART SM00028 221 254 1.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 SMART SM00028 77 109 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 SMART SM00028 149 182 42.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_07595 88bdb220032c19ade912c26d2d01232c 397 Pfam PF13432 Tetratricopeptide repeat 208 253 6.0E-5 T 14-10-2018 DDU33_06590 b832305aa1dca0431c0281b14a0733da 138 SUPERFAMILY SSF55331 2 125 2.7E-29 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DDU33_06590 b832305aa1dca0431c0281b14a0733da 138 Pfam PF14552 Tautomerase enzyme 39 120 1.1E-14 T 14-10-2018 IPR037479 Tautomerase, MSAD family DDU33_06590 b832305aa1dca0431c0281b14a0733da 138 Gene3D G3DSA:3.30.429.10 2 136 1.2E-28 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DDU33_02045 d405a7e130b0832ab7ce66d78c62db25 82 Gene3D G3DSA:3.30.1320.10 1 82 3.3E-29 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02045 d405a7e130b0832ab7ce66d78c62db25 82 Pfam PF00886 Ribosomal protein S16 8 68 5.9E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02045 d405a7e130b0832ab7ce66d78c62db25 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 7.3E-29 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02045 d405a7e130b0832ab7ce66d78c62db25 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.301 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02045 d405a7e130b0832ab7ce66d78c62db25 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02045 d405a7e130b0832ab7ce66d78c62db25 82 SUPERFAMILY SSF54565 1 76 7.19E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 SUPERFAMILY SSF49503 30 172 7.22E-22 T 14-10-2018 IPR008972 Cupredoxin DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 Gene3D G3DSA:2.60.40.420 168 344 2.1E-36 T 14-10-2018 IPR008972 Cupredoxin DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 Pfam PF07732 Multicopper oxidase 58 169 2.1E-22 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 SUPERFAMILY SSF49503 176 289 4.61E-23 T 14-10-2018 IPR008972 Cupredoxin DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 Pfam PF07731 Multicopper oxidase 348 441 8.1E-5 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 SUPERFAMILY SSF49503 359 470 8.55E-11 T 14-10-2018 IPR008972 Cupredoxin DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 Hamap MF_00915 Cell division protein FtsP [ftsP]. 5 471 55.883 T 14-10-2018 IPR026589 Cell division protein FtsP GO:0043093 DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 Gene3D G3DSA:2.60.40.420 31 167 1.0E-29 T 14-10-2018 IPR008972 Cupredoxin DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 Gene3D G3DSA:2.60.40.420 349 472 4.6E-14 T 14-10-2018 IPR008972 Cupredoxin DDU33_03640 c12831ebac2d94dd241e68aca0c04337 472 Pfam PF00394 Multicopper oxidase 175 289 3.9E-5 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DDU33_08005 42702baa470821e441e5cde5d1c6b3a5 314 Gene3D G3DSA:1.10.10.60 183 291 2.5E-28 T 14-10-2018 DDU33_08005 42702baa470821e441e5cde5d1c6b3a5 314 SUPERFAMILY SSF46689 188 238 5.38E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_08005 42702baa470821e441e5cde5d1c6b3a5 314 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 175 2.7E-19 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DDU33_08005 42702baa470821e441e5cde5d1c6b3a5 314 SUPERFAMILY SSF46689 240 286 1.97E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_08005 42702baa470821e441e5cde5d1c6b3a5 314 Pfam PF12833 Helix-turn-helix domain 210 285 2.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_08005 42702baa470821e441e5cde5d1c6b3a5 314 SMART SM00342 204 287 1.2E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_08005 42702baa470821e441e5cde5d1c6b3a5 314 SUPERFAMILY SSF51182 51 97 2.67E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 PIRSF PIRSF005901 2 188 4.6E-64 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.98 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 Gene3D G3DSA:2.40.50.140 130 188 1.1E-28 T 14-10-2018 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 SUPERFAMILY SSF50249 69 128 1.33E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.2E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.1E-23 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 Gene3D G3DSA:2.30.30.30 1 65 3.1E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 SUPERFAMILY SSF50249 130 187 9.25E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 SUPERFAMILY SSF50104 2 63 1.91E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 3.2E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 SMART SM01185 69 123 3.1E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 Gene3D G3DSA:2.40.50.140 66 129 4.8E-27 T 14-10-2018 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.9E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DDU33_08590 7500fd206b799b075ab7f9f9b60e827b 188 SMART SM00841 131 186 2.4E-33 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 227 42.421 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 PIRSF PIRSF000709 1 113 2.4E-6 T 14-10-2018 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 PIRSF PIRSF000709 172 223 4.8 T 14-10-2018 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 2 227 3.2E-114 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 135 219 2.6E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 122 2.5E-27 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 Gene3D G3DSA:3.40.50.1240 1 227 1.1E-81 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 SMART SM00855 2 188 1.7E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDU33_07080 b42b7798ce9a936dd175ae3617b57a3a 227 SUPERFAMILY SSF53254 1 220 3.33E-72 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 Pfam PF07687 Peptidase dimerisation domain 173 284 2.0E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 377 61.375 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 Gene3D G3DSA:3.40.630.10 8 362 2.5E-81 T 14-10-2018 DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 Pfam PF01546 Peptidase family M20/M25/M40 71 373 1.0E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 SUPERFAMILY SSF55031 176 285 5.68E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 142 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 6 372 2.0E-133 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 Gene3D G3DSA:3.30.70.360 176 298 2.5E-81 T 14-10-2018 DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 70 79 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDU33_06085 7ee917462e9f23561fb669c771879fb2 377 SUPERFAMILY SSF53187 3 376 1.63E-56 T 14-10-2018 DDU33_02245 51f575dcb9ab91fc2ac2138c0a716a38 364 Pfam PF11873 Domain of unknown function (DUF3393) 6 194 1.1E-65 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal DDU33_02245 51f575dcb9ab91fc2ac2138c0a716a38 364 SUPERFAMILY SSF53955 162 360 3.56E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_02245 51f575dcb9ab91fc2ac2138c0a716a38 364 Pfam PF01464 Transglycosylase SLT domain 200 322 4.3E-29 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DDU33_02245 51f575dcb9ab91fc2ac2138c0a716a38 364 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 4 362 62.419 T 14-10-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 DDU33_02245 51f575dcb9ab91fc2ac2138c0a716a38 364 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 217 245 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DDU33_02245 51f575dcb9ab91fc2ac2138c0a716a38 364 Gene3D G3DSA:1.10.530.10 179 359 5.3E-49 T 14-10-2018 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 251 284 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 175 316 2.7E-33 T 14-10-2018 IPR001453 MoaB/Mog domain DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 SMART SM00852 178 320 2.0E-44 T 14-10-2018 IPR001453 MoaB/Mog domain DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 Pfam PF00994 Probable molybdopterin binding domain 178 320 2.1E-31 T 14-10-2018 IPR001453 MoaB/Mog domain DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 SUPERFAMILY SSF63882 3 174 4.84E-57 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 165 8.1E-48 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 Gene3D G3DSA:2.170.190.11 47 139 6.1E-143 T 14-10-2018 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 Pfam PF03454 MoeA C-terminal region (domain IV) 341 409 2.2E-16 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 Gene3D G3DSA:2.40.340.10 334 404 6.1E-143 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 SUPERFAMILY SSF53218 175 325 9.16E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 SUPERFAMILY SSF63867 336 413 7.72E-21 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 Gene3D G3DSA:3.90.105.10 23 172 6.1E-143 T 14-10-2018 DDU33_10110 b5800de3da0503efb43212dee0e791c2 414 Gene3D G3DSA:3.40.980.10 173 333 6.1E-143 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DDU33_10710 0a1a1705def5ca65ab65c12a4fc038d5 703 Pfam PF00593 TonB dependent receptor 278 702 1.7E-37 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DDU33_10710 0a1a1705def5ca65ab65c12a4fc038d5 703 SUPERFAMILY SSF56935 44 703 1.18E-80 T 14-10-2018 DDU33_10710 0a1a1705def5ca65ab65c12a4fc038d5 703 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 686 703 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site DDU33_10710 0a1a1705def5ca65ab65c12a4fc038d5 703 Gene3D G3DSA:2.170.130.10 36 147 7.6E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_10710 0a1a1705def5ca65ab65c12a4fc038d5 703 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 141 1.2E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 SMART SM00533 284 590 1.9E-106 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 SUPERFAMILY SSF48334 268 564 6.02E-87 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Gene3D G3DSA:1.10.1420.10 267 558 4.3E-102 T 14-10-2018 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Gene3D G3DSA:3.30.420.110 128 263 8.2E-36 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Pfam PF00488 MutS domain V 610 796 1.1E-86 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 SUPERFAMILY SSF55271 3 114 4.19E-43 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Gene3D G3DSA:1.10.1420.10 387 502 4.3E-102 T 14-10-2018 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Pfam PF05190 MutS family domain IV 427 516 1.6E-29 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Pfam PF05188 MutS domain II 129 253 9.2E-29 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Gene3D G3DSA:3.40.50.300 567 861 9.3E-101 T 14-10-2018 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Pfam PF05192 MutS domain III 270 558 7.2E-40 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 SUPERFAMILY SSF52540 566 796 4.58E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 8 855 25.104 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 8 860 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 SUPERFAMILY SSF53150 115 267 6.93E-41 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Gene3D G3DSA:3.40.1170.10 1 122 1.8E-51 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 Pfam PF01624 MutS domain I 9 120 1.8E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 SMART SM00534 606 793 3.1E-118 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DDU33_02450 0e6a46142bf4b5cf395fe435001295e1 864 PIRSF PIRSF037677 2 841 6.6E-157 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 SMART SM00963 215 295 4.8E-24 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 Pfam PF02881 SRP54-type protein, helical bundle domain 227 291 2.6E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 238 511 64.272 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 238 510 7.6E-117 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 484 497 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 SMART SM00382 309 501 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 SUPERFAMILY SSF52540 307 509 9.14E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 Pfam PF00448 SRP54-type protein, GTPase domain 311 510 4.9E-79 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 SMART SM00962 310 511 4.4E-125 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 Gene3D G3DSA:3.40.50.300 310 499 2.1E-118 T 14-10-2018 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 SUPERFAMILY SSF47364 210 289 1.44E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DDU33_10685 9afb9fbf6a169d27aaedd3248d505f0e 517 Gene3D G3DSA:1.20.120.140 212 509 2.1E-118 T 14-10-2018 DDU33_01945 8441c705fe82475d4d523c5ec2df54a4 148 Pfam PF00258 Flavodoxin 7 137 7.0E-24 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDU33_01945 8441c705fe82475d4d523c5ec2df54a4 148 Gene3D G3DSA:3.40.50.360 2 148 8.3E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_01945 8441c705fe82475d4d523c5ec2df54a4 148 SUPERFAMILY SSF52218 3 147 8.8E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 143 155 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 SUPERFAMILY SSF51306 75 295 8.89E-69 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 63 271 9.6E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 86 93 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 Gene3D G3DSA:2.170.230.10 152 230 2.9E-74 T 14-10-2018 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 Pfam PF00717 Peptidase S24-like 83 157 4.0E-20 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 Gene3D G3DSA:2.10.109.10 75 270 2.9E-74 T 14-10-2018 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 93 5.7E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 141 153 5.7E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 5.7E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DDU33_07475 b5f04d0f24d6b67aecf79fa94842e3b6 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 4.3E-6 T 14-10-2018 IPR019533 Peptidase S26 DDU33_05650 2fa277df6f6b4ba2e88fdc8d149addae 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 5.2E-65 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DDU33_05650 2fa277df6f6b4ba2e88fdc8d149addae 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DDU33_05650 2fa277df6f6b4ba2e88fdc8d149addae 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 9.2E-25 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DDU33_05650 2fa277df6f6b4ba2e88fdc8d149addae 135 Gene3D G3DSA:3.10.180.10 1 133 6.0E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDU33_05650 2fa277df6f6b4ba2e88fdc8d149addae 135 SUPERFAMILY SSF54593 1 127 2.82E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDU33_05650 2fa277df6f6b4ba2e88fdc8d149addae 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DDU33_03900 04a8dd47a5cb64f95847413b0979b782 503 Pfam PF04575 Protein of unknown function (DUF560) 204 503 7.8E-93 T 14-10-2018 IPR007655 Protein of unknown function DUF560 DDU33_03900 04a8dd47a5cb64f95847413b0979b782 503 Gene3D G3DSA:1.25.40.10 81 242 2.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_03900 04a8dd47a5cb64f95847413b0979b782 503 SUPERFAMILY SSF48452 112 202 1.76E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 277 2.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 Gene3D G3DSA:3.40.50.300 337 652 2.1E-83 T 14-10-2018 DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 SUPERFAMILY SSF161098 77 268 1.27E-19 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 SMART SM00382 368 561 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 Pfam PF00005 ABC transporter 360 511 1.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 561 634 1.2E-10 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 Gene3D G3DSA:1.10.3720.10 72 279 1.2E-14 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 53 1.7E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 SUPERFAMILY SSF52540 339 582 2.11E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07355 5b96181fa44564c4f3229b90b5cff52d 652 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 563 619 3.8E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 SUPERFAMILY SSF69075 333 432 9.02E-27 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 SUPERFAMILY SSF69742 1 172 1.83E-42 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 108 131 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 Gene3D G3DSA:3.40.50.720 175 329 1.5E-39 T 14-10-2018 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 336 427 1.3E-21 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 SUPERFAMILY SSF51735 176 331 5.34E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09475 e67077508a522d910b78b81e44b8930f 435 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 186 322 2.8E-43 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DDU33_09475 e67077508a522d910b78b81e44b8930f 435 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 434 28.913 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 PIRSF PIRSF000445 1 435 5.4E-144 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 170 8.1E-46 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 431 6.9E-127 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_09475 e67077508a522d910b78b81e44b8930f 435 Gene3D G3DSA:3.30.460.30 1 172 3.6E-49 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.1E-256 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 Gene3D G3DSA:1.10.560.10 8 522 1.4E-242 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 SUPERFAMILY SSF48592 7 522 2.37E-78 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 SUPERFAMILY SSF54849 137 203 6.18E-23 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.0E-96 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.108 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 SUPERFAMILY SSF52029 184 376 1.01E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 Gene3D G3DSA:3.50.7.10 192 372 1.4E-242 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DDU33_05355 4424b6fed1f3bfa4c176b362ebd50aaf 547 Gene3D G3DSA:3.30.260.10 136 410 1.4E-242 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DDU33_01955 e87dde5d26fa55edd514534ce2071b91 462 Pfam PF12390 Selenocysteine synthase N terminal 5 44 2.1E-8 T 14-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DDU33_01955 e87dde5d26fa55edd514534ce2071b91 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 223.251 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DDU33_01955 e87dde5d26fa55edd514534ce2071b91 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 458 1.4E-182 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DDU33_01955 e87dde5d26fa55edd514534ce2071b91 462 Gene3D G3DSA:3.90.1150.110 7 450 5.2E-156 T 14-10-2018 DDU33_01955 e87dde5d26fa55edd514534ce2071b91 462 SUPERFAMILY SSF53383 78 387 4.62E-42 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_01955 e87dde5d26fa55edd514534ce2071b91 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 448 2.2E-168 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DDU33_01955 e87dde5d26fa55edd514534ce2071b91 462 Gene3D G3DSA:3.40.640.10 94 358 5.2E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 Pfam PF00083 Sugar (and other) transporter 14 477 3.2E-130 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 473 1.2E-143 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 ProSitePatterns PS00216 Sugar transport proteins signature 1. 331 348 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 PRINTS PR00171 Sugar transporter signature 129 148 5.0E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 PRINTS PR00171 Sugar transporter signature 372 393 5.0E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 PRINTS PR00171 Sugar transporter signature 395 407 5.0E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 PRINTS PR00171 Sugar transporter signature 21 31 5.0E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 PRINTS PR00171 Sugar transporter signature 287 297 5.0E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 Gene3D G3DSA:1.20.1250.20 255 480 3.4E-72 T 14-10-2018 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 Gene3D G3DSA:1.20.1250.20 4 249 2.9E-72 T 14-10-2018 DDU33_01765 daba865b0f6c9a6715f1c02d9fe1b2ac 480 SUPERFAMILY SSF103473 5 474 6.41E-64 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Gene3D G3DSA:3.30.230.10 489 694 7.7E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Gene3D G3DSA:2.40.30.10 299 405 3.1E-45 T 14-10-2018 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Gene3D G3DSA:3.30.70.870 410 488 2.1E-33 T 14-10-2018 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Pfam PF03144 Elongation factor Tu domain 2 329 396 7.6E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 SUPERFAMILY SSF52540 7 287 1.77E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 SUPERFAMILY SSF50447 271 409 4.64E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 SUPERFAMILY SSF54980 607 697 1.4E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 113.577 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 SMART SM00838 607 694 2.5E-52 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-35 T 14-10-2018 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Pfam PF00009 Elongation factor Tu GTP binding domain 10 287 1.7E-67 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Pfam PF00679 Elongation factor G C-terminus 607 693 9.7E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Pfam PF03764 Elongation factor G, domain IV 484 605 2.4E-47 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 SMART SM00889 485 605 4.3E-73 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 SUPERFAMILY SSF54211 484 606 2.48E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Gene3D G3DSA:3.30.70.240 611 681 7.7E-84 T 14-10-2018 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 Gene3D G3DSA:3.40.50.300 1 298 1.4E-118 T 14-10-2018 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 187 2.7E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_03845 4de7cbb3d62560bf16658297c0eb1994 701 SUPERFAMILY SSF54980 407 485 1.29E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_06635 00d06afcb16680605dec220d89f20a0d 347 Gene3D G3DSA:3.40.50.2000 29 181 4.6E-20 T 14-10-2018 DDU33_06635 00d06afcb16680605dec220d89f20a0d 347 SUPERFAMILY SSF53756 35 340 3.61E-57 T 14-10-2018 DDU33_06635 00d06afcb16680605dec220d89f20a0d 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 102 326 8.4E-15 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DDU33_06635 00d06afcb16680605dec220d89f20a0d 347 Gene3D G3DSA:3.40.50.2000 184 342 6.1E-15 T 14-10-2018 DDU33_00930 c2eed7accfb3c283333a4f9962837831 424 Gene3D G3DSA:1.20.1250.20 7 210 3.5E-50 T 14-10-2018 DDU33_00930 c2eed7accfb3c283333a4f9962837831 424 Pfam PF07690 Major Facilitator Superfamily 24 383 1.5E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_00930 c2eed7accfb3c283333a4f9962837831 424 ProSitePatterns PS00942 glpT family of transporters signature. 138 154 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 DDU33_00930 c2eed7accfb3c283333a4f9962837831 424 PIRSF PIRSF002808 2 424 1.1E-137 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DDU33_00930 c2eed7accfb3c283333a4f9962837831 424 SUPERFAMILY SSF103473 9 419 9.16E-79 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_00930 c2eed7accfb3c283333a4f9962837831 424 Gene3D G3DSA:1.20.1250.20 226 424 3.1E-43 T 14-10-2018 DDU33_00930 c2eed7accfb3c283333a4f9962837831 424 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 23 400 9.1E-136 T 14-10-2018 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 Gene3D G3DSA:1.10.287.470 129 159 5.7E-6 T 14-10-2018 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 442 457 7.5E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 457 477 7.5E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 398 7.5E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 398 421 7.5E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 7.5E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 362 7.5E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 7.5E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 Pfam PF13437 HlyD family secretion protein 329 431 7.4E-14 T 14-10-2018 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 Gene3D G3DSA:2.40.30.170 359 408 1.5E-10 T 14-10-2018 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 Gene3D G3DSA:2.40.50.100 105 128 5.7E-6 T 14-10-2018 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 ProSitePatterns PS00543 HlyD family secretion proteins signature. 442 464 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 Pfam PF13533 Biotin-lipoyl like 104 129 3.7E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 SUPERFAMILY SSF111369 95 158 7.06E-6 T 14-10-2018 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 Gene3D G3DSA:2.40.50.100 327 358 1.5E-10 T 14-10-2018 DDU33_08405 3ef35e8626607969b33711fe536ba04f 478 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 56 478 2.8E-111 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DDU33_04380 126a7a3c7c391383151ca19011bea430 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 214 1.2E-58 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DDU33_04380 126a7a3c7c391383151ca19011bea430 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.0E-67 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DDU33_04380 126a7a3c7c391383151ca19011bea430 219 SUPERFAMILY SSF75445 129 199 2.88E-23 T 14-10-2018 DDU33_04380 126a7a3c7c391383151ca19011bea430 219 Gene3D G3DSA:3.40.50.1360 7 210 3.8E-78 T 14-10-2018 DDU33_04380 126a7a3c7c391383151ca19011bea430 219 Gene3D G3DSA:3.30.70.260 125 196 3.8E-78 T 14-10-2018 DDU33_04380 126a7a3c7c391383151ca19011bea430 219 SUPERFAMILY SSF100950 1 147 8.84E-46 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_04380 126a7a3c7c391383151ca19011bea430 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 218 33.658 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 Gene3D G3DSA:3.30.860.10 1 91 2.2E-43 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.0E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 Pfam PF00203 Ribosomal protein S19 3 83 2.6E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 SUPERFAMILY SSF54570 3 84 1.83E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 PIRSF PIRSF002144 1 91 4.2E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03555 d63869c21e5a409ec218bd7dfc46ca4c 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 Gene3D G3DSA:3.40.50.12160 2 133 5.9E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 Pfam PF01938 TRAM domain 377 439 8.9E-21 T 14-10-2018 IPR002792 TRAM domain DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 Gene3D G3DSA:3.80.30.20 144 376 2.4E-84 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 4.0E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 Pfam PF04055 Radical SAM superfamily 150 323 1.3E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 SMART SM00729 146 366 1.4E-64 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 SUPERFAMILY SSF102114 128 373 3.53E-63 T 14-10-2018 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 440 75.056 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 439 1.9E-207 T 14-10-2018 DDU33_05275 f96adcb63e1c4d434db50c7a1ddeb484 475 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 436 2.0E-157 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 Pfam PF01479 S4 domain 1 47 4.3E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 SMART SM00363 1 61 3.9E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.6E-54 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 SUPERFAMILY SSF55174 1 57 8.83E-13 T 14-10-2018 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 SUPERFAMILY SSF55120 61 227 4.16E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 Gene3D G3DSA:3.30.70.580 62 227 1.5E-60 T 14-10-2018 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 Gene3D G3DSA:3.10.290.10 1 57 5.6E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 Pfam PF00849 RNA pseudouridylate synthase 62 192 6.1E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06920 e7adecc7283424fd15c2833c992ee86c 230 Gene3D G3DSA:3.30.70.1560 128 209 1.5E-60 T 14-10-2018 DDU33_09100 7ed75edefa4caf7ac1e46d39dfc22eb3 54 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 52 17.898 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 DDU33_09100 7ed75edefa4caf7ac1e46d39dfc22eb3 54 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 1.0E-11 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 DDU33_09100 7ed75edefa4caf7ac1e46d39dfc22eb3 54 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 3.2E-23 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05658 Head domain of trimeric autotransporter adhesin 158 182 9.9E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05658 Head domain of trimeric autotransporter adhesin 73 99 2.4E-6 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05658 Head domain of trimeric autotransporter adhesin 131 154 1.6E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05658 Head domain of trimeric autotransporter adhesin 468 493 6.3E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 2384 2537 4.05E-5 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1981 2025 4.9E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1615 1659 2.1E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1799 1843 4.9E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2514 2554 8.0E-8 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 539 581 7.3E-8 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 715 750 1.4E-8 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 839 879 6.7E-7 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1431 1475 2.8E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2322 2358 4.1E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2163 2206 7.1E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1247 1291 6.6E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 1519 1641 3.27E-5 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 1703 1825 3.27E-5 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 8.6E-11 T 14-10-2018 IPR024973 ESPR domain DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 284 384 1.24E-16 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 2263 2344 1.44E-9 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:2.150.10.10 741 862 4.9E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:2.150.10.10 2192 2346 1.1E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 758 860 6.41E-5 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 393 564 4.18E-24 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.1300.30 2527 2626 3.6E-31 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 103 206 1.44E-12 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 1886 2007 3.4E-5 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 2068 2189 1.1E-6 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:2.20.25.490 639 690 1.7E-5 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Pfam PF03895 YadA-like membrane anchor domain 2567 2626 5.7E-15 T 14-10-2018 IPR005594 YadA-like, C-terminal DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:2.150.10.10 201 324 2.5E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:2.150.10.10 18 197 4.2E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:1.20.5.170 1806 1829 5.7E-7 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:1.20.5.170 1622 1645 3.2E-7 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:1.20.5.170 545 570 3.5E-7 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:1.20.5.170 1438 1461 3.1E-7 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:1.20.5.170 1254 1277 5.4E-7 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:1.20.5.170 1988 2011 5.7E-7 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:1.20.5.170 2169 2191 1.0E-9 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF101967 46 117 4.71E-5 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 SUPERFAMILY SSF54523 2527 2626 2.35E-24 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:2.150.10.10 325 396 2.2E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:2.150.10.10 397 507 3.5E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.390.90 1397 1436 4.3E-15 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.390.90 1765 1804 6.0E-15 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.390.90 1581 1620 6.0E-15 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.390.90 1947 1986 6.7E-15 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.390.90 2483 2519 1.8E-6 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.390.90 1213 1252 2.2E-15 T 14-10-2018 DDU33_01940 7952818b967852c62ae7b15e1140c35c 2626 Gene3D G3DSA:3.30.390.90 2129 2168 1.4E-16 T 14-10-2018 DDU33_03535 929bbbba15ebd21336e73af931d8c3a6 210 Gene3D G3DSA:2.40.50.620 32 96 9.0E-16 T 14-10-2018 DDU33_03535 929bbbba15ebd21336e73af931d8c3a6 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 208 40.463 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03535 929bbbba15ebd21336e73af931d8c3a6 210 Gene3D G3DSA:2.40.30.10 130 210 1.2E-16 T 14-10-2018 DDU33_03535 929bbbba15ebd21336e73af931d8c3a6 210 Pfam PF00297 Ribosomal protein L3 95 183 8.5E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03535 929bbbba15ebd21336e73af931d8c3a6 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site DDU33_03535 929bbbba15ebd21336e73af931d8c3a6 210 SUPERFAMILY SSF50447 1 209 1.06E-80 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_03535 929bbbba15ebd21336e73af931d8c3a6 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 205 1.1E-91 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_10680 06762b0a2b979890eba1f29ff79a9423 217 Pfam PF00005 ABC transporter 18 165 5.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10680 06762b0a2b979890eba1f29ff79a9423 217 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10680 06762b0a2b979890eba1f29ff79a9423 217 Gene3D G3DSA:3.40.50.300 1 217 2.6E-62 T 14-10-2018 DDU33_10680 06762b0a2b979890eba1f29ff79a9423 217 SMART SM00382 27 214 1.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10680 06762b0a2b979890eba1f29ff79a9423 217 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 1.6E-85 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 DDU33_10680 06762b0a2b979890eba1f29ff79a9423 217 SUPERFAMILY SSF52540 1 215 1.08E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08880 9158fd2a55d7a6abace661dce5e89417 352 Gene3D G3DSA:2.40.10.350 180 257 1.2E-34 T 14-10-2018 DDU33_08880 9158fd2a55d7a6abace661dce5e89417 352 Gene3D G3DSA:2.40.10.340 121 266 1.2E-34 T 14-10-2018 DDU33_08880 9158fd2a55d7a6abace661dce5e89417 352 Pfam PF04085 rod shape-determining protein MreC 123 269 5.8E-37 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DDU33_08880 9158fd2a55d7a6abace661dce5e89417 352 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 9.6E-104 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 SMART SM00487 25 223 4.6E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 SUPERFAMILY SSF52540 75 361 1.92E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 Pfam PF00270 DEAD/DEAH box helicase 31 195 2.9E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.5E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 Gene3D G3DSA:3.30.70.330 478 548 4.9E-10 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 Pfam PF03880 DbpA RNA binding domain 479 545 1.5E-18 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 Gene3D G3DSA:3.40.50.300 218 437 5.3E-51 T 14-10-2018 DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 551 44.565 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 Gene3D G3DSA:3.40.50.300 1 212 2.7E-75 T 14-10-2018 DDU33_07405 c30f691e022703fee3ce108c8710e72b 604 SMART SM00490 259 340 5.1E-33 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 Pfam PF00293 NUDIX domain 6 140 4.6E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 SUPERFAMILY SSF55811 3 142 5.42E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 Gene3D G3DSA:3.90.79.10 1 145 2.5E-42 T 14-10-2018 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.2E-40 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.2E-40 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.2E-40 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.2E-40 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDU33_04840 a223269a8e71043ab3e853ce0f0a89dc 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.2E-40 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 Pfam PF00206 Lyase 12 344 6.6E-105 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 5 472 1.3E-261 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 9.0E-7 T 14-10-2018 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 9.0E-7 T 14-10-2018 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 9.0E-7 T 14-10-2018 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 SUPERFAMILY SSF48557 1 456 4.12E-146 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 Gene3D G3DSA:1.10.275.10 5 141 2.5E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 Pfam PF10415 Fumarase C C-terminus 410 462 7.5E-17 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 Gene3D G3DSA:1.20.200.10 142 409 6.3E-115 T 14-10-2018 DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05485 daa85c24e1ab8a6533f518eece5a41c1 475 Gene3D G3DSA:1.10.40.30 410 459 4.7E-28 T 14-10-2018 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 Gene3D G3DSA:3.40.50.300 56 318 1.2E-106 T 14-10-2018 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 SUPERFAMILY SSF57716 7 42 4.85E-9 T 14-10-2018 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 SMART SM01086 320 413 4.0E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 SUPERFAMILY SSF52540 60 406 1.02E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 SMART SM00994 6 45 2.1E-16 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 Gene3D G3DSA:1.10.8.60 319 414 1.7E-37 T 14-10-2018 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 Pfam PF06689 ClpX C4-type zinc finger 8 43 1.7E-14 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 SMART SM00382 114 267 3.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 Gene3D G3DSA:3.30.50.30 2 45 6.3E-12 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 414 48.767 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 320 392 1.9E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 313 6.5E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDU33_00130 5bdfe0530c1e3aa2f96aac3479138a04 414 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 413 1.7E-192 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DDU33_00565 083da6a5dd672a0a03506ca5c2358f20 115 Gene3D G3DSA:2.40.50.140 2 111 3.4E-29 T 14-10-2018 DDU33_00565 083da6a5dd672a0a03506ca5c2358f20 115 Pfam PF00436 Single-strand binding protein family 5 86 1.6E-8 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DDU33_00565 083da6a5dd672a0a03506ca5c2358f20 115 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 5 102 2.0E-32 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DDU33_00565 083da6a5dd672a0a03506ca5c2358f20 115 PIRSF PIRSF003135 1 103 3.2E-44 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DDU33_00565 083da6a5dd672a0a03506ca5c2358f20 115 Hamap MF_00720 Primosomal replication protein N [priB]. 4 102 21.866 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DDU33_00565 083da6a5dd672a0a03506ca5c2358f20 115 SUPERFAMILY SSF50249 4 108 7.05E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 Gene3D G3DSA:3.40.50.620 1 163 3.2E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 56 6.7E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 Pfam PF01467 Cytidylyltransferase-like 6 135 2.8E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 156 1.1E-54 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 SUPERFAMILY SSF52374 3 155 4.69E-41 T 14-10-2018 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 9.0E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 9.0E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 9.0E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 9.0E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDU33_00035 b28e62e848f3bd778d07b285faf68efc 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 160 33.71 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DDU33_08300 dde9030cf83d6077a6b5ee768a841add 126 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 5.0E-45 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDU33_08300 dde9030cf83d6077a6b5ee768a841add 126 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DDU33_08300 dde9030cf83d6077a6b5ee768a841add 126 SUPERFAMILY SSF89919 3 106 1.28E-34 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily DDU33_08300 dde9030cf83d6077a6b5ee768a841add 126 Gene3D G3DSA:3.30.300.20 1 106 2.6E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_08300 dde9030cf83d6077a6b5ee768a841add 126 Pfam PF02033 Ribosome-binding factor A 7 111 1.9E-32 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDU33_08300 dde9030cf83d6077a6b5ee768a841add 126 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 3.5E-44 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDU33_08300 dde9030cf83d6077a6b5ee768a841add 126 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 112 28.113 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DDU33_06175 858a14394a5cfee832e07acf474f063e 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 205 1.9E-50 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDU33_06175 858a14394a5cfee832e07acf474f063e 210 Gene3D G3DSA:3.40.50.1240 2 210 2.4E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_06175 858a14394a5cfee832e07acf474f063e 210 SMART SM00855 4 162 4.7E-22 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDU33_06175 858a14394a5cfee832e07acf474f063e 210 SUPERFAMILY SSF53254 2 209 2.06E-53 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_06175 858a14394a5cfee832e07acf474f063e 210 PIRSF PIRSF000709 2 185 4.1E-16 T 14-10-2018 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 PRINTS PR00992 Alanine racemase signature 26 42 2.4E-54 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 PRINTS PR00992 Alanine racemase signature 356 369 2.4E-54 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 PRINTS PR00992 Alanine racemase signature 266 281 2.4E-54 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 PRINTS PR00992 Alanine racemase signature 304 321 2.4E-54 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 PRINTS PR00992 Alanine racemase signature 61 79 2.4E-54 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 PRINTS PR00992 Alanine racemase signature 283 298 2.4E-54 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 PRINTS PR00992 Alanine racemase signature 210 237 2.4E-54 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 Hamap MF_01201 Alanine racemase. 1 374 33.725 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 Gene3D G3DSA:3.20.20.10 10 235 8.6E-114 T 14-10-2018 IPR029066 PLP-binding barrel DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 TIGRFAM TIGR00492 alr: alanine racemase 3 373 1.4E-117 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 SMART SM01005 250 374 6.1E-67 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 Gene3D G3DSA:2.40.37.10 8 369 8.6E-114 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 Pfam PF00842 Alanine racemase, C-terminal domain 250 369 3.4E-40 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 Pfam PF01168 Alanine racemase, N-terminal domain 8 237 5.2E-66 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 SUPERFAMILY SSF50621 245 373 1.81E-44 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDU33_10395 7dcd81eb3dd791aaf65bf449ce8fae6c 374 SUPERFAMILY SSF51419 8 251 3.34E-57 T 14-10-2018 IPR029066 PLP-binding barrel DDU33_06320 afa269b25e3eca22fb331751ed3facbd 250 Gene3D G3DSA:3.40.50.1820 1 248 1.1E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_06320 afa269b25e3eca22fb331751ed3facbd 250 Pfam PF00756 Putative esterase 10 239 1.0E-16 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DDU33_06320 afa269b25e3eca22fb331751ed3facbd 250 SUPERFAMILY SSF53474 2 244 8.68E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_08930 5df4bcffe356f668da2eaf9f406bd167 225 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 99 106 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDU33_08930 5df4bcffe356f668da2eaf9f406bd167 225 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 220 43.034 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDU33_08930 5df4bcffe356f668da2eaf9f406bd167 225 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 220 1.5E-72 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDU33_08930 5df4bcffe356f668da2eaf9f406bd167 225 SUPERFAMILY SSF53448 5 220 3.03E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_08930 5df4bcffe356f668da2eaf9f406bd167 225 Gene3D G3DSA:3.90.550.10 1 224 3.3E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_08930 5df4bcffe356f668da2eaf9f406bd167 225 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 221 2.3E-81 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DDU33_02815 e37d67906ce2f81a0e80024e75cff3f7 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_02815 e37d67906ce2f81a0e80024e75cff3f7 296 Gene3D G3DSA:3.40.190.290 91 291 2.4E-65 T 14-10-2018 DDU33_02815 e37d67906ce2f81a0e80024e75cff3f7 296 Gene3D G3DSA:1.10.10.10 3 89 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_02815 e37d67906ce2f81a0e80024e75cff3f7 296 Pfam PF03466 LysR substrate binding domain 88 291 2.8E-47 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_02815 e37d67906ce2f81a0e80024e75cff3f7 296 SUPERFAMILY SSF53850 89 294 2.71E-49 T 14-10-2018 DDU33_02815 e37d67906ce2f81a0e80024e75cff3f7 296 SUPERFAMILY SSF46785 4 108 1.7E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 4.3E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 Gene3D G3DSA:1.10.166.10 1 69 2.0E-32 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 2 68 1.6E-27 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 SUPERFAMILY SSF51161 2 255 5.82E-78 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 271 55.277 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 272 4.7E-149 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 174 208 3.5E-14 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_01465 cf6e2563c861d5ee54a27b93ffcc6709 274 Gene3D G3DSA:2.160.10.10 86 256 8.0E-59 T 14-10-2018 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 SUPERFAMILY SSF53901 14 292 3.76E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 Pfam PF02803 Thiolase, C-terminal domain 294 432 7.6E-22 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 PIRSF PIRSF000429 8 434 3.1E-82 T 14-10-2018 IPR002155 Thiolase GO:0016747 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 Gene3D G3DSA:3.40.47.10 4 433 7.6E-86 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 Pfam PF00108 Thiolase, N-terminal domain 14 286 3.0E-47 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 432 3.9E-90 T 14-10-2018 IPR002155 Thiolase GO:0016747 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 93 111 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DDU33_09835 3adf99bf6c173345d2553a48699e34fb 434 SUPERFAMILY SSF53901 292 432 2.5E-24 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 PIRSF PIRSF000463 6 737 6.8E-286 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 108 725 3.8E-292 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 100 727 43.502 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 Gene3D G3DSA:2.60.40.10 3 220 6.1E-71 T 14-10-2018 IPR013783 Immunoglobulin-like fold DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 Gene3D G3DSA:3.20.20.80 229 613 4.5E-170 T 14-10-2018 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 SMART SM00642 246 592 1.4E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 SUPERFAMILY SSF81296 16 114 1.17E-17 T 14-10-2018 IPR014756 Immunoglobulin E-set DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 124 206 8.1E-24 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 Pfam PF00128 Alpha amylase, catalytic domain 271 343 1.1E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 SUPERFAMILY SSF51011 624 727 5.86E-35 T 14-10-2018 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 Gene3D G3DSA:2.60.40.1180 624 729 1.4E-38 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 SUPERFAMILY SSF81296 117 219 6.65E-35 T 14-10-2018 IPR014756 Immunoglobulin E-set DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 629 726 6.5E-22 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DDU33_08315 f02ce64f04ec681253b469b78a206b09 750 SUPERFAMILY SSF51445 228 622 9.4E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_04205 0e064c4cf86f696618a3390cd1c55a31 430 Gene3D G3DSA:2.40.170.10 24 430 1.1E-149 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 DDU33_04205 0e064c4cf86f696618a3390cd1c55a31 430 SUPERFAMILY SSF56935 24 430 5.86E-132 T 14-10-2018 DDU33_04205 0e064c4cf86f696618a3390cd1c55a31 430 Pfam PF02264 LamB porin 26 430 4.5E-137 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 DDU33_04205 0e064c4cf86f696618a3390cd1c55a31 430 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 425 3.0E-161 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 DDU33_01240 ad8a595b64dae9a07eca7858c924f8b3 72 SUPERFAMILY SSF118001 1 70 7.19E-26 T 14-10-2018 IPR036685 YehU-like superfamily DDU33_01240 ad8a595b64dae9a07eca7858c924f8b3 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.0E-29 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 DDU33_01240 ad8a595b64dae9a07eca7858c924f8b3 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 2.0E-18 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 DDU33_01240 ad8a595b64dae9a07eca7858c924f8b3 72 PIRSF PIRSF006169 1 72 3.4E-34 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 DDU33_01240 ad8a595b64dae9a07eca7858c924f8b3 72 Gene3D G3DSA:1.10.10.610 1 71 2.2E-23 T 14-10-2018 IPR036685 YehU-like superfamily DDU33_04720 1bb8653c652b9fc0e8df9b7f874df230 432 Gene3D G3DSA:3.50.50.60 34 389 1.1E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_04720 1bb8653c652b9fc0e8df9b7f874df230 432 Gene3D G3DSA:3.30.9.10 126 350 1.1E-77 T 14-10-2018 DDU33_04720 1bb8653c652b9fc0e8df9b7f874df230 432 SUPERFAMILY SSF51905 33 397 1.09E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_04720 1bb8653c652b9fc0e8df9b7f874df230 432 Pfam PF01266 FAD dependent oxidoreductase 34 387 1.5E-58 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDU33_10015 65a4010b41a9875e30b6f300782f3453 243 Pfam PF04452 RNA methyltransferase 20 237 8.4E-75 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DDU33_10015 65a4010b41a9875e30b6f300782f3453 243 SUPERFAMILY SSF75217 75 243 4.06E-52 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DDU33_10015 65a4010b41a9875e30b6f300782f3453 243 PIRSF PIRSF015601 2 243 3.0E-54 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DDU33_10015 65a4010b41a9875e30b6f300782f3453 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 9.0E-87 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DDU33_10015 65a4010b41a9875e30b6f300782f3453 243 Gene3D G3DSA:3.40.1280.10 74 243 3.4E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDU33_10015 65a4010b41a9875e30b6f300782f3453 243 SUPERFAMILY SSF88697 2 70 1.33E-17 T 14-10-2018 IPR015947 PUA-like superfamily DDU33_10015 65a4010b41a9875e30b6f300782f3453 243 Gene3D G3DSA:2.40.240.20 1 73 3.3E-22 T 14-10-2018 DDU33_00330 ba206e81de68752d0d393024518d4d17 151 Gene3D G3DSA:3.30.70.1290 7 134 3.4E-27 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DDU33_00330 ba206e81de68752d0d393024518d4d17 151 SMART SM01321 3 118 9.6E-24 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DDU33_00330 ba206e81de68752d0d393024518d4d17 151 SUPERFAMILY SSF143422 2 120 1.96E-30 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DDU33_00330 ba206e81de68752d0d393024518d4d17 151 Pfam PF01797 Transposase IS200 like 7 118 1.4E-26 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DDU33_06835 ccd4ed5b49db49d72c078b4bb9816112 140 Gene3D G3DSA:3.30.420.140 1 137 3.6E-45 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DDU33_06835 ccd4ed5b49db49d72c078b4bb9816112 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 25.859 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DDU33_06835 ccd4ed5b49db49d72c078b4bb9816112 140 SUPERFAMILY SSF53098 2 136 3.19E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_06835 ccd4ed5b49db49d72c078b4bb9816112 140 Pfam PF03652 Holliday junction resolvase 4 135 2.2E-42 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DDU33_06835 ccd4ed5b49db49d72c078b4bb9816112 140 SMART SM00732 3 103 1.2E-42 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DDU33_06835 ccd4ed5b49db49d72c078b4bb9816112 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 3.4E-59 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 Gene3D G3DSA:3.40.50.1170 2 210 3.7E-65 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 PRINTS PR00139 Asparaginase/glutaminase family signature 254 272 2.6E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 2.6E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 2.6E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 PIRSF PIRSF500176 1 319 1.4E-91 T 14-10-2018 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 PIRSF PIRSF001220 1 320 1.0E-93 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 Gene3D G3DSA:3.40.50.40 211 321 1.3E-26 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 SMART SM00870 4 319 5.4E-133 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 SUPERFAMILY SSF53774 3 313 1.7E-96 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DDU33_08210 aa31e2cb3927647627cb1216d70ee7fe 321 Pfam PF00710 Asparaginase, N-terminal 4 191 1.5E-57 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 SMART SM00271 222 287 2.3E-14 T 14-10-2018 IPR001623 DnaJ domain DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 288 37.577 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 PRINTS PR00625 DnaJ domain signature 225 243 5.9E-8 T 14-10-2018 IPR001623 DnaJ domain DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 PRINTS PR00625 DnaJ domain signature 267 287 5.9E-8 T 14-10-2018 IPR001623 DnaJ domain DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 PRINTS PR00625 DnaJ domain signature 243 258 5.9E-8 T 14-10-2018 IPR001623 DnaJ domain DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 Gene3D G3DSA:1.10.287.110 194 287 3.2E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 SUPERFAMILY SSF46565 135 284 3.45E-27 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 Pfam PF05099 Tellurite resistance protein TerB 54 175 2.1E-15 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 Pfam PF00226 DnaJ domain 224 283 4.6E-11 T 14-10-2018 IPR001623 DnaJ domain DDU33_07150 44e5710de85dfe1f801a40be9b2936fb 289 Gene3D G3DSA:1.10.3680.10 35 191 3.1E-20 T 14-10-2018 IPR029024 TerB-like DDU33_00095 5f217650cfeb0da750a9044c1deaae21 309 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 234 307 3.8E-20 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 DDU33_00095 5f217650cfeb0da750a9044c1deaae21 309 Gene3D G3DSA:3.30.1150.10 170 309 1.9E-21 T 14-10-2018 DDU33_00095 5f217650cfeb0da750a9044c1deaae21 309 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 236 308 8.9E-23 T 14-10-2018 IPR006260 TonB/TolA, C-terminal DDU33_00095 5f217650cfeb0da750a9044c1deaae21 309 PRINTS PR01374 Gram-negative bacterial tonB protein signature 229 250 1.6E-10 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDU33_00095 5f217650cfeb0da750a9044c1deaae21 309 PRINTS PR01374 Gram-negative bacterial tonB protein signature 137 147 1.6E-10 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDU33_00095 5f217650cfeb0da750a9044c1deaae21 309 PRINTS PR01374 Gram-negative bacterial tonB protein signature 250 268 1.6E-10 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DDU33_00095 5f217650cfeb0da750a9044c1deaae21 309 SUPERFAMILY SSF74653 232 303 2.22E-14 T 14-10-2018 DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-52 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.5E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 SUPERFAMILY SSF55658 1 57 2.44E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 Gene3D G3DSA:3.10.430.100 61 149 5.7E-28 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 2.3E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 SUPERFAMILY SSF55653 61 148 3.14E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.632 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_00575 ec54b6e3a078f9711ad1e40d554a6812 149 Gene3D G3DSA:3.40.5.10 1 50 1.3E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_05795 5f928fe179c53c119ae264bbace23834 274 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 18 271 4.8E-89 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DDU33_05795 5f928fe179c53c119ae264bbace23834 274 Pfam PF01226 Formate/nitrite transporter 7 268 4.0E-76 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DDU33_05795 5f928fe179c53c119ae264bbace23834 274 Gene3D G3DSA:1.20.1080.10 1 260 4.2E-96 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDU33_05795 5f928fe179c53c119ae264bbace23834 274 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 6 271 1.6E-130 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 DDU33_05795 5f928fe179c53c119ae264bbace23834 274 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 75 84 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site DDU33_01450 e21d0465fbf2a78e4feed16fcfb75dcf 260 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 75 155 9.4E-14 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif DDU33_01450 e21d0465fbf2a78e4feed16fcfb75dcf 260 Gene3D G3DSA:3.90.550.20 82 256 5.0E-14 T 14-10-2018 DDU33_01450 e21d0465fbf2a78e4feed16fcfb75dcf 260 SUPERFAMILY SSF53448 16 257 7.5E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_00975 d054530314c2f6b11c744c3740e91127 281 Gene3D G3DSA:3.20.20.20 7 281 5.3E-107 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_00975 d054530314c2f6b11c744c3740e91127 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 277 6.0E-102 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DDU33_00975 d054530314c2f6b11c744c3740e91127 281 SUPERFAMILY SSF51717 11 279 2.22E-102 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_00975 d054530314c2f6b11c744c3740e91127 281 Pfam PF00809 Pterin binding enzyme 23 262 1.0E-85 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_00975 d054530314c2f6b11c744c3740e91127 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 218 3.9E-92 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 7.1E-61 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 303 5.8E-17 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 Gene3D G3DSA:2.30.130.10 244 304 3.8E-7 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 SUPERFAMILY SSF88697 245 304 5.96E-11 T 14-10-2018 IPR015947 PUA-like superfamily DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 Gene3D G3DSA:3.30.2350.10 1 243 1.4E-94 T 14-10-2018 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 4.7E-21 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 303 19.204 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08305 e53503f73143cfce931f364e2b4b3887 305 SUPERFAMILY SSF55120 10 242 8.06E-83 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_05705 ba4288c3356177018c4aa964ff7c5e7f 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 188 5.3E-51 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DDU33_05705 ba4288c3356177018c4aa964ff7c5e7f 197 Pfam PF02545 Maf-like protein 5 189 2.5E-56 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DDU33_05705 ba4288c3356177018c4aa964ff7c5e7f 197 Hamap MF_00528 Septum formation protein Maf [maf]. 4 194 30.833 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DDU33_05705 ba4288c3356177018c4aa964ff7c5e7f 197 PIRSF PIRSF006305 1 197 9.2E-53 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DDU33_05705 ba4288c3356177018c4aa964ff7c5e7f 197 SUPERFAMILY SSF52972 2 189 5.17E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDU33_05705 ba4288c3356177018c4aa964ff7c5e7f 197 Gene3D G3DSA:3.90.950.10 3 194 2.2E-66 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 SUPERFAMILY SSF55200 90 179 7.32E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 2.3E-76 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 1.4E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.8E-32 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 Gene3D G3DSA:3.10.20.80 9 83 2.6E-34 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.764 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 Gene3D G3DSA:3.30.110.10 84 179 4.7E-39 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DDU33_06970 985d978433338733f9e9d9bcc3f41ba1 179 SUPERFAMILY SSF54364 13 86 1.44E-30 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DDU33_05560 768038eafc4228115c838a1c01683b5f 389 Pfam PF03054 tRNA methyl transferase 30 384 2.2E-142 T 14-10-2018 DDU33_05560 768038eafc4228115c838a1c01683b5f 389 Gene3D G3DSA:2.40.30.10 306 389 4.6E-32 T 14-10-2018 DDU33_05560 768038eafc4228115c838a1c01683b5f 389 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 30 385 39.756 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DDU33_05560 768038eafc4228115c838a1c01683b5f 389 Gene3D G3DSA:3.40.50.620 17 236 9.3E-94 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_05560 768038eafc4228115c838a1c01683b5f 389 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 30 384 3.0E-154 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DDU33_05560 768038eafc4228115c838a1c01683b5f 389 SUPERFAMILY SSF52402 27 319 2.43E-53 T 14-10-2018 DDU33_05560 768038eafc4228115c838a1c01683b5f 389 Gene3D G3DSA:2.30.30.280 237 305 4.2E-26 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 Pfam PF00633 Helix-hairpin-helix motif 112 140 6.0E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 Pfam PF14815 NUDIX domain 247 370 2.9E-19 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 SMART SM00525 204 224 0.002 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 181 2.3E-20 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 ProSitePatterns PS01155 Endonuclease III family signature. 115 144 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 SUPERFAMILY SSF55811 233 372 1.91E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 Gene3D G3DSA:3.90.79.10 238 375 4.4E-12 T 14-10-2018 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 SUPERFAMILY SSF48150 18 238 1.73E-76 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 19 287 2.3E-125 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 Gene3D G3DSA:1.10.340.30 34 145 4.1E-88 T 14-10-2018 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 SMART SM00478 52 203 4.1E-50 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 205 221 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DDU33_02255 e8bc3a14dc1cd1644cbb491683aac3ea 378 Gene3D G3DSA:1.10.1670.10 22 224 4.1E-88 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 SUPERFAMILY SSF46600 190 242 3.53E-14 T 14-10-2018 IPR036876 UVR domain superfamily DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Pfam PF01541 GIY-YIG catalytic domain 17 92 2.5E-11 T 14-10-2018 IPR000305 GIY-YIG endonuclease DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Pfam PF02151 UvrB/uvrC motif 204 236 3.7E-10 T 14-10-2018 IPR001943 UVR domain GO:0005515 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 SMART SM00278 588 607 5.5 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 SMART SM00278 556 575 130.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 SMART SM00465 16 97 2.7E-24 T 14-10-2018 IPR000305 GIY-YIG endonuclease DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Gene3D G3DSA:4.10.860.10 195 240 2.2E-6 T 14-10-2018 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 589 9.8E-226 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Gene3D G3DSA:3.30.420.340 377 552 8.5E-47 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 607 28.917 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 2.3E-44 T 14-10-2018 IPR001162 UvrC family homology region DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Gene3D G3DSA:1.10.150.20 555 610 3.1E-21 T 14-10-2018 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 SUPERFAMILY SSF47781 517 609 1.05E-19 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 SUPERFAMILY SSF82771 16 99 1.57E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DDU33_06910 ebbb2ebdd1e628642827317c3c27922a 611 Gene3D G3DSA:3.40.1440.10 3 101 4.4E-33 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 Gene3D G3DSA:2.40.30.160 164 286 5.4E-35 T 14-10-2018 DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 SUPERFAMILY SSF101790 212 292 3.2E-19 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 SUPERFAMILY SSF103025 14 210 1.44E-47 T 14-10-2018 DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 Pfam PF01571 Aminomethyltransferase folate-binding domain 20 111 1.9E-7 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 PIRSF PIRSF006487 144 257 3.5 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 PIRSF PIRSF006487 15 134 4.4E-9 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 Gene3D G3DSA:3.30.70.1400 22 108 6.3E-22 T 14-10-2018 DDU33_00435 0a320274350630b50eaa7b7e48e116c1 295 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 155 219 5.5E-22 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 51 450 1.3E-150 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 64 83 1.5E-32 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 1.5E-32 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 363 377 1.5E-32 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 289 311 1.5E-32 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 427 440 1.5E-32 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 SUPERFAMILY SSF56601 30 474 3.18E-96 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 39 471 3.7E-145 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 Gene3D G3DSA:3.50.80.20 93 188 3.5E-25 T 14-10-2018 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 Gene3D G3DSA:3.40.710.10 26 92 1.2E-7 T 14-10-2018 DDU33_09470 cfe3c553ce46a1d0808097cf5636de9a 479 Gene3D G3DSA:3.40.710.10 241 479 9.8E-63 T 14-10-2018 DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 Gene3D G3DSA:2.160.10.10 300 429 2.4E-32 T 14-10-2018 DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 395 1.6E-153 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 SUPERFAMILY SSF53448 16 376 3.29E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 Gene3D G3DSA:3.90.550.10 10 299 4.7E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 421 50.701 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 SUPERFAMILY SSF51161 318 408 1.66E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 210 220 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DDU33_08325 5bbeb51fa22a7f47bdbe2319195fca4d 436 Pfam PF00483 Nucleotidyl transferase 21 288 3.2E-64 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 Pfam PF00171 Aldehyde dehydrogenase family 6 290 5.5E-16 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 15 406 3.2E-174 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 SUPERFAMILY SSF53720 6 412 7.59E-111 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 Gene3D G3DSA:3.40.309.10 228 374 4.2E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 7 416 39.786 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 PIRSF PIRSF000151 1 417 5.8E-166 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DDU33_01215 7d21c9be5c7c11d07d4bfc336d418c4b 417 Gene3D G3DSA:3.40.605.10 20 411 4.2E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 9.3E-178 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 Gene3D G3DSA:3.40.50.300 90 285 1.8E-124 T 14-10-2018 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 SMART SM00962 100 296 8.1E-120 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 SMART SM00963 1 86 1.7E-35 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 SUPERFAMILY SSF52540 42 353 2.55E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 Gene3D G3DSA:1.20.120.140 4 305 1.8E-124 T 14-10-2018 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 Gene3D G3DSA:1.10.260.30 328 452 6.4E-44 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.6E-76 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 Pfam PF02978 Signal peptide binding domain 329 427 3.2E-32 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.8E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 SMART SM00382 99 301 2.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.673 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DDU33_02230 b502dc478d77e4a200d3d95bb2ef0d31 460 SUPERFAMILY SSF47446 328 430 2.45E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 Pfam PF07687 Peptidase dimerisation domain 207 268 4.3E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DDU33_06720 6d603429bf12ffae743833c12264dc80 482 Pfam PF01546 Peptidase family M20/M25/M40 72 477 1.2E-18 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 447 469 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 360 378 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 425 441 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PRINTS PR00934 X-His dipeptidase (M25) signature 250 269 2.7E-83 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 479 7.0E-183 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 SUPERFAMILY SSF53187 11 478 8.0E-61 T 14-10-2018 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 PIRSF PIRSF016599 1 482 1.8E-200 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 Gene3D G3DSA:3.40.630.10 1 240 3.3E-62 T 14-10-2018 DDU33_06720 6d603429bf12ffae743833c12264dc80 482 Gene3D G3DSA:3.40.630.10 371 480 4.0E-24 T 14-10-2018 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 120 131 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 Pfam PF08544 GHMP kinases C terminal 281 363 1.0E-13 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00473 Galactokinase signature 265 279 1.1E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00473 Galactokinase signature 90 101 1.1E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00473 Galactokinase signature 111 129 1.1E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00473 Galactokinase signature 27 45 1.1E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 Gene3D G3DSA:3.30.230.10 4 204 4.0E-61 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PIRSF PIRSF000530 3 384 1.7E-121 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00959 Mevalonate kinase family signature 25 49 6.3E-43 T 14-10-2018 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00959 Mevalonate kinase family signature 330 347 6.3E-43 T 14-10-2018 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00959 Mevalonate kinase family signature 118 140 6.3E-43 T 14-10-2018 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 PRINTS PR00959 Mevalonate kinase family signature 161 180 6.3E-43 T 14-10-2018 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 SUPERFAMILY SSF54211 7 201 9.11E-61 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 Gene3D G3DSA:3.30.70.890 205 383 2.5E-65 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 Hamap MF_00246 Galactokinase [galK]. 25 383 44.224 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 Pfam PF00288 GHMP kinases N terminal domain 113 180 2.0E-10 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 Pfam PF10509 Galactokinase galactose-binding signature 10 55 8.3E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 TIGRFAM TIGR00131 gal_kin: galactokinase 8 383 3.5E-153 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DDU33_10075 9e0331fdfeb54d6321506b16fe172f40 384 SUPERFAMILY SSF55060 204 384 6.12E-54 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 Gene3D G3DSA:3.90.55.10 82 615 1.1E-233 T 14-10-2018 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 Gene3D G3DSA:2.40.40.20 649 813 2.4E-45 T 14-10-2018 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 Gene3D G3DSA:3.40.50.740 86 569 1.1E-233 T 14-10-2018 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 SUPERFAMILY SSF50692 669 817 6.89E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 Pfam PF00384 Molybdopterin oxidoreductase 86 560 8.3E-77 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 SUPERFAMILY SSF53706 44 660 4.71E-167 T 14-10-2018 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 Gene3D G3DSA:3.40.228.10 179 641 1.1E-233 T 14-10-2018 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 3.7E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DDU33_03750 0ad3ff1cb3564bfdc0f24e35517ec8c3 821 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 820 0.0 T 14-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 DDU33_02050 db38bd28ceae8e58456eaaa584ba9ac4 367 Gene3D G3DSA:3.40.50.720 1 126 2.8E-32 T 14-10-2018 DDU33_02050 db38bd28ceae8e58456eaaa584ba9ac4 367 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.7E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDU33_02050 db38bd28ceae8e58456eaaa584ba9ac4 367 Gene3D G3DSA:3.30.360.10 127 367 2.7E-29 T 14-10-2018 DDU33_02050 db38bd28ceae8e58456eaaa584ba9ac4 367 SUPERFAMILY SSF55347 126 285 7.03E-24 T 14-10-2018 DDU33_02050 db38bd28ceae8e58456eaaa584ba9ac4 367 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 130 240 1.7E-20 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DDU33_02050 db38bd28ceae8e58456eaaa584ba9ac4 367 SUPERFAMILY SSF51735 2 146 1.83E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_04900 7f29da09922ae1eecd308dcfbc714011 212 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 50 195 1.7E-55 T 14-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 DDU33_04900 7f29da09922ae1eecd308dcfbc714011 212 SUPERFAMILY SSF48695 44 195 1.62E-26 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DDU33_04900 7f29da09922ae1eecd308dcfbc714011 212 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 93 147 2.4E-4 T 14-10-2018 IPR010177 Doubled CXXCH motif DDU33_04900 7f29da09922ae1eecd308dcfbc714011 212 Gene3D G3DSA:1.10.1130.10 111 200 2.1E-7 T 14-10-2018 DDU33_00630 53d91e42f73f9433bceb52825b2f8be3 271 SUPERFAMILY SSF56655 7 269 2.75E-69 T 14-10-2018 DDU33_00630 53d91e42f73f9433bceb52825b2f8be3 271 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 259 35.762 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DDU33_00630 53d91e42f73f9433bceb52825b2f8be3 271 Gene3D G3DSA:3.40.190.80 165 262 9.4E-22 T 14-10-2018 DDU33_00630 53d91e42f73f9433bceb52825b2f8be3 271 Gene3D G3DSA:3.30.540.10 4 157 2.0E-41 T 14-10-2018 DDU33_00630 53d91e42f73f9433bceb52825b2f8be3 271 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 256 2.0E-86 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DDU33_00630 53d91e42f73f9433bceb52825b2f8be3 271 Pfam PF00459 Inositol monophosphatase family 6 250 2.2E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_06225 bf895983d49558912254dea9e10c6944 868 SUPERFAMILY SSF53955 43 247 2.59E-73 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_06225 bf895983d49558912254dea9e10c6944 868 Pfam PF00912 Transglycosylase 55 227 1.6E-61 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_06225 bf895983d49558912254dea9e10c6944 868 Pfam PF17092 Penicillin-binding protein OB-like domain 315 408 1.5E-11 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_06225 bf895983d49558912254dea9e10c6944 868 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 776 1.1E-165 T 14-10-2018 DDU33_06225 bf895983d49558912254dea9e10c6944 868 SUPERFAMILY SSF56601 209 824 4.0E-108 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_06225 bf895983d49558912254dea9e10c6944 868 Gene3D G3DSA:3.40.710.10 384 596 2.8E-67 T 14-10-2018 DDU33_06225 bf895983d49558912254dea9e10c6944 868 Gene3D G3DSA:3.40.710.10 251 321 1.2E-5 T 14-10-2018 DDU33_06225 bf895983d49558912254dea9e10c6944 868 Gene3D G3DSA:3.40.710.10 636 828 1.5E-22 T 14-10-2018 DDU33_06225 bf895983d49558912254dea9e10c6944 868 Pfam PF00905 Penicillin binding protein transpeptidase domain 412 583 1.5E-22 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDU33_06225 bf895983d49558912254dea9e10c6944 868 Gene3D G3DSA:1.10.3810.10 49 244 7.3E-76 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_00030 1f8c0b2832145ad0bb69af8af4dc271e 181 Gene3D G3DSA:3.30.420.10 1 181 1.5E-75 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_00030 1f8c0b2832145ad0bb69af8af4dc271e 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.291 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 DDU33_00030 1f8c0b2832145ad0bb69af8af4dc271e 181 SUPERFAMILY SSF53098 4 180 2.73E-46 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_00030 1f8c0b2832145ad0bb69af8af4dc271e 181 SMART SM00479 7 180 1.3E-25 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDU33_00030 1f8c0b2832145ad0bb69af8af4dc271e 181 Pfam PF00929 Exonuclease 9 170 1.3E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 Gene3D G3DSA:3.40.630.10 181 497 3.9E-135 T 14-10-2018 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.9E-34 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 Gene3D G3DSA:3.40.220.10 1 159 1.8E-54 T 14-10-2018 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 488 1.3E-121 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 SUPERFAMILY SSF52949 1 184 2.24E-51 T 14-10-2018 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.356 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DDU33_06115 7ff48ed5a03d9ddfc2e45db8020ff9fe 498 SUPERFAMILY SSF53187 180 494 6.28E-122 T 14-10-2018 DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 Pfam PF00005 ABC transporter 22 171 2.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 Pfam PF00005 ABC transporter 273 427 8.5E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 SMART SM00382 31 218 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 SMART SM00382 281 476 0.66 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 Gene3D G3DSA:3.40.50.300 255 495 5.1E-38 T 14-10-2018 DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 SUPERFAMILY SSF52540 245 479 2.51E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 Gene3D G3DSA:3.40.50.300 1 249 1.4E-55 T 14-10-2018 DDU33_00230 357bd23d36f27ff25f525bef796f7846 499 SUPERFAMILY SSF52540 5 228 1.95E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01555 bbdd42d8e2898b14064d539fc556913d 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 312 7.6E-106 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DDU33_01555 bbdd42d8e2898b14064d539fc556913d 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 287 3.2E-111 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DDU33_01555 bbdd42d8e2898b14064d539fc556913d 328 PIRSF PIRSF006470 1 328 1.9E-117 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DDU33_01555 bbdd42d8e2898b14064d539fc556913d 328 SUPERFAMILY SSF53850 72 267 5.31E-5 T 14-10-2018 DDU33_01555 bbdd42d8e2898b14064d539fc556913d 328 Gene3D G3DSA:3.40.190.170 24 326 1.1E-104 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DDU33_01095 efbdda9f4205717960c645109a19aa9e 94 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.2E-29 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DDU33_01095 efbdda9f4205717960c645109a19aa9e 94 SUPERFAMILY SSF50182 7 69 4.62E-24 T 14-10-2018 IPR010920 LSM domain superfamily DDU33_01095 efbdda9f4205717960c645109a19aa9e 94 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.307 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DDU33_01095 efbdda9f4205717960c645109a19aa9e 94 Gene3D G3DSA:2.30.30.100 1 72 5.8E-33 T 14-10-2018 DDU33_01095 efbdda9f4205717960c645109a19aa9e 94 Pfam PF17209 Hfq protein 7 68 2.6E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DDU33_04860 12bf2cc074fc36c37bea1a8d7e1a86ad 90 Pfam PF00708 Acylphosphatase 5 88 1.4E-26 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDU33_04860 12bf2cc074fc36c37bea1a8d7e1a86ad 90 Gene3D G3DSA:3.30.70.100 1 89 1.1E-29 T 14-10-2018 DDU33_04860 12bf2cc074fc36c37bea1a8d7e1a86ad 90 PRINTS PR00112 Acylphosphatase signature 24 49 2.0E-8 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDU33_04860 12bf2cc074fc36c37bea1a8d7e1a86ad 90 PRINTS PR00112 Acylphosphatase signature 3 18 2.0E-8 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDU33_04860 12bf2cc074fc36c37bea1a8d7e1a86ad 90 SUPERFAMILY SSF54975 1 89 4.14E-27 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDU33_04860 12bf2cc074fc36c37bea1a8d7e1a86ad 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDU33_04860 12bf2cc074fc36c37bea1a8d7e1a86ad 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 Pfam PF00696 Amino acid kinase family 1 287 1.0E-21 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PIRSF PIRSF000723 1 306 5.6E-109 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 Gene3D G3DSA:3.40.1160.10 1 307 9.8E-109 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_04565 d319487a27686f7953fbe1e86819407c 314 TIGRFAM TIGR00746 arcC: carbamate kinase 1 305 3.6E-116 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 SUPERFAMILY SSF53633 1 304 1.57E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PRINTS PR01469 Bacterial carbamate kinase signature 154 173 6.4E-58 T 14-10-2018 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PRINTS PR01469 Bacterial carbamate kinase signature 261 276 6.4E-58 T 14-10-2018 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 6.4E-58 T 14-10-2018 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PRINTS PR01469 Bacterial carbamate kinase signature 208 223 6.4E-58 T 14-10-2018 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 6.4E-58 T 14-10-2018 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 6.4E-58 T 14-10-2018 DDU33_04565 d319487a27686f7953fbe1e86819407c 314 PRINTS PR01469 Bacterial carbamate kinase signature 177 195 6.4E-58 T 14-10-2018 DDU33_07445 eb0fef8f3776ea9384b05cd37b4711b6 126 PIRSF PIRSF006318 2 126 1.3E-43 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 DDU33_07445 eb0fef8f3776ea9384b05cd37b4711b6 126 Pfam PF06295 Protein of unknown function (DUF1043) 15 125 1.2E-38 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 5.4E-48 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 SUPERFAMILY SSF54913 226 298 5.0E-22 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 6.1E-57 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 Gene3D G3DSA:3.40.190.10 7 220 2.2E-73 T 14-10-2018 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.725 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 SUPERFAMILY SSF53850 6 223 1.1E-69 T 14-10-2018 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 Gene3D G3DSA:3.40.190.10 102 191 2.2E-73 T 14-10-2018 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.1E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 Gene3D G3DSA:3.30.70.120 226 299 6.5E-35 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DDU33_00350 7100fa2da7183a2a5e942f9baf9907fb 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 205 298 2.6E-30 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 Gene3D G3DSA:1.10.287.40 1 105 3.1E-18 T 14-10-2018 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 427 3.5E-178 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 232 410 2.3E-36 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 432 41.231 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 SUPERFAMILY SSF46589 1 113 1.88E-27 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 SUPERFAMILY SSF55681 117 428 1.99E-98 T 14-10-2018 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 PIRSF PIRSF001529 1 435 6.4E-182 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 Gene3D G3DSA:3.30.930.10 106 435 2.5E-115 T 14-10-2018 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 2.1E-28 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 286 299 1.2E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 343 359 1.2E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 326 339 1.2E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 361 377 1.2E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_09125 fef3f5a1945051473f013740c782acd6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 274 286 1.2E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 SUPERFAMILY SSF51206 23 151 5.24E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 ProSitePatterns PS00042 Crp-type HTH domain signature. 182 205 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 Pfam PF00325 Bacterial regulatory proteins, crp family 180 211 3.1E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 84 103 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 SMART SM00419 174 222 2.9E-18 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 211 6.0E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 196 6.0E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 43 59 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 SMART SM00100 16 136 2.4E-22 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 Gene3D G3DSA:2.60.120.10 24 152 5.5E-40 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 SUPERFAMILY SSF46785 153 221 1.62E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 Pfam PF00027 Cyclic nucleotide-binding domain 35 121 8.1E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DDU33_01235 8e650c4fcdbcfc179b070ab279e1b4a7 228 Gene3D G3DSA:1.10.10.10 153 221 5.0E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_05695 1f9c128d7d6f3f4330818143e18a75a8 328 Gene3D G3DSA:3.20.20.140 22 327 2.7E-57 T 14-10-2018 DDU33_05695 1f9c128d7d6f3f4330818143e18a75a8 328 ProDom PD049525 CYTOSINE HI0843 HYDROLASE RELATED METAL-DEPENDENT DEAMINASE HYDROLASES PM1882 286 327 5.0E-18 T 14-10-2018 DDU33_05695 1f9c128d7d6f3f4330818143e18a75a8 328 SUPERFAMILY SSF51556 21 327 1.29E-63 T 14-10-2018 IPR032466 Metal-dependent hydrolase DDU33_05695 1f9c128d7d6f3f4330818143e18a75a8 328 Pfam PF01979 Amidohydrolase family 21 327 1.1E-9 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 Pfam PF13183 4Fe-4S dicluster domain 27 91 1.1E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 30 41 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 24 422 1.5E-218 T 14-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 SUPERFAMILY SSF46548 16 112 9.24E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 Gene3D G3DSA:1.10.1060.10 4 114 2.0E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 Pfam PF02754 Cysteine-rich domain 320 404 2.2E-15 T 14-10-2018 IPR004017 Cysteine-rich domain DDU33_03345 d134a62397c7a9f0199b0bce4f810128 424 Pfam PF02754 Cysteine-rich domain 190 276 4.2E-14 T 14-10-2018 IPR004017 Cysteine-rich domain DDU33_00335 de09f16d207b62901177fbca50206084 350 Gene3D G3DSA:3.40.640.10 51 254 3.2E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_00335 de09f16d207b62901177fbca50206084 350 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 350 53.193 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DDU33_00335 de09f16d207b62901177fbca50206084 350 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 348 5.1E-121 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DDU33_00335 de09f16d207b62901177fbca50206084 350 SUPERFAMILY SSF53383 6 349 2.55E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_00335 de09f16d207b62901177fbca50206084 350 Pfam PF00155 Aminotransferase class I and II 45 347 3.3E-57 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDU33_00335 de09f16d207b62901177fbca50206084 350 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DDU33_00335 de09f16d207b62901177fbca50206084 350 Gene3D G3DSA:3.90.1150.10 6 342 3.2E-126 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 SUPERFAMILY SSF54713 142 279 4.71E-49 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 Gene3D G3DSA:1.10.8.10 1 56 2.6E-27 T 14-10-2018 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 SUPERFAMILY SSF54713 56 139 7.19E-21 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 3.2E-114 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 Gene3D G3DSA:3.30.479.20 57 141 4.9E-28 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 SUPERFAMILY SSF46934 4 54 1.53E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 78.836 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 Pfam PF00889 Elongation factor TS 71 262 2.0E-64 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DDU33_08755 57a4df5f34ede2b2625c8386b0ab0811 281 Gene3D G3DSA:1.10.286.20 186 225 3.8E-23 T 14-10-2018 DDU33_01605 079da60b2640022ea8336890691998d6 214 Pfam PF13500 AAA domain 5 182 2.0E-28 T 14-10-2018 DDU33_01605 079da60b2640022ea8336890691998d6 214 Gene3D G3DSA:3.40.50.300 2 206 6.7E-56 T 14-10-2018 DDU33_01605 079da60b2640022ea8336890691998d6 214 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 210 24.973 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDU33_01605 079da60b2640022ea8336890691998d6 214 PIRSF PIRSF006755 3 207 1.3E-60 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDU33_01605 079da60b2640022ea8336890691998d6 214 SUPERFAMILY SSF52540 1 195 2.98E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01605 079da60b2640022ea8336890691998d6 214 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 176 1.3E-50 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDU33_07990 b798de111ec025b905b3ba186727eb53 463 TIGRFAM TIGR03606 non_repeat_PQQ: dehydrogenase, PQQ-dependent, s-GDH family 26 461 1.1E-161 T 14-10-2018 IPR019893 PQQ-dependent dehydrogenase, s-GDH family KEGG: 00030+1.1.5.2|MetaCyc: PWY-7165 DDU33_07990 b798de111ec025b905b3ba186727eb53 463 Gene3D G3DSA:2.120.10.30 19 463 3.7E-135 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DDU33_07990 b798de111ec025b905b3ba186727eb53 463 SUPERFAMILY SSF50952 29 441 7.32E-37 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DDU33_07990 b798de111ec025b905b3ba186727eb53 463 Pfam PF07995 Glucose / Sorbosone dehydrogenase 356 437 5.5E-8 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase DDU33_07990 b798de111ec025b905b3ba186727eb53 463 Pfam PF07995 Glucose / Sorbosone dehydrogenase 41 299 2.2E-48 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase DDU33_09740 ddf1f4312897a5d146ad56b806478786 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 473 5.0E-33 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DDU33_09740 ddf1f4312897a5d146ad56b806478786 506 Gene3D G3DSA:3.60.110.10 219 476 3.3E-17 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DDU33_09740 ddf1f4312897a5d146ad56b806478786 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 62 449 5.3E-100 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DDU33_09740 ddf1f4312897a5d146ad56b806478786 506 SUPERFAMILY SSF56317 215 479 3.92E-43 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DDU33_09740 ddf1f4312897a5d146ad56b806478786 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 9 487 23.075 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 Gene3D G3DSA:3.40.50.720 97 288 9.6E-106 T 14-10-2018 DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 30 314 3.3E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 SUPERFAMILY SSF52283 24 119 1.89E-29 T 14-10-2018 DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 Gene3D G3DSA:3.40.50.720 24 312 9.6E-106 T 14-10-2018 DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 SUPERFAMILY SSF51735 102 290 7.81E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 289 1.9E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDU33_00185 70c78b9b40edbd51a24cf9d04e665599 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 Gene3D G3DSA:3.30.420.40 13 379 2.1E-99 T 14-10-2018 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 424 25.949 T 14-10-2018 IPR020823 Cell division protein FtsA DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 SUPERFAMILY SSF53067 197 383 4.07E-42 T 14-10-2018 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 PIRSF PIRSF003101 1 424 8.0E-130 T 14-10-2018 IPR020823 Cell division protein FtsA DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 SUPERFAMILY SSF53067 8 196 3.96E-50 T 14-10-2018 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 Pfam PF02491 SHS2 domain inserted in FTSA 85 160 3.7E-21 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 384 9.5E-131 T 14-10-2018 IPR020823 Cell division protein FtsA DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 Gene3D G3DSA:3.90.640.10 234 300 2.1E-99 T 14-10-2018 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 SMART SM00842 10 195 9.8E-82 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 Pfam PF14450 Cell division protein FtsA 206 381 7.2E-24 T 14-10-2018 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 Gene3D G3DSA:3.30.420.40 196 359 2.1E-99 T 14-10-2018 DDU33_04350 dd5bb2786ec919f2de4f6ea5888820d8 424 Gene3D G3DSA:3.30.1490.110 85 168 2.1E-99 T 14-10-2018 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 TIGRFAM TIGR00033 aroC: chorismate synthase 10 356 4.1E-143 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 PIRSF PIRSF001456 3 360 1.5E-145 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 SUPERFAMILY SSF103263 4 359 7.72E-149 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 Gene3D G3DSA:3.60.150.10 1 360 3.1E-158 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 Hamap MF_00300 Chorismate synthase [aroC]. 10 360 37.769 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 ProSitePatterns PS00789 Chorismate synthase signature 3. 327 343 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_08720 23aac4a92e036801a055d2d7b029f13f 360 Pfam PF01264 Chorismate synthase 10 353 1.5E-143 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DDU33_03745 b06d499685e4560e64271d119ad46adc 195 SUPERFAMILY SSF89155 7 194 8.24E-34 T 14-10-2018 IPR036411 TorD-like superfamily DDU33_03745 b06d499685e4560e64271d119ad46adc 195 Gene3D G3DSA:1.20.120.1820 2 122 1.4E-30 T 14-10-2018 DDU33_03745 b06d499685e4560e64271d119ad46adc 195 Gene3D G3DSA:1.20.1280.20 125 195 2.3E-11 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_03745 b06d499685e4560e64271d119ad46adc 195 Pfam PF02613 Nitrate reductase delta subunit 58 165 1.3E-24 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone DDU33_01265 23f507d3753c0cfbde7c89b8f8ef4a29 221 Gene3D G3DSA:3.40.140.10 94 218 7.3E-47 T 14-10-2018 DDU33_01265 23f507d3753c0cfbde7c89b8f8ef4a29 221 TIGRFAM TIGR00608 radc: DNA repair protein RadC 6 216 1.4E-81 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 DDU33_01265 23f507d3753c0cfbde7c89b8f8ef4a29 221 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 168 173 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DDU33_01265 23f507d3753c0cfbde7c89b8f8ef4a29 221 SUPERFAMILY SSF47781 13 85 2.0E-9 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_01265 23f507d3753c0cfbde7c89b8f8ef4a29 221 Pfam PF04002 RadC-like JAB domain 99 217 3.1E-46 T 14-10-2018 IPR025657 RadC-like JAB domain DDU33_01265 23f507d3753c0cfbde7c89b8f8ef4a29 221 SUPERFAMILY SSF102712 139 189 7.85E-7 T 14-10-2018 DDU33_00530 12fb0f9cb7adf58985f9366094eb6e63 114 SUPERFAMILY SSF55298 10 114 7.38E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DDU33_00530 12fb0f9cb7adf58985f9366094eb6e63 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 DDU33_00530 12fb0f9cb7adf58985f9366094eb6e63 114 Pfam PF01042 Endoribonuclease L-PSP 2 113 6.2E-29 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DDU33_00530 12fb0f9cb7adf58985f9366094eb6e63 114 Gene3D G3DSA:3.30.1330.40 1 114 6.9E-39 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DDU33_09990 476914be4a9a88d4ac50b34542d4176a 491 SMART SM00316 38 123 1.6E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_09990 476914be4a9a88d4ac50b34542d4176a 491 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 427 9.4E-170 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DDU33_09990 476914be4a9a88d4ac50b34542d4176a 491 SUPERFAMILY SSF50249 40 129 4.33E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_09990 476914be4a9a88d4ac50b34542d4176a 491 Pfam PF10150 Ribonuclease E/G family 125 394 5.4E-100 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DDU33_09990 476914be4a9a88d4ac50b34542d4176a 491 Gene3D G3DSA:2.40.50.140 32 128 7.9E-32 T 14-10-2018 DDU33_09990 476914be4a9a88d4ac50b34542d4176a 491 Gene3D G3DSA:3.40.1260.20 404 491 2.4E-10 T 14-10-2018 DDU33_09990 476914be4a9a88d4ac50b34542d4176a 491 Pfam PF00575 S1 RNA binding domain 39 110 1.8E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_09120 a8e2f535ee6fb654eec811d38e8cab5c 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 5.0E-53 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DDU33_09120 a8e2f535ee6fb654eec811d38e8cab5c 159 Pfam PF01668 SmpB protein 12 155 6.0E-57 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DDU33_09120 a8e2f535ee6fb654eec811d38e8cab5c 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 154 5.3E-53 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DDU33_09120 a8e2f535ee6fb654eec811d38e8cab5c 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 73.148 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DDU33_09120 a8e2f535ee6fb654eec811d38e8cab5c 159 SUPERFAMILY SSF74982 7 136 1.96E-49 T 14-10-2018 IPR023620 Small protein B DDU33_09120 a8e2f535ee6fb654eec811d38e8cab5c 159 Gene3D G3DSA:2.40.280.10 5 133 1.3E-45 T 14-10-2018 IPR023620 Small protein B DDU33_09120 a8e2f535ee6fb654eec811d38e8cab5c 159 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site DDU33_01645 66f8c32e5bb69d5896c8480497e3fdbe 425 SUPERFAMILY SSF53254 36 418 2.8E-56 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_01645 66f8c32e5bb69d5896c8480497e3fdbe 425 Gene3D G3DSA:3.40.50.1240 38 411 1.7E-113 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_01645 66f8c32e5bb69d5896c8480497e3fdbe 425 Gene3D G3DSA:3.40.50.1240 53 284 1.7E-113 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_01645 66f8c32e5bb69d5896c8480497e3fdbe 425 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 39 370 7.6E-14 T 14-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 DDU33_01645 66f8c32e5bb69d5896c8480497e3fdbe 425 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 312 328 - T 14-10-2018 IPR033379 Histidine acid phosphatase active site DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 217 3.4E-61 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 190 4.0E-34 T 14-10-2018 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 Gene3D G3DSA:3.40.50.1000 8 213 1.8E-62 T 14-10-2018 IPR023214 HAD superfamily DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 4.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 4.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 4.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 4.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 188 2.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 5 221 34.645 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 185 9.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 Gene3D G3DSA:1.10.150.240 20 90 1.8E-62 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 ProSitePatterns PS01228 Hypothetical cof family signature 1. 7 18 - T 14-10-2018 DDU33_03675 ea48aaa85583204e89f827ad287f5311 224 SUPERFAMILY SSF56784 3 222 1.16E-58 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_01805 14c8d87219bc0d05a2cd6eb9ab54dfd2 93 Pfam PF01192 RNA polymerase Rpb6 11 59 2.2E-14 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DDU33_01805 14c8d87219bc0d05a2cd6eb9ab54dfd2 93 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.633 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_01805 14c8d87219bc0d05a2cd6eb9ab54dfd2 93 SMART SM01409 8 61 4.8E-13 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DDU33_01805 14c8d87219bc0d05a2cd6eb9ab54dfd2 93 Gene3D G3DSA:3.90.940.10 1 91 1.5E-23 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DDU33_01805 14c8d87219bc0d05a2cd6eb9ab54dfd2 93 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-26 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_01805 14c8d87219bc0d05a2cd6eb9ab54dfd2 93 SUPERFAMILY SSF63562 1 73 1.27E-21 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DDU33_03375 a6833b758763de36101dc9d1f6830221 308 Gene3D G3DSA:3.40.50.720 3 302 3.0E-113 T 14-10-2018 DDU33_03375 a6833b758763de36101dc9d1f6830221 308 Gene3D G3DSA:3.90.25.10 168 290 3.0E-113 T 14-10-2018 DDU33_03375 a6833b758763de36101dc9d1f6830221 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 2.5E-44 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDU33_03375 a6833b758763de36101dc9d1f6830221 308 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 308 45.612 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DDU33_03375 a6833b758763de36101dc9d1f6830221 308 SUPERFAMILY SSF51735 1 306 1.66E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_03375 a6833b758763de36101dc9d1f6830221 308 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 307 8.3E-131 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DDU33_00740 c2e7e8c49419ffbbc65552c0b2c7babd 174 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 24 160 1.1E-15 T 14-10-2018 IPR018958 Knr4/Smi1-like domain DDU33_00740 c2e7e8c49419ffbbc65552c0b2c7babd 174 Gene3D G3DSA:3.40.1580.10 5 166 1.5E-19 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily DDU33_00740 c2e7e8c49419ffbbc65552c0b2c7babd 174 SMART SM00860 19 161 5.3E-7 T 14-10-2018 IPR018958 Knr4/Smi1-like domain DDU33_00740 c2e7e8c49419ffbbc65552c0b2c7babd 174 SUPERFAMILY SSF160631 12 162 1.31E-16 T 14-10-2018 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 Gene3D G3DSA:1.20.1250.20 211 411 1.4E-62 T 14-10-2018 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 292 318 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 76 105 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 153 171 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 222 250 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 323 342 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 354 374 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 268 289 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 PRINTS PR00174 LacY proton/sugar symporter family signature 111 133 1.2E-95 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 Gene3D G3DSA:1.20.1250.20 10 210 1.7E-43 T 14-10-2018 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 SUPERFAMILY SSF103473 14 410 2.53E-46 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 14 408 1.8E-171 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_10090 7e2f585014f69b760a7b44bb06db2d2a 428 Pfam PF01306 LacY proton/sugar symporter 11 413 1.9E-169 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 DDU33_02170 9c3521aaecfd0b58f5f0c860fe4f167e 87 Gene3D G3DSA:1.20.58.110 1 87 4.4E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02170 9c3521aaecfd0b58f5f0c860fe4f167e 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 4.8E-33 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02170 9c3521aaecfd0b58f5f0c860fe4f167e 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 1.0E-33 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02170 9c3521aaecfd0b58f5f0c860fe4f167e 87 SUPERFAMILY SSF46992 3 86 1.31E-31 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02170 9c3521aaecfd0b58f5f0c860fe4f167e 87 Pfam PF01649 Ribosomal protein S20 2 84 2.7E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02170 9c3521aaecfd0b58f5f0c860fe4f167e 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.897 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08990 c1876996e8d90b6449019539322d5e6a 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 41 220 1.8E-84 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDU33_08990 c1876996e8d90b6449019539322d5e6a 221 Gene3D G3DSA:1.10.286.10 1 87 2.9E-33 T 14-10-2018 DDU33_08990 c1876996e8d90b6449019539322d5e6a 221 Pfam PF01227 GTP cyclohydrolase I 41 219 1.4E-63 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDU33_08990 c1876996e8d90b6449019539322d5e6a 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 37 220 34.321 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDU33_08990 c1876996e8d90b6449019539322d5e6a 221 Gene3D G3DSA:3.30.1130.10 88 221 5.4E-53 T 14-10-2018 DDU33_08990 c1876996e8d90b6449019539322d5e6a 221 SUPERFAMILY SSF55620 12 220 2.89E-74 T 14-10-2018 DDU33_08990 c1876996e8d90b6449019539322d5e6a 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 99 115 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Gene3D G3DSA:3.40.120.10 170 252 6.7E-28 T 14-10-2018 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 2.0E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 4.9E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 4.9E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 4.9E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 4.9E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 SUPERFAMILY SSF53738 151 259 1.1E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Gene3D G3DSA:3.30.310.50 372 452 1.3E-26 T 14-10-2018 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Gene3D G3DSA:3.40.120.10 253 370 3.4E-34 T 14-10-2018 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 SUPERFAMILY SSF53738 3 173 4.71E-39 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 SUPERFAMILY SSF55957 370 452 1.71E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 371 1.1E-21 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 450 4.8E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Gene3D G3DSA:3.40.120.10 2 147 4.6E-51 T 14-10-2018 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 SUPERFAMILY SSF53738 261 365 3.61E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_09150 c1fd8fbe2e161d35d1b562eaeca8513e 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 133 8.4E-33 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_03775 bd9d76af33ec1b3fe19dc94a12081cc2 60 Gene3D G3DSA:3.30.920.30 1 59 3.7E-30 T 14-10-2018 IPR038570 HicA superfamily DDU33_03775 bd9d76af33ec1b3fe19dc94a12081cc2 60 SUPERFAMILY SSF54786 1 59 2.2E-19 T 14-10-2018 DDU33_03775 bd9d76af33ec1b3fe19dc94a12081cc2 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 4.6E-23 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 DDU33_01015 8d0bcbb80a194cc0956c617bebf46f3b 87 Hamap MF_02200 Chaperone NapD [napD]. 10 87 17.106 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly DDU33_01015 8d0bcbb80a194cc0956c617bebf46f3b 87 Gene3D G3DSA:3.30.70.920 10 80 3.5E-25 T 14-10-2018 DDU33_01015 8d0bcbb80a194cc0956c617bebf46f3b 87 Pfam PF03927 NapD protein 10 86 1.3E-23 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly DDU33_03010 e31c9315c99a4ecf7ac9669b55cbf08c 205 Pfam PF01545 Cation efflux family 23 201 4.6E-15 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DDU33_03010 e31c9315c99a4ecf7ac9669b55cbf08c 205 Gene3D G3DSA:1.20.1510.10 19 201 1.5E-11 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DDU33_03010 e31c9315c99a4ecf7ac9669b55cbf08c 205 SUPERFAMILY SSF161111 17 202 3.27E-37 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DDU33_07340 44029439ec61cf8364645660bffd56af 572 Gene3D G3DSA:3.30.565.10 435 568 2.3E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_07340 44029439ec61cf8364645660bffd56af 572 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 37 133 4.6E-18 T 14-10-2018 IPR029095 NarX-like, N-terminal DDU33_07340 44029439ec61cf8364645660bffd56af 572 SUPERFAMILY SSF158472 181 231 3.01E-5 T 14-10-2018 DDU33_07340 44029439ec61cf8364645660bffd56af 572 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 566 7.5E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_07340 44029439ec61cf8364645660bffd56af 572 Gene3D G3DSA:1.10.287.130 178 279 3.5E-5 T 14-10-2018 DDU33_07340 44029439ec61cf8364645660bffd56af 572 PIRSF PIRSF003167 305 572 3.7E-95 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 DDU33_07340 44029439ec61cf8364645660bffd56af 572 PIRSF PIRSF003167 3 313 5.5E-62 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 DDU33_07340 44029439ec61cf8364645660bffd56af 572 SUPERFAMILY SSF55874 441 566 4.58E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_07340 44029439ec61cf8364645660bffd56af 572 Pfam PF07730 Histidine kinase 369 434 4.6E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DDU33_07340 44029439ec61cf8364645660bffd56af 572 SMART SM00387 475 569 7.4E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_07340 44029439ec61cf8364645660bffd56af 572 Gene3D G3DSA:1.20.120.960 43 152 8.4E-10 T 14-10-2018 DDU33_07340 44029439ec61cf8364645660bffd56af 572 SMART SM00304 180 233 0.0092 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DDU33_00750 49d9a1855fb28648968b7834af24b864 567 Pfam PF17287 POTRA domain 165 207 3.5E-13 T 14-10-2018 IPR035251 ShlB, POTRA domain DDU33_00750 49d9a1855fb28648968b7834af24b864 567 Pfam PF08479 POTRA domain, ShlB-type 84 148 3.7E-13 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type DDU33_00750 49d9a1855fb28648968b7834af24b864 567 PIRSF PIRSF029745 16 567 5.6E-145 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 DDU33_00750 49d9a1855fb28648968b7834af24b864 567 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 213 531 5.6E-110 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal DDU33_00750 49d9a1855fb28648968b7834af24b864 567 Gene3D G3DSA:2.40.160.50 184 567 3.1E-104 T 14-10-2018 DDU33_09505 d0376524c3fab32b2cd28e6d4a20f2b6 131 Pfam PF01641 SelR domain 7 121 3.3E-47 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DDU33_09505 d0376524c3fab32b2cd28e6d4a20f2b6 131 Gene3D G3DSA:2.170.150.20 2 130 2.4E-53 T 14-10-2018 DDU33_09505 d0376524c3fab32b2cd28e6d4a20f2b6 131 SUPERFAMILY SSF51316 6 126 2.72E-52 T 14-10-2018 IPR011057 Mss4-like superfamily DDU33_09505 d0376524c3fab32b2cd28e6d4a20f2b6 131 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 129 8.1E-48 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 Pfam PF02780 Transketolase, C-terminal domain 492 608 6.2E-25 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 SUPERFAMILY SSF52922 489 616 2.75E-31 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 SUPERFAMILY SSF52518 4 379 3.57E-80 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 Gene3D G3DSA:3.40.50.970 315 489 3.3E-70 T 14-10-2018 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 Gene3D G3DSA:3.40.50.920 492 617 6.4E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 SMART SM00861 317 481 2.6E-70 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 281 4.6E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 SUPERFAMILY SSF52518 315 501 8.39E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 ProSitePatterns PS00801 Transketolase signature 1. 33 52 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 Pfam PF02779 Transketolase, pyrimidine binding domain 317 478 4.2E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 616 0.0 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_08905 07836fd623fa845b1d08975d2fb23942 617 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 7 617 45.806 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_09185 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_09185 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_09185 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_09185 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_09185 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_09185 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_09185 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_09725 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_09725 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_09725 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_09725 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_09725 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_09725 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_09725 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_07520 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_07520 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_07520 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_07520 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_07520 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_07520 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_07520 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_02945 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_02945 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_02945 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_02945 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_02945 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_02945 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_02945 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_00705 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_00705 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_00705 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_00705 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_00705 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_00705 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_00705 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_05725 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_05725 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_05725 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_05725 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_05725 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_05725 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_05725 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_05865 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_05865 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_05865 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_05865 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_05865 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_05865 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_05865 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_06855 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_06855 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_06855 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_06855 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_06855 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_06855 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_06855 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_01560 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_01560 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_01560 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_01560 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_01560 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_01560 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_01560 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_02955 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF46689 4 118 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_02955 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF00665 Integrase core domain 175 277 8.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DDU33_02955 a789a7665c2ae276caa813f39fb463bb 324 SUPERFAMILY SSF53098 174 322 4.4E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_02955 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:1.10.10.60 2 52 4.9E-6 T 14-10-2018 DDU33_02955 a789a7665c2ae276caa813f39fb463bb 324 Pfam PF13936 Helix-turn-helix domain 5 48 6.4E-18 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain DDU33_02955 a789a7665c2ae276caa813f39fb463bb 324 ProSitePatterns PS01043 Transposases, IS30 family, signature. 264 280 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 DDU33_02955 a789a7665c2ae276caa813f39fb463bb 324 Gene3D G3DSA:3.30.420.10 175 323 2.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 SUPERFAMILY SSF51569 3 293 3.45E-96 T 14-10-2018 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 Pfam PF00701 Dihydrodipicolinate synthetase family 6 292 2.6E-113 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 Gene3D G3DSA:3.20.20.70 5 295 6.2E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 291 6.4E-116 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 291 63.231 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 PIRSF PIRSF001365 1 295 2.9E-92 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 2.2E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.2E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 2.2E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.2E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_08915 eadbe606d29ada016699a7a411426f5f 295 SMART SM01130 5 293 4.6E-136 T 14-10-2018 IPR002220 DapA-like GO:0016829 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 SMART SM00530 9 65 3.6E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 Pfam PF13521 AAA domain 237 397 1.5E-29 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 67 398 5.0E-149 T 14-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 Gene3D G3DSA:3.40.50.300 234 402 1.7E-58 T 14-10-2018 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 SUPERFAMILY SSF52374 66 227 3.94E-23 T 14-10-2018 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 Gene3D G3DSA:3.40.50.620 65 233 2.6E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 Gene3D G3DSA:1.10.260.40 8 63 6.5E-6 T 14-10-2018 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 68 137 7.6E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 SUPERFAMILY SSF52540 234 401 2.61E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 SUPERFAMILY SSF47413 5 60 6.52E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_05210 4cb2158719b8b55f9f86fe6bbb18d4a4 431 PIRSF PIRSF004776 6 417 4.7E-178 T 14-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 DDU33_08360 fee57378732091c952a77be270d43568 300 Pfam PF05726 Pirin C-terminal cupin domain 173 275 8.6E-22 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DDU33_08360 fee57378732091c952a77be270d43568 300 Pfam PF02678 Pirin 18 122 1.8E-26 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DDU33_08360 fee57378732091c952a77be270d43568 300 SUPERFAMILY SSF51182 9 277 1.56E-59 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DDU33_08360 fee57378732091c952a77be270d43568 300 Gene3D G3DSA:2.60.120.10 3 249 9.3E-55 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_08360 fee57378732091c952a77be270d43568 300 PIRSF PIRSF006232 1 281 2.6E-65 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.163 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 9.0E-31 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 SUPERFAMILY SSF81333 3 78 9.68E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 Gene3D G3DSA:1.20.20.10 1 77 2.5E-26 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03185 aab928ef2903ec66f04cd6c94288489f 84 Pfam PF00137 ATP synthase subunit C 10 72 1.1E-8 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 Pfam PF00117 Glutamine amidotransferase class-I 7 192 3.4E-34 T 14-10-2018 IPR017926 Glutamine amidotransferase DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 5 192 9.1E-39 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.6E-25 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00097 Anthranilate synthase component II signature 171 184 1.6E-25 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.6E-25 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.6E-25 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00097 Anthranilate synthase component II signature 5 19 1.6E-25 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00097 Anthranilate synthase component II signature 125 137 1.6E-25 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.0E-11 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.0E-11 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 2.0E-11 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 Gene3D G3DSA:3.40.50.880 2 193 1.4E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 96 113 1.0E-4 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.0E-4 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.0E-4 T 14-10-2018 DDU33_04955 3dc836521b9d65438b858a52a5e3eec3 194 SUPERFAMILY SSF52317 2 192 5.82E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 SUPERFAMILY SSF48300 4 58 1.31E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 4.1E-47 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 SUPERFAMILY SSF54736 51 122 4.71E-25 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 Gene3D G3DSA:3.30.1390.10 52 122 6.2E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 7.8E-31 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 25.559 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 Gene3D G3DSA:1.20.5.710 2 51 1.2E-22 T 14-10-2018 DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 101 2.0E-16 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03425 8df12e7b62dd4a34db94012002ce10d2 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 2.9E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01990 29a02fa50d10f6cb8bd4a0fc1b6b36ac 330 Gene3D G3DSA:3.30.930.10 1 330 3.5E-147 T 14-10-2018 DDU33_01990 29a02fa50d10f6cb8bd4a0fc1b6b36ac 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 3.8E-198 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DDU33_01990 29a02fa50d10f6cb8bd4a0fc1b6b36ac 330 SUPERFAMILY SSF55681 5 330 3.25E-99 T 14-10-2018 DDU33_01990 29a02fa50d10f6cb8bd4a0fc1b6b36ac 330 PIRSF PIRSF001555 1 330 1.2E-157 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DDU33_01990 29a02fa50d10f6cb8bd4a0fc1b6b36ac 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.908 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DDU33_01990 29a02fa50d10f6cb8bd4a0fc1b6b36ac 330 Pfam PF03590 Aspartate-ammonia ligase 9 243 4.0E-94 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DDU33_00555 1443a3c34003971218cc076719517097 430 SUPERFAMILY SSF56059 104 323 2.3E-67 T 14-10-2018 DDU33_00555 1443a3c34003971218cc076719517097 430 Gene3D G3DSA:3.40.50.20 2 95 1.1E-37 T 14-10-2018 DDU33_00555 1443a3c34003971218cc076719517097 430 SMART SM01209 103 296 8.4E-140 T 14-10-2018 DDU33_00555 1443a3c34003971218cc076719517097 430 Gene3D G3DSA:3.30.470.20 191 329 5.0E-59 T 14-10-2018 DDU33_00555 1443a3c34003971218cc076719517097 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 4.9E-188 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_00555 1443a3c34003971218cc076719517097 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 4.4E-26 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_00555 1443a3c34003971218cc076719517097 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.268 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_00555 1443a3c34003971218cc076719517097 430 Gene3D G3DSA:3.30.1490.20 121 190 3.1E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DDU33_00555 1443a3c34003971218cc076719517097 430 SMART SM01210 330 423 7.0E-51 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_00555 1443a3c34003971218cc076719517097 430 Gene3D G3DSA:3.90.600.10 330 430 2.3E-31 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_00555 1443a3c34003971218cc076719517097 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.2E-35 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_00555 1443a3c34003971218cc076719517097 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 8.1E-85 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_00555 1443a3c34003971218cc076719517097 430 SUPERFAMILY SSF51246 329 423 1.1E-30 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDU33_00555 1443a3c34003971218cc076719517097 430 SUPERFAMILY SSF52440 1 103 5.18E-37 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DDU33_00555 1443a3c34003971218cc076719517097 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_02275 1c27fdb9a0d95960b39358d4d56fccd0 149 Pfam PF01797 Transposase IS200 like 4 118 2.5E-26 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DDU33_02275 1c27fdb9a0d95960b39358d4d56fccd0 149 Gene3D G3DSA:3.30.70.1290 1 126 1.2E-25 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DDU33_02275 1c27fdb9a0d95960b39358d4d56fccd0 149 SUPERFAMILY SSF143422 2 119 9.29E-29 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DDU33_02275 1c27fdb9a0d95960b39358d4d56fccd0 149 SMART SM01321 3 118 5.6E-24 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DDU33_08735 a7cba9a3af4544f297483c7b9a6642f3 467 Gene3D G3DSA:3.40.50.12780 8 359 4.9E-57 T 14-10-2018 DDU33_08735 a7cba9a3af4544f297483c7b9a6642f3 467 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 41 458 6.7E-130 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 DDU33_08735 a7cba9a3af4544f297483c7b9a6642f3 467 Gene3D G3DSA:3.30.300.30 361 464 5.9E-13 T 14-10-2018 DDU33_08735 a7cba9a3af4544f297483c7b9a6642f3 467 SUPERFAMILY SSF56801 10 462 1.83E-81 T 14-10-2018 DDU33_08735 a7cba9a3af4544f297483c7b9a6642f3 467 Pfam PF00501 AMP-binding enzyme 135 366 3.1E-37 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DDU33_08735 a7cba9a3af4544f297483c7b9a6642f3 467 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 14-10-2018 IPR020845 AMP-binding, conserved site DDU33_09215 2ed81e4f775048660ec69d97958ed7d4 95 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 94 26.29 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDU33_09215 2ed81e4f775048660ec69d97958ed7d4 95 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 84 4.0E-28 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DDU33_09215 2ed81e4f775048660ec69d97958ed7d4 95 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 72 7.0E-29 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDU33_09215 2ed81e4f775048660ec69d97958ed7d4 95 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 87 2.9E-31 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDU33_09215 2ed81e4f775048660ec69d97958ed7d4 95 PIRSF PIRSF002736 1 94 4.4E-38 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 7.1E-5 T 14-10-2018 DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 6 239 1.5E-98 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 238 1.5E-67 T 14-10-2018 DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 SUPERFAMILY SSF51735 2 240 1.87E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 Gene3D G3DSA:3.40.50.720 1 241 5.0E-85 T 14-10-2018 DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.7E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 5.7E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.7E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.7E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.7E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.7E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_04295 963ea0d97294b9f3090da9fc51ecc1ef 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDU33_09520 ecbe8925816e91bfdd327768a71f204e 640 SMART SM00491 481 610 1.3E-47 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DDU33_09520 ecbe8925816e91bfdd327768a71f204e 640 SUPERFAMILY SSF52540 47 603 3.48E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09520 ecbe8925816e91bfdd327768a71f204e 640 SUPERFAMILY SSF52540 20 238 2.57E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09520 ecbe8925816e91bfdd327768a71f204e 640 Gene3D G3DSA:3.40.50.300 445 639 6.0E-37 T 14-10-2018 DDU33_09520 ecbe8925816e91bfdd327768a71f204e 640 Gene3D G3DSA:3.40.50.300 24 289 7.6E-46 T 14-10-2018 DDU33_09520 ecbe8925816e91bfdd327768a71f204e 640 Pfam PF13307 Helicase C-terminal domain 465 623 2.8E-36 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DDU33_09520 ecbe8925816e91bfdd327768a71f204e 640 SMART SM00487 22 312 0.0054 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_08920 4017d023fcb3543df89da5889f333d91 536 PIRSF PIRSF006294 2 536 1.1E-230 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 Gene3D G3DSA:3.40.449.10 3 44 7.4E-8 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 Gene3D G3DSA:3.40.449.10 56 223 1.2E-233 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 Gene3D G3DSA:3.90.228.20 224 518 1.2E-233 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 SUPERFAMILY SSF68923 6 223 1.74E-89 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 261 276 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 13 536 55.104 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 Pfam PF01293 Phosphoenolpyruvate carboxykinase 19 486 1.1E-212 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 536 4.4E-287 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 SUPERFAMILY SSF53795 225 536 2.29E-129 T 14-10-2018 DDU33_08920 4017d023fcb3543df89da5889f333d91 536 Gene3D G3DSA:2.170.8.10 45 338 1.2E-233 T 14-10-2018 DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 PIRSF PIRSF002560 1 150 1.2E-28 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 SUPERFAMILY SSF47240 1 150 5.61E-30 T 14-10-2018 IPR009078 Ferritin-like superfamily DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 Pfam PF00210 Ferritin-like domain 20 139 4.4E-18 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 Gene3D G3DSA:1.20.1260.10 1 150 1.9E-35 T 14-10-2018 IPR012347 Ferritin-like DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 PRINTS PR00601 Bacterioferritin signature 22 42 7.7E-13 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 PRINTS PR00601 Bacterioferritin signature 43 63 7.7E-13 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 PRINTS PR00601 Bacterioferritin signature 103 123 7.7E-13 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDU33_03040 81bcbe26794d42cb8a75ac1aeece5d1b 150 PRINTS PR00601 Bacterioferritin signature 124 145 7.7E-13 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 Gene3D G3DSA:3.40.605.10 20 458 4.1E-173 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 Gene3D G3DSA:3.40.309.10 226 419 4.1E-173 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 SUPERFAMILY SSF56796 465 870 2.75E-116 T 14-10-2018 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 PIRSF PIRSF000111 1 871 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 Pfam PF00171 Aldehyde dehydrogenase family 11 276 1.8E-22 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 SUPERFAMILY SSF53720 16 467 3.14E-78 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 Gene3D G3DSA:1.20.1090.10 655 871 2.4E-67 T 14-10-2018 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 Gene3D G3DSA:3.40.50.1970 464 654 1.1E-62 T 14-10-2018 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 729 749 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 Pfam PF00465 Iron-containing alcohol dehydrogenase 471 860 9.9E-116 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDU33_06765 46d09732df0e0502e6af4379fbc92580 871 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 643 671 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDU33_04400 9bcc47970891343bb37a7c6b658393b1 100 Hamap MF_00634 UPF0235 protein YggU [yggU]. 10 100 20.198 T 14-10-2018 IPR003746 Protein of unknown function DUF167 DDU33_04400 9bcc47970891343bb37a7c6b658393b1 100 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 13 84 8.4E-27 T 14-10-2018 IPR003746 Protein of unknown function DUF167 DDU33_04400 9bcc47970891343bb37a7c6b658393b1 100 SUPERFAMILY SSF69786 6 98 1.12E-32 T 14-10-2018 IPR036591 YggU-like superfamily DDU33_04400 9bcc47970891343bb37a7c6b658393b1 100 Gene3D G3DSA:3.30.1200.10 2 100 5.2E-35 T 14-10-2018 IPR036591 YggU-like superfamily DDU33_04400 9bcc47970891343bb37a7c6b658393b1 100 SMART SM01152 10 86 2.5E-38 T 14-10-2018 IPR003746 Protein of unknown function DUF167 DDU33_04400 9bcc47970891343bb37a7c6b658393b1 100 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 94 2.1E-24 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 DDU33_10505 ef9a243fc58809714c157e5f571ba6ca 284 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 18 231 8.5E-36 T 14-10-2018 DDU33_10505 ef9a243fc58809714c157e5f571ba6ca 284 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 12 249 26.277 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 DDU33_02505 69545f18fe78a79b07ee2fda26241e45 145 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 9.5E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_02505 69545f18fe78a79b07ee2fda26241e45 145 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 1.3E-57 T 14-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 DDU33_02505 69545f18fe78a79b07ee2fda26241e45 145 SUPERFAMILY SSF52374 1 127 1.08E-31 T 14-10-2018 DDU33_02505 69545f18fe78a79b07ee2fda26241e45 145 Pfam PF01467 Cytidylyltransferase-like 5 124 1.5E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_02505 69545f18fe78a79b07ee2fda26241e45 145 Gene3D G3DSA:3.40.50.620 1 128 4.6E-40 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_06145 fdbb11c52207c6fec0c1d6b4aea65ca8 221 Gene3D G3DSA:3.40.50.2300 1 121 6.4E-38 T 14-10-2018 DDU33_06145 fdbb11c52207c6fec0c1d6b4aea65ca8 221 SMART SM00448 1 112 2.3E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_06145 fdbb11c52207c6fec0c1d6b4aea65ca8 221 Pfam PF00072 Response regulator receiver domain 3 111 2.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_06145 fdbb11c52207c6fec0c1d6b4aea65ca8 221 SMART SM00862 145 216 6.1E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_06145 fdbb11c52207c6fec0c1d6b4aea65ca8 221 Gene3D G3DSA:1.10.10.10 122 220 2.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06145 fdbb11c52207c6fec0c1d6b4aea65ca8 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_06145 fdbb11c52207c6fec0c1d6b4aea65ca8 221 SUPERFAMILY SSF52172 1 178 8.3E-37 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 Gene3D G3DSA:3.30.1340.10 2 86 2.9E-32 T 14-10-2018 IPR035895 HPr-like superfamily DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 SUPERFAMILY SSF55594 4 82 9.68E-26 T 14-10-2018 IPR035895 HPr-like superfamily DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 82 6.0E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 Pfam PF00381 PTS HPr component phosphorylation site 4 82 7.8E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 PRINTS PR00107 Phosphocarrier protein signature 39 54 9.3E-20 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 PRINTS PR00107 Phosphocarrier protein signature 54 71 9.3E-20 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_00845 4ea50aee02a57aa3dab333084bd984fc 86 PRINTS PR00107 Phosphocarrier protein signature 14 30 9.3E-20 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_01120 1bffbfd0ddfa748c22ac3ff3a4b1a7fd 275 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 274 5.4E-108 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DDU33_01120 1bffbfd0ddfa748c22ac3ff3a4b1a7fd 275 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 5 274 6.1E-125 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 SUPERFAMILY SSF56014 152 353 3.4E-50 T 14-10-2018 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 141 4.8E-10 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 362 427 5.9E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 SUPERFAMILY SSF55124 16 147 2.78E-24 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 21 568 7.9E-277 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Gene3D G3DSA:3.90.480.10 346 433 9.7E-27 T 14-10-2018 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Gene3D G3DSA:3.90.480.10 83 169 2.3E-18 T 14-10-2018 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Gene3D G3DSA:3.30.413.10 435 577 2.8E-31 T 14-10-2018 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 SUPERFAMILY SSF55124 355 431 2.13E-19 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Gene3D G3DSA:3.30.413.10 209 345 2.7E-40 T 14-10-2018 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 12 580 55.616 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 PRINTS PR00397 Sirohaem Fe-binding site signature 439 457 3.8E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 PRINTS PR00397 Sirohaem Fe-binding site signature 487 505 3.8E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 442 519 0.014 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 487 503 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 SUPERFAMILY SSF56014 440 568 3.27E-30 T 14-10-2018 DDU33_03725 8b284a3fe670ab214d7791a3a18a7a54 592 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 175 339 8.4E-40 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 Gene3D G3DSA:1.10.10.10 1 61 8.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 SMART SM00344 10 119 8.7E-49 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 SUPERFAMILY SSF46785 9 68 3.19E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 5.9E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 5.9E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 5.9E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 Gene3D G3DSA:3.30.70.920 62 156 7.3E-25 T 14-10-2018 DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 56 1.0E-19 T 14-10-2018 DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 Pfam PF01037 Lrp/AsnC ligand binding domain 76 150 7.8E-25 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDU33_08475 ebb2433e9e0a1923d6e53dabdcb7fb3a 160 SUPERFAMILY SSF54909 72 156 8.04E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 Gene3D G3DSA:2.40.30.10 10 104 3.3E-21 T 14-10-2018 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 257 332 3.1E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 Gene3D G3DSA:3.40.50.80 109 241 2.5E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00406 Cytochrome B5 reductase signature 117 136 4.6E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00406 Cytochrome B5 reductase signature 94 108 4.6E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00406 Cytochrome B5 reductase signature 207 215 4.6E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00406 Cytochrome B5 reductase signature 154 165 4.6E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00406 Cytochrome B5 reductase signature 57 64 4.6E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 SUPERFAMILY SSF63380 12 106 1.28E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 Gene3D G3DSA:3.10.20.30 242 339 1.2E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 SUPERFAMILY SSF54292 232 338 2.36E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 289 297 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 Pfam PF00175 Oxidoreductase NAD-binding domain 118 220 8.6E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 Pfam PF00970 Oxidoreductase FAD-binding domain 38 106 9.4E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 SUPERFAMILY SSF52343 97 237 2.75E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 57 64 1.2E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 165 1.2E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03975 d7100ac5efcb67bacc1247551e002c03 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 1.2E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_07605 7e2581cea657240985cf9e6c1ee28929 103 Pfam PF01253 Translation initiation factor SUI1 27 97 5.1E-17 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 DDU33_07605 7e2581cea657240985cf9e6c1ee28929 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.3E-38 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DDU33_07605 7e2581cea657240985cf9e6c1ee28929 103 PIRSF PIRSF037511 1 103 4.6E-34 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DDU33_07605 7e2581cea657240985cf9e6c1ee28929 103 Gene3D G3DSA:3.30.780.10 23 103 1.4E-32 T 14-10-2018 DDU33_07605 7e2581cea657240985cf9e6c1ee28929 103 SUPERFAMILY SSF55159 3 99 1.03E-24 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 SUPERFAMILY SSF55120 127 291 1.36E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 Gene3D G3DSA:3.30.70.1560 189 279 4.8E-53 T 14-10-2018 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 SMART SM00363 61 119 1.3E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 Gene3D G3DSA:3.10.290.10 57 117 5.1E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 Pfam PF00849 RNA pseudouridylate synthase 127 257 1.2E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 Pfam PF01479 S4 domain 62 102 7.7E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 131 290 1.4E-62 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 SUPERFAMILY SSF55174 54 169 1.7E-15 T 14-10-2018 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 Gene3D G3DSA:3.30.70.580 128 287 4.8E-53 T 14-10-2018 DDU33_00580 77b6242c5dbeaf0768a014ee7af4eaf3 340 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 165 179 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDU33_05190 5c3f8ee4bd3a8e6d40f564e0e300d3cd 178 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 6 157 5.8E-45 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDU33_05190 5c3f8ee4bd3a8e6d40f564e0e300d3cd 178 PIRSF PIRSF006118 1 168 7.9E-62 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDU33_05190 5c3f8ee4bd3a8e6d40f564e0e300d3cd 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 120 1.6E-15 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DDU33_05190 5c3f8ee4bd3a8e6d40f564e0e300d3cd 178 Gene3D G3DSA:3.40.50.1000 2 178 1.6E-54 T 14-10-2018 IPR023214 HAD superfamily DDU33_05190 5c3f8ee4bd3a8e6d40f564e0e300d3cd 178 SUPERFAMILY SSF56784 4 163 5.07E-42 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_05190 5c3f8ee4bd3a8e6d40f564e0e300d3cd 178 Pfam PF08282 haloacid dehalogenase-like hydrolase 80 140 2.5E-10 T 14-10-2018 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 14 472 32.639 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 14 316 1.7E-121 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 214 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 30 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 200 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 43 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 PRINTS PR00987 Glutamyl-tRNA synthetase signature 47 60 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 Gene3D G3DSA:1.10.10.350 379 478 1.4E-26 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 Gene3D G3DSA:3.40.50.620 13 325 5.7E-137 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 SUPERFAMILY SSF52374 14 309 5.36E-112 T 14-10-2018 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 21 32 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 SUPERFAMILY SSF48163 310 472 3.27E-47 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDU33_04760 dca3156590b5d0e8516cf9d101713817 479 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 14 476 6.4E-202 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DDU33_10665 cd8f3c81c31adf9d5a006135502b55d1 117 SUPERFAMILY SSF55620 1 116 1.67E-36 T 14-10-2018 DDU33_10665 cd8f3c81c31adf9d5a006135502b55d1 117 Gene3D G3DSA:3.30.1130.10 2 117 6.6E-39 T 14-10-2018 DDU33_10665 cd8f3c81c31adf9d5a006135502b55d1 117 TIGRFAM TIGR00526 folB_dom: FolB domain 3 115 1.6E-35 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDU33_10665 cd8f3c81c31adf9d5a006135502b55d1 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 115 5.0E-34 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDU33_10665 cd8f3c81c31adf9d5a006135502b55d1 117 SMART SM00905 5 115 1.9E-43 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDU33_10665 cd8f3c81c31adf9d5a006135502b55d1 117 Pfam PF02152 Dihydroneopterin aldolase 5 113 6.5E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DDU33_00915 e3f9fd8dc6562770c2ddfe3466ed5786 461 Gene3D G3DSA:1.20.1250.20 28 228 4.0E-33 T 14-10-2018 DDU33_00915 e3f9fd8dc6562770c2ddfe3466ed5786 461 PIRSF PIRSF002808 8 460 1.1E-109 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DDU33_00915 e3f9fd8dc6562770c2ddfe3466ed5786 461 SUPERFAMILY SSF103473 17 451 4.71E-60 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_00915 e3f9fd8dc6562770c2ddfe3466ed5786 461 Gene3D G3DSA:1.20.1250.20 246 460 5.7E-37 T 14-10-2018 DDU33_00915 e3f9fd8dc6562770c2ddfe3466ed5786 461 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 DDU33_00915 e3f9fd8dc6562770c2ddfe3466ed5786 461 Pfam PF07690 Major Facilitator Superfamily 35 397 2.1E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_00915 e3f9fd8dc6562770c2ddfe3466ed5786 461 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 4.6E-138 T 14-10-2018 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 Gene3D G3DSA:3.40.190.10 48 333 9.2E-110 T 14-10-2018 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PIRSF PIRSF019574 1 366 1.3E-111 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 Gene3D G3DSA:3.40.190.10 150 340 9.2E-110 T 14-10-2018 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 222 241 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 110 123 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 185 204 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 65 86 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 181 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 141 157 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 65 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 108 8.2E-105 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 SUPERFAMILY SSF53850 43 363 5.24E-87 T 14-10-2018 DDU33_10150 fa46286ea5c7a2ac8129ef929dad2596 366 Pfam PF13416 Bacterial extracellular solute-binding protein 59 332 7.7E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 SUPERFAMILY SSF52283 7 138 2.76E-51 T 14-10-2018 DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 SUPERFAMILY SSF51735 108 295 1.1E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 Gene3D G3DSA:3.40.50.720 109 297 2.7E-110 T 14-10-2018 DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.2E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 Gene3D G3DSA:3.30.70.260 328 408 4.4E-31 T 14-10-2018 DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 SUPERFAMILY SSF55021 336 408 5.83E-16 T 14-10-2018 DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 2.9E-39 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DDU33_04385 322fefcd961184cbe88c49495c76d49b 409 Gene3D G3DSA:3.40.50.720 14 312 2.7E-110 T 14-10-2018 DDU33_00300 4ec7f05e438ff17b2bb8706849264f26 119 Pfam PF04480 Protein of unknown function (DUF559) 1 95 2.0E-37 T 14-10-2018 IPR007569 Protein of unknown function DUF559 DDU33_00300 4ec7f05e438ff17b2bb8706849264f26 119 Gene3D G3DSA:3.40.960.10 1 98 4.8E-31 T 14-10-2018 DDU33_00300 4ec7f05e438ff17b2bb8706849264f26 119 SUPERFAMILY SSF52980 2 97 1.88E-16 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 Gene3D G3DSA:3.40.50.300 13 177 3.4E-101 T 14-10-2018 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 545 683 9.1E-44 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 Gene3D G3DSA:1.10.8.60 8 240 3.4E-101 T 14-10-2018 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 351 8.5E-135 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 356 1.4E-29 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.1E-44 T 14-10-2018 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 SUPERFAMILY SSF52540 34 222 3.13E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06885 44a33983bc2180d2c52a193228e45916 696 SUPERFAMILY SSF48019 243 359 1.04E-31 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 Gene3D G3DSA:1.20.272.10 242 358 3.3E-40 T 14-10-2018 DDU33_06885 44a33983bc2180d2c52a193228e45916 696 SMART SM00382 37 178 1.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_06885 44a33983bc2180d2c52a193228e45916 696 Gene3D G3DSA:3.30.300.150 543 668 4.3E-31 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 327 3.5E-44 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Gene3D G3DSA:1.10.8.60 330 403 3.5E-30 T 14-10-2018 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 SMART SM00382 190 330 7.7E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Gene3D G3DSA:3.40.50.300 142 329 8.4E-69 T 14-10-2018 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Pfam PF06480 FtsH Extracellular 8 79 8.8E-11 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 ProSitePatterns PS00674 AAA-protein family signature. 298 316 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Gene3D G3DSA:1.20.58.760 404 599 5.2E-67 T 14-10-2018 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 SUPERFAMILY SSF52540 148 398 7.46E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 593 9.6E-229 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Gene3D G3DSA:2.40.50.920 28 104 9.0E-15 T 14-10-2018 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 610 35.781 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 SUPERFAMILY SSF140990 410 602 7.46E-67 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DDU33_08770 3566ca97bbb5cd3d23a9dbfaf860caf1 642 Pfam PF01434 Peptidase family M41 388 591 2.1E-70 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 SUPERFAMILY SSF52540 4 165 4.56E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 Gene3D G3DSA:3.40.50.300 216 392 9.9E-49 T 14-10-2018 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 Gene3D G3DSA:3.40.50.300 1 160 3.5E-43 T 14-10-2018 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.2E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.2E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 398 476 3.8E-24 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 PIRSF PIRSF006485 1 485 4.9E-184 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 Hamap MF_00195 GTPase Der [der]. 2 480 38.408 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 SUPERFAMILY SSF52540 196 483 1.38E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 477 6.0E-175 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 Pfam PF01926 50S ribosome-binding GTPase 223 341 3.7E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.7E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 Gene3D G3DSA:3.30.300.20 397 479 7.0E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 4.2E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 387 1.3E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 SMART SM00382 1 141 0.98 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_09480 43ffa880a9be3acf0f2b40800830e06f 510 SMART SM00382 220 367 0.44 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_05125 99901f336bdd646537f07244c62fc43a 201 SUPERFAMILY SSF54593 5 198 4.89E-57 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDU33_05125 99901f336bdd646537f07244c62fc43a 201 Pfam PF06185 YecM protein 15 198 1.0E-59 T 14-10-2018 IPR010393 Protein of unknown function DUF991 DDU33_05125 99901f336bdd646537f07244c62fc43a 201 Gene3D G3DSA:3.10.180.10 3 200 4.5E-54 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 Gene3D G3DSA:3.30.70.260 310 380 1.2E-28 T 14-10-2018 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 Gene3D G3DSA:1.20.120.1320 42 134 8.1E-100 T 14-10-2018 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 Pfam PF00696 Amino acid kinase family 4 278 8.4E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 SUPERFAMILY SSF55021 378 449 3.13E-13 T 14-10-2018 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 449 1.2E-128 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 449 2.9E-125 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 SUPERFAMILY SSF55021 298 395 7.16E-19 T 14-10-2018 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 Gene3D G3DSA:3.30.70.260 381 450 9.4E-17 T 14-10-2018 DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 Gene3D G3DSA:3.40.1160.10 6 290 8.1E-100 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 SUPERFAMILY SSF53633 4 293 6.55E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_07610 aec306aa87a68e1e283d8fa95af76ce0 450 PIRSF PIRSF000726 2 450 1.8E-133 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 Gene3D G3DSA:3.40.50.300 1 203 2.7E-70 T 14-10-2018 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 SUPERFAMILY SSF50465 298 393 2.45E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.4E-238 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 SUPERFAMILY SSF50447 205 301 1.57E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 Gene3D G3DSA:2.40.30.10 206 334 2.1E-52 T 14-10-2018 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 Gene3D G3DSA:2.40.30.10 338 393 2.2E-30 T 14-10-2018 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.5E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 SUPERFAMILY SSF52540 6 219 2.17E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.3E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.7E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01860 05194347ce53e6b67c00a1dc8b1bcb19 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.302 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 Gene3D G3DSA:3.30.470.20 197 391 4.3E-63 T 14-10-2018 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 9.4E-182 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 SUPERFAMILY SSF51246 320 391 2.51E-16 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 392 50.884 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 SUPERFAMILY SSF56059 113 315 1.17E-60 T 14-10-2018 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 Gene3D G3DSA:3.30.1490.20 123 196 1.3E-33 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 82 1.9E-5 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 Pfam PF02222 ATP-grasp domain 123 295 7.5E-60 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 Gene3D G3DSA:3.40.50.20 2 122 2.1E-53 T 14-10-2018 DDU33_06330 1b5c592ac6c708b763a1659549b2ca9b 393 SUPERFAMILY SSF52440 3 112 6.47E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 92 114 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 156 175 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 207 226 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 133 153 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 180 201 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 271 298 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 333 344 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 300 311 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 PRINTS PR00688 Xylose isomerase signature 229 253 6.5E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 SUPERFAMILY SSF51658 3 438 7.63E-178 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 Gene3D G3DSA:3.20.20.150 2 439 3.2E-184 T 14-10-2018 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 4.9E-216 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01760 92b5d8685d61c30a458e75ece1ab4a2b 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.368 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.971 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 4.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 Gene3D G3DSA:1.20.5.1150 16 54 3.1E-19 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 Pfam PF01165 Ribosomal protein S21 4 56 2.4E-19 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01325 792c699fa6c702c0c7823e4388220323 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.3E-24 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00535 60877b9eba3eb9fd320da8a8d5cafa81 345 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 31 344 6.7E-145 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DDU33_00535 60877b9eba3eb9fd320da8a8d5cafa81 345 SUPERFAMILY SSF56752 4 341 3.66E-98 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DDU33_00535 60877b9eba3eb9fd320da8a8d5cafa81 345 Gene3D G3DSA:3.30.470.10 1 165 4.0E-58 T 14-10-2018 DDU33_00535 60877b9eba3eb9fd320da8a8d5cafa81 345 ProSitePatterns PS00770 Aminotransferases class-IV signature. 225 254 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DDU33_00535 60877b9eba3eb9fd320da8a8d5cafa81 345 Gene3D G3DSA:3.20.10.10 166 345 9.3E-54 T 14-10-2018 DDU33_00535 60877b9eba3eb9fd320da8a8d5cafa81 345 Pfam PF01063 Amino-transferase class IV 56 298 6.8E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DDU33_00535 60877b9eba3eb9fd320da8a8d5cafa81 345 PIRSF PIRSF006468 1 345 7.0E-120 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DDU33_01580 550f3e4e30d12d4175469dd2e88129d2 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 71.603 T 14-10-2018 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 DDU33_01580 550f3e4e30d12d4175469dd2e88129d2 332 Gene3D G3DSA:3.30.60.50 165 220 7.7E-113 T 14-10-2018 DDU33_01580 550f3e4e30d12d4175469dd2e88129d2 332 Gene3D G3DSA:1.10.1530.10 5 64 7.7E-113 T 14-10-2018 DDU33_01580 550f3e4e30d12d4175469dd2e88129d2 332 Gene3D G3DSA:3.30.1370.60 65 270 7.7E-113 T 14-10-2018 DDU33_01580 550f3e4e30d12d4175469dd2e88129d2 332 SUPERFAMILY SSF89733 2 332 3.4E-94 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 DDU33_01580 550f3e4e30d12d4175469dd2e88129d2 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 330 9.4E-102 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 DDU33_02585 651cbaa5333fa7b13a270963d44c5e80 327 SUPERFAMILY SSF55681 16 322 2.79E-80 T 14-10-2018 DDU33_02585 651cbaa5333fa7b13a270963d44c5e80 327 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 21 322 1.8E-130 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 DDU33_02585 651cbaa5333fa7b13a270963d44c5e80 327 Pfam PF00152 tRNA synthetases class II (D, K and N) 18 323 7.8E-46 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_02585 651cbaa5333fa7b13a270963d44c5e80 327 Gene3D G3DSA:3.30.930.10 6 327 7.7E-111 T 14-10-2018 DDU33_02585 651cbaa5333fa7b13a270963d44c5e80 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 35 45 1.3E-6 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_02585 651cbaa5333fa7b13a270963d44c5e80 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 103 120 1.3E-6 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_02585 651cbaa5333fa7b13a270963d44c5e80 327 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 6 327 52.95 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 DDU33_06675 9d80c9c5fd1cf69954e972da3b42af0c 285 Pfam PF03668 P-loop ATPase protein family 1 280 4.2E-126 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DDU33_06675 9d80c9c5fd1cf69954e972da3b42af0c 285 SUPERFAMILY SSF52540 1 151 2.18E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06675 9d80c9c5fd1cf69954e972da3b42af0c 285 PIRSF PIRSF005052 1 283 1.5E-108 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DDU33_06675 9d80c9c5fd1cf69954e972da3b42af0c 285 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 280 40.234 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DDU33_06675 9d80c9c5fd1cf69954e972da3b42af0c 285 Gene3D G3DSA:3.40.50.300 26 158 2.4E-9 T 14-10-2018 DDU33_04180 c5304841d9efc9800f9567957d8758a9 670 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 93 664 1.2E-192 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 DDU33_04180 c5304841d9efc9800f9567957d8758a9 670 SUPERFAMILY SSF51445 133 660 7.03E-143 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_04180 c5304841d9efc9800f9567957d8758a9 670 Pfam PF02446 4-alpha-glucanotransferase 139 645 1.2E-128 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 DDU33_04180 c5304841d9efc9800f9567957d8758a9 670 Gene3D G3DSA:3.20.20.80 130 665 3.5E-120 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 673 5.4E-274 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 14 328 7.0E-137 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SMART SM00278 554 573 3.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SMART SM00278 522 541 110.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SMART SM00278 490 509 8.4 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SMART SM00278 456 475 1.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SUPERFAMILY SSF47781 414 594 1.71E-65 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:1.10.150.20 442 515 1.3E-30 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:3.30.470.30 128 262 7.9E-98 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 PIRSF PIRSF001604 5 679 6.2E-255 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SUPERFAMILY SSF52113 603 677 2.94E-19 T 14-10-2018 IPR036420 BRCT domain superfamily DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 332 408 2.2E-35 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:1.10.287.610 12 76 3.4E-28 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SUPERFAMILY SSF50249 328 410 1.39E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Hamap MF_01588 DNA ligase [ligA]. 13 677 54.137 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 604 675 5.8E-15 T 14-10-2018 IPR001357 BRCT domain DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:3.30.1490.70 89 328 7.9E-98 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 418 444 2.9E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SMART SM00532 11 458 8.5E-281 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Pfam PF12826 Helix-hairpin-helix motif 520 583 1.4E-23 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:2.20.70.80 401 441 4.4E-20 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SUPERFAMILY SSF56091 12 326 6.62E-120 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 124 153 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 SMART SM00292 603 678 7.0E-12 T 14-10-2018 IPR001357 BRCT domain DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Pfam PF14520 Helix-hairpin-helix domain 456 505 3.1E-5 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 341 356 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:2.40.50.140 329 400 4.0E-34 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:1.10.150.20 516 594 6.6E-30 T 14-10-2018 DDU33_10515 dc32b951df45e93f9e6e56bda515c16c 679 Gene3D G3DSA:3.40.50.10190 595 678 2.6E-27 T 14-10-2018 IPR036420 BRCT domain superfamily DDU33_03825 5fdd787e7ba517b4f9f030e868e21d2c 82 Gene3D G3DSA:1.10.150.250 1 82 3.3E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DDU33_03825 5fdd787e7ba517b4f9f030e868e21d2c 82 Pfam PF03937 Flavinator of succinate dehydrogenase 7 75 6.0E-22 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase DDU33_03825 5fdd787e7ba517b4f9f030e868e21d2c 82 SUPERFAMILY SSF109910 3 78 3.79E-24 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DDU33_00490 924dc3ba8a0b40a05dadac99bb728d11 357 Gene3D G3DSA:3.20.20.70 8 355 1.0E-153 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_00490 924dc3ba8a0b40a05dadac99bb728d11 357 PIRSF PIRSF001361 1 357 3.6E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDU33_00490 924dc3ba8a0b40a05dadac99bb728d11 357 Pfam PF00793 DAHP synthetase I family 47 345 1.6E-100 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDU33_00490 924dc3ba8a0b40a05dadac99bb728d11 357 SUPERFAMILY SSF51569 13 353 6.78E-134 T 14-10-2018 DDU33_00490 924dc3ba8a0b40a05dadac99bb728d11 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 14 353 3.5E-157 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDU33_07450 a530cc86ae658ab4911595b2a4631672 142 SUPERFAMILY SSF52161 1 140 1.05E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_07450 a530cc86ae658ab4911595b2a4631672 142 PIRSF PIRSF002181 1 142 4.0E-52 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDU33_07450 a530cc86ae658ab4911595b2a4631672 142 Pfam PF00572 Ribosomal protein L13 15 138 1.7E-57 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDU33_07450 a530cc86ae658ab4911595b2a4631672 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.676 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DDU33_07450 a530cc86ae658ab4911595b2a4631672 142 Gene3D G3DSA:3.90.1180.10 1 142 6.7E-66 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_07450 a530cc86ae658ab4911595b2a4631672 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.8E-69 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_07450 a530cc86ae658ab4911595b2a4631672 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 DDU33_03075 25c60d86d39216fea069aa0b622dcbdd 137 Pfam PF03960 ArsC family 7 115 6.2E-18 T 14-10-2018 IPR006660 Arsenate reductase-like DDU33_03075 25c60d86d39216fea069aa0b622dcbdd 137 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 114 6.1E-38 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 DDU33_03075 25c60d86d39216fea069aa0b622dcbdd 137 SUPERFAMILY SSF52833 3 132 2.8E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_03075 25c60d86d39216fea069aa0b622dcbdd 137 Gene3D G3DSA:3.40.30.10 1 137 6.9E-49 T 14-10-2018 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 Pfam PF04324 BFD-like [2Fe-2S] binding domain 442 491 1.7E-9 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DDU33_03335 3ed7579c9549e75eda871e7513698202 560 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 20 549 4.5E-261 T 14-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 SUPERFAMILY SSF51905 19 385 2.06E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_03335 3ed7579c9549e75eda871e7513698202 560 Gene3D G3DSA:3.50.50.60 20 376 3.8E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_03335 3ed7579c9549e75eda871e7513698202 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 7.4E-22 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 31 7.4E-22 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 32 42 7.4E-22 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 7.4E-22 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 48 60 7.4E-22 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 SUPERFAMILY SSF54373 236 327 1.44E-12 T 14-10-2018 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 Pfam PF01266 FAD dependent oxidoreductase 20 369 7.1E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 24 41 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 Gene3D G3DSA:3.30.9.10 96 328 3.8E-75 T 14-10-2018 DDU33_03335 3ed7579c9549e75eda871e7513698202 560 Gene3D G3DSA:1.10.10.1100 430 501 5.1E-17 T 14-10-2018 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 117 4.1E-37 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 Pfam PF03830 PTS system sorbose subfamily IIB component 165 311 5.8E-54 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 SUPERFAMILY SSF53062 2 134 3.01E-35 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 165 311 4.3E-54 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 Gene3D G3DSA:3.40.35.10 161 323 8.3E-58 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 Pfam PF03610 PTS system fructose IIA component 5 117 3.7E-29 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 Gene3D G3DSA:3.40.50.510 2 136 2.3E-37 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DDU33_04530 5e77e97f2ad7703ac47d5da8d3617bb3 325 SUPERFAMILY SSF52728 165 323 2.62E-54 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DDU33_01745 0f7e5b025989f0d14005dd53875762c7 263 Pfam PF00535 Glycosyl transferase family 2 3 113 1.8E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_01745 0f7e5b025989f0d14005dd53875762c7 263 Gene3D G3DSA:3.90.550.10 1 205 2.5E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01745 0f7e5b025989f0d14005dd53875762c7 263 SUPERFAMILY SSF53448 1 203 1.5E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_04940 53eceea6c1793157bb1810d099ca71ee 125 Pfam PF04170 NlpE N-terminal domain 28 112 5.2E-22 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE DDU33_04940 53eceea6c1793157bb1810d099ca71ee 125 Gene3D G3DSA:2.40.128.640 20 124 2.0E-24 T 14-10-2018 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 SMART SM00382 73 244 6.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 21 340 1.3E-168 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 Pfam PF00154 recA bacterial DNA recombination protein 23 283 5.7E-146 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 Gene3D G3DSA:3.40.50.300 42 283 4.3E-84 T 14-10-2018 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 Gene3D G3DSA:3.30.250.10 284 361 9.8E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 SUPERFAMILY SSF54752 285 341 2.62E-17 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 ProSitePatterns PS00321 recA signature. 229 237 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 SUPERFAMILY SSF52540 21 283 2.61E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 Hamap MF_00268 Protein RecA [recA]. 21 345 50.652 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 PRINTS PR00142 RecA protein signature 259 288 1.2E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 PRINTS PR00142 RecA protein signature 181 210 1.2E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 PRINTS PR00142 RecA protein signature 226 254 1.2E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 PRINTS PR00142 RecA protein signature 109 138 1.2E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 PRINTS PR00142 RecA protein signature 143 172 1.2E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_00165 a2c0e2ba19ae6c3553eced07f7851a90 373 PRINTS PR00142 RecA protein signature 313 330 1.2E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DDU33_10490 f6e6692caaf7d3a47bc82406ab9dab24 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 5.1E-137 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDU33_10490 f6e6692caaf7d3a47bc82406ab9dab24 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDU33_10490 f6e6692caaf7d3a47bc82406ab9dab24 354 SUPERFAMILY SSF51726 1 353 5.23E-122 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_10490 f6e6692caaf7d3a47bc82406ab9dab24 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.671 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDU33_10490 f6e6692caaf7d3a47bc82406ab9dab24 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 9.7E-141 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDU33_10490 f6e6692caaf7d3a47bc82406ab9dab24 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DDU33_10490 f6e6692caaf7d3a47bc82406ab9dab24 354 Gene3D G3DSA:3.20.20.210 1 354 7.6E-159 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:2.40.50.100 1024 1127 3.2E-29 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 764 3.2E-18 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:2.40.50.100 1152 1215 3.2E-61 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:1.10.274.100 491 641 1.4E-38 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:2.40.50.100 949 1023 1.9E-27 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 645 1.0E-26 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1374 18.966 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 SUPERFAMILY SSF64484 18 1364 0.0 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:1.10.40.90 375 417 4.3E-21 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 343 5.7E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:1.10.150.390 1316 1376 1.2E-28 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:1.10.132.30 642 791 3.1E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 SMART SM00663 236 515 2.7E-180 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 21 1367 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 486 7.4E-26 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 394 8.0E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Gene3D G3DSA:1.10.1790.20 1136 1314 3.2E-61 T 14-10-2018 DDU33_03500 5ce905c074c0f1738c5fc1b0567722fe 1427 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1315 6.2E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_00945 454f9f63d3d885292d8818501851c36c 249 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 4 248 37.499 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DDU33_00945 454f9f63d3d885292d8818501851c36c 249 Gene3D G3DSA:3.40.1630.10 2 56 1.5E-13 T 14-10-2018 DDU33_00945 454f9f63d3d885292d8818501851c36c 249 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 2.6E-106 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DDU33_00945 454f9f63d3d885292d8818501851c36c 249 Gene3D G3DSA:3.40.50.150 57 249 1.3E-69 T 14-10-2018 DDU33_00945 454f9f63d3d885292d8818501851c36c 249 SUPERFAMILY SSF53335 3 246 4.23E-72 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_10425 fbd22e2d189310252454175c9813010a 128 Pfam PF01381 Helix-turn-helix 7 61 4.1E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_10425 fbd22e2d189310252454175c9813010a 128 SMART SM00530 6 61 8.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_10425 fbd22e2d189310252454175c9813010a 128 ProDom PD740661 HI1458 EAG0009 55 124 2.0E-12 T 14-10-2018 DDU33_10425 fbd22e2d189310252454175c9813010a 128 Gene3D G3DSA:1.10.260.40 2 116 1.6E-15 T 14-10-2018 DDU33_10425 fbd22e2d189310252454175c9813010a 128 SUPERFAMILY SSF47413 3 64 3.94E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 6.2E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 6.2E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 6.2E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 6.2E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 282 370 1.2E-24 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 SUPERFAMILY SSF51419 26 283 7.41E-82 T 14-10-2018 IPR029066 PLP-binding barrel DDU33_02215 49e389f08e0952d750d30816a3baab25 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 412 3.2E-163 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DDU33_02215 49e389f08e0952d750d30816a3baab25 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 413 40.971 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 2.0E-79 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DDU33_02215 49e389f08e0952d750d30816a3baab25 416 Gene3D G3DSA:3.20.20.10 34 276 6.5E-147 T 14-10-2018 IPR029066 PLP-binding barrel DDU33_02215 49e389f08e0952d750d30816a3baab25 416 Gene3D G3DSA:2.40.37.10 14 409 6.5E-147 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 8.9E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 8.9E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 8.9E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 8.9E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 8.9E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DDU33_02215 49e389f08e0952d750d30816a3baab25 416 SUPERFAMILY SSF50621 258 413 1.03E-48 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DDU33_09420 800f897bb5d5192bdbc78c9828ae44ec 127 Pfam PF01592 NifU-like N terminal domain 2 126 5.4E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DDU33_09420 800f897bb5d5192bdbc78c9828ae44ec 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.0E-67 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DDU33_09420 800f897bb5d5192bdbc78c9828ae44ec 127 Gene3D G3DSA:3.90.1010.10 1 127 8.7E-58 T 14-10-2018 DDU33_09420 800f897bb5d5192bdbc78c9828ae44ec 127 SUPERFAMILY SSF82649 1 125 3.92E-47 T 14-10-2018 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 9.1E-77 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 Pfam PF00925 GTP cyclohydrolase II 211 372 2.9E-70 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 SUPERFAMILY SSF55821 3 203 1.12E-82 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 204 399 42.537 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 SUPERFAMILY SSF142695 205 376 1.57E-68 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 211 396 9.4E-83 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 PIRSF PIRSF001259 2 399 1.6E-173 T 14-10-2018 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 5.1E-84 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 203 38.108 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 3 395 51.721 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 Gene3D G3DSA:3.90.870.10 1 205 2.7E-86 T 14-10-2018 DDU33_07030 72a080caebdf4097fdf4619db0f4da67 399 Gene3D G3DSA:3.40.50.10990 206 377 9.9E-75 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DDU33_08190 55cb6c4656f473361d4e4a4046731212 124 Pfam PF04247 Invasion gene expression up-regulator, SirB 8 124 1.8E-24 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB DDU33_08190 55cb6c4656f473361d4e4a4046731212 124 PIRSF PIRSF005610 1 124 6.8E-36 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB DDU33_02880 b2c6e91e9436fa06cd660a42677a90d3 140 Gene3D G3DSA:3.40.50.1010 1 139 1.2E-34 T 14-10-2018 DDU33_02880 b2c6e91e9436fa06cd660a42677a90d3 140 SUPERFAMILY SSF88723 1 137 1.29E-22 T 14-10-2018 IPR029060 PIN-like domain superfamily DDU33_02880 b2c6e91e9436fa06cd660a42677a90d3 140 Pfam PF01850 PIN domain 2 130 1.7E-11 T 14-10-2018 IPR002716 PIN domain DDU33_01050 cd9af27ee49b57a1eb6f4f90d4212450 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 258 37.561 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DDU33_01050 cd9af27ee49b57a1eb6f4f90d4212450 258 SUPERFAMILY SSF64167 1 256 6.02E-81 T 14-10-2018 DDU33_01050 cd9af27ee49b57a1eb6f4f90d4212450 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 246 5.2E-70 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DDU33_01050 cd9af27ee49b57a1eb6f4f90d4212450 258 Pfam PF01975 Survival protein SurE 3 195 3.1E-59 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DDU33_01050 cd9af27ee49b57a1eb6f4f90d4212450 258 Gene3D G3DSA:3.40.1210.10 1 258 4.7E-88 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DDU33_08345 78646eba6173d9771168533942b90aa1 712 PIRSF PIRSF006107 1 712 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDU33_08345 78646eba6173d9771168533942b90aa1 712 SUPERFAMILY SSF75138 229 352 4.51E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DDU33_08345 78646eba6173d9771168533942b90aa1 712 SUPERFAMILY SSF52540 1 239 1.54E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08345 78646eba6173d9771168533942b90aa1 712 Gene3D G3DSA:3.40.50.300 5 215 8.8E-18 T 14-10-2018 DDU33_08345 78646eba6173d9771168533942b90aa1 712 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 2.5E-128 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDU33_08345 78646eba6173d9771168533942b90aa1 712 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 8.6E-140 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDU33_08345 78646eba6173d9771168533942b90aa1 712 Pfam PF07085 DRTGG domain 233 344 1.3E-27 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DDU33_08345 78646eba6173d9771168533942b90aa1 712 SUPERFAMILY SSF53659 392 709 3.08E-94 T 14-10-2018 DDU33_08345 78646eba6173d9771168533942b90aa1 712 Gene3D G3DSA:3.40.1390.20 224 366 6.0E-14 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DDU33_08345 78646eba6173d9771168533942b90aa1 712 Gene3D G3DSA:3.40.50.10950 399 709 2.5E-135 T 14-10-2018 DDU33_08345 78646eba6173d9771168533942b90aa1 712 Gene3D G3DSA:3.40.50.10750 529 682 2.5E-135 T 14-10-2018 DDU33_08345 78646eba6173d9771168533942b90aa1 712 Pfam PF13500 AAA domain 3 229 2.5E-51 T 14-10-2018 DDU33_07920 5bbdebe79b01fb642f14ed3ce9b76072 110 Pfam PF10761 Protein of unknown function (DUF2590) 7 105 5.4E-44 T 14-10-2018 IPR019697 Bacteriophage HP1, Orf28 DDU33_06580 9eed38030bc8c208b35da381fb4e63a4 339 SMART SM00849 100 308 1.6E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_06580 9eed38030bc8c208b35da381fb4e63a4 339 Gene3D G3DSA:3.60.15.10 33 338 3.4E-91 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_06580 9eed38030bc8c208b35da381fb4e63a4 339 Pfam PF00753 Metallo-beta-lactamase superfamily 104 308 7.8E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_06580 9eed38030bc8c208b35da381fb4e63a4 339 SUPERFAMILY SSF56281 33 330 1.18E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_08635 86dbdd2ef09d4c210247d05fb5d6e869 714 SUPERFAMILY SSF48435 54 546 2.09E-75 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 DDU33_08635 86dbdd2ef09d4c210247d05fb5d6e869 714 Pfam PF01464 Transglycosylase SLT domain 560 663 9.2E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DDU33_08635 86dbdd2ef09d4c210247d05fb5d6e869 714 Gene3D G3DSA:1.10.1240.20 474 541 2.5E-16 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 DDU33_08635 86dbdd2ef09d4c210247d05fb5d6e869 714 Pfam PF14718 Soluble lytic murein transglycosylase L domain 480 541 1.6E-20 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 DDU33_08635 86dbdd2ef09d4c210247d05fb5d6e869 714 Gene3D G3DSA:1.10.530.10 543 714 1.9E-42 T 14-10-2018 DDU33_08635 86dbdd2ef09d4c210247d05fb5d6e869 714 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 570 598 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DDU33_08635 86dbdd2ef09d4c210247d05fb5d6e869 714 SUPERFAMILY SSF53955 549 703 4.57E-40 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 2 349 8.8E-161 T 14-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 Gene3D G3DSA:3.40.50.1170 24 235 2.9E-84 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 PIRSF PIRSF500176 23 349 3.3E-84 T 14-10-2018 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 105 115 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 Pfam PF00710 Asparaginase, N-terminal 27 216 4.5E-62 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 PIRSF PIRSF001220 21 348 3.7E-94 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 SUPERFAMILY SSF53774 24 348 2.09E-106 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 PRINTS PR00139 Asparaginase/glutaminase family signature 27 38 3.4E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 PRINTS PR00139 Asparaginase/glutaminase family signature 104 122 3.4E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 PRINTS PR00139 Asparaginase/glutaminase family signature 283 301 3.4E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 29 37 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 Gene3D G3DSA:3.40.50.40 236 349 7.1E-43 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DDU33_03280 a28ef6d5c6fd38c8f7286c713e655097 349 SMART SM00870 26 343 8.4E-142 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 SUPERFAMILY SSF53807 19 290 6.38E-92 T 14-10-2018 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00690 Adhesin family signature 256 275 8.9E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00690 Adhesin family signature 230 248 8.9E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00690 Adhesin family signature 66 83 8.9E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00690 Adhesin family signature 53 66 8.9E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00690 Adhesin family signature 22 40 8.9E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00690 Adhesin family signature 177 198 8.9E-44 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00691 Adhesin B signature 248 266 6.0E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00691 Adhesin B signature 22 43 6.0E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00691 Adhesin B signature 47 65 6.0E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00691 Adhesin B signature 203 221 6.0E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00691 Adhesin B signature 177 194 6.0E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00691 Adhesin B signature 66 85 6.0E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 PRINTS PR00691 Adhesin B signature 226 243 6.0E-37 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 25 287 2.9E-79 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 Gene3D G3DSA:3.40.50.1980 179 290 5.2E-42 T 14-10-2018 DDU33_08240 971f2e48556e9a63be7dea4f1c052174 292 Gene3D G3DSA:3.40.50.1980 22 178 3.8E-56 T 14-10-2018 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 PIRSF PIRSF000193 2 270 5.4E-77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 SUPERFAMILY SSF51735 3 159 1.27E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 267 3.5E-75 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 245 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 Gene3D G3DSA:3.40.50.720 1 163 8.6E-53 T 14-10-2018 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 98 1.0E-22 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 SUPERFAMILY SSF48179 161 269 8.33E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 Gene3D G3DSA:1.10.3730.10 164 271 2.6E-35 T 14-10-2018 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 267 2.9E-31 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DDU33_04965 80f4dc56ab908e3d81a22faa070dbd4d 271 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 267 25.82 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DDU33_00505 fe18c4d408bbe26bea741c90ac99aa79 120 Pfam PF01230 HIT domain 16 112 6.0E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DDU33_00505 fe18c4d408bbe26bea741c90ac99aa79 120 PRINTS PR00332 Histidine triad family signature 31 49 3.7E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DDU33_00505 fe18c4d408bbe26bea741c90ac99aa79 120 PRINTS PR00332 Histidine triad family signature 10 26 3.7E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DDU33_00505 fe18c4d408bbe26bea741c90ac99aa79 120 PRINTS PR00332 Histidine triad family signature 99 109 3.7E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DDU33_00505 fe18c4d408bbe26bea741c90ac99aa79 120 Gene3D G3DSA:3.30.428.10 1 115 3.1E-35 T 14-10-2018 IPR036265 HIT-like superfamily DDU33_00505 fe18c4d408bbe26bea741c90ac99aa79 120 ProSitePatterns PS00892 HIT domain signature. 92 110 - T 14-10-2018 IPR019808 Histidine triad, conserved site DDU33_00505 fe18c4d408bbe26bea741c90ac99aa79 120 SUPERFAMILY SSF54197 7 115 8.51E-34 T 14-10-2018 IPR036265 HIT-like superfamily DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 348 1.2E-186 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 SUPERFAMILY SSF54197 4 178 8.9E-73 T 14-10-2018 IPR036265 HIT-like superfamily DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 152 169 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 PIRSF PIRSF000808 1 343 1.3E-120 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 Gene3D G3DSA:3.30.428.10 177 349 9.9E-67 T 14-10-2018 IPR036265 HIT-like superfamily DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 Gene3D G3DSA:3.30.428.10 46 176 7.1E-57 T 14-10-2018 IPR036265 HIT-like superfamily DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 177 6.1E-70 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 347 2.6E-65 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DDU33_10080 ddcdbab5e79271a446a95840ea6f6fef 349 SUPERFAMILY SSF54197 181 347 2.65E-52 T 14-10-2018 IPR036265 HIT-like superfamily DDU33_06415 03111a074bcc3cd973c462ba5b4702ed 347 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 335 45.822 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DDU33_06415 03111a074bcc3cd973c462ba5b4702ed 347 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 291 2.3E-86 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DDU33_06415 03111a074bcc3cd973c462ba5b4702ed 347 SUPERFAMILY SSF51445 1 288 6.53E-78 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_06415 03111a074bcc3cd973c462ba5b4702ed 347 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DDU33_06415 03111a074bcc3cd973c462ba5b4702ed 347 Gene3D G3DSA:3.20.20.300 1 347 5.8E-114 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DDU33_08685 bd773c905707da948d59fa3e9277f9c0 277 Gene3D G3DSA:3.30.1380.10 21 275 3.9E-95 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDU33_08685 bd773c905707da948d59fa3e9277f9c0 277 PIRSF PIRSF018455 2 277 3.4E-118 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 DDU33_08685 bd773c905707da948d59fa3e9277f9c0 277 Pfam PF03411 Penicillin-insensitive murein endopeptidase 37 270 2.1E-96 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 DDU33_08685 bd773c905707da948d59fa3e9277f9c0 277 SUPERFAMILY SSF55166 22 273 1.96E-103 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 SUPERFAMILY SSF50447 156 304 9.15E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 SUPERFAMILY SSF52540 4 212 8.52E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 139 1.0E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Gene3D G3DSA:3.40.50.300 6 203 3.1E-67 T 14-10-2018 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 PRINTS PR00315 GTP-binding elongation factor signature 11 24 9.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 PRINTS PR00315 GTP-binding elongation factor signature 128 137 9.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 PRINTS PR00315 GTP-binding elongation factor signature 56 64 9.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 PRINTS PR00315 GTP-binding elongation factor signature 92 103 9.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 PRINTS PR00315 GTP-binding elongation factor signature 76 86 9.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Pfam PF03144 Elongation factor Tu domain 2 224 294 1.6E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 604 1.7E-286 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Gene3D G3DSA:2.40.30.10 204 304 1.4E-33 T 14-10-2018 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 SUPERFAMILY SSF54980 307 392 1.08E-14 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Gene3D G3DSA:3.30.70.240 394 487 4.3E-127 T 14-10-2018 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Pfam PF00679 Elongation factor G C-terminus 402 481 5.0E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Gene3D G3DSA:3.30.70.870 311 595 4.3E-127 T 14-10-2018 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Gene3D G3DSA:2.40.50.250 488 604 4.3E-127 T 14-10-2018 DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 SUPERFAMILY SSF54980 403 517 3.45E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DDU33_00415 460731eee1914de82aaaaa7aedbdba48 615 Pfam PF00009 Elongation factor Tu GTP binding domain 8 200 1.9E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Gene3D G3DSA:3.30.565.10 3 216 1.2E-74 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 SUPERFAMILY SSF55874 5 216 2.88E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 SMART SM00433 35 630 1.6E-220 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 SUPERFAMILY SSF56719 389 628 1.33E-79 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Pfam PF01751 Toprim domain 414 523 8.1E-13 T 14-10-2018 IPR006171 TOPRIM domain DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 SUPERFAMILY SSF54211 218 383 1.54E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 SMART SM00387 28 174 7.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Gene3D G3DSA:3.30.230.10 217 390 5.0E-56 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Pfam PF00204 DNA gyrase B 219 385 4.1E-40 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 626 2.2E-23 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 110 124 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 267 280 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 67 80 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 562 578 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 32 47 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 480 496 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 518 530 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 415 429 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR00418 DNA topoisomerase II family signature 498 515 6.8E-60 T 14-10-2018 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 634 46.373 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 170 1.8E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 539 561 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 1.3E-126 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 Gene3D G3DSA:3.40.50.670 391 629 1.5E-92 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_00205 2c87af2916bf490eb230572ff00b5409 636 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 630 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_02920 b7033bfb8eed9ddf1598af59be21ddc6 388 SUPERFAMILY SSF116734 3 193 4.91E-51 T 14-10-2018 DDU33_02920 b7033bfb8eed9ddf1598af59be21ddc6 388 Pfam PF01420 Type I restriction modification DNA specificity domain 6 178 2.6E-31 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DDU33_02920 b7033bfb8eed9ddf1598af59be21ddc6 388 Pfam PF01420 Type I restriction modification DNA specificity domain 198 373 6.7E-15 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DDU33_02920 b7033bfb8eed9ddf1598af59be21ddc6 388 Gene3D G3DSA:3.90.220.20 6 150 8.0E-88 T 14-10-2018 DDU33_02920 b7033bfb8eed9ddf1598af59be21ddc6 388 Gene3D G3DSA:3.90.220.20 198 346 8.0E-88 T 14-10-2018 DDU33_02920 b7033bfb8eed9ddf1598af59be21ddc6 388 Gene3D G3DSA:1.10.287.1120 151 387 8.0E-88 T 14-10-2018 DDU33_02920 b7033bfb8eed9ddf1598af59be21ddc6 388 SUPERFAMILY SSF116734 199 387 9.81E-32 T 14-10-2018 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 10 867 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Gene3D G3DSA:1.10.390.10 280 443 2.8E-66 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Pfam PF01433 Peptidase family M1 domain 208 439 4.4E-63 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Gene3D G3DSA:1.25.50.10 547 868 4.1E-112 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Gene3D G3DSA:2.60.40.1730 13 194 9.2E-68 T 14-10-2018 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Gene3D G3DSA:2.60.40.1840 444 546 1.9E-30 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 2.7E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 2.7E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 2.7E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 2.7E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 2.7E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 550 868 2.5E-113 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Gene3D G3DSA:1.10.1740.60 195 279 4.0E-40 T 14-10-2018 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 SUPERFAMILY SSF55486 204 450 1.54E-77 T 14-10-2018 DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 546 8.3E-31 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DDU33_05980 81f73ead04e37104ada1632d779c3dd1 868 SUPERFAMILY SSF63737 2 193 2.22E-43 T 14-10-2018 DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 Gene3D G3DSA:3.30.70.250 126 200 3.6E-103 T 14-10-2018 DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 Gene3D G3DSA:3.40.366.10 6 288 3.6E-103 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 Pfam PF00698 Acyl transferase domain 7 297 5.7E-36 T 14-10-2018 IPR014043 Acyl transferase DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 SUPERFAMILY SSF52151 4 308 1.86E-82 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 SUPERFAMILY SSF55048 131 196 1.96E-15 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 294 3.7E-125 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 304 7.1E-37 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain DDU33_04290 bac1fd4575f7ae7de8e6711a4c39935c 311 PIRSF PIRSF000446 1 311 6.3E-135 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DDU33_09700 02399d18086c8a36579e9fddc3eab087 405 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 4 404 24.276 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DDU33_09700 02399d18086c8a36579e9fddc3eab087 405 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 403 3.3E-155 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DDU33_09700 02399d18086c8a36579e9fddc3eab087 405 Pfam PF03616 Sodium/glutamate symporter 5 373 5.8E-142 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 SUPERFAMILY SSF109604 20 201 9.42E-45 T 14-10-2018 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 SUPERFAMILY SSF81271 392 458 6.54E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 SMART SM00954 246 356 9.2E-65 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 SUPERFAMILY SSF55021 657 729 1.45E-11 T 14-10-2018 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Gene3D G3DSA:1.10.3210.10 25 201 1.5E-35 T 14-10-2018 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Gene3D G3DSA:3.30.460.10 204 336 1.6E-45 T 14-10-2018 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Pfam PF13328 HD domain 42 185 1.9E-35 T 14-10-2018 IPR003607 HD/PDEase domain DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 SUPERFAMILY SSF81301 190 403 8.17E-59 T 14-10-2018 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 59 729 2.2E-182 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Gene3D G3DSA:3.30.70.260 655 731 3.5E-16 T 14-10-2018 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Gene3D G3DSA:3.10.20.30 393 466 1.9E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Pfam PF04607 Region found in RelA / SpoT proteins 246 355 2.2E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Pfam PF13291 ACT domain 656 729 2.9E-15 T 14-10-2018 IPR002912 ACT domain DDU33_07075 6b3c8400d7594158c54c4637b33633c0 731 Pfam PF02824 TGS domain 399 458 1.6E-22 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DDU33_07280 2d272221b4b15c4ba11dd2611f6e3cde 583 PIRSF PIRSF029745 1 583 2.7E-148 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 DDU33_07280 2d272221b4b15c4ba11dd2611f6e3cde 583 Pfam PF08479 POTRA domain, ShlB-type 82 161 4.4E-16 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type DDU33_07280 2d272221b4b15c4ba11dd2611f6e3cde 583 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 229 547 1.9E-104 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal DDU33_07280 2d272221b4b15c4ba11dd2611f6e3cde 583 Gene3D G3DSA:2.40.160.50 197 583 4.0E-99 T 14-10-2018 DDU33_07280 2d272221b4b15c4ba11dd2611f6e3cde 583 Pfam PF17287 POTRA domain 178 220 3.0E-14 T 14-10-2018 IPR035251 ShlB, POTRA domain DDU33_07280 2d272221b4b15c4ba11dd2611f6e3cde 583 Gene3D G3DSA:3.10.20.310 102 163 3.4E-5 T 14-10-2018 DDU33_09935 17a028ec6c3dc656bc274c97a3459ddc 474 Pfam PF00367 phosphotransferase system, EIIB 13 45 8.2E-16 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDU33_09935 17a028ec6c3dc656bc274c97a3459ddc 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 9 464 2.8E-205 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 DDU33_09935 17a028ec6c3dc656bc274c97a3459ddc 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 23 40 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDU33_09935 17a028ec6c3dc656bc274c97a3459ddc 474 Gene3D G3DSA:3.30.1360.60 7 80 4.8E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DDU33_09935 17a028ec6c3dc656bc274c97a3459ddc 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 32 113 7.5E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDU33_09935 17a028ec6c3dc656bc274c97a3459ddc 474 SUPERFAMILY SSF55604 11 84 4.05E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DDU33_09935 17a028ec6c3dc656bc274c97a3459ddc 474 Pfam PF02378 Phosphotransferase system, EIIC 114 408 2.7E-34 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 Gene3D G3DSA:1.10.3210.10 312 504 2.0E-57 T 14-10-2018 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 Gene3D G3DSA:3.30.420.40 16 305 6.2E-92 T 14-10-2018 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 Gene3D G3DSA:3.30.420.150 119 297 6.2E-92 T 14-10-2018 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 Pfam PF02541 Ppx/GppA phosphatase family 28 309 3.5E-91 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 SUPERFAMILY SSF53067 139 308 2.78E-42 T 14-10-2018 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 SUPERFAMILY SSF53067 15 135 1.1E-35 T 14-10-2018 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 SUPERFAMILY SSF109604 315 502 4.19E-46 T 14-10-2018 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 15 307 1.4E-95 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 DDU33_07715 b351a68da62b94459534ed33a1b01b86 505 PIRSF PIRSF001267 6 505 9.4E-195 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-9 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 PRINTS PR01249 Ribosomal protein L31 signature 61 79 1.9E-9 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 PRINTS PR01249 Ribosomal protein L31 signature 46 61 1.9E-9 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 Gene3D G3DSA:2.30.170.50 1 84 4.5E-16 T 14-10-2018 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 ProSitePatterns PS01143 Ribosomal protein L31 signature. 50 71 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 Pfam PF01197 Ribosomal protein L31 1 80 8.4E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 82 25.329 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_01835 4103b1715fdd4f2acb93a19851d4a06a 89 SUPERFAMILY SSF143800 1 81 6.67E-16 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 Gene3D G3DSA:3.40.50.10490 12 504 1.5E-235 T 14-10-2018 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 Gene3D G3DSA:1.10.1390.10 505 545 1.6E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 Pfam PF00342 Phosphoglucose isomerase 50 539 1.2E-260 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 SUPERFAMILY SSF53697 5 545 5.56E-225 T 14-10-2018 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 Gene3D G3DSA:3.40.50.10490 96 289 1.5E-235 T 14-10-2018 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 3.0E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 3.0E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 3.0E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 3.0E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 148 167 3.0E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 3.0E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_10785 d5e3e91c34686f271041336ccd66a052 546 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 522 42.67 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09580 874df062dd5215a7c7ef2fa3d9d6ecd0 194 SUPERFAMILY SSF53697 1 189 1.5E-52 T 14-10-2018 DDU33_09580 874df062dd5215a7c7ef2fa3d9d6ecd0 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.35 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DDU33_09580 874df062dd5215a7c7ef2fa3d9d6ecd0 194 Pfam PF13580 SIS domain 12 146 7.0E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDU33_09580 874df062dd5215a7c7ef2fa3d9d6ecd0 194 Gene3D G3DSA:3.40.50.10490 1 192 2.1E-70 T 14-10-2018 DDU33_09580 874df062dd5215a7c7ef2fa3d9d6ecd0 194 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 3.0E-85 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DDU33_02605 d864e2314553d5368308fe77e14b1ea5 128 SUPERFAMILY SSF81343 2 128 1.64E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02605 d864e2314553d5368308fe77e14b1ea5 128 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 117 9.0E-35 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDU33_02605 d864e2314553d5368308fe77e14b1ea5 128 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 127 26.5 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDU33_02605 d864e2314553d5368308fe77e14b1ea5 128 Gene3D G3DSA:1.20.1300.10 2 128 5.2E-39 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02605 d864e2314553d5368308fe77e14b1ea5 128 Pfam PF02300 Fumarate reductase subunit C 3 127 9.4E-46 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDU33_02605 d864e2314553d5368308fe77e14b1ea5 128 PIRSF PIRSF000180 2 128 1.3E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 Gene3D G3DSA:2.40.180.10 10 483 4.7E-223 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 SMART SM01060 15 397 1.2E-285 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 Pfam PF00199 Catalase 15 394 1.3E-192 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 PRINTS PR00067 Catalase signature 111 128 3.4E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 PRINTS PR00067 Catalase signature 130 148 3.4E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 PRINTS PR00067 Catalase signature 294 321 3.4E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 PRINTS PR00067 Catalase signature 90 108 3.4E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 PRINTS PR00067 Catalase signature 326 352 3.4E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 PRINTS PR00067 Catalase signature 28 51 3.4E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 Pfam PF06628 Catalase-related immune-responsive 420 481 5.2E-18 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 SUPERFAMILY SSF56634 4 482 6.28E-210 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 339 347 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 PIRSF PIRSF038928 6 483 1.9E-222 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_06505 a422cfa0e669e906c52ad1dbd670762f 483 ProSitePatterns PS00438 Catalase proximal active site signature. 51 67 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DDU33_10465 a39a773bf1738857fe4671bc98793ba2 504 Pfam PF00474 Sodium:solute symporter family 35 441 5.1E-133 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DDU33_10465 a39a773bf1738857fe4671bc98793ba2 504 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site DDU33_10465 a39a773bf1738857fe4671bc98793ba2 504 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 498 3.2E-204 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 DDU33_10465 a39a773bf1738857fe4671bc98793ba2 504 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 441 1.0E-120 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DDU33_10465 a39a773bf1738857fe4671bc98793ba2 504 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 423 443 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site DDU33_10465 a39a773bf1738857fe4671bc98793ba2 504 Gene3D G3DSA:1.20.1730.10 22 502 3.0E-101 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 SUPERFAMILY SSF48179 184 336 4.69E-57 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 PIRSF PIRSF000114 2 336 2.5E-101 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 178 202 3.8E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 3.8E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 203 227 3.8E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 3.8E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 11 28 3.8E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 61 88 3.8E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 9 164 2.9E-50 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 Gene3D G3DSA:3.40.50.720 2 188 9.0E-57 T 14-10-2018 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 7 327 37.841 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 193 214 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 SUPERFAMILY SSF51735 9 184 1.5E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 Gene3D G3DSA:1.10.1040.10 189 331 2.9E-51 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDU33_01730 f2bb165e1b088c4142f29b06d6fc33dd 336 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 185 324 1.6E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 7.8E-33 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 7.8E-33 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 PRINTS PR01650 Bacterial translocase SecE signature 119 135 7.8E-33 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 7.8E-33 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 80 132 2.6E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 Gene3D G3DSA:1.20.5.1030 76 133 1.3E-15 T 14-10-2018 IPR038379 SecE superfamily DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 80 132 6.4E-19 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_03400 e9780caca527b243c7ad044b52a1a947 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 12.897 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_06860 72534c2f44298b121e77c78ec5fe459a 361 SUPERFAMILY SSF51726 9 359 1.14E-80 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_06860 72534c2f44298b121e77c78ec5fe459a 361 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 157 338 1.2E-11 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDU33_06860 72534c2f44298b121e77c78ec5fe459a 361 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 10 82 8.4E-7 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDU33_06860 72534c2f44298b121e77c78ec5fe459a 361 Gene3D G3DSA:3.20.20.210 2 361 1.7E-115 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 721 5.2E-261 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SMART SM00357 86 144 2.0E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 Gene3D G3DSA:2.40.50.140 64 147 7.5E-17 T 14-10-2018 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SUPERFAMILY SSF50249 139 235 2.4E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 Hamap MF_01895 Ribonuclease R [rnr]. 38 722 57.614 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SUPERFAMILY SSF50249 642 721 1.12E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 Pfam PF00575 S1 RNA binding domain 641 720 1.2E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SMART SM00316 80 156 11.0 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SMART SM00316 640 722 6.0E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SUPERFAMILY SSF50249 219 640 1.48E-143 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SUPERFAMILY SSF50249 67 145 1.72E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 722 3.8E-269 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 1.8E-9 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 Pfam PF08206 Ribonuclease B OB domain 87 143 1.7E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 ProSitePatterns PS01175 Ribonuclease II family signature. 553 577 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 Gene3D G3DSA:2.40.50.140 643 779 3.0E-19 T 14-10-2018 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 SMART SM00955 259 586 3.0E-185 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DDU33_01315 99b1fdaf9de0ce38c0b7fc47eab77287 779 Pfam PF00773 RNB domain 259 585 3.3E-106 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 Pfam PF00849 RNA pseudouridylate synthase 105 252 2.6E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 143 157 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 SMART SM00363 23 82 4.8E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 SUPERFAMILY SSF55120 97 317 1.42E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 Gene3D G3DSA:3.10.290.10 11 75 3.6E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 317 1.2E-97 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 SUPERFAMILY SSF55174 22 73 1.0E-8 T 14-10-2018 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 Pfam PF01479 S4 domain 23 69 1.4E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_00980 a631d3cc82b415c78b3889d53f9563d1 320 Gene3D G3DSA:3.30.2350.10 95 320 5.6E-85 T 14-10-2018 DDU33_05885 327eaff26cbdb43a87d64ee03bd2f781 247 Pfam PF02698 DUF218 domain 80 242 2.8E-25 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DDU33_05885 327eaff26cbdb43a87d64ee03bd2f781 247 Gene3D G3DSA:3.40.50.620 57 205 1.8E-7 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 Gene3D G3DSA:3.90.400.10 111 166 3.9E-23 T 14-10-2018 DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 Gene3D G3DSA:3.20.20.80 167 469 1.9E-112 T 14-10-2018 DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 Gene3D G3DSA:3.20.20.80 2 110 2.3E-49 T 14-10-2018 DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 6 543 3.5E-251 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 Pfam PF00128 Alpha amylase, catalytic domain 29 366 8.9E-120 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 Gene3D G3DSA:2.60.40.1180 470 545 2.1E-12 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 SUPERFAMILY SSF51445 5 466 1.53E-147 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 SMART SM00642 14 408 3.1E-143 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_09930 03abd19b7285bfa3b694b003aec15704 546 SUPERFAMILY SSF51011 469 544 3.44E-12 T 14-10-2018 DDU33_00190 b21e3836b7bad089bcd8b5615c90c2aa 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_00190 b21e3836b7bad089bcd8b5615c90c2aa 86 SUPERFAMILY SSF54862 5 75 1.33E-17 T 14-10-2018 DDU33_00190 b21e3836b7bad089bcd8b5615c90c2aa 86 Pfam PF00037 4Fe-4S binding domain 6 25 2.5E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_00190 b21e3836b7bad089bcd8b5615c90c2aa 86 Gene3D G3DSA:3.30.70.20 2 86 7.7E-36 T 14-10-2018 DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 SUPERFAMILY SSF51445 130 567 2.08E-124 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 Gene3D G3DSA:2.60.40.10 1 133 1.3E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 SMART SM00642 163 561 1.6E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 SUPERFAMILY SSF81296 7 143 1.46E-28 T 14-10-2018 IPR014756 Immunoglobulin E-set DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 SUPERFAMILY SSF51011 575 640 4.24E-6 T 14-10-2018 DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 Gene3D G3DSA:2.60.40.1180 576 660 1.3E-12 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 Pfam PF00128 Alpha amylase, catalytic domain 185 298 1.1E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 Gene3D G3DSA:3.20.20.80 134 575 1.0E-176 T 14-10-2018 DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 640 1.1E-257 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 DDU33_08320 c1bb5bce633406df52d3e4347039e696 660 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 96 2.9E-14 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 SUPERFAMILY SSF52518 372 562 3.84E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 Gene3D G3DSA:3.40.50.970 369 565 7.0E-55 T 14-10-2018 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 SUPERFAMILY SSF52518 4 195 2.46E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 544 1.1E-9 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 439 5.1E-137 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 PIRSF PIRSF004983 1 568 8.7E-173 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 Gene3D G3DSA:3.40.50.970 1 175 3.9E-56 T 14-10-2018 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 562 31.138 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 184 3.2E-31 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 Gene3D G3DSA:3.40.50.1220 221 345 1.3E-37 T 14-10-2018 DDU33_00890 b301716cffe381f0dfb1f2bb9e140ec6 568 Pfam PF16582 Middle domain of thiamine pyrophosphate 191 397 6.1E-79 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 SUPERFAMILY SSF47781 567 639 4.22E-20 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 SUPERFAMILY SSF47781 477 563 7.56E-28 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Gene3D G3DSA:1.10.10.650 1 112 4.8E-40 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 SUPERFAMILY SSF158832 4 324 3.53E-120 T 14-10-2018 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 SUPERFAMILY SSF50249 644 731 2.24E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 SMART SM00316 656 727 2.2E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 SMART SM00732 329 431 5.6E-31 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Pfam PF16921 Tex protein YqgF-like domain 330 458 7.6E-50 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Pfam PF12836 Helix-hairpin-helix motif 498 562 2.7E-28 T 14-10-2018 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Gene3D G3DSA:3.30.420.140 328 458 1.7E-152 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Gene3D G3DSA:1.10.3500.10 115 505 1.7E-152 T 14-10-2018 IPR023323 Tex-like domain superfamily DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Pfam PF09371 Tex-like protein N-terminal domain 12 195 8.9E-69 T 14-10-2018 IPR018974 Tex-like protein, N-terminal DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Gene3D G3DSA:1.10.150.310 506 637 1.1E-50 T 14-10-2018 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Pfam PF00575 S1 RNA binding domain 655 727 4.5E-23 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 Gene3D G3DSA:2.40.50.140 638 732 3.9E-29 T 14-10-2018 DDU33_05100 15a0cd79fe60b78b0d55fb4424fb38ce 778 SUPERFAMILY SSF53098 325 476 7.02E-46 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_02810 b85d09865806982087275536e734d8dc 401 SUPERFAMILY SSF52540 3 204 1.07E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02810 b85d09865806982087275536e734d8dc 401 Pfam PF13635 Domain of unknown function (DUF4143) 235 343 1.5E-8 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 DDU33_02810 b85d09865806982087275536e734d8dc 401 Gene3D G3DSA:3.40.50.300 2 144 9.3E-8 T 14-10-2018 DDU33_02810 b85d09865806982087275536e734d8dc 401 Pfam PF13173 AAA domain 22 152 5.4E-34 T 14-10-2018 DDU33_02810 b85d09865806982087275536e734d8dc 401 SUPERFAMILY SSF52980 302 393 2.49E-9 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDU33_07500 1c23b0526d1824099bf08bd571796f04 390 SUPERFAMILY SSF103473 4 381 2.22E-54 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_07500 1c23b0526d1824099bf08bd571796f04 390 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 28.77 T 14-10-2018 IPR023495 Sugar efflux transporter, putative DDU33_07500 1c23b0526d1824099bf08bd571796f04 390 Gene3D G3DSA:1.20.1250.20 10 382 1.9E-41 T 14-10-2018 DDU33_07500 1c23b0526d1824099bf08bd571796f04 390 Pfam PF07690 Major Facilitator Superfamily 20 347 6.1E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 Pfam PF03412 Peptidase C39 family 4 129 2.4E-28 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 SUPERFAMILY SSF90123 142 453 2.09E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 Pfam PF00664 ABC transporter transmembrane region 157 424 2.2E-58 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 10 706 0.0 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 Gene3D G3DSA:1.20.1560.10 141 454 1.3E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 Pfam PF00005 ABC transporter 485 634 5.3E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 SMART SM00382 494 680 7.6E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08400 8985c808e81309f1d14ca887a9789540 707 ProSitePatterns PS00211 ABC transporters family signature. 606 620 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 Gene3D G3DSA:3.90.70.10 8 137 1.6E-27 T 14-10-2018 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 Gene3D G3DSA:3.40.50.300 463 707 9.3E-96 T 14-10-2018 DDU33_08400 8985c808e81309f1d14ca887a9789540 707 SUPERFAMILY SSF52540 459 705 6.99E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08750 9f9287cbfaad8db31937a1dbb0731a25 241 PIRSF PIRSF006325 1 241 2.0E-122 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DDU33_08750 9f9287cbfaad8db31937a1dbb0731a25 241 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 3 241 4.3E-126 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DDU33_08750 9f9287cbfaad8db31937a1dbb0731a25 241 Gene3D G3DSA:3.40.50.150 17 241 3.1E-62 T 14-10-2018 DDU33_08750 9f9287cbfaad8db31937a1dbb0731a25 241 Pfam PF13649 Methyltransferase domain 59 157 2.4E-12 T 14-10-2018 DDU33_08750 9f9287cbfaad8db31937a1dbb0731a25 241 SUPERFAMILY SSF53335 19 241 4.85E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_08750 9f9287cbfaad8db31937a1dbb0731a25 241 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 2 241 43.37 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 Gene3D G3DSA:3.10.580.10 192 311 6.3E-31 T 14-10-2018 DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 SUPERFAMILY SSF54631 256 308 1.91E-6 T 14-10-2018 DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 308 4.8E-119 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 Pfam PF01380 SIS domain 37 168 7.4E-31 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 Gene3D G3DSA:3.40.50.10490 1 191 1.2E-66 T 14-10-2018 DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 SUPERFAMILY SSF53697 2 276 1.25E-63 T 14-10-2018 DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 Pfam PF00571 CBS domain 197 251 5.9E-9 T 14-10-2018 IPR000644 CBS domain DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 Pfam PF00571 CBS domain 263 307 7.3E-5 T 14-10-2018 IPR000644 CBS domain DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 SMART SM00116 269 311 29.0 T 14-10-2018 IPR000644 CBS domain DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 SMART SM00116 204 251 0.012 T 14-10-2018 IPR000644 CBS domain DDU33_02190 322f7a2c8e7e0e12d7e27e72580a4460 311 PIRSF PIRSF004692 1 311 5.0E-127 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 59.359 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 6.5E-63 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 Gene3D G3DSA:3.30.420.40 255 501 1.9E-94 T 14-10-2018 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 1.1E-230 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.2E-89 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 PIRSF PIRSF000538 4 503 7.3E-180 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 Gene3D G3DSA:3.30.420.40 2 254 1.9E-113 T 14-10-2018 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 SUPERFAMILY SSF53067 256 497 3.33E-86 T 14-10-2018 DDU33_03310 f9a9b3c064166b116014c22bacbec138 503 SUPERFAMILY SSF53067 5 256 1.73E-97 T 14-10-2018 DDU33_10575 8f3aef12d5f4bfb1c47676eac694ac77 316 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 50.627 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 DDU33_10575 8f3aef12d5f4bfb1c47676eac694ac77 316 PIRSF PIRSF026649 10 313 2.2E-93 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDU33_10575 8f3aef12d5f4bfb1c47676eac694ac77 316 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 313 3.0E-133 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 DDU33_10575 8f3aef12d5f4bfb1c47676eac694ac77 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 305 2.4E-96 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 Pfam PF01678 Diaminopimelate epimerase 3 122 1.9E-35 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 Pfam PF01678 Diaminopimelate epimerase 152 266 1.6E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 272 3.1E-102 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 Gene3D G3DSA:3.10.310.10 3 269 1.0E-105 T 14-10-2018 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 SUPERFAMILY SSF54506 2 273 5.3E-58 T 14-10-2018 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 38.981 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DDU33_02535 8f2ac76812473afaa242dc779242cffa 274 Gene3D G3DSA:3.10.310.10 115 261 1.0E-105 T 14-10-2018 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 42 56 4.0E-7 T 14-10-2018 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 137 161 4.0E-7 T 14-10-2018 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 108 120 4.0E-7 T 14-10-2018 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 Pfam PF05175 Methyltransferase small domain 39 159 4.0E-16 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 Gene3D G3DSA:3.40.50.150 4 230 4.8E-52 T 14-10-2018 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 111 117 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 5 233 49.891 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 DDU33_01535 8a9554297731023218878f8162cc9bf9 233 SUPERFAMILY SSF53335 38 170 8.44E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_01780 6b65e2c101eec3850821dd9001e4cdb5 262 Gene3D G3DSA:3.20.20.140 4 262 5.1E-103 T 14-10-2018 DDU33_01780 6b65e2c101eec3850821dd9001e4cdb5 262 PIRSF PIRSF005902 2 262 1.2E-81 T 14-10-2018 IPR001130 TatD family GO:0016788 DDU33_01780 6b65e2c101eec3850821dd9001e4cdb5 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 6 14 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDU33_01780 6b65e2c101eec3850821dd9001e4cdb5 262 SUPERFAMILY SSF51556 5 261 6.01E-92 T 14-10-2018 IPR032466 Metal-dependent hydrolase DDU33_01780 6b65e2c101eec3850821dd9001e4cdb5 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 195 211 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDU33_01780 6b65e2c101eec3850821dd9001e4cdb5 262 Pfam PF01026 TatD related DNase 7 259 5.7E-82 T 14-10-2018 IPR001130 TatD family GO:0016788 DDU33_01780 6b65e2c101eec3850821dd9001e4cdb5 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 6 259 9.3E-99 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DDU33_09590 257359be8774a44d48860dba0917d390 426 Pfam PF03222 Tryptophan/tyrosine permease family 26 411 5.7E-8 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DDU33_08185 80c045973535c0e58f2d1ef39ef8370b 514 Gene3D G3DSA:3.30.420.10 2 197 8.2E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_08185 80c045973535c0e58f2d1ef39ef8370b 514 Gene3D G3DSA:2.30.30.450 210 351 4.1E-54 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily DDU33_08185 80c045973535c0e58f2d1ef39ef8370b 514 Gene3D G3DSA:1.20.1280.70 357 418 3.2E-25 T 14-10-2018 DDU33_08185 80c045973535c0e58f2d1ef39ef8370b 514 SUPERFAMILY SSF53098 6 471 2.07E-132 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_08185 80c045973535c0e58f2d1ef39ef8370b 514 Pfam PF00929 Exonuclease 9 189 8.2E-28 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDU33_08185 80c045973535c0e58f2d1ef39ef8370b 514 Pfam PF08411 Exonuclease C-terminal 208 469 6.6E-104 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 DDU33_08185 80c045973535c0e58f2d1ef39ef8370b 514 PIRSF PIRSF000977 1 476 3.9E-200 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 Gene3D G3DSA:3.40.50.2300 1 122 8.7E-42 T 14-10-2018 DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 SUPERFAMILY SSF46894 118 218 4.25E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 1.0E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 SMART SM00862 147 218 2.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 Gene3D G3DSA:1.10.10.10 124 224 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 SMART SM00448 1 112 4.5E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_04585 73aac0a7fcfa8dad8457b417b2a2584b 225 SUPERFAMILY SSF52172 1 129 7.26E-38 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_07165 2d7e6083b8d59c83acade03e66d3ae0a 827 Pfam PF00593 TonB dependent receptor 288 826 2.3E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DDU33_07165 2d7e6083b8d59c83acade03e66d3ae0a 827 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 810 827 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site DDU33_07165 2d7e6083b8d59c83acade03e66d3ae0a 827 SUPERFAMILY SSF56935 65 827 3.0E-68 T 14-10-2018 DDU33_07165 2d7e6083b8d59c83acade03e66d3ae0a 827 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 162 5.4E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_07165 2d7e6083b8d59c83acade03e66d3ae0a 827 Gene3D G3DSA:2.40.170.20 179 827 1.8E-115 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DDU33_07165 2d7e6083b8d59c83acade03e66d3ae0a 827 Gene3D G3DSA:2.170.130.10 59 178 2.7E-16 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_07165 2d7e6083b8d59c83acade03e66d3ae0a 827 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 50 827 2.6E-150 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 DDU33_02550 1e35b11023d97bbf8624c12202522efa 355 Gene3D G3DSA:1.20.1250.20 6 354 3.7E-19 T 14-10-2018 DDU33_02550 1e35b11023d97bbf8624c12202522efa 355 SUPERFAMILY SSF103473 7 349 1.83E-21 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_02550 1e35b11023d97bbf8624c12202522efa 355 Pfam PF07690 Major Facilitator Superfamily 13 343 3.7E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82714 184 265 2.62E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:3.30.70.1320 134 326 7.1E-276 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:3.30.2090.10 701 789 7.1E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82693 656 835 1.57E-12 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82693 138 324 1.92E-18 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:3.30.70.1430 40 797 7.1E-276 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:1.20.1640.10 10 503 7.1E-276 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82693 41 133 9.42E-22 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82714 708 788 1.16E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1011 4.7E-254 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:3.30.2090.10 178 269 7.1E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:3.30.70.1430 558 650 7.1E-276 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82866 811 1012 4.97E-45 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:3.30.70.1440 651 844 7.1E-276 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82693 556 651 6.28E-16 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 Gene3D G3DSA:1.20.1640.10 504 1008 7.1E-276 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 SUPERFAMILY SSF82866 303 489 3.79E-43 T 14-10-2018 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_07535 b462c000e795679e79d989a95b74837b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 Gene3D G3DSA:3.40.190.10 108 281 3.4E-49 T 14-10-2018 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 Gene3D G3DSA:3.30.70.260 291 378 5.3E-27 T 14-10-2018 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 SUPERFAMILY SSF55021 280 378 1.07E-24 T 14-10-2018 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 Pfam PF00800 Prephenate dehydratase 106 286 4.6E-53 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 SUPERFAMILY SSF53850 105 291 1.09E-50 T 14-10-2018 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 SUPERFAMILY SSF48600 4 93 2.01E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 5 89 1.1E-36 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 Pfam PF01817 Chorismate mutase type II 9 89 1.1E-14 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 Gene3D G3DSA:1.20.59.10 2 107 1.2E-30 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 PIRSF PIRSF001500 1 380 6.7E-137 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 Gene3D G3DSA:3.40.190.10 189 274 3.4E-49 T 14-10-2018 DDU33_05770 5942cbe2978eb301d5a20b97682e37ea 385 SMART SM00830 9 91 9.0E-22 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_08220 ab3b241325519ab84cca83e6bc6aa7dc 214 SUPERFAMILY SSF47616 82 206 1.89E-21 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DDU33_08220 ab3b241325519ab84cca83e6bc6aa7dc 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 4.4E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDU33_08220 ab3b241325519ab84cca83e6bc6aa7dc 214 SUPERFAMILY SSF52833 12 110 6.3E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_08220 ab3b241325519ab84cca83e6bc6aa7dc 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 195 2.9E-5 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal DDU33_08220 ab3b241325519ab84cca83e6bc6aa7dc 214 Gene3D G3DSA:1.20.1050.10 89 194 8.3E-75 T 14-10-2018 DDU33_08220 ab3b241325519ab84cca83e6bc6aa7dc 214 Gene3D G3DSA:3.40.30.10 12 201 8.3E-75 T 14-10-2018 DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 SUPERFAMILY SSF50331 242 348 5.32E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 289 348 1.9E-17 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 Pfam PF00005 ABC transporter 17 154 3.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 Pfam PF03459 TOBE domain 289 349 4.3E-16 T 14-10-2018 IPR005116 Transport-associated OB, type 1 DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 Gene3D G3DSA:2.40.50.100 288 349 1.6E-13 T 14-10-2018 DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 SMART SM00382 23 204 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 SUPERFAMILY SSF52540 8 221 1.67E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 Gene3D G3DSA:3.40.50.300 4 229 1.6E-57 T 14-10-2018 DDU33_06745 56d6c5aaff091ad28018cff7730a74bd 349 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 349 2.0E-129 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 SUPERFAMILY SSF53335 20 273 8.6E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 44 71 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 Gene3D G3DSA:1.10.8.100 208 275 4.0E-27 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 Pfam PF00398 Ribosomal RNA adenine dimethylase 12 271 9.5E-85 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 12 272 57.481 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 13 271 5.0E-92 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 Gene3D G3DSA:3.40.50.150 4 207 1.1E-66 T 14-10-2018 DDU33_09495 de5c613657a78f61f037a8bde3ab9b8d 289 SMART SM00650 28 205 3.3E-88 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DDU33_05640 858934e60730c141122c9a01a694232d 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 188 3.8E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_05640 858934e60730c141122c9a01a694232d 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 3.7E-24 T 14-10-2018 DDU33_05640 858934e60730c141122c9a01a694232d 206 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 10 191 7.9E-57 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase DDU33_05640 858934e60730c141122c9a01a694232d 206 SUPERFAMILY SSF56784 10 193 5.47E-43 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_05640 858934e60730c141122c9a01a694232d 206 Gene3D G3DSA:1.10.150.240 23 95 5.8E-46 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DDU33_05640 858934e60730c141122c9a01a694232d 206 Gene3D G3DSA:3.40.50.1000 11 199 5.8E-46 T 14-10-2018 IPR023214 HAD superfamily DDU33_02480 b394a508af4794ea0f05ccb3f8bbe08a 187 Pfam PF17311 Family of unknown function (DUF5358) 28 187 1.6E-80 T 14-10-2018 IPR035279 Protein of unknown function DUF5358 DDU33_02480 b394a508af4794ea0f05ccb3f8bbe08a 187 ProDom PD104362 PM1073 HI0966 27 187 2.0E-62 T 14-10-2018 IPR035279 Protein of unknown function DUF5358 DDU33_01360 4ff698b89f355ce24088525d7e2e095c 916 Pfam PF00534 Glycosyl transferases group 1 742 885 7.5E-20 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DDU33_01360 4ff698b89f355ce24088525d7e2e095c 916 SUPERFAMILY SSF53756 527 887 1.17E-38 T 14-10-2018 DDU33_01360 4ff698b89f355ce24088525d7e2e095c 916 SUPERFAMILY SSF53756 236 511 3.09E-18 T 14-10-2018 DDU33_01360 4ff698b89f355ce24088525d7e2e095c 916 Pfam PF13692 Glycosyl transferases group 1 357 479 1.5E-8 T 14-10-2018 DDU33_01360 4ff698b89f355ce24088525d7e2e095c 916 Gene3D G3DSA:3.40.50.2000 315 499 1.2E-13 T 14-10-2018 DDU33_01360 4ff698b89f355ce24088525d7e2e095c 916 Gene3D G3DSA:3.40.50.2000 735 890 7.7E-21 T 14-10-2018 DDU33_01085 1a94fe8771c9124af9289bdb2217e0f4 165 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 5.9E-84 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 DDU33_01085 1a94fe8771c9124af9289bdb2217e0f4 165 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.21 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 DDU33_01085 1a94fe8771c9124af9289bdb2217e0f4 165 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 5.8E-61 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 DDU33_01085 1a94fe8771c9124af9289bdb2217e0f4 165 Pfam PF03737 Aldolase/RraA 7 152 1.5E-36 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DDU33_01085 1a94fe8771c9124af9289bdb2217e0f4 165 Gene3D G3DSA:3.50.30.40 1 161 5.4E-58 T 14-10-2018 DDU33_01085 1a94fe8771c9124af9289bdb2217e0f4 165 SUPERFAMILY SSF89562 1 158 1.7E-43 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 Gene3D G3DSA:1.10.1060.10 379 452 6.4E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 424 435 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 20 453 6.7E-179 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 SUPERFAMILY SSF142019 102 311 7.59E-58 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 148 291 1.1E-46 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 755 240.089 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 Pfam PF10531 SLBB domain 304 352 9.4E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 Gene3D G3DSA:3.40.50.11540 152 291 1.5E-15 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 SUPERFAMILY SSF46548 343 451 6.02E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 Pfam PF12838 4Fe-4S dicluster domain 384 436 7.3E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_10545 d74996da6c5fe07d105f97ed176bc988 755 Pfam PF13375 RnfC Barrel sandwich hybrid domain 21 123 7.8E-34 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain DDU33_06595 75a4de394fd622a010ffd6996d55165b 310 Gene3D G3DSA:3.40.190.290 126 308 1.0E-20 T 14-10-2018 DDU33_06595 75a4de394fd622a010ffd6996d55165b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 39 97 1.1E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_06595 75a4de394fd622a010ffd6996d55165b 310 SUPERFAMILY SSF53850 127 309 1.48E-23 T 14-10-2018 DDU33_06595 75a4de394fd622a010ffd6996d55165b 310 Pfam PF03466 LysR substrate binding domain 129 307 1.0E-17 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_06595 75a4de394fd622a010ffd6996d55165b 310 Gene3D G3DSA:1.10.10.10 36 124 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06595 75a4de394fd622a010ffd6996d55165b 310 SUPERFAMILY SSF46785 36 119 4.44E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_01245 2ef55ba0eb61f1cba533085cff7a2ed3 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDU33_01245 2ef55ba0eb61f1cba533085cff7a2ed3 202 Gene3D G3DSA:1.10.357.10 14 201 1.1E-51 T 14-10-2018 DDU33_01245 2ef55ba0eb61f1cba533085cff7a2ed3 202 SUPERFAMILY SSF46689 9 80 3.84E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_01245 2ef55ba0eb61f1cba533085cff7a2ed3 202 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 202 35.314 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 DDU33_01245 2ef55ba0eb61f1cba533085cff7a2ed3 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 67 1.7E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 6 809 106.036 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 476 485 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 185 200 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 779 795 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 366 380 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 380 400 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 318 334 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 224 246 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 763 775 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 9 19 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR01159 DNA gyrase subunit B signature 200 213 5.7E-77 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 SUPERFAMILY SSF56719 400 801 1.12E-87 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 178 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Gene3D G3DSA:3.30.565.10 5 224 1.7E-95 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 738 799 9.4E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 SUPERFAMILY SSF55874 8 224 1.2E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 SUPERFAMILY SSF54211 225 398 4.93E-60 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 9 808 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 SMART SM00433 39 803 2.4E-283 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Pfam PF01751 Toprim domain 425 537 1.8E-18 T 14-10-2018 IPR006171 TOPRIM domain DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 SMART SM00387 35 179 2.3E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Gene3D G3DSA:3.40.50.670 404 571 3.2E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Gene3D G3DSA:3.40.50.670 694 809 4.1E-27 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 426 440 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 39 54 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 493 509 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 742 758 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 531 543 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 117 131 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 511 528 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 74 87 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 PRINTS PR00418 DNA topoisomerase II family signature 272 285 1.1E-72 T 14-10-2018 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Gene3D G3DSA:3.30.230.10 225 398 5.4E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Pfam PF00204 DNA gyrase B 225 396 1.8E-59 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_09920 50d84c017bbfd7d180c63aed0587ba84 809 Gene3D G3DSA:3.10.20.690 598 689 2.6E-30 T 14-10-2018 DDU33_01610 cbd726089aeabed12acd6c1dd1fd9337 253 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 26.214 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 DDU33_01610 cbd726089aeabed12acd6c1dd1fd9337 253 Gene3D G3DSA:3.40.50.150 3 185 1.1E-21 T 14-10-2018 DDU33_01610 cbd726089aeabed12acd6c1dd1fd9337 253 SUPERFAMILY SSF53335 9 251 2.71E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_01610 cbd726089aeabed12acd6c1dd1fd9337 253 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 250 9.5E-60 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 DDU33_01610 cbd726089aeabed12acd6c1dd1fd9337 253 Pfam PF13489 Methyltransferase domain 31 148 3.4E-9 T 14-10-2018 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.6E-74 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 SUPERFAMILY SSF52283 1 168 2.13E-55 T 14-10-2018 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 Gene3D G3DSA:3.40.50.720 137 318 7.4E-157 T 14-10-2018 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 512 2.6E-295 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 Gene3D G3DSA:3.40.50.720 3 365 7.4E-157 T 14-10-2018 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 SUPERFAMILY SSF51735 138 315 1.81E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 PIRSF PIRSF000203 1 511 5.8E-278 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 511 2.2E-35 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 SMART SM01003 4 137 2.1E-72 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 SMART SM01002 146 311 5.0E-82 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DDU33_09135 b24af3730e0fdd9806ad0929604f72bd 512 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 4.1E-49 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Gene3D G3DSA:2.40.50.140 357 443 3.9E-23 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Gene3D G3DSA:2.40.50.140 268 356 3.9E-30 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Pfam PF00575 S1 RNA binding domain 273 346 6.5E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Pfam PF00575 S1 RNA binding domain 360 433 6.5E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Pfam PF00575 S1 RNA binding domain 190 259 2.8E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Pfam PF00575 S1 RNA binding domain 448 519 3.2E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Pfam PF00575 S1 RNA binding domain 102 170 2.6E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Pfam PF00575 S1 RNA binding domain 18 84 1.9E-4 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PIRSF PIRSF002111 1 533 1.9E-207 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 519 9.1E-220 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Gene3D G3DSA:2.40.50.140 444 527 1.0E-17 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Gene3D G3DSA:2.40.50.140 98 176 1.5E-7 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SUPERFAMILY SSF50249 190 276 4.48E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SUPERFAMILY SSF50249 254 370 1.29E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Gene3D G3DSA:2.40.50.140 186 267 8.1E-28 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SUPERFAMILY SSF50249 89 173 4.39E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 211 232 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 38 52 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 329 347 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 20 38 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 289 308 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 83 102 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 107 123 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 125 142 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 PRINTS PR00681 Ribosomal protein S1 signature 154 174 6.0E-90 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SMART SM00316 361 433 1.6E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SMART SM00316 448 519 2.2E-17 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SMART SM00316 189 259 7.5E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SMART SM00316 18 86 2.2E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SMART SM00316 274 346 2.4E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SMART SM00316 102 170 1.3E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 Gene3D G3DSA:2.40.50.140 3 97 2.6E-14 T 14-10-2018 DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SUPERFAMILY SSF50249 2 111 2.11E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SUPERFAMILY SSF50249 428 536 2.39E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07580 6955214d6aa0605d0d9eaf36ce062c5d 554 SUPERFAMILY SSF50249 362 445 1.43E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_08270 ab4757a19c7a35a225e5a965320bff17 153 Pfam PF02576 RimP N-terminal domain 13 83 1.6E-30 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DDU33_08270 ab4757a19c7a35a225e5a965320bff17 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.961 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DDU33_08270 ab4757a19c7a35a225e5a965320bff17 153 Gene3D G3DSA:3.30.300.70 1 80 8.8E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DDU33_08270 ab4757a19c7a35a225e5a965320bff17 153 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.7E-20 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DDU33_08270 ab4757a19c7a35a225e5a965320bff17 153 SUPERFAMILY SSF74942 84 152 7.85E-18 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DDU33_08270 ab4757a19c7a35a225e5a965320bff17 153 SUPERFAMILY SSF75420 3 83 8.11E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DDU33_03655 532c37c499e6e88051880839438f77e2 237 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 29 186 36.742 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH DDU33_03655 532c37c499e6e88051880839438f77e2 237 ProSitePatterns PS00893 Nudix box signature. 66 87 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDU33_03655 532c37c499e6e88051880839438f77e2 237 PRINTS PR00502 NUDIX hydrolase family signature 75 90 3.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDU33_03655 532c37c499e6e88051880839438f77e2 237 PRINTS PR00502 NUDIX hydrolase family signature 61 75 3.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDU33_03655 532c37c499e6e88051880839438f77e2 237 Pfam PF00293 NUDIX domain 35 175 6.6E-27 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDU33_03655 532c37c499e6e88051880839438f77e2 237 Gene3D G3DSA:3.90.79.10 28 189 1.6E-47 T 14-10-2018 DDU33_03655 532c37c499e6e88051880839438f77e2 237 SUPERFAMILY SSF55811 31 182 3.11E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 Gene3D G3DSA:3.30.930.10 11 463 1.2E-241 T 14-10-2018 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 5.7E-48 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 374 8.5E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 3.8E-280 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 SUPERFAMILY SSF55681 10 477 2.58E-104 T 14-10-2018 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 Gene3D G3DSA:3.90.960.10 240 387 1.2E-241 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 PIRSF PIRSF001535 1 571 1.7E-270 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 42.545 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 SUPERFAMILY SSF52954 462 570 9.67E-32 T 14-10-2018 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.6E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.6E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.6E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.6E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 Gene3D G3DSA:3.40.50.800 4 553 1.2E-241 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 Pfam PF03129 Anticodon binding domain 475 567 2.5E-23 T 14-10-2018 IPR004154 Anticodon-binding DDU33_03600 a487c34e10bab53c65be9122d4fcce7c 571 SUPERFAMILY SSF55826 218 388 2.62E-28 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 SUPERFAMILY SSF53271 251 486 8.92E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 467 2.3E-154 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 PIRSF PIRSF000485 1 484 7.1E-164 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 44.305 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 SUPERFAMILY SSF56235 2 258 3.6E-73 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 Gene3D G3DSA:3.60.20.10 2 415 6.2E-151 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 Pfam PF13522 Glutamine amidotransferase domain 65 209 4.3E-16 T 14-10-2018 DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 Gene3D G3DSA:3.40.50.2020 278 443 6.2E-151 T 14-10-2018 DDU33_10115 b41d9a65329bb9215d63375ffdc52423 506 Pfam PF00156 Phosphoribosyl transferase domain 295 396 1.2E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 Gene3D G3DSA:3.40.190.10 72 240 6.1E-40 T 14-10-2018 DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 Gene3D G3DSA:3.90.76.10 91 213 6.1E-40 T 14-10-2018 DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 Gene3D G3DSA:3.10.105.10 286 489 1.9E-37 T 14-10-2018 DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 PIRSF PIRSF002741 10 267 3.7E-28 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 PIRSF PIRSF002741 259 520 3.8E-35 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 101 438 2.7E-32 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 Gene3D G3DSA:3.40.190.10 265 500 1.9E-37 T 14-10-2018 DDU33_10250 2a2159802b6e699dde92f71e11b1f551 524 SUPERFAMILY SSF53850 59 508 1.99E-71 T 14-10-2018 DDU33_01030 14ca103d6c9b22a9dce4dfde1ceffc48 409 SMART SM00257 136 180 6.8E-11 T 14-10-2018 IPR018392 LysM domain DDU33_01030 14ca103d6c9b22a9dce4dfde1ceffc48 409 Pfam PF01476 LysM domain 137 178 5.8E-10 T 14-10-2018 IPR018392 LysM domain DDU33_01030 14ca103d6c9b22a9dce4dfde1ceffc48 409 SUPERFAMILY SSF51261 136 406 1.99E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_01030 14ca103d6c9b22a9dce4dfde1ceffc48 409 Pfam PF01551 Peptidase family M23 309 402 6.9E-31 T 14-10-2018 IPR016047 Peptidase M23 DDU33_01030 14ca103d6c9b22a9dce4dfde1ceffc48 409 Gene3D G3DSA:3.10.350.10 134 179 2.5E-11 T 14-10-2018 IPR036779 LysM domain superfamily DDU33_01030 14ca103d6c9b22a9dce4dfde1ceffc48 409 Gene3D G3DSA:2.70.70.10 271 407 1.5E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 SUPERFAMILY SSF47323 387 544 5.23E-46 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 SUPERFAMILY SSF50249 580 686 2.94E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Pfam PF08264 Anticodon-binding domain of tRNA 413 577 3.7E-6 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 533 7.7E-203 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 543 41.062 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Pfam PF01588 Putative tRNA binding domain 591 684 1.2E-23 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 SUPERFAMILY SSF52374 4 385 9.3E-103 T 14-10-2018 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.8E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 1.8E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.8E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 1.8E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.8E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 1.8E-26 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 539 687 3.2E-47 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Pfam PF09334 tRNA synthetases class I (M) 7 394 1.3E-163 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Gene3D G3DSA:2.40.50.140 579 687 7.4E-31 T 14-10-2018 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 SUPERFAMILY SSF57770 141 175 1.44E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Gene3D G3DSA:2.20.28.20 141 175 8.1E-159 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Gene3D G3DSA:3.40.50.620 7 382 8.1E-159 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_06770 b2af4aebb500f4c5ef0d0446e526ea6b 687 Gene3D G3DSA:1.10.730.10 387 524 1.1E-35 T 14-10-2018 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 SMART SM00938 4 105 6.7E-70 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 PIRSF PIRSF039144 1 112 6.3E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 SUPERFAMILY SSF54913 1 112 6.67E-48 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 PRINTS PR00340 P-II protein signature 83 103 2.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 PRINTS PR00340 P-II protein signature 23 41 2.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 PRINTS PR00340 P-II protein signature 2 17 2.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 PRINTS PR00340 P-II protein signature 52 75 2.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 Gene3D G3DSA:3.30.70.120 1 112 1.9E-50 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_03810 e6f92d6adb533d1cd9878274cb80d374 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DDU33_10555 99d3721839460b962a68f9b01804f298 210 SMART SM00900 100 192 1.3E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDU33_10555 99d3721839460b962a68f9b01804f298 210 Pfam PF04205 FMN-binding domain 100 188 4.4E-18 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDU33_10555 99d3721839460b962a68f9b01804f298 210 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 4 194 25.161 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DDU33_10555 99d3721839460b962a68f9b01804f298 210 PIRSF PIRSF006091 1 203 3.3E-68 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DDU33_10555 99d3721839460b962a68f9b01804f298 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 12 190 1.9E-59 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 9.6E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 9.6E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 9.6E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 365 7.9E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Gene3D G3DSA:3.40.120.10 174 361 3.6E-63 T 14-10-2018 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 1.5E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 2.7E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 SUPERFAMILY SSF55957 356 442 3.01E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Gene3D G3DSA:3.40.120.10 2 153 1.3E-48 T 14-10-2018 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Gene3D G3DSA:3.40.120.10 256 338 3.6E-63 T 14-10-2018 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 SUPERFAMILY SSF53738 2 180 1.06E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 SUPERFAMILY SSF53738 257 363 4.32E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 4.3E-194 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 SUPERFAMILY SSF53738 155 255 3.45E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 47.492 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Gene3D G3DSA:3.30.310.50 369 443 4.6E-25 T 14-10-2018 DDU33_04375 8cd1d6642f9b9a29eb21db4cf54d8236 443 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 440 1.0E-13 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_05170 5c4eb23c89bb4267582d5a22388522c2 316 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 307 5.8E-73 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 DDU33_05170 5c4eb23c89bb4267582d5a22388522c2 316 Pfam PF01699 Sodium/calcium exchanger protein 4 143 8.9E-24 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DDU33_05170 5c4eb23c89bb4267582d5a22388522c2 316 Pfam PF01699 Sodium/calcium exchanger protein 167 312 2.0E-31 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DDU33_05170 5c4eb23c89bb4267582d5a22388522c2 316 Gene3D G3DSA:1.20.1420.30 34 305 1.3E-90 T 14-10-2018 DDU33_05170 5c4eb23c89bb4267582d5a22388522c2 316 Gene3D G3DSA:1.20.58.1130 8 199 1.3E-90 T 14-10-2018 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 SMART SM01240 8 474 0.0 T 14-10-2018 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 474 6.4E-161 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 487 83.746 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 PIRSF PIRSF000130 1 488 3.6E-198 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 SUPERFAMILY SSF54631 95 204 2.15E-27 T 14-10-2018 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 SMART SM00116 97 145 1.0E-10 T 14-10-2018 IPR000644 CBS domain DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 SMART SM00116 159 207 2.2E-9 T 14-10-2018 IPR000644 CBS domain DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 296 308 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 455 5.8E-196 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 Pfam PF00571 CBS domain 150 204 2.0E-7 T 14-10-2018 IPR000644 CBS domain DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 Pfam PF00571 CBS domain 96 139 3.7E-10 T 14-10-2018 IPR000644 CBS domain DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 Gene3D G3DSA:3.20.20.70 1 487 3.4E-211 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_08780 983ab156d108f98c4fd4079697a0a523 488 SUPERFAMILY SSF51412 5 478 7.33E-126 T 14-10-2018 DDU33_05140 1c79e4c714ac55bd5ba591ab2ae233cf 545 Gene3D G3DSA:3.90.76.10 54 220 2.6E-202 T 14-10-2018 DDU33_05140 1c79e4c714ac55bd5ba591ab2ae233cf 545 Gene3D G3DSA:3.10.105.10 302 519 2.6E-202 T 14-10-2018 DDU33_05140 1c79e4c714ac55bd5ba591ab2ae233cf 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 5.7E-106 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DDU33_05140 1c79e4c714ac55bd5ba591ab2ae233cf 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 111 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DDU33_05140 1c79e4c714ac55bd5ba591ab2ae233cf 545 Gene3D G3DSA:3.40.190.10 221 532 2.6E-202 T 14-10-2018 DDU33_05140 1c79e4c714ac55bd5ba591ab2ae233cf 545 PIRSF PIRSF002741 1 544 5.1E-125 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDU33_05140 1c79e4c714ac55bd5ba591ab2ae233cf 545 SUPERFAMILY SSF53850 40 540 1.09E-157 T 14-10-2018 DDU33_09060 75089d65abf493405177262b063bfe25 350 Pfam PF01594 AI-2E family transporter 20 346 1.5E-73 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DDU33_00420 18bc96593552b16dfa499fc67633a936 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 1.8E-42 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 DDU33_00420 18bc96593552b16dfa499fc67633a936 87 PRINTS PR00160 Glutaredoxin signature 66 79 1.4E-9 T 14-10-2018 IPR014025 Glutaredoxin subgroup DDU33_00420 18bc96593552b16dfa499fc67633a936 87 PRINTS PR00160 Glutaredoxin signature 52 65 1.4E-9 T 14-10-2018 IPR014025 Glutaredoxin subgroup DDU33_00420 18bc96593552b16dfa499fc67633a936 87 PRINTS PR00160 Glutaredoxin signature 3 21 1.4E-9 T 14-10-2018 IPR014025 Glutaredoxin subgroup DDU33_00420 18bc96593552b16dfa499fc67633a936 87 Pfam PF00462 Glutaredoxin 3 69 4.7E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DDU33_00420 18bc96593552b16dfa499fc67633a936 87 Gene3D G3DSA:3.40.30.10 2 84 9.2E-22 T 14-10-2018 DDU33_00420 18bc96593552b16dfa499fc67633a936 87 SUPERFAMILY SSF52833 3 80 1.98E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_00420 18bc96593552b16dfa499fc67633a936 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 SMART SM00487 27 231 7.3E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 SUPERFAMILY SSF52540 81 360 7.34E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 Gene3D G3DSA:3.40.50.300 227 397 1.6E-46 T 14-10-2018 DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 7 386 50.708 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 SMART SM00490 267 348 1.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 Pfam PF00270 DEAD/DEAH box helicase 32 204 7.4E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 Gene3D G3DSA:3.40.50.300 2 219 4.4E-70 T 14-10-2018 DDU33_08505 e0c5b71b9e98839b5a9088bf06cae82d 404 Pfam PF00271 Helicase conserved C-terminal domain 239 348 2.4E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_00090 d44bf13993452a42206de250ce6b6cde 128 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 4 124 4.3E-50 T 14-10-2018 IPR014171 TonB system transport protein ExbD type-2 GO:0016020|GO:0055085 DDU33_00090 d44bf13993452a42206de250ce6b6cde 128 Gene3D G3DSA:3.30.420.270 56 120 5.1E-6 T 14-10-2018 DDU33_00090 d44bf13993452a42206de250ce6b6cde 128 Pfam PF02472 Biopolymer transport protein ExbD/TolR 5 124 2.1E-23 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DDU33_04095 697f56d576fac34974f0381d50f24d49 176 SUPERFAMILY SSF54637 10 173 3.87E-54 T 14-10-2018 IPR029069 HotDog domain superfamily DDU33_04095 697f56d576fac34974f0381d50f24d49 176 Gene3D G3DSA:3.10.129.10 7 176 6.0E-60 T 14-10-2018 DDU33_04095 697f56d576fac34974f0381d50f24d49 176 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 9 176 1.3E-91 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_04095 697f56d576fac34974f0381d50f24d49 176 Pfam PF07977 FabA-like domain 33 162 4.7E-52 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_04095 697f56d576fac34974f0381d50f24d49 176 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 6 176 50.178 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 Gene3D G3DSA:1.10.3120.10 116 416 8.3E-103 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 Hamap MF_00303 Trigger factor [tig]. 1 417 21.148 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 4.7E-40 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 261 411 8.5E-37 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 Gene3D G3DSA:3.10.50.40 150 246 8.3E-103 T 14-10-2018 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 237 6.1E-15 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 SUPERFAMILY SSF54534 90 242 9.23E-39 T 14-10-2018 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 PIRSF PIRSF003095 1 431 3.8E-121 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 SUPERFAMILY SSF109998 248 427 1.37E-46 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 SUPERFAMILY SSF102735 1 131 1.09E-39 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 Gene3D G3DSA:3.30.70.1050 1 115 1.8E-38 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DDU33_01715 e59afdacf8ed137de6f85a483f4ae571 431 TIGRFAM TIGR00115 tig: trigger factor 11 411 7.8E-138 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 Gene3D G3DSA:3.10.150.10 1 123 1.3E-37 T 14-10-2018 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 SUPERFAMILY SSF55979 127 245 3.14E-30 T 14-10-2018 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 Gene3D G3DSA:3.10.150.10 126 248 7.6E-37 T 14-10-2018 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 Gene3D G3DSA:3.10.150.10 249 367 9.1E-39 T 14-10-2018 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 2.6E-41 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 SUPERFAMILY SSF55979 1 119 2.74E-24 T 14-10-2018 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 4.4E-115 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 244 1.6E-38 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 PIRSF PIRSF000804 1 367 4.6E-115 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 SUPERFAMILY SSF55979 246 367 4.08E-37 T 14-10-2018 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 SMART SM00480 17 363 1.4E-145 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DDU33_04795 e7790421686f1f6a3a48afa208818b64 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.0E-34 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DDU33_06740 72a5841de94fa42cf81673225f666ebf 98 Gene3D G3DSA:3.10.20.280 1 89 7.5E-31 T 14-10-2018 IPR037021 RnfH superfamily DDU33_06740 72a5841de94fa42cf81673225f666ebf 98 Pfam PF03658 RnfH family Ubiquitin 5 87 6.3E-30 T 14-10-2018 IPR005346 RnfH protein DDU33_06740 72a5841de94fa42cf81673225f666ebf 98 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 22.818 T 14-10-2018 IPR005346 RnfH protein DDU33_06740 72a5841de94fa42cf81673225f666ebf 98 SUPERFAMILY SSF54285 4 79 6.93E-23 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DDU33_08165 a21d833397b55d9df159d38ff4a7d96f 662 SUPERFAMILY SSF161098 131 377 1.27E-41 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_08165 a21d833397b55d9df159d38ff4a7d96f 662 SUPERFAMILY SSF161098 411 657 6.54E-44 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_08165 a21d833397b55d9df159d38ff4a7d96f 662 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 482 659 9.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_08165 a21d833397b55d9df159d38ff4a7d96f 662 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 190 380 3.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_08165 a21d833397b55d9df159d38ff4a7d96f 662 Gene3D G3DSA:1.10.3720.10 121 392 7.6E-48 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_08165 a21d833397b55d9df159d38ff4a7d96f 662 Gene3D G3DSA:1.10.3720.10 407 661 1.8E-45 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_09785 c63aa099f448ab1df8ecee820f6050a0 801 SUPERFAMILY SSF56925 670 800 2.35E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_09785 c63aa099f448ab1df8ecee820f6050a0 801 Gene3D G3DSA:2.40.160.90 678 801 3.0E-17 T 14-10-2018 DDU33_04495 b92ced68775c275dbf5ba41bf70d0475 212 SUPERFAMILY SSF55469 1 204 1.2E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDU33_04495 b92ced68775c275dbf5ba41bf70d0475 212 Gene3D G3DSA:3.40.109.10 1 205 2.5E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDU33_04495 b92ced68775c275dbf5ba41bf70d0475 212 Pfam PF00881 Nitroreductase family 7 185 2.2E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DDU33_02125 042a21adc452879dedff67d03e5ab2b6 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 20.843 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02125 042a21adc452879dedff67d03e5ab2b6 59 PIRSF PIRSF002211 1 59 1.8E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02125 042a21adc452879dedff67d03e5ab2b6 59 Gene3D G3DSA:3.30.1390.20 1 59 2.1E-26 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DDU33_02125 042a21adc452879dedff67d03e5ab2b6 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site DDU33_02125 042a21adc452879dedff67d03e5ab2b6 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.4E-24 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02125 042a21adc452879dedff67d03e5ab2b6 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 3.4E-19 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DDU33_02125 042a21adc452879dedff67d03e5ab2b6 59 SUPERFAMILY SSF55129 3 59 1.44E-20 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 Pfam PF00085 Thioredoxin 5 101 2.2E-11 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 SUPERFAMILY SSF48452 106 244 1.78E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 Gene3D G3DSA:3.40.30.10 1 109 9.8E-18 T 14-10-2018 DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 Pfam PF14559 Tetratricopeptide repeat 122 189 8.0E-18 T 14-10-2018 DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 Pfam PF14561 Tetratricopeptide repeat 194 281 3.5E-22 T 14-10-2018 DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 Gene3D G3DSA:1.25.40.10 110 195 6.2E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 Gene3D G3DSA:1.25.40.10 196 281 1.1E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_00075 a26db8e865b4eeb5f778268b675cb7a5 281 SUPERFAMILY SSF52833 4 110 1.43E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_04360 5253842437752edcb4566b55977e5fcb 306 Gene3D G3DSA:3.30.1700.10 129 306 1.3E-66 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DDU33_04360 5253842437752edcb4566b55977e5fcb 306 SUPERFAMILY SSF54211 3 126 1.29E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_04360 5253842437752edcb4566b55977e5fcb 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 299 9.3E-147 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DDU33_04360 5253842437752edcb4566b55977e5fcb 306 SUPERFAMILY SSF54211 134 279 1.52E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_04360 5253842437752edcb4566b55977e5fcb 306 Gene3D G3DSA:3.30.230.20 1 128 3.7E-50 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DDU33_04360 5253842437752edcb4566b55977e5fcb 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 277 1.7E-106 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DDU33_04360 5253842437752edcb4566b55977e5fcb 306 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 281 45.751 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DDU33_01485 a0461c1e8ca381d57705dd7228a0a2c1 369 Gene3D G3DSA:3.40.50.150 12 364 4.2E-142 T 14-10-2018 DDU33_01485 a0461c1e8ca381d57705dd7228a0a2c1 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 368 42.937 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 DDU33_01485 a0461c1e8ca381d57705dd7228a0a2c1 369 Gene3D G3DSA:3.40.1350.30 42 191 4.2E-142 T 14-10-2018 DDU33_01485 a0461c1e8ca381d57705dd7228a0a2c1 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 7 367 1.3E-182 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DDU33_01485 a0461c1e8ca381d57705dd7228a0a2c1 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DDU33_01485 a0461c1e8ca381d57705dd7228a0a2c1 369 SUPERFAMILY SSF53335 4 367 1.56E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_01485 a0461c1e8ca381d57705dd7228a0a2c1 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 7 368 3.9E-179 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 Pfam PF14697 4Fe-4S dicluster domain 109 163 3.4E-17 T 14-10-2018 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 Pfam PF04060 Putative Fe-S cluster 47 78 1.4E-13 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 Gene3D G3DSA:1.10.15.40 41 82 2.4E-6 T 14-10-2018 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 SUPERFAMILY SSF54862 40 173 6.28E-29 T 14-10-2018 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 7 168 24.469 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 7 183 1.9E-78 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 PIRSF PIRSF005784 6 190 2.6E-82 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_10540 3a8a7daa883381b1e42d1999ded7c21a 203 Gene3D G3DSA:3.30.70.20 93 182 2.0E-20 T 14-10-2018 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 SUPERFAMILY SSF47005 108 152 1.83E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 Gene3D G3DSA:4.10.320.10 103 153 4.5E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 Gene3D G3DSA:2.40.50.100 2 79 2.2E-21 T 14-10-2018 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 Gene3D G3DSA:3.30.559.10 177 409 1.1E-101 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 Pfam PF00364 Biotin-requiring enzyme 4 76 2.2E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 408 2.6E-188 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 SUPERFAMILY SSF52777 179 408 2.4E-93 T 14-10-2018 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 Pfam PF02817 e3 binding domain 117 147 4.0E-10 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 179 407 3.3E-86 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DDU33_07270 d6fc583213f2729ed897ef28c27792b2 409 SUPERFAMILY SSF51230 1 81 2.62E-23 T 14-10-2018 IPR011053 Single hybrid motif DDU33_08740 064036a9bfea398061b18953f603bdb0 186 Pfam PF03925 SeqA protein C-terminal domain 75 182 2.4E-42 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 DDU33_08740 064036a9bfea398061b18953f603bdb0 186 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 185 40.626 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 DDU33_08740 064036a9bfea398061b18953f603bdb0 186 Gene3D G3DSA:1.20.1380.10 71 184 1.2E-38 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 DDU33_08740 064036a9bfea398061b18953f603bdb0 186 SUPERFAMILY SSF82808 70 184 3.4E-40 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 DDU33_08740 064036a9bfea398061b18953f603bdb0 186 SUPERFAMILY SSF47598 1 35 2.0E-13 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDU33_08740 064036a9bfea398061b18953f603bdb0 186 PIRSF PIRSF019401 1 186 3.1E-51 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 DDU33_08740 064036a9bfea398061b18953f603bdb0 186 Pfam PF17206 SeqA protein N-terminal domain 1 36 6.9E-24 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal DDU33_08740 064036a9bfea398061b18953f603bdb0 186 Gene3D G3DSA:1.10.1220.10 1 41 3.0E-23 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDU33_01995 a2953a21527ca07565043411dcf919d9 156 Gene3D G3DSA:1.10.10.10 6 61 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_01995 a2953a21527ca07565043411dcf919d9 156 Gene3D G3DSA:3.30.70.920 62 144 2.4E-32 T 14-10-2018 DDU33_01995 a2953a21527ca07565043411dcf919d9 156 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 7.7E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDU33_01995 a2953a21527ca07565043411dcf919d9 156 Pfam PF01037 Lrp/AsnC ligand binding domain 80 147 2.1E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DDU33_01995 a2953a21527ca07565043411dcf919d9 156 SMART SM00344 10 117 1.4E-41 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DDU33_01995 a2953a21527ca07565043411dcf919d9 156 SUPERFAMILY SSF46785 9 70 3.16E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_01995 a2953a21527ca07565043411dcf919d9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 9.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDU33_01995 a2953a21527ca07565043411dcf919d9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 9.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDU33_01995 a2953a21527ca07565043411dcf919d9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 9.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DDU33_01995 a2953a21527ca07565043411dcf919d9 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DDU33_01995 a2953a21527ca07565043411dcf919d9 156 SUPERFAMILY SSF54909 71 154 2.01E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 Gene3D G3DSA:3.10.290.10 97 193 3.5E-80 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 SMART SM00363 98 162 3.4E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 Pfam PF01479 S4 domain 99 145 5.8E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.6 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.9E-86 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 Gene3D G3DSA:1.10.1050.10 6 208 3.5E-80 T 14-10-2018 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 SMART SM01390 3 97 3.2E-47 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 7.2E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DDU33_02095 2d01c8e7357c3e3e1de4d15d9c6277cd 208 SUPERFAMILY SSF55174 3 208 3.79E-71 T 14-10-2018 DDU33_02440 cc89c7802a6542064da5d8db150ea7f8 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.512 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DDU33_02440 cc89c7802a6542064da5d8db150ea7f8 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.3E-84 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DDU33_02440 cc89c7802a6542064da5d8db150ea7f8 155 SUPERFAMILY SSF75217 1 153 1.62E-51 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DDU33_02440 cc89c7802a6542064da5d8db150ea7f8 155 Gene3D G3DSA:3.40.1280.10 1 155 1.2E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDU33_02440 cc89c7802a6542064da5d8db150ea7f8 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 2.6E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DDU33_02440 cc89c7802a6542064da5d8db150ea7f8 155 PIRSF PIRSF004505 1 154 1.7E-42 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DDU33_09670 25c6ec7dd9095c069652fa2b17884419 164 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 1 158 24.268 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DDU33_09670 25c6ec7dd9095c069652fa2b17884419 164 Gene3D G3DSA:3.30.160.150 16 161 4.2E-44 T 14-10-2018 DDU33_09670 25c6ec7dd9095c069652fa2b17884419 164 Pfam PF04390 Lipopolysaccharide-assembly 36 152 4.2E-9 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DDU33_07390 ed0dd2cff067e284546750eb8c485383 381 Gene3D G3DSA:3.20.20.140 56 343 1.2E-125 T 14-10-2018 DDU33_07390 ed0dd2cff067e284546750eb8c485383 381 PIRSF PIRSF038994 1 381 8.4E-111 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DDU33_07390 ed0dd2cff067e284546750eb8c485383 381 Gene3D G3DSA:2.30.40.10 7 375 1.2E-125 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DDU33_07390 ed0dd2cff067e284546750eb8c485383 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 376 1.9E-156 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DDU33_07390 ed0dd2cff067e284546750eb8c485383 381 SUPERFAMILY SSF51556 55 349 6.24E-93 T 14-10-2018 IPR032466 Metal-dependent hydrolase DDU33_07390 ed0dd2cff067e284546750eb8c485383 381 Pfam PF01979 Amidohydrolase family 52 377 2.3E-40 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DDU33_07390 ed0dd2cff067e284546750eb8c485383 381 SUPERFAMILY SSF51338 3 54 6.62E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 SUPERFAMILY SSF53383 1 398 2.48E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 Pfam PF00155 Aminotransferase class I and II 30 394 6.9E-84 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 Gene3D G3DSA:3.40.640.10 62 302 4.7E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 5.7E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 5.7E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 5.7E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 5.7E-36 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DDU33_08385 89b102b5d5c4feaef2dc9bb2a56eaa80 398 Gene3D G3DSA:3.90.1150.10 7 394 4.7E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_05935 12f8a071d67071799bee674e9db54370 258 SUPERFAMILY SSF51569 6 245 3.45E-80 T 14-10-2018 DDU33_05935 12f8a071d67071799bee674e9db54370 258 PIRSF PIRSF001357 4 254 5.8E-75 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDU33_05935 12f8a071d67071799bee674e9db54370 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 226 6.0E-74 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDU33_05935 12f8a071d67071799bee674e9db54370 258 Gene3D G3DSA:3.20.20.70 1 258 1.8E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_05935 12f8a071d67071799bee674e9db54370 258 Pfam PF01791 DeoC/LacD family aldolase 11 241 5.4E-43 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDU33_05935 12f8a071d67071799bee674e9db54370 258 SMART SM01133 9 245 8.0E-77 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DDU33_05935 12f8a071d67071799bee674e9db54370 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 51.594 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 420 242.221 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 SUPERFAMILY SSF68912 1 47 1.96E-9 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 Pfam PF07497 Rho termination factor, RNA-binding domain 53 126 1.0E-31 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 Gene3D G3DSA:1.10.720.10 1 48 5.9E-22 T 14-10-2018 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 SMART SM00959 5 48 7.2E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 SMART SM00357 53 119 4.3E-23 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 SMART SM00382 171 356 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 SUPERFAMILY SSF52540 91 372 6.21E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 364 5.1E-23 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 48 7.5E-16 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 Gene3D G3DSA:2.40.50.140 49 118 1.2E-34 T 14-10-2018 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 Gene3D G3DSA:3.40.50.300 131 418 8.1E-130 T 14-10-2018 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 418 2.2E-217 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DDU33_10445 7e9c18258444d7660d0184dbaf62d533 420 SUPERFAMILY SSF50249 49 126 2.96E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_01365 df4966613e25cb136dbacc6f7d5e399c 244 SUPERFAMILY SSF52540 26 239 9.67E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01365 df4966613e25cb136dbacc6f7d5e399c 244 Gene3D G3DSA:3.40.50.300 2 243 6.6E-43 T 14-10-2018 DDU33_01365 df4966613e25cb136dbacc6f7d5e399c 244 Pfam PF00005 ABC transporter 45 176 1.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_01365 df4966613e25cb136dbacc6f7d5e399c 244 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_01365 df4966613e25cb136dbacc6f7d5e399c 244 SMART SM00382 54 241 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 1.4E-135 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 Gene3D G3DSA:1.20.1050.90 120 297 1.7E-79 T 14-10-2018 DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 Gene3D G3DSA:3.40.50.300 8 331 1.7E-79 T 14-10-2018 DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 341 4.6E-43 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 93.125 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DDU33_04790 afca518d5fc33162bbd79255dc1d60bd 361 SUPERFAMILY SSF52540 1 336 7.53E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 SUPERFAMILY SSF51206 22 161 7.46E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 Gene3D G3DSA:2.60.120.10 42 163 1.5E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 SMART SM00100 29 150 2.2E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 ProSitePatterns PS00042 Crp-type HTH domain signature. 194 217 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 SMART SM00419 186 234 4.4E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 SUPERFAMILY SSF46785 164 244 3.28E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 Pfam PF13545 Crp-like helix-turn-helix domain 167 240 4.5E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 Pfam PF00027 Cyclic nucleotide-binding domain 51 131 4.7E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 Gene3D G3DSA:1.10.10.10 164 247 8.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 208 223 8.1E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_09170 25a5beb2465b3f97a56ca64a2d581eb9 259 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 208 8.1E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DDU33_07200 7f7de3562d390aa57e7aa31312262472 156 SUPERFAMILY SSF52833 1 155 4.28E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_07200 7f7de3562d390aa57e7aa31312262472 156 Gene3D G3DSA:3.40.30.10 3 154 1.7E-44 T 14-10-2018 DDU33_07200 7f7de3562d390aa57e7aa31312262472 156 Pfam PF00578 AhpC/TSA family 7 134 3.6E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DDU33_10630 6c0855df60bfa4385d6e9cc0216ea9cf 282 SUPERFAMILY SSF103481 39 137 1.96E-11 T 14-10-2018 DDU33_10630 6c0855df60bfa4385d6e9cc0216ea9cf 282 Pfam PF00892 EamA-like transporter family 149 278 8.6E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_10630 6c0855df60bfa4385d6e9cc0216ea9cf 282 Pfam PF00892 EamA-like transporter family 13 136 3.9E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_10630 6c0855df60bfa4385d6e9cc0216ea9cf 282 SUPERFAMILY SSF103481 182 281 9.42E-17 T 14-10-2018 DDU33_07095 2ae59d162811aebae69bcd03de3936ef 610 Gene3D G3DSA:3.10.20.310 53 132 5.2E-13 T 14-10-2018 DDU33_07095 2ae59d162811aebae69bcd03de3936ef 610 Gene3D G3DSA:3.10.20.310 222 296 2.1E-16 T 14-10-2018 DDU33_07095 2ae59d162811aebae69bcd03de3936ef 610 Pfam PF17243 POTRA domain TamA domain 1 57 131 8.4E-15 T 14-10-2018 IPR035243 TamA, POTRA domain 1 DDU33_07095 2ae59d162811aebae69bcd03de3936ef 610 Pfam PF01103 Surface antigen 325 608 3.4E-37 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DDU33_07095 2ae59d162811aebae69bcd03de3936ef 610 Gene3D G3DSA:3.10.20.310 136 221 2.3E-29 T 14-10-2018 DDU33_07095 2ae59d162811aebae69bcd03de3936ef 610 Gene3D G3DSA:2.40.160.50 297 610 2.7E-104 T 14-10-2018 DDU33_07095 2ae59d162811aebae69bcd03de3936ef 610 Pfam PF07244 Surface antigen variable number repeat 222 291 5.6E-7 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Gene3D G3DSA:1.10.287.970 1 89 6.4E-27 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Gene3D G3DSA:3.30.565.10 181 338 6.3E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 SMART SM00448 353 469 2.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Gene3D G3DSA:1.20.120.160 492 614 3.0E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Pfam PF01627 Hpt domain 520 601 1.4E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 SUPERFAMILY SSF47226 494 611 4.32E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 278 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 292 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 SUPERFAMILY SSF52172 352 473 1.07E-26 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 SUPERFAMILY SSF47384 103 180 3.14E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 227 338 1.6E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 PIRSF PIRSF003182 1 111 4.5E-29 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 PIRSF PIRSF003182 106 614 6.5E-190 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 SMART SM00387 226 339 4.4E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 SMART SM00388 114 179 6.3E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Pfam PF00072 Response regulator receiver domain 355 467 5.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Gene3D G3DSA:3.40.50.2300 339 473 3.6E-28 T 14-10-2018 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Gene3D G3DSA:1.10.287.130 104 180 7.9E-19 T 14-10-2018 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 Pfam PF00512 His Kinase A (phospho-acceptor) domain 115 178 4.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_09445 cdb576feb62504a39809470cdef5c91c 614 SUPERFAMILY SSF55874 168 335 3.41E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Pfam PF00176 SNF2 family N-terminal domain 172 372 3.5E-14 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Gene3D G3DSA:2.30.30.140 1 52 9.5E-23 T 14-10-2018 DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Gene3D G3DSA:3.40.50.10810 148 437 1.8E-95 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Pfam PF00271 Helicase conserved C-terminal domain 493 603 2.5E-14 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 SUPERFAMILY SSF52540 277 644 2.23E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Gene3D G3DSA:3.40.50.300 438 635 8.7E-41 T 14-10-2018 DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Gene3D G3DSA:2.30.30.930 54 112 1.3E-20 T 14-10-2018 DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 965 2.9E-150 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 SUPERFAMILY SSF52540 137 380 1.22E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 SMART SM00487 148 347 2.7E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 28.389 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 SMART SM00490 519 603 9.3E-11 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_10030 c3a19561a0c735800bd91c2050f9f75c 969 Gene3D G3DSA:3.30.360.80 714 787 1.7E-29 T 14-10-2018 DDU33_01525 08b199b1f397da167968c308da098089 622 Gene3D G3DSA:1.10.601.10 117 457 6.8E-127 T 14-10-2018 DDU33_01525 08b199b1f397da167968c308da098089 622 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 384 609 7.4E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 384 620 3.1E-121 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DDU33_01525 08b199b1f397da167968c308da098089 622 Pfam PF04545 Sigma-70, region 4 556 609 3.0E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 Pfam PF03979 Sigma-70 factor, region 1.1 10 86 4.9E-23 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 581 607 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 Gene3D G3DSA:1.10.10.10 538 622 5.6E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_01525 08b199b1f397da167968c308da098089 622 Pfam PF04539 Sigma-70 region 3 467 542 2.8E-29 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 SUPERFAMILY SSF88946 119 455 1.14E-90 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 Pfam PF04542 Sigma-70 region 2 388 457 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 Gene3D G3DSA:1.10.10.10 461 537 3.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_01525 08b199b1f397da167968c308da098089 622 PRINTS PR00046 Major sigma-70 factor signature 560 572 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 PRINTS PR00046 Major sigma-70 factor signature 596 607 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 PRINTS PR00046 Major sigma-70 factor signature 581 596 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 PRINTS PR00046 Major sigma-70 factor signature 412 425 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 PRINTS PR00046 Major sigma-70 factor signature 436 444 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 SUPERFAMILY SSF88659 518 620 1.68E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DDU33_01525 08b199b1f397da167968c308da098089 622 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 412 425 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_01525 08b199b1f397da167968c308da098089 622 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 10 621 44.111 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DDU33_01525 08b199b1f397da167968c308da098089 622 Pfam PF00140 Sigma-70 factor, region 1.2 102 132 1.1E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_01525 08b199b1f397da167968c308da098089 622 SUPERFAMILY SSF88659 461 535 7.29E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DDU33_01525 08b199b1f397da167968c308da098089 622 Pfam PF04546 Sigma-70, non-essential region 143 357 2.1E-58 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_01525 08b199b1f397da167968c308da098089 622 Gene3D G3DSA:1.10.220.120 7 70 7.9E-23 T 14-10-2018 DDU33_05260 d06144d334d4d960c2c8617620c31316 298 SUPERFAMILY SSF46785 2 86 4.79E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_05260 d06144d334d4d960c2c8617620c31316 298 Pfam PF03466 LysR substrate binding domain 88 283 1.7E-43 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_05260 d06144d334d4d960c2c8617620c31316 298 Gene3D G3DSA:1.10.10.10 1 85 1.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_05260 d06144d334d4d960c2c8617620c31316 298 SUPERFAMILY SSF53850 88 291 1.18E-37 T 14-10-2018 DDU33_05260 d06144d334d4d960c2c8617620c31316 298 Gene3D G3DSA:3.40.190.10 91 278 2.5E-61 T 14-10-2018 DDU33_05260 d06144d334d4d960c2c8617620c31316 298 Gene3D G3DSA:3.40.190.10 164 264 2.5E-61 T 14-10-2018 DDU33_05260 d06144d334d4d960c2c8617620c31316 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_05260 d06144d334d4d960c2c8617620c31316 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_05260 d06144d334d4d960c2c8617620c31316 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_05260 d06144d334d4d960c2c8617620c31316 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 SUPERFAMILY SSF51735 199 445 2.04E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 SMART SM00839 201 444 1.6E-84 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 Gene3D G3DSA:1.10.285.10 6 381 6.6E-172 T 14-10-2018 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 444 1.7E-84 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 2.5E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 370 381 2.5E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 2.5E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 2.5E-32 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 Gene3D G3DSA:3.40.50.720 206 371 6.6E-172 T 14-10-2018 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 PIRSF PIRSF000185 19 446 1.1E-117 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 Gene3D G3DSA:1.10.285.10 382 446 6.1E-9 T 14-10-2018 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 Gene3D G3DSA:3.40.50.10860 52 187 6.6E-172 T 14-10-2018 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 4.2E-52 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DDU33_07070 421ffa0e5b8533f164dd512f3671a931 446 SUPERFAMILY SSF53223 4 193 6.08E-75 T 14-10-2018 DDU33_01650 ac399c979b3c54128e02f81145ba0d7a 215 Gene3D G3DSA:2.40.128.20 18 200 1.7E-7 T 14-10-2018 IPR012674 Calycin DDU33_01650 ac399c979b3c54128e02f81145ba0d7a 215 SUPERFAMILY SSF50814 23 200 1.76E-25 T 14-10-2018 IPR012674 Calycin DDU33_01650 ac399c979b3c54128e02f81145ba0d7a 215 Pfam PF08768 Domain of unknown function (DUF1794) 24 199 2.2E-20 T 14-10-2018 IPR014878 Domain of unknown function DUF1794 DDU33_01650 ac399c979b3c54128e02f81145ba0d7a 215 PIRSF PIRSF036226 6 203 1.2E-59 T 14-10-2018 IPR014602 Uncharacterised conserved protein UCP036226 DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 Pfam PF04851 Type III restriction enzyme, res subunit 129 306 2.0E-14 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 SUPERFAMILY SSF53335 833 1059 5.54E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 Gene3D G3DSA:3.40.50.300 119 325 8.2E-17 T 14-10-2018 DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 SUPERFAMILY SSF52540 108 307 1.17E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 SMART SM00974 25 112 2.6E-5 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 Gene3D G3DSA:3.40.50.300 351 560 3.0E-8 T 14-10-2018 DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 SMART SM00487 127 340 2.1E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 SUPERFAMILY SSF52540 268 525 1.56E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08080 0b2f448001a3d31eaf0161ca28adf160 1082 Gene3D G3DSA:3.40.50.150 938 1076 3.9E-9 T 14-10-2018 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Gene3D G3DSA:1.10.150.20 437 496 8.3E-23 T 14-10-2018 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Pfam PF08529 NusA N-terminal domain 4 123 3.2E-34 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Gene3D G3DSA:1.10.150.20 359 427 1.0E-22 T 14-10-2018 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Pfam PF14520 Helix-hairpin-helix domain 438 492 5.7E-9 T 14-10-2018 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Pfam PF13184 NusA-like KH domain 235 303 8.9E-29 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SMART SM00322 235 298 10.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SMART SM00322 306 384 0.13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SMART SM00316 133 205 3.0E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Gene3D G3DSA:3.30.300.20 204 282 3.5E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SUPERFAMILY SSF50249 133 204 4.14E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 416 27.956 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SUPERFAMILY SSF69705 1 125 9.02E-39 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Gene3D G3DSA:3.30.300.20 283 350 1.2E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 446 495 2.8E-17 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 370 419 1.5E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SUPERFAMILY SSF54814 207 283 4.77E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SUPERFAMILY SSF47794 359 420 2.98E-13 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SUPERFAMILY SSF54814 284 348 1.48E-14 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 SUPERFAMILY SSF47794 437 497 3.92E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Gene3D G3DSA:2.40.50.140 135 203 1.4E-15 T 14-10-2018 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 Gene3D G3DSA:3.30.1480.10 1 129 1.9E-38 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DDU33_08275 9cbf40723ff222c5254a0962aad473ab 498 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 347 2.5E-123 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 37 6.2E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 Pfam PF12838 4Fe-4S dicluster domain 57 112 1.3E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 Pfam PF12800 4Fe-4S binding domain 180 193 0.53 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 Pfam PF12800 4Fe-4S binding domain 134 152 0.039 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 Gene3D G3DSA:3.30.70.20 52 129 8.1E-11 T 14-10-2018 DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 58 69 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 SUPERFAMILY SSF54862 56 201 1.15E-25 T 14-10-2018 DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 5 215 9.4E-80 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein DDU33_01005 7568925ccff5f4c2c2ac6396b92a5889 301 Gene3D G3DSA:3.30.70.20 133 214 3.7E-9 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 SMART SM00382 350 494 7.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 1.4E-18 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 TIGRFAM TIGR00763 lon: endopeptidase La 12 772 8.2E-298 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 SUPERFAMILY SSF88697 10 200 2.36E-42 T 14-10-2018 IPR015947 PUA-like superfamily DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Gene3D G3DSA:1.10.8.60 493 586 1.9E-34 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 SUPERFAMILY SSF52540 316 590 4.99E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Gene3D G3DSA:3.30.230.10 587 774 7.4E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Gene3D G3DSA:2.30.130.40 1 118 6.0E-35 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 9.1E-56 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 9.1E-56 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 9.1E-56 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 9.1E-56 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 9.1E-56 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Gene3D G3DSA:3.40.50.300 315 492 3.3E-61 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Hamap MF_01973 Lon protease [lon]. 11 774 69.845 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Gene3D G3DSA:1.20.58.1480 122 246 2.8E-34 T 14-10-2018 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 PIRSF PIRSF001174 1 777 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.3E-42 T 14-10-2018 IPR003111 Lon, substrate-binding domain DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 774 1.7E-96 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 SMART SM00464 10 203 6.8E-63 T 14-10-2018 IPR003111 Lon, substrate-binding domain DDU33_07015 7f130ebc28f9f3080e87a82e94be8eab 801 SUPERFAMILY SSF54211 597 772 4.17E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 Gene3D G3DSA:3.30.1360.70 1 106 6.7E-35 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 SUPERFAMILY SSF47323 455 575 1.7E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 SMART SM01016 5 87 7.6E-31 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 Pfam PF00750 tRNA synthetases class I (R) 101 446 4.2E-165 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 575 1.2E-205 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.1E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.1E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.1E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.1E-26 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 Gene3D G3DSA:1.10.730.10 454 575 8.5E-36 T 14-10-2018 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 3.0E-22 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 575 27.765 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 SMART SM00836 460 575 1.9E-40 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 SUPERFAMILY SSF52374 109 453 1.27E-92 T 14-10-2018 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 Gene3D G3DSA:3.40.50.620 107 453 7.4E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 SUPERFAMILY SSF55190 2 96 9.29E-25 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DDU33_05120 975d1494e09af62aec1ccdf0077fbdff 575 Pfam PF05746 DALR anticodon binding domain 460 575 5.1E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 499 1.1E-171 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 499 34.969 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 Gene3D G3DSA:3.90.190.20 351 500 2.1E-60 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 SUPERFAMILY SSF63418 15 108 2.75E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 SUPERFAMILY SSF53623 110 341 9.42E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 Gene3D G3DSA:3.40.1390.10 4 109 3.7E-27 T 14-10-2018 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 Pfam PF08245 Mur ligase middle domain 119 321 3.8E-50 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 Gene3D G3DSA:3.40.1190.10 110 346 8.5E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 SUPERFAMILY SSF53244 343 499 5.49E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 Pfam PF01225 Mur ligase family, catalytic domain 23 107 1.1E-15 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDU33_01295 7d33c612bf77ec68d8cd056a4e3ad5cf 500 Pfam PF02875 Mur ligase family, glutamate ligase domain 343 430 1.9E-22 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 SUPERFAMILY SSF50494 40 268 4.14E-66 T 14-10-2018 IPR009003 Peptidase S1, PA clan DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 Pfam PF13180 PDZ domain 294 367 4.3E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 SUPERFAMILY SSF50156 393 459 5.13E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 SMART SM00228 276 358 1.5E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 SMART SM00228 383 455 8.2E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 SUPERFAMILY SSF50156 234 359 1.14E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 461 3.4E-158 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 PRINTS PR00834 HtrA/DegQ protease family signature 110 122 1.4E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 PRINTS PR00834 HtrA/DegQ protease family signature 316 328 1.4E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 PRINTS PR00834 HtrA/DegQ protease family signature 131 151 1.4E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 PRINTS PR00834 HtrA/DegQ protease family signature 172 196 1.4E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.4E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 PRINTS PR00834 HtrA/DegQ protease family signature 230 247 1.4E-59 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 Gene3D G3DSA:2.30.42.10 274 373 1.2E-29 T 14-10-2018 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 393 451 6.6E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 Pfam PF13365 Trypsin-like peptidase domain 100 237 3.4E-30 T 14-10-2018 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 Gene3D G3DSA:2.30.42.10 374 463 5.7E-24 T 14-10-2018 DDU33_00480 50ff4426c590dc147e24fbd700ce7ffd 463 Gene3D G3DSA:2.40.10.120 39 270 4.7E-86 T 14-10-2018 DDU33_06630 4c0c08c119ef908216816df9853f6aaa 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_06630 4c0c08c119ef908216816df9853f6aaa 292 Gene3D G3DSA:3.40.190.10 91 289 8.8E-30 T 14-10-2018 DDU33_06630 4c0c08c119ef908216816df9853f6aaa 292 Pfam PF03466 LysR substrate binding domain 87 291 3.6E-38 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_06630 4c0c08c119ef908216816df9853f6aaa 292 SUPERFAMILY SSF46785 1 111 7.69E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_06630 4c0c08c119ef908216816df9853f6aaa 292 Gene3D G3DSA:1.10.10.10 1 90 2.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06630 4c0c08c119ef908216816df9853f6aaa 292 SUPERFAMILY SSF53850 88 291 1.05E-31 T 14-10-2018 DDU33_06630 4c0c08c119ef908216816df9853f6aaa 292 Gene3D G3DSA:3.40.190.10 165 267 8.8E-30 T 14-10-2018 DDU33_07600 51233b2e8e05b99963ed1f96e938c7c1 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_07600 51233b2e8e05b99963ed1f96e938c7c1 230 SUPERFAMILY SSF51366 1 228 1.12E-79 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_07600 51233b2e8e05b99963ed1f96e938c7c1 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 230 40.128 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_07600 51233b2e8e05b99963ed1f96e938c7c1 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 224 8.9E-61 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_07600 51233b2e8e05b99963ed1f96e938c7c1 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 222 4.8E-51 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_07600 51233b2e8e05b99963ed1f96e938c7c1 230 Gene3D G3DSA:3.20.20.70 1 229 4.6E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_07600 51233b2e8e05b99963ed1f96e938c7c1 230 SMART SM00934 4 225 4.7E-93 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 SUPERFAMILY SSF55021 425 507 6.23E-22 T 14-10-2018 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 Gene3D G3DSA:3.40.1020.10 333 507 4.7E-65 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 SUPERFAMILY SSF53686 6 360 4.71E-106 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 SUPERFAMILY SSF55021 331 417 3.51E-26 T 14-10-2018 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 Gene3D G3DSA:3.40.50.1100 56 152 7.8E-136 T 14-10-2018 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 Gene3D G3DSA:3.40.50.1100 20 322 7.8E-136 T 14-10-2018 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 506 9.4E-253 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 2.0E-83 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 506 1.9E-23 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 413 2.8E-29 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DDU33_04370 4e61305c6d877190962c4d0dfd426659 507 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DDU33_09255 2353d726cf7d7d9a8148a92853dbf09b 461 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 29 91 5.9E-8 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal DDU33_09255 2353d726cf7d7d9a8148a92853dbf09b 461 SUPERFAMILY SSF160246 23 85 1.12E-6 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily DDU33_09255 2353d726cf7d7d9a8148a92853dbf09b 461 Pfam PF00437 Type II/IV secretion system protein 130 390 4.8E-80 T 14-10-2018 IPR001482 Type II/IV secretion system protein DDU33_09255 2353d726cf7d7d9a8148a92853dbf09b 461 SUPERFAMILY SSF52540 114 457 2.15E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09255 2353d726cf7d7d9a8148a92853dbf09b 461 Gene3D G3DSA:3.30.450.90 87 222 1.5E-40 T 14-10-2018 DDU33_09255 2353d726cf7d7d9a8148a92853dbf09b 461 Gene3D G3DSA:3.40.50.300 225 459 5.6E-86 T 14-10-2018 DDU33_02005 a0be23a29b81dbfa1d108e6e3edbdd96 209 Pfam PF02223 Thymidylate kinase 8 197 3.7E-58 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DDU33_02005 a0be23a29b81dbfa1d108e6e3edbdd96 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 9.1E-67 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DDU33_02005 a0be23a29b81dbfa1d108e6e3edbdd96 209 Gene3D G3DSA:3.40.50.300 1 208 1.9E-65 T 14-10-2018 DDU33_02005 a0be23a29b81dbfa1d108e6e3edbdd96 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 28.122 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DDU33_02005 a0be23a29b81dbfa1d108e6e3edbdd96 209 SUPERFAMILY SSF52540 1 207 3.38E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02005 a0be23a29b81dbfa1d108e6e3edbdd96 209 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DDU33_03080 0959cde3295423189361cc2e4a15e330 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 9.0E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03080 0959cde3295423189361cc2e4a15e330 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 9.0E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03080 0959cde3295423189361cc2e4a15e330 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.0E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03080 0959cde3295423189361cc2e4a15e330 104 SMART SM00418 8 82 2.1E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03080 0959cde3295423189361cc2e4a15e330 104 Pfam PF12840 Helix-turn-helix domain 9 69 3.4E-13 T 14-10-2018 DDU33_03080 0959cde3295423189361cc2e4a15e330 104 Gene3D G3DSA:1.10.10.10 1 93 2.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03080 0959cde3295423189361cc2e4a15e330 104 SUPERFAMILY SSF46785 2 92 1.46E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_00610 597dee1d4a5ac0df71ab7876b2fe2adb 119 Pfam PF06993 Protein of unknown function (DUF1304) 11 116 3.7E-36 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 DDU33_09455 75869abab1670b21d4602050edb83194 179 SUPERFAMILY SSF160443 90 144 2.35E-10 T 14-10-2018 IPR036063 Smr domain superfamily DDU33_09455 75869abab1670b21d4602050edb83194 179 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 168 38.381 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 DDU33_09455 75869abab1670b21d4602050edb83194 179 SMART SM00463 89 167 7.0E-17 T 14-10-2018 IPR002625 Smr domain DDU33_09455 75869abab1670b21d4602050edb83194 179 Pfam PF01713 Smr domain 92 165 1.7E-15 T 14-10-2018 IPR002625 Smr domain DDU33_09455 75869abab1670b21d4602050edb83194 179 Gene3D G3DSA:3.30.1370.110 42 171 4.5E-24 T 14-10-2018 DDU33_00675 233fe9519144755b7a569ab349a228fd 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDU33_00675 233fe9519144755b7a569ab349a228fd 264 PIRSF PIRSF005902 1 264 5.4E-63 T 14-10-2018 IPR001130 TatD family GO:0016788 DDU33_00675 233fe9519144755b7a569ab349a228fd 264 Gene3D G3DSA:3.20.20.140 1 263 1.1E-70 T 14-10-2018 DDU33_00675 233fe9519144755b7a569ab349a228fd 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 198 214 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DDU33_00675 233fe9519144755b7a569ab349a228fd 264 Pfam PF01026 TatD related DNase 4 261 1.6E-58 T 14-10-2018 IPR001130 TatD family GO:0016788 DDU33_00675 233fe9519144755b7a569ab349a228fd 264 SUPERFAMILY SSF51556 1 262 1.33E-65 T 14-10-2018 IPR032466 Metal-dependent hydrolase DDU33_06400 cc905ef737401b793386f724cfc862ad 210 SUPERFAMILY SSF46785 5 71 8.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_06400 cc905ef737401b793386f724cfc862ad 210 SUPERFAMILY SSF51306 84 205 1.7E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DDU33_06400 cc905ef737401b793386f724cfc862ad 210 Pfam PF01726 LexA DNA binding domain 4 67 7.9E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DDU33_06400 cc905ef737401b793386f724cfc862ad 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 158 170 1.9E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DDU33_06400 cc905ef737401b793386f724cfc862ad 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 130 141 1.9E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DDU33_06400 cc905ef737401b793386f724cfc862ad 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 119 129 1.9E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DDU33_06400 cc905ef737401b793386f724cfc862ad 210 Gene3D G3DSA:2.10.109.10 88 210 2.9E-41 T 14-10-2018 DDU33_06400 cc905ef737401b793386f724cfc862ad 210 Hamap MF_00015 LexA repressor [lexA]. 5 207 32.35 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DDU33_06400 cc905ef737401b793386f724cfc862ad 210 Pfam PF00717 Peptidase S24-like 122 184 2.6E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DDU33_06400 cc905ef737401b793386f724cfc862ad 210 Gene3D G3DSA:1.10.10.10 3 71 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06400 cc905ef737401b793386f724cfc862ad 210 TIGRFAM TIGR00498 lexA: repressor LexA 4 207 1.8E-76 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DDU33_00460 d6fb217e6097a0eab90e797099ccd944 173 Pfam PF02470 MlaD protein 40 117 8.6E-22 T 14-10-2018 IPR003399 Mce/MlaD DDU33_00460 d6fb217e6097a0eab90e797099ccd944 173 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.2E-56 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 DDU33_09815 1f17a3087fbdbd8a047bbfe56422ea23 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.692 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 DDU33_09815 1f17a3087fbdbd8a047bbfe56422ea23 106 Pfam PF01906 Putative heavy-metal-binding 1 105 7.9E-40 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 DDU33_09815 1f17a3087fbdbd8a047bbfe56422ea23 106 SUPERFAMILY SSF117782 1 105 1.57E-37 T 14-10-2018 IPR035439 UPF0145 domain superfamily DDU33_09815 1f17a3087fbdbd8a047bbfe56422ea23 106 Gene3D G3DSA:3.30.110.70 2 106 8.0E-41 T 14-10-2018 DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 160 27.485 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 Gene3D G3DSA:3.30.1330.60 36 160 5.7E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 PRINTS PR01021 OMPA domain signature 107 123 8.8E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 PRINTS PR01021 OMPA domain signature 63 85 8.8E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 PRINTS PR01021 OMPA domain signature 92 107 8.8E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 SUPERFAMILY SSF103088 57 159 9.03E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 60 160 3.7E-38 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 DDU33_06070 f9149ebb43334a09a71ecd1f2732e790 160 Pfam PF00691 OmpA family 62 154 3.3E-19 T 14-10-2018 IPR006665 OmpA-like domain DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 SMART SM00739 130 157 6.7E-6 T 14-10-2018 IPR005824 KOW DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 SMART SM00738 9 118 2.5E-45 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 9 184 23.737 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 SUPERFAMILY SSF50104 130 183 2.16E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 Gene3D G3DSA:2.30.30.30 127 183 1.5E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 ProSitePatterns PS01014 Transcription termination factor nusG signature. 167 176 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 12 183 4.2E-68 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 Pfam PF00467 KOW motif 133 163 1.4E-9 T 14-10-2018 IPR005824 KOW DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 Gene3D G3DSA:3.30.70.940 4 126 1.1E-44 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 Pfam PF02357 Transcription termination factor nusG 10 115 6.3E-25 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 PRINTS PR00338 Transcription termination factor NUSG signature 160 176 6.1E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 PRINTS PR00338 Transcription termination factor NUSG signature 64 76 6.1E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 PRINTS PR00338 Transcription termination factor NUSG signature 142 157 6.1E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DDU33_03405 b66577ef9b173dafc0a535b251ab3726 186 SUPERFAMILY SSF82679 9 120 6.15E-38 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DDU33_05915 e0dbe42f056dd38c72c7f7c454c2d1d6 266 SUPERFAMILY SSF53448 2 227 2.67E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_05915 e0dbe42f056dd38c72c7f7c454c2d1d6 266 Pfam PF00535 Glycosyl transferase family 2 4 166 3.5E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_05915 e0dbe42f056dd38c72c7f7c454c2d1d6 266 Gene3D G3DSA:3.90.550.10 1 208 2.2E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_02500 227649830bee26a8c36ab1e071b41a59 380 SUPERFAMILY SSF48452 63 149 4.88E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02500 227649830bee26a8c36ab1e071b41a59 380 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 63 116 4.6E-7 T 14-10-2018 DDU33_02500 227649830bee26a8c36ab1e071b41a59 380 Gene3D G3DSA:1.25.40.10 37 222 1.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 Gene3D G3DSA:3.10.20.30 48 362 1.8E-154 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 PIRSF PIRSF006641 1 363 6.1E-160 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.4E-176 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 Gene3D G3DSA:3.40.50.300 4 278 1.8E-154 T 14-10-2018 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.181 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.0E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 2.8E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.1E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 Gene3D G3DSA:1.10.150.300 120 200 1.8E-154 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 SUPERFAMILY SSF52540 3 301 3.52E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01060 fcac15b033f5c47a39b5eee7102ec75a 363 SUPERFAMILY SSF81271 279 360 2.4E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 332 2.6E-121 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 333 37.775 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 Pfam PF00591 Glycosyl transferase family, a/b domain 75 323 3.3E-94 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 SUPERFAMILY SSF47648 5 69 1.01E-16 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 Gene3D G3DSA:1.20.970.10 12 185 5.6E-119 T 14-10-2018 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 Gene3D G3DSA:3.40.1030.10 69 323 5.6E-119 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 SUPERFAMILY SSF52418 72 332 1.83E-90 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDU33_05595 e4cc0f3ef0629bde0cacc17fb57c8d71 334 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 65 1.8E-15 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDU33_01620 1fe311c1e5176499df4c03564acd2951 380 SUPERFAMILY SSF53383 23 380 6.28E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_01620 1fe311c1e5176499df4c03564acd2951 380 Gene3D G3DSA:3.90.1150.10 39 372 1.4E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_01620 1fe311c1e5176499df4c03564acd2951 380 Pfam PF00155 Aminotransferase class I and II 37 378 1.1E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDU33_01620 1fe311c1e5176499df4c03564acd2951 380 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 235 244 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DDU33_01620 1fe311c1e5176499df4c03564acd2951 380 Gene3D G3DSA:3.40.640.10 53 286 1.4E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_04485 f38779c10ae662e78982288a049da821 339 SMART SM00354 8 81 2.4E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_04485 f38779c10ae662e78982288a049da821 339 Gene3D G3DSA:3.40.50.2300 162 339 7.4E-28 T 14-10-2018 DDU33_04485 f38779c10ae662e78982288a049da821 339 Pfam PF13407 Periplasmic binding protein domain 72 287 1.7E-10 T 14-10-2018 IPR025997 Periplasmic binding protein DDU33_04485 f38779c10ae662e78982288a049da821 339 SUPERFAMILY SSF47413 10 65 3.09E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_04485 f38779c10ae662e78982288a049da821 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 58 1.4E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_04485 f38779c10ae662e78982288a049da821 339 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 10 338 3.4E-127 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 DDU33_04485 f38779c10ae662e78982288a049da821 339 Gene3D G3DSA:3.40.50.2300 70 158 3.7E-20 T 14-10-2018 DDU33_04485 f38779c10ae662e78982288a049da821 339 SUPERFAMILY SSF53822 68 326 4.32E-44 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_04485 f38779c10ae662e78982288a049da821 339 Gene3D G3DSA:1.10.260.40 9 69 2.9E-20 T 14-10-2018 DDU33_04485 f38779c10ae662e78982288a049da821 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 DDU33_09545 58633f7e4634b3913d4956724cb1f52e 175 Gene3D G3DSA:2.40.50.140 1 120 6.4E-47 T 14-10-2018 DDU33_09545 58633f7e4634b3913d4956724cb1f52e 175 PIRSF PIRSF002070 1 163 3.8E-37 T 14-10-2018 DDU33_09545 58633f7e4634b3913d4956724cb1f52e 175 Pfam PF00436 Single-strand binding protein family 4 108 1.8E-42 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DDU33_09545 58633f7e4634b3913d4956724cb1f52e 175 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 38.69 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DDU33_09545 58633f7e4634b3913d4956724cb1f52e 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 175 1.2E-60 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DDU33_09545 58633f7e4634b3913d4956724cb1f52e 175 SUPERFAMILY SSF50249 3 175 2.06E-60 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 PRINTS PR00173 Glutamate-aspartate symporter signature 183 208 2.9E-6 T 14-10-2018 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 PRINTS PR00173 Glutamate-aspartate symporter signature 440 460 2.9E-6 T 14-10-2018 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 PRINTS PR00173 Glutamate-aspartate symporter signature 146 166 2.9E-6 T 14-10-2018 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 SUPERFAMILY SSF116726 337 409 2.22E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 Gene3D G3DSA:3.30.70.1450 231 312 7.7E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 Pfam PF03600 Citrate transporter 30 216 2.1E-33 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 SUPERFAMILY SSF116726 246 309 7.72E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 Pfam PF02080 TrkA-C domain 246 311 4.8E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 Pfam PF02080 TrkA-C domain 339 407 5.2E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 Gene3D G3DSA:3.30.70.1450 338 411 1.5E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 573 589 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 DDU33_01590 eae98a493f2d2aece9967cb2da24b2de 625 Pfam PF03600 Citrate transporter 442 622 1.4E-20 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DDU33_06760 617b457f11f6a498d36dbb1ee18ed8a8 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 92 1.6E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDU33_06760 617b457f11f6a498d36dbb1ee18ed8a8 96 Gene3D G3DSA:3.30.2310.20 1 95 4.3E-12 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 Gene3D G3DSA:3.90.550.10 2 226 6.9E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 402 430 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 SUPERFAMILY SSF53448 5 251 1.85E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 SUPERFAMILY SSF51161 253 437 1.18E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 428 2.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 352 381 5.6E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 299 1.7E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 43.53 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 Gene3D G3DSA:2.160.10.10 227 455 1.6E-75 T 14-10-2018 DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 453 1.5E-204 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DDU33_07555 d5e96f3b682ffea61a03ddcbed8c045e 455 Pfam PF12804 MobA-like NTP transferase domain 7 128 2.4E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 14-10-2018 DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.6E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.335 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 9.7E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 7.0E-22 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 Gene3D G3DSA:3.30.1550.10 2 72 7.0E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 SMART SM00649 9 141 3.7E-80 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 SUPERFAMILY SSF54747 3 73 6.02E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 SUPERFAMILY SSF46906 68 141 5.76E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DDU33_03410 76a0eb933329b9651ef34310299b09ed 142 Gene3D G3DSA:1.10.10.250 73 141 6.3E-26 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DDU33_08370 4645cd085943b516ade30feb23db80a2 608 Pfam PF02254 TrkA-N domain 409 520 4.7E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DDU33_08370 4645cd085943b516ade30feb23db80a2 608 Pfam PF00999 Sodium/hydrogen exchanger family 15 380 7.1E-67 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DDU33_08370 4645cd085943b516ade30feb23db80a2 608 Gene3D G3DSA:1.20.1530.20 5 386 7.1E-81 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DDU33_08370 4645cd085943b516ade30feb23db80a2 608 Gene3D G3DSA:3.40.50.720 405 568 2.5E-33 T 14-10-2018 DDU33_08370 4645cd085943b516ade30feb23db80a2 608 SUPERFAMILY SSF51735 409 535 1.04E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_08370 4645cd085943b516ade30feb23db80a2 608 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 17 290 7.1E-80 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 28.709 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 SUPERFAMILY SSF47729 1 91 1.09E-27 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 5.7E-39 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-27 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 SMART SM00411 1 91 7.5E-38 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_07585 81e0f31fdbe3559218c6f8d1c3c4b903 93 Gene3D G3DSA:4.10.520.10 1 92 4.3E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DDU33_07325 8da2f0763c1fd369c4e62b875ec08990 571 Gene3D G3DSA:2.40.50.460 451 570 1.2E-8 T 14-10-2018 DDU33_07325 8da2f0763c1fd369c4e62b875ec08990 571 SUPERFAMILY SSF64182 44 463 2.62E-118 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DDU33_07325 8da2f0763c1fd369c4e62b875ec08990 571 Pfam PF01368 DHH family 70 201 3.1E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DDU33_07325 8da2f0763c1fd369c4e62b875ec08990 571 Pfam PF02272 DHHA1 domain 315 448 1.5E-28 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DDU33_07325 8da2f0763c1fd369c4e62b875ec08990 571 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 568 3.2E-164 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DDU33_07325 8da2f0763c1fd369c4e62b875ec08990 571 Gene3D G3DSA:3.10.310.30 321 450 2.7E-31 T 14-10-2018 DDU33_07325 8da2f0763c1fd369c4e62b875ec08990 571 Gene3D G3DSA:3.90.1640.30 44 319 1.4E-89 T 14-10-2018 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 TIGRFAM TIGR00586 mutt: mutator mutT protein 5 129 1.4E-54 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 SUPERFAMILY SSF55811 3 128 1.49E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 PRINTS PR00502 NUDIX hydrolase family signature 49 64 1.3E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 PRINTS PR00502 NUDIX hydrolase family signature 35 49 1.3E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 PRINTS PR01401 Mutator MutT protein signature 79 92 9.4E-12 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 PRINTS PR01401 Mutator MutT protein signature 4 25 9.4E-12 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 Pfam PF00293 NUDIX domain 9 122 2.5E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 Gene3D G3DSA:3.90.79.10 4 131 2.4E-31 T 14-10-2018 DDU33_10735 918b0f291e01b7bc68109949036e96aa 140 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDU33_02055 d7d01873e316935f143521748c6173e7 556 Gene3D G3DSA:3.40.50.300 330 556 6.9E-39 T 14-10-2018 DDU33_02055 d7d01873e316935f143521748c6173e7 556 Pfam PF00005 ABC transporter 377 509 5.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_02055 d7d01873e316935f143521748c6173e7 556 SUPERFAMILY SSF52540 354 553 6.52E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02055 d7d01873e316935f143521748c6173e7 556 Pfam PF06472 ABC transporter transmembrane region 2 3 275 6.9E-48 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_02055 d7d01873e316935f143521748c6173e7 556 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_02055 d7d01873e316935f143521748c6173e7 556 SUPERFAMILY SSF90123 22 338 9.42E-17 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_02055 d7d01873e316935f143521748c6173e7 556 SMART SM00382 385 555 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_07315 f029584501738da63ba36a8617c97038 495 Gene3D G3DSA:3.10.450.350 145 233 7.2E-8 T 14-10-2018 DDU33_07315 f029584501738da63ba36a8617c97038 495 Pfam PF01551 Peptidase family M23 368 462 3.1E-30 T 14-10-2018 IPR016047 Peptidase M23 DDU33_07315 f029584501738da63ba36a8617c97038 495 Gene3D G3DSA:3.10.450.350 234 337 3.7E-23 T 14-10-2018 DDU33_07315 f029584501738da63ba36a8617c97038 495 Gene3D G3DSA:2.70.70.10 339 468 8.0E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_07315 f029584501738da63ba36a8617c97038 495 SUPERFAMILY SSF51261 218 464 7.59E-65 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 Gene3D G3DSA:1.10.10.10 1 53 4.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 SUPERFAMILY SSF100950 72 231 2.83E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 2.5E-19 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 SUPERFAMILY SSF46785 2 57 6.71E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 Pfam PF00455 DeoR C terminal sensor domain 73 229 4.1E-42 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 SMART SM01134 71 230 1.7E-55 T 14-10-2018 DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 SMART SM00420 4 56 4.1E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 1.7E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_03465 451f94a644f3d8de78203879cf6ce0b3 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 1.7E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_10245 dfa3849a4b5982dd84ad89cde335a962 365 Hamap MF_02040 Iron-sulfur cluster carrier protein. 96 345 37.672 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein DDU33_10245 dfa3849a4b5982dd84ad89cde335a962 365 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 101 344 3.7E-103 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DDU33_10245 dfa3849a4b5982dd84ad89cde335a962 365 Gene3D G3DSA:3.40.50.300 89 343 1.7E-82 T 14-10-2018 DDU33_10245 dfa3849a4b5982dd84ad89cde335a962 365 SUPERFAMILY SSF52540 103 349 7.25E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10245 dfa3849a4b5982dd84ad89cde335a962 365 ProSitePatterns PS01215 Mrp family signature. 208 224 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 5.5E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 5.5E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 5.5E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 5.5E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 5.5E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 5.5E-50 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 6.7E-173 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 Gene3D G3DSA:3.90.226.10 1 314 3.4E-124 T 14-10-2018 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 3 147 2.4E-65 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 3 315 51.228 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_03635 cd4a7103bd30828ac48f6ad3846dae61 315 SUPERFAMILY SSF52096 3 314 1.46E-104 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 PIRSF PIRSF002162 1 177 3.4E-44 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 Gene3D G3DSA:3.90.930.12 83 177 7.0E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 Pfam PF00347 Ribosomal protein L6 90 164 7.3E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 Pfam PF00347 Ribosomal protein L6 11 82 4.3E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 9.9E-73 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.886 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 SUPERFAMILY SSF56053 83 177 1.77E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 Gene3D G3DSA:3.90.930.12 1 82 2.1E-28 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02140 6c1fc51f10a00a2a94f3c2b272d6de0e 177 SUPERFAMILY SSF56053 1 82 1.07E-22 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_01920 05e3531435f32d3d2069c321d9d18847 232 SUPERFAMILY SSF53167 4 231 3.8E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DDU33_01920 05e3531435f32d3d2069c321d9d18847 232 Gene3D G3DSA:3.40.50.1580 3 232 5.4E-67 T 14-10-2018 DDU33_01920 05e3531435f32d3d2069c321d9d18847 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 4 231 45.385 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_01920 05e3531435f32d3d2069c321d9d18847 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 4 229 1.5E-91 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_01920 05e3531435f32d3d2069c321d9d18847 232 Pfam PF01048 Phosphorylase superfamily 4 228 5.6E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 Gene3D G3DSA:1.10.3710.10 344 444 1.6E-36 T 14-10-2018 DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 SUPERFAMILY SSF52540 11 237 3.19E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 Gene3D G3DSA:1.10.8.60 164 238 2.2E-22 T 14-10-2018 DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 Gene3D G3DSA:3.40.50.300 7 162 2.0E-47 T 14-10-2018 DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 SUPERFAMILY SSF48019 250 432 9.64E-72 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 143 3.3E-16 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 Pfam PF16193 AAA C-terminal domain 187 265 1.8E-22 T 14-10-2018 IPR032423 AAA C-terminal domain DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 SMART SM00382 48 164 4.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 432 2.5E-65 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal DDU33_08870 c5e73b0eacfab719c8adfd0bae3264dd 444 Gene3D G3DSA:1.20.272.10 239 343 3.1E-42 T 14-10-2018 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 Gene3D G3DSA:3.40.50.150 1 216 4.9E-49 T 14-10-2018 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 Pfam PF00145 C-5 cytosine-specific DNA methylase 7 347 1.8E-54 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 9 346 1.5E-42 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 117 131 3.7E-11 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 7 23 3.7E-11 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 163 176 3.7E-11 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 Gene3D G3DSA:3.90.120.10 217 339 2.5E-26 T 14-10-2018 DDU33_06385 da09cb9b61a63153e41bf22b949052e6 352 SUPERFAMILY SSF53335 6 348 1.13E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_05530 63aa04c12410337f54d550727afa4649 256 SMART SM00900 144 241 6.2E-28 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDU33_05530 63aa04c12410337f54d550727afa4649 256 PIRSF PIRSF009437 1 256 5.9E-101 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 DDU33_05530 63aa04c12410337f54d550727afa4649 256 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 7 253 35.722 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 DDU33_05530 63aa04c12410337f54d550727afa4649 256 Pfam PF04205 FMN-binding domain 144 235 3.0E-13 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DDU33_05530 63aa04c12410337f54d550727afa4649 256 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 249 1.1E-92 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 Pfam PF01467 Cytidylyltransferase-like 345 469 3.1E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.6E-131 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 Gene3D G3DSA:3.40.50.620 320 474 6.0E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 Pfam PF00294 pfkB family carbohydrate kinase 11 305 5.8E-51 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 SUPERFAMILY SSF53613 11 310 1.71E-59 T 14-10-2018 IPR029056 Ribokinase-like DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 Gene3D G3DSA:3.40.1190.20 3 309 4.3E-110 T 14-10-2018 IPR029056 Ribokinase-like DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 2.1E-65 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.641 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 SUPERFAMILY SSF52374 340 471 1.19E-22 T 14-10-2018 DDU33_09485 b2ed18a70a5f0c6a583287ebefeac36c 475 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 9.7E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 SMART SM00859 5 105 1.6E-15 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 Gene3D G3DSA:3.30.360.10 119 290 3.2E-31 T 14-10-2018 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 305 51.214 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 44 104 1.7E-8 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 SUPERFAMILY SSF55347 115 286 1.24E-33 T 14-10-2018 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 3 304 2.8E-116 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 Gene3D G3DSA:3.40.50.720 1 118 2.1E-18 T 14-10-2018 DDU33_05950 a028006c96d4737aa69007b5ff6a0f61 313 SUPERFAMILY SSF51735 3 135 2.74E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 Gene3D G3DSA:3.30.1360.80 1 169 9.7E-68 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 160 36.156 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 3.5E-59 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.1E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.1E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 122 141 3.1E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.1E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.1E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 SUPERFAMILY SSF63411 4 163 3.3E-65 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 163 5.0E-69 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_10585 42cbffe718fe1c16469e06eb183c7a4b 169 PIRSF PIRSF006160 1 163 1.5E-65 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DDU33_01720 0135e44fc2c8c03a50e53f94255cdc80 148 SMART SM00450 46 144 1.6E-11 T 14-10-2018 IPR001763 Rhodanese-like domain DDU33_01720 0135e44fc2c8c03a50e53f94255cdc80 148 Gene3D G3DSA:3.40.250.10 45 148 4.2E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DDU33_01720 0135e44fc2c8c03a50e53f94255cdc80 148 Pfam PF00581 Rhodanese-like domain 51 140 2.6E-14 T 14-10-2018 IPR001763 Rhodanese-like domain DDU33_01720 0135e44fc2c8c03a50e53f94255cdc80 148 SUPERFAMILY SSF52821 21 146 8.51E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 Pfam PF12631 MnmE helical domain 121 449 2.5E-59 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 Gene3D G3DSA:3.40.50.300 215 380 4.9E-103 T 14-10-2018 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 PRINTS PR00449 Transforming protein P21 ras signature 324 337 8.3E-5 T 14-10-2018 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 PRINTS PR00449 Transforming protein P21 ras signature 215 236 8.3E-5 T 14-10-2018 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 452 3.1E-102 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 452 32.531 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 364 1.9E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 SUPERFAMILY SSF52540 70 370 6.37E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 Gene3D G3DSA:3.30.1360.120 1 119 4.0E-36 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 1.8E-33 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 Pfam PF01926 50S ribosome-binding GTPase 216 334 6.4E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 Gene3D G3DSA:1.20.120.430 120 452 4.9E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DDU33_04055 3a6721dfd916ecdef03f37a88e56ea3d 452 SUPERFAMILY SSF116878 119 452 3.66E-51 T 14-10-2018 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 Pfam PF14622 Ribonuclease-III-like 20 135 2.1E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 Pfam PF00035 Double-stranded RNA binding motif 153 219 4.9E-14 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 SUPERFAMILY SSF69065 2 156 2.27E-49 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 Gene3D G3DSA:3.30.160.20 151 222 9.9E-21 T 14-10-2018 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 SMART SM00358 153 221 2.4E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.745 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 SUPERFAMILY SSF54768 106 220 8.33E-28 T 14-10-2018 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 SMART SM00535 18 146 7.9E-55 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 Gene3D G3DSA:1.10.1520.10 1 144 2.5E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DDU33_07480 925a7630e3b3f1224eb9b96aac97c223 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 219 6.6E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DDU33_06305 bad345677282e3e8bc1bf994a19db19a 325 Pfam PF03547 Membrane transport protein 11 145 3.6E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDU33_07425 959344b051b11c0eb3745e542ef36718 443 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 2 441 56.311 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 DDU33_07425 959344b051b11c0eb3745e542ef36718 443 Pfam PF17193 MukF C-terminal domain 284 441 1.3E-75 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain DDU33_07425 959344b051b11c0eb3745e542ef36718 443 PIRSF PIRSF018282 2 441 1.5E-247 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 DDU33_07425 959344b051b11c0eb3745e542ef36718 443 Gene3D G3DSA:1.20.58.590 120 312 4.1E-85 T 14-10-2018 IPR036141 MukF, middle domain superfamily DDU33_07425 959344b051b11c0eb3745e542ef36718 443 Pfam PF03882 MukF winged-helix domain 4 118 4.1E-54 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain DDU33_07425 959344b051b11c0eb3745e542ef36718 443 Gene3D G3DSA:1.10.10.10 25 119 1.7E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_07425 959344b051b11c0eb3745e542ef36718 443 SUPERFAMILY SSF46785 9 119 7.34E-45 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_07425 959344b051b11c0eb3745e542ef36718 443 Pfam PF17192 MukF middle domain 122 282 9.3E-83 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain DDU33_07425 959344b051b11c0eb3745e542ef36718 443 Gene3D G3DSA:1.10.225.40 354 443 1.3E-42 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily DDU33_07425 959344b051b11c0eb3745e542ef36718 443 SUPERFAMILY SSF140570 120 282 1.57E-76 T 14-10-2018 IPR036141 MukF, middle domain superfamily DDU33_02115 91f5328777dfb2757c975617790ff776 441 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 431 28.897 T 14-10-2018 IPR026593 Protein translocase subunit SecY DDU33_02115 91f5328777dfb2757c975617790ff776 441 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 427 1.1E-135 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_02115 91f5328777dfb2757c975617790ff776 441 Pfam PF00344 SecY translocase 75 414 5.9E-114 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_02115 91f5328777dfb2757c975617790ff776 441 SUPERFAMILY SSF103491 14 422 1.7E-130 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_02115 91f5328777dfb2757c975617790ff776 441 Gene3D G3DSA:1.10.3370.10 12 427 9.3E-157 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 1.5E-97 T 14-10-2018 DDU33_02115 91f5328777dfb2757c975617790ff776 441 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_02115 91f5328777dfb2757c975617790ff776 441 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_02115 91f5328777dfb2757c975617790ff776 441 PIRSF PIRSF004557 7 438 1.6E-124 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 SMART SM01235 13 152 8.5E-60 T 14-10-2018 IPR025992 Haem-binding domain DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 Gene3D G3DSA:1.10.760.10 182 328 4.3E-103 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 Gene3D G3DSA:1.10.760.10 179 456 4.3E-103 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 Pfam PF00034 Cytochrome c 336 451 9.4E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 Pfam PF03150 Di-haem cytochrome c peroxidase 182 328 5.4E-45 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 SUPERFAMILY SSF46626 1 153 4.08E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 SUPERFAMILY SSF46626 164 316 4.84E-43 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 SUPERFAMILY SSF46626 315 456 1.04E-35 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DDU33_00955 170afe995fcdf2a9f1ccf3a6732f4ea1 465 Pfam PF14376 Haem-binding domain 17 149 1.1E-34 T 14-10-2018 IPR025992 Haem-binding domain DDU33_09140 dfacd0700cc5c0cb973d8d5bcb8644b4 244 Pfam PF00588 SpoU rRNA Methylase family 7 156 2.2E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDU33_09140 dfacd0700cc5c0cb973d8d5bcb8644b4 244 SUPERFAMILY SSF75217 6 167 3.2E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DDU33_09140 dfacd0700cc5c0cb973d8d5bcb8644b4 244 Gene3D G3DSA:1.10.8.590 180 243 1.6E-27 T 14-10-2018 DDU33_09140 dfacd0700cc5c0cb973d8d5bcb8644b4 244 Gene3D G3DSA:3.40.1280.10 2 166 1.1E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDU33_09140 dfacd0700cc5c0cb973d8d5bcb8644b4 244 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 5 242 1.0E-86 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DDU33_09140 dfacd0700cc5c0cb973d8d5bcb8644b4 244 PIRSF PIRSF004808 2 243 7.7E-73 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 SMART SM00354 1 71 3.6E-35 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 SUPERFAMILY SSF53822 60 332 1.85E-92 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 SUPERFAMILY SSF47413 1 59 3.18E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 Pfam PF13377 Periplasmic binding protein-like domain 169 331 7.6E-43 T 14-10-2018 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 Gene3D G3DSA:3.40.50.2300 69 323 8.1E-90 T 14-10-2018 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 61.633 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 Gene3D G3DSA:1.10.260.40 3 59 4.3E-24 T 14-10-2018 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09640 be8f68788b9bf40ce9759e89381a94bf 336 Gene3D G3DSA:3.40.50.2300 160 289 8.1E-90 T 14-10-2018 DDU33_10615 8bde8c162ba7a9df969a007f9a395036 236 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 5 185 1.5E-19 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 DDU33_01700 398b40e6f1b4bb621ce88d18802daf62 140 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 134 6.5E-42 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DDU33_01700 398b40e6f1b4bb621ce88d18802daf62 140 Gene3D G3DSA:3.40.50.10110 1 140 2.8E-49 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DDU33_01700 398b40e6f1b4bb621ce88d18802daf62 140 SUPERFAMILY SSF102400 2 138 8.63E-47 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 SUPERFAMILY SSF52540 1 351 5.44E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 SUPERFAMILY SSF52980 789 1079 4.02E-47 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 Gene3D G3DSA:1.10.486.10 448 652 1.6E-150 T 14-10-2018 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 Gene3D G3DSA:3.40.50.300 340 777 1.6E-150 T 14-10-2018 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 Gene3D G3DSA:3.40.50.10930 4 321 2.4E-102 T 14-10-2018 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1020 4.7E-304 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1046 18.593 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 776 9.7E-269 T 14-10-2018 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 Gene3D G3DSA:1.10.10.160 79 209 2.4E-102 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 PIRSF PIRSF000980 1 1085 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 Gene3D G3DSA:1.10.10.990 836 903 6.1E-6 T 14-10-2018 DDU33_04120 6e44f945f3a4935ae15e83559809e109 1085 SUPERFAMILY SSF52540 355 783 5.31E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 SUPERFAMILY SSF47144 84 171 2.75E-22 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 SUPERFAMILY SSF46565 3 70 4.71E-15 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 14 170 6.4E-43 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 2 171 23.115 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 Gene3D G3DSA:1.20.1280.20 81 172 1.1E-20 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 162 6.8E-17 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 SMART SM00271 2 67 1.2E-8 T 14-10-2018 IPR001623 DnaJ domain DDU33_09410 392fa6731384e5ef7f4469196dd668ea 173 Gene3D G3DSA:1.10.287.110 1 74 5.9E-19 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 Gene3D G3DSA:3.30.43.10 2 67 6.9E-20 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 4 329 1.9E-110 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 SUPERFAMILY SSF56176 4 195 3.49E-45 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 Gene3D G3DSA:3.30.465.10 68 217 9.4E-55 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 Pfam PF01565 FAD binding domain 19 148 8.9E-24 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 204 327 4.1E-36 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 Gene3D G3DSA:3.90.78.10 218 340 5.0E-48 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 341 86.829 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_01230 6b46fa425641e462dd24e99661bf5b78 341 SUPERFAMILY SSF56194 201 336 1.44E-53 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 Gene3D G3DSA:3.40.50.80 277 395 3.2E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 PIRSF PIRSF000044 2 409 8.1E-222 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 Gene3D G3DSA:2.40.30.10 128 266 1.6E-52 T 14-10-2018 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 Gene3D G3DSA:3.10.20.30 36 127 8.9E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 211 218 4.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 375 383 4.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 297 4.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 304 313 4.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 Pfam PF00970 Oxidoreductase FAD-binding domain 206 268 2.2E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 47 116 1.1E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 SUPERFAMILY SSF63380 107 274 1.04E-36 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 6 409 2.2E-222 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 SUPERFAMILY SSF52343 257 404 1.18E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 SUPERFAMILY SSF54292 37 126 4.56E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 Pfam PF00175 Oxidoreductase NAD-binding domain 279 388 7.9E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDU33_05545 27e6ca9266fd6d4708bd7eab7d75d43a 409 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 409 62.661 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 DDU33_08375 8251974bc24629a1754e583aaa0a74eb 163 Gene3D G3DSA:3.40.390.30 3 160 5.8E-57 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DDU33_08375 8251974bc24629a1754e583aaa0a74eb 163 Pfam PF02130 Uncharacterized protein family UPF0054 27 149 4.1E-40 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DDU33_08375 8251974bc24629a1754e583aaa0a74eb 163 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 150 2.2E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DDU33_08375 8251974bc24629a1754e583aaa0a74eb 163 SUPERFAMILY SSF55486 5 155 1.03E-49 T 14-10-2018 DDU33_08375 8251974bc24629a1754e583aaa0a74eb 163 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site DDU33_08375 8251974bc24629a1754e583aaa0a74eb 163 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 153 24.772 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 SUPERFAMILY SSF54211 194 335 7.59E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Pfam PF08676 MutL C terminal dimerisation domain 469 585 2.3E-17 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 4 645 24.739 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Gene3D G3DSA:2.30.42.20 470 629 3.1E-25 T 14-10-2018 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 96 102 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 SMART SM01340 217 335 3.8E-58 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 SUPERFAMILY SSF55874 6 203 3.67E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Gene3D G3DSA:3.30.565.10 5 221 8.8E-72 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Gene3D G3DSA:3.30.1370.100 508 602 3.1E-25 T 14-10-2018 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 5 315 1.8E-103 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 124 1.5E-13 T 14-10-2018 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 217 334 1.3E-38 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 Gene3D G3DSA:3.30.230.10 222 334 1.7E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 SMART SM00853 470 616 4.8E-5 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DDU33_01210 53ef8a475a1017a8a10bfe3296e23186 646 SUPERFAMILY SSF118116 466 629 3.27E-22 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 Gene3D G3DSA:3.40.50.300 262 509 3.0E-63 T 14-10-2018 DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 SMART SM00382 294 485 5.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 SMART SM00382 29 224 3.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 SUPERFAMILY SSF52540 264 488 1.93E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 SUPERFAMILY SSF52540 4 231 1.95E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 Pfam PF12698 ABC-2 family transporter protein 564 901 3.6E-41 T 14-10-2018 DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 Pfam PF00005 ABC transporter 20 167 3.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 Pfam PF00005 ABC transporter 285 429 1.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00395 917d0f5f02ca7c910b068b59539ec58d 909 Gene3D G3DSA:3.40.50.300 2 244 2.5E-62 T 14-10-2018 DDU33_08495 c7f1b92d445e141832541eaa0f05f01f 496 SMART SM00382 22 329 1.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08495 c7f1b92d445e141832541eaa0f05f01f 496 SUPERFAMILY SSF52540 16 383 8.9E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08495 c7f1b92d445e141832541eaa0f05f01f 496 Gene3D G3DSA:3.40.50.300 201 385 3.9E-22 T 14-10-2018 DDU33_08495 c7f1b92d445e141832541eaa0f05f01f 496 Gene3D G3DSA:3.40.50.300 3 87 1.3E-11 T 14-10-2018 DDU33_08495 c7f1b92d445e141832541eaa0f05f01f 496 Pfam PF05872 Bacterial protein of unknown function (DUF853) 6 493 6.1E-227 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal DDU33_09885 07742dfff6f06e9c506230ea7c926ece 305 Gene3D G3DSA:3.90.1670.10 22 305 2.5E-85 T 14-10-2018 IPR024064 FdhE-like superfamily DDU33_09885 07742dfff6f06e9c506230ea7c926ece 305 PIRSF PIRSF018296 1 305 1.2E-124 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDU33_09885 07742dfff6f06e9c506230ea7c926ece 305 SUPERFAMILY SSF144020 22 302 4.71E-93 T 14-10-2018 IPR024064 FdhE-like superfamily DDU33_09885 07742dfff6f06e9c506230ea7c926ece 305 Pfam PF04216 Protein involved in formate dehydrogenase formation 20 302 2.9E-109 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDU33_09885 07742dfff6f06e9c506230ea7c926ece 305 Hamap MF_00611 Protein FdhE [fdhE]. 3 304 44.29 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDU33_09885 07742dfff6f06e9c506230ea7c926ece 305 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 302 1.4E-97 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DDU33_06040 3dc931e8596ed6676e147d5c024b1052 424 Gene3D G3DSA:1.25.40.10 9 173 5.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_06040 3dc931e8596ed6676e147d5c024b1052 424 SUPERFAMILY SSF48452 21 113 9.7E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_03945 93df5812798c9ea61594396bdcc85799 354 Gene3D G3DSA:3.10.310.10 4 349 2.3E-120 T 14-10-2018 DDU33_03945 93df5812798c9ea61594396bdcc85799 354 Gene3D G3DSA:3.10.310.10 166 335 2.3E-120 T 14-10-2018 DDU33_03945 93df5812798c9ea61594396bdcc85799 354 Pfam PF04303 PrpF protein 1 349 1.5E-110 T 14-10-2018 IPR007400 PrpF protein DDU33_03945 93df5812798c9ea61594396bdcc85799 354 SUPERFAMILY SSF54506 170 352 2.9E-59 T 14-10-2018 DDU33_03945 93df5812798c9ea61594396bdcc85799 354 SUPERFAMILY SSF54506 2 164 7.22E-56 T 14-10-2018 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 SUPERFAMILY SSF50447 229 318 2.7E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 Pfam PF00009 Elongation factor Tu GTP binding domain 11 212 3.7E-37 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 SUPERFAMILY SSF52540 8 215 2.44E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 Gene3D G3DSA:3.40.50.300 2 225 2.0E-61 T 14-10-2018 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 Gene3D G3DSA:2.40.30.10 323 427 7.4E-35 T 14-10-2018 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 10 426 8.5E-154 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 SUPERFAMILY SSF50465 324 427 1.34E-31 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.3E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 PRINTS PR00315 GTP-binding elongation factor signature 68 76 1.3E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 PRINTS PR00315 GTP-binding elongation factor signature 104 115 1.3E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 PRINTS PR00315 GTP-binding elongation factor signature 149 158 1.3E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 PRINTS PR00315 GTP-binding elongation factor signature 88 98 1.3E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03805 670629f2cc2eb816ab66f3bcfe76ba59 430 Gene3D G3DSA:2.40.30.10 229 320 7.0E-19 T 14-10-2018 DDU33_05685 dcae0b7c7823b5998d5cbb9e99a8796c 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 11 330 2.9E-124 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 DDU33_05685 dcae0b7c7823b5998d5cbb9e99a8796c 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 23 324 1.8E-107 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 DDU33_05685 dcae0b7c7823b5998d5cbb9e99a8796c 330 Gene3D G3DSA:3.40.190.10 127 325 1.9E-88 T 14-10-2018 DDU33_05685 dcae0b7c7823b5998d5cbb9e99a8796c 330 Pfam PF13416 Bacterial extracellular solute-binding protein 48 291 6.8E-19 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DDU33_05685 dcae0b7c7823b5998d5cbb9e99a8796c 330 Gene3D G3DSA:3.40.190.10 28 302 1.9E-88 T 14-10-2018 DDU33_05685 dcae0b7c7823b5998d5cbb9e99a8796c 330 SUPERFAMILY SSF53850 25 329 3.75E-55 T 14-10-2018 DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 Gene3D G3DSA:3.40.47.10 6 258 2.1E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 Gene3D G3DSA:3.40.47.10 259 405 6.0E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 2.2E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 SUPERFAMILY SSF53901 214 403 5.35E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 8.8E-45 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 SMART SM00825 Beta-ketoacyl synthase 4 405 4.5E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DDU33_10700 3f2a1d173f78545f26de900bab0f8759 405 SUPERFAMILY SSF53901 1 252 1.48E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 Gene3D G3DSA:1.20.1560.10 11 353 4.1E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 Pfam PF00005 ABC transporter 380 534 2.9E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 Pfam PF00664 ABC transporter transmembrane region 43 310 1.9E-13 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 Gene3D G3DSA:3.40.50.300 354 607 1.3E-92 T 14-10-2018 DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 SMART SM00382 389 580 3.1E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 SUPERFAMILY SSF90123 32 345 2.88E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_10590 20ce0f8de0a5132c935778c0c8e17bce 614 SUPERFAMILY SSF52540 354 604 1.78E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 Pfam PF00482 Type II secretion system (T2SS), protein F 269 389 2.3E-25 T 14-10-2018 IPR018076 Type II secretion system F domain DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 2.1E-21 T 14-10-2018 IPR018076 Type II secretion system F domain DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 1.6E-14 T 14-10-2018 IPR003004 GspF/PilC family DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 1.6E-14 T 14-10-2018 IPR003004 GspF/PilC family DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 362 376 1.6E-14 T 14-10-2018 IPR003004 GspF/PilC family DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 378 397 1.6E-14 T 14-10-2018 IPR003004 GspF/PilC family DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 Gene3D G3DSA:1.20.81.30 251 364 5.4E-21 T 14-10-2018 DDU33_09250 cff3b29213776c641d7ba7513b5e0533 398 Gene3D G3DSA:1.20.81.30 48 165 3.7E-21 T 14-10-2018 DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 Gene3D G3DSA:3.90.1150.10 114 449 4.5E-63 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 3.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 SUPERFAMILY SSF53383 115 450 6.25E-65 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 Pfam PF00155 Aminotransferase class I and II 128 447 8.4E-28 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 Gene3D G3DSA:3.40.640.10 142 360 4.5E-63 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 Gene3D G3DSA:1.10.10.10 2 70 5.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 SMART SM00345 10 69 6.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_02325 b3c8eaeea0a41b24446b31772b07d08d 465 SUPERFAMILY SSF46785 3 71 1.02E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 Pfam PF00924 Mechanosensitive ion channel 880 1078 7.6E-45 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 SUPERFAMILY SSF82861 835 919 3.01E-6 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 SUPERFAMILY SSF82689 990 1089 3.53E-18 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 Pfam PF12795 Mechanosensitive ion channel porin domain 37 258 1.1E-26 T 14-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 Gene3D G3DSA:3.30.70.100 989 1083 2.3E-13 T 14-10-2018 DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 SUPERFAMILY SSF50182 922 987 1.47E-14 T 14-10-2018 IPR010920 LSM domain superfamily DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 Gene3D G3DSA:2.30.30.60 937 986 7.3E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DDU33_08725 358f59cc99852bfb8d0e91268cb56422 1106 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 488 822 1.9E-97 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.9E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.9E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.9E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 Gene3D G3DSA:1.10.1660.10 1 116 3.7E-33 T 14-10-2018 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 SUPERFAMILY SSF46955 1 126 1.1E-36 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.4E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 SMART SM00422 1 70 1.9E-27 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_10755 8eedeffb63805f7556717ec57ef22fa1 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 3.6E-45 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 Pfam PF00664 ABC transporter transmembrane region 26 293 4.8E-33 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 Pfam PF00005 ABC transporter 366 511 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 SUPERFAMILY SSF52540 359 575 2.58E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 Gene3D G3DSA:3.40.50.300 334 579 1.9E-69 T 14-10-2018 DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 553 8.8E-175 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 SMART SM00382 374 557 1.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 SUPERFAMILY SSF90123 11 334 1.57E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_07105 65c1e63f1461761f785e5c679a54eca6 579 Gene3D G3DSA:1.20.1560.10 1 333 1.3E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 SMART SM00954 235 345 2.7E-47 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 SUPERFAMILY SSF109604 3 190 3.93E-77 T 14-10-2018 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 SUPERFAMILY SSF55021 497 566 9.51E-9 T 14-10-2018 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Pfam PF04607 Region found in RelA / SpoT proteins 235 343 2.7E-28 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Gene3D G3DSA:3.30.460.10 193 325 2.5E-40 T 14-10-2018 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Gene3D G3DSA:3.10.20.30 381 453 1.7E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Pfam PF02824 TGS domain 388 447 1.6E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Pfam PF13328 HD domain 26 175 3.0E-53 T 14-10-2018 IPR003607 HD/PDEase domain DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 SUPERFAMILY SSF81301 181 392 5.56E-53 T 14-10-2018 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Gene3D G3DSA:3.30.70.260 493 568 4.4E-13 T 14-10-2018 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 SMART SM00471 41 153 3.0E-11 T 14-10-2018 IPR003607 HD/PDEase domain DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Pfam PF13291 ACT domain 491 565 3.9E-14 T 14-10-2018 IPR002912 ACT domain DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 SUPERFAMILY SSF81271 375 447 5.67E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 483 1.5E-208 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 DDU33_01800 c7ec0edb5e55ec05903fb096306e3e24 568 Gene3D G3DSA:1.10.3210.10 4 190 3.6E-82 T 14-10-2018 DDU33_07055 58330dfdb32a8c1a3b241d15fa88ebdd 129 SUPERFAMILY SSF55298 1 128 3.3E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DDU33_07055 58330dfdb32a8c1a3b241d15fa88ebdd 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.3E-52 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 DDU33_07055 58330dfdb32a8c1a3b241d15fa88ebdd 129 Pfam PF01042 Endoribonuclease L-PSP 7 127 7.4E-44 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DDU33_07055 58330dfdb32a8c1a3b241d15fa88ebdd 129 Gene3D G3DSA:3.30.1330.40 1 129 5.5E-49 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DDU33_07055 58330dfdb32a8c1a3b241d15fa88ebdd 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 DDU33_04665 43ff4400b1c9a846303ca33eb612f034 211 SUPERFAMILY SSF52540 7 199 9.29E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04665 43ff4400b1c9a846303ca33eb612f034 211 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_04665 43ff4400b1c9a846303ca33eb612f034 211 Pfam PF00005 ABC transporter 24 163 6.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_04665 43ff4400b1c9a846303ca33eb612f034 211 Gene3D G3DSA:3.40.50.300 2 209 2.8E-40 T 14-10-2018 DDU33_04665 43ff4400b1c9a846303ca33eb612f034 211 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 7 206 3.7E-74 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 DDU33_08615 ffac28d8f1fa2bcf2a642b7ae962ef58 226 Gene3D G3DSA:1.20.58.220 1 226 6.5E-61 T 14-10-2018 IPR038078 PhoU-like domain superfamily DDU33_08615 ffac28d8f1fa2bcf2a642b7ae962ef58 226 Pfam PF01865 Protein of unknown function DUF47 7 224 4.5E-65 T 14-10-2018 IPR018445 Putative phosphate transport regulator DDU33_08615 ffac28d8f1fa2bcf2a642b7ae962ef58 226 SUPERFAMILY SSF109755 27 206 2.27E-15 T 14-10-2018 DDU33_08615 ffac28d8f1fa2bcf2a642b7ae962ef58 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 3 225 1.0E-65 T 14-10-2018 IPR002727 Protein of unknown function DUF47 DDU33_08710 82120199cf7f1e7c8f08e2210b4835ee 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 236 3.2E-103 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DDU33_08710 82120199cf7f1e7c8f08e2210b4835ee 237 Pfam PF00696 Amino acid kinase family 7 216 1.3E-26 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DDU33_08710 82120199cf7f1e7c8f08e2210b4835ee 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 42.415 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DDU33_08710 82120199cf7f1e7c8f08e2210b4835ee 237 SUPERFAMILY SSF53633 4 236 4.45E-69 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_08710 82120199cf7f1e7c8f08e2210b4835ee 237 Gene3D G3DSA:3.40.1160.10 1 237 8.8E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_08710 82120199cf7f1e7c8f08e2210b4835ee 237 PIRSF PIRSF005650 1 237 3.4E-87 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 SUPERFAMILY SSF53850 93 293 7.17E-37 T 14-10-2018 DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 Gene3D G3DSA:1.10.10.10 7 96 3.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 SUPERFAMILY SSF46785 3 86 4.12E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 Pfam PF03466 LysR substrate binding domain 93 290 3.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 Gene3D G3DSA:3.40.190.10 103 287 1.8E-49 T 14-10-2018 DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04735 90752ed5e984c30eca650a0280e60b12 296 Gene3D G3DSA:3.40.190.10 163 260 1.8E-49 T 14-10-2018 DDU33_08850 83476fa810bfefa525d602ad78170974 278 SUPERFAMILY SSF54211 2 154 1.75E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_08850 83476fa810bfefa525d602ad78170974 278 Gene3D G3DSA:3.30.70.890 157 275 1.8E-26 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DDU33_08850 83476fa810bfefa525d602ad78170974 278 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 274 3.4E-107 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DDU33_08850 83476fa810bfefa525d602ad78170974 278 Gene3D G3DSA:3.30.230.10 1 155 1.1E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_08850 83476fa810bfefa525d602ad78170974 278 Pfam PF08544 GHMP kinases C terminal 191 249 8.8E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DDU33_08850 83476fa810bfefa525d602ad78170974 278 Pfam PF00288 GHMP kinases N terminal domain 84 140 1.0E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DDU33_08850 83476fa810bfefa525d602ad78170974 278 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 267 31.521 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DDU33_08850 83476fa810bfefa525d602ad78170974 278 SUPERFAMILY SSF55060 157 274 2.73E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DDU33_08850 83476fa810bfefa525d602ad78170974 278 PIRSF PIRSF010376 1 275 1.2E-86 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 Gene3D G3DSA:3.60.21.10 21 357 3.0E-116 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 Pfam PF02872 5'-nucleotidase, C-terminal domain 359 507 8.0E-38 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 ProSitePatterns PS00786 5'-nucleotidase signature 2. 104 115 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 PRINTS PR01607 Apyrase family signature 27 45 7.9E-49 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 PRINTS PR01607 Apyrase family signature 202 219 7.9E-49 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 PRINTS PR01607 Apyrase family signature 278 298 7.9E-49 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 PRINTS PR01607 Apyrase family signature 412 435 7.9E-49 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 PRINTS PR01607 Apyrase family signature 233 256 7.9E-49 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 PRINTS PR01607 Apyrase family signature 481 500 7.9E-49 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 SUPERFAMILY SSF56300 22 355 4.62E-94 T 14-10-2018 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 SUPERFAMILY SSF55816 358 539 2.49E-53 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 Gene3D G3DSA:3.90.780.10 358 546 3.8E-61 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_07215 8ad35fe8487fc0b4e11eb2fa2f9aa1d3 547 Pfam PF00149 Calcineurin-like phosphoesterase 29 250 6.4E-18 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 SUPERFAMILY SSF56420 2 165 1.44E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 PRINTS PR01576 Peptide deformylase signature 120 149 1.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 PRINTS PR01576 Peptide deformylase signature 89 100 1.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 PRINTS PR01576 Peptide deformylase signature 101 119 1.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 Gene3D G3DSA:3.90.45.10 1 169 1.3E-67 T 14-10-2018 IPR036821 Peptide deformylase superfamily DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.35 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 PIRSF PIRSF004749 1 170 1.7E-59 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 Pfam PF01327 Polypeptide deformylase 4 152 2.2E-51 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03390 c721ac5bc8a397b82b04333d303a28de 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 6.3E-63 T 14-10-2018 IPR023635 Peptide deformylase DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 Gene3D G3DSA:3.40.275.10 178 342 3.8E-76 T 14-10-2018 IPR038392 L-fucose isomerase, domain 2 superfamily KEGG: 00051+5.3.1.25 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 Pfam PF02952 L-fucose isomerase, C-terminal domain 388 552 8.6E-54 T 14-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 SUPERFAMILY SSF53743 8 357 1.57E-150 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 Hamap MF_01254 L-fucose isomerase [fucI]. 5 588 69.226 T 14-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 Pfam PF07881 L-fucose isomerase, first N-terminal domain 10 176 8.4E-81 T 14-10-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 Pfam PF07882 L-fucose isomerase, second N-terminal domain 177 356 1.1E-89 T 14-10-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 SUPERFAMILY SSF50443 358 588 1.39E-123 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 Gene3D G3DSA:3.20.14.10 343 588 1.5E-125 T 14-10-2018 IPR038393 L-fucose isomerase, domain 3 superfamily KEGG: 00051+5.3.1.25 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 Gene3D G3DSA:3.40.50.1070 3 177 4.7E-88 T 14-10-2018 IPR038391 L-fucose isomerase, domain 1 superfamily KEGG: 00051+5.3.1.25 DDU33_03445 fe812f5ec594594b0105d09f346cdb1d 588 TIGRFAM TIGR01089 fucI: L-fucose isomerase 10 588 0.0 T 14-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 DDU33_10525 681529080f5ba6522b393067581cf8d6 156 SUPERFAMILY SSF102114 12 111 4.12E-6 T 14-10-2018 DDU33_10525 681529080f5ba6522b393067581cf8d6 156 TIGRFAM TIGR02826 RNR_activ_nrdG3: anaerobic ribonucleoside-triphosphate reductase activating protein 6 151 4.9E-59 T 14-10-2018 IPR014191 Anaerobic ribonucleoside-triphosphate reductase activator DDU33_10525 681529080f5ba6522b393067581cf8d6 156 Gene3D G3DSA:3.20.20.70 9 119 1.4E-13 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_10525 681529080f5ba6522b393067581cf8d6 156 Pfam PF13353 4Fe-4S single cluster domain 23 123 1.3E-10 T 14-10-2018 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 225 257 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 356 374 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 225 246 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 247 266 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 315 340 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.6E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 Gene3D G3DSA:3.40.50.1980 229 344 7.6E-122 T 14-10-2018 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 SUPERFAMILY SSF53720 3 423 4.71E-84 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 Pfam PF00815 Histidinol dehydrogenase 27 422 6.7E-167 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 421 1.2E-163 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 422 40.54 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 PIRSF PIRSF000099 1 425 1.2E-162 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DDU33_00340 b8f8cddefc32155a1b7564c7fddcd5a8 427 Gene3D G3DSA:3.40.50.1980 30 227 7.6E-122 T 14-10-2018 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 Gene3D G3DSA:1.10.260.40 3 59 1.0E-21 T 14-10-2018 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 SUPERFAMILY SSF47413 2 59 6.48E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 SUPERFAMILY SSF53822 61 328 1.9E-85 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_03220 baf01770824affc0f72007d8f2358c50 329 Gene3D G3DSA:3.40.50.2300 160 322 1.7E-78 T 14-10-2018 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.7E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 Pfam PF13377 Periplasmic binding protein-like domain 169 328 4.9E-40 T 14-10-2018 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 Gene3D G3DSA:3.40.50.2300 69 321 1.7E-78 T 14-10-2018 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_03220 baf01770824affc0f72007d8f2358c50 329 SMART SM00354 1 71 6.2E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 SUPERFAMILY SSF53067 19 196 5.83E-54 T 14-10-2018 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 Gene3D G3DSA:3.90.640.10 238 310 1.1E-115 T 14-10-2018 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 PRINTS PR00301 70kDa heat shock protein signature 465 481 6.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 PRINTS PR00301 70kDa heat shock protein signature 359 379 6.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 PRINTS PR00301 70kDa heat shock protein signature 384 403 6.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 PRINTS PR00301 70kDa heat shock protein signature 211 221 6.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 PRINTS PR00301 70kDa heat shock protein signature 152 172 6.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 PRINTS PR00301 70kDa heat shock protein signature 328 344 6.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 PRINTS PR00301 70kDa heat shock protein signature 20 33 6.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.841 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 Gene3D G3DSA:3.30.420.40 194 360 1.1E-115 T 14-10-2018 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 Pfam PF00012 Hsp70 protein 21 599 8.7E-194 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 SUPERFAMILY SSF100920 383 536 2.88E-52 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 SUPERFAMILY SSF53067 200 376 1.1E-49 T 14-10-2018 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 Gene3D G3DSA:1.20.1270.10 520 615 3.6E-27 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 Gene3D G3DSA:3.30.420.40 22 373 1.1E-115 T 14-10-2018 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 SUPERFAMILY SSF100934 503 615 4.9E-33 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 4.8E-266 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DDU33_09390 b73f2788bc28631f95a4521f877db2ae 618 Gene3D G3DSA:2.60.34.10 378 519 2.2E-51 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 Gene3D G3DSA:3.40.50.720 1 208 6.4E-83 T 14-10-2018 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 Gene3D G3DSA:1.10.1040.10 209 493 1.5E-116 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 487 37.129 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 1.9E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 354 484 1.7E-17 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 SUPERFAMILY SSF48179 349 486 8.33E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 SUPERFAMILY SSF48179 210 341 8.67E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-56 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 7.0E-130 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DDU33_01675 9475f4d9b0c6bae46e4dcde3df1b460a 493 SUPERFAMILY SSF51735 28 209 4.99E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_06735 1e09e79e1434dba787c3389b48e94cb8 461 Gene3D G3DSA:1.20.1600.10 52 458 7.0E-83 T 14-10-2018 DDU33_06735 1e09e79e1434dba787c3389b48e94cb8 461 Pfam PF02321 Outer membrane efflux protein 62 252 1.6E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DDU33_06735 1e09e79e1434dba787c3389b48e94cb8 461 Pfam PF02321 Outer membrane efflux protein 281 455 1.9E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DDU33_06735 1e09e79e1434dba787c3389b48e94cb8 461 SUPERFAMILY SSF56954 2 457 1.7E-79 T 14-10-2018 DDU33_06735 1e09e79e1434dba787c3389b48e94cb8 461 Gene3D G3DSA:2.20.200.10 99 347 7.0E-83 T 14-10-2018 DDU33_00405 8633634641557559109da830f2181795 464 Gene3D G3DSA:2.20.200.10 97 351 3.4E-97 T 14-10-2018 DDU33_00405 8633634641557559109da830f2181795 464 SUPERFAMILY SSF56954 4 464 3.53E-76 T 14-10-2018 DDU33_00405 8633634641557559109da830f2181795 464 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 462 1.1E-70 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DDU33_00405 8633634641557559109da830f2181795 464 Pfam PF02321 Outer membrane efflux protein 60 237 4.1E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DDU33_00405 8633634641557559109da830f2181795 464 Pfam PF02321 Outer membrane efflux protein 281 460 3.2E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DDU33_00405 8633634641557559109da830f2181795 464 Gene3D G3DSA:1.20.1600.10 50 463 3.4E-97 T 14-10-2018 DDU33_04510 6d92b2f9136cdd5c097ca701f2cfaacd 264 SMART SM00382 37 226 4.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_04510 6d92b2f9136cdd5c097ca701f2cfaacd 264 Pfam PF00005 ABC transporter 29 175 8.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_04510 6d92b2f9136cdd5c097ca701f2cfaacd 264 Gene3D G3DSA:3.40.50.300 1 260 1.5E-63 T 14-10-2018 DDU33_04510 6d92b2f9136cdd5c097ca701f2cfaacd 264 SUPERFAMILY SSF52540 3 249 5.97E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 10 33 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 82 102 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 337 356 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 37 56 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 148 168 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 316 334 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 282 301 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 221 240 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.4E-84 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 1.4E-131 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 Gene3D G3DSA:1.20.1740.10 2 403 2.1E-13 T 14-10-2018 DDU33_05630 578dbc7b8d9ae8d279468731bbed1dfc 404 Pfam PF03222 Tryptophan/tyrosine permease family 1 390 3.6E-129 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DDU33_04320 95bba8af0bf3d23db051b811f01a43dd 56 SUPERFAMILY SSF57829 3 54 2.26E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DDU33_04320 95bba8af0bf3d23db051b811f01a43dd 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 8.9E-28 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04320 95bba8af0bf3d23db051b811f01a43dd 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_04320 95bba8af0bf3d23db051b811f01a43dd 56 Pfam PF00471 Ribosomal protein L33 8 54 2.9E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04320 95bba8af0bf3d23db051b811f01a43dd 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 15.257 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04320 95bba8af0bf3d23db051b811f01a43dd 56 Gene3D G3DSA:2.20.28.120 1 56 8.1E-30 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01135 98b241965e286781a37f5582bb7cc542 261 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 14-10-2018 DDU33_01135 98b241965e286781a37f5582bb7cc542 261 Gene3D G3DSA:3.30.1240.10 85 186 3.4E-68 T 14-10-2018 DDU33_01135 98b241965e286781a37f5582bb7cc542 261 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 8 256 3.0E-56 T 14-10-2018 IPR000150 Cof family GO:0016787 DDU33_01135 98b241965e286781a37f5582bb7cc542 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 230 1.6E-24 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDU33_01135 98b241965e286781a37f5582bb7cc542 261 SUPERFAMILY SSF56784 3 261 9.75E-64 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_01135 98b241965e286781a37f5582bb7cc542 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 257 1.7E-61 T 14-10-2018 DDU33_01135 98b241965e286781a37f5582bb7cc542 261 Gene3D G3DSA:3.40.50.1000 6 257 3.4E-68 T 14-10-2018 IPR023214 HAD superfamily DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 Pfam PF03741 Integral membrane protein TerC family 15 204 8.4E-44 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 SUPERFAMILY SSF56176 433 515 3.82E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 SMART SM01091 437 517 2.4E-14 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 Pfam PF00571 CBS domain 378 425 6.8E-4 T 14-10-2018 IPR000644 CBS domain DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 Gene3D G3DSA:3.10.580.10 283 439 3.5E-45 T 14-10-2018 DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 SUPERFAMILY SSF54631 292 434 5.78E-24 T 14-10-2018 DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 Pfam PF03471 Transporter associated domain 440 516 8.4E-15 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_10570 ad16fb868c78edfe17fdbe9519d5fe56 520 Gene3D G3DSA:3.30.465.10 440 518 4.8E-13 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DDU33_10125 338a6436c0adb2d9a34feeed84edec61 153 Gene3D G3DSA:3.30.420.10 1 153 5.2E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_10125 338a6436c0adb2d9a34feeed84edec61 153 Pfam PF00075 RNase H 2 140 1.1E-49 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DDU33_10125 338a6436c0adb2d9a34feeed84edec61 153 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 32.923 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 DDU33_10125 338a6436c0adb2d9a34feeed84edec61 153 SUPERFAMILY SSF53098 1 142 8.85E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_06690 ede9863ed133d05c766bc4d004e1438f 168 Pfam PF03968 OstA-like protein 32 141 8.4E-27 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DDU33_06690 ede9863ed133d05c766bc4d004e1438f 168 Gene3D G3DSA:2.60.450.10 22 157 1.4E-43 T 14-10-2018 DDU33_06690 ede9863ed133d05c766bc4d004e1438f 168 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 2 160 23.85 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DDU33_06690 ede9863ed133d05c766bc4d004e1438f 168 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 160 1.5E-47 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DDU33_01225 4811be319acb83a0636292d81508a278 258 Gene3D G3DSA:3.30.930.10 2 204 8.5E-61 T 14-10-2018 DDU33_01225 4811be319acb83a0636292d81508a278 258 SUPERFAMILY SSF55681 5 202 1.13E-54 T 14-10-2018 DDU33_01225 4811be319acb83a0636292d81508a278 258 Pfam PF03099 Biotin/lipoate A/B protein ligase family 20 144 1.8E-20 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DDU33_01225 4811be319acb83a0636292d81508a278 258 Pfam PF02237 Biotin protein ligase C terminal domain 206 251 8.0E-9 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDU33_01225 4811be319acb83a0636292d81508a278 258 Gene3D G3DSA:2.30.30.100 205 257 1.8E-15 T 14-10-2018 DDU33_01225 4811be319acb83a0636292d81508a278 258 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 19 251 1.4E-60 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDU33_01225 4811be319acb83a0636292d81508a278 258 SUPERFAMILY SSF50037 205 251 8.24E-9 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal DDU33_10815 8c2640780081ced427209cd15d86ca50 556 Pfam PF00005 ABC transporter 341 474 1.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10815 8c2640780081ced427209cd15d86ca50 556 Gene3D G3DSA:3.40.50.300 287 556 1.3E-77 T 14-10-2018 DDU33_10815 8c2640780081ced427209cd15d86ca50 556 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10815 8c2640780081ced427209cd15d86ca50 556 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 4 554 1.6E-299 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 DDU33_10815 8c2640780081ced427209cd15d86ca50 556 Pfam PF00005 ABC transporter 23 192 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10815 8c2640780081ced427209cd15d86ca50 556 SMART SM00382 349 519 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10815 8c2640780081ced427209cd15d86ca50 556 SMART SM00382 32 237 8.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10815 8c2640780081ced427209cd15d86ca50 556 SUPERFAMILY SSF52540 305 532 1.29E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10815 8c2640780081ced427209cd15d86ca50 556 Pfam PF12848 ABC transporter 231 304 7.1E-14 T 14-10-2018 IPR032781 ABC-transporter extension domain DDU33_10815 8c2640780081ced427209cd15d86ca50 556 Gene3D G3DSA:3.40.50.300 3 286 9.9E-90 T 14-10-2018 DDU33_10815 8c2640780081ced427209cd15d86ca50 556 SUPERFAMILY SSF52540 12 244 1.81E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00065 1793176efe8b5c2d50c12a144aa0c8c6 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 243 3.0E-113 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DDU33_00065 1793176efe8b5c2d50c12a144aa0c8c6 251 SUPERFAMILY SSF53448 1 249 1.85E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_00065 1793176efe8b5c2d50c12a144aa0c8c6 251 Gene3D G3DSA:3.90.550.10 1 251 2.2E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_00065 1793176efe8b5c2d50c12a144aa0c8c6 251 Pfam PF02348 Cytidylyltransferase 5 223 1.3E-69 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DDU33_00065 1793176efe8b5c2d50c12a144aa0c8c6 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 250 45.624 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DDU33_05250 be5b1dd7c8db34edd90700d57aff818d 328 Gene3D G3DSA:3.40.50.150 149 328 2.0E-45 T 14-10-2018 DDU33_05250 be5b1dd7c8db34edd90700d57aff818d 328 Pfam PF08468 Methyltransferase small domain N-terminal 6 152 3.0E-48 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 DDU33_05250 be5b1dd7c8db34edd90700d57aff818d 328 Pfam PF05175 Methyltransferase small domain 157 324 3.2E-58 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DDU33_05250 be5b1dd7c8db34edd90700d57aff818d 328 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 2 328 43.389 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 DDU33_05250 be5b1dd7c8db34edd90700d57aff818d 328 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 257 263 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_05250 be5b1dd7c8db34edd90700d57aff818d 328 Gene3D G3DSA:3.40.50.150 1 148 2.3E-39 T 14-10-2018 DDU33_05250 be5b1dd7c8db34edd90700d57aff818d 328 SUPERFAMILY SSF53335 144 307 2.43E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Gene3D G3DSA:3.30.460.100 580 829 5.9E-82 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 SUPERFAMILY SSF81301 26 285 1.55E-84 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Pfam PF08335 GlnD PII-uridylyltransferase 845 937 1.5E-8 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Pfam PF08335 GlnD PII-uridylyltransferase 296 451 2.9E-43 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Gene3D G3DSA:1.20.120.1510 466 578 8.8E-25 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 SUPERFAMILY SSF81301 543 826 8.17E-84 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Gene3D G3DSA:1.20.120.330 284 455 2.9E-48 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Gene3D G3DSA:1.10.4050.10 11 108 3.3E-16 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 25 963 19.092 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 SUPERFAMILY SSF81593 286 451 1.41E-39 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Gene3D G3DSA:1.20.120.330 831 964 9.6E-39 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Gene3D G3DSA:3.30.460.10 109 283 3.1E-64 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 SUPERFAMILY SSF81593 836 961 4.24E-31 T 14-10-2018 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 29 274 1.1E-92 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DDU33_09710 601a04d228844b0cc90f5959c370389d 964 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 572 823 4.8E-90 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 SUPERFAMILY SSF103515 846 1162 1.57E-58 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 SUPERFAMILY SSF52743 252 582 3.67E-42 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 Pfam PF03797 Autotransporter beta-domain 887 1141 3.9E-50 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 Pfam PF00082 Subtilase family 285 564 3.9E-29 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 676 1162 1.7E-25 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 Gene3D G3DSA:3.40.50.200 262 574 9.0E-43 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 608 639 7.5E-9 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 Gene3D G3DSA:2.40.128.130 838 1162 3.6E-75 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 SMART SM00869 884 1151 1.2E-37 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 PRINTS PR00723 Subtilisin serine protease family (S8) signature 325 338 2.0E-6 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 PRINTS PR00723 Subtilisin serine protease family (S8) signature 285 304 2.0E-6 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DDU33_02225 0713129bdd66a083d68b9d30714748a8 1162 PRINTS PR00723 Subtilisin serine protease family (S8) signature 513 529 2.0E-6 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DDU33_01395 95537cd22416fae6df31a5cf185818ba 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 4.5E-21 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDU33_01395 95537cd22416fae6df31a5cf185818ba 113 Gene3D G3DSA:2.60.300.12 8 103 3.4E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DDU33_01395 95537cd22416fae6df31a5cf185818ba 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DDU33_01395 95537cd22416fae6df31a5cf185818ba 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.944 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 DDU33_01395 95537cd22416fae6df31a5cf185818ba 113 SUPERFAMILY SSF89360 6 99 2.22E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DDU33_01395 95537cd22416fae6df31a5cf185818ba 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 112 3.3E-38 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DDU33_02610 40692a6b5dfbffc5b932017e6e1b0f86 118 PIRSF PIRSF000179 5 118 3.2E-42 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDU33_02610 40692a6b5dfbffc5b932017e6e1b0f86 118 SUPERFAMILY SSF81343 12 117 9.81E-41 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02610 40692a6b5dfbffc5b932017e6e1b0f86 118 Gene3D G3DSA:1.20.1300.10 6 116 9.7E-33 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02610 40692a6b5dfbffc5b932017e6e1b0f86 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 118 23.648 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDU33_02610 40692a6b5dfbffc5b932017e6e1b0f86 118 Pfam PF02313 Fumarate reductase subunit D 11 114 7.7E-38 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDU33_02610 40692a6b5dfbffc5b932017e6e1b0f86 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 118 2.0E-25 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 PRINTS PR01467 Bacterial arginine repressor signature 36 51 1.5E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 PRINTS PR01467 Bacterial arginine repressor signature 19 32 1.5E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 PRINTS PR01467 Bacterial arginine repressor signature 115 130 1.5E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 PRINTS PR01467 Bacterial arginine repressor signature 84 97 1.5E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 SUPERFAMILY SSF55252 76 144 1.57E-20 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 Gene3D G3DSA:3.30.1360.40 69 149 1.7E-32 T 14-10-2018 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 TIGRFAM TIGR01529 argR_whole: arginine repressor 3 145 3.0E-45 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 Pfam PF02863 Arginine repressor, C-terminal domain 76 142 2.0E-23 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 Hamap MF_00173 Arginine repressor [argR]. 1 149 59.008 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 83 147 3.0E-19 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 Gene3D G3DSA:1.10.10.10 1 68 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 SUPERFAMILY SSF46785 5 71 4.17E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_05025 d183fa1723d954d63c2c5402c03a0337 150 Pfam PF01316 Arginine repressor, DNA binding domain 4 68 7.7E-22 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 DDU33_05540 b6a5a8f40d118ca8c37e9d641f71aba4 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 196 1.1E-55 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_05540 b6a5a8f40d118ca8c37e9d641f71aba4 198 PIRSF PIRSF006102 1 198 7.4E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_05540 b6a5a8f40d118ca8c37e9d641f71aba4 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 28.881 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 DDU33_05540 b6a5a8f40d118ca8c37e9d641f71aba4 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 197 4.6E-101 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 5 389 7.2E-172 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 217 389 7.1E-12 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 372 382 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 Gene3D G3DSA:3.40.1350.30 61 219 1.9E-69 T 14-10-2018 DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 SUPERFAMILY SSF53335 3 389 2.11E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 322 353 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 Gene3D G3DSA:3.40.50.150 16 383 1.9E-69 T 14-10-2018 DDU33_06420 b094abc1a90c1295c3a5a71c0eeb289a 391 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 3 390 77.734 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 DDU33_04275 940bdf8e98b3ccd9a63d3c0e5e2c06e9 103 SUPERFAMILY SSF141091 1 102 2.09E-37 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04275 940bdf8e98b3ccd9a63d3c0e5e2c06e9 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 9.0E-45 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04275 940bdf8e98b3ccd9a63d3c0e5e2c06e9 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_04275 940bdf8e98b3ccd9a63d3c0e5e2c06e9 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 9.1E-39 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04275 940bdf8e98b3ccd9a63d3c0e5e2c06e9 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.171 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Pfam PF00009 Elongation factor Tu GTP binding domain 2 166 1.9E-29 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 SUPERFAMILY SSF50465 276 359 3.96E-8 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Pfam PF09107 Elongation factor SelB, winged helix 569 614 6.1E-16 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 SUPERFAMILY SSF46785 424 492 1.14E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Gene3D G3DSA:1.10.10.10 494 554 2.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 SUPERFAMILY SSF52540 2 191 1.08E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Gene3D G3DSA:3.40.50.300 1 170 5.1E-45 T 14-10-2018 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Gene3D G3DSA:2.40.30.10 173 292 9.8E-27 T 14-10-2018 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Pfam PF09106 Elongation factor SelB, winged helix 432 487 7.2E-14 T 14-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Gene3D G3DSA:1.10.10.10 556 616 4.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 159 2.8E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 SUPERFAMILY SSF46785 561 616 6.44E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 Pfam PF03144 Elongation factor Tu domain 2 191 257 2.5E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 616 6.7E-190 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DDU33_03595 b7bb5367f105a3790cf43925dee83f72 621 SUPERFAMILY SSF50447 173 258 2.91E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_10610 ecd27cd6d7f1a275412e6afe596aa433 147 SUPERFAMILY SSF89946 4 120 2.09E-34 T 14-10-2018 IPR036701 RraB-like superfamily DDU33_10610 ecd27cd6d7f1a275412e6afe596aa433 147 Gene3D G3DSA:3.30.70.970 2 121 1.7E-40 T 14-10-2018 IPR036701 RraB-like superfamily DDU33_10610 ecd27cd6d7f1a275412e6afe596aa433 147 PIRSF PIRSF018193 1 138 1.2E-58 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B DDU33_10610 ecd27cd6d7f1a275412e6afe596aa433 147 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 1 113 28.845 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B DDU33_10610 ecd27cd6d7f1a275412e6afe596aa433 147 Pfam PF06877 Regulator of ribonuclease activity B 9 109 1.0E-29 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 Pfam PF01612 3'-5' exonuclease 7 174 5.4E-42 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 SUPERFAMILY SSF47819 197 302 1.31E-27 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 SUPERFAMILY SSF47819 298 371 8.72E-17 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 SUPERFAMILY SSF53098 5 213 3.99E-67 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 Pfam PF00570 HRDC domain 217 282 1.3E-12 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 Gene3D G3DSA:3.30.420.10 5 197 7.1E-65 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 TIGRFAM TIGR01388 rnd: ribonuclease D 9 366 1.0E-123 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 SMART SM00474 7 175 1.1E-45 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 Hamap MF_01899 Ribonuclease D [rnd]. 7 373 42.849 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 Gene3D G3DSA:1.10.150.80 199 296 7.1E-20 T 14-10-2018 DDU33_08480 9b649959870cff55ea8ed2517aa601af 373 Gene3D G3DSA:1.10.150.80 297 373 5.0E-20 T 14-10-2018 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 SUPERFAMILY SSF51984 3 91 7.72E-24 T 14-10-2018 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 Pfam PF08245 Mur ligase middle domain 110 293 4.2E-23 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 4 452 1.5E-246 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 Gene3D G3DSA:3.90.190.20 316 453 1.4E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 362 2.1E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 Pfam PF01225 Mur ligase family, catalytic domain 4 101 1.0E-17 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 SUPERFAMILY SSF53244 314 449 1.24E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 SUPERFAMILY SSF53623 96 310 1.07E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 Gene3D G3DSA:3.40.50.720 1 92 1.1E-35 T 14-10-2018 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 Gene3D G3DSA:3.40.1190.10 95 311 2.1E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_05270 20fa8c0d8c42ab1fbcbc43ed702bf354 454 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 3 452 56.566 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Gene3D G3DSA:3.40.50.300 34 258 3.2E-77 T 14-10-2018 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 627 703 8.5E-22 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Gene3D G3DSA:1.20.120.1080 452 555 2.5E-15 T 14-10-2018 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Gene3D G3DSA:3.40.50.300 259 424 8.5E-58 T 14-10-2018 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Pfam PF00270 DEAD/DEAH box helicase 90 239 2.5E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Pfam PF00271 Helicase conserved C-terminal domain 288 406 2.3E-14 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 SMART SM00382 98 387 7.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 SMART SM00490 307 407 2.4E-16 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 SMART SM00487 81 265 3.9E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Pfam PF04408 Helicase associated domain (HA2) 470 562 2.9E-15 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 SUPERFAMILY SSF52540 81 608 5.86E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 19 1300 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 SMART SM00847 467 564 2.0E-32 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DDU33_10165 4f0fd53132b24024c6be22cfc551d01b 1304 Pfam PF11898 Domain of unknown function (DUF3418) 718 1300 4.8E-224 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal DDU33_06245 2b8b60e82cccff6d9fcfd7e59f920763 74 Pfam PF01206 Sulfurtransferase TusA 4 73 1.6E-18 T 14-10-2018 IPR001455 TusA-like domain DDU33_06245 2b8b60e82cccff6d9fcfd7e59f920763 74 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 5 29 - T 14-10-2018 IPR001455 TusA-like domain DDU33_06245 2b8b60e82cccff6d9fcfd7e59f920763 74 SUPERFAMILY SSF64307 2 73 1.31E-20 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_06245 2b8b60e82cccff6d9fcfd7e59f920763 74 Gene3D G3DSA:3.30.110.40 1 73 3.2E-19 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_02065 11d737f5fd93553d0c62d2d283f14fec 837 SUPERFAMILY SSF56935 21 837 3.2E-45 T 14-10-2018 DDU33_02065 11d737f5fd93553d0c62d2d283f14fec 837 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 172 4.8E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_02065 11d737f5fd93553d0c62d2d283f14fec 837 Gene3D G3DSA:2.40.170.20 223 837 1.6E-13 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DDU33_02065 11d737f5fd93553d0c62d2d283f14fec 837 Gene3D G3DSA:2.170.130.10 21 177 1.0E-8 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 454 2.1E-203 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.887 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.6E-24 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.3E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.3E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.3E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.3E-27 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 SUPERFAMILY SSF48557 3 454 2.04E-137 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 Gene3D G3DSA:1.10.40.30 363 433 1.3E-146 T 14-10-2018 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 Gene3D G3DSA:1.10.275.10 1 107 1.4E-35 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 Pfam PF00206 Lyase 6 301 2.4E-87 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 Gene3D G3DSA:1.20.200.10 108 445 1.3E-146 T 14-10-2018 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 8.3E-67 T 14-10-2018 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 8.3E-67 T 14-10-2018 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 8.3E-67 T 14-10-2018 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 8.3E-67 T 14-10-2018 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 8.3E-67 T 14-10-2018 DDU33_05095 4b7ab2098d5d295689c80de2f588c1da 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 8.3E-67 T 14-10-2018 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 SUPERFAMILY SSF53067 242 480 4.01E-65 T 14-10-2018 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 SUPERFAMILY SSF53067 2 242 4.88E-75 T 14-10-2018 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 434 8.0E-30 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 TIGRFAM TIGR01312 XylB: xylulokinase 3 476 2.7E-182 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 Gene3D G3DSA:3.30.420.40 1 241 1.5E-90 T 14-10-2018 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 2.8E-79 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 Gene3D G3DSA:3.30.420.40 242 481 1.1E-82 T 14-10-2018 DDU33_01755 68b518aaf65cb157f2021815c090e5b4 481 PIRSF PIRSF000538 1 481 4.4E-136 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_02195 87e290ff2067456ee1c1d2257c5fbcc0 379 Gene3D G3DSA:3.90.1510.10 42 276 4.2E-139 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 DDU33_02195 87e290ff2067456ee1c1d2257c5fbcc0 379 SUPERFAMILY SSF110738 1 375 1.57E-139 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 DDU33_02195 87e290ff2067456ee1c1d2257c5fbcc0 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.4E-160 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DDU33_02195 87e290ff2067456ee1c1d2257c5fbcc0 379 Pfam PF02595 Glycerate kinase family 3 374 3.0E-147 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DDU33_02195 87e290ff2067456ee1c1d2257c5fbcc0 379 PIRSF PIRSF006078 1 377 2.7E-138 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DDU33_02195 87e290ff2067456ee1c1d2257c5fbcc0 379 Gene3D G3DSA:3.40.50.10350 1 362 4.2E-139 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold DDU33_10045 bc70c61053c6a1b391ce651b67525158 253 Gene3D G3DSA:3.40.50.1580 2 253 9.0E-81 T 14-10-2018 DDU33_10045 bc70c61053c6a1b391ce651b67525158 253 SUPERFAMILY SSF53167 5 247 3.8E-70 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DDU33_10045 bc70c61053c6a1b391ce651b67525158 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDU33_10045 bc70c61053c6a1b391ce651b67525158 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 250 9.6E-108 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 DDU33_10045 bc70c61053c6a1b391ce651b67525158 253 Pfam PF01048 Phosphorylase superfamily 18 246 4.1E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 SUPERFAMILY SSF55920 168 426 3.01E-78 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 Pfam PF00557 Metallopeptidase family M24 174 404 4.8E-57 T 14-10-2018 IPR000994 Peptidase M24 DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 Gene3D G3DSA:3.40.350.10 10 164 7.2E-44 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 Gene3D G3DSA:3.90.230.10 165 427 1.0E-95 T 14-10-2018 DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 SMART SM01011 9 143 1.9E-57 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 Pfam PF05195 Aminopeptidase P, N-terminal domain 14 127 4.0E-34 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 SUPERFAMILY SSF53092 10 167 1.03E-45 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DDU33_08645 c147ba79a5fec7a5ae4289d701e28596 427 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 341 353 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DDU33_00290 b2140bce095e65ff2724adeb9601a743 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.8E-75 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DDU33_00290 b2140bce095e65ff2724adeb9601a743 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.971 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DDU33_00290 b2140bce095e65ff2724adeb9601a743 257 SUPERFAMILY SSF51366 1 256 1.26E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_00290 b2140bce095e65ff2724adeb9601a743 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 7.6E-117 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DDU33_00290 b2140bce095e65ff2724adeb9601a743 257 Gene3D G3DSA:3.20.20.70 1 257 1.4E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_05320 4f4c010c4345fcff159785ae45560615 529 Gene3D G3DSA:3.10.105.10 286 504 2.1E-182 T 14-10-2018 DDU33_05320 4f4c010c4345fcff159785ae45560615 529 SUPERFAMILY SSF53850 24 527 7.6E-157 T 14-10-2018 DDU33_05320 4f4c010c4345fcff159785ae45560615 529 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DDU33_05320 4f4c010c4345fcff159785ae45560615 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 445 9.7E-106 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DDU33_05320 4f4c010c4345fcff159785ae45560615 529 PIRSF PIRSF002741 14 527 1.3E-123 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDU33_05320 4f4c010c4345fcff159785ae45560615 529 Gene3D G3DSA:3.90.76.10 50 204 2.1E-182 T 14-10-2018 DDU33_05320 4f4c010c4345fcff159785ae45560615 529 Gene3D G3DSA:3.40.190.10 205 517 2.1E-182 T 14-10-2018 DDU33_07400 c53e2f130a132ccb3c76f05aaf7641a3 171 SUPERFAMILY SSF53927 13 167 1.04E-55 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDU33_07400 c53e2f130a132ccb3c76f05aaf7641a3 171 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DDU33_07400 c53e2f130a132ccb3c76f05aaf7641a3 171 Gene3D G3DSA:3.40.140.10 6 171 3.7E-60 T 14-10-2018 DDU33_07400 c53e2f130a132ccb3c76f05aaf7641a3 171 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 116 2.6E-28 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DDU33_07400 c53e2f130a132ccb3c76f05aaf7641a3 171 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 22 164 47.522 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 Pfam PF00270 DEAD/DEAH box helicase 220 367 1.6E-13 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 SMART SM00490 493 590 7.1E-10 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 SMART SM00487 197 391 2.9E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 Gene3D G3DSA:1.10.8.630 2 111 1.6E-37 T 14-10-2018 DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 735 25.044 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 TIGRFAM TIGR00595 priA: primosomal protein N' 222 733 2.6E-192 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 SUPERFAMILY SSF52540 217 601 2.31E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 Gene3D G3DSA:3.40.50.300 186 380 9.0E-73 T 14-10-2018 DDU33_05855 24c8f17d1ab91a003ab6feefbdd85743 736 Pfam PF00271 Helicase conserved C-terminal domain 495 589 3.6E-7 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_00770 283556662778a950659ca0f3b0157a2a 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 56 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_00770 283556662778a950659ca0f3b0157a2a 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 64 87 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_00770 283556662778a950659ca0f3b0157a2a 222 SUPERFAMILY SSF46689 32 100 7.7E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_00770 283556662778a950659ca0f3b0157a2a 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 89 3.4E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_00770 283556662778a950659ca0f3b0157a2a 222 Gene3D G3DSA:1.10.357.10 29 219 8.4E-26 T 14-10-2018 DDU33_00770 283556662778a950659ca0f3b0157a2a 222 ProSitePatterns PS01081 TetR-type HTH domain signature. 55 86 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 393 66.945 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 Gene3D G3DSA:3.90.1150.10 11 381 1.7E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 SUPERFAMILY SSF53383 14 392 9.71E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 Gene3D G3DSA:3.40.640.10 57 304 1.7E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 PIRSF PIRSF000521 160 393 5.7E-34 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 PIRSF PIRSF000521 2 170 1.9E-9 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 Pfam PF00202 Aminotransferase class-III 15 390 4.4E-111 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_05960 e8fa61b4065203a35e4b68da6026f2a4 393 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 390 1.6E-137 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DDU33_10275 bfad69af767e7e2759fa585fa9871ebf 90 SUPERFAMILY SSF55729 4 86 3.24E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_10275 bfad69af767e7e2759fa585fa9871ebf 90 Pfam PF14542 GCN5-related N-acetyl-transferase 12 85 6.1E-20 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase DDU33_10275 bfad69af767e7e2759fa585fa9871ebf 90 Gene3D G3DSA:3.40.630.30 1 90 8.0E-21 T 14-10-2018 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 SUPERFAMILY SSF118215 14 397 1.83E-91 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 PRINTS PR00173 Glutamate-aspartate symporter signature 321 340 1.0E-13 T 14-10-2018 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.0E-13 T 14-10-2018 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 1.0E-13 T 14-10-2018 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 PRINTS PR00173 Glutamate-aspartate symporter signature 286 312 1.0E-13 T 14-10-2018 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 PRINTS PR00173 Glutamate-aspartate symporter signature 348 368 1.0E-13 T 14-10-2018 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 2 403 34.966 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 Pfam PF00375 Sodium:dicarboxylate symporter family 14 396 1.1E-64 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDU33_07225 7cdf063dd378ed569094d74bbee30d4a 404 Gene3D G3DSA:1.10.3860.10 5 402 7.6E-70 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DDU33_10640 2cdeab09b75be341e605b6123abfee1a 253 Gene3D G3DSA:3.90.79.10 122 252 5.2E-37 T 14-10-2018 DDU33_10640 2cdeab09b75be341e605b6123abfee1a 253 SUPERFAMILY SSF55811 74 231 9.34E-38 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_10640 2cdeab09b75be341e605b6123abfee1a 253 SUPERFAMILY SSF55811 3 92 1.91E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_10640 2cdeab09b75be341e605b6123abfee1a 253 Gene3D G3DSA:3.90.79.20 1 121 2.9E-31 T 14-10-2018 DDU33_10640 2cdeab09b75be341e605b6123abfee1a 253 ProSitePatterns PS00893 Nudix box signature. 155 176 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DDU33_10640 2cdeab09b75be341e605b6123abfee1a 253 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 90 120 1.8E-12 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DDU33_10640 2cdeab09b75be341e605b6123abfee1a 253 Pfam PF00293 NUDIX domain 127 227 6.5E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDU33_08980 1f04a3782f0d1b9247ec717e7f624fe4 94 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 93 1.2E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DDU33_08980 1f04a3782f0d1b9247ec717e7f624fe4 94 SUPERFAMILY SSF69754 1 93 3.01E-28 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DDU33_08980 1f04a3782f0d1b9247ec717e7f624fe4 94 Gene3D G3DSA:3.30.160.100 1 94 4.4E-32 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DDU33_08980 1f04a3782f0d1b9247ec717e7f624fe4 94 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.9E-20 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 96 119 8.8E-55 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 184 198 8.8E-55 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 76 95 8.8E-55 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 22 45 8.8E-55 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 131 150 8.8E-55 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 Gene3D G3DSA:1.10.357.10 68 204 1.6E-38 T 14-10-2018 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 SUPERFAMILY SSF48498 70 205 2.22E-38 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DDU33_00780 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 5.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 5.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 70 202 2.8E-37 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDU33_00780 bf4765b683c552d5771dd18141372b90 208 SUPERFAMILY SSF46689 6 68 2.69E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_00780 bf4765b683c552d5771dd18141372b90 208 Gene3D G3DSA:1.10.10.60 2 67 1.9E-30 T 14-10-2018 DDU33_07740 e36cd966d73f23f0a46088dddefa4e0c 202 SUPERFAMILY SSF52141 12 194 2.53E-27 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_07740 e36cd966d73f23f0a46088dddefa4e0c 202 Gene3D G3DSA:3.40.470.10 8 199 1.4E-16 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_09240 f189cdfc195d59e712f325eb4bce9325 210 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.899 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DDU33_09240 f189cdfc195d59e712f325eb4bce9325 210 SUPERFAMILY SSF52540 1 188 6.68E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09240 f189cdfc195d59e712f325eb4bce9325 210 Gene3D G3DSA:3.40.50.300 1 210 4.6E-69 T 14-10-2018 DDU33_09240 f189cdfc195d59e712f325eb4bce9325 210 Pfam PF01121 Dephospho-CoA kinase 3 176 8.5E-70 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DDU33_09240 f189cdfc195d59e712f325eb4bce9325 210 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 2.3E-66 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DDU33_09025 fbe6f48b64d7defdae54c88c65a05b66 380 SUPERFAMILY SSF51713 1 368 6.93E-161 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDU33_09025 fbe6f48b64d7defdae54c88c65a05b66 380 Gene3D G3DSA:3.20.20.105 1 372 4.4E-169 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDU33_09025 fbe6f48b64d7defdae54c88c65a05b66 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 368 55.981 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDU33_09025 fbe6f48b64d7defdae54c88c65a05b66 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 373 6.9E-187 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDU33_09025 fbe6f48b64d7defdae54c88c65a05b66 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 365 4.1E-94 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDU33_09025 fbe6f48b64d7defdae54c88c65a05b66 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 373 1.7E-175 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 SUPERFAMILY SSF116726 198 270 2.09E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 550 57.23 T 14-10-2018 IPR023018 Transport protein YidE, putative DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 SUPERFAMILY SSF116726 285 357 1.44E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 Gene3D G3DSA:3.30.70.1450 277 356 1.8E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 Gene3D G3DSA:3.30.70.1450 194 271 1.5E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 Pfam PF02080 TrkA-C domain 289 357 1.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 Pfam PF02080 TrkA-C domain 208 271 2.0E-6 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 Pfam PF06826 Predicted Permease Membrane Region 371 543 3.3E-46 T 14-10-2018 IPR006512 YidE/YbjL duplication DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 Pfam PF06826 Predicted Permease Membrane Region 11 176 4.4E-42 T 14-10-2018 IPR006512 YidE/YbjL duplication DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 376 530 4.8E-46 T 14-10-2018 IPR006512 YidE/YbjL duplication DDU33_05825 d0f87667050bcc40b2de34a850e39533 550 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 163 1.3E-35 T 14-10-2018 IPR006512 YidE/YbjL duplication DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 3.6E-158 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 49.012 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 Gene3D G3DSA:3.40.640.10 17 252 2.3E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 Gene3D G3DSA:3.90.1150.10 253 362 9.1E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 SUPERFAMILY SSF53383 3 360 2.6E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 Pfam PF00266 Aminotransferase class-V 4 350 5.9E-69 T 14-10-2018 IPR000192 Aminotransferase class V domain DDU33_07730 10275983e71533c30e9252b0aa0c9d3a 362 PIRSF PIRSF000525 1 362 1.8E-147 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 SMART SM01387 8 88 1.2E-49 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 Gene3D G3DSA:1.10.287.10 2 89 1.8E-36 T 14-10-2018 DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 5.0E-30 T 14-10-2018 DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 5.0E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 SUPERFAMILY SSF47060 3 89 1.91E-33 T 14-10-2018 IPR009068 S15/NS1, RNA-binding DDU33_09715 efdecf61172789a1191e7a46c57c028b 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.867 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 SMART SM00490 505 589 3.9E-21 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 Gene3D G3DSA:2.40.50.140 47 141 2.3E-14 T 14-10-2018 DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 SUPERFAMILY SSF52540 196 453 2.57E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 Pfam PF17191 RecG wedge domain 15 172 1.6E-26 T 14-10-2018 IPR033454 RecG, wedge domain DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 SUPERFAMILY SSF52540 292 653 9.49E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 Gene3D G3DSA:3.40.50.300 210 450 4.0E-84 T 14-10-2018 DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 3.2E-248 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 SUPERFAMILY SSF50249 8 174 3.43E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 Gene3D G3DSA:3.40.50.300 457 630 1.7E-51 T 14-10-2018 DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 SMART SM00487 265 459 1.3E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 Pfam PF00270 DEAD/DEAH box helicase 292 407 1.3E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_02185 1621e88f3bff459e8a6663a23ed18cf9 693 Pfam PF00271 Helicase conserved C-terminal domain 475 588 5.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_00850 d6b88a3c445e8ebe6b0dfa729bce0852 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 266 3.1E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_00850 d6b88a3c445e8ebe6b0dfa729bce0852 528 Gene3D G3DSA:1.10.3720.10 7 268 2.1E-31 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_00850 d6b88a3c445e8ebe6b0dfa729bce0852 528 Gene3D G3DSA:1.10.3720.10 284 528 1.2E-18 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_00850 d6b88a3c445e8ebe6b0dfa729bce0852 528 SUPERFAMILY SSF161098 14 259 1.23E-33 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_00850 d6b88a3c445e8ebe6b0dfa729bce0852 528 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 20 521 8.4E-123 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 DDU33_00850 d6b88a3c445e8ebe6b0dfa729bce0852 528 SUPERFAMILY SSF161098 288 525 1.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_03055 c214239a4eb0664c92db877365e259b8 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 135 4.4E-46 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DDU33_03055 c214239a4eb0664c92db877365e259b8 143 Gene3D G3DSA:2.20.25.10 1 41 5.8E-8 T 14-10-2018 DDU33_03055 c214239a4eb0664c92db877365e259b8 143 Pfam PF02566 OsmC-like protein 39 133 6.1E-17 T 14-10-2018 IPR003718 OsmC/Ohr family DDU33_03055 c214239a4eb0664c92db877365e259b8 143 SUPERFAMILY SSF82784 1 136 1.44E-36 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DDU33_03055 c214239a4eb0664c92db877365e259b8 143 Gene3D G3DSA:3.30.300.20 43 139 8.5E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_09360 22cebc5520b3d2c87722bede032019cb 113 Gene3D G3DSA:1.10.260.40 12 113 8.3E-18 T 14-10-2018 DDU33_09360 22cebc5520b3d2c87722bede032019cb 113 SMART SM00530 16 71 1.7E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_09360 22cebc5520b3d2c87722bede032019cb 113 SUPERFAMILY SSF47413 10 77 5.36E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_09360 22cebc5520b3d2c87722bede032019cb 113 Pfam PF01381 Helix-turn-helix 17 71 9.4E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_08895 114aca90b84891781adb289ad740f729 219 TIGRFAM TIGR00235 udk: uridine kinase 8 216 1.4E-90 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 DDU33_08895 114aca90b84891781adb289ad740f729 219 PRINTS PR00988 Uridine kinase signature 147 157 6.0E-37 T 14-10-2018 DDU33_08895 114aca90b84891781adb289ad740f729 219 PRINTS PR00988 Uridine kinase signature 91 106 6.0E-37 T 14-10-2018 DDU33_08895 114aca90b84891781adb289ad740f729 219 PRINTS PR00988 Uridine kinase signature 12 29 6.0E-37 T 14-10-2018 DDU33_08895 114aca90b84891781adb289ad740f729 219 PRINTS PR00988 Uridine kinase signature 161 172 6.0E-37 T 14-10-2018 DDU33_08895 114aca90b84891781adb289ad740f729 219 PRINTS PR00988 Uridine kinase signature 46 57 6.0E-37 T 14-10-2018 DDU33_08895 114aca90b84891781adb289ad740f729 219 PRINTS PR00988 Uridine kinase signature 183 196 6.0E-37 T 14-10-2018 DDU33_08895 114aca90b84891781adb289ad740f729 219 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 14 203 6.7E-45 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DDU33_08895 114aca90b84891781adb289ad740f729 219 SUPERFAMILY SSF52540 13 209 2.27E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08895 114aca90b84891781adb289ad740f729 219 Hamap MF_00551 Uridine kinase [udk]. 9 217 39.07 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 DDU33_08895 114aca90b84891781adb289ad740f729 219 Gene3D G3DSA:3.40.50.300 8 219 4.9E-62 T 14-10-2018 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 SUPERFAMILY SSF54919 1 137 1.7E-53 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 SMART SM00562 2 138 1.1E-72 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 Pfam PF00334 Nucleoside diphosphate kinase 3 137 1.7E-52 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 Gene3D G3DSA:3.30.70.141 1 138 7.7E-55 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 137 31.59 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 4.2E-32 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 4.2E-32 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 4.2E-32 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 4.2E-32 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_06775 0d060248faf3c05a5b421551252f3d07 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 4.2E-32 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DDU33_01140 20e2029c55e71e8b74ac11b29a79df91 444 Gene3D G3DSA:1.20.1250.20 240 444 5.0E-54 T 14-10-2018 DDU33_01140 20e2029c55e71e8b74ac11b29a79df91 444 Pfam PF07690 Major Facilitator Superfamily 34 398 5.1E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_01140 20e2029c55e71e8b74ac11b29a79df91 444 SUPERFAMILY SSF103473 14 440 3.53E-80 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_01140 20e2029c55e71e8b74ac11b29a79df91 444 Gene3D G3DSA:1.20.1250.20 19 227 1.3E-54 T 14-10-2018 DDU33_01140 20e2029c55e71e8b74ac11b29a79df91 444 PIRSF PIRSF002808 6 444 3.3E-152 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DDU33_01140 20e2029c55e71e8b74ac11b29a79df91 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 5.6E-142 T 14-10-2018 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 Gene3D G3DSA:3.40.50.720 3 94 2.0E-24 T 14-10-2018 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 SUPERFAMILY SSF51984 4 95 4.84E-22 T 14-10-2018 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 366 1.8E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 Pfam PF08245 Mur ligase middle domain 111 276 7.9E-25 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 432 33.831 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 SUPERFAMILY SSF53623 96 293 1.57E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 Gene3D G3DSA:3.40.1190.10 95 295 1.1E-66 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 Gene3D G3DSA:3.90.190.20 296 429 3.0E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 430 8.7E-132 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01275 a59fcfa4753a5416d440abc66c8c2dc5 434 SUPERFAMILY SSF53244 295 430 5.04E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_02785 41ae3a84be2453f6e080a1efb5b56f99 263 SUPERFAMILY SSF53213 4 259 2.22E-83 T 14-10-2018 DDU33_02785 41ae3a84be2453f6e080a1efb5b56f99 263 PIRSF PIRSF006157 1 262 1.4E-86 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 DDU33_02785 41ae3a84be2453f6e080a1efb5b56f99 263 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 206 5.4E-27 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DDU33_02785 41ae3a84be2453f6e080a1efb5b56f99 263 Gene3D G3DSA:3.40.830.10 1 261 4.5E-83 T 14-10-2018 DDU33_08255 d8dd69b093a6e19852bf89a0cc6bf18d 276 Gene3D G3DSA:1.10.3470.10 42 271 1.6E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_08255 d8dd69b093a6e19852bf89a0cc6bf18d 276 SUPERFAMILY SSF81345 6 266 4.32E-41 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_08255 d8dd69b093a6e19852bf89a0cc6bf18d 276 Pfam PF00950 ABC 3 transport family 14 268 7.5E-90 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Gene3D G3DSA:2.120.10.90 501 745 6.9E-17 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 SUPERFAMILY SSF101904 498 738 6.67E-49 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Gene3D G3DSA:3.30.1360.40 239 332 3.1E-174 T 14-10-2018 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 11 743 0.0 T 14-10-2018 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 SMART SM00434 14 462 7.8E-222 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 7 744 32.844 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Gene3D G3DSA:1.10.268.10 370 455 3.1E-174 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 469 1.7E-132 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 638 0.0016 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 680 3.6E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 Gene3D G3DSA:3.90.199.10 35 482 3.1E-174 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DDU33_07420 a093db72d691e7851a88bcc283aa056d 747 SUPERFAMILY SSF56719 34 484 1.23E-150 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDU33_01785 7fad40d2d08038ceea40f3021415d39a 266 Pfam PF01263 Aldose 1-epimerase 20 263 1.4E-39 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DDU33_01785 7fad40d2d08038ceea40f3021415d39a 266 PIRSF PIRSF016020 2 261 1.1E-39 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 DDU33_01785 7fad40d2d08038ceea40f3021415d39a 266 SUPERFAMILY SSF74650 7 263 6.09E-74 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DDU33_01785 7fad40d2d08038ceea40f3021415d39a 266 Gene3D G3DSA:2.70.98.10 3 265 1.0E-76 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDU33_09225 73d072af383baa9b2d766b250f3c8091 209 Pfam PF12327 FtsZ family, C-terminal domain 126 208 5.3E-8 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DDU33_09225 73d072af383baa9b2d766b250f3c8091 209 SUPERFAMILY SSF55307 101 207 1.6E-8 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DDU33_09225 73d072af383baa9b2d766b250f3c8091 209 Gene3D G3DSA:3.40.50.1440 20 209 9.5E-16 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 Gene3D G3DSA:4.10.520.10 1 90 6.8E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 SMART SM00411 1 90 2.3E-47 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.6E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_10500 4914562b93e63d00e8346bb92b95ccbb 90 SUPERFAMILY SSF47729 1 90 7.95E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 SMART SM00971 9 113 5.6E-62 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 SUPERFAMILY SSF51161 7 260 3.47E-65 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 8.6E-40 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 Gene3D G3DSA:1.10.3130.10 1 142 1.4E-54 T 14-10-2018 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 4.3E-75 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.1E-9 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 PIRSF PIRSF000441 7 62 200.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 PIRSF PIRSF000441 75 266 5.5E-61 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DDU33_01735 cce8c767f9092a27b4b51e2a8ae80592 271 Gene3D G3DSA:2.160.10.10 143 270 7.1E-39 T 14-10-2018 DDU33_02305 25029e9eba1d5452f30115f126944b5d 209 SUPERFAMILY SSF54534 12 208 1.12E-59 T 14-10-2018 DDU33_02305 25029e9eba1d5452f30115f126944b5d 209 Gene3D G3DSA:1.10.287.460 9 71 4.7E-17 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 DDU33_02305 25029e9eba1d5452f30115f126944b5d 209 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 119 206 2.2E-29 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDU33_02305 25029e9eba1d5452f30115f126944b5d 209 Gene3D G3DSA:3.10.50.40 72 209 5.4E-55 T 14-10-2018 DDU33_02305 25029e9eba1d5452f30115f126944b5d 209 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 7 111 3.8E-23 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DDU33_07910 266aa4964904aca3541b0d53d5d7913e 103 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 20 103 2.0E-26 T 14-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 DDU33_07910 266aa4964904aca3541b0d53d5d7913e 103 Pfam PF10963 Phage tail assembly chaperone 22 103 1.3E-27 T 14-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 DDU33_04845 f30368cf641f0005a3ff7524bff5c0ca 246 SUPERFAMILY SSF75625 3 243 3.66E-95 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDU33_04845 f30368cf641f0005a3ff7524bff5c0ca 246 Gene3D G3DSA:1.10.10.200 1 81 1.9E-34 T 14-10-2018 IPR017856 Integrase-like, N-terminal DDU33_04845 f30368cf641f0005a3ff7524bff5c0ca 246 Gene3D G3DSA:3.30.70.980 86 235 7.3E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDU33_04845 f30368cf641f0005a3ff7524bff5c0ca 246 Pfam PF01709 Transcriptional regulator 5 235 3.1E-91 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDU33_04845 f30368cf641f0005a3ff7524bff5c0ca 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 35.581 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDU33_04845 f30368cf641f0005a3ff7524bff5c0ca 246 Gene3D G3DSA:3.30.70.980 130 204 7.3E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDU33_04845 f30368cf641f0005a3ff7524bff5c0ca 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.8E-105 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DDU33_07265 8e21be0ead6bd8af56b872ba95a8b852 388 SUPERFAMILY SSF111369 51 308 4.18E-24 T 14-10-2018 DDU33_07265 8e21be0ead6bd8af56b872ba95a8b852 388 Gene3D G3DSA:2.40.420.20 44 370 5.0E-97 T 14-10-2018 DDU33_07265 8e21be0ead6bd8af56b872ba95a8b852 388 Gene3D G3DSA:2.40.50.100 59 221 5.0E-97 T 14-10-2018 DDU33_07265 8e21be0ead6bd8af56b872ba95a8b852 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 371 2.1E-56 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDU33_07265 8e21be0ead6bd8af56b872ba95a8b852 388 Gene3D G3DSA:2.40.30.170 48 311 5.0E-97 T 14-10-2018 DDU33_07265 8e21be0ead6bd8af56b872ba95a8b852 388 Gene3D G3DSA:1.10.287.470 93 184 5.0E-97 T 14-10-2018 DDU33_07265 8e21be0ead6bd8af56b872ba95a8b852 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 268 1.6E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDU33_01175 a3e4f1fad1889afc7141bd6d64c9a726 175 PIRSF PIRSF004633 1 175 2.5E-74 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain DDU33_01175 a3e4f1fad1889afc7141bd6d64c9a726 175 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 104 6.5E-15 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDU33_01175 a3e4f1fad1889afc7141bd6d64c9a726 175 Gene3D G3DSA:2.30.110.10 11 175 7.2E-52 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DDU33_01175 a3e4f1fad1889afc7141bd6d64c9a726 175 SUPERFAMILY SSF50475 11 162 6.29E-34 T 14-10-2018 DDU33_01175 a3e4f1fad1889afc7141bd6d64c9a726 175 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 5 171 4.4E-84 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain DDU33_09620 595a2d5fed2bc9fcfe4bc35c2260887a 130 SUPERFAMILY SSF81273 93 130 1.96E-8 T 14-10-2018 DDU33_09620 595a2d5fed2bc9fcfe4bc35c2260887a 130 Gene3D G3DSA:1.10.287.1050 1 82 9.0E-25 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 DDU33_09620 595a2d5fed2bc9fcfe4bc35c2260887a 130 Pfam PF00816 H-NS histone family 33 120 1.1E-15 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 DDU33_09620 595a2d5fed2bc9fcfe4bc35c2260887a 130 Gene3D G3DSA:4.10.430.10 92 130 4.5E-15 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 DDU33_09620 595a2d5fed2bc9fcfe4bc35c2260887a 130 PIRSF PIRSF002096 1 130 1.1E-41 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 DDU33_09620 595a2d5fed2bc9fcfe4bc35c2260887a 130 SUPERFAMILY SSF81273 2 54 1.61E-14 T 14-10-2018 DDU33_09620 595a2d5fed2bc9fcfe4bc35c2260887a 130 SMART SM00528 88 130 2.1E-12 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 150 206 2.9E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 Gene3D G3DSA:3.40.50.620 147 322 2.2E-16 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 10 329 8.6E-91 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 110 329 1.0E-90 T 14-10-2018 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 PIRSF PIRSF005751 1 347 7.4E-132 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 Pfam PF00583 Acetyltransferase (GNAT) family 27 97 1.4E-4 T 14-10-2018 IPR000182 GNAT domain DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 Gene3D G3DSA:3.40.630.30 5 128 1.6E-7 T 14-10-2018 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 SUPERFAMILY SSF55729 29 117 1.57E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 Pfam PF08218 Citrate lyase ligase C-terminal domain 149 329 8.7E-79 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 SMART SM00764 149 329 2.7E-114 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 DDU33_03670 5f4e5fa839ac972ed69d394b00073bfe 350 SUPERFAMILY SSF52374 148 329 4.74E-21 T 14-10-2018 DDU33_07140 f934ce2b6936184007523937f84b83db 334 PIRSF PIRSF006280 2 333 8.3E-120 T 14-10-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 DDU33_07140 f934ce2b6936184007523937f84b83db 334 Pfam PF00588 SpoU rRNA Methylase family 189 325 6.9E-17 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDU33_07140 f934ce2b6936184007523937f84b83db 334 SUPERFAMILY SSF55315 89 169 7.42E-11 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DDU33_07140 f934ce2b6936184007523937f84b83db 334 Gene3D G3DSA:3.40.1280.10 168 333 3.5E-23 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDU33_07140 f934ce2b6936184007523937f84b83db 334 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 100 171 1.2E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDU33_07140 f934ce2b6936184007523937f84b83db 334 SMART SM00967 99 174 1.4E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DDU33_07140 f934ce2b6936184007523937f84b83db 334 SUPERFAMILY SSF75217 164 330 1.18E-21 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 SUPERFAMILY SSF54368 8 108 2.62E-30 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 Gene3D G3DSA:3.30.590.10 112 464 3.1E-149 T 14-10-2018 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 Pfam PF00120 Glutamine synthetase, catalytic domain 110 473 2.8E-137 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 266 281 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 393 405 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 102 9.6E-26 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 474 8.7E-212 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 SUPERFAMILY SSF55931 109 474 1.37E-136 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 ProSitePatterns PS00180 Glutamine synthetase signature 1. 57 75 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 Gene3D G3DSA:3.10.20.70 7 111 3.3E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDU33_03990 c82b54a449bcacad53c48760f4dfec59 475 SMART SM01230 109 386 4.4E-147 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DDU33_04920 4f3704943be577e212dec49a30d45462 200 SUPERFAMILY SSF53335 15 189 3.52E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_04920 4f3704943be577e212dec49a30d45462 200 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 9 193 2.1E-64 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DDU33_04920 4f3704943be577e212dec49a30d45462 200 Pfam PF03602 Conserved hypothetical protein 95 15 192 1.2E-61 T 14-10-2018 DDU33_04920 4f3704943be577e212dec49a30d45462 200 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 129 135 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_04920 4f3704943be577e212dec49a30d45462 200 PIRSF PIRSF004553 14 196 1.1E-54 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DDU33_04920 4f3704943be577e212dec49a30d45462 200 Gene3D G3DSA:3.40.50.150 3 195 1.5E-59 T 14-10-2018 DDU33_00860 e96ad62563c73c59e02a32cf881b9448 473 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 464 1.6E-183 T 14-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 DDU33_00860 e96ad62563c73c59e02a32cf881b9448 473 SUPERFAMILY SSF55604 6 82 1.18E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DDU33_00860 e96ad62563c73c59e02a32cf881b9448 473 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDU33_00860 e96ad62563c73c59e02a32cf881b9448 473 Pfam PF02378 Phosphotransferase system, EIIC 111 410 5.0E-48 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDU33_00860 e96ad62563c73c59e02a32cf881b9448 473 Gene3D G3DSA:3.30.1360.60 1 78 1.1E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DDU33_00860 e96ad62563c73c59e02a32cf881b9448 473 Pfam PF00367 phosphotransferase system, EIIB 11 41 5.8E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDU33_00860 e96ad62563c73c59e02a32cf881b9448 473 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 32 110 4.9E-17 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 Gene3D G3DSA:3.30.160.270 396 504 2.0E-12 T 14-10-2018 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 512 42.113 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 Gene3D G3DSA:3.20.20.70 2 279 2.7E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 SUPERFAMILY SSF110921 408 502 4.32E-22 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 Gene3D G3DSA:1.10.238.260 282 395 7.0E-32 T 14-10-2018 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 502 1.8E-29 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 200 213 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 SUPERFAMILY SSF51569 3 293 9.89E-99 T 14-10-2018 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 Pfam PF00682 HMGL-like 6 275 6.7E-103 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 SMART SM00917 371 503 6.1E-33 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDU33_07255 c25141eb1a5dec655582900194a5aafd 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 500 8.2E-245 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 SMART SM00640 38 438 1.1E-90 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 Gene3D G3DSA:2.60.120.560 357 472 3.9E-7 T 14-10-2018 DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 SUPERFAMILY SSF49899 355 455 8.7E-19 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 Gene3D G3DSA:2.115.10.20 4 350 2.2E-76 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 25 448 1.6E-113 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 SUPERFAMILY SSF75005 30 338 3.3E-80 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 361 455 5.4E-12 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DDU33_04480 bdeccccbc9596284e7480e857c1f2a3b 473 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 38 337 1.1E-79 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 Gene3D G3DSA:1.10.1140.10 342 457 9.5E-59 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 457 56.932 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 1.0E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 457 4.7E-259 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 330 339 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 339 4.3E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 Gene3D G3DSA:3.40.50.300 73 341 8.3E-114 T 14-10-2018 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 SUPERFAMILY SSF50615 1 72 2.07E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 SUPERFAMILY SSF47917 342 456 1.94E-54 T 14-10-2018 DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 SMART SM00382 139 324 0.0021 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 SUPERFAMILY SSF52540 74 345 2.59E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03210 d569585a6c546679ebef69aa98ed569c 457 Gene3D G3DSA:2.40.10.170 1 72 5.7E-27 T 14-10-2018 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 73 86 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 SUPERFAMILY SSF55120 3 332 2.73E-95 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 8 333 3.3E-75 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 Gene3D G3DSA:3.30.2340.10 163 295 2.3E-105 T 14-10-2018 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 183 330 1.8E-17 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 164 1.1E-39 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 335 27.301 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_01055 46fa61671ea3a079f5633e48c63e3e96 337 Gene3D G3DSA:3.30.2350.20 14 330 2.3E-105 T 14-10-2018 DDU33_07725 a9f3d3e9c763faa00d69dc0b98957479 299 Gene3D G3DSA:1.10.10.10 2 84 2.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_07725 a9f3d3e9c763faa00d69dc0b98957479 299 SUPERFAMILY SSF46689 6 80 2.96E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_07725 a9f3d3e9c763faa00d69dc0b98957479 299 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 80 5.5E-23 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DDU33_07725 a9f3d3e9c763faa00d69dc0b98957479 299 SUPERFAMILY SSF53697 105 276 7.86E-43 T 14-10-2018 DDU33_07725 a9f3d3e9c763faa00d69dc0b98957479 299 Pfam PF01380 SIS domain 133 258 7.3E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDU33_07725 a9f3d3e9c763faa00d69dc0b98957479 299 Gene3D G3DSA:3.40.50.10490 103 283 1.1E-47 T 14-10-2018 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 Gene3D G3DSA:3.30.70.660 105 242 3.2E-49 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.3E-78 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 SUPERFAMILY SSF55120 1 252 3.16E-94 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 Pfam PF01416 tRNA pseudouridine synthase 144 244 3.4E-30 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.1E-9 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.169 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 PIRSF PIRSF001430 1 256 8.0E-79 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_08985 c55e8cb8c226e6824233404b25fd9fdb 262 Gene3D G3DSA:3.30.70.580 1 104 1.3E-38 T 14-10-2018 DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 SUPERFAMILY SSF46894 139 239 6.24E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 Pfam PF00072 Response regulator receiver domain 4 113 2.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 SMART SM00448 2 112 2.8E-46 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 8.4E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 SUPERFAMILY SSF52172 1 125 6.97E-43 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 SMART SM00862 162 238 1.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 Gene3D G3DSA:3.40.50.12740 2 144 6.2E-44 T 14-10-2018 DDU33_08425 10d2a585dd6a1065e408d3b879de6708 242 Gene3D G3DSA:1.10.10.10 145 241 1.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 Gene3D G3DSA:3.20.20.220 138 517 1.1E-136 T 14-10-2018 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 68 179 2.1E-45 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 SUPERFAMILY SSF51730 182 525 9.81E-116 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 Gene3D G3DSA:3.40.605.10 540 1010 3.3E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 PIRSF PIRSF000197 2 1201 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 Gene3D G3DSA:3.40.309.10 788 981 3.3E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 SUPERFAMILY SSF53720 563 1011 4.45E-121 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 517 1010 1.2E-214 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 SUPERFAMILY SSF81935 13 181 1.1E-61 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 813 824 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 Gene3D G3DSA:3.20.20.220 13 112 6.7E-7 T 14-10-2018 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 Pfam PF00171 Aldehyde dehydrogenase family 567 1008 2.3E-113 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DDU33_04130 944a0245f61f1cabd6bb051c337f4e3e 1202 Pfam PF01619 Proline dehydrogenase 190 482 1.4E-94 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DDU33_05000 f336f6f1515733031e266a1c5e1d6f4f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-37 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DDU33_05000 f336f6f1515733031e266a1c5e1d6f4f 72 SMART SM00316 4 72 5.6E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_05000 f336f6f1515733031e266a1c5e1d6f4f 72 Gene3D G3DSA:2.40.50.140 1 72 8.8E-37 T 14-10-2018 DDU33_05000 f336f6f1515733031e266a1c5e1d6f4f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.635 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DDU33_05000 f336f6f1515733031e266a1c5e1d6f4f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.4E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DDU33_05000 f336f6f1515733031e266a1c5e1d6f4f 72 SUPERFAMILY SSF50249 1 70 2.94E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Pfam PF00675 Insulinase (Peptidase family M16) 77 209 1.1E-32 T 14-10-2018 IPR011765 Peptidase M16, N-terminal DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Gene3D G3DSA:3.30.830.10 47 293 5.3E-76 T 14-10-2018 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Gene3D G3DSA:3.30.830.10 294 525 1.0E-52 T 14-10-2018 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Gene3D G3DSA:3.30.830.10 675 942 4.7E-92 T 14-10-2018 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Gene3D G3DSA:3.30.830.10 527 910 4.7E-92 T 14-10-2018 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Pfam PF16187 Middle or third domain of peptidase_M16 424 698 8.6E-48 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 SUPERFAMILY SSF63411 769 982 2.75E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 SUPERFAMILY SSF63411 527 753 2.55E-33 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Pfam PF05193 Peptidase M16 inactive domain 705 882 6.9E-8 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 Pfam PF05193 Peptidase M16 inactive domain 238 418 2.3E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 97 120 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 SUPERFAMILY SSF63411 54 285 1.35E-49 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_04125 f574bc3b385f0c139af9594c76ed729f 985 SUPERFAMILY SSF63411 287 525 4.3E-57 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 Gene3D G3DSA:3.30.540.10 1 195 2.6E-71 T 14-10-2018 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 4.7E-73 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PIRSF PIRSF000904 1 334 6.7E-121 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 271 283 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 331 40.967 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 Gene3D G3DSA:3.40.190.80 198 334 1.4E-54 T 14-10-2018 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 3.6E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 3.6E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 3.6E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 3.6E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 3.6E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 305 330 3.6E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 PIRSF PIRSF500210 1 334 4.7E-125 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DDU33_05970 47a4c4fa06d969bc73c50451c7068763 334 SUPERFAMILY SSF56655 2 329 1.97E-103 T 14-10-2018 DDU33_06395 8240a526be065cb65f9b8caf7d62ce41 804 SMART SM00563 297 424 1.8E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DDU33_06395 8240a526be065cb65f9b8caf7d62ce41 804 PIRSF PIRSF000437 19 804 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 DDU33_06395 8240a526be065cb65f9b8caf7d62ce41 804 Pfam PF01553 Acyltransferase 279 421 7.3E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DDU33_06395 8240a526be065cb65f9b8caf7d62ce41 804 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 804 31.14 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 DDU33_06395 8240a526be065cb65f9b8caf7d62ce41 804 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 796 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 DDU33_06395 8240a526be065cb65f9b8caf7d62ce41 804 SUPERFAMILY SSF69593 279 480 7.06E-24 T 14-10-2018 DDU33_06395 8240a526be065cb65f9b8caf7d62ce41 804 PIRSF PIRSF500064 2 804 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 4.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 4.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 4.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 4.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 4.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 4.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 8.1E-138 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 PIRSF PIRSF001415 2 336 2.8E-147 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 SUPERFAMILY SSF51569 6 335 6.59E-142 T 14-10-2018 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 SMART SM01004 9 333 7.8E-241 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DDU33_01515 0e8047fffdaca667c62a0fe15e53e66e 339 Gene3D G3DSA:3.20.20.70 2 337 4.0E-145 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_03960 c777450240736fadf3c436a672b7285c 868 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 4 855 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Gene3D G3DSA:1.25.40.310 4 164 9.6E-64 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDU33_03960 c777450240736fadf3c436a672b7285c 868 SUPERFAMILY SSF74778 4 163 3.01E-60 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDU33_03960 c777450240736fadf3c436a672b7285c 868 SUPERFAMILY SSF53732 383 863 4.32E-146 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DDU33_03960 c777450240736fadf3c436a672b7285c 868 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Pfam PF00330 Aconitase family (aconitate hydratase) 474 821 2.2E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Gene3D G3DSA:3.30.499.10 405 532 1.1E-146 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Gene3D G3DSA:3.40.1060.10 388 684 1.1E-146 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DDU33_03960 c777450240736fadf3c436a672b7285c 868 ProSitePatterns PS01244 Aconitase family signature 2. 764 777 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDU33_03960 c777450240736fadf3c436a672b7285c 868 SUPERFAMILY SSF52016 166 375 1.49E-68 T 14-10-2018 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Gene3D G3DSA:3.20.19.10 165 364 4.2E-75 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Pfam PF06434 Aconitate hydratase 2 N-terminus 171 385 1.5E-96 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDU33_03960 c777450240736fadf3c436a672b7285c 868 PIRSF PIRSF036687 2 862 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Gene3D G3DSA:3.30.499.10 686 868 2.6E-69 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DDU33_03960 c777450240736fadf3c436a672b7285c 868 Pfam PF11791 Aconitate B N-terminal domain 7 159 3.6E-60 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 DDU33_00170 85ca353ba16e4f7fb335c684752c83d7 416 Pfam PF12704 MacB-like periplasmic core domain 25 213 9.9E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DDU33_00170 85ca353ba16e4f7fb335c684752c83d7 416 Pfam PF02687 FtsX-like permease family 303 409 2.9E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDU33_00170 85ca353ba16e4f7fb335c684752c83d7 416 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 3 416 8.8E-182 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 DDU33_00170 85ca353ba16e4f7fb335c684752c83d7 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 415 7.8E-147 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Pfam PF03461 TRCF domain 1012 1104 1.3E-26 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SUPERFAMILY SSF52540 15 344 1.35E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Gene3D G3DSA:3.90.1150.50 1007 1151 2.8E-40 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SMART SM00982 1011 1111 1.0E-49 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SUPERFAMILY SSF141259 473 551 3.4E-23 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Pfam PF00271 Helicase conserved C-terminal domain 808 912 2.8E-15 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Pfam PF02559 CarD-like/TRCF domain 483 578 2.7E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Gene3D G3DSA:3.40.50.11140 357 454 3.9E-28 T 14-10-2018 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SUPERFAMILY SSF52540 355 466 1.49E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SUPERFAMILY SSF52540 785 993 3.14E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Gene3D G3DSA:2.30.30.840 486 544 3.3E-235 T 14-10-2018 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Gene3D G3DSA:3.40.50.300 545 784 3.3E-235 T 14-10-2018 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SUPERFAMILY SSF143517 999 1149 5.49E-42 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Gene3D G3DSA:3.40.50.300 481 992 3.3E-235 T 14-10-2018 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SUPERFAMILY SSF52540 526 786 6.58E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SMART SM01058 482 579 2.1E-48 T 14-10-2018 IPR003711 CarD-like/TRCF domain DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Gene3D G3DSA:3.30.2060.10 131 216 7.8E-119 T 14-10-2018 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SMART SM00487 603 793 7.5E-36 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Gene3D G3DSA:3.40.50.11180 27 336 7.8E-119 T 14-10-2018 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 149 1084 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Pfam PF00270 DEAD/DEAH box helicase 608 768 5.0E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1112 27.799 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DDU33_05990 85530f438f597da91957d896901c6c8d 1151 SMART SM00490 829 913 3.0E-16 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_03125 7e91ee9102c8ee298594c8aae97c5642 368 Gene3D G3DSA:3.10.620.30 108 305 6.7E-22 T 14-10-2018 DDU33_03125 7e91ee9102c8ee298594c8aae97c5642 368 Pfam PF01841 Transglutaminase-like superfamily 155 280 8.5E-25 T 14-10-2018 IPR002931 Transglutaminase-like DDU33_03125 7e91ee9102c8ee298594c8aae97c5642 368 SUPERFAMILY SSF54001 130 282 2.29E-23 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DDU33_03125 7e91ee9102c8ee298594c8aae97c5642 368 SMART SM00460 201 283 4.0E-20 T 14-10-2018 IPR002931 Transglutaminase-like DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 Gene3D G3DSA:3.40.50.261 240 388 2.2E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 Pfam PF00549 CoA-ligase 262 378 2.0E-24 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 Pfam PF08442 ATP-grasp domain 2 203 1.1E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.024 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 Gene3D G3DSA:3.30.470.20 1 234 7.9E-91 T 14-10-2018 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.5E-175 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 SUPERFAMILY SSF56059 1 238 5.41E-78 T 14-10-2018 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 Gene3D G3DSA:3.30.1490.20 21 104 7.9E-91 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 SUPERFAMILY SSF52210 239 384 7.72E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDU33_09910 6b25af8ea918986efd1bede7e9a4275d 389 PIRSF PIRSF001554 1 388 1.0E-151 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_03830 118ba0602c0f3bbcb0996b241ed36716 319 Gene3D G3DSA:3.40.50.2000 165 318 1.7E-44 T 14-10-2018 DDU33_03830 118ba0602c0f3bbcb0996b241ed36716 319 SUPERFAMILY SSF53756 1 316 9.73E-71 T 14-10-2018 DDU33_03830 118ba0602c0f3bbcb0996b241ed36716 319 Gene3D G3DSA:3.40.50.2000 1 163 3.7E-66 T 14-10-2018 DDU33_03830 118ba0602c0f3bbcb0996b241ed36716 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 298 6.1E-66 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DDU33_03830 118ba0602c0f3bbcb0996b241ed36716 319 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 316 9.9E-129 T 14-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 DDU33_04895 defae782e83b8e1076d996737fe9ff0a 225 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 225 3.3E-130 T 14-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein DDU33_04895 defae782e83b8e1076d996737fe9ff0a 225 Pfam PF12798 4Fe-4S binding domain 49 61 0.16 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_04895 defae782e83b8e1076d996737fe9ff0a 225 Gene3D G3DSA:3.30.70.20 40 216 6.1E-57 T 14-10-2018 DDU33_04895 defae782e83b8e1076d996737fe9ff0a 225 Pfam PF13247 4Fe-4S dicluster domain 86 184 7.2E-24 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_04895 defae782e83b8e1076d996737fe9ff0a 225 Gene3D G3DSA:3.30.70.20 101 154 6.1E-57 T 14-10-2018 DDU33_04895 defae782e83b8e1076d996737fe9ff0a 225 SUPERFAMILY SSF54862 36 218 5.02E-64 T 14-10-2018 DDU33_04895 defae782e83b8e1076d996737fe9ff0a 225 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 128 139 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 Pfam PF07670 Nucleoside recognition 457 588 4.5E-25 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 Pfam PF07670 Nucleoside recognition 285 379 2.3E-12 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 Gene3D G3DSA:3.40.50.300 4 205 3.9E-39 T 14-10-2018 DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 SUPERFAMILY SSF52540 5 176 2.44E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 Pfam PF07664 Ferrous iron transport protein B C terminus 397 452 4.0E-16 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 DDU33_06990 d01da9e24048a8aea39028ebdbc34ccc 618 Pfam PF02421 Ferrous iron transport protein B 5 160 4.3E-51 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 Gene3D G3DSA:3.50.50.60 5 324 1.6E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PIRSF PIRSF000350 1 452 2.0E-87 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 324 1.1E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 SUPERFAMILY SSF55424 342 456 1.58E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 455 1.0E-36 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 456 2.0E-209 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 Gene3D G3DSA:3.30.390.30 344 456 9.0E-49 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 SUPERFAMILY SSF51905 3 376 2.83E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 7.8E-65 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 4.0E-28 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 4.0E-28 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.0E-28 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 4.0E-28 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 4.0E-28 T 14-10-2018 DDU33_05575 0769923df598a7cdd159b2f7f7205366 456 Gene3D G3DSA:3.50.50.60 149 266 1.6E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 SMART SM00448 2 112 1.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 SUPERFAMILY SSF46894 131 196 3.03E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 SUPERFAMILY SSF52172 1 126 1.25E-26 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 Gene3D G3DSA:3.40.50.12740 2 198 6.0E-56 T 14-10-2018 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 4.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 Pfam PF00072 Response regulator receiver domain 4 113 6.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_00920 bb2e12e3cc1aa6c26582b4b01eed7e4b 201 SMART SM00421 139 196 3.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_06865 212ebbb69cf04579760d138f0771292e 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 221 2.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_06865 212ebbb69cf04579760d138f0771292e 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 223 1.5E-71 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 DDU33_06865 212ebbb69cf04579760d138f0771292e 231 SUPERFAMILY SSF161098 6 219 5.76E-47 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_06865 212ebbb69cf04579760d138f0771292e 231 Gene3D G3DSA:1.10.3720.10 2 229 2.7E-57 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_01495 96bf38d9e9ebd44e256ffa3aa4b609b0 317 Gene3D G3DSA:1.20.58.340 241 317 4.1E-26 T 14-10-2018 DDU33_01495 96bf38d9e9ebd44e256ffa3aa4b609b0 317 SUPERFAMILY SSF143865 1 256 1.83E-33 T 14-10-2018 DDU33_01495 96bf38d9e9ebd44e256ffa3aa4b609b0 317 SUPERFAMILY SSF144083 252 315 8.24E-21 T 14-10-2018 DDU33_01495 96bf38d9e9ebd44e256ffa3aa4b609b0 317 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 317 1.9E-100 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 DDU33_01495 96bf38d9e9ebd44e256ffa3aa4b609b0 317 Pfam PF01544 CorA-like Mg2+ transporter protein 26 313 9.7E-55 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 2.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 212 224 2.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 179 201 2.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 2.8E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 SUPERFAMILY SSF55174 298 395 1.37E-16 T 14-10-2018 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 Pfam PF00579 tRNA synthetases class I (W and Y) 31 318 1.1E-82 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 SMART SM00363 335 396 2.9E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 3 395 47.496 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 Gene3D G3DSA:3.40.50.620 7 218 4.3E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 396 1.1E-134 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 SUPERFAMILY SSF52374 8 316 2.5E-96 T 14-10-2018 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 Pfam PF01479 S4 domain 337 379 1.2E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 Gene3D G3DSA:3.10.290.10 328 395 8.9E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DDU33_01420 1c7f7d521e22de1993fefc9c61342764 396 Gene3D G3DSA:1.10.240.10 219 327 4.5E-34 T 14-10-2018 DDU33_09960 301cd593047b2f493ac74d32c2fc99c1 486 Pfam PF02601 Exonuclease VII, large subunit 312 480 2.1E-23 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DDU33_09960 301cd593047b2f493ac74d32c2fc99c1 486 Pfam PF02601 Exonuclease VII, large subunit 121 339 1.9E-80 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DDU33_09960 301cd593047b2f493ac74d32c2fc99c1 486 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 353 9.8E-133 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DDU33_09960 301cd593047b2f493ac74d32c2fc99c1 486 Pfam PF13742 OB-fold nucleic acid binding domain 5 98 8.8E-32 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DDU33_09960 301cd593047b2f493ac74d32c2fc99c1 486 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 483 30.104 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 Gene3D G3DSA:1.10.1020.10 62 162 3.9E-79 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 259 1.3E-67 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 Gene3D G3DSA:3.40.50.150 8 247 3.9E-79 T 14-10-2018 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 SUPERFAMILY SSF53335 7 276 3.72E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 TIGRFAM TIGR00571 dam: DNA adenine methylase 6 276 1.1E-92 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 PIRSF PIRSF000398 2 280 8.4E-67 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 36 50 8.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 184 196 8.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 8.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDU33_06240 6698ffcddfc543918fe00e5c3de87b85 282 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 55 68 8.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DDU33_09035 0c2966bdfd51be068ca0d5774b0d5bfd 248 Pfam PF00484 Carbonic anhydrase 37 187 4.5E-51 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDU33_09035 0c2966bdfd51be068ca0d5774b0d5bfd 248 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDU33_09035 0c2966bdfd51be068ca0d5774b0d5bfd 248 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDU33_09035 0c2966bdfd51be068ca0d5774b0d5bfd 248 SUPERFAMILY SSF53056 1 213 7.46E-74 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DDU33_09035 0c2966bdfd51be068ca0d5774b0d5bfd 248 SMART SM00947 30 193 5.0E-66 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DDU33_09035 0c2966bdfd51be068ca0d5774b0d5bfd 248 Gene3D G3DSA:3.40.1050.10 1 232 2.1E-91 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DDU33_01205 c1ab00dc076749367afbaf624c3dcc65 559 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 510 3.0E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DDU33_01205 c1ab00dc076749367afbaf624c3dcc65 559 SUPERFAMILY SSF52540 3 505 3.44E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01205 c1ab00dc076749367afbaf624c3dcc65 559 Gene3D G3DSA:3.40.50.300 269 554 3.3E-49 T 14-10-2018 DDU33_01205 c1ab00dc076749367afbaf624c3dcc65 559 Gene3D G3DSA:3.40.50.300 1 251 3.2E-46 T 14-10-2018 DDU33_01205 c1ab00dc076749367afbaf624c3dcc65 559 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 2.3E-183 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DDU33_01205 c1ab00dc076749367afbaf624c3dcc65 559 SUPERFAMILY SSF52540 1 220 8.21E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01205 c1ab00dc076749367afbaf624c3dcc65 559 PIRSF PIRSF003128 1 559 2.6E-158 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 Gene3D G3DSA:3.40.50.140 1 156 4.1E-60 T 14-10-2018 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 Gene3D G3DSA:2.70.20.10 217 489 2.2E-169 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 Pfam PF01131 DNA topoisomerase 158 594 1.3E-112 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 SMART SM00493 1 124 6.2E-26 T 14-10-2018 IPR006171 TOPRIM domain DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 SMART SM00437 281 559 2.7E-99 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 Gene3D G3DSA:1.10.460.10 162 596 2.2E-169 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 Gene3D G3DSA:1.10.290.10 290 418 2.2E-169 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 2.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 2.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 2.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 2.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 2.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 SMART SM00436 128 223 2.4E-37 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 Pfam PF01751 Toprim domain 3 135 1.8E-14 T 14-10-2018 IPR006171 TOPRIM domain DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 633 63.628 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 SUPERFAMILY SSF56712 1 601 2.88E-182 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DDU33_08680 785a1811620a4d928548bf1de039c9e7 633 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 622 3.9E-253 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DDU33_00970 dac46fb8542233397ddc43c08bed491d 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 111 4.5E-26 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DDU33_00970 dac46fb8542233397ddc43c08bed491d 115 Pfam PF03960 ArsC family 5 111 1.0E-16 T 14-10-2018 IPR006660 Arsenate reductase-like DDU33_00970 dac46fb8542233397ddc43c08bed491d 115 SUPERFAMILY SSF52833 1 113 3.04E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_00970 dac46fb8542233397ddc43c08bed491d 115 Gene3D G3DSA:3.40.30.10 1 114 1.3E-38 T 14-10-2018 DDU33_03360 19a6209e94e98ce71567372ea69a4f96 182 Gene3D G3DSA:3.40.50.1820 2 182 1.7E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_03360 19a6209e94e98ce71567372ea69a4f96 182 Pfam PF06821 Serine hydrolase 4 175 2.1E-27 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 DDU33_03360 19a6209e94e98ce71567372ea69a4f96 182 SUPERFAMILY SSF53474 2 176 6.97E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_06935 c17c8f5c9a4debb868dfc55a18a12957 430 TIGRFAM TIGR03173 pbuX: xanthine permease 21 426 1.4E-141 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 DDU33_06935 c17c8f5c9a4debb868dfc55a18a12957 430 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 12 424 4.7E-112 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DDU33_06935 c17c8f5c9a4debb868dfc55a18a12957 430 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 342 362 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DDU33_06935 c17c8f5c9a4debb868dfc55a18a12957 430 Pfam PF00860 Permease family 17 394 4.1E-90 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Gene3D G3DSA:3.30.2130.10 302 464 2.1E-48 T 14-10-2018 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 PIRSF PIRSF000727 1 814 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 SUPERFAMILY SSF55021 383 475 3.67E-23 T 14-10-2018 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Gene3D G3DSA:3.40.1160.10 3 295 2.0E-81 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 SUPERFAMILY SSF51735 463 636 6.67E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 SUPERFAMILY SSF55347 614 797 1.7E-51 T 14-10-2018 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Pfam PF00742 Homoserine dehydrogenase 614 810 7.2E-49 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.2E-29 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.8E-141 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Gene3D G3DSA:1.20.120.1320 41 142 2.0E-81 T 14-10-2018 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Pfam PF00696 Amino acid kinase family 2 284 3.9E-42 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Gene3D G3DSA:3.40.50.720 466 811 1.3E-120 T 14-10-2018 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Gene3D G3DSA:3.30.360.10 625 795 1.3E-120 T 14-10-2018 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 SUPERFAMILY SSF53633 1 297 2.98E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 SUPERFAMILY SSF55021 303 380 8.5E-22 T 14-10-2018 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Pfam PF13840 ACT domain 394 454 2.1E-9 T 14-10-2018 IPR027795 CASTOR, ACT domain DDU33_10430 6582fb853c42c152737a741ce8bd9d3d 814 Pfam PF13840 ACT domain 313 375 6.1E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 265 2.8E-110 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 SUPERFAMILY SSF55347 128 237 1.72E-36 T 14-10-2018 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 PIRSF PIRSF000161 1 269 2.3E-91 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 1.4E-44 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 126 2.2E-43 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 Gene3D G3DSA:3.30.360.10 128 235 9.6E-104 T 14-10-2018 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 266 34.917 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 Gene3D G3DSA:3.40.50.720 4 265 9.6E-104 T 14-10-2018 DDU33_08230 ecd253ca252fb1824c10545d6ca9d82e 270 SUPERFAMILY SSF51735 3 269 5.9E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_05790 e1dd465cfeea2271945da80872e9a7c5 774 Pfam PF01228 Glycine radical 644 755 2.0E-42 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 DDU33_05790 e1dd465cfeea2271945da80872e9a7c5 774 Gene3D G3DSA:3.20.70.20 2 774 0.0 T 14-10-2018 DDU33_05790 e1dd465cfeea2271945da80872e9a7c5 774 ProSitePatterns PS00850 Glycine radical domain signature. 744 752 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DDU33_05790 e1dd465cfeea2271945da80872e9a7c5 774 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 774 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DDU33_05790 e1dd465cfeea2271945da80872e9a7c5 774 Pfam PF02901 Pyruvate formate lyase-like 24 628 5.6E-207 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 DDU33_05790 e1dd465cfeea2271945da80872e9a7c5 774 PIRSF PIRSF000379 8 774 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DDU33_05790 e1dd465cfeea2271945da80872e9a7c5 774 SUPERFAMILY SSF51998 5 773 6.1E-291 T 14-10-2018 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 SUPERFAMILY SSF56601 264 623 2.22E-99 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 Gene3D G3DSA:3.90.1310.10 74 257 4.4E-46 T 14-10-2018 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 SUPERFAMILY SSF56519 67 263 1.05E-48 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 Gene3D G3DSA:3.40.710.10 259 632 2.0E-101 T 14-10-2018 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 Gene3D G3DSA:3.30.1390.30 95 170 4.4E-46 T 14-10-2018 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 29 623 7.9E-237 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 Pfam PF03717 Penicillin-binding Protein dimerisation domain 74 249 1.3E-45 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 Pfam PF00905 Penicillin binding protein transpeptidase domain 281 618 1.1E-87 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDU33_02435 8403e526c9b50aee7aef1d5e821665f3 653 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 13 626 51.615 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 1.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 SUPERFAMILY SSF46894 137 236 3.4E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 Pfam PF00072 Response regulator receiver domain 7 114 2.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 SUPERFAMILY SSF52172 2 130 1.34E-35 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 SMART SM00448 5 115 5.7E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 SMART SM00862 158 234 1.4E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 Gene3D G3DSA:1.10.10.10 125 237 4.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_05200 4b2dcc322a16360a586b626c317dc0be 239 Gene3D G3DSA:3.40.50.2300 1 124 3.2E-32 T 14-10-2018 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 Gene3D G3DSA:1.10.1900.20 56 117 2.3E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 Pfam PF00453 Ribosomal protein L20 3 109 3.1E-48 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.878 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.1E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.1E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.1E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 Gene3D G3DSA:1.10.720.90 2 55 1.9E-23 T 14-10-2018 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.7E-52 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 5.0E-9 T 14-10-2018 DDU33_06960 b0f250e3d25b1adc0068906c56bd876d 117 SUPERFAMILY SSF74731 3 116 1.99E-49 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_05470 cdcc617bb1bd3e5e2fee13515d1f535f 130 Pfam PF01381 Helix-turn-helix 7 61 1.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_05470 cdcc617bb1bd3e5e2fee13515d1f535f 130 Gene3D G3DSA:1.10.260.40 2 125 7.2E-17 T 14-10-2018 DDU33_05470 cdcc617bb1bd3e5e2fee13515d1f535f 130 SUPERFAMILY SSF47413 2 65 1.77E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_05470 cdcc617bb1bd3e5e2fee13515d1f535f 130 SMART SM00530 6 61 1.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_06830 49909b159f4bc3f0e31e86dd19e18714 416 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 391 6.1E-106 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 DDU33_06830 49909b159f4bc3f0e31e86dd19e18714 416 SUPERFAMILY SSF48452 73 201 2.45E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_06830 49909b159f4bc3f0e31e86dd19e18714 416 Pfam PF07219 HemY protein N-terminus 26 132 6.4E-31 T 14-10-2018 IPR010817 HemY, N-terminal DDU33_01280 e7cca81de69d1096579397da9d4f291f 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 9.0E-155 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01280 e7cca81de69d1096579397da9d4f291f 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01280 e7cca81de69d1096579397da9d4f291f 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01280 e7cca81de69d1096579397da9d4f291f 360 Pfam PF00953 Glycosyl transferase family 4 99 283 1.7E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DDU33_01280 e7cca81de69d1096579397da9d4f291f 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01280 e7cca81de69d1096579397da9d4f291f 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.061 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 Gene3D G3DSA:3.30.300.10 103 372 1.0E-176 T 14-10-2018 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.676 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 6.6E-198 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 SUPERFAMILY SSF55973 5 109 4.71E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.4E-43 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 SUPERFAMILY SSF55973 233 381 1.33E-72 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 Gene3D G3DSA:3.30.300.10 11 270 1.0E-176 T 14-10-2018 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 PIRSF PIRSF000497 1 382 2.8E-173 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.1E-70 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 Gene3D G3DSA:3.30.300.10 5 233 1.0E-176 T 14-10-2018 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 SUPERFAMILY SSF55973 112 232 7.06E-50 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_07145 bc31830f9dd79d65ab7e794f6a1dcd8e 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 101 1.1E-41 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 PIRSF PIRSF035805 1 192 2.9E-61 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 SUPERFAMILY SSF57716 142 190 1.19E-16 T 14-10-2018 DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 SUPERFAMILY SSF52540 1 141 4.35E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 Gene3D G3DSA:3.40.50.300 1 141 9.0E-27 T 14-10-2018 DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 Gene3D G3DSA:3.30.60.20 144 189 1.1E-9 T 14-10-2018 DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.308 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDU33_08450 422fbc13f3e52a9e325cfb888e1fe33d 192 Pfam PF00265 Thymidine kinase 2 186 2.7E-64 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DDU33_03715 cbd33181906f556e46cf1436949d288c 285 SUPERFAMILY SSF53448 7 278 3.94E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_03715 cbd33181906f556e46cf1436949d288c 285 Gene3D G3DSA:3.90.550.10 7 276 8.1E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_03715 cbd33181906f556e46cf1436949d288c 285 Pfam PF01501 Glycosyl transferase family 8 8 255 3.0E-41 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 DDU33_04235 93bb9f717d6ecbea723b364bc5414d79 319 TIGRFAM TIGR00109 hemH: ferrochelatase 1 316 7.3E-111 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDU33_04235 93bb9f717d6ecbea723b364bc5414d79 319 Pfam PF00762 Ferrochelatase 5 316 4.3E-111 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDU33_04235 93bb9f717d6ecbea723b364bc5414d79 319 SUPERFAMILY SSF53800 3 317 6.38E-103 T 14-10-2018 DDU33_04235 93bb9f717d6ecbea723b364bc5414d79 319 ProSitePatterns PS00534 Ferrochelatase signature. 188 207 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDU33_04235 93bb9f717d6ecbea723b364bc5414d79 319 Gene3D G3DSA:3.40.50.1400 5 317 9.6E-99 T 14-10-2018 DDU33_04235 93bb9f717d6ecbea723b364bc5414d79 319 Gene3D G3DSA:3.40.50.1400 167 300 9.6E-99 T 14-10-2018 DDU33_04235 93bb9f717d6ecbea723b364bc5414d79 319 Hamap MF_00323 Ferrochelatase [hemH]. 4 319 37.558 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DDU33_08245 3ff2a23d3e3322286768741f24eb9740 253 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_08245 3ff2a23d3e3322286768741f24eb9740 253 SUPERFAMILY SSF52540 8 229 1.25E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08245 3ff2a23d3e3322286768741f24eb9740 253 SMART SM00382 33 248 3.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08245 3ff2a23d3e3322286768741f24eb9740 253 Pfam PF00005 ABC transporter 25 170 2.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_08245 3ff2a23d3e3322286768741f24eb9740 253 Gene3D G3DSA:3.40.50.300 6 247 2.0E-57 T 14-10-2018 DDU33_06025 4870af3e75088b6a1a6f66f5cd74f561 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 360 9.1E-108 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DDU33_06025 4870af3e75088b6a1a6f66f5cd74f561 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 8.3E-173 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DDU33_06025 4870af3e75088b6a1a6f66f5cd74f561 378 PIRSF PIRSF000267 2 377 8.2E-125 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 7.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 7.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 7.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 SMART SM00388 230 295 3.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 293 1.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 Gene3D G3DSA:1.10.287.130 181 292 5.6E-17 T 14-10-2018 DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 Gene3D G3DSA:3.30.565.10 293 446 7.7E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 SMART SM00387 339 450 3.0E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 440 3.2E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 SUPERFAMILY SSF55874 285 441 1.05E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_04580 83966892f06ce377dd7d9efafbb7a072 452 SUPERFAMILY SSF47384 214 294 1.71E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 Hamap MF_00822 Urease accessory protein UreE [ureE]. 9 160 19.319 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 PIRSF PIRSF036402 9 173 1.0E-44 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 SUPERFAMILY SSF69287 10 86 1.11E-13 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 Gene3D G3DSA:2.60.260.20 10 86 2.8E-18 T 14-10-2018 DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 Pfam PF02814 UreE urease accessory protein, N-terminal domain 22 82 3.5E-15 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 Gene3D G3DSA:3.30.70.790 88 172 5.1E-24 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 SMART SM00988 14 82 4.1E-13 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 Pfam PF05194 UreE urease accessory protein, C-terminal domain 90 176 4.7E-17 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 DDU33_02670 ae564483036c23011ef86c01b7cb9362 185 SUPERFAMILY SSF69737 88 154 9.81E-15 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DDU33_10660 da87e7c97fae053125a9375d1ad405e3 195 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 2.3E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDU33_10660 da87e7c97fae053125a9375d1ad405e3 195 SMART SM01207 10 185 3.8E-86 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDU33_10660 da87e7c97fae053125a9375d1ad405e3 195 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 192 2.2E-75 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDU33_10660 da87e7c97fae053125a9375d1ad405e3 195 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.288 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DDU33_09600 83fdb3f6d6d01a049fc07cea989cee38 235 Gene3D G3DSA:1.10.260.40 1 82 8.3E-16 T 14-10-2018 DDU33_09600 83fdb3f6d6d01a049fc07cea989cee38 235 SMART SM00530 11 66 1.5E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_09600 83fdb3f6d6d01a049fc07cea989cee38 235 SUPERFAMILY SSF47413 1 70 3.66E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_09600 83fdb3f6d6d01a049fc07cea989cee38 235 Pfam PF01381 Helix-turn-helix 12 66 5.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_07510 6396664822395ddbf1f5f45a5301166b 74 PIRSF PIRSF006188 1 73 3.3E-31 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DDU33_07510 6396664822395ddbf1f5f45a5301166b 74 Pfam PF07208 Protein of unknown function (DUF1414) 26 70 9.5E-20 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DDU33_07510 6396664822395ddbf1f5f45a5301166b 74 SUPERFAMILY SSF158651 1 72 1.96E-25 T 14-10-2018 IPR023202 YejL-like superfamily DDU33_07510 6396664822395ddbf1f5f45a5301166b 74 Gene3D G3DSA:1.10.3390.10 1 74 2.5E-28 T 14-10-2018 IPR023202 YejL-like superfamily DDU33_07510 6396664822395ddbf1f5f45a5301166b 74 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 70 1.0E-15 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DDU33_07510 6396664822395ddbf1f5f45a5301166b 74 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 72 21.98 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 Pfam PF01479 S4 domain 19 63 2.2E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 Gene3D G3DSA:3.30.2350.10 85 316 1.8E-73 T 14-10-2018 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 SMART SM00363 18 83 3.9E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 1.2E-109 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 SUPERFAMILY SSF55120 78 321 7.81E-82 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 8.5E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 SUPERFAMILY SSF55174 18 69 6.39E-11 T 14-10-2018 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06465 ae48bfac35b15fc4f1290f4953ff0e31 325 Gene3D G3DSA:3.10.290.10 2 76 3.9E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 303 24.39 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 Gene3D G3DSA:3.40.50.620 13 230 4.4E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 SUPERFAMILY SSF56037 320 420 8.63E-16 T 14-10-2018 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 Gene3D G3DSA:1.20.59.20 231 314 4.3E-23 T 14-10-2018 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 378 415 2.8E-9 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 SUPERFAMILY SSF52402 16 230 1.01E-63 T 14-10-2018 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 25 200 3.0E-58 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 SUPERFAMILY SSF82829 239 314 1.07E-21 T 14-10-2018 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 Pfam PF01171 PP-loop family 25 197 4.1E-59 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 Pfam PF09179 TilS substrate binding domain 245 311 2.2E-19 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDU33_04050 a05b0c71f6000e6ee760e4c10cd51dee 423 Pfam PF11734 TilS substrate C-terminal domain 377 418 1.4E-9 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DDU33_03420 91f52c6212e0abd443742f21975d0764 163 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 25.339 T 14-10-2018 IPR022973 Ribosomal protein L10 DDU33_03420 91f52c6212e0abd443742f21975d0764 163 SUPERFAMILY SSF160369 4 158 3.4E-47 T 14-10-2018 DDU33_03420 91f52c6212e0abd443742f21975d0764 163 Gene3D G3DSA:3.30.70.1730 1 124 1.8E-36 T 14-10-2018 DDU33_03420 91f52c6212e0abd443742f21975d0764 163 Pfam PF00466 Ribosomal protein L10 5 101 2.1E-28 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DDU33_03420 91f52c6212e0abd443742f21975d0764 163 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02290 3a85b62246b7a7a9282696af2db24cbf 588 Gene3D G3DSA:3.40.50.12780 1 301 2.8E-56 T 14-10-2018 DDU33_02290 3a85b62246b7a7a9282696af2db24cbf 588 Pfam PF00501 AMP-binding enzyme 11 453 6.5E-100 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DDU33_02290 3a85b62246b7a7a9282696af2db24cbf 588 Gene3D G3DSA:3.40.50.12780 310 446 1.0E-32 T 14-10-2018 DDU33_02290 3a85b62246b7a7a9282696af2db24cbf 588 ProSitePatterns PS00455 Putative AMP-binding domain signature. 181 192 - T 14-10-2018 IPR020845 AMP-binding, conserved site DDU33_02290 3a85b62246b7a7a9282696af2db24cbf 588 SUPERFAMILY SSF56801 6 583 1.57E-116 T 14-10-2018 DDU33_04730 84087ce4a3a74b2e1484a57f8156d595 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 4.3E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_04730 84087ce4a3a74b2e1484a57f8156d595 224 SUPERFAMILY SSF56784 3 223 1.12E-44 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_04730 84087ce4a3a74b2e1484a57f8156d595 224 Gene3D G3DSA:3.40.50.1000 5 218 2.3E-62 T 14-10-2018 IPR023214 HAD superfamily DDU33_04730 84087ce4a3a74b2e1484a57f8156d595 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 221 6.1E-64 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 DDU33_04730 84087ce4a3a74b2e1484a57f8156d595 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 3.5E-24 T 14-10-2018 DDU33_04730 84087ce4a3a74b2e1484a57f8156d595 224 Gene3D G3DSA:1.10.150.240 16 95 2.3E-62 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 SUPERFAMILY SSF81338 1 224 1.83E-68 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 Gene3D G3DSA:1.20.1080.10 1 228 8.0E-87 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 8.9E-61 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 35.621 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 PRINTS PR00783 Major intrinsic protein family signature 204 224 3.4E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.4E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.4E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.4E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 PRINTS PR00783 Major intrinsic protein family signature 135 153 3.4E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 PRINTS PR00783 Major intrinsic protein family signature 165 187 3.4E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 ProSitePatterns PS00221 MIP family signature. 60 68 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DDU33_01400 b713ffd0f261346bfc791e44ee7c2452 228 Pfam PF00230 Major intrinsic protein 2 221 1.1E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 427 8.2E-98 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 Gene3D G3DSA:3.90.190.20 287 429 6.8E-24 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 Pfam PF08245 Mur ligase middle domain 54 222 2.6E-11 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 Gene3D G3DSA:3.40.1190.10 3 286 1.5E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 SUPERFAMILY SSF53623 12 284 1.98E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 PIRSF PIRSF001563 7 431 6.5E-109 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DDU33_08410 f07d314eba6861b2f1af74aee88cbb8d 431 SUPERFAMILY SSF53244 287 426 8.97E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_05995 30f64e90a138ccf9831042b298113e9b 269 Gene3D G3DSA:3.30.1240.10 92 192 4.7E-59 T 14-10-2018 DDU33_05995 30f64e90a138ccf9831042b298113e9b 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 236 1.7E-19 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDU33_05995 30f64e90a138ccf9831042b298113e9b 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 14-10-2018 DDU33_05995 30f64e90a138ccf9831042b298113e9b 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 11 263 4.6E-47 T 14-10-2018 DDU33_05995 30f64e90a138ccf9831042b298113e9b 269 Gene3D G3DSA:3.40.50.1000 9 259 4.7E-59 T 14-10-2018 IPR023214 HAD superfamily DDU33_05995 30f64e90a138ccf9831042b298113e9b 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 10 263 1.2E-46 T 14-10-2018 IPR000150 Cof family GO:0016787 DDU33_05995 30f64e90a138ccf9831042b298113e9b 269 SUPERFAMILY SSF56784 6 266 4.01E-55 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_06570 7a3e5f18beffda701a999373354536b3 214 SMART SM01266 4 57 1.7E-12 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DDU33_06570 7a3e5f18beffda701a999373354536b3 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_06570 7a3e5f18beffda701a999373354536b3 214 Pfam PF12464 Maltose acetyltransferase 6 54 5.5E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DDU33_06570 7a3e5f18beffda701a999373354536b3 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 163 1.2E-13 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06570 7a3e5f18beffda701a999373354536b3 214 SUPERFAMILY SSF51161 3 194 5.68E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_06570 7a3e5f18beffda701a999373354536b3 214 Gene3D G3DSA:2.160.10.10 1 200 7.8E-69 T 14-10-2018 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 250 1.7E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 297 315 1.7E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 251 269 1.7E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 PIRSF PIRSF006809 30 452 8.7E-142 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 Gene3D G3DSA:3.40.50.11060 47 167 1.5E-36 T 14-10-2018 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 Gene3D G3DSA:3.40.50.300 227 397 1.1E-39 T 14-10-2018 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 39 391 2.1E-146 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 Pfam PF01926 50S ribosome-binding GTPase 230 348 7.6E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 Pfam PF13167 GTP-binding GTPase N-terminal 54 141 2.5E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 Pfam PF16360 GTP-binding GTPase Middle Region 143 222 2.3E-25 T 14-10-2018 IPR032305 GTP-binding protein, middle domain DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 SUPERFAMILY SSF54980 395 453 6.69E-5 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 Hamap MF_00900 GTPase HflX [hflX]. 56 420 46.092 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DDU33_01090 f17770fcb3d6c7f58ea5cd3db2794960 464 SUPERFAMILY SSF52540 227 411 5.85E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08660 705d3ba319055c81e5b748e9bfce685c 100 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 19 92 3.8E-32 T 14-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 DDU33_06075 84624af9135187cbf4bee7232ef48a9c 464 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 4 464 9.6E-153 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 DDU33_06075 84624af9135187cbf4bee7232ef48a9c 464 Pfam PF13520 Amino acid permease 7 435 6.6E-72 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DDU33_06075 84624af9135187cbf4bee7232ef48a9c 464 PIRSF PIRSF006060 1 464 4.3E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DDU33_06075 84624af9135187cbf4bee7232ef48a9c 464 Gene3D G3DSA:1.20.1740.10 1 459 1.6E-59 T 14-10-2018 DDU33_06235 23d95d812ed38c8193ddb7b84d7a8473 362 SUPERFAMILY SSF56796 4 357 1.31E-114 T 14-10-2018 DDU33_06235 23d95d812ed38c8193ddb7b84d7a8473 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 356 70.173 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDU33_06235 23d95d812ed38c8193ddb7b84d7a8473 362 Gene3D G3DSA:3.40.50.1970 1 172 2.8E-64 T 14-10-2018 DDU33_06235 23d95d812ed38c8193ddb7b84d7a8473 362 PIRSF PIRSF001455 4 362 5.9E-108 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDU33_06235 23d95d812ed38c8193ddb7b84d7a8473 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 7.7E-119 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDU33_06235 23d95d812ed38c8193ddb7b84d7a8473 362 Pfam PF01761 3-dehydroquinate synthase 67 325 3.4E-108 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DDU33_06235 23d95d812ed38c8193ddb7b84d7a8473 362 Gene3D G3DSA:1.20.1090.10 173 361 1.7E-63 T 14-10-2018 DDU33_01410 db33b3367e107855d2561a069310b98b 245 Pfam PF01980 Uncharacterised protein family UPF0066 22 144 3.9E-41 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain DDU33_01410 db33b3367e107855d2561a069310b98b 245 Gene3D G3DSA:2.40.30.70 23 149 9.0E-51 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily DDU33_01410 db33b3367e107855d2561a069310b98b 245 Gene3D G3DSA:3.30.2310.10 150 235 1.0E-18 T 14-10-2018 DDU33_01410 db33b3367e107855d2561a069310b98b 245 SUPERFAMILY SSF118196 4 230 2.35E-81 T 14-10-2018 IPR036413 YaeB-like superfamily DDU33_01410 db33b3367e107855d2561a069310b98b 245 ProSitePatterns PS01318 TsaA-like domain signature. 88 99 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site DDU33_01410 db33b3367e107855d2561a069310b98b 245 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 5 149 6.1E-55 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain DDU33_00720 abab895577a8e4c3c66804099f1b73af 69 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 3 60 1.8E-17 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DDU33_04160 214906613b1aedf111e699e587e0b1e7 76 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 73 1.0E-29 T 14-10-2018 DDU33_04160 214906613b1aedf111e699e587e0b1e7 76 Pfam PF10571 Uncharacterised protein family UPF0547 5 29 3.3E-11 T 14-10-2018 IPR018886 Uncharacterised domain UPF0547 DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 Pfam PF00266 Aminotransferase class-V 5 370 6.6E-88 T 14-10-2018 IPR000192 Aminotransferase class V domain DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 Gene3D G3DSA:3.40.640.10 16 262 1.1E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 406 1.2E-232 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 SUPERFAMILY SSF53383 5 392 1.28E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 Gene3D G3DSA:3.90.1150.10 5 378 1.1E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 397 54.324 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DDU33_09425 f9cfdc6723d282a59017e980b2fde677 406 PIRSF PIRSF005572 2 386 1.7E-133 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 SUPERFAMILY SSF51230 79 154 9.55E-25 T 14-10-2018 IPR011053 Single hybrid motif DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 Pfam PF00364 Biotin-requiring enzyme 81 153 7.5E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 5.8E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 5.8E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 5.8E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 Gene3D G3DSA:2.40.50.100 75 154 5.8E-31 T 14-10-2018 DDU33_01855 191e7106f4a95bffa41df123aa4494e2 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 1.8E-64 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DDU33_08355 4a69f6a8a3e97281a690448f6eacbfc4 290 PIRSF PIRSF006232 2 290 2.1E-83 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DDU33_08355 4a69f6a8a3e97281a690448f6eacbfc4 290 Gene3D G3DSA:2.60.120.10 17 281 9.9E-80 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_08355 4a69f6a8a3e97281a690448f6eacbfc4 290 Gene3D G3DSA:2.60.120.10 151 255 9.9E-80 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_08355 4a69f6a8a3e97281a690448f6eacbfc4 290 Pfam PF05726 Pirin C-terminal cupin domain 184 286 3.0E-26 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DDU33_08355 4a69f6a8a3e97281a690448f6eacbfc4 290 SUPERFAMILY SSF51182 9 288 4.63E-77 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DDU33_08355 4a69f6a8a3e97281a690448f6eacbfc4 290 Pfam PF02678 Pirin 20 129 8.8E-31 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 Pfam PF01220 Dehydroquinase class II 3 139 1.2E-63 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 73.35 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 PIRSF PIRSF001399 1 146 1.9E-63 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 Gene3D G3DSA:3.40.50.9100 1 147 1.5E-69 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 SUPERFAMILY SSF52304 3 145 7.72E-63 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 142 5.0E-63 T 14-10-2018 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDU33_01455 9129cd74f82e3ea1815d8389ea53aba6 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 142 7.9E-64 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DDU33_01480 3665f3164cbfd808841f1a492084026e 110 Pfam PF04219 Protein of unknown function, DUF 10 97 2.7E-34 T 14-10-2018 IPR007335 Protein of unknown function DUF413 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 Gene3D G3DSA:3.40.50.360 55 219 1.5E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PIRSF PIRSF000207 4 599 6.6E-244 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 SUPERFAMILY SSF52343 444 599 5.5E-53 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00369 Flavodoxin signature 65 78 7.8E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00369 Flavodoxin signature 169 188 7.8E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00369 Flavodoxin signature 145 155 7.8E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00369 Flavodoxin signature 113 124 7.8E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 2.5E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 Gene3D G3DSA:1.20.990.10 280 384 1.6E-72 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 Gene3D G3DSA:2.40.30.10 233 439 1.6E-72 T 14-10-2018 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 Gene3D G3DSA:3.40.50.80 445 599 6.4E-61 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 Pfam PF00258 Flavodoxin 66 189 1.3E-27 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 1.1E-20 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 599 1.6E-256 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 Pfam PF00667 FAD binding domain 232 424 1.8E-28 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 SUPERFAMILY SSF52218 61 207 7.78E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_03730 4ed4a7c43be56e91a4d419459cb0a562 599 SUPERFAMILY SSF63380 228 446 8.38E-64 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PIRSF PIRSF000724 1 391 2.7E-130 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 Pfam PF00162 Phosphoglycerate kinase 6 377 6.1E-133 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 363 380 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 340 351 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 PRINTS PR00477 Phosphoglycerate kinase family signature 304 329 5.4E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 387 37.968 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 SUPERFAMILY SSF53748 3 387 2.0E-139 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 Gene3D G3DSA:3.40.50.1260 10 383 1.3E-146 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_04520 60c93d7fb574664e524bbeeb0c7df279 391 Gene3D G3DSA:3.40.50.1260 166 377 1.3E-146 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 Pfam PF04542 Sigma-70 region 2 25 91 8.4E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 Gene3D G3DSA:1.10.1740.10 1 120 1.2E-42 T 14-10-2018 DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 SUPERFAMILY SSF88659 122 183 8.78E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 Gene3D G3DSA:1.10.10.10 121 190 7.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 SUPERFAMILY SSF88946 3 105 1.37E-30 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 189 7.0E-90 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 Pfam PF08281 Sigma-70, region 4 132 180 2.7E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_07135 ea337d24c9d32de593afa1fdc529b07f 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 182 2.4E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DDU33_09165 22ddb77a898030ae8e4972a1eeced470 141 PIRSF PIRSF006276 1 140 9.2E-48 T 14-10-2018 IPR006015 Universal stress protein A DDU33_09165 22ddb77a898030ae8e4972a1eeced470 141 Gene3D G3DSA:3.40.50.620 1 141 3.2E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_09165 22ddb77a898030ae8e4972a1eeced470 141 Pfam PF00582 Universal stress protein family 1 137 5.3E-19 T 14-10-2018 IPR006016 UspA DDU33_09165 22ddb77a898030ae8e4972a1eeced470 141 SUPERFAMILY SSF52402 1 138 1.92E-30 T 14-10-2018 DDU33_02310 98c5b30f6ea6d22f4aea19f868cc8996 282 SUPERFAMILY SSF103481 189 280 3.14E-13 T 14-10-2018 DDU33_02310 98c5b30f6ea6d22f4aea19f868cc8996 282 Pfam PF00892 EamA-like transporter family 4 132 4.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_02310 98c5b30f6ea6d22f4aea19f868cc8996 282 Pfam PF00892 EamA-like transporter family 145 278 3.7E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_02310 98c5b30f6ea6d22f4aea19f868cc8996 282 SUPERFAMILY SSF103481 35 135 1.24E-11 T 14-10-2018 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 315 2.9E-42 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 316 2.6E-122 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 SUPERFAMILY SSF51735 1 145 1.76E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 8.9E-45 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 SUPERFAMILY SSF56327 146 317 1.5E-40 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 316 57.311 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 PIRSF PIRSF000102 1 316 6.6E-63 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 Gene3D G3DSA:3.40.50.720 1 146 4.9E-62 T 14-10-2018 DDU33_05030 642b31a0f96d330907372db13b2cebb3 318 Gene3D G3DSA:3.90.110.10 147 317 3.6E-49 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DDU33_06985 b6d0e4c7f9da6462d335a8ba75f4b18d 88 SMART SM00899 4 85 5.5E-11 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DDU33_06985 b6d0e4c7f9da6462d335a8ba75f4b18d 88 SUPERFAMILY SSF50037 28 86 3.05E-9 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal DDU33_06985 b6d0e4c7f9da6462d335a8ba75f4b18d 88 Gene3D G3DSA:2.30.30.90 4 88 6.3E-16 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain DDU33_06985 b6d0e4c7f9da6462d335a8ba75f4b18d 88 Pfam PF04023 FeoA domain 5 83 1.1E-13 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DDU33_01930 56005724352ff34b85acdb546bda9993 665 Gene3D G3DSA:3.40.50.2000 407 588 8.7E-137 T 14-10-2018 DDU33_01930 56005724352ff34b85acdb546bda9993 665 Gene3D G3DSA:3.40.50.11380 265 406 8.7E-137 T 14-10-2018 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 289 308 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 190 212 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 12 35 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 39 58 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 84 104 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 323 341 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 228 247 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 344 363 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 PRINTS PR00166 Aromatic amino acid permease signature 151 171 9.6E-77 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 Gene3D G3DSA:1.20.1740.10 1 401 1.3E-7 T 14-10-2018 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 373 4.1E-119 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DDU33_03695 ca0605f3c1c9e34e90b989829bc06e04 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 371 6.1E-125 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 SUPERFAMILY SSF56104 4 284 8.83E-104 T 14-10-2018 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 285 26.847 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 Pfam PF01259 SAICAR synthetase 7 261 1.9E-103 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 Gene3D G3DSA:3.30.200.20 1 96 1.8E-32 T 14-10-2018 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 1 285 1.5E-102 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 ProSitePatterns PS01058 SAICAR synthetase signature 2. 197 205 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 ProSitePatterns PS01057 SAICAR synthetase signature 1. 98 112 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_00355 90bfc699df9bf270d4fc01a8af52b3cf 285 Gene3D G3DSA:3.30.470.20 98 241 4.2E-60 T 14-10-2018 DDU33_01415 a726c35d7d61ddeee964f4f38e88696f 302 Pfam PF01040 UbiA prenyltransferase family 23 273 2.6E-40 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DDU33_01415 a726c35d7d61ddeee964f4f38e88696f 302 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 15 298 9.9E-120 T 14-10-2018 DDU33_01415 a726c35d7d61ddeee964f4f38e88696f 302 PIRSF PIRSF005355 1 302 2.8E-87 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 DDU33_01415 a726c35d7d61ddeee964f4f38e88696f 302 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 6 299 21.397 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DDU33_04425 9d7d2f5dc966d7c2426d4e66b62c8a58 339 PIRSF PIRSF002465 2 339 2.9E-110 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DDU33_04425 9d7d2f5dc966d7c2426d4e66b62c8a58 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 116.657 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DDU33_04425 9d7d2f5dc966d7c2426d4e66b62c8a58 339 Pfam PF02504 Fatty acid synthesis protein 5 330 2.4E-94 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DDU33_04425 9d7d2f5dc966d7c2426d4e66b62c8a58 339 SUPERFAMILY SSF53659 4 337 4.11E-90 T 14-10-2018 DDU33_04425 9d7d2f5dc966d7c2426d4e66b62c8a58 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 336 2.6E-100 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DDU33_04425 9d7d2f5dc966d7c2426d4e66b62c8a58 339 Gene3D G3DSA:3.40.718.10 3 338 6.2E-108 T 14-10-2018 DDU33_04220 6a49dbd79f49959df5dd441ee1002a48 685 SUPERFAMILY SSF51445 185 653 7.41E-83 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_04220 6a49dbd79f49959df5dd441ee1002a48 685 Gene3D G3DSA:3.20.20.80 177 418 2.8E-54 T 14-10-2018 DDU33_04220 6a49dbd79f49959df5dd441ee1002a48 685 Pfam PF00128 Alpha amylase, catalytic domain 227 604 4.2E-45 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_04220 6a49dbd79f49959df5dd441ee1002a48 685 Gene3D G3DSA:3.20.20.80 430 654 3.8E-39 T 14-10-2018 DDU33_04220 6a49dbd79f49959df5dd441ee1002a48 685 SMART SM00642 194 647 1.4E-89 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DDU33_04220 6a49dbd79f49959df5dd441ee1002a48 685 PIRSF PIRSF036917 1 685 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 DDU33_01110 fe347db42feb4ae93407e2c440db513a 324 Gene3D G3DSA:3.40.50.510 1 141 5.2E-38 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DDU33_01110 fe347db42feb4ae93407e2c440db513a 324 SUPERFAMILY SSF52728 162 316 3.01E-48 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DDU33_01110 fe347db42feb4ae93407e2c440db513a 324 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 2.3E-49 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DDU33_01110 fe347db42feb4ae93407e2c440db513a 324 Gene3D G3DSA:3.40.35.10 162 322 6.6E-54 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DDU33_01110 fe347db42feb4ae93407e2c440db513a 324 SUPERFAMILY SSF53062 1 130 3.92E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DDU33_01110 fe347db42feb4ae93407e2c440db513a 324 Pfam PF03610 PTS system fructose IIA component 4 113 1.9E-25 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DDU33_01110 fe347db42feb4ae93407e2c440db513a 324 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 113 1.5E-39 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 DDU33_07545 498d4ab639e6879cf1e0f66f4c9b1f16 89 SUPERFAMILY SSF64307 10 89 2.75E-21 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_07545 498d4ab639e6879cf1e0f66f4c9b1f16 89 Pfam PF01206 Sulfurtransferase TusA 21 89 8.2E-18 T 14-10-2018 IPR001455 TusA-like domain DDU33_07545 498d4ab639e6879cf1e0f66f4c9b1f16 89 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 14-10-2018 IPR001455 TusA-like domain DDU33_07545 498d4ab639e6879cf1e0f66f4c9b1f16 89 Gene3D G3DSA:3.30.110.40 17 89 5.8E-26 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 203.794 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Pfam PF01411 tRNA synthetases class II (A) 6 554 7.1E-231 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 853 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 SUPERFAMILY SSF55681 3 254 6.46E-108 T 14-10-2018 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 SMART SM00863 652 695 3.8E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 SUPERFAMILY SSF101353 255 464 2.22E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Pfam PF02272 DHHA1 domain 732 870 2.7E-30 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Gene3D G3DSA:3.10.310.40 762 872 1.2E-34 T 14-10-2018 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 SUPERFAMILY SSF50447 453 551 2.15E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Gene3D G3DSA:3.30.930.10 1 251 2.8E-122 T 14-10-2018 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Gene3D G3DSA:2.40.30.130 462 551 5.0E-11 T 14-10-2018 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.0E-17 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Gene3D G3DSA:3.30.980.10 555 694 1.8E-50 T 14-10-2018 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 SUPERFAMILY SSF55186 553 713 1.31E-52 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 1.7E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.7E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 1.7E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 1.7E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.7E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DDU33_09160 7d717bfb09de548e233f1e7f23ee5114 874 Gene3D G3DSA:3.30.54.20 623 676 1.8E-50 T 14-10-2018 DDU33_05755 d9e9529722deff911fa50b38e3c8ff5f 420 Pfam PF14279 HNH endonuclease 21 75 1.3E-11 T 14-10-2018 IPR029471 HNH endonuclease 5 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Gene3D G3DSA:2.60.40.10 611 706 2.2E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 440 454 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 SUPERFAMILY SSF51445 299 607 1.06E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Gene3D G3DSA:2.60.40.10 207 296 1.5E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 SUPERFAMILY SSF49303 611 708 5.25E-17 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 SMART SM01038 733 1001 7.9E-95 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Pfam PF02929 Beta galactosidase small chain 736 1000 2.1E-63 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 348 373 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 SUPERFAMILY SSF49303 208 297 1.1E-18 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 SUPERFAMILY SSF74650 721 1000 5.65E-75 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Gene3D G3DSA:2.60.120.260 2 206 2.1E-73 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Gene3D G3DSA:2.70.98.10 717 1001 1.1E-71 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 SUPERFAMILY SSF49785 5 205 3.4E-60 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 299 611 3.3E-90 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Pfam PF00703 Glycosyl hydrolases family 2 208 296 1.2E-4 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Pfam PF16353 Domain of unknown function(DUF4981) 620 705 2.8E-14 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 PRINTS PR00132 Glycosyl hydrolase family 2 signature 519 534 7.9E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 PRINTS PR00132 Glycosyl hydrolase family 2 signature 338 356 7.9E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 PRINTS PR00132 Glycosyl hydrolase family 2 signature 133 148 7.9E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 PRINTS PR00132 Glycosyl hydrolase family 2 signature 307 321 7.9E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 PRINTS PR00132 Glycosyl hydrolase family 2 signature 440 455 7.9E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Gene3D G3DSA:3.20.20.80 298 608 6.8E-105 T 14-10-2018 DDU33_10065 1ca3433bc2a5465eef696bd6450d1c33 1003 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 205 1.1E-41 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DDU33_10420 3047dbc4079f343300610742fa5dd614 772 SUPERFAMILY SSF56925 616 771 2.2E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_10420 3047dbc4079f343300610742fa5dd614 772 Gene3D G3DSA:2.40.160.90 634 772 2.0E-19 T 14-10-2018 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Pfam PF12344 Ultra-violet resistance protein B 554 595 7.0E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Hamap MF_00204 UvrABC system protein B [uvrB]. 6 667 43.796 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Gene3D G3DSA:3.40.50.300 417 591 5.2E-50 T 14-10-2018 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 SUPERFAMILY SSF52540 6 417 3.29E-140 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 8 665 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Gene3D G3DSA:3.40.50.300 1 236 5.0E-75 T 14-10-2018 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 SUPERFAMILY SSF52540 40 585 2.61E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Pfam PF00271 Helicase conserved C-terminal domain 437 546 2.0E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Pfam PF04851 Type III restriction enzyme, res subunit 17 100 3.1E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Pfam PF02151 UvrB/uvrC motif 632 666 7.4E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 SMART SM00490 462 548 2.6E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Gene3D G3DSA:4.10.860.10 616 671 5.6E-13 T 14-10-2018 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 SUPERFAMILY SSF46600 626 668 3.14E-10 T 14-10-2018 IPR036876 UVR domain superfamily DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 Gene3D G3DSA:3.40.50.300 262 416 8.2E-52 T 14-10-2018 DDU33_08150 4cbd12f2f251bbfe5de73c61916e5281 672 SMART SM00487 12 428 5.3E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 ProDom PD414759 MEMBRANE CELL TRANSLOCASE DNA TRANSMEMBRANE FTSK DNA-BINDING NUCLEOTIDE-BINDING ATP-BINDING INNER 119 305 1.0E-27 T 14-10-2018 DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 Gene3D G3DSA:1.10.10.10 930 989 3.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 Pfam PF09397 Ftsk gamma domain 928 987 9.6E-24 T 14-10-2018 IPR018541 FtsK gamma domain DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 18 177 4.3E-22 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 Gene3D G3DSA:3.40.50.300 610 912 2.8E-118 T 14-10-2018 DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 SUPERFAMILY SSF46785 927 987 1.04E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 Gene3D G3DSA:3.30.980.40 505 609 7.0E-32 T 14-10-2018 DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 SMART SM00843 926 989 5.1E-28 T 14-10-2018 IPR018541 FtsK gamma domain DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 SUPERFAMILY SSF52540 585 898 4.43E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08470 08c7908a03676505108ef2ee459df3f2 989 Pfam PF01580 FtsK/SpoIIIE family 613 825 5.0E-67 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DDU33_04560 cf5a98ddc2cddf43f76b30d8f6d120aa 145 Gene3D G3DSA:3.40.630.30 1 145 2.6E-41 T 14-10-2018 DDU33_04560 cf5a98ddc2cddf43f76b30d8f6d120aa 145 Pfam PF00583 Acetyltransferase (GNAT) family 36 118 4.8E-16 T 14-10-2018 IPR000182 GNAT domain DDU33_04560 cf5a98ddc2cddf43f76b30d8f6d120aa 145 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 141 3.7E-41 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DDU33_04560 cf5a98ddc2cddf43f76b30d8f6d120aa 145 SUPERFAMILY SSF55729 2 145 1.49E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_06440 0d2d4419c8eb6cdc32dbbe42d46fbbf3 101 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 100 4.4E-31 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_06440 0d2d4419c8eb6cdc32dbbe42d46fbbf3 101 Pfam PF01491 Frataxin-like domain 1 95 1.5E-20 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_06440 0d2d4419c8eb6cdc32dbbe42d46fbbf3 101 SMART SM01219 1 100 8.3E-35 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_06440 0d2d4419c8eb6cdc32dbbe42d46fbbf3 101 Gene3D G3DSA:3.30.920.10 1 101 1.5E-27 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_06440 0d2d4419c8eb6cdc32dbbe42d46fbbf3 101 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 101 23.589 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_06440 0d2d4419c8eb6cdc32dbbe42d46fbbf3 101 SUPERFAMILY SSF55387 1 95 1.17E-29 T 14-10-2018 DDU33_06440 0d2d4419c8eb6cdc32dbbe42d46fbbf3 101 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 383 1.8E-66 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 Gene3D G3DSA:2.40.30.170 67 290 2.0E-60 T 14-10-2018 DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 Gene3D G3DSA:2.40.50.100 79 207 2.0E-60 T 14-10-2018 DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 Pfam PF00529 HlyD membrane-fusion protein of T1SS 24 371 8.5E-8 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 Gene3D G3DSA:2.40.420.20 291 381 2.0E-60 T 14-10-2018 DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 280 3.2E-29 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 Gene3D G3DSA:1.10.287.470 114 173 2.0E-60 T 14-10-2018 DDU33_07530 74065775eef4cd20fc1cb464121663ce 402 SUPERFAMILY SSF111369 68 285 9.81E-37 T 14-10-2018 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 TIGRFAM TIGR01799 CM_T: chorismate mutase 3 85 3.9E-41 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 Gene3D G3DSA:1.20.59.10 2 78 3.9E-17 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 Gene3D G3DSA:1.10.3660.10 247 372 3.1E-47 T 14-10-2018 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 Pfam PF01817 Chorismate mutase type II 7 84 8.6E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 SMART SM00830 7 87 3.8E-30 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 SUPERFAMILY SSF48600 2 87 1.76E-23 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 Gene3D G3DSA:3.40.50.720 79 246 5.1E-47 T 14-10-2018 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 SUPERFAMILY SSF51735 89 238 1.02E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 SUPERFAMILY SSF48179 240 365 4.25E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 Pfam PF02153 Prephenate dehydrogenase 126 340 4.0E-28 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DDU33_00495 8ab5accbc3001c27a8f7ec02f587119b 372 PIRSF PIRSF001499 1 372 5.2E-169 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 SUPERFAMILY SSF55347 149 312 6.25E-78 T 14-10-2018 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 PIRSF PIRSF000149 1 333 5.0E-132 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 4.9E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 Gene3D G3DSA:3.30.360.10 149 314 1.2E-151 T 14-10-2018 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 SMART SM00846 3 150 1.2E-92 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.3E-69 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 Gene3D G3DSA:3.40.50.720 4 326 1.2E-151 T 14-10-2018 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 4.5E-134 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 SUPERFAMILY SSF51735 3 166 1.08E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09500 9d7cb340c107da90556b1d931e7a0476 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_09795 736726f362d9feeb314a4082d8a24e86 268 Pfam PF00290 Tryptophan synthase alpha chain 9 267 1.7E-92 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_09795 736726f362d9feeb314a4082d8a24e86 268 SUPERFAMILY SSF51366 1 267 6.88E-85 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_09795 736726f362d9feeb314a4082d8a24e86 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 264 4.4E-103 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_09795 736726f362d9feeb314a4082d8a24e86 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 266 35.974 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_09795 736726f362d9feeb314a4082d8a24e86 268 Gene3D G3DSA:3.20.20.70 1 268 2.1E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_09795 736726f362d9feeb314a4082d8a24e86 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 235 270 9.5E-12 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 130 165 2.6E-15 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 166 201 1.1E-14 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 26 57 310.0 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 94 129 3.4E-15 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 271 306 1.6E-8 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 202 234 3.8E-7 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SMART SM00671 58 93 1.7E-13 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SUPERFAMILY SSF81901 30 212 5.06E-64 T 14-10-2018 DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 SUPERFAMILY SSF81901 184 310 1.44E-39 T 14-10-2018 DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Gene3D G3DSA:1.25.40.10 17 131 8.9E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Gene3D G3DSA:1.25.40.10 132 213 9.3E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Gene3D G3DSA:1.25.40.10 214 320 9.6E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Pfam PF08238 Sel1 repeat 271 306 1.6E-6 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Pfam PF08238 Sel1 repeat 59 92 1.9E-13 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Pfam PF08238 Sel1 repeat 95 129 5.6E-13 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Pfam PF08238 Sel1 repeat 166 200 2.2E-13 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Pfam PF08238 Sel1 repeat 235 268 3.0E-11 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Pfam PF08238 Sel1 repeat 203 233 4.0E-5 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05400 2227bc9ad493b36c48516e10ed1a76c9 320 Pfam PF08238 Sel1 repeat 130 165 9.9E-13 T 14-10-2018 IPR006597 Sel1-like repeat DDU33_05330 cb169ec4d2bc6cde156856fee249f5a9 533 PIRSF PIRSF002741 2 533 5.1E-127 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDU33_05330 cb169ec4d2bc6cde156856fee249f5a9 533 Gene3D G3DSA:3.40.190.10 206 518 1.3E-189 T 14-10-2018 DDU33_05330 cb169ec4d2bc6cde156856fee249f5a9 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 447 2.8E-110 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DDU33_05330 cb169ec4d2bc6cde156856fee249f5a9 533 Gene3D G3DSA:3.90.76.10 39 205 1.3E-189 T 14-10-2018 DDU33_05330 cb169ec4d2bc6cde156856fee249f5a9 533 SUPERFAMILY SSF53850 24 527 1.12E-160 T 14-10-2018 DDU33_05330 cb169ec4d2bc6cde156856fee249f5a9 533 Gene3D G3DSA:3.10.105.10 287 505 1.3E-189 T 14-10-2018 DDU33_05330 cb169ec4d2bc6cde156856fee249f5a9 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 Pfam PF07687 Peptidase dimerisation domain 176 282 7.1E-23 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 373 2.8E-176 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 Gene3D G3DSA:3.30.70.360 179 292 2.9E-134 T 14-10-2018 DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 SUPERFAMILY SSF53187 3 374 3.02E-64 T 14-10-2018 DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 SUPERFAMILY SSF55031 180 289 2.24E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 62 71 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 Gene3D G3DSA:3.40.630.10 8 365 2.9E-134 T 14-10-2018 DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 50.125 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DDU33_00965 61cfdf1dd18f01fe5391a5212c025278 377 Pfam PF01546 Peptidase family M20/M25/M40 63 372 1.3E-43 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DDU33_04505 4173aadf54743d7ac5112bfc3f087252 212 Pfam PF03591 AzlC protein 1 141 8.6E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease DDU33_10740 f2ec79569fa2ef6f88ded17714fd41da 396 Gene3D G3DSA:1.25.40.10 32 157 7.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10740 f2ec79569fa2ef6f88ded17714fd41da 396 Gene3D G3DSA:3.40.50.2000 260 351 6.0E-9 T 14-10-2018 DDU33_10740 f2ec79569fa2ef6f88ded17714fd41da 396 SUPERFAMILY SSF53756 133 387 1.44E-23 T 14-10-2018 DDU33_10740 f2ec79569fa2ef6f88ded17714fd41da 396 SUPERFAMILY SSF48452 33 110 3.96E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10740 f2ec79569fa2ef6f88ded17714fd41da 396 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 308 372 1.3E-7 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DDU33_05565 e5a1603c9aedebbad7d847b28423f72a 159 Gene3D G3DSA:3.40.1280.10 1 158 1.1E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDU33_05565 e5a1603c9aedebbad7d847b28423f72a 159 PIRSF PIRSF029256 1 154 1.4E-68 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DDU33_05565 e5a1603c9aedebbad7d847b28423f72a 159 Pfam PF00588 SpoU rRNA Methylase family 2 142 6.4E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DDU33_05565 e5a1603c9aedebbad7d847b28423f72a 159 SUPERFAMILY SSF75217 2 152 3.2E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DDU33_05565 e5a1603c9aedebbad7d847b28423f72a 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.413 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DDU33_05565 e5a1603c9aedebbad7d847b28423f72a 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.2E-69 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DDU33_02515 c16bad1972e7fa00207a953f6197fa20 392 Pfam PF02563 Polysaccharide biosynthesis/export protein 87 171 3.2E-16 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DDU33_02515 c16bad1972e7fa00207a953f6197fa20 392 Gene3D G3DSA:3.10.560.10 257 360 2.8E-62 T 14-10-2018 DDU33_02515 c16bad1972e7fa00207a953f6197fa20 392 Gene3D G3DSA:3.30.1950.10 87 175 2.8E-62 T 14-10-2018 DDU33_02515 c16bad1972e7fa00207a953f6197fa20 392 Gene3D G3DSA:3.10.560.10 181 255 2.8E-62 T 14-10-2018 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 Gene3D G3DSA:1.20.1270.10 523 602 4.0E-23 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 SUPERFAMILY SSF100934 533 605 2.39E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 Pfam PF00012 Hsp70 protein 4 601 6.5E-256 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 Gene3D G3DSA:3.90.640.10 228 315 7.5E-162 T 14-10-2018 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 SUPERFAMILY SSF53067 186 381 3.62E-65 T 14-10-2018 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 6.5E-290 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 SUPERFAMILY SSF100920 383 539 4.71E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 629 35.84 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 Gene3D G3DSA:3.30.420.40 5 378 7.5E-162 T 14-10-2018 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 SUPERFAMILY SSF53067 1 181 1.41E-63 T 14-10-2018 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 Gene3D G3DSA:2.60.34.10 382 522 1.3E-67 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DDU33_04150 3925cc1538f6388483d287093ad1465e 633 Gene3D G3DSA:3.30.420.40 179 365 7.5E-162 T 14-10-2018 DDU33_03720 cd1d85b7630d737eba841b9aaa73abf1 287 Gene3D G3DSA:3.40.1190.20 1 287 2.2E-89 T 14-10-2018 IPR029056 Ribokinase-like DDU33_03720 cd1d85b7630d737eba841b9aaa73abf1 287 SUPERFAMILY SSF53613 1 277 1.71E-72 T 14-10-2018 IPR029056 Ribokinase-like DDU33_03720 cd1d85b7630d737eba841b9aaa73abf1 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 286 1.6E-122 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DDU33_03720 cd1d85b7630d737eba841b9aaa73abf1 287 Pfam PF08543 Phosphomethylpyrimidine kinase 73 262 2.0E-16 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DDU33_03720 cd1d85b7630d737eba841b9aaa73abf1 287 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 52.494 T 14-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 DDU33_06810 2620b8017fa319815e4ccab8a79f7e2c 235 Pfam PF00753 Metallo-beta-lactamase superfamily 14 137 7.7E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_06810 2620b8017fa319815e4ccab8a79f7e2c 235 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 235 1.7E-19 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DDU33_06810 2620b8017fa319815e4ccab8a79f7e2c 235 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 235 39.081 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DDU33_06810 2620b8017fa319815e4ccab8a79f7e2c 235 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 231 1.8E-82 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DDU33_06810 2620b8017fa319815e4ccab8a79f7e2c 235 SMART SM00849 12 165 3.0E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_06810 2620b8017fa319815e4ccab8a79f7e2c 235 SUPERFAMILY SSF56281 2 228 2.03E-57 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_06810 2620b8017fa319815e4ccab8a79f7e2c 235 Gene3D G3DSA:3.60.15.10 1 235 2.9E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 208 364 9.7E-42 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 SUPERFAMILY SSF52540 206 365 7.99E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 208 340 1.0E-43 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 SUPERFAMILY SSF53448 8 194 3.6E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 Gene3D G3DSA:3.90.550.10 2 205 1.3E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 Gene3D G3DSA:2.20.25.120 252 284 2.4E-51 T 14-10-2018 DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 Gene3D G3DSA:3.40.50.300 209 361 2.4E-51 T 14-10-2018 DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 197 27.31 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 195 2.0E-68 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DDU33_00900 936e1ed276c6cf5f2d2d8472c70382b1 371 Pfam PF12804 MobA-like NTP transferase domain 10 165 2.5E-29 T 14-10-2018 IPR025877 MobA-like NTP transferase DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 Gene3D G3DSA:1.20.1080.10 1 247 5.2E-71 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 ProSitePatterns PS00221 MIP family signature. 62 70 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 SUPERFAMILY SSF81338 2 246 1.83E-64 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 PRINTS PR00783 Major intrinsic protein family signature 44 68 6.6E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 PRINTS PR00783 Major intrinsic protein family signature 136 154 6.6E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 PRINTS PR00783 Major intrinsic protein family signature 81 100 6.6E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 PRINTS PR00783 Major intrinsic protein family signature 2 21 6.6E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 PRINTS PR00783 Major intrinsic protein family signature 226 246 6.6E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 PRINTS PR00783 Major intrinsic protein family signature 178 200 6.6E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_03315 1f5216e7ee5fe7c1c33a62b77ac4cb86 247 Pfam PF00230 Major intrinsic protein 2 243 2.5E-43 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 PIRSF PIRSF001359 12 358 1.3E-92 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 16 356 1.2E-91 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 Gene3D G3DSA:3.20.20.70 2 358 1.4E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 5.7E-177 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 13 357 7.9E-115 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DDU33_04515 e6e8565b5583eae03c3e7f393891107b 358 SUPERFAMILY SSF51569 1 356 2.01E-130 T 14-10-2018 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 Gene3D G3DSA:3.90.190.20 321 474 1.1E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 SUPERFAMILY SSF53623 104 321 3.66E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 18 475 42.865 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 Gene3D G3DSA:3.40.1190.10 107 320 5.0E-85 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 SUPERFAMILY SSF53244 322 470 1.12E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 Pfam PF08245 Mur ligase middle domain 123 303 1.8E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 Gene3D G3DSA:3.40.50.720 19 106 1.1E-33 T 14-10-2018 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 Pfam PF01225 Mur ligase family, catalytic domain 20 117 5.8E-28 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 20 469 2.7E-186 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 412 3.2E-22 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DDU33_04335 21c3755d02478628fedc7c086985c7e0 475 SUPERFAMILY SSF51984 20 105 4.32E-28 T 14-10-2018 DDU33_05240 95119a219200954ca446fa005f858322 306 Pfam PF01297 Zinc-uptake complex component A periplasmic 21 302 2.0E-57 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DDU33_05240 95119a219200954ca446fa005f858322 306 PRINTS PR00690 Adhesin family signature 49 62 2.9E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_05240 95119a219200954ca446fa005f858322 306 PRINTS PR00690 Adhesin family signature 192 213 2.9E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_05240 95119a219200954ca446fa005f858322 306 PRINTS PR00690 Adhesin family signature 245 263 2.9E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DDU33_05240 95119a219200954ca446fa005f858322 306 Gene3D G3DSA:3.40.50.1980 20 192 1.3E-49 T 14-10-2018 DDU33_05240 95119a219200954ca446fa005f858322 306 SUPERFAMILY SSF53807 20 303 6.87E-72 T 14-10-2018 DDU33_05240 95119a219200954ca446fa005f858322 306 Gene3D G3DSA:3.40.50.1980 193 306 9.0E-41 T 14-10-2018 DDU33_02735 1a938ce567691724479026783b3be59d 298 SUPERFAMILY SSF46785 4 85 5.19E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_02735 1a938ce567691724479026783b3be59d 298 Pfam PF03466 LysR substrate binding domain 91 291 6.7E-20 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_02735 1a938ce567691724479026783b3be59d 298 SUPERFAMILY SSF53850 87 296 2.71E-25 T 14-10-2018 DDU33_02735 1a938ce567691724479026783b3be59d 298 Gene3D G3DSA:3.40.190.290 91 292 3.9E-31 T 14-10-2018 DDU33_02735 1a938ce567691724479026783b3be59d 298 Gene3D G3DSA:1.10.10.10 1 85 2.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_02735 1a938ce567691724479026783b3be59d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_08490 0798c40cfa3fb3f76bc9b66c561c4449 239 PIRSF PIRSF006755 1 237 8.8E-71 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDU33_08490 0798c40cfa3fb3f76bc9b66c561c4449 239 SUPERFAMILY SSF52540 1 225 7.08E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08490 0798c40cfa3fb3f76bc9b66c561c4449 239 Gene3D G3DSA:3.40.50.300 3 230 2.9E-50 T 14-10-2018 DDU33_08490 0798c40cfa3fb3f76bc9b66c561c4449 239 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 184 6.8E-41 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDU33_08490 0798c40cfa3fb3f76bc9b66c561c4449 239 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 224 25.773 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DDU33_08490 0798c40cfa3fb3f76bc9b66c561c4449 239 Pfam PF13500 AAA domain 3 215 2.4E-29 T 14-10-2018 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 Pfam PF08264 Anticodon-binding domain of tRNA 686 844 9.7E-27 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 6.4E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 562 571 2.5E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 2.5E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.5E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 2.5E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 527 540 2.5E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 SUPERFAMILY SSF52374 3 649 5.42E-135 T 14-10-2018 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 Gene3D G3DSA:1.10.730.20 641 930 2.5E-92 T 14-10-2018 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 1.6E-213 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.424 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 SUPERFAMILY SSF50677 204 403 2.2E-54 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 SUPERFAMILY SSF47323 653 929 3.43E-80 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 Gene3D G3DSA:3.40.50.620 25 630 1.5E-238 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 846 2.3E-292 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DDU33_05220 0e6cedb59dc9d0eead0fb86bfb5196b5 938 Gene3D G3DSA:3.90.740.10 195 408 1.5E-238 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDU33_05900 23d13d6f58f15a3357077eeb3468a76f 256 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 196 4.3E-38 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Pfam PF00384 Molybdopterin oxidoreductase 95 568 4.8E-86 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 SMART SM00926 38 92 3.6E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Gene3D G3DSA:3.30.200.210 38 673 0.0 T 14-10-2018 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 835 30.722 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 24 1.5E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 38 91 2.9E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 43 60 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Gene3D G3DSA:2.40.40.20 711 835 3.2E-45 T 14-10-2018 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 SUPERFAMILY SSF53706 32 651 2.36E-201 T 14-10-2018 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 835 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Gene3D G3DSA:3.40.50.740 95 624 0.0 T 14-10-2018 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Gene3D G3DSA:3.40.228.10 175 709 0.0 T 14-10-2018 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 Pfam PF01568 Molydopterin dinucleotide binding domain 721 829 5.0E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 SUPERFAMILY SSF50692 694 835 2.26E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DDU33_01010 92b678dc81fed7e59a770ea430c4da30 835 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 2.2E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DDU33_09985 646bb65255226e51d18242fc405f65ee 581 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 392 3.1E-78 T 14-10-2018 IPR003776 YcaO-like domain DDU33_09985 646bb65255226e51d18242fc405f65ee 581 Gene3D G3DSA:1.10.490.140 162 273 7.8E-6 T 14-10-2018 DDU33_09985 646bb65255226e51d18242fc405f65ee 581 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 12 405 8.3E-156 T 14-10-2018 IPR003776 YcaO-like domain DDU33_04045 594f6d6eec9707166fb618317443e495 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 92 1.4E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DDU33_04045 594f6d6eec9707166fb618317443e495 301 Gene3D G3DSA:1.10.443.10 113 295 6.9E-70 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DDU33_04045 594f6d6eec9707166fb618317443e495 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 301 55.435 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DDU33_04045 594f6d6eec9707166fb618317443e495 301 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 300 4.2E-112 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DDU33_04045 594f6d6eec9707166fb618317443e495 301 Pfam PF00589 Phage integrase family 115 287 6.7E-54 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDU33_04045 594f6d6eec9707166fb618317443e495 301 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 301 57.626 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DDU33_04045 594f6d6eec9707166fb618317443e495 301 SUPERFAMILY SSF56349 9 290 6.47E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDU33_04045 594f6d6eec9707166fb618317443e495 301 Gene3D G3DSA:1.10.150.130 10 102 3.7E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 SUPERFAMILY SSF51161 4 264 4.53E-79 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 PIRSF PIRSF000456 6 264 5.5E-105 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 Gene3D G3DSA:1.20.1180.10 199 264 3.2E-25 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 7 264 46.176 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 155 183 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 10 262 3.0E-104 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 144 6.2E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 54 2.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 Gene3D G3DSA:2.160.10.10 3 198 4.8E-53 T 14-10-2018 DDU33_06295 e411196f2a7ec3087c87dac49ee1dbd8 264 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 182 263 4.0E-28 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 DDU33_01815 bc10b112c136b54d96c022133fcbfd78 685 SUPERFAMILY SSF161098 427 667 1.68E-42 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_01815 bc10b112c136b54d96c022133fcbfd78 685 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 493 671 1.9E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_01815 bc10b112c136b54d96c022133fcbfd78 685 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 202 393 1.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_01815 bc10b112c136b54d96c022133fcbfd78 685 SUPERFAMILY SSF161098 144 390 5.49E-44 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_01815 bc10b112c136b54d96c022133fcbfd78 685 Gene3D G3DSA:1.10.3720.10 134 404 6.8E-51 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_01815 bc10b112c136b54d96c022133fcbfd78 685 Gene3D G3DSA:1.10.3720.10 417 681 3.8E-43 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_02010 716114ad46b355257dad7ce97d13161d 348 Gene3D G3DSA:3.30.160.60 304 342 3.3E-18 T 14-10-2018 DDU33_02010 716114ad46b355257dad7ce97d13161d 348 Pfam PF02618 YceG-like family 45 330 6.2E-83 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DDU33_02010 716114ad46b355257dad7ce97d13161d 348 Gene3D G3DSA:3.30.160.60 74 112 3.6E-12 T 14-10-2018 DDU33_02010 716114ad46b355257dad7ce97d13161d 348 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 340 32.968 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DDU33_02010 716114ad46b355257dad7ce97d13161d 348 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 3 338 1.3E-117 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DDU33_08515 c2dc99fd1b737fce946e063591d3be49 299 SUPERFAMILY SSF53850 89 291 7.96E-44 T 14-10-2018 DDU33_08515 c2dc99fd1b737fce946e063591d3be49 299 Gene3D G3DSA:3.40.190.290 91 289 1.6E-65 T 14-10-2018 DDU33_08515 c2dc99fd1b737fce946e063591d3be49 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_08515 c2dc99fd1b737fce946e063591d3be49 299 Gene3D G3DSA:1.10.10.10 2 89 1.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_08515 c2dc99fd1b737fce946e063591d3be49 299 Pfam PF03466 LysR substrate binding domain 88 287 2.6E-42 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_08515 c2dc99fd1b737fce946e063591d3be49 299 SUPERFAMILY SSF46785 4 88 8.55E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 SUPERFAMILY SSF51246 331 444 2.88E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 5.7E-246 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.7E-86 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.0E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 Gene3D G3DSA:3.40.50.20 1 85 1.3E-35 T 14-10-2018 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 Gene3D G3DSA:3.30.470.20 86 433 8.1E-158 T 14-10-2018 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 SUPERFAMILY SSF52440 1 113 4.17E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.1E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 Gene3D G3DSA:3.30.1490.20 131 203 8.1E-158 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 SUPERFAMILY SSF56059 83 346 1.94E-70 T 14-10-2018 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 SMART SM00878 336 441 9.7E-65 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DDU33_01850 a091f22da430b76dcd6e67888b4af4ad 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DDU33_05405 24f263198127d3c49520a694a773a669 756 SUPERFAMILY SSF51726 392 754 7.46E-120 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_05405 24f263198127d3c49520a694a773a669 756 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 753 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDU33_05405 24f263198127d3c49520a694a773a669 756 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 427 749 1.2E-159 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDU33_05405 24f263198127d3c49520a694a773a669 756 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 307 2.6E-126 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDU33_05405 24f263198127d3c49520a694a773a669 756 Gene3D G3DSA:3.20.20.210 6 520 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_05405 24f263198127d3c49520a694a773a669 756 PIRSF PIRSF000382 1 756 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDU33_05405 24f263198127d3c49520a694a773a669 756 Gene3D G3DSA:3.20.20.210 385 752 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_05405 24f263198127d3c49520a694a773a669 756 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 754 37.105 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DDU33_05405 24f263198127d3c49520a694a773a669 756 SUPERFAMILY SSF51726 5 389 1.27E-109 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DDU33_05735 687485dbd1dedb5e0207ae0b09d33fd8 225 PIRSF PIRSF029950 1 225 7.3E-93 T 14-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 DDU33_05735 687485dbd1dedb5e0207ae0b09d33fd8 225 Gene3D G3DSA:3.30.70.2660 1 225 2.3E-97 T 14-10-2018 DDU33_05735 687485dbd1dedb5e0207ae0b09d33fd8 225 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 8 223 1.2E-51 T 14-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 DDU33_05735 687485dbd1dedb5e0207ae0b09d33fd8 225 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 5 216 2.6E-43 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 DDU33_05735 687485dbd1dedb5e0207ae0b09d33fd8 225 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 5 46 4.2E-16 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 Gene3D G3DSA:3.40.30.10 173 243 1.3E-23 T 14-10-2018 DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 Pfam PF08534 Redoxin 7 161 3.0E-32 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 PRINTS PR00160 Glutaredoxin signature 174 192 9.3E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 PRINTS PR00160 Glutaredoxin signature 215 228 9.3E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 PRINTS PR00160 Glutaredoxin signature 229 242 9.3E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 Pfam PF00462 Glutaredoxin 174 232 4.1E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 SUPERFAMILY SSF52833 7 242 6.64E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 165 242 1.8E-37 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 DDU33_05265 e68a0dec6bf98e5f302d4e4cc45bb25e 245 Gene3D G3DSA:3.40.30.10 6 167 3.6E-62 T 14-10-2018 DDU33_00060 ebdeb77b3f71cedf7e523086a7c96196 141 Pfam PF06078 Bacterial protein of unknown function (DUF937) 4 113 6.6E-11 T 14-10-2018 IPR009282 Protein of unknown function DUF937 DDU33_00060 ebdeb77b3f71cedf7e523086a7c96196 141 SUPERFAMILY SSF140804 7 136 3.14E-31 T 14-10-2018 IPR027405 YidB-like DDU33_00060 ebdeb77b3f71cedf7e523086a7c96196 141 Gene3D G3DSA:1.10.10.690 2 141 2.7E-35 T 14-10-2018 IPR027405 YidB-like DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 SUPERFAMILY SSF81891 168 378 3.4E-45 T 14-10-2018 DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 Gene3D G3DSA:3.30.460.10 5 166 7.9E-59 T 14-10-2018 DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 8 438 1.3E-150 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 Pfam PF12626 Polymerase A arginine-rich C-terminus 314 433 2.5E-34 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 Gene3D G3DSA:1.10.3090.10 168 417 1.1E-86 T 14-10-2018 DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 Pfam PF01743 Poly A polymerase head domain 38 169 3.1E-36 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 197 255 7.4E-18 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 SUPERFAMILY SSF81301 11 165 1.31E-39 T 14-10-2018 DDU33_05675 5f134b77fa26d9d5a353621a4acb5ba7 446 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 2 443 35.132 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 SMART SM01400 4 121 1.8E-79 T 14-10-2018 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 SUPERFAMILY SSF53271 69 307 1.12E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 314 3.5E-32 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 3.5E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 315 4.6E-124 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 315 49.766 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 Gene3D G3DSA:3.40.50.2020 148 291 1.7E-135 T 14-10-2018 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 Gene3D G3DSA:3.40.50.2020 7 303 1.7E-135 T 14-10-2018 DDU33_08845 3f7cb45be0fd6fcfded05b014410bd35 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DDU33_03815 d55a05af02725fc6e6b041c708f3c064 191 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 5.2E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DDU33_03815 d55a05af02725fc6e6b041c708f3c064 191 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 163 179 5.2E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DDU33_03815 d55a05af02725fc6e6b041c708f3c064 191 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 105 120 5.2E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DDU33_03815 d55a05af02725fc6e6b041c708f3c064 191 TIGRFAM TIGR00077 lspA: signal peptidase II 5 123 5.4E-31 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DDU33_03815 d55a05af02725fc6e6b041c708f3c064 191 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 188 16.522 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DDU33_03815 d55a05af02725fc6e6b041c708f3c064 191 ProSitePatterns PS00855 Signal peptidases II signature. 108 120 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DDU33_03815 d55a05af02725fc6e6b041c708f3c064 191 Pfam PF01252 Signal peptidase (SPase) II 17 182 3.9E-35 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DDU33_00600 cbcc86e10ec927a53c946cc13867f91e 87 Gene3D G3DSA:3.40.30.10 2 87 1.1E-5 T 14-10-2018 DDU33_00600 cbcc86e10ec927a53c946cc13867f91e 87 PIRSF PIRSF037291 1 86 2.4E-31 T 14-10-2018 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related DDU33_00600 cbcc86e10ec927a53c946cc13867f91e 87 SUPERFAMILY SSF52833 4 85 5.87E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 4.2E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 Pfam PF01084 Ribosomal protein S18 19 68 9.8E-26 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 5.0E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 SUPERFAMILY SSF46911 3 74 3.01E-30 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 5.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 5.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 5.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 5.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 Gene3D G3DSA:4.10.640.10 20 75 4.3E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00570 3242b86f669119433fc2f06cf4b1ad0f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.58 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 SUPERFAMILY SSF75615 114 204 7.72E-26 T 14-10-2018 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Gene3D G3DSA:1.10.8.210 149 210 5.8E-11 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 1.6E-16 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 208 3.2E-79 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.2E-7 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Gene3D G3DSA:3.30.950.10 332 473 4.9E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Hamap MF_01646 Siroheme synthase [cysG]. 1 458 50.694 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Gene3D G3DSA:3.30.160.110 113 148 1.6E-18 T 14-10-2018 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 SUPERFAMILY SSF53790 212 455 1.23E-77 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 SUPERFAMILY SSF51735 1 113 7.52E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Gene3D G3DSA:3.40.1010.10 214 331 1.1E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 PIRSF PIRSF036426 1 466 8.9E-199 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Gene3D G3DSA:3.40.50.720 1 112 5.1E-34 T 14-10-2018 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 449 2.9E-91 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Pfam PF13241 Putative NAD(P)-binding 6 115 1.3E-29 T 14-10-2018 DDU33_03910 9795195fa8ad0cbdb5c3c9f1c272bcdf 474 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 428 1.3E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DDU33_09260 acb88acc469791974ca6e3128269ffe0 148 SUPERFAMILY SSF54523 13 134 3.51E-23 T 14-10-2018 DDU33_09260 acb88acc469791974ca6e3128269ffe0 148 Gene3D G3DSA:3.30.700.10 13 144 1.1E-29 T 14-10-2018 DDU33_09260 acb88acc469791974ca6e3128269ffe0 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 4.7E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DDU33_09260 acb88acc469791974ca6e3128269ffe0 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 9.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DDU33_03950 b945a0bc45813afae0f4a79a495331cd 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 477 2.5E-136 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_03950 b945a0bc45813afae0f4a79a495331cd 487 PIRSF PIRSF002457 1 483 5.8E-123 T 14-10-2018 IPR030676 Citrate carrier CitT-related DDU33_03950 b945a0bc45813afae0f4a79a495331cd 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 482 1.1E-143 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_08145 aaee7203e14e64c6f6ab60089faa744a 361 PIRSF PIRSF028774 1 361 1.0E-181 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 DDU33_08145 aaee7203e14e64c6f6ab60089faa744a 361 Pfam PF01728 FtsJ-like methyltransferase 188 326 4.9E-8 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DDU33_08145 aaee7203e14e64c6f6ab60089faa744a 361 Gene3D G3DSA:3.40.50.150 178 358 3.9E-55 T 14-10-2018 DDU33_08145 aaee7203e14e64c6f6ab60089faa744a 361 SUPERFAMILY SSF53335 186 296 3.19E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_08145 aaee7203e14e64c6f6ab60089faa744a 361 Gene3D G3DSA:3.30.70.2810 1 79 6.5E-33 T 14-10-2018 DDU33_08145 aaee7203e14e64c6f6ab60089faa744a 361 Gene3D G3DSA:3.30.2300.20 80 177 3.6E-35 T 14-10-2018 DDU33_08145 aaee7203e14e64c6f6ab60089faa744a 361 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 358 83.143 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 Gene3D G3DSA:3.40.50.300 38 171 9.0E-6 T 14-10-2018 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 SMART SM00421 838 895 1.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 ProSitePatterns PS00622 LuxR-type HTH domain signature. 855 882 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 855 871 9.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 871 883 9.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 841 855 9.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 Pfam PF00196 Bacterial regulatory proteins, luxR family 840 894 5.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 Gene3D G3DSA:1.10.10.10 810 900 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_04225 bc19a579654da5f392d70d95053c309e 905 SUPERFAMILY SSF52540 30 259 4.32E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04225 bc19a579654da5f392d70d95053c309e 905 SUPERFAMILY SSF46894 832 896 1.19E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 Gene3D G3DSA:1.25.40.10 449 809 6.1E-70 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_04225 bc19a579654da5f392d70d95053c309e 905 SUPERFAMILY SSF48452 450 808 2.8E-128 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_00005 df076dde67c9292362d9031e198ee580 672 Gene3D G3DSA:3.40.50.300 4 265 2.9E-99 T 14-10-2018 DDU33_00005 df076dde67c9292362d9031e198ee580 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 39.651 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 DDU33_00005 df076dde67c9292362d9031e198ee580 672 Gene3D G3DSA:3.40.50.300 273 632 2.0E-129 T 14-10-2018 DDU33_00005 df076dde67c9292362d9031e198ee580 672 Gene3D G3DSA:1.10.10.160 108 181 2.9E-99 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DDU33_00005 df076dde67c9292362d9031e198ee580 672 Pfam PF13361 UvrD-like helicase C-terminal domain 270 613 5.0E-75 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DDU33_00005 df076dde67c9292362d9031e198ee580 672 Gene3D G3DSA:1.10.486.10 376 544 2.0E-129 T 14-10-2018 DDU33_00005 df076dde67c9292362d9031e198ee580 672 SUPERFAMILY SSF52540 1 636 1.27E-165 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00005 df076dde67c9292362d9031e198ee580 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 DDU33_00005 df076dde67c9292362d9031e198ee580 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 266 5.1E-76 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DDU33_05105 66def6f98866ced6e7e8d9118da5de9a 180 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 12 179 6.7E-58 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW DDU33_05105 66def6f98866ced6e7e8d9118da5de9a 180 Pfam PF13431 Tetratricopeptide repeat 93 125 9.3E-6 T 14-10-2018 DDU33_05105 66def6f98866ced6e7e8d9118da5de9a 180 SUPERFAMILY SSF48452 37 171 3.57E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_05105 66def6f98866ced6e7e8d9118da5de9a 180 SMART SM00028 105 138 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_05105 66def6f98866ced6e7e8d9118da5de9a 180 SMART SM00028 37 70 2.8E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_05105 66def6f98866ced6e7e8d9118da5de9a 180 SMART SM00028 71 104 6.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_05105 66def6f98866ced6e7e8d9118da5de9a 180 Gene3D G3DSA:1.25.40.10 32 179 2.2E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_05775 7b7ae08e03faab9984b624b61cbd6756 676 Gene3D G3DSA:1.10.1370.10 139 607 6.0E-262 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DDU33_05775 7b7ae08e03faab9984b624b61cbd6756 676 Gene3D G3DSA:1.10.1370.40 14 672 6.0E-262 T 14-10-2018 DDU33_05775 7b7ae08e03faab9984b624b61cbd6756 676 Pfam PF01432 Peptidase family M3 221 674 2.4E-163 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DDU33_05775 7b7ae08e03faab9984b624b61cbd6756 676 SUPERFAMILY SSF55486 1 674 2.93E-203 T 14-10-2018 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 SMART SM00245 329 531 8.5E-68 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 Gene3D G3DSA:2.30.42.10 239 324 3.0E-11 T 14-10-2018 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 551 4.2E-115 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 SMART SM00228 249 327 9.2E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 666 1.2E-39 T 14-10-2018 IPR020992 Tail specific protease, C-terminal DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 Gene3D G3DSA:3.90.226.10 326 548 1.8E-56 T 14-10-2018 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 Pfam PF03572 Peptidase family S41 359 529 3.7E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 SUPERFAMILY SSF52096 176 535 9.77E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 244 324 8.4E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_05075 65691ddaa5742b286c59e333166d49b0 671 SUPERFAMILY SSF50156 220 353 4.18E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DDU33_01820 311322fd53af4dd06b9b4c78bf6bc451 347 Pfam PF13343 Bacterial extracellular solute-binding protein 79 289 2.2E-32 T 14-10-2018 DDU33_01820 311322fd53af4dd06b9b4c78bf6bc451 347 Gene3D G3DSA:3.40.190.10 34 310 8.3E-122 T 14-10-2018 DDU33_01820 311322fd53af4dd06b9b4c78bf6bc451 347 Gene3D G3DSA:3.40.190.10 136 325 8.3E-122 T 14-10-2018 DDU33_01820 311322fd53af4dd06b9b4c78bf6bc451 347 SUPERFAMILY SSF53850 27 338 2.98E-70 T 14-10-2018 DDU33_01820 311322fd53af4dd06b9b4c78bf6bc451 347 PIRSF PIRSF002825 2 344 5.2E-70 T 14-10-2018 IPR026045 Ferric binding protein DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 SUPERFAMILY SSF46894 130 204 1.56E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 SMART SM00448 5 118 4.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 Pfam PF00072 Response regulator receiver domain 7 118 6.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 SUPERFAMILY SSF52172 5 136 3.27E-35 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 SMART SM00421 146 203 6.2E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.4E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DDU33_00195 57a09718f16fdc29144a7410c76c65f8 209 Gene3D G3DSA:3.40.50.12740 6 208 2.5E-67 T 14-10-2018 DDU33_00155 3361ddeba35220683891db74778bdb5c 253 Gene3D G3DSA:3.30.420.10 1 190 6.0E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_00155 3361ddeba35220683891db74778bdb5c 253 Pfam PF00929 Exonuclease 10 176 4.6E-40 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDU33_00155 3361ddeba35220683891db74778bdb5c 253 SUPERFAMILY SSF53098 8 185 1.41E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_00155 3361ddeba35220683891db74778bdb5c 253 SMART SM00479 8 185 2.1E-51 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDU33_00155 3361ddeba35220683891db74778bdb5c 253 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 226 1.9E-79 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_00155 3361ddeba35220683891db74778bdb5c 253 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 8 245 2.5E-90 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_04595 b6ccf3afac552ce07942585a6e7c4e40 297 Gene3D G3DSA:3.40.190.290 92 292 1.7E-38 T 14-10-2018 DDU33_04595 b6ccf3afac552ce07942585a6e7c4e40 297 Gene3D G3DSA:1.10.10.10 2 87 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_04595 b6ccf3afac552ce07942585a6e7c4e40 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_04595 b6ccf3afac552ce07942585a6e7c4e40 297 Pfam PF03466 LysR substrate binding domain 90 287 3.7E-24 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_04595 b6ccf3afac552ce07942585a6e7c4e40 297 SUPERFAMILY SSF46785 2 112 2.32E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_04595 b6ccf3afac552ce07942585a6e7c4e40 297 SUPERFAMILY SSF53850 89 295 8.32E-30 T 14-10-2018 DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 Gene3D G3DSA:2.40.40.10 72 371 6.3E-128 T 14-10-2018 IPR036908 RlpA-like domain superfamily DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 Pfam PF03562 MltA specific insert domain 130 272 7.6E-45 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 Pfam PF06725 3D domain 292 372 5.3E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 PIRSF PIRSF019422 2 167 3.6E-11 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 PIRSF PIRSF019422 165 372 6.6E-68 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 Gene3D G3DSA:2.40.240.50 143 277 6.3E-128 T 14-10-2018 DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 SUPERFAMILY SSF50685 59 371 1.46E-101 T 14-10-2018 IPR036908 RlpA-like domain superfamily DDU33_09970 23ff543055e74ea1f706fc5ea12e749a 372 SMART SM00925 143 272 1.2E-70 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 Pfam PF04055 Radical SAM superfamily 66 219 1.9E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 PIRSF PIRSF001619 5 335 1.8E-126 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 Hamap MF_01694 Biotin synthase [bioB]. 24 329 39.068 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 326 7.1E-17 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 Gene3D G3DSA:3.20.20.70 20 330 4.6E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 TIGRFAM TIGR00433 bioB: biotin synthase 30 326 1.5E-116 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 SMART SM00876 236 328 4.3E-43 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 SMART SM00729 59 265 3.7E-29 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DDU33_01460 df19ce8dc43ebf02013fad612c01996c 335 SUPERFAMILY SSF102114 23 328 6.67E-86 T 14-10-2018 DDU33_03665 8a261381535d0a5904af428ffefa0bbe 264 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 19.582 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DDU33_03665 8a261381535d0a5904af428ffefa0bbe 264 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 9.9E-79 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DDU33_03665 8a261381535d0a5904af428ffefa0bbe 264 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 2.6E-93 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DDU33_03665 8a261381535d0a5904af428ffefa0bbe 264 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 Pfam PF00375 Sodium:dicarboxylate symporter family 29 437 6.6E-105 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 PRINTS PR00173 Glutamate-aspartate symporter signature 100 125 8.0E-23 T 14-10-2018 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 PRINTS PR00173 Glutamate-aspartate symporter signature 391 411 8.0E-23 T 14-10-2018 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 PRINTS PR00173 Glutamate-aspartate symporter signature 70 90 8.0E-23 T 14-10-2018 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 8.0E-23 T 14-10-2018 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 PRINTS PR00173 Glutamate-aspartate symporter signature 364 383 8.0E-23 T 14-10-2018 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 PRINTS PR00173 Glutamate-aspartate symporter signature 176 198 8.0E-23 T 14-10-2018 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 Gene3D G3DSA:1.10.3860.10 6 439 3.6E-102 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DDU33_08690 e9b538a9bb38086ca1f53fe1d4f6bb69 439 SUPERFAMILY SSF118215 28 437 1.57E-94 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DDU33_08330 6d3190c7ceacd1b3a49e0b6f10bce344 480 Gene3D G3DSA:3.40.50.2000 3 473 1.2E-178 T 14-10-2018 DDU33_08330 6d3190c7ceacd1b3a49e0b6f10bce344 480 Pfam PF00534 Glycosyl transferases group 1 285 445 1.8E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DDU33_08330 6d3190c7ceacd1b3a49e0b6f10bce344 480 SUPERFAMILY SSF53756 3 478 8.03E-116 T 14-10-2018 DDU33_08330 6d3190c7ceacd1b3a49e0b6f10bce344 480 Pfam PF08323 Starch synthase catalytic domain 2 233 5.4E-67 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DDU33_08330 6d3190c7ceacd1b3a49e0b6f10bce344 480 Gene3D G3DSA:3.40.50.2000 249 458 1.2E-178 T 14-10-2018 DDU33_08330 6d3190c7ceacd1b3a49e0b6f10bce344 480 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 44.469 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DDU33_08330 6d3190c7ceacd1b3a49e0b6f10bce344 480 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 1.1E-163 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 SUPERFAMILY SSF50615 10 94 1.77E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.1E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 SUPERFAMILY SSF52540 96 381 3.8E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.651 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 1.8E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 Gene3D G3DSA:2.40.30.20 1 93 4.9E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.6E-45 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 Gene3D G3DSA:3.40.50.300 94 382 2.5E-131 T 14-10-2018 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 PIRSF PIRSF039088 1 513 1.0E-232 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 511 2.0E-259 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 SUPERFAMILY SSF47917 383 510 6.28E-46 T 14-10-2018 DDU33_03200 287e2a8c769b0f7f4506097586c6768c 513 Gene3D G3DSA:1.20.150.20 383 513 8.0E-49 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03155 ad266a780f7bb854e741feb5c99521c2 449 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 2 448 4.9E-112 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DDU33_03155 ad266a780f7bb854e741feb5c99521c2 449 Pfam PF02447 GntP family permease 1 446 5.3E-123 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DDU33_03155 ad266a780f7bb854e741feb5c99521c2 449 PIRSF PIRSF002746 1 449 4.0E-146 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1352 1440 1.4E-12 T 14-10-2018 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Pfam PF16330 MukB hinge domain 664 828 1.8E-75 T 14-10-2018 IPR032520 MukB, hinge domain DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Gene3D G3DSA:1.20.58.850 600 870 2.0E-129 T 14-10-2018 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 SUPERFAMILY SSF52540 41 241 6.99E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Gene3D G3DSA:1.20.58.850 638 848 2.0E-129 T 14-10-2018 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Gene3D G3DSA:3.40.1140.10 1399 1484 2.9E-37 T 14-10-2018 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 20 1486 11.063 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Gene3D G3DSA:1.20.1060.30 685 796 2.0E-129 T 14-10-2018 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Gene3D G3DSA:3.40.1140.10 20 244 1.8E-90 T 14-10-2018 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 Pfam PF04310 MukB N-terminal 21 244 8.0E-117 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DDU33_07435 a7d77224f695383384b0165a944b4906 1486 PIRSF PIRSF005246 20 1486 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 Gene3D G3DSA:2.60.410.10 281 372 5.7E-26 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 372 4.0E-25 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 SMART SM00936 281 372 9.0E-33 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 SUPERFAMILY SSF69189 281 374 2.55E-25 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 5.5E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 5.5E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 5.5E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 SUPERFAMILY SSF56601 10 281 6.07E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 Gene3D G3DSA:3.40.710.10 18 280 1.9E-89 T 14-10-2018 DDU33_02420 acda9dd4c85c0ac867a6bc2780e5259b 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 261 2.2E-95 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DDU33_03065 d2b9551d270aa1743a68815ffa32541b 208 Gene3D G3DSA:3.40.30.10 1 84 8.1E-36 T 14-10-2018 DDU33_03065 d2b9551d270aa1743a68815ffa32541b 208 SUPERFAMILY SSF52833 1 83 6.28E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_03065 d2b9551d270aa1743a68815ffa32541b 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 190 1.7E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal DDU33_03065 d2b9551d270aa1743a68815ffa32541b 208 SUPERFAMILY SSF47616 95 198 9.75E-14 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DDU33_03065 d2b9551d270aa1743a68815ffa32541b 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 2.2E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDU33_03065 d2b9551d270aa1743a68815ffa32541b 208 Gene3D G3DSA:1.20.1050.10 85 196 5.1E-37 T 14-10-2018 DDU33_02155 5bfe899ade3d4db99c18c565992964a3 179 Pfam PF00281 Ribosomal protein L5 24 80 8.2E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02155 5bfe899ade3d4db99c18c565992964a3 179 SUPERFAMILY SSF55282 4 179 4.47E-79 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02155 5bfe899ade3d4db99c18c565992964a3 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.741 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02155 5bfe899ade3d4db99c18c565992964a3 179 Gene3D G3DSA:3.30.1440.10 1 179 2.1E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02155 5bfe899ade3d4db99c18c565992964a3 179 PIRSF PIRSF002161 1 179 1.3E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02155 5bfe899ade3d4db99c18c565992964a3 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.0E-40 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02155 5bfe899ade3d4db99c18c565992964a3 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_08965 1ef98c07ba99e264f4d9b17bbf8c6342 74 Gene3D G3DSA:1.10.287.1040 2 73 7.8E-23 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DDU33_08965 1ef98c07ba99e264f4d9b17bbf8c6342 74 Pfam PF02609 Exonuclease VII small subunit 9 60 4.0E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDU33_08965 1ef98c07ba99e264f4d9b17bbf8c6342 74 SUPERFAMILY SSF116842 3 68 1.7E-19 T 14-10-2018 DDU33_08965 1ef98c07ba99e264f4d9b17bbf8c6342 74 PIRSF PIRSF006488 1 72 2.8E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDU33_08965 1ef98c07ba99e264f4d9b17bbf8c6342 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 1.4E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDU33_08965 1ef98c07ba99e264f4d9b17bbf8c6342 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 15.013 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDU33_08965 1ef98c07ba99e264f4d9b17bbf8c6342 74 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 49 3.0E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DDU33_03790 aa895bf6e0c5b7369a39f5a141abd23b 229 Gene3D G3DSA:2.60.120.10 7 228 2.9E-91 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_03790 aa895bf6e0c5b7369a39f5a141abd23b 229 Gene3D G3DSA:2.60.120.10 11 135 2.9E-91 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_03790 aa895bf6e0c5b7369a39f5a141abd23b 229 Pfam PF02678 Pirin 7 119 7.5E-35 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DDU33_03790 aa895bf6e0c5b7369a39f5a141abd23b 229 SUPERFAMILY SSF51182 1 228 1.17E-76 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DDU33_03790 aa895bf6e0c5b7369a39f5a141abd23b 229 PIRSF PIRSF006232 1 227 1.6E-55 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 3.3E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 3.3E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 3.3E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 3.3E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 3.3E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.5E-147 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 Pfam PF01039 Carboxyl transferase domain 96 240 4.1E-15 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 Gene3D G3DSA:3.90.226.10 25 285 2.2E-87 T 14-10-2018 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.194 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DDU33_08415 d2a31a2467572ea7a544c5e54e0d3065 295 SUPERFAMILY SSF52096 25 283 2.14E-88 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_10070 c4a01e704fb275a3988853d22eb2f9b4 322 PIRSF PIRSF005096 1 322 4.9E-97 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DDU33_10070 c4a01e704fb275a3988853d22eb2f9b4 322 SUPERFAMILY SSF74650 2 320 1.19E-92 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DDU33_10070 c4a01e704fb275a3988853d22eb2f9b4 322 Pfam PF01263 Aldose 1-epimerase 3 319 8.3E-83 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DDU33_10070 c4a01e704fb275a3988853d22eb2f9b4 322 Gene3D G3DSA:2.70.98.10 1 321 4.9E-101 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DDU33_01220 13673e0b5d17bd7c47ba3a5d3e95e60d 312 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 294 8.6E-123 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DDU33_01220 13673e0b5d17bd7c47ba3a5d3e95e60d 312 Gene3D G3DSA:3.40.50.300 11 291 1.4E-104 T 14-10-2018 DDU33_01220 13673e0b5d17bd7c47ba3a5d3e95e60d 312 Pfam PF01715 IPP transferase 41 285 9.3E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DDU33_01220 13673e0b5d17bd7c47ba3a5d3e95e60d 312 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 304 29.938 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DDU33_01220 13673e0b5d17bd7c47ba3a5d3e95e60d 312 SUPERFAMILY SSF52540 8 151 1.13E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01220 13673e0b5d17bd7c47ba3a5d3e95e60d 312 Gene3D G3DSA:1.10.20.140 114 185 1.4E-104 T 14-10-2018 DDU33_01220 13673e0b5d17bd7c47ba3a5d3e95e60d 312 SUPERFAMILY SSF52540 4 237 1.93E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Gene3D G3DSA:1.10.1160.10 266 344 4.7E-34 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 SUPERFAMILY SSF50715 345 552 1.57E-76 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Gene3D G3DSA:2.40.240.10 353 466 7.9E-46 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Gene3D G3DSA:3.40.50.620 34 251 5.5E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 32 553 1.9E-298 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 47 1.5E-7 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 214 224 1.5E-7 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 64 77 1.5E-7 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 345 532 7.1E-61 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Gene3D G3DSA:2.40.240.10 467 551 1.1E-29 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 SUPERFAMILY SSF52374 32 351 2.03E-101 T 14-10-2018 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Gene3D G3DSA:3.90.800.10 105 213 5.5E-106 T 14-10-2018 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 32 342 9.9E-124 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 49 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_08260 f59c48ed6debb871352aacc48b68cf3f 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 553 52.11 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:3.40.50.12580 703 874 2.3E-110 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SUPERFAMILY SSF48452 54 136 2.73E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:1.25.40.10 43 143 6.4E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Pfam PF00534 Glycosyl transferases group 1 1124 1256 1.6E-18 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 305 338 0.079 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 236 270 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 200 233 1.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 88 121 0.088 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 470 503 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 339 372 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 435 468 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 271 304 420.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 166 199 0.76 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SMART SM00028 54 87 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:1.25.40.10 245 404 2.6E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 531 884 3.8E-80 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SUPERFAMILY SSF53756 914 1269 1.47E-38 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:3.40.50.2000 980 1105 6.4E-36 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:3.40.50.11820 531 881 2.3E-110 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Pfam PF13432 Tetratricopeptide repeat 441 489 0.0071 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Pfam PF13432 Tetratricopeptide repeat 351 395 0.005 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Pfam PF13181 Tetratricopeptide repeat 200 230 0.017 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:1.25.40.10 418 508 1.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SUPERFAMILY SSF48452 158 393 2.17E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:3.40.50.2000 1106 1268 6.4E-36 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SUPERFAMILY SSF53756 626 886 1.97E-14 T 14-10-2018 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 Gene3D G3DSA:1.25.40.10 144 241 8.0E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02495 73ceec141e4e2f2c41281bf0ada15b92 1297 SUPERFAMILY SSF48452 372 500 2.57E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_00515 c205cf4e42aa486c244305f8f1fde4d3 345 Gene3D G3DSA:1.10.40.50 271 344 7.8E-24 T 14-10-2018 DDU33_00515 c205cf4e42aa486c244305f8f1fde4d3 345 SUPERFAMILY SSF52540 110 333 1.83E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00515 c205cf4e42aa486c244305f8f1fde4d3 345 Gene3D G3DSA:2.40.50.140 33 97 1.3E-21 T 14-10-2018 DDU33_00515 c205cf4e42aa486c244305f8f1fde4d3 345 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 38 335 36.853 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DDU33_00515 c205cf4e42aa486c244305f8f1fde4d3 345 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 71 329 1.2E-91 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DDU33_00515 c205cf4e42aa486c244305f8f1fde4d3 345 Pfam PF03193 RsgA GTPase 96 271 2.2E-57 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DDU33_00515 c205cf4e42aa486c244305f8f1fde4d3 345 Gene3D G3DSA:3.40.50.300 99 270 1.6E-51 T 14-10-2018 DDU33_08970 93ce2c4353f68f885ffa41b88f168183 299 SUPERFAMILY SSF48576 12 286 4.73E-83 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DDU33_08970 93ce2c4353f68f885ffa41b88f168183 299 Gene3D G3DSA:1.10.600.10 2 299 4.5E-96 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DDU33_08970 93ce2c4353f68f885ffa41b88f168183 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 218 230 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DDU33_08970 93ce2c4353f68f885ffa41b88f168183 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 101 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DDU33_08970 93ce2c4353f68f885ffa41b88f168183 299 Pfam PF00348 Polyprenyl synthetase 37 268 3.9E-53 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DDU33_07540 b689fec796554dbfde89721290376a0c 301 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 162 284 2.0E-37 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DDU33_07540 b689fec796554dbfde89721290376a0c 301 Gene3D G3DSA:3.40.140.10 34 184 1.2E-41 T 14-10-2018 DDU33_07540 b689fec796554dbfde89721290376a0c 301 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 65 146 1.2E-13 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DDU33_07540 b689fec796554dbfde89721290376a0c 301 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 35 299 5.3E-85 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DDU33_07540 b689fec796554dbfde89721290376a0c 301 Gene3D G3DSA:3.40.140.10 191 294 7.7E-21 T 14-10-2018 DDU33_07540 b689fec796554dbfde89721290376a0c 301 SUPERFAMILY SSF53927 158 293 7.9E-31 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDU33_07540 b689fec796554dbfde89721290376a0c 301 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 107 141 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DDU33_07540 b689fec796554dbfde89721290376a0c 301 SUPERFAMILY SSF53927 12 154 1.25E-37 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDU33_07540 b689fec796554dbfde89721290376a0c 301 Hamap MF_01558 Cytidine deaminase [cdd]. 7 301 45.784 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DDU33_07540 b689fec796554dbfde89721290376a0c 301 PIRSF PIRSF006334 19 301 3.4E-98 T 14-10-2018 DDU33_01445 f741e58235f60a93ba99130ab61f0984 389 Gene3D G3DSA:1.20.1530.10 2 389 2.1E-148 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily DDU33_01445 f741e58235f60a93ba99130ab61f0984 389 Pfam PF06965 Na+/H+ antiporter 1 7 382 4.5E-144 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DDU33_01445 f741e58235f60a93ba99130ab61f0984 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 382 3.4E-169 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DDU33_01445 f741e58235f60a93ba99130ab61f0984 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 388 23.142 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 Pfam PF08402 TOBE domain 285 366 3.1E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 SMART SM00382 34 217 2.3E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 Gene3D G3DSA:2.40.50.940 228 291 1.9E-11 T 14-10-2018 DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 SUPERFAMILY SSF52540 9 248 3.3E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 Gene3D G3DSA:2.40.50.140 292 305 1.9E-11 T 14-10-2018 DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 Pfam PF00005 ABC transporter 25 166 1.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 Gene3D G3DSA:3.40.50.300 9 227 9.0E-74 T 14-10-2018 DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 SUPERFAMILY SSF50331 242 366 5.1E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDU33_10840 dc256e21632cab41caf971f978d0d1f4 370 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 366 2.8E-163 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DDU33_05070 9ba2e305254850b9cb8ff0f4a7cdc82b 188 SMART SM00945 22 137 1.3E-50 T 14-10-2018 IPR016103 ProQ/FinO domain DDU33_05070 9ba2e305254850b9cb8ff0f4a7cdc82b 188 Hamap MF_00749 RNA chaperone ProQ [proQ]. 17 188 22.457 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 DDU33_05070 9ba2e305254850b9cb8ff0f4a7cdc82b 188 Gene3D G3DSA:1.10.1710.10 2 139 1.5E-20 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily DDU33_05070 9ba2e305254850b9cb8ff0f4a7cdc82b 188 Pfam PF04352 ProQ/FINO family 27 133 1.4E-36 T 14-10-2018 IPR016103 ProQ/FinO domain DDU33_05070 9ba2e305254850b9cb8ff0f4a7cdc82b 188 SUPERFAMILY SSF48657 12 136 7.98E-36 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily DDU33_00305 3f88fd79324d9c8d90a5652ca4cbea2c 218 SUPERFAMILY SSF50800 1 216 7.32E-54 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DDU33_00305 3f88fd79324d9c8d90a5652ca4cbea2c 218 Pfam PF03473 MOSC domain 51 163 4.8E-13 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DDU33_00305 3f88fd79324d9c8d90a5652ca4cbea2c 218 Gene3D G3DSA:2.40.33.20 1 217 6.4E-50 T 14-10-2018 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Gene3D G3DSA:1.10.10.10 335 514 5.0E-49 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Gene3D G3DSA:1.10.150.80 518 602 1.6E-27 T 14-10-2018 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 SMART SM00341 524 604 8.5E-26 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Pfam PF09382 RQC domain 400 508 7.1E-37 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Gene3D G3DSA:3.40.50.300 203 334 1.8E-44 T 14-10-2018 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Pfam PF00271 Helicase conserved C-terminal domain 219 323 4.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 SMART SM00487 16 212 1.7E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Pfam PF16124 RecQ zinc-binding 338 398 4.7E-15 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 597 6.6E-249 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 SUPERFAMILY SSF52540 9 194 8.54E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 10 458 3.3E-194 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 SUPERFAMILY SSF52540 202 451 3.45E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 SMART SM00956 405 508 3.1E-50 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 SMART SM00490 244 325 3.7E-27 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 SUPERFAMILY SSF47819 524 601 8.94E-26 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Pfam PF00570 HRDC domain 528 594 4.1E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Pfam PF00270 DEAD/DEAH box helicase 23 179 3.1E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_06435 2f194358196ed87c14d25fa8e8b04cc5 604 Gene3D G3DSA:3.40.50.300 1 202 2.5E-80 T 14-10-2018 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 PIRSF PIRSF001438 1 308 1.2E-122 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 SUPERFAMILY SSF54782 219 307 2.35E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 6.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 6.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 PRINTS PR00151 Porphobilinogen deaminase signature 142 159 6.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 6.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 PRINTS PR00151 Porphobilinogen deaminase signature 123 140 6.3E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 296 39.155 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 294 3.2E-22 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 Gene3D G3DSA:3.40.190.10 5 209 3.1E-85 T 14-10-2018 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 SUPERFAMILY SSF53850 4 217 5.89E-87 T 14-10-2018 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 296 2.0E-115 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 Gene3D G3DSA:3.40.190.10 102 201 3.1E-85 T 14-10-2018 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 Gene3D G3DSA:3.30.160.40 220 305 4.9E-30 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06815 fb9efcd4152b44e38ce47c78f9d47302 308 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 211 9.9E-80 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 SUPERFAMILY SSF52540 3 230 4.26E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 SMART SM00382 277 471 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 SMART SM00382 29 219 2.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 SUPERFAMILY SSF52540 249 482 6.35E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 Gene3D G3DSA:3.40.50.300 1 247 5.9E-54 T 14-10-2018 DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 Gene3D G3DSA:3.40.50.300 248 495 1.2E-49 T 14-10-2018 DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 Pfam PF00005 ABC transporter 269 422 1.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_03230 79e02db1bb516c12150f2bf62e12fc19 499 Pfam PF00005 ABC transporter 20 169 2.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 Pfam PF02384 N-6 DNA Methylase 162 468 3.3E-107 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 Pfam PF12161 HsdM N-terminal domain 9 146 6.5E-22 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 285 297 4.3E-14 T 14-10-2018 DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 184 200 4.3E-14 T 14-10-2018 DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 4.3E-14 T 14-10-2018 DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 SUPERFAMILY SSF53335 7 503 8.1E-138 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 Gene3D G3DSA:3.40.50.150 182 463 1.4E-88 T 14-10-2018 DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 483 2.4E-87 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 DDU33_02910 25eeddc8c43f50d9df066a4a74223857 503 Gene3D G3DSA:1.20.1260.30 2 178 1.0E-36 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily DDU33_05665 94dfc52b5a40bd0e09fd5e014e010891 65 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 14 60 1.0E-5 T 14-10-2018 DDU33_05665 94dfc52b5a40bd0e09fd5e014e010891 65 Pfam PF13617 YnbE-like lipoprotein 4 58 4.4E-22 T 14-10-2018 IPR025985 YnbE-like lipoprotein DDU33_06850 94a114e48bd3d880752fbe5666a50ae9 213 SUPERFAMILY SSF53271 2 205 4.97E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_06850 94a114e48bd3d880752fbe5666a50ae9 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 33.416 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_06850 94a114e48bd3d880752fbe5666a50ae9 213 Pfam PF00156 Phosphoribosyl transferase domain 47 161 1.6E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDU33_06850 94a114e48bd3d880752fbe5666a50ae9 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.3E-66 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_06850 94a114e48bd3d880752fbe5666a50ae9 213 Gene3D G3DSA:3.40.50.2020 1 213 4.0E-75 T 14-10-2018 DDU33_08540 78925c7c827bea6594a4db1884cdec29 171 SUPERFAMILY SSF54001 51 171 4.58E-41 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DDU33_08540 78925c7c827bea6594a4db1884cdec29 171 Gene3D G3DSA:3.90.1720.10 51 171 1.2E-41 T 14-10-2018 DDU33_08540 78925c7c827bea6594a4db1884cdec29 171 Pfam PF00877 NlpC/P60 family 64 170 9.8E-33 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 SUPERFAMILY SSF111304 3 199 4.32E-71 T 14-10-2018 IPR023627 Recombination protein RecR DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.5E-78 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 Pfam PF13662 Toprim domain 82 172 1.5E-19 T 14-10-2018 IPR006171 TOPRIM domain DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 SMART SM00493 81 166 6.8E-15 T 14-10-2018 IPR006171 TOPRIM domain DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.539 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 Gene3D G3DSA:1.10.8.420 1 52 3.3E-18 T 14-10-2018 DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 Gene3D G3DSA:3.40.1360.10 78 199 5.1E-39 T 14-10-2018 DDU33_00545 cbc889466abb8cad361fe03a2b3682e7 201 Pfam PF02132 RecR protein 42 77 1.1E-14 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DDU33_07735 244df3ebd83b0bf08cfa8f7de5a2d8b5 365 Pfam PF00155 Aminotransferase class I and II 33 355 2.9E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDU33_07735 244df3ebd83b0bf08cfa8f7de5a2d8b5 365 Gene3D G3DSA:3.90.1150.10 24 357 1.3E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_07735 244df3ebd83b0bf08cfa8f7de5a2d8b5 365 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 223 236 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DDU33_07735 244df3ebd83b0bf08cfa8f7de5a2d8b5 365 Gene3D G3DSA:3.40.640.10 47 271 1.3E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_07735 244df3ebd83b0bf08cfa8f7de5a2d8b5 365 SUPERFAMILY SSF53383 9 359 3.81E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_07735 244df3ebd83b0bf08cfa8f7de5a2d8b5 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 360 3.6E-119 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DDU33_07735 244df3ebd83b0bf08cfa8f7de5a2d8b5 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 363 61.844 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DDU33_01150 e982db80fc8fe1b815372732e0ffd7bd 476 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 5 474 3.1E-211 T 14-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 DDU33_01150 e982db80fc8fe1b815372732e0ffd7bd 476 Pfam PF00474 Sodium:solute symporter family 37 434 2.4E-121 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DDU33_01150 e982db80fc8fe1b815372732e0ffd7bd 476 Gene3D G3DSA:1.20.1730.10 24 475 1.7E-79 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DDU33_01150 e982db80fc8fe1b815372732e0ffd7bd 476 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 37 434 1.6E-98 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 SUPERFAMILY SSF109604 339 498 2.3E-17 T 14-10-2018 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 3.2E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 3.2E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 3.2E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 3.2E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 3.2E-37 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 2.8E-212 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.677 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 Pfam PF05746 DALR anticodon binding domain 582 679 8.1E-7 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DDU33_01630 83b32e27826eaca8bdc4837637a00dd2 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01575 4d01fb5558dc438ea632af801647f8ce 155 Gene3D G3DSA:2.60.120.370 1 152 7.1E-41 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily DDU33_01575 4d01fb5558dc438ea632af801647f8ce 155 SUPERFAMILY SSF51197 1 151 6.04E-40 T 14-10-2018 DDU33_01575 4d01fb5558dc438ea632af801647f8ce 155 Pfam PF04074 Domain of unknown function (DUF386) 1 148 2.0E-40 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family DDU33_01575 4d01fb5558dc438ea632af801647f8ce 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 151 1.4E-41 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 8.7E-76 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 Gene3D G3DSA:3.40.50.300 8 183 1.3E-73 T 14-10-2018 DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 Gene3D G3DSA:3.30.63.10 37 96 1.3E-73 T 14-10-2018 DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.644 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 SUPERFAMILY SSF52540 4 189 1.19E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 SMART SM00072 3 187 8.2E-73 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DDU33_06730 326594b50bae5ce47fbd89aa17d1e254 207 Pfam PF00625 Guanylate kinase 5 185 1.2E-63 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DDU33_03180 8eb91548866655fd74c103092026803d 262 PRINTS PR00123 ATP synthase A subunit signature 88 104 1.6E-12 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 PRINTS PR00123 ATP synthase A subunit signature 240 255 1.6E-12 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 PRINTS PR00123 ATP synthase A subunit signature 186 208 1.6E-12 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 ProSitePatterns PS00449 ATP synthase a subunit signature. 189 198 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 20 256 8.5E-52 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 Pfam PF00119 ATP synthase A chain 31 254 1.1E-56 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 SUPERFAMILY SSF81336 81 254 1.06E-43 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 260 15.346 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03180 8eb91548866655fd74c103092026803d 262 Gene3D G3DSA:1.20.120.220 79 260 1.3E-57 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1340 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:2.40.270.10 1009 1243 7.1E-90 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Pfam PF04561 RNA polymerase Rpb2, domain 2 351 455 6.3E-16 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 276 4.1E-8 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Pfam PF04563 RNA polymerase beta subunit 26 501 3.1E-49 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:2.40.50.100 716 790 5.3E-31 T 14-10-2018 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1343 12.298 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Pfam PF00562 RNA polymerase Rpb2, domain 6 719 1265 8.0E-157 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Pfam PF04560 RNA polymerase Rpb2, domain 7 1267 1341 1.6E-25 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:3.90.1100.10 649 715 1.3E-20 T 14-10-2018 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:2.40.50.150 835 956 2.3E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 SUPERFAMILY SSF64484 12 1340 0.0 T 14-10-2018 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:3.90.1800.10 1253 1339 7.2E-11 T 14-10-2018 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Pfam PF04565 RNA polymerase Rpb2, domain 3 514 581 2.6E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:2.40.270.10 792 834 6.2E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:3.90.1110.10 157 285 6.0E-29 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:3.90.1110.10 315 442 1.1E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:3.90.1100.10 19 156 5.2E-47 T 14-10-2018 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Gene3D G3DSA:3.90.1100.10 443 628 1.9E-69 T 14-10-2018 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 Pfam PF10385 RNA polymerase beta subunit external 1 domain 592 658 3.4E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_03495 d6815faf1ea363d1b12f75461410357c 1343 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1065 1077 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 Gene3D G3DSA:3.40.50.300 1 285 3.9E-134 T 14-10-2018 DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 SUPERFAMILY SSF52540 3 269 4.25E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 SUPERFAMILY SSF52317 289 542 4.28E-89 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.517 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.2E-62 T 14-10-2018 IPR017926 Glutamine amidotransferase DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 4.9E-264 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 Pfam PF06418 CTP synthase N-terminus 5 266 1.5E-125 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DDU33_04885 6e6befa08e73ba46aa84b9a11e6005ce 544 Gene3D G3DSA:3.40.50.880 286 544 4.2E-107 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_01040 b70e6af6f3420642014205243fc3b703 160 SUPERFAMILY SSF54106 115 159 1.44E-7 T 14-10-2018 DDU33_01040 b70e6af6f3420642014205243fc3b703 160 SMART SM00257 116 160 5.8E-8 T 14-10-2018 IPR018392 LysM domain DDU33_01040 b70e6af6f3420642014205243fc3b703 160 Pfam PF01476 LysM domain 117 159 2.5E-8 T 14-10-2018 IPR018392 LysM domain DDU33_01040 b70e6af6f3420642014205243fc3b703 160 Gene3D G3DSA:3.10.350.10 112 160 1.4E-9 T 14-10-2018 IPR036779 LysM domain superfamily DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 Pfam PF12833 Helix-turn-helix domain 209 285 3.4E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 SUPERFAMILY SSF46689 187 236 2.13E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 Gene3D G3DSA:1.10.10.60 183 290 7.0E-29 T 14-10-2018 DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 5.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 5.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 24 174 3.5E-41 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 SMART SM00342 203 286 6.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_07010 280af0cfe70cbf0b685f32ea4365a8e8 297 SUPERFAMILY SSF46689 239 284 1.03E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 Pfam PF00005 ABC transporter 22 163 2.2E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 SMART SM00382 30 213 2.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 Gene3D G3DSA:2.40.50.940 224 281 3.2E-7 T 14-10-2018 DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 SUPERFAMILY SSF52540 6 242 1.6E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 SUPERFAMILY SSF50331 241 345 2.81E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 Gene3D G3DSA:3.40.50.300 6 223 2.2E-67 T 14-10-2018 DDU33_01810 c560a434f04a0a3a757d2b82aeb9d2af 348 Gene3D G3DSA:2.40.50.140 282 324 3.2E-7 T 14-10-2018 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 Gene3D G3DSA:1.10.8.50 133 271 2.9E-45 T 14-10-2018 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 SUPERFAMILY SSF81624 2 140 3.92E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 SMART SM01232 131 223 1.1E-42 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 2.1E-96 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 SMART SM00898 2 117 9.1E-47 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 SUPERFAMILY SSF46946 132 224 2.09E-28 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 Pfam PF06827 Zinc finger found in FPG and IleRS 243 271 5.0E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.6E-26 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 SUPERFAMILY SSF57716 219 271 1.56E-17 T 14-10-2018 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 42.593 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 Gene3D G3DSA:3.20.190.10 2 130 6.2E-39 T 14-10-2018 IPR035937 MutM-like, N-terminal DDU33_04305 6f2fde7bb8f46a39d499213b42c93a2c 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 116 5.4E-30 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 29.93 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 Pfam PF01245 Ribosomal protein L19 3 113 7.8E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 PIRSF PIRSF002191 1 116 7.8E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.1E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.1E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.1E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 SUPERFAMILY SSF50104 2 114 1.6E-46 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.1E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02030 f8de3916d240ed62985e6900c3aee6a1 116 Gene3D G3DSA:2.30.30.790 3 115 2.6E-18 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 485 6.6E-117 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 189 1.2E-58 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 SUPERFAMILY SSF55347 179 485 6.54E-114 T 14-10-2018 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 Gene3D G3DSA:3.40.50.720 3 177 4.9E-56 T 14-10-2018 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 486 90.225 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 Gene3D G3DSA:3.30.360.10 178 486 9.1E-126 T 14-10-2018 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 5 486 7.4E-208 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 PIRSF PIRSF000110 1 488 2.6E-180 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DDU33_00625 e28df73ec6c5ceb1404c8e7c43fb7b66 495 SUPERFAMILY SSF51735 4 192 4.59E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 Gene3D G3DSA:3.40.50.1100 11 206 1.0E-182 T 14-10-2018 DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 PIRSF PIRSF001413 2 398 5.7E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 53 379 1.2E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 Gene3D G3DSA:3.40.50.1100 55 385 1.0E-182 T 14-10-2018 DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 392 49.151 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 390 5.8E-191 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 81 95 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DDU33_09800 83c66b6da5b75c6c2921102ccd397bca 398 SUPERFAMILY SSF53686 7 391 1.02E-143 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDU33_03025 a9355a0de2c2774bae79be7f9be107f0 403 SUPERFAMILY SSF51395 1 334 2.63E-99 T 14-10-2018 DDU33_03025 a9355a0de2c2774bae79be7f9be107f0 403 Gene3D G3DSA:3.20.20.70 1 347 4.2E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_03025 a9355a0de2c2774bae79be7f9be107f0 403 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 335 1.4E-60 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDU33_06335 968a291a72272afd1ed1eb8a28118344 645 Gene3D G3DSA:2.40.170.20 162 645 3.4E-88 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DDU33_06335 968a291a72272afd1ed1eb8a28118344 645 Gene3D G3DSA:2.170.130.10 20 155 5.9E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_06335 968a291a72272afd1ed1eb8a28118344 645 Pfam PF00593 TonB dependent receptor 185 642 2.7E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DDU33_06335 968a291a72272afd1ed1eb8a28118344 645 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 150 1.2E-26 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_06335 968a291a72272afd1ed1eb8a28118344 645 SUPERFAMILY SSF56935 36 645 1.1E-102 T 14-10-2018 DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 Pfam PF00677 Lumazine binding domain 3 86 2.3E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 Pfam PF00677 Lumazine binding domain 99 183 5.3E-27 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 SUPERFAMILY SSF63380 1 89 2.81E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 PIRSF PIRSF000498 1 210 4.7E-80 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 SUPERFAMILY SSF63380 92 193 5.7E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 Gene3D G3DSA:2.40.30.20 101 204 6.6E-36 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 2.7E-77 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DDU33_07025 7559dbefa26d23fcba2c64c190a1edcf 215 Gene3D G3DSA:2.40.30.20 1 88 8.8E-33 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 Gene3D G3DSA:3.40.50.970 1 174 6.2E-73 T 14-10-2018 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 Gene3D G3DSA:3.40.50.1220 189 360 8.8E-61 T 14-10-2018 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 542 1.1E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 566 4.8E-277 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 329 3.3E-45 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 3.2E-60 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 SUPERFAMILY SSF52467 188 361 2.58E-62 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 SUPERFAMILY SSF52518 1 177 5.64E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 SUPERFAMILY SSF52518 371 566 1.55E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_09040 3b426063deb43f1e663963da6240c1a3 573 Gene3D G3DSA:3.40.50.970 363 573 7.0E-66 T 14-10-2018 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 PIRSF PIRSF001553 1 289 8.5E-136 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 Pfam PF02629 CoA binding domain 6 99 4.0E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 SUPERFAMILY SSF51735 1 122 2.34E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 Gene3D G3DSA:3.40.50.261 124 289 5.9E-77 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 SUPERFAMILY SSF52210 123 288 2.22E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.209 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 Gene3D G3DSA:3.40.50.720 2 123 1.1E-52 T 14-10-2018 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 3.6E-41 T 14-10-2018 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 3.6E-41 T 14-10-2018 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.6E-41 T 14-10-2018 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 3.6E-41 T 14-10-2018 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 Pfam PF00549 CoA-ligase 151 271 3.1E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 SMART SM00881 4 100 5.6E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DDU33_09915 d4d6b3f7a39eb0a552cc159c35cb327a 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.7E-147 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_04420 be7931c48f0643e6c150af273f87408e 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 4.7E-144 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDU33_04420 be7931c48f0643e6c150af273f87408e 316 Gene3D G3DSA:3.40.47.10 171 316 1.9E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_04420 be7931c48f0643e6c150af273f87408e 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 4.1E-37 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDU33_04420 be7931c48f0643e6c150af273f87408e 316 Gene3D G3DSA:3.40.47.10 1 170 3.6E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_04420 be7931c48f0643e6c150af273f87408e 316 SUPERFAMILY SSF53901 3 316 1.06E-68 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DDU33_04420 be7931c48f0643e6c150af273f87408e 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 68.091 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDU33_04420 be7931c48f0643e6c150af273f87408e 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 181 2.4E-30 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DDU33_06045 c6630aaa53e14b3a06032f0d799173a2 132 Pfam PF03061 Thioesterase superfamily 15 95 2.8E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDU33_06045 c6630aaa53e14b3a06032f0d799173a2 132 SUPERFAMILY SSF54637 3 128 8.61E-41 T 14-10-2018 IPR029069 HotDog domain superfamily DDU33_06045 c6630aaa53e14b3a06032f0d799173a2 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 4 119 4.8E-42 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DDU33_06045 c6630aaa53e14b3a06032f0d799173a2 132 PIRSF PIRSF003230 1 131 6.8E-50 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DDU33_06045 c6630aaa53e14b3a06032f0d799173a2 132 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 6 23 - T 14-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 DDU33_06045 c6630aaa53e14b3a06032f0d799173a2 132 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 3 124 1.7E-50 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 DDU33_06045 c6630aaa53e14b3a06032f0d799173a2 132 Gene3D G3DSA:3.10.129.10 1 131 2.8E-40 T 14-10-2018 DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 14-10-2018 DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 266 1.6E-60 T 14-10-2018 DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 14-10-2018 DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 Gene3D G3DSA:3.40.50.1000 5 266 3.8E-61 T 14-10-2018 IPR023214 HAD superfamily DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 239 4.9E-22 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 Gene3D G3DSA:3.30.1240.10 84 195 3.8E-61 T 14-10-2018 DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 SUPERFAMILY SSF56784 1 270 2.42E-65 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_07335 429c22dc77c8e02098e6182336e393a7 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 264 1.0E-59 T 14-10-2018 IPR000150 Cof family GO:0016787 DDU33_00085 5be57ef8535c34aecbb5535c8dd01d41 149 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 6 143 1.2E-63 T 14-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 DDU33_00085 5be57ef8535c34aecbb5535c8dd01d41 149 Pfam PF01618 MotA/TolQ/ExbB proton channel family 50 141 1.4E-27 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF13332 Haemagluttinin repeat 3252 3415 1.9E-32 T 14-10-2018 IPR025157 Hemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF13332 Haemagluttinin repeat 3005 3142 6.1E-6 T 14-10-2018 IPR025157 Hemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 6.4E-9 T 14-10-2018 IPR024973 ESPR domain DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 808 864 1.4 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1228 1279 0.3 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 919 985 63.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1496 1561 0.13 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 258 341 0.064 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1029 1074 0.022 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1569 1632 0.0057 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1681 1726 0.088 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 2391 2423 2.3 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1281 1314 0.0061 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 552 613 4.3E-7 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1448 1493 0.023 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05594 Haemagluttinin repeat 1115 1185 1.3 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 679 716 3.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 588 628 0.018 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1265 1306 3.9E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1228 1263 0.0075 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1844 1886 0.18 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1565 1601 6.8E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 661 696 0.038 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1453 1493 7.7E-8 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1035 1075 0.0058 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1729 1768 2.5E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1925 1963 0.73 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1436 1472 3.4E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1307 1346 7.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 807 843 8.3E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1121 1156 6.9E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2393 2423 0.046 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1143 1176 0.24 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1645 1685 0.0074 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 766 799 0.12 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1088 1119 8.9E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 553 587 5.8E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1809 1842 0.01 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 873 903 0.18 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1603 1643 0.0031 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1687 1727 0.84 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1394 1429 0.032 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1016 1054 0.014 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 891 928 3.7E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1183 1220 0.014 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1523 1562 0.24 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1473 1500 0.37 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1245 1284 4.7E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 SUPERFAMILY SSF51126 79 384 5.96E-63 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Pfam PF05860 haemagglutination activity domain 75 208 2.5E-32 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 204 1.2E-19 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 Gene3D G3DSA:2.160.20.10 76 379 5.4E-107 T 14-10-2018 IPR012334 Pectin lyase fold DDU33_07285 66e01ef22326df799bdde40040b6ff55 4159 SMART SM00912 89 209 8.5E-50 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 SUPERFAMILY SSF88946 47 159 2.35E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 PRINTS PR00046 Major sigma-70 factor signature 287 302 1.6E-16 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 PRINTS PR00046 Major sigma-70 factor signature 302 313 1.6E-16 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 PRINTS PR00046 Major sigma-70 factor signature 114 127 1.6E-16 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 PRINTS PR00046 Major sigma-70 factor signature 268 280 1.6E-16 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 51 318 2.2E-125 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 316 3.1E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 Pfam PF00140 Sigma-70 factor, region 1.2 53 77 5.8E-5 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 Gene3D G3DSA:1.20.140.160 170 319 2.9E-15 T 14-10-2018 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 33 319 51.835 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 Pfam PF04542 Sigma-70 region 2 90 159 1.6E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 SUPERFAMILY SSF88659 225 317 2.24E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 Pfam PF04545 Sigma-70, region 4 264 314 7.6E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DDU33_00830 5e0fca896dca263bb9503f2ba11cac83 321 Gene3D G3DSA:1.10.601.10 3 162 4.9E-28 T 14-10-2018 DDU33_01185 38ef2a5fc7137991a516a82389ef2a03 266 SMART SM00382 37 232 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_01185 38ef2a5fc7137991a516a82389ef2a03 266 Gene3D G3DSA:3.40.50.300 4 265 4.4E-67 T 14-10-2018 DDU33_01185 38ef2a5fc7137991a516a82389ef2a03 266 SUPERFAMILY SSF52540 9 238 1.17E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01185 38ef2a5fc7137991a516a82389ef2a03 266 Pfam PF00005 ABC transporter 28 176 2.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_05870 d5ca3342a71d7f1c2a8fc597940dfa9f 654 Pfam PF01032 FecCD transport family 354 653 8.9E-76 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DDU33_05870 d5ca3342a71d7f1c2a8fc597940dfa9f 654 Pfam PF01032 FecCD transport family 17 322 8.5E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DDU33_05870 d5ca3342a71d7f1c2a8fc597940dfa9f 654 SUPERFAMILY SSF81345 338 653 7.45E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_05870 d5ca3342a71d7f1c2a8fc597940dfa9f 654 SUPERFAMILY SSF81345 8 322 4.71E-55 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_05870 d5ca3342a71d7f1c2a8fc597940dfa9f 654 Gene3D G3DSA:1.10.3470.10 3 327 3.3E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_05870 d5ca3342a71d7f1c2a8fc597940dfa9f 654 Gene3D G3DSA:1.10.3470.10 333 654 4.1E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_03525 ffb5da64f1c101594e16c04501f0518b 214 PIRSF PIRSF028788 1 212 2.4E-32 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type DDU33_03525 ffb5da64f1c101594e16c04501f0518b 214 Pfam PF04994 TfoX C-terminal domain 119 196 1.2E-18 T 14-10-2018 IPR007077 TfoX, C-terminal DDU33_03525 ffb5da64f1c101594e16c04501f0518b 214 SUPERFAMILY SSF159894 7 106 8.11E-19 T 14-10-2018 DDU33_03525 ffb5da64f1c101594e16c04501f0518b 214 Gene3D G3DSA:3.30.1460.30 5 107 1.2E-13 T 14-10-2018 DDU33_03525 ffb5da64f1c101594e16c04501f0518b 214 Pfam PF04993 TfoX N-terminal domain 13 104 4.3E-17 T 14-10-2018 IPR007076 TfoX, N-terminal DDU33_03525 ffb5da64f1c101594e16c04501f0518b 214 Gene3D G3DSA:1.10.150.20 117 203 5.2E-10 T 14-10-2018 DDU33_06380 2e3a1b5dbb809f6537f86d3d198eaa29 699 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 670 4.5E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_06380 2e3a1b5dbb809f6537f86d3d198eaa29 699 Gene3D G3DSA:3.30.565.10 2 200 1.3E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_06380 2e3a1b5dbb809f6537f86d3d198eaa29 699 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 152 2.3E-25 T 14-10-2018 DDU33_06380 2e3a1b5dbb809f6537f86d3d198eaa29 699 Gene3D G3DSA:3.30.565.10 530 686 1.7E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_06380 2e3a1b5dbb809f6537f86d3d198eaa29 699 SMART SM00387 574 698 1.0E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_06380 2e3a1b5dbb809f6537f86d3d198eaa29 699 SUPERFAMILY SSF55874 10 194 7.47E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_06380 2e3a1b5dbb809f6537f86d3d198eaa29 699 SUPERFAMILY SSF55874 537 671 3.14E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 Pfam PF05193 Peptidase M16 inactive domain 195 373 8.5E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 Pfam PF05193 Peptidase M16 inactive domain 691 844 1.1E-6 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 Gene3D G3DSA:3.30.830.10 22 243 3.3E-55 T 14-10-2018 DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 SUPERFAMILY SSF63411 505 719 1.49E-5 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 SUPERFAMILY SSF63411 327 461 1.92E-7 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 56 79 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 Gene3D G3DSA:3.30.830.10 278 454 6.1E-12 T 14-10-2018 DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 Gene3D G3DSA:3.30.830.10 731 914 6.8E-16 T 14-10-2018 DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 SUPERFAMILY SSF63411 740 912 6.46E-13 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 Pfam PF00675 Insulinase (Peptidase family M16) 46 154 1.5E-19 T 14-10-2018 IPR011765 Peptidase M16, N-terminal DDU33_02060 50e903b3a05282813fc287a4ef5aa7e8 915 SUPERFAMILY SSF63411 11 243 1.15E-40 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DDU33_00285 f76847283d7cb7ab8ff34510af1f974d 151 Pfam PF01797 Transposase IS200 like 4 118 2.9E-26 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DDU33_00285 f76847283d7cb7ab8ff34510af1f974d 151 SMART SM01321 3 118 4.0E-26 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DDU33_00285 f76847283d7cb7ab8ff34510af1f974d 151 Gene3D G3DSA:3.30.70.1290 1 126 1.3E-26 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DDU33_00285 f76847283d7cb7ab8ff34510af1f974d 151 SUPERFAMILY SSF143422 2 120 5.89E-31 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 SUPERFAMILY SSF52540 81 365 7.39E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 SMART SM00487 27 229 9.0E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 Pfam PF00271 Helicase conserved C-terminal domain 242 347 5.0E-28 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 SMART SM00490 266 347 1.9E-31 T 14-10-2018 IPR001650 Helicase, C-terminal DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 159 167 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 8 433 48.874 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 Gene3D G3DSA:3.40.50.300 1 216 4.8E-71 T 14-10-2018 DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 Pfam PF00270 DEAD/DEAH box helicase 33 196 4.2E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DDU33_01080 356bac45d8872dffacd61df79c9d94dd 443 Gene3D G3DSA:3.40.50.300 221 441 6.7E-50 T 14-10-2018 DDU33_05015 d3f43fd3d3e68042bb6170e97c17a6ea 163 SUPERFAMILY SSF89963 2 89 3.14E-30 T 14-10-2018 IPR036183 YajQ-like superfamily DDU33_05015 d3f43fd3d3e68042bb6170e97c17a6ea 163 Gene3D G3DSA:3.30.70.860 97 163 1.4E-32 T 14-10-2018 IPR035571 UPF0234-like, C-terminal DDU33_05015 d3f43fd3d3e68042bb6170e97c17a6ea 163 SUPERFAMILY SSF89963 92 163 6.28E-30 T 14-10-2018 IPR036183 YajQ-like superfamily DDU33_05015 d3f43fd3d3e68042bb6170e97c17a6ea 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.855 T 14-10-2018 IPR007551 Protein of unknown function DUF520 DDU33_05015 d3f43fd3d3e68042bb6170e97c17a6ea 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 9.9E-66 T 14-10-2018 IPR007551 Protein of unknown function DUF520 DDU33_05015 d3f43fd3d3e68042bb6170e97c17a6ea 163 Gene3D G3DSA:3.30.70.990 9 96 6.6E-35 T 14-10-2018 IPR035570 UPF0234, N-terminal DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 SUPERFAMILY SSF90123 7 327 6.15E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 SMART SM00382 368 555 2.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 SUPERFAMILY SSF52540 330 580 2.36E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 Gene3D G3DSA:1.20.1560.10 2 328 4.6E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 580 3.0E-238 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 Pfam PF00005 ABC transporter 359 509 4.9E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 Pfam PF00664 ABC transporter transmembrane region 27 297 4.8E-58 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10300 2cd8f7a09bbbe706f1db643ebee45031 581 Gene3D G3DSA:3.40.50.300 329 581 1.3E-97 T 14-10-2018 DDU33_07770 087ca7cca961aa523ab2828f9efec46f 229 SUPERFAMILY SSF47413 2 67 1.07E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_07770 087ca7cca961aa523ab2828f9efec46f 229 Pfam PF00717 Peptidase S24-like 140 206 3.4E-16 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DDU33_07770 087ca7cca961aa523ab2828f9efec46f 229 Pfam PF01381 Helix-turn-helix 8 61 2.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_07770 087ca7cca961aa523ab2828f9efec46f 229 SUPERFAMILY SSF51306 92 219 8.11E-23 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DDU33_07770 087ca7cca961aa523ab2828f9efec46f 229 SMART SM00530 7 61 1.2E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_07770 087ca7cca961aa523ab2828f9efec46f 229 Gene3D G3DSA:2.10.109.10 107 224 3.8E-13 T 14-10-2018 DDU33_07770 087ca7cca961aa523ab2828f9efec46f 229 Gene3D G3DSA:1.10.260.40 1 69 9.4E-22 T 14-10-2018 DDU33_09490 bb02e8d4895e19b92236b66bc7fe55e9 317 Gene3D G3DSA:3.10.50.40 171 272 6.6E-57 T 14-10-2018 DDU33_09490 bb02e8d4895e19b92236b66bc7fe55e9 317 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 209 230 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DDU33_09490 bb02e8d4895e19b92236b66bc7fe55e9 317 Gene3D G3DSA:1.10.4030.30 29 294 6.6E-57 T 14-10-2018 DDU33_09490 bb02e8d4895e19b92236b66bc7fe55e9 317 Pfam PF09312 SurA N-terminal domain 28 133 8.4E-13 T 14-10-2018 IPR015391 SurA N-terminal DDU33_09490 bb02e8d4895e19b92236b66bc7fe55e9 317 Pfam PF00639 PPIC-type PPIASE domain 177 270 6.6E-25 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DDU33_09490 bb02e8d4895e19b92236b66bc7fe55e9 317 SUPERFAMILY SSF54534 170 272 2.94E-29 T 14-10-2018 DDU33_09490 bb02e8d4895e19b92236b66bc7fe55e9 317 SUPERFAMILY SSF109998 29 195 8.63E-31 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 21 435 4.6E-107 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 Gene3D G3DSA:1.10.3550.10 104 428 7.2E-101 T 14-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 Gene3D G3DSA:1.10.3210.10 21 229 7.2E-101 T 14-10-2018 DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 Pfam PF01966 HD domain 56 126 1.5E-9 T 14-10-2018 IPR006674 HD domain DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 SUPERFAMILY SSF109604 21 435 1.26E-63 T 14-10-2018 DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 Gene3D G3DSA:1.10.3410.10 230 342 7.2E-101 T 14-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 Pfam PF13286 Phosphohydrolase-associated domain 332 432 2.2E-5 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain DDU33_03295 c61055706fb5b0c7cf841eff40d3a9b8 440 SMART SM00471 52 246 9.4E-11 T 14-10-2018 IPR003607 HD/PDEase domain DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 6.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 6.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 6.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 6.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 6.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 SUPERFAMILY SSF51735 2 233 1.78E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 Gene3D G3DSA:3.40.50.720 4 236 2.9E-62 T 14-10-2018 DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDU33_09805 2995fbcc2dfa3b71a52e43ef14ee6cfb 250 Pfam PF00106 short chain dehydrogenase 2 187 3.1E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_09300 656ca5b5fd949712f781392b0e1aa1ac 82 Pfam PF04221 RelB antitoxin 2 77 4.6E-17 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ DDU33_09300 656ca5b5fd949712f781392b0e1aa1ac 82 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 70 1.7E-18 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ DDU33_09300 656ca5b5fd949712f781392b0e1aa1ac 82 Gene3D G3DSA:1.10.1220.10 1 80 2.4E-30 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDU33_10520 2cbf10334596ab1c68d15d54ce77a8e3 593 Gene3D G3DSA:3.20.70.20 55 572 2.0E-33 T 14-10-2018 DDU33_10520 2cbf10334596ab1c68d15d54ce77a8e3 593 SUPERFAMILY SSF51998 52 573 3.97E-101 T 14-10-2018 DDU33_10520 2cbf10334596ab1c68d15d54ce77a8e3 593 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 46 589 4.8E-114 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 DDU33_10520 2cbf10334596ab1c68d15d54ce77a8e3 593 TIGRFAM TIGR02827 RNR_anaer_Bdell: anaerobic ribonucleoside-triphosphate reductase 3 588 0.0 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 DDU33_07005 a04843fbabdc16cd336d2be5e3aadcda 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 135 2.0E-46 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DDU33_07005 a04843fbabdc16cd336d2be5e3aadcda 143 Pfam PF02566 OsmC-like protein 40 133 1.6E-17 T 14-10-2018 IPR003718 OsmC/Ohr family DDU33_07005 a04843fbabdc16cd336d2be5e3aadcda 143 Gene3D G3DSA:2.20.25.10 1 42 6.9E-8 T 14-10-2018 DDU33_07005 a04843fbabdc16cd336d2be5e3aadcda 143 Gene3D G3DSA:3.30.300.20 43 139 3.0E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_07005 a04843fbabdc16cd336d2be5e3aadcda 143 SUPERFAMILY SSF82784 1 136 3.27E-37 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DDU33_04825 dc46e6ecabbc61ee003c2bcd22ecfd10 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.675 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDU33_04825 dc46e6ecabbc61ee003c2bcd22ecfd10 284 Pfam PF00793 DAHP synthetase I family 10 275 2.7E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDU33_04825 dc46e6ecabbc61ee003c2bcd22ecfd10 284 SUPERFAMILY SSF51569 3 278 2.29E-107 T 14-10-2018 DDU33_04825 dc46e6ecabbc61ee003c2bcd22ecfd10 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.4E-125 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDU33_04825 dc46e6ecabbc61ee003c2bcd22ecfd10 284 Gene3D G3DSA:3.20.20.70 1 284 9.2E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 SUPERFAMILY SSF51556 137 572 5.53E-196 T 14-10-2018 IPR032466 Metal-dependent hydrolase DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 Hamap MF_01953 Urease subunit alpha [ureC]. 3 572 56.834 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 Gene3D G3DSA:2.30.40.10 5 485 1.4E-288 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 Gene3D G3DSA:3.20.20.140 136 569 1.4E-288 T 14-10-2018 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 SUPERFAMILY SSF51338 429 482 3.11E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 125 1.7E-51 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 4.1E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 302 319 4.1E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 4.1E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 341 357 4.1E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 5 572 2.3E-287 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 ProSitePatterns PS00145 Urease active site. 324 340 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 Pfam PF01979 Amidohydrolase family 132 458 2.0E-83 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 SUPERFAMILY SSF51338 4 184 1.36E-54 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DDU33_02685 b3bfdf8c079c92554113d406fe4fdc5a 572 ProSitePatterns PS01120 Urease nickel ligands signature. 134 147 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 289 733 7.4E-176 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 Gene3D G3DSA:3.20.20.140 1 268 3.2E-85 T 14-10-2018 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 SUPERFAMILY SSF89550 5 261 2.59E-9 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 Pfam PF02811 PHP domain 7 168 2.6E-39 T 14-10-2018 IPR004013 PHP domain GO:0003824 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 Gene3D G3DSA:1.10.10.1600 431 508 4.4E-35 T 14-10-2018 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 Gene3D G3DSA:2.40.50.140 977 1070 7.9E-8 T 14-10-2018 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 SMART SM00481 6 73 6.4E-19 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 Pfam PF14579 Helix-hairpin-helix motif 806 895 1.1E-23 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1028 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_06310 6b17cb58a47ffd625c00d1b54ee82ea3 1157 Pfam PF01336 OB-fold nucleic acid binding domain 991 1067 8.9E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 Gene3D G3DSA:1.10.441.10 151 308 8.3E-108 T 14-10-2018 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PIRSF PIRSF001480 1 401 6.8E-107 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 SUPERFAMILY SSF51182 2 388 2.85E-99 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 Gene3D G3DSA:2.60.120.10 309 388 8.3E-108 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 11 390 8.1E-76 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 ProDom PD049684 ISOMERASE PHOSPHOMANNOSE MANA HI1710 PMI 355 400 1.0E-7 T 14-10-2018 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 Gene3D G3DSA:2.60.120.10 9 284 8.3E-108 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 Pfam PF01238 Phosphomannose isomerase type I 4 364 6.2E-61 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PRINTS PR00714 Phosphomannose isomerase type I signature 7 25 3.8E-48 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 3.8E-48 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PRINTS PR00714 Phosphomannose isomerase type I signature 264 283 3.8E-48 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 3.8E-48 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 3.8E-48 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PRINTS PR00714 Phosphomannose isomerase type I signature 283 302 3.8E-48 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_00935 994e57d2a16a55c3cc21f7afa3f16de4 401 PRINTS PR00714 Phosphomannose isomerase type I signature 245 264 3.8E-48 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 Gene3D G3DSA:3.40.50.300 1 214 2.7E-78 T 14-10-2018 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 SUPERFAMILY SSF52540 1 212 1.09E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04740 5384c70a9158607779daa3fc96b77421 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.1E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.303 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 PRINTS PR00094 Adenylate kinase signature 156 171 4.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 PRINTS PR00094 Adenylate kinase signature 4 17 4.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 PRINTS PR00094 Adenylate kinase signature 81 97 4.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 PRINTS PR00094 Adenylate kinase signature 32 46 4.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 PRINTS PR00094 Adenylate kinase signature 173 187 4.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.8E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DDU33_04740 5384c70a9158607779daa3fc96b77421 214 Pfam PF00406 Adenylate kinase 5 185 2.4E-59 T 14-10-2018 DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 2.6E-9 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 Pfam PF01205 Uncharacterized protein family UPF0029 17 124 2.6E-26 T 14-10-2018 IPR001498 Impact, N-terminal DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 SUPERFAMILY SSF54980 135 199 3.81E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 Gene3D G3DSA:3.30.230.30 1 133 4.2E-49 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 SUPERFAMILY SSF54211 3 131 4.17E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 199 2.4E-75 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 Gene3D G3DSA:3.30.70.240 135 201 4.4E-6 T 14-10-2018 DDU33_02635 19b9c3949352caf013b3ba80ca43d297 201 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.8E-5 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 8.8E-5 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 345 367 8.8E-5 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 360 367 9.1E-8 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 9.1E-8 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.1E-8 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 Pfam PF03486 HI0933-like protein 5 390 2.7E-146 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 SUPERFAMILY SSF51905 1 393 2.81E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 SUPERFAMILY SSF160996 190 336 5.75E-44 T 14-10-2018 DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 Gene3D G3DSA:3.50.50.60 7 386 1.5E-131 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 Gene3D G3DSA:1.10.8.260 260 320 1.5E-131 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 389 4.4E-128 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DDU33_05410 b74adc24ee9c8a19983d4a339fccb606 396 Gene3D G3DSA:2.40.30.10 188 337 1.5E-131 T 14-10-2018 DDU33_10305 4d275cdc526727c2e96784914b545a9d 93 Pfam PF03795 YCII-related domain 1 90 2.2E-27 T 14-10-2018 IPR005545 YCII-related DDU33_10305 4d275cdc526727c2e96784914b545a9d 93 Gene3D G3DSA:3.30.70.1060 1 93 1.9E-35 T 14-10-2018 DDU33_10305 4d275cdc526727c2e96784914b545a9d 93 SUPERFAMILY SSF54909 1 93 7.33E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 Gene3D G3DSA:3.90.640.10 190 265 4.6E-126 T 14-10-2018 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 Gene3D G3DSA:3.30.420.40 158 323 4.6E-126 T 14-10-2018 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 Pfam PF06723 MreB/Mbl protein 11 340 1.6E-143 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 SUPERFAMILY SSF53067 9 152 3.79E-36 T 14-10-2018 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 SUPERFAMILY SSF53067 154 342 4.96E-48 T 14-10-2018 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 341 5.2E-163 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 306 332 2.2E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.2E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.2E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.2E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.2E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DDU33_08885 dd49d295ffa84522592e93ab23c5cedf 350 Gene3D G3DSA:3.30.420.40 14 333 4.6E-126 T 14-10-2018 DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 39 52 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 Gene3D G3DSA:3.40.50.300 3 180 9.7E-55 T 14-10-2018 DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 Gene3D G3DSA:1.10.10.60 260 318 2.9E-26 T 14-10-2018 DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 SMART SM00382 35 174 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 Pfam PF00158 Sigma-54 interaction domain 16 176 7.9E-53 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 SUPERFAMILY SSF52540 15 251 3.34E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 SUPERFAMILY SSF46689 262 317 3.52E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 Gene3D G3DSA:1.10.8.60 181 259 3.4E-19 T 14-10-2018 DDU33_09575 05d41ffadd07602702b31d87d8fd092b 320 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 270 318 7.7E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 Pfam PF07478 D-ala D-ala ligase C-terminus 106 300 2.5E-62 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 301 5.9E-101 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 303 35.577 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 Pfam PF01820 D-ala D-ala ligase N-terminus 7 89 1.3E-18 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 SUPERFAMILY SSF52440 6 99 1.73E-29 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 245 273 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 Gene3D G3DSA:3.40.50.20 1 87 3.7E-30 T 14-10-2018 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 SUPERFAMILY SSF56059 100 299 5.21E-50 T 14-10-2018 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 Gene3D G3DSA:3.30.1490.20 114 181 3.7E-71 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 PIRSF PIRSF039102 45 303 1.2E-83 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 PIRSF PIRSF039102 3 51 2.7E-11 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DDU33_04340 57fd3cbc11b89df1980f2c9ab851b855 303 Gene3D G3DSA:3.30.470.20 88 298 3.7E-71 T 14-10-2018 DDU33_01900 6afa59fdf635b2264907b5c7bdf398a4 154 Gene3D G3DSA:1.10.8.640 18 103 1.6E-33 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DDU33_01900 6afa59fdf635b2264907b5c7bdf398a4 154 Pfam PF03918 Cytochrome C biogenesis protein 8 149 3.5E-50 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 SUPERFAMILY SSF55594 291 377 8.9E-23 T 14-10-2018 IPR035895 HPr-like superfamily DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 6.0E-29 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 Pfam PF00381 PTS HPr component phosphorylation site 292 370 2.4E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 Pfam PF00381 PTS HPr component phosphorylation site 417 499 4.5E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 SUPERFAMILY SSF55594 417 504 6.15E-23 T 14-10-2018 IPR035895 HPr-like superfamily DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 PRINTS PR00107 Phosphocarrier protein signature 299 315 1.3E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 PRINTS PR00107 Phosphocarrier protein signature 455 470 1.3E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 PRINTS PR00107 Phosphocarrier protein signature 470 487 1.3E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 PIRSF PIRSF000690 1 504 3.3E-194 T 14-10-2018 IPR016258 Multiphosphoryl transfer protein FruB DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 Gene3D G3DSA:3.30.1340.10 415 504 1.2E-24 T 14-10-2018 IPR035895 HPr-like superfamily DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 427 434 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 Gene3D G3DSA:3.40.930.10 1 143 4.1E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 Gene3D G3DSA:3.30.1340.10 289 372 7.8E-26 T 14-10-2018 IPR035895 HPr-like superfamily DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 SUPERFAMILY SSF55804 4 141 8.5E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 417 498 1.4E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_06780 2fdcf31a8b0ce5ed6aebe07dd3d6ca72 505 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 291 370 1.5E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 7 239 1.2E-105 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 PIRSF PIRSF000371 3 47 5.7E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 PIRSF PIRSF000371 46 245 2.1E-45 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 Pfam PF04055 Radical SAM superfamily 25 178 1.4E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 Gene3D G3DSA:3.20.20.70 2 246 5.9E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 Pfam PF13353 4Fe-4S single cluster domain 16 130 1.1E-18 T 14-10-2018 DDU33_05780 6a2b806b0c796a3b0307730f33405955 246 SUPERFAMILY SSF102114 23 220 2.75E-23 T 14-10-2018 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 146 4.5E-51 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 SUPERFAMILY SSF54211 261 351 1.39E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 Gene3D G3DSA:3.30.230.40 264 364 1.1E-34 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 Gene3D G3DSA:3.40.50.1000 1 164 6.4E-45 T 14-10-2018 IPR023214 HAD superfamily DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 SUPERFAMILY SSF56784 4 158 1.24E-37 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 SUPERFAMILY SSF54211 176 260 4.68E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 205 346 1.9E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 8.3E-5 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 235 248 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 162 4.0E-80 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 176 364 36.374 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 148 1.9E-24 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 3 364 50.198 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 328 340 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DDU33_00325 9e248d15358dba35a0d00de1e8796ac2 364 Gene3D G3DSA:3.30.230.40 165 263 2.0E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DDU33_07940 b1cc00b8876fcf6d90d51de6ba38e7ab 232 Pfam PF14301 Domain of unknown function (DUF4376) 112 210 3.3E-19 T 14-10-2018 IPR025484 Domain of unknown function DUF4376 DDU33_03625 1af450ab6a19ab8b9f035dd9adf39809 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 91 2.4E-18 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DDU33_03625 1af450ab6a19ab8b9f035dd9adf39809 112 Gene3D G3DSA:1.20.1290.10 2 112 1.3E-27 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DDU33_03625 1af450ab6a19ab8b9f035dd9adf39809 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 25 107 9.3E-20 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DDU33_03625 1af450ab6a19ab8b9f035dd9adf39809 112 SUPERFAMILY SSF69118 7 108 1.31E-26 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DDU33_03070 6855e4ba199c02ebb1ffa314e050dd69 333 PIRSF PIRSF005508 1 333 1.4E-121 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DDU33_03070 6855e4ba199c02ebb1ffa314e050dd69 333 Pfam PF01758 Sodium Bile acid symporter family 47 240 6.8E-45 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DDU33_03070 6855e4ba199c02ebb1ffa314e050dd69 333 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 327 1.7E-125 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DDU33_03070 6855e4ba199c02ebb1ffa314e050dd69 333 Gene3D G3DSA:1.20.1530.20 2 333 2.1E-32 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DDU33_07870 85c61e50e4d3c6a932d1c8bf4b4634d1 150 Pfam PF05926 Phage head completion protein (GPL) 14 150 2.3E-39 T 14-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 DDU33_10135 94b9037f051b2ab53f8f1f72f590ce77 345 Gene3D G3DSA:3.40.50.2000 162 337 8.1E-20 T 14-10-2018 DDU33_10135 94b9037f051b2ab53f8f1f72f590ce77 345 Gene3D G3DSA:3.40.50.2000 1 150 2.1E-29 T 14-10-2018 DDU33_10135 94b9037f051b2ab53f8f1f72f590ce77 345 SUPERFAMILY SSF53756 2 337 3.45E-70 T 14-10-2018 DDU33_10135 94b9037f051b2ab53f8f1f72f590ce77 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 307 2.1E-17 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 SUPERFAMILY SSF54980 292 370 2.77E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 8.7E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Gene3D G3DSA:3.30.70.3380 368 478 1.1E-38 T 14-10-2018 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 0.0 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Gene3D G3DSA:3.30.70.2570 479 553 5.3E-34 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Pfam PF00679 Elongation factor G C-terminus 399 483 4.4E-18 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 SUPERFAMILY SSF52540 2 235 2.35E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 SUPERFAMILY SSF54980 399 493 2.21E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 7.1E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Gene3D G3DSA:3.30.70.870 286 367 5.9E-35 T 14-10-2018 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Gene3D G3DSA:3.40.50.300 1 185 5.5E-73 T 14-10-2018 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.4E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Gene3D G3DSA:2.40.30.10 186 285 1.5E-36 T 14-10-2018 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 309.763 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DDU33_07470 9f969853dcbe48c594f03ed87648a86c 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 175 6.3E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 SUPERFAMILY SSF53223 2 101 9.78E-26 T 14-10-2018 DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 3.4E-90 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 SUPERFAMILY SSF51735 102 264 1.94E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 3.8E-19 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 Gene3D G3DSA:3.40.50.10860 5 253 6.2E-76 T 14-10-2018 DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 28.638 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 Gene3D G3DSA:3.40.50.720 115 236 6.2E-76 T 14-10-2018 DDU33_10810 2b8e5f011d863927dd49c299a53644e7 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 189 5.3E-9 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 Gene3D G3DSA:2.30.130.10 263 363 1.3E-27 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 TIGRFAM TIGR01027 proB: glutamate 5-kinase 3 361 2.8E-145 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 SMART SM00359 273 355 1.2E-16 T 14-10-2018 IPR002478 PUA domain GO:0003723 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 PRINTS PR00474 Glutamate 5-kinase family signature 206 226 1.6E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 PRINTS PR00474 Glutamate 5-kinase family signature 145 172 1.6E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 PRINTS PR00474 Glutamate 5-kinase family signature 73 101 1.6E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 PRINTS PR00474 Glutamate 5-kinase family signature 113 134 1.6E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 PRINTS PR00474 Glutamate 5-kinase family signature 39 53 1.6E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 SUPERFAMILY SSF53633 3 252 9.95E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 Pfam PF00696 Amino acid kinase family 3 232 9.5E-45 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 ProSitePatterns PS00902 Glutamate 5-kinase signature. 204 221 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 Gene3D G3DSA:3.40.1160.10 1 262 1.1E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 Hamap MF_00456 Glutamate 5-kinase [proB]. 3 258 36.245 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 Pfam PF01472 PUA domain 273 345 1.9E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 SUPERFAMILY SSF88697 273 362 1.38E-21 T 14-10-2018 IPR015947 PUA-like superfamily DDU33_09275 4d70e2acb5f9841ed74434f638703630 363 PIRSF PIRSF000729 1 363 6.1E-133 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DDU33_00120 4f908af215eaec99eb46dd04f24d0976 330 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 11 316 4.1E-115 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DDU33_00120 4f908af215eaec99eb46dd04f24d0976 330 SUPERFAMILY SSF52540 45 156 2.52E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00120 4f908af215eaec99eb46dd04f24d0976 330 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 325 39.537 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DDU33_00120 4f908af215eaec99eb46dd04f24d0976 330 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 17 320 4.6E-105 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DDU33_03880 0a3e5e8f0809279a75c8baf8052b1a69 120 SUPERFAMILY SSF47781 44 119 1.07E-26 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_03880 0a3e5e8f0809279a75c8baf8052b1a69 120 Pfam PF12836 Helix-hairpin-helix motif 53 117 5.6E-22 T 14-10-2018 DDU33_03880 0a3e5e8f0809279a75c8baf8052b1a69 120 Gene3D G3DSA:1.10.150.280 42 120 2.4E-20 T 14-10-2018 DDU33_03880 0a3e5e8f0809279a75c8baf8052b1a69 120 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 57 119 1.3E-26 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Gene3D G3DSA:3.20.20.20 340 641 3.2E-130 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Pfam PF02607 B12 binding domain 658 732 3.0E-24 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 SUPERFAMILY SSF51717 355 629 1.44E-86 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Gene3D G3DSA:3.20.20.330 2 339 5.5E-124 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Pfam PF02574 Homocysteine S-methyltransferase 18 323 1.7E-77 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 PIRSF PIRSF000381 2 1201 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 SUPERFAMILY SSF47644 652 737 3.01E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 SMART SM01018 656 739 2.6E-45 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Gene3D G3DSA:1.10.1240.10 649 736 7.5E-40 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 TIGRFAM TIGR02082 metH: methionine synthase 14 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 SUPERFAMILY SSF56507 902 1228 3.66E-110 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Gene3D G3DSA:3.40.50.280 743 894 4.5E-55 T 14-10-2018 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 SUPERFAMILY SSF52242 742 890 2.75E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Gene3D G3DSA:1.10.288.10 939 1099 2.9E-126 T 14-10-2018 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Gene3D G3DSA:3.10.196.10 908 1226 2.9E-126 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 941 1214 3.3E-109 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 SUPERFAMILY SSF82282 8 398 3.53E-115 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Pfam PF02310 B12 binding domain 747 839 1.0E-20 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DDU33_06390 6fde0b9cc6ed53823a78fdbb2dd93ca1 1229 Pfam PF00809 Pterin binding enzyme 359 597 3.8E-57 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_02000 0f947f9255caffde3e23b6f549657097 328 Gene3D G3DSA:1.20.272.10 209 326 4.2E-14 T 14-10-2018 DDU33_02000 0f947f9255caffde3e23b6f549657097 328 SUPERFAMILY SSF52540 3 206 5.32E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02000 0f947f9255caffde3e23b6f549657097 328 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 209 323 1.7E-28 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_02000 0f947f9255caffde3e23b6f549657097 328 Gene3D G3DSA:3.40.50.300 2 166 2.5E-44 T 14-10-2018 DDU33_02000 0f947f9255caffde3e23b6f549657097 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 199 1.4E-57 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_02000 0f947f9255caffde3e23b6f549657097 328 SUPERFAMILY SSF48019 211 324 3.15E-22 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDU33_02000 0f947f9255caffde3e23b6f549657097 328 Pfam PF13177 DNA polymerase III, delta subunit 9 163 6.4E-40 T 14-10-2018 DDU33_00375 901b84aba4e736aa8905b7f45e78caa8 192 Gene3D G3DSA:3.40.50.10490 1 192 1.6E-39 T 14-10-2018 DDU33_00375 901b84aba4e736aa8905b7f45e78caa8 192 SUPERFAMILY SSF53697 1 191 1.92E-34 T 14-10-2018 DDU33_00375 901b84aba4e736aa8905b7f45e78caa8 192 Pfam PF13580 SIS domain 9 144 6.0E-17 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDU33_06880 d12a719444c7698656fa3e7e358abb9e 302 Pfam PF00005 ABC transporter 21 164 1.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_06880 d12a719444c7698656fa3e7e358abb9e 302 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_06880 d12a719444c7698656fa3e7e358abb9e 302 SUPERFAMILY SSF52540 3 236 1.88E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06880 d12a719444c7698656fa3e7e358abb9e 302 SMART SM00382 29 211 3.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_06880 d12a719444c7698656fa3e7e358abb9e 302 Gene3D G3DSA:3.40.50.300 1 247 7.1E-65 T 14-10-2018 DDU33_03135 101bdc5b8069c71851d1b23af2c96acd 101 Pfam PF00403 Heavy-metal-associated domain 38 96 1.1E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDU33_03135 101bdc5b8069c71851d1b23af2c96acd 101 SUPERFAMILY SSF55008 34 100 6.54E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DDU33_03135 101bdc5b8069c71851d1b23af2c96acd 101 Gene3D G3DSA:3.30.70.100 33 101 3.7E-13 T 14-10-2018 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 Pfam PF02911 Formyl transferase, C-terminal domain 206 306 1.6E-26 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 SUPERFAMILY SSF50486 207 311 9.42E-29 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 Gene3D G3DSA:3.10.25.10 209 316 3.6E-32 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 Pfam PF00551 Formyl transferase 6 183 1.3E-53 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 SUPERFAMILY SSF53328 2 206 6.41E-68 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 Gene3D G3DSA:3.40.50.170 1 208 1.8E-84 T 14-10-2018 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 311 9.4E-104 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DDU33_02645 45606ffa4d892e1baf92045282521d75 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 309 37.043 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DDU33_08640 61f8fa5f578540ddf5d80e30ee306cdb 179 Gene3D G3DSA:3.40.50.2020 1 179 6.3E-66 T 14-10-2018 DDU33_08640 61f8fa5f578540ddf5d80e30ee306cdb 179 Pfam PF00156 Phosphoribosyl transferase domain 12 162 2.8E-27 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDU33_08640 61f8fa5f578540ddf5d80e30ee306cdb 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 175 2.7E-71 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 DDU33_08640 61f8fa5f578540ddf5d80e30ee306cdb 179 SUPERFAMILY SSF53271 2 178 3.8E-57 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_10775 21bf1256df47d6032aed60f357bf241b 187 PIRSF PIRSF000232 1 186 1.4E-50 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DDU33_10775 21bf1256df47d6032aed60f357bf241b 187 SUPERFAMILY SSF55469 1 182 4.45E-33 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDU33_10775 21bf1256df47d6032aed60f357bf241b 187 Gene3D G3DSA:3.40.109.10 1 176 7.8E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDU33_10775 21bf1256df47d6032aed60f357bf241b 187 Pfam PF00881 Nitroreductase family 8 162 2.9E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 SUPERFAMILY SSF110324 2 83 4.53E-34 T 14-10-2018 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.5E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.4E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.4E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.4E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 Gene3D G3DSA:2.40.50.100 21 85 8.7E-31 T 14-10-2018 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 6.5E-44 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04270 f5aa446f8a1b8b71ec170290e3116eb6 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.129 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03865 e453cd36945a57d4d3b6209dbe20f9e4 574 SUPERFAMILY SSF56672 84 422 2.3E-49 T 14-10-2018 DDU33_03865 e453cd36945a57d4d3b6209dbe20f9e4 574 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 70 421 2.3E-110 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase DDU33_03865 e453cd36945a57d4d3b6209dbe20f9e4 574 Pfam PF13655 N-terminal domain of reverse transcriptase 25 106 5.1E-33 T 14-10-2018 IPR025960 Reverse transcriptase, N-terminal domain DDU33_03865 e453cd36945a57d4d3b6209dbe20f9e4 574 SMART SM00507 505 559 1.1E-6 T 14-10-2018 IPR003615 HNH nuclease DDU33_03865 e453cd36945a57d4d3b6209dbe20f9e4 574 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 121 340 5.8E-42 T 14-10-2018 IPR000477 Reverse transcriptase domain DDU33_03865 e453cd36945a57d4d3b6209dbe20f9e4 574 Pfam PF08388 Group II intron, maturase-specific domain 357 434 1.6E-22 T 14-10-2018 IPR013597 Group II intron, maturase-specific DDU33_03865 e453cd36945a57d4d3b6209dbe20f9e4 574 Pfam PF01844 HNH endonuclease 518 563 5.4E-6 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DDU33_03395 eb87239a736955ffea4c91060568faee 382 Gene3D G3DSA:3.40.50.450 1 287 1.7E-95 T 14-10-2018 DDU33_03395 eb87239a736955ffea4c91060568faee 382 Gene3D G3DSA:1.10.10.10 312 381 4.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03395 eb87239a736955ffea4c91060568faee 382 Pfam PF02481 DNA recombination-mediator protein A 70 274 2.7E-78 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DDU33_03395 eb87239a736955ffea4c91060568faee 382 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 68 283 1.0E-82 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DDU33_03395 eb87239a736955ffea4c91060568faee 382 SUPERFAMILY SSF102405 78 285 3.11E-43 T 14-10-2018 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 SUPERFAMILY SSF50249 582 662 2.86E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 SUPERFAMILY SSF50249 82 171 2.57E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 Pfam PF00773 RNB domain 189 535 2.1E-89 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 662 2.5E-213 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 Pfam PF08206 Ribonuclease B OB domain 24 71 1.8E-14 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 Gene3D G3DSA:2.40.50.640 82 155 1.4E-24 T 14-10-2018 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 SUPERFAMILY SSF50249 188 574 9.71E-103 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 ProSitePatterns PS01175 Ribonuclease II family signature. 503 527 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 Pfam PF00575 S1 RNA binding domain 582 660 7.6E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 SMART SM00955 189 536 1.2E-114 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 SMART SM00316 578 662 0.0016 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 Gene3D G3DSA:2.40.50.140 577 663 1.1E-28 T 14-10-2018 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 Gene3D G3DSA:2.40.50.140 1 81 5.8E-23 T 14-10-2018 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 662 41.41 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 SUPERFAMILY SSF50249 8 79 7.03E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 661 1.7E-291 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 DDU33_07565 c0a7eb6e19fd460a1c12f9dfae2d1ecd 663 SMART SM00357 23 78 2.3E-6 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DDU33_04195 3141e68624e210b4de43b2892d028190 394 SUPERFAMILY SSF53850 27 392 2.03E-90 T 14-10-2018 DDU33_04195 3141e68624e210b4de43b2892d028190 394 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 DDU33_04195 3141e68624e210b4de43b2892d028190 394 Pfam PF13416 Bacterial extracellular solute-binding protein 47 340 5.0E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 354 373 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 127 146 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 67 85 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 230 249 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 168 187 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 33 51 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 148 167 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 PRINTS PR00181 Maltose binding protein signature 296 317 1.7E-81 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DDU33_04195 3141e68624e210b4de43b2892d028190 394 Gene3D G3DSA:3.40.190.10 135 385 2.2E-134 T 14-10-2018 DDU33_04195 3141e68624e210b4de43b2892d028190 394 Gene3D G3DSA:3.40.190.10 45 354 2.2E-134 T 14-10-2018 DDU33_02345 db04cdba43da3171eff6081d70ab1fb2 363 Gene3D G3DSA:3.60.15.10 3 363 2.8E-104 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_02345 db04cdba43da3171eff6081d70ab1fb2 363 Pfam PF13483 Beta-lactamase superfamily domain 42 290 2.0E-11 T 14-10-2018 DDU33_02345 db04cdba43da3171eff6081d70ab1fb2 363 SUPERFAMILY SSF56281 35 315 8.94E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 57 162 2.5E-6 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 209 4.5E-74 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 SUPERFAMILY SSF55681 2 211 4.31E-69 T 14-10-2018 DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 Gene3D G3DSA:3.30.930.10 3 209 1.9E-60 T 14-10-2018 DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 131 3.0E-24 T 14-10-2018 DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 PIRSF PIRSF016262 1 218 7.1E-59 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDU33_02410 edf8b4e6119642bddf6fb5a1110aee66 218 Hamap MF_00013 Octanoyltransferase [lipB]. 3 211 37.491 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 SMART SM00766 454 579 3.5E-52 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Pfam PF01807 CHC2 zinc finger 6 100 7.7E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Gene3D G3DSA:3.40.1360.10 243 369 7.5E-41 T 14-10-2018 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Hamap MF_00974 DNA primase [dnaG]. 4 580 29.241 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 SUPERFAMILY SSF56731 120 430 1.22E-106 T 14-10-2018 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Pfam PF10410 DnaB-helicase binding domain of primase 372 425 8.9E-12 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Gene3D G3DSA:1.20.50.20 371 429 9.4E-26 T 14-10-2018 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 130 253 3.2E-40 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Pfam PF13155 Toprim-like 264 351 3.6E-14 T 14-10-2018 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 SUPERFAMILY SSF117023 451 580 7.45E-45 T 14-10-2018 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 SMART SM00493 261 332 2.2E-19 T 14-10-2018 IPR006171 TOPRIM domain DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 SUPERFAMILY SSF57783 5 100 3.23E-38 T 14-10-2018 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Pfam PF08278 DNA primase DnaG DnaB-binding 455 577 1.3E-37 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 6.1E-147 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 PIRSF PIRSF002811 2 580 8.0E-138 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Gene3D G3DSA:3.90.580.10 1 102 9.4E-40 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Gene3D G3DSA:3.90.980.10 119 242 1.3E-41 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 SMART SM00400 36 90 2.3E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DDU33_01320 8fbc134a6544ff8e760da12652b3a806 581 Gene3D G3DSA:1.10.860.10 443 581 3.6E-49 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.567 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 Pfam PF01632 Ribosomal protein L35 2 59 1.3E-22 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 SUPERFAMILY SSF143034 2 64 2.35E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 9.0E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 9.0E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.0E-22 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-23 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DDU33_06965 e798522e4169d453c8a367f7b689e3da 65 Gene3D G3DSA:2.40.50.530 1 65 1.1E-19 T 14-10-2018 DDU33_00560 ec82dcb8337487b2897a348802994852 123 Pfam PF01250 Ribosomal protein S6 3 90 7.0E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00560 ec82dcb8337487b2897a348802994852 123 Gene3D G3DSA:3.30.70.60 1 92 4.5E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DDU33_00560 ec82dcb8337487b2897a348802994852 123 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.2E-38 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00560 ec82dcb8337487b2897a348802994852 123 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDU33_00560 ec82dcb8337487b2897a348802994852 123 SUPERFAMILY SSF54995 1 103 2.09E-37 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00560 ec82dcb8337487b2897a348802994852 123 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.03 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DDU33_02900 6e9498bc6bf52641a180e9f5b4240dd6 191 Gene3D G3DSA:3.90.220.20 1 190 6.5E-28 T 14-10-2018 DDU33_02900 6e9498bc6bf52641a180e9f5b4240dd6 191 Pfam PF01420 Type I restriction modification DNA specificity domain 3 171 2.3E-16 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DDU33_02900 6e9498bc6bf52641a180e9f5b4240dd6 191 SUPERFAMILY SSF116734 4 190 9.32E-33 T 14-10-2018 DDU33_08675 31ab8d281942e1822106c15b95e54bbc 108 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDU33_08675 31ab8d281942e1822106c15b95e54bbc 108 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDU33_08675 31ab8d281942e1822106c15b95e54bbc 108 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDU33_08675 31ab8d281942e1822106c15b95e54bbc 108 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDU33_08675 31ab8d281942e1822106c15b95e54bbc 108 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 4.8E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDU33_08675 31ab8d281942e1822106c15b95e54bbc 108 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.8E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DDU33_07755 040f8b9956372230946183bb9080a0e3 336 SUPERFAMILY SSF56349 62 325 1.04E-41 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDU33_07755 040f8b9956372230946183bb9080a0e3 336 Gene3D G3DSA:1.10.443.10 166 336 1.9E-41 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DDU33_07755 040f8b9956372230946183bb9080a0e3 336 Pfam PF00589 Phage integrase family 171 319 5.4E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 Gene3D G3DSA:2.40.50.140 3 80 8.9E-34 T 14-10-2018 DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 SUPERFAMILY SSF57863 87 159 2.88E-6 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 Pfam PF02565 Recombination protein O C terminal 86 228 1.5E-21 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 Hamap MF_00201 DNA repair protein RecO [recO]. 3 233 23.665 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 Gene3D G3DSA:1.20.1440.120 81 239 2.7E-49 T 14-10-2018 DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 Pfam PF11967 Recombination protein O N terminal 1 77 2.2E-25 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 231 1.1E-41 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DDU33_07490 40a5e6774c0cf3b10bbf70cc2a9fac81 241 SUPERFAMILY SSF50249 4 76 1.01E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_02070 134f2f6e9e77d0a8f3ca923e55225601 643 SUPERFAMILY SSF56925 520 642 1.57E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_02070 134f2f6e9e77d0a8f3ca923e55225601 643 Gene3D G3DSA:2.40.160.90 504 643 2.3E-8 T 14-10-2018 DDU33_03090 24ae43d942c1a922303358d0ee90a2cf 204 Pfam PF02527 rRNA small subunit methyltransferase G 20 199 1.3E-61 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDU33_03090 24ae43d942c1a922303358d0ee90a2cf 204 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 200 28.088 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDU33_03090 24ae43d942c1a922303358d0ee90a2cf 204 PIRSF PIRSF003078 1 204 4.0E-64 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDU33_03090 24ae43d942c1a922303358d0ee90a2cf 204 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 203 1.4E-55 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DDU33_03090 24ae43d942c1a922303358d0ee90a2cf 204 Gene3D G3DSA:3.40.50.150 1 204 5.7E-68 T 14-10-2018 DDU33_03090 24ae43d942c1a922303358d0ee90a2cf 204 SUPERFAMILY SSF53335 5 203 8.2E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_00295 52ca96a39a4ae221bc93c84cf3d2b779 249 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 245 34.728 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DDU33_00295 52ca96a39a4ae221bc93c84cf3d2b779 249 Gene3D G3DSA:3.20.20.70 5 249 3.6E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_00295 52ca96a39a4ae221bc93c84cf3d2b779 249 SUPERFAMILY SSF51366 5 247 2.83E-64 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_00295 52ca96a39a4ae221bc93c84cf3d2b779 249 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 241 1.4E-78 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DDU33_00295 52ca96a39a4ae221bc93c84cf3d2b779 249 Pfam PF00977 Histidine biosynthesis protein 6 237 1.9E-75 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.9E-7 T 14-10-2018 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 383 9.9E-7 T 14-10-2018 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 Pfam PF02910 Fumarate reductase flavoprotein C-term 454 580 2.1E-40 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 Gene3D G3DSA:4.10.80.40 542 576 4.0E-16 T 14-10-2018 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 5 581 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 SUPERFAMILY SSF51905 3 431 1.22E-73 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 SUPERFAMILY SSF46977 445 588 1.44E-47 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 Gene3D G3DSA:3.90.700.10 237 364 7.4E-159 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-10 T 14-10-2018 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 383 1.0E-10 T 14-10-2018 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 PIRSF PIRSF000171 1 576 9.9E-46 T 14-10-2018 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 Gene3D G3DSA:3.50.50.60 7 410 7.4E-159 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 SUPERFAMILY SSF56425 227 359 1.94E-39 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 580 3.0E-234 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 Gene3D G3DSA:1.20.58.100 425 541 8.6E-36 T 14-10-2018 DDU33_02595 ef1ffcadedb0f3dfbd5ca0abbee39716 597 Pfam PF00890 FAD binding domain 7 398 6.2E-112 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_09110 2d3ade657dd96a3f019e937f59662294 276 SUPERFAMILY SSF55154 1 203 6.87E-39 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DDU33_09110 2d3ade657dd96a3f019e937f59662294 276 Pfam PF01928 CYTH domain 3 196 1.9E-25 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DDU33_09110 2d3ade657dd96a3f019e937f59662294 276 SMART SM01118 2 202 1.3E-32 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DDU33_09110 2d3ade657dd96a3f019e937f59662294 276 Gene3D G3DSA:2.40.320.10 1 200 1.5E-30 T 14-10-2018 DDU33_10020 3b0b86368d1847725f6739a08e2edf8a 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 3 187 34.633 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 DDU33_10020 3b0b86368d1847725f6739a08e2edf8a 187 SUPERFAMILY SSF143456 2 183 1.44E-57 T 14-10-2018 DDU33_10020 3b0b86368d1847725f6739a08e2edf8a 187 Gene3D G3DSA:3.40.1740.10 6 174 2.2E-57 T 14-10-2018 DDU33_10020 3b0b86368d1847725f6739a08e2edf8a 187 Pfam PF02622 Uncharacterized ACR, COG1678 14 172 9.1E-43 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 Gene3D G3DSA:3.40.50.300 5 244 1.5E-57 T 14-10-2018 DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 Gene3D G3DSA:3.40.50.300 264 510 6.5E-40 T 14-10-2018 DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 SUPERFAMILY SSF52540 273 485 8.71E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 Pfam PF00005 ABC transporter 277 430 4.2E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 SUPERFAMILY SSF52540 9 233 1.02E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 Pfam PF00005 ABC transporter 26 175 2.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 SMART SM00382 35 229 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_03490 183baa4c92648d13e50852b58bd78c76 511 SMART SM00382 284 479 0.27 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_07160 2b6bcf10d929bf4822c537ad9ead4065 350 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 10 342 35.214 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 DDU33_07160 2b6bcf10d929bf4822c537ad9ead4065 350 Pfam PF05128 Domain of unknown function (DUF697) 178 336 8.7E-54 T 14-10-2018 IPR021147 Protein of unknown function DUF697 DDU33_07160 2b6bcf10d929bf4822c537ad9ead4065 350 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 47 336 9.2E-104 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 Pfam PF00186 Dihydrofolate reductase 2 161 2.0E-56 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 14-10-2018 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 PRINTS PR00070 Dihydrofolate reductase signature 94 108 1.1E-14 T 14-10-2018 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 14-10-2018 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 14-10-2018 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 PIRSF PIRSF000194 1 161 5.2E-56 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 SUPERFAMILY SSF53597 1 161 7.85E-53 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DDU33_09270 0ed15f22a0fc0aa5f67c508335ac61f6 161 Gene3D G3DSA:3.40.430.10 1 161 5.2E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.2E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.6E-34 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.6E-34 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.6E-34 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.6E-34 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.6E-34 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.6E-34 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.9E-5 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.9E-5 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 SUPERFAMILY SSF52317 2 192 3.91E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_05590 8af8d8e78856914baef7604057aa6317 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 1.3E-57 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 Gene3D G3DSA:3.40.50.880 1 192 1.4E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.9E-13 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.9E-13 T 14-10-2018 DDU33_05590 8af8d8e78856914baef7604057aa6317 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.9E-13 T 14-10-2018 DDU33_07460 a9079120f4fa650e7cd6a3a30f70dfcf 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 257 36.918 T 14-10-2018 IPR005583 Peroxide stress protein YaaA DDU33_07460 a9079120f4fa650e7cd6a3a30f70dfcf 259 Pfam PF03883 Peroxide stress protein YaaA 1 245 2.7E-89 T 14-10-2018 IPR005583 Peroxide stress protein YaaA DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 Pfam PF07549 SecD/SecF GG Motif 116 139 2.5E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 Pfam PF02355 Protein export membrane protein 435 594 1.5E-17 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 Gene3D G3DSA:3.30.70.3400 221 437 1.1E-49 T 14-10-2018 DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 Gene3D G3DSA:3.30.1360.200 278 431 1.1E-49 T 14-10-2018 DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 Gene3D G3DSA:1.20.1640.10 449 607 5.7E-14 T 14-10-2018 DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 593 1.7E-81 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 46.819 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 600 1.7E-145 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 SUPERFAMILY SSF82866 410 605 1.29E-44 T 14-10-2018 DDU33_06475 1e7c81bf6ac392da828a2e6c85c36fe7 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 5.0E-35 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain DDU33_00040 bd4238770e385582397daba69ea5393c 430 SUPERFAMILY SSF53756 53 421 5.76E-15 T 14-10-2018 DDU33_00040 bd4238770e385582397daba69ea5393c 430 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 1.2E-59 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DDU33_00040 bd4238770e385582397daba69ea5393c 430 Gene3D G3DSA:3.40.50.11720 32 211 3.9E-44 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DDU33_00040 bd4238770e385582397daba69ea5393c 430 Gene3D G3DSA:3.40.50.2000 218 407 3.6E-63 T 14-10-2018 DDU33_00040 bd4238770e385582397daba69ea5393c 430 Pfam PF00534 Glycosyl transferases group 1 249 399 3.6E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DDU33_01625 aa0641cfbd43ba106f8f51f84f85dd0a 428 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 425 49.391 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DDU33_01625 aa0641cfbd43ba106f8f51f84f85dd0a 428 Gene3D G3DSA:3.90.1150.10 12 415 3.6E-164 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_01625 aa0641cfbd43ba106f8f51f84f85dd0a 428 Pfam PF00202 Aminotransferase class-III 25 419 2.8E-128 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_01625 aa0641cfbd43ba106f8f51f84f85dd0a 428 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 422 3.7E-178 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DDU33_01625 aa0641cfbd43ba106f8f51f84f85dd0a 428 SUPERFAMILY SSF53383 6 424 1.73E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_01625 aa0641cfbd43ba106f8f51f84f85dd0a 428 Gene3D G3DSA:3.40.640.10 62 331 3.6E-164 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_01625 aa0641cfbd43ba106f8f51f84f85dd0a 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 195 321 2.6E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 Pfam PF04055 Radical SAM superfamily 29 190 1.5E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 30 41 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 15 338 1.9E-105 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 Pfam PF13353 4Fe-4S single cluster domain 33 134 1.8E-8 T 14-10-2018 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 15 338 37.313 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 SUPERFAMILY SSF102114 15 290 6.41E-69 T 14-10-2018 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 SMART SM00729 24 228 1.1E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DDU33_07980 4e78b78fc2f8c27df024558da1e92405 338 Gene3D G3DSA:3.20.20.70 12 338 6.1E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_08520 2b587204ec27824e2661702da7307b7e 436 SUPERFAMILY SSF53633 3 285 3.35E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_08520 2b587204ec27824e2661702da7307b7e 436 Gene3D G3DSA:3.40.1160.10 5 286 1.6E-80 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_08520 2b587204ec27824e2661702da7307b7e 436 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 435 205.636 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DDU33_08520 2b587204ec27824e2661702da7307b7e 436 Pfam PF00583 Acetyltransferase (GNAT) family 328 396 2.4E-6 T 14-10-2018 IPR000182 GNAT domain DDU33_08520 2b587204ec27824e2661702da7307b7e 436 Pfam PF00696 Amino acid kinase family 23 256 1.4E-20 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DDU33_08520 2b587204ec27824e2661702da7307b7e 436 SUPERFAMILY SSF55729 290 420 2.92E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_08520 2b587204ec27824e2661702da7307b7e 436 Gene3D G3DSA:3.40.630.30 287 435 5.2E-37 T 14-10-2018 DDU33_08520 2b587204ec27824e2661702da7307b7e 436 PIRSF PIRSF000423 1 435 1.8E-192 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DDU33_08520 2b587204ec27824e2661702da7307b7e 436 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 6 435 2.4E-172 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DDU33_10170 937633616119654ac62d38a45f8204b0 442 Gene3D G3DSA:1.25.40.10 228 308 2.3E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10170 937633616119654ac62d38a45f8204b0 442 Gene3D G3DSA:1.25.40.10 309 409 3.5E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10170 937633616119654ac62d38a45f8204b0 442 SUPERFAMILY SSF48452 158 299 3.72E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10170 937633616119654ac62d38a45f8204b0 442 ProDom PD102047 MEMBRANE SUBUNIT OUTER RECEPTOR IMPORT TRANSLOCASE MITOCHONDRIAL TRANSMEMBRANE MITOCHONDRION DIRECT 269 390 2.0E-4 T 14-10-2018 DDU33_10170 937633616119654ac62d38a45f8204b0 442 SUPERFAMILY SSF48452 267 398 4.17E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10170 937633616119654ac62d38a45f8204b0 442 Pfam PF06552 Plant specific mitochondrial import receptor subunit TOM20 269 411 1.9E-10 T 14-10-2018 DDU33_09945 84d98d89e517ea5aaa0e47771fdafe3b 211 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 200 5.0E-48 T 14-10-2018 DDU33_09945 84d98d89e517ea5aaa0e47771fdafe3b 211 SUPERFAMILY SSF101322 1 210 1.57E-71 T 14-10-2018 IPR035932 HflD-like superfamily DDU33_09945 84d98d89e517ea5aaa0e47771fdafe3b 211 Pfam PF04356 Protein of unknown function (DUF489) 7 201 1.4E-69 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD DDU33_09945 84d98d89e517ea5aaa0e47771fdafe3b 211 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 209 33.572 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD DDU33_09945 84d98d89e517ea5aaa0e47771fdafe3b 211 Gene3D G3DSA:1.10.3890.10 1 211 1.7E-68 T 14-10-2018 IPR035932 HflD-like superfamily DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 Pfam PF13437 HlyD family secretion protein 211 309 2.8E-12 T 14-10-2018 DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 Gene3D G3DSA:2.40.30.170 242 288 9.8E-12 T 14-10-2018 DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 Gene3D G3DSA:1.10.287.470 77 112 9.2E-12 T 14-10-2018 DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 Gene3D G3DSA:1.10.287.470 113 176 2.2E-5 T 14-10-2018 DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 Gene3D G3DSA:2.40.50.100 208 241 9.8E-12 T 14-10-2018 DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 Gene3D G3DSA:2.40.50.100 43 76 9.2E-12 T 14-10-2018 DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 SUPERFAMILY SSF111369 168 260 2.62E-9 T 14-10-2018 DDU33_00390 1c26d9e9bef89ec660aefde18cec360d 353 Gene3D G3DSA:1.10.287.470 177 207 9.8E-12 T 14-10-2018 DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 Gene3D G3DSA:1.20.5.480 248 295 1.9E-13 T 14-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 Pfam PF09163 Formate dehydrogenase N, transmembrane 247 289 1.4E-18 T 14-10-2018 IPR015246 Formate dehydrogenase, transmembrane DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 Gene3D G3DSA:3.30.70.20 29 228 1.3E-97 T 14-10-2018 DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 PIRSF PIRSF036298 1 301 2.4E-157 T 14-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 Gene3D G3DSA:3.30.70.20 19 163 1.3E-97 T 14-10-2018 DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 Pfam PF13247 4Fe-4S dicluster domain 93 189 1.3E-25 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 SUPERFAMILY SSF54862 30 280 2.09E-68 T 14-10-2018 DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_09875 058e65e4d1ffec6f1df9e003e61302bd 301 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 9 291 5.0E-154 T 14-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 DDU33_04820 8e549d2976eaa5bdbda7b0029fb24553 291 Gene3D G3DSA:1.25.40.10 198 288 3.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_04820 8e549d2976eaa5bdbda7b0029fb24553 291 SUPERFAMILY SSF48452 212 275 6.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_04820 8e549d2976eaa5bdbda7b0029fb24553 291 Pfam PF13369 Transglutaminase-like superfamily 51 203 3.5E-34 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DDU33_04820 8e549d2976eaa5bdbda7b0029fb24553 291 Pfam PF13371 Tetratricopeptide repeat 210 275 2.5E-21 T 14-10-2018 DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 Pfam PF14743 DNA ligase OB-like domain 203 267 9.8E-26 T 14-10-2018 IPR029319 DNA ligase, OB-like domain DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 Pfam PF01068 ATP dependent DNA ligase domain 37 189 3.7E-13 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 SUPERFAMILY SSF50249 163 266 4.37E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 Gene3D G3DSA:2.40.50.140 193 270 6.3E-8 T 14-10-2018 DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 SUPERFAMILY SSF56091 33 190 2.67E-38 T 14-10-2018 DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 Gene3D G3DSA:3.30.1490.70 29 181 1.6E-41 T 14-10-2018 DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 166 189 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 DDU33_04625 f830366486e5f7998b32399e3fe3f0c7 270 Gene3D G3DSA:3.30.470.30 44 142 1.6E-41 T 14-10-2018 DDU33_02760 08c49f2700d3ae5151bdf0c3e77d3a61 123 Pfam PF03992 Antibiotic biosynthesis monooxygenase 20 95 4.5E-17 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DDU33_02760 08c49f2700d3ae5151bdf0c3e77d3a61 123 Gene3D G3DSA:3.30.70.100 15 122 2.7E-32 T 14-10-2018 DDU33_02760 08c49f2700d3ae5151bdf0c3e77d3a61 123 SUPERFAMILY SSF54909 20 114 6.95E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DDU33_06895 4666ceb7580f8d523b0daef15d7613e7 111 Gene3D G3DSA:1.10.10.370 41 111 3.6E-31 T 14-10-2018 DDU33_06895 4666ceb7580f8d523b0daef15d7613e7 111 PIRSF PIRSF006223 4 111 1.8E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE DDU33_06895 4666ceb7580f8d523b0daef15d7613e7 111 Pfam PF04358 DsrC like protein 6 111 1.3E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE DDU33_06895 4666ceb7580f8d523b0daef15d7613e7 111 Gene3D G3DSA:3.30.1420.10 1 39 1.4E-9 T 14-10-2018 DDU33_06895 4666ceb7580f8d523b0daef15d7613e7 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 2.5E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE DDU33_06895 4666ceb7580f8d523b0daef15d7613e7 111 SUPERFAMILY SSF69721 1 111 3.01E-41 T 14-10-2018 IPR025526 DsrC-like domain superfamily DDU33_08950 c3f7217a6825b4c7ea2c5d15e479dc6c 208 SMART SM01120 32 205 1.2E-78 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DDU33_08950 c3f7217a6825b4c7ea2c5d15e479dc6c 208 Pfam PF02734 DAK2 domain 32 204 2.5E-55 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DDU33_08950 c3f7217a6825b4c7ea2c5d15e479dc6c 208 SUPERFAMILY SSF101473 2 206 3.79E-60 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DDU33_08950 c3f7217a6825b4c7ea2c5d15e479dc6c 208 Gene3D G3DSA:1.25.40.340 1 208 2.0E-69 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DDU33_08950 c3f7217a6825b4c7ea2c5d15e479dc6c 208 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 204 2.2E-77 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 SUPERFAMILY SSF50129 1 96 6.47E-29 T 14-10-2018 IPR011032 GroES-like superfamily DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 SMART SM00883 2 95 1.3E-45 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.245 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 2.7E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 PRINTS PR00297 10kDa chaperonin signature 25 46 9.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 PRINTS PR00297 10kDa chaperonin signature 3 18 9.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 PRINTS PR00297 10kDa chaperonin signature 60 72 9.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 PRINTS PR00297 10kDa chaperonin signature 82 95 9.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DDU33_05360 bb1625aa5e0efd644732f22c908938f0 96 Gene3D G3DSA:2.30.33.40 1 96 1.4E-34 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 9.2E-69 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 ProSitePatterns PS01218 TatC family signature. 154 173 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.002 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 8.4E-80 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 3.3E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 3.3E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 3.3E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDU33_01510 4f3c18bfda9d0447c31a32df904d16bd 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 3.3E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DDU33_05110 04932ab3bfbf0233b1b671affe03f140 386 Pfam PF04055 Radical SAM superfamily 122 290 3.6E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_05110 04932ab3bfbf0233b1b671affe03f140 386 Gene3D G3DSA:1.10.150.530 1 80 3.3E-28 T 14-10-2018 DDU33_05110 04932ab3bfbf0233b1b671affe03f140 386 PIRSF PIRSF006004 13 379 9.5E-148 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DDU33_05110 04932ab3bfbf0233b1b671affe03f140 386 Gene3D G3DSA:3.20.20.70 81 351 3.9E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_05110 04932ab3bfbf0233b1b671affe03f140 386 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 16 371 7.7E-172 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DDU33_05110 04932ab3bfbf0233b1b671affe03f140 386 SUPERFAMILY SSF102114 118 332 9.81E-15 T 14-10-2018 DDU33_05110 04932ab3bfbf0233b1b671affe03f140 386 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 19 366 72.389 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DDU33_01435 49a3566d211be33809a3915511459758 234 SUPERFAMILY SSF56214 26 87 2.46E-10 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DDU33_01435 49a3566d211be33809a3915511459758 234 Gene3D G3DSA:3.90.470.20 25 122 1.1E-14 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DDU33_01435 49a3566d211be33809a3915511459758 234 SUPERFAMILY SSF56214 100 208 5.93E-16 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DDU33_01435 49a3566d211be33809a3915511459758 234 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 101 171 1.3E-9 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DDU33_04805 45590127766568209c281f80b6fdfe47 360 Gene3D G3DSA:1.20.58.410 4 102 9.8E-8 T 14-10-2018 DDU33_04805 45590127766568209c281f80b6fdfe47 360 Pfam PF00472 RF-1 domain 216 321 5.0E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DDU33_04805 45590127766568209c281f80b6fdfe47 360 Gene3D G3DSA:3.30.160.20 210 291 1.9E-97 T 14-10-2018 DDU33_04805 45590127766568209c281f80b6fdfe47 360 Gene3D G3DSA:3.30.70.1660 113 341 1.9E-97 T 14-10-2018 DDU33_04805 45590127766568209c281f80b6fdfe47 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 9.0E-176 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DDU33_04805 45590127766568209c281f80b6fdfe47 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.301 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DDU33_04805 45590127766568209c281f80b6fdfe47 360 SMART SM00937 63 178 7.1E-64 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DDU33_04805 45590127766568209c281f80b6fdfe47 360 Pfam PF03462 PCRF domain 13 203 8.3E-76 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DDU33_04805 45590127766568209c281f80b6fdfe47 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DDU33_04805 45590127766568209c281f80b6fdfe47 360 SUPERFAMILY SSF75620 12 353 3.01E-140 T 14-10-2018 DDU33_03760 d740f1bf93336cb67f02af37df5dc120 356 Pfam PF07690 Major Facilitator Superfamily 12 338 6.7E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_03760 d740f1bf93336cb67f02af37df5dc120 356 SUPERFAMILY SSF103473 12 345 2.62E-30 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_03760 d740f1bf93336cb67f02af37df5dc120 356 Gene3D G3DSA:1.20.1250.20 7 355 1.4E-26 T 14-10-2018 DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 14-10-2018 IPR019844 Cold-shock conserved site DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 Gene3D G3DSA:2.40.50.140 1 69 9.8E-30 T 14-10-2018 DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 SUPERFAMILY SSF50249 3 69 2.4E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 PIRSF PIRSF002599 1 70 1.6E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 Pfam PF00313 'Cold-shock' DNA-binding domain 4 69 3.5E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 PRINTS PR00050 Cold shock protein signature 27 36 5.6E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 PRINTS PR00050 Cold shock protein signature 6 21 5.6E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 PRINTS PR00050 Cold shock protein signature 43 61 5.6E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DDU33_05065 49ae7a2bd424a232863ed3d691fa3610 70 SMART SM00357 5 70 8.2E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DDU33_08840 e9baef4d435afcb19ef2175cd8c2ab1f 335 Gene3D G3DSA:3.20.20.70 1 332 1.4E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_08840 e9baef4d435afcb19ef2175cd8c2ab1f 335 SUPERFAMILY SSF51395 1 333 8.06E-100 T 14-10-2018 DDU33_08840 e9baef4d435afcb19ef2175cd8c2ab1f 335 PIRSF PIRSF000164 14 334 2.3E-90 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DDU33_08840 e9baef4d435afcb19ef2175cd8c2ab1f 335 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 332 48.812 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DDU33_08840 e9baef4d435afcb19ef2175cd8c2ab1f 335 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 333 1.9E-139 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DDU33_08840 e9baef4d435afcb19ef2175cd8c2ab1f 335 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 76 95 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DDU33_08840 e9baef4d435afcb19ef2175cd8c2ab1f 335 Pfam PF01180 Dihydroorotate dehydrogenase 43 333 3.1E-85 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 215 313 3.6E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 SUPERFAMILY SSF55957 425 551 2.49E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 SUPERFAMILY SSF53738 302 439 1.96E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 SUPERFAMILY SSF53738 209 316 3.81E-22 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 50 189 2.4E-37 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 475 536 4.6E-13 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Gene3D G3DSA:3.40.120.10 41 196 4.7E-43 T 14-10-2018 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Gene3D G3DSA:3.30.310.50 446 539 6.5E-9 T 14-10-2018 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 SUPERFAMILY SSF53738 42 218 1.25E-39 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Gene3D G3DSA:3.40.120.10 322 440 2.6E-31 T 14-10-2018 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 145 154 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 437 1.9E-16 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DDU33_02080 914194baf5be1b1f1390ef389ef84c1f 552 Gene3D G3DSA:3.40.120.10 209 321 7.8E-21 T 14-10-2018 DDU33_09175 e416f8d3161814f9a4f9f665928e0514 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 95 6.0E-43 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DDU33_09175 e416f8d3161814f9a4f9f665928e0514 95 Pfam PF01386 Ribosomal L25p family 6 92 8.4E-25 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DDU33_09175 e416f8d3161814f9a4f9f665928e0514 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 27.274 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DDU33_09175 e416f8d3161814f9a4f9f665928e0514 95 Gene3D G3DSA:2.40.240.10 1 95 6.7E-33 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_09175 e416f8d3161814f9a4f9f665928e0514 95 SUPERFAMILY SSF50715 3 95 1.22E-30 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DDU33_02640 87107ec2ace8842a009a5bb11395d9c3 316 SUPERFAMILY SSF53850 22 315 8.22E-84 T 14-10-2018 DDU33_02640 87107ec2ace8842a009a5bb11395d9c3 316 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 314 7.0E-105 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DDU33_02640 87107ec2ace8842a009a5bb11395d9c3 316 Pfam PF16868 NMT1-like family 28 314 2.2E-86 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DDU33_02640 87107ec2ace8842a009a5bb11395d9c3 316 Gene3D G3DSA:3.40.190.10 112 250 2.9E-99 T 14-10-2018 DDU33_02640 87107ec2ace8842a009a5bb11395d9c3 316 Gene3D G3DSA:3.40.190.10 28 314 2.9E-99 T 14-10-2018 DDU33_00520 77b729f5cdda387368419a781546e22e 327 SUPERFAMILY SSF46785 1 113 1.32E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_00520 77b729f5cdda387368419a781546e22e 327 SUPERFAMILY SSF53850 90 305 1.81E-37 T 14-10-2018 DDU33_00520 77b729f5cdda387368419a781546e22e 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_00520 77b729f5cdda387368419a781546e22e 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_00520 77b729f5cdda387368419a781546e22e 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_00520 77b729f5cdda387368419a781546e22e 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 8.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_00520 77b729f5cdda387368419a781546e22e 327 Gene3D G3DSA:3.40.190.10 167 270 1.2E-82 T 14-10-2018 DDU33_00520 77b729f5cdda387368419a781546e22e 327 Gene3D G3DSA:3.40.190.10 93 306 1.2E-82 T 14-10-2018 DDU33_00520 77b729f5cdda387368419a781546e22e 327 Pfam PF03466 LysR substrate binding domain 90 295 8.7E-36 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_00520 77b729f5cdda387368419a781546e22e 327 Gene3D G3DSA:1.10.10.10 1 87 3.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_07675 061674d4f2b169627eded7b80ebfe3ab 92 SUPERFAMILY SSF143011 4 90 9.55E-21 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DDU33_07675 061674d4f2b169627eded7b80ebfe3ab 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 91 1.1E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDU33_07675 061674d4f2b169627eded7b80ebfe3ab 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 7 91 2.4E-12 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDU33_07675 061674d4f2b169627eded7b80ebfe3ab 92 Gene3D G3DSA:3.30.2310.20 3 92 3.9E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DDU33_09570 edeba298ae722506cf2d64ad4424fe8d 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 473 6.3E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DDU33_09570 edeba298ae722506cf2d64ad4424fe8d 560 Gene3D G3DSA:3.90.76.10 49 243 2.5E-111 T 14-10-2018 DDU33_09570 edeba298ae722506cf2d64ad4424fe8d 560 PIRSF PIRSF002741 4 556 8.3E-74 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDU33_09570 edeba298ae722506cf2d64ad4424fe8d 560 Gene3D G3DSA:3.40.190.10 244 543 2.5E-111 T 14-10-2018 DDU33_09570 edeba298ae722506cf2d64ad4424fe8d 560 Gene3D G3DSA:3.10.105.10 320 531 2.5E-111 T 14-10-2018 DDU33_09570 edeba298ae722506cf2d64ad4424fe8d 560 SUPERFAMILY SSF53850 38 553 2.17E-102 T 14-10-2018 DDU33_08170 4e3dd285f7a5ee2d318b873bc96449e4 348 Gene3D G3DSA:3.40.190.10 32 307 6.7E-96 T 14-10-2018 DDU33_08170 4e3dd285f7a5ee2d318b873bc96449e4 348 Pfam PF13343 Bacterial extracellular solute-binding protein 76 320 1.3E-30 T 14-10-2018 DDU33_08170 4e3dd285f7a5ee2d318b873bc96449e4 348 PIRSF PIRSF002825 15 341 4.7E-61 T 14-10-2018 IPR026045 Ferric binding protein DDU33_08170 4e3dd285f7a5ee2d318b873bc96449e4 348 SUPERFAMILY SSF53850 26 325 1.14E-61 T 14-10-2018 DDU33_08170 4e3dd285f7a5ee2d318b873bc96449e4 348 Gene3D G3DSA:3.40.190.10 135 322 6.7E-96 T 14-10-2018 DDU33_00870 8c5d29240783a5db173a13951844f200 511 SMART SM00382 213 393 4.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00870 8c5d29240783a5db173a13951844f200 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 497 8.0E-31 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain DDU33_00870 8c5d29240783a5db173a13951844f200 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 497 4.7E-233 T 14-10-2018 IPR004482 Mg chelatase-related protein DDU33_00870 8c5d29240783a5db173a13951844f200 511 Gene3D G3DSA:3.40.50.300 175 502 4.8E-59 T 14-10-2018 DDU33_00870 8c5d29240783a5db173a13951844f200 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 394 1.9E-92 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain DDU33_00870 8c5d29240783a5db173a13951844f200 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 140 4.1E-43 T 14-10-2018 DDU33_00870 8c5d29240783a5db173a13951844f200 511 SUPERFAMILY SSF52540 191 504 4.83E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00870 8c5d29240783a5db173a13951844f200 511 SUPERFAMILY SSF54211 8 168 5.31E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 SUPERFAMILY SSF52540 337 553 1.31E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 536 3.9E-136 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 Pfam PF00005 ABC transporter 359 505 8.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 Gene3D G3DSA:1.20.1560.10 2 321 3.4E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 SUPERFAMILY SSF90123 7 311 2.49E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 Gene3D G3DSA:3.40.50.300 333 554 5.1E-66 T 14-10-2018 DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 SMART SM00382 368 554 1.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_09950 c8e8926e66ab3f21b70e5e5814e9e04e 554 Pfam PF00664 ABC transporter transmembrane region 59 269 1.6E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 SUPERFAMILY SSF56300 18 321 3.47E-75 T 14-10-2018 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 PRINTS PR01607 Apyrase family signature 205 222 7.6E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 PRINTS PR01607 Apyrase family signature 232 255 7.6E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 PRINTS PR01607 Apyrase family signature 22 40 7.6E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 PRINTS PR01607 Apyrase family signature 259 279 7.6E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 SUPERFAMILY SSF55816 340 552 6.54E-26 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 Pfam PF00149 Calcineurin-like phosphoesterase 25 249 5.0E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 326 492 1.6E-27 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 Gene3D G3DSA:3.60.21.10 16 323 3.4E-77 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_01960 e7123451b90fbc5b31046d05e5a94781 553 Gene3D G3DSA:3.90.780.10 336 547 2.8E-33 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DDU33_08565 7b95d0dd8802d42b7c2148a28577f554 271 Gene3D G3DSA:3.40.50.720 101 270 3.8E-44 T 14-10-2018 DDU33_08565 7b95d0dd8802d42b7c2148a28577f554 271 SUPERFAMILY SSF51735 103 263 1.93E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_08565 7b95d0dd8802d42b7c2148a28577f554 271 Gene3D G3DSA:3.40.50.10860 1 100 2.2E-36 T 14-10-2018 DDU33_08565 7b95d0dd8802d42b7c2148a28577f554 271 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 23 90 4.0E-19 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DDU33_08565 7b95d0dd8802d42b7c2148a28577f554 271 SUPERFAMILY SSF53223 2 102 2.65E-27 T 14-10-2018 DDU33_10140 4ab052d46e865d83b19d305e8893c5d6 274 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 44 55 1.9E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_10140 4ab052d46e865d83b19d305e8893c5d6 274 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 134 1.9E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_10140 4ab052d46e865d83b19d305e8893c5d6 274 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 94 111 1.9E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_10140 4ab052d46e865d83b19d305e8893c5d6 274 Gene3D G3DSA:3.40.710.10 12 272 1.7E-52 T 14-10-2018 DDU33_10140 4ab052d46e865d83b19d305e8893c5d6 274 SUPERFAMILY SSF56601 18 253 3.0E-46 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_10140 4ab052d46e865d83b19d305e8893c5d6 274 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 17 225 1.2E-38 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Gene3D G3DSA:3.30.70.610 357 429 2.2E-13 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Gene3D G3DSA:3.30.70.610 263 336 2.6E-17 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Gene3D G3DSA:3.30.43.10 1 97 5.3E-15 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Gene3D G3DSA:3.30.465.10 100 262 3.6E-73 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 SUPERFAMILY SSF56176 4 266 1.64E-72 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Pfam PF01565 FAD binding domain 41 160 2.0E-8 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 SUPERFAMILY SSF55103 270 562 2.83E-115 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 PIRSF PIRSF000101 1 564 0.0 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Gene3D G3DSA:3.30.1370.20 430 514 4.9E-41 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 563 59.3 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DDU33_08340 2257990fde424f621e0cf02ac4a0ff73 564 Pfam PF09330 D-lactate dehydrogenase, membrane binding 272 562 5.7E-147 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DDU33_03545 c2832f0d66e77df6b6a2eb93b2603f82 101 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.311 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DDU33_03545 c2832f0d66e77df6b6a2eb93b2603f82 101 Gene3D G3DSA:3.30.70.330 1 100 4.3E-39 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DDU33_03545 c2832f0d66e77df6b6a2eb93b2603f82 101 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03545 c2832f0d66e77df6b6a2eb93b2603f82 101 Pfam PF00276 Ribosomal protein L23 9 95 1.2E-33 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DDU33_03545 c2832f0d66e77df6b6a2eb93b2603f82 101 SUPERFAMILY SSF54189 2 92 1.19E-31 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06685 9db3ef4dd7e28c575c907a07d4efab33 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_06685 9db3ef4dd7e28c575c907a07d4efab33 241 Pfam PF00005 ABC transporter 19 166 2.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_06685 9db3ef4dd7e28c575c907a07d4efab33 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.1E-121 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 DDU33_06685 9db3ef4dd7e28c575c907a07d4efab33 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.4E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DDU33_06685 9db3ef4dd7e28c575c907a07d4efab33 241 Gene3D G3DSA:3.40.50.300 2 241 9.6E-72 T 14-10-2018 DDU33_06685 9db3ef4dd7e28c575c907a07d4efab33 241 SUPERFAMILY SSF52540 4 237 3.1E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06685 9db3ef4dd7e28c575c907a07d4efab33 241 SMART SM00382 28 229 2.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 Pfam PF00288 GHMP kinases N terminal domain 89 156 1.7E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 Gene3D G3DSA:3.30.230.10 5 173 2.2E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 SUPERFAMILY SSF55060 178 294 8.63E-32 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 PIRSF PIRSF000676 1 315 2.3E-80 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 Pfam PF08544 GHMP kinases C terminal 234 291 2.0E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 Gene3D G3DSA:3.30.70.890 174 283 2.2E-86 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.634 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 5.0E-113 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 PRINTS PR00958 Homoserine kinase signature 143 156 1.0E-33 T 14-10-2018 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 PRINTS PR00958 Homoserine kinase signature 260 275 1.0E-33 T 14-10-2018 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 PRINTS PR00958 Homoserine kinase signature 181 198 1.0E-33 T 14-10-2018 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 PRINTS PR00958 Homoserine kinase signature 103 118 1.0E-33 T 14-10-2018 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 PRINTS PR00958 Homoserine kinase signature 10 25 1.0E-33 T 14-10-2018 DDU33_10435 d5297580b3a8c8367812879f64a068ab 315 SUPERFAMILY SSF54211 4 191 4.63E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 8 442 1.2E-184 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 SMART SM00729 138 367 1.1E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 444 60.834 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 Gene3D G3DSA:2.40.50.140 382 444 3.3E-21 T 14-10-2018 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 Gene3D G3DSA:3.80.30.20 136 381 5.2E-75 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 142 162 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 Pfam PF00919 Uncharacterized protein family UPF0004 9 92 4.7E-20 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 Pfam PF04055 Radical SAM superfamily 144 325 1.1E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 SUPERFAMILY SSF102114 117 373 3.92E-53 T 14-10-2018 DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 Gene3D G3DSA:3.40.50.12160 7 133 3.6E-28 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DDU33_01925 09dbbac28c710623398e8d0681b7fea3 444 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 442 2.1E-106 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 631 1.1E-228 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 8.6E-84 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 Pfam PF01578 Cytochrome C assembly protein 89 295 7.5E-51 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 TIGRFAM TIGR03145 cyt_nit_nrfE: cytochrome c nitrate reductase biogenesis protein NrfE 1 626 5.9E-294 T 14-10-2018 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 323 626 4.5E-75 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.2E-21 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.2E-21 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.2E-21 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.2E-21 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 315 330 1.2E-21 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.2E-21 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_10715 01e73ccfc1eebe0ca6533ff55298a921 631 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 621 631 1.2E-21 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_00810 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_00810 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 DDU33_02425 d9a9cbf5c4cdb4b9f2ed357f3a515d39 190 Gene3D G3DSA:2.40.40.10 83 177 2.1E-39 T 14-10-2018 IPR036908 RlpA-like domain superfamily DDU33_02425 d9a9cbf5c4cdb4b9f2ed357f3a515d39 190 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 22 176 23.44 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 DDU33_02425 d9a9cbf5c4cdb4b9f2ed357f3a515d39 190 Pfam PF03330 Lytic transglycolase 85 172 2.5E-25 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DDU33_02425 d9a9cbf5c4cdb4b9f2ed357f3a515d39 190 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 183 4.4E-46 T 14-10-2018 IPR012997 Rare lipoprotein A DDU33_02425 d9a9cbf5c4cdb4b9f2ed357f3a515d39 190 SUPERFAMILY SSF50685 81 172 7.67E-14 T 14-10-2018 IPR036908 RlpA-like domain superfamily DDU33_03580 36df466f05c428785694b554d5f76223 84 Pfam PF00366 Ribosomal protein S17 10 76 7.4E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03580 36df466f05c428785694b554d5f76223 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03580 36df466f05c428785694b554d5f76223 84 SUPERFAMILY SSF50249 6 82 1.88E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_03580 36df466f05c428785694b554d5f76223 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.8E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03580 36df466f05c428785694b554d5f76223 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.8E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03580 36df466f05c428785694b554d5f76223 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.8E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03580 36df466f05c428785694b554d5f76223 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.0E-35 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03580 36df466f05c428785694b554d5f76223 84 Gene3D G3DSA:2.40.50.140 1 84 3.8E-36 T 14-10-2018 DDU33_03580 36df466f05c428785694b554d5f76223 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 23.799 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03580 36df466f05c428785694b554d5f76223 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 71 6.0E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08485 937009f8fd9cbd51c89b31614f87ab66 393 Gene3D G3DSA:3.30.420.40 199 367 4.6E-38 T 14-10-2018 DDU33_08485 937009f8fd9cbd51c89b31614f87ab66 393 SUPERFAMILY SSF46785 5 68 6.08E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_08485 937009f8fd9cbd51c89b31614f87ab66 393 Pfam PF00480 ROK family 286 356 9.0E-6 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DDU33_08485 937009f8fd9cbd51c89b31614f87ab66 393 Pfam PF00480 ROK family 80 220 1.4E-6 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DDU33_08485 937009f8fd9cbd51c89b31614f87ab66 393 Gene3D G3DSA:3.30.420.40 82 368 4.6E-38 T 14-10-2018 DDU33_08485 937009f8fd9cbd51c89b31614f87ab66 393 Gene3D G3DSA:1.10.10.10 1 72 7.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_08485 937009f8fd9cbd51c89b31614f87ab66 393 SUPERFAMILY SSF53067 78 364 1.23E-13 T 14-10-2018 DDU33_02300 a7c37882555d8d8b1954a341857ca38b 207 Pfam PF12836 Helix-hairpin-helix motif 144 206 9.4E-22 T 14-10-2018 DDU33_02300 a7c37882555d8d8b1954a341857ca38b 207 SMART SM00278 185 204 120.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_02300 a7c37882555d8d8b1954a341857ca38b 207 SMART SM00278 155 174 0.35 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_02300 a7c37882555d8d8b1954a341857ca38b 207 Gene3D G3DSA:1.10.150.320 129 206 4.9E-21 T 14-10-2018 DDU33_02300 a7c37882555d8d8b1954a341857ca38b 207 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 145 207 1.8E-18 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DDU33_02300 a7c37882555d8d8b1954a341857ca38b 207 SUPERFAMILY SSF47781 129 202 1.05E-24 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_10180 60d8ea7403cb4deeed646e68bc91bf62 552 SMART SM00382 364 550 5.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10180 60d8ea7403cb4deeed646e68bc91bf62 552 Gene3D G3DSA:3.40.50.300 334 551 3.8E-71 T 14-10-2018 DDU33_10180 60d8ea7403cb4deeed646e68bc91bf62 552 SUPERFAMILY SSF52540 338 547 6.61E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10180 60d8ea7403cb4deeed646e68bc91bf62 552 Pfam PF00664 ABC transporter transmembrane region 28 289 1.4E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_10180 60d8ea7403cb4deeed646e68bc91bf62 552 Gene3D G3DSA:1.20.1560.10 8 322 2.8E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_10180 60d8ea7403cb4deeed646e68bc91bf62 552 Pfam PF00005 ABC transporter 355 504 1.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10180 60d8ea7403cb4deeed646e68bc91bf62 552 SUPERFAMILY SSF90123 12 323 3.92E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_02730 861b50edcf1a07f9eb144436ba0bca44 210 Pfam PF13411 MerR HTH family regulatory protein 3 71 4.0E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_02730 861b50edcf1a07f9eb144436ba0bca44 210 SMART SM00422 2 72 0.0011 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_02730 861b50edcf1a07f9eb144436ba0bca44 210 SUPERFAMILY SSF46955 1 85 3.2E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DDU33_02730 861b50edcf1a07f9eb144436ba0bca44 210 Gene3D G3DSA:1.10.1660.10 3 203 3.5E-15 T 14-10-2018 DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 Gene3D G3DSA:3.30.70.260 233 343 3.0E-31 T 14-10-2018 DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 Pfam PF09383 NIL domain 268 339 1.6E-16 T 14-10-2018 IPR018449 NIL domain DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 SUPERFAMILY SSF55021 248 343 4.35E-22 T 14-10-2018 DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 2.1E-185 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 SUPERFAMILY SSF52540 1 240 2.87E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 SMART SM00382 30 217 3.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 SMART SM00930 265 340 6.0E-20 T 14-10-2018 IPR018449 NIL domain DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 Gene3D G3DSA:3.40.50.300 1 232 6.3E-77 T 14-10-2018 DDU33_10280 3cd451143f47b9aeb4a5d29077419b16 344 Pfam PF00005 ABC transporter 21 169 6.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_06820 edd4bb4f544f05234d89e37512568bfa 250 Gene3D G3DSA:3.40.50.10090 32 165 8.6E-55 T 14-10-2018 DDU33_06820 edd4bb4f544f05234d89e37512568bfa 250 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 240 1.5E-31 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06820 edd4bb4f544f05234d89e37512568bfa 250 SUPERFAMILY SSF69618 1 248 6.41E-46 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DDU33_06820 edd4bb4f544f05234d89e37512568bfa 250 Gene3D G3DSA:3.40.50.10090 4 246 8.6E-55 T 14-10-2018 DDU33_02510 8abf061d1a0fe38258d8792d4be7196d 378 Gene3D G3DSA:3.40.50.11820 131 143 6.1E-14 T 14-10-2018 DDU33_02510 8abf061d1a0fe38258d8792d4be7196d 378 Gene3D G3DSA:3.40.50.12580 144 255 6.1E-14 T 14-10-2018 DDU33_02510 8abf061d1a0fe38258d8792d4be7196d 378 SUPERFAMILY SSF53756 84 273 2.09E-13 T 14-10-2018 DDU33_02510 8abf061d1a0fe38258d8792d4be7196d 378 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 130 255 3.0E-9 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 DDU33_00605 f538168ea31c9ca9e15dea09ef151afa 230 Gene3D G3DSA:3.40.50.1860 104 214 1.3E-75 T 14-10-2018 DDU33_00605 f538168ea31c9ca9e15dea09ef151afa 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 219 2.8E-48 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_00605 f538168ea31c9ca9e15dea09ef151afa 230 Gene3D G3DSA:3.40.50.1860 4 222 1.3E-75 T 14-10-2018 DDU33_00605 f538168ea31c9ca9e15dea09ef151afa 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_00605 f538168ea31c9ca9e15dea09ef151afa 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 2.2E-66 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 DDU33_00605 f538168ea31c9ca9e15dea09ef151afa 230 SUPERFAMILY SSF53681 118 228 5.23E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_00605 f538168ea31c9ca9e15dea09ef151afa 230 SUPERFAMILY SSF53681 1 116 4.25E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 SUPERFAMILY SSF51395 9 319 3.66E-68 T 14-10-2018 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 8 322 4.7E-166 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 90 108 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 Gene3D G3DSA:3.20.20.70 6 246 1.5E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 323 50.91 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 PIRSF PIRSF006621 1 324 1.0E-68 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 Gene3D G3DSA:1.20.120.1460 250 324 1.9E-22 T 14-10-2018 DDU33_04865 858f23026ff7e6ba16b78ad276f6f775 324 Pfam PF01207 Dihydrouridine synthase (Dus) 12 316 9.7E-91 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SUPERFAMILY SSF46955 403 475 2.38E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Pfam PF01588 Putative tRNA binding domain 45 145 9.6E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SUPERFAMILY SSF54991 696 794 6.8E-32 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Gene3D G3DSA:3.30.56.10 401 475 2.7E-27 T 14-10-2018 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SUPERFAMILY SSF50249 35 197 9.43E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Gene3D G3DSA:2.40.50.140 39 154 8.5E-74 T 14-10-2018 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SUPERFAMILY SSF56037 196 396 8.63E-77 T 14-10-2018 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SMART SM00874 403 471 1.0E-30 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Gene3D G3DSA:3.30.930.10 490 692 8.7E-56 T 14-10-2018 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SMART SM00873 212 385 4.2E-97 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.1E-19 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Pfam PF03483 B3/4 domain 212 385 1.7E-71 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 6.5E-278 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.8E-30 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Gene3D G3DSA:3.50.40.10 197 395 1.4E-81 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SMART SM00896 701 794 1.2E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Gene3D G3DSA:3.30.56.10 7 179 8.5E-74 T 14-10-2018 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.981 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 SUPERFAMILY SSF55681 467 689 1.14E-49 T 14-10-2018 DDU33_08550 72132b16ba83c7c78874e275792cc287 795 Gene3D G3DSA:3.30.70.380 702 795 3.6E-31 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DDU33_08555 e3c5d16f054a5c5eb4b92fe96eb01ceb 328 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 22 88 4.3E-25 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DDU33_08555 e3c5d16f054a5c5eb4b92fe96eb01ceb 328 Pfam PF01409 tRNA synthetases class II core domain (F) 93 327 4.0E-103 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DDU33_08555 e3c5d16f054a5c5eb4b92fe96eb01ceb 328 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 327 47.733 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DDU33_08555 e3c5d16f054a5c5eb4b92fe96eb01ceb 328 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 328 9.1E-115 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DDU33_08555 e3c5d16f054a5c5eb4b92fe96eb01ceb 328 SUPERFAMILY SSF46589 21 100 2.56E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DDU33_08555 e3c5d16f054a5c5eb4b92fe96eb01ceb 328 Gene3D G3DSA:3.30.930.10 8 328 9.3E-120 T 14-10-2018 DDU33_08555 e3c5d16f054a5c5eb4b92fe96eb01ceb 328 SUPERFAMILY SSF55681 93 328 1.19E-80 T 14-10-2018 DDU33_08650 6514de6b90ea5aee5c07ed456e00e136 61 Gene3D G3DSA:3.30.160.160 1 47 1.6E-24 T 14-10-2018 DDU33_08650 6514de6b90ea5aee5c07ed456e00e136 61 Pfam PF07411 Domain of unknown function (DUF1508) 8 56 2.3E-21 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 DDU33_08650 6514de6b90ea5aee5c07ed456e00e136 61 SUPERFAMILY SSF160113 1 58 1.23E-19 T 14-10-2018 IPR036913 YegP-like superfamily DDU33_07115 3be15bbfa182d13068aac4c24be2da95 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 5.5E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DDU33_07115 3be15bbfa182d13068aac4c24be2da95 561 Pfam PF00501 AMP-binding enzyme 29 461 4.0E-108 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DDU33_07115 3be15bbfa182d13068aac4c24be2da95 561 Gene3D G3DSA:3.40.50.12780 12 457 5.7E-113 T 14-10-2018 DDU33_07115 3be15bbfa182d13068aac4c24be2da95 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site DDU33_07115 3be15bbfa182d13068aac4c24be2da95 561 Gene3D G3DSA:3.30.300.310 458 558 4.5E-32 T 14-10-2018 DDU33_07115 3be15bbfa182d13068aac4c24be2da95 561 SUPERFAMILY SSF56801 22 554 1.31E-146 T 14-10-2018 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.422 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 Gene3D G3DSA:3.30.70.3280 390 529 3.6E-53 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 9.2E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.2E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.2E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 9.2E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 3.5E-47 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 SUPERFAMILY SSF54980 393 468 1.98E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.7E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 9.2E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 164 3.5E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 Gene3D G3DSA:3.40.50.300 110 275 5.1E-116 T 14-10-2018 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 SUPERFAMILY SSF50447 262 393 1.72E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 SUPERFAMILY SSF52540 10 277 2.82E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 529 0.0 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DDU33_01520 977b94dcb13564b2494733d7b98d7b36 529 Gene3D G3DSA:3.40.50.300 72 379 5.1E-116 T 14-10-2018 DDU33_01105 9e7289aa0d4e009ad499d6889249eda0 743 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 727 1.0E-225 T 14-10-2018 IPR010019 Integral membrane protein, YccS DDU33_01105 9e7289aa0d4e009ad499d6889249eda0 743 Pfam PF13515 Fusaric acid resistance protein-like 411 537 6.2E-22 T 14-10-2018 DDU33_01105 9e7289aa0d4e009ad499d6889249eda0 743 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 727 7.7E-205 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK DDU33_01105 9e7289aa0d4e009ad499d6889249eda0 743 Pfam PF12805 FUSC-like inner membrane protein yccS 68 344 7.9E-100 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal DDU33_06585 fb2499e8cd5136d6d75a54ae047606df 389 Gene3D G3DSA:3.20.20.70 3 377 5.1E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_06585 fb2499e8cd5136d6d75a54ae047606df 389 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 344 1.2E-58 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDU33_06585 fb2499e8cd5136d6d75a54ae047606df 389 SUPERFAMILY SSF51395 4 351 2.11E-82 T 14-10-2018 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 Gene3D G3DSA:3.30.300.130 108 196 6.4E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 126 188 2.0E-26 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 SUPERFAMILY SSF89360 8 104 4.32E-23 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 Pfam PF01106 NifU-like domain 120 181 1.2E-18 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 106 1.8E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 9 199 4.1E-97 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 Gene3D G3DSA:2.60.300.12 7 105 3.6E-14 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 8 199 45.417 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 DDU33_05515 587565ad1a94efaec3da849405ecb59f 199 SUPERFAMILY SSF117916 102 193 2.4E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DDU33_09865 27151aac5b050732bee83120806144ca 195 SUPERFAMILY SSF53706 35 193 5.37E-51 T 14-10-2018 DDU33_09865 27151aac5b050732bee83120806144ca 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 104 3.5E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_09865 27151aac5b050732bee83120806144ca 195 Gene3D G3DSA:2.20.25.90 38 108 8.1E-17 T 14-10-2018 DDU33_09865 27151aac5b050732bee83120806144ca 195 Gene3D G3DSA:3.40.50.740 109 195 1.3E-30 T 14-10-2018 DDU33_09865 27151aac5b050732bee83120806144ca 195 SMART SM00926 43 104 1.3E-21 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0071 T 14-10-2018 DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 Pfam PF00106 short chain dehydrogenase 7 199 8.0E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 Gene3D G3DSA:3.40.50.720 1 243 1.1E-60 T 14-10-2018 DDU33_02755 31a7a41fa4b09c9b409d552b44ebbaf0 249 SUPERFAMILY SSF51735 1 233 1.95E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_05060 21b476d4c1b418b435e105e696c86cc1 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 4.7E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_05060 21b476d4c1b418b435e105e696c86cc1 224 SUPERFAMILY SSF161098 7 201 6.67E-31 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_05060 21b476d4c1b418b435e105e696c86cc1 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 3.4E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DDU33_05060 21b476d4c1b418b435e105e696c86cc1 224 Gene3D G3DSA:1.10.3720.10 1 216 3.8E-41 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_08890 6254f2a2949ebee567ffcbb6e92138f7 209 Pfam PF01810 LysE type translocator 14 199 1.1E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDU33_04240 c791f33087c25c4b43cf935561ab3011 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 4.0E-15 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04240 c791f33087c25c4b43cf935561ab3011 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.245 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04240 c791f33087c25c4b43cf935561ab3011 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_04240 c791f33087c25c4b43cf935561ab3011 44 Pfam PF00468 Ribosomal protein L34 1 44 2.7E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04240 c791f33087c25c4b43cf935561ab3011 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 6.8E-27 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_10145 d265c7e907df4529bbefd5d133b04907 253 Gene3D G3DSA:3.90.550.10 1 161 2.3E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_10145 d265c7e907df4529bbefd5d133b04907 253 SUPERFAMILY SSF53448 1 146 2.91E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_10145 d265c7e907df4529bbefd5d133b04907 253 Pfam PF00535 Glycosyl transferase family 2 5 125 1.1E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_05440 12600cf4676dc728fb8856d6be351646 424 Pfam PF03129 Anticodon binding domain 329 421 1.6E-12 T 14-10-2018 IPR004154 Anticodon-binding DDU33_05440 12600cf4676dc728fb8856d6be351646 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 32.981 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DDU33_05440 12600cf4676dc728fb8856d6be351646 424 Pfam PF13393 Histidyl-tRNA synthetase 10 311 7.6E-47 T 14-10-2018 DDU33_05440 12600cf4676dc728fb8856d6be351646 424 SUPERFAMILY SSF52954 328 422 7.2E-24 T 14-10-2018 DDU33_05440 12600cf4676dc728fb8856d6be351646 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 407 1.9E-153 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DDU33_05440 12600cf4676dc728fb8856d6be351646 424 PIRSF PIRSF001549 2 423 2.3E-122 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DDU33_05440 12600cf4676dc728fb8856d6be351646 424 Gene3D G3DSA:3.40.50.800 325 422 2.3E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DDU33_05440 12600cf4676dc728fb8856d6be351646 424 Gene3D G3DSA:3.30.930.10 2 321 5.0E-115 T 14-10-2018 DDU33_05440 12600cf4676dc728fb8856d6be351646 424 SUPERFAMILY SSF55681 5 319 1.88E-99 T 14-10-2018 DDU33_06565 1dcd5f75a823c8c67dcc80a1acf1b1f2 351 Gene3D G3DSA:3.40.50.1820 27 350 1.5E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_06565 1dcd5f75a823c8c67dcc80a1acf1b1f2 351 Pfam PF07859 alpha/beta hydrolase fold 115 325 6.8E-53 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DDU33_06565 1dcd5f75a823c8c67dcc80a1acf1b1f2 351 SUPERFAMILY SSF53474 95 340 5.91E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.168 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 6.6E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 3.4E-28 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 1.5E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Pfam PF08264 Anticodon-binding domain of tRNA 701 821 4.6E-17 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 SUPERFAMILY SSF52374 4 668 1.39E-146 T 14-10-2018 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Gene3D G3DSA:3.10.330.110 567 628 0.0 T 14-10-2018 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 SUPERFAMILY SSF50677 226 415 7.53E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.0E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.0E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.0E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.0E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.0E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.0E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.0E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 14-10-2018 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 SUPERFAMILY SSF47323 662 860 4.86E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.1E-78 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 Gene3D G3DSA:3.10.20.590 798 861 1.0E-21 T 14-10-2018 DDU33_09665 4d3c43df07eef92ea9c62a1762f38d02 862 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 860 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 SUPERFAMILY SSF53681 5 106 1.08E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 Gene3D G3DSA:3.40.50.1860 8 243 1.3E-86 T 14-10-2018 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 Hamap MF_00258 Glutamate racemase [murI]. 3 255 33.26 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 Gene3D G3DSA:3.40.50.1860 95 207 1.3E-86 T 14-10-2018 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 245 4.4E-73 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 214 1.6E-27 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_01985 0d6aae64ed7185e07bf043131451277c 264 SUPERFAMILY SSF53681 108 261 1.96E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DDU33_03460 8ae15e5626d140f02eea395d3b7c1b4a 219 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 9 208 2.1E-82 T 14-10-2018 IPR008517 Protein of unknown function DUF799 DDU33_03460 8ae15e5626d140f02eea395d3b7c1b4a 219 Gene3D G3DSA:3.40.50.10610 24 188 1.1E-61 T 14-10-2018 DDU33_02380 4dedb60fb1a67b903997895921a76445 135 Gene3D G3DSA:1.10.260.40 1 90 6.8E-16 T 14-10-2018 DDU33_02380 4dedb60fb1a67b903997895921a76445 135 SUPERFAMILY SSF47413 1 65 2.82E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_02380 4dedb60fb1a67b903997895921a76445 135 ProDom PD740661 HI1458 EAG0009 57 135 0.008 T 14-10-2018 DDU33_02380 4dedb60fb1a67b903997895921a76445 135 Pfam PF01381 Helix-turn-helix 7 61 1.5E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_02380 4dedb60fb1a67b903997895921a76445 135 SMART SM00530 6 61 2.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_03000 988223cd5f9a20728fe20610e5e026f7 296 SUPERFAMILY SSF90123 20 293 2.35E-15 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_03000 988223cd5f9a20728fe20610e5e026f7 296 Gene3D G3DSA:1.20.1560.10 18 295 9.2E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_03000 988223cd5f9a20728fe20610e5e026f7 296 Pfam PF13748 ABC transporter transmembrane region 22 258 4.5E-89 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 SUPERFAMILY SSF52540 346 517 3.22E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 29 850 17.495 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 SUPERFAMILY SSF52156 629 759 1.44E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 SUPERFAMILY SSF50447 754 850 1.36E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Pfam PF11987 Translation-initiation factor 2 637 742 1.5E-36 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 354 510 2.1E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Gene3D G3DSA:2.40.30.10 524 642 2.2E-40 T 14-10-2018 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Gene3D G3DSA:2.40.30.10 754 851 3.1E-34 T 14-10-2018 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Gene3D G3DSA:3.40.50.300 348 523 8.3E-72 T 14-10-2018 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 276 326 1.5E-16 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Gene3D G3DSA:3.40.50.10050 646 753 4.1E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 ProSitePatterns PS01176 Initiation factor 2 signature. 803 825 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 268 852 5.7E-294 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 Pfam PF00009 Elongation factor Tu GTP binding domain 355 512 6.2E-36 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_08280 c73c0e7cd80aa90e1b8aa2281ebd99c9 852 SUPERFAMILY SSF50447 526 607 5.2E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 Pfam PF02065 Melibiase 255 592 1.0E-118 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 Gene3D G3DSA:3.20.20.70 274 589 9.5E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 21 233 4.4E-40 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 337 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PIRSF PIRSF005536 1 711 1.1E-231 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 Gene3D G3DSA:2.70.98.60 2 273 9.8E-50 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 SUPERFAMILY SSF51445 289 620 1.76E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_10085 64fbc19c29ceaee4932a525c4607ab29 711 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 2.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 729 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 Gene3D G3DSA:1.10.486.10 385 541 5.6E-133 T 14-10-2018 DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 Pfam PF13361 UvrD-like helicase C-terminal domain 280 618 7.5E-84 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 SUPERFAMILY SSF52540 7 643 1.81E-179 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 Gene3D G3DSA:1.10.10.160 117 190 9.9E-100 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 Gene3D G3DSA:3.40.50.300 10 276 9.9E-100 T 14-10-2018 DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 275 2.0E-81 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DDU33_00680 011f05070044d7cb9304b10b7df2a2bd 731 Gene3D G3DSA:3.40.50.300 284 638 5.6E-133 T 14-10-2018 DDU33_08830 5fd067493ea560efd57511491af0628d 885 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 297 1.3E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_08830 5fd067493ea560efd57511491af0628d 885 Gene3D G3DSA:3.40.50.970 470 703 4.9E-104 T 14-10-2018 DDU33_08830 5fd067493ea560efd57511491af0628d 885 SUPERFAMILY SSF52922 699 884 8.9E-60 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DDU33_08830 5fd067493ea560efd57511491af0628d 885 SUPERFAMILY SSF52518 57 465 4.24E-131 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_08830 5fd067493ea560efd57511491af0628d 885 Gene3D G3DSA:3.40.50.920 704 885 1.7E-69 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DDU33_08830 5fd067493ea560efd57511491af0628d 885 Gene3D G3DSA:3.40.50.970 56 468 7.1E-127 T 14-10-2018 DDU33_08830 5fd067493ea560efd57511491af0628d 885 SUPERFAMILY SSF52518 471 697 3.53E-94 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_08830 5fd067493ea560efd57511491af0628d 885 PIRSF PIRSF000156 1 885 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DDU33_08830 5fd067493ea560efd57511491af0628d 885 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 6 884 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DDU33_09415 37113374a732f37f53bd336fe2a6219d 107 Gene3D G3DSA:2.60.300.12 2 107 3.2E-38 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DDU33_09415 37113374a732f37f53bd336fe2a6219d 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DDU33_09415 37113374a732f37f53bd336fe2a6219d 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.8E-38 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DDU33_09415 37113374a732f37f53bd336fe2a6219d 107 SUPERFAMILY SSF89360 1 96 4.32E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DDU33_09415 37113374a732f37f53bd336fe2a6219d 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.5E-25 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DDU33_09415 37113374a732f37f53bd336fe2a6219d 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.4E-58 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 DDU33_08900 2df65513b8a4df4c41637efe36976e3c 194 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.1E-65 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DDU33_08900 2df65513b8a4df4c41637efe36976e3c 194 Gene3D G3DSA:2.70.40.10 1 194 5.9E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily DDU33_08900 2df65513b8a4df4c41637efe36976e3c 194 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 4 138 2.1E-7 T 14-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 DDU33_08900 2df65513b8a4df4c41637efe36976e3c 194 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 32.987 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DDU33_08900 2df65513b8a4df4c41637efe36976e3c 194 SUPERFAMILY SSF51283 1 193 1.22E-55 T 14-10-2018 IPR036157 dUTPase-like superfamily DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 SUPERFAMILY SSF56349 110 293 5.3E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 Gene3D G3DSA:1.10.150.130 5 100 2.6E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 Gene3D G3DSA:1.10.443.10 113 289 1.1E-58 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 Pfam PF00589 Phage integrase family 114 281 6.5E-52 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 297 2.6E-110 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 295 57.745 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 SUPERFAMILY SSF47823 8 100 6.08E-11 T 14-10-2018 DDU33_01595 d05c6980b91b2f55c2ae881308907e89 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 90 2.8E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 SUPERFAMILY SSF51197 1 101 2.2E-38 T 14-10-2018 DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 SUPERFAMILY SSF53335 66 276 2.9E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 Pfam PF09313 Domain of unknown function (DUF1971) 8 88 3.3E-32 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 PIRSF PIRSF005215 1 290 5.4E-147 T 14-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 Gene3D G3DSA:2.60.120.10 1 106 1.1E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 Pfam PF03848 Tellurite resistance protein TehB 90 285 6.1E-99 T 14-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 Gene3D G3DSA:3.40.50.150 107 289 3.4E-41 T 14-10-2018 DDU33_04930 3758a0fecc45ada671fa37cc34ef5288 290 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 47 288 1.0E-112 T 14-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 DDU33_08440 5c42ef62888a970e9db545c788e9baae 332 Gene3D G3DSA:3.30.540.10 7 322 2.3E-122 T 14-10-2018 DDU33_08440 5c42ef62888a970e9db545c788e9baae 332 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 327 2.1E-154 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DDU33_08440 5c42ef62888a970e9db545c788e9baae 332 PIRSF PIRSF004532 1 332 3.2E-129 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DDU33_08440 5c42ef62888a970e9db545c788e9baae 332 SUPERFAMILY SSF56655 2 326 3.66E-106 T 14-10-2018 DDU33_08440 5c42ef62888a970e9db545c788e9baae 332 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 324 5.7E-127 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DDU33_08440 5c42ef62888a970e9db545c788e9baae 332 Gene3D G3DSA:3.40.190.90 112 279 2.3E-122 T 14-10-2018 DDU33_09790 919e09e112f79b28903fe2cca36cd764 466 Gene3D G3DSA:1.25.40.10 55 189 1.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_09790 919e09e112f79b28903fe2cca36cd764 466 SUPERFAMILY SSF48452 62 154 1.47E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_09790 919e09e112f79b28903fe2cca36cd764 466 Pfam PF04575 Protein of unknown function (DUF560) 178 466 2.8E-94 T 14-10-2018 IPR007655 Protein of unknown function DUF560 DDU33_07195 c90c033c37c4c52f4367677a33e26191 385 SUPERFAMILY SSF102114 6 384 6.15E-104 T 14-10-2018 DDU33_07195 c90c033c37c4c52f4367677a33e26191 385 Pfam PF06969 HemN C-terminal domain 312 372 8.9E-11 T 14-10-2018 IPR010723 HemN, C-terminal DDU33_07195 c90c033c37c4c52f4367677a33e26191 385 Pfam PF04055 Radical SAM superfamily 12 181 5.9E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_07195 c90c033c37c4c52f4367677a33e26191 385 SMART SM00729 7 231 2.8E-48 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DDU33_07195 c90c033c37c4c52f4367677a33e26191 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 8 376 1.2E-150 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 DDU33_07195 c90c033c37c4c52f4367677a33e26191 385 Gene3D G3DSA:3.80.30.20 2 305 2.7E-93 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DDU33_06445 c629137b5f4cceac75b99713233f157d 256 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 7 181 1.0E-42 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 DDU33_09860 33ba91a3d05cb4e0604f65f1c2031bd0 271 Gene3D G3DSA:3.40.140.10 123 270 8.1E-43 T 14-10-2018 DDU33_09860 33ba91a3d05cb4e0604f65f1c2031bd0 271 Gene3D G3DSA:3.10.20.10 31 116 8.4E-11 T 14-10-2018 DDU33_09860 33ba91a3d05cb4e0604f65f1c2031bd0 271 PIRSF PIRSF015626 1 270 6.1E-76 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDU33_09860 33ba91a3d05cb4e0604f65f1c2031bd0 271 SUPERFAMILY SSF53927 23 267 1.29E-69 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDU33_09860 33ba91a3d05cb4e0604f65f1c2031bd0 271 Pfam PF02634 FdhD/NarQ family 30 267 5.3E-69 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDU33_09860 33ba91a3d05cb4e0604f65f1c2031bd0 271 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 268 31.916 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDU33_09860 33ba91a3d05cb4e0604f65f1c2031bd0 271 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 25 268 1.6E-74 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DDU33_02350 38368047f846eb682474730e3fa9880f 594 PIRSF PIRSF037343 1 592 1.1E-290 T 14-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted DDU33_02350 38368047f846eb682474730e3fa9880f 594 Gene3D G3DSA:3.40.50.2300 499 589 1.0E-18 T 14-10-2018 DDU33_02350 38368047f846eb682474730e3fa9880f 594 SUPERFAMILY SSF52794 499 590 3.4E-15 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DDU33_02350 38368047f846eb682474730e3fa9880f 594 Pfam PF03611 PTS system sugar-specific permease component 14 415 3.3E-123 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DDU33_02350 38368047f846eb682474730e3fa9880f 594 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 500 565 9.1E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDU33_03875 883379a3e0a1cc199290709a1c91f030 296 Pfam PF02666 Phosphatidylserine decarboxylase 73 293 1.3E-58 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DDU33_03875 883379a3e0a1cc199290709a1c91f030 296 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 20 296 46.641 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DDU33_03875 883379a3e0a1cc199290709a1c91f030 296 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 60 294 2.0E-83 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 Pfam PF01235 Sodium:alanine symporter family 63 459 5.2E-153 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 PRINTS PR00175 Sodium/alanine symporter signature 356 378 9.1E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 PRINTS PR00175 Sodium/alanine symporter signature 188 206 9.1E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 PRINTS PR00175 Sodium/alanine symporter signature 97 119 9.1E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 PRINTS PR00175 Sodium/alanine symporter signature 416 436 9.1E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 PRINTS PR00175 Sodium/alanine symporter signature 216 235 9.1E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 PRINTS PR00175 Sodium/alanine symporter signature 311 329 9.1E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 97 112 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_08815 da2b8290e611073b1843a0bfe4018805 481 TIGRFAM TIGR00835 agcS: amino acid carrier protein 24 447 6.8E-162 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DDU33_07550 910f654c1228ba351b90e93ed1899495 405 Pfam PF04143 Sulphur transport 6 162 6.5E-27 T 14-10-2018 IPR007272 Sulphur transport domain DDU33_07550 910f654c1228ba351b90e93ed1899495 405 Pfam PF04143 Sulphur transport 238 389 1.3E-21 T 14-10-2018 IPR007272 Sulphur transport domain DDU33_06060 8beeb44f6fa27441197b4c5f67b8f71b 460 Gene3D G3DSA:3.30.1150.10 379 451 1.3E-15 T 14-10-2018 DDU33_06060 8beeb44f6fa27441197b4c5f67b8f71b 460 TIGRFAM TIGR02794 tolA_full: protein TolA 10 271 1.1E-28 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 DDU33_06060 8beeb44f6fa27441197b4c5f67b8f71b 460 TIGRFAM TIGR02794 tolA_full: protein TolA 232 455 6.9E-45 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 DDU33_06060 8beeb44f6fa27441197b4c5f67b8f71b 460 Pfam PF06519 TolA C-terminal 374 455 4.6E-20 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 DDU33_06060 8beeb44f6fa27441197b4c5f67b8f71b 460 SUPERFAMILY SSF74653 373 458 3.4E-17 T 14-10-2018 DDU33_05570 f567fc0e0cfc316e365f0e9fc33413df 173 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 10 172 9.3E-67 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria DDU33_05570 f567fc0e0cfc316e365f0e9fc33413df 173 Pfam PF03350 Uncharacterized protein family, UPF0114 16 132 1.8E-38 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 DDU33_05570 f567fc0e0cfc316e365f0e9fc33413df 173 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 173 83.514 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 TIGRFAM TIGR02510 NrdE-prime: ribonucleoside-diphosphate reductase, alpha chain 5 554 5.1E-258 T 14-10-2018 IPR013350 Ribonucleotide reductase alpha chain DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 Gene3D G3DSA:3.20.70.20 207 542 2.3E-92 T 14-10-2018 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 Gene3D G3DSA:3.20.70.20 17 206 1.9E-37 T 14-10-2018 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 210 376 1.0E-26 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 84 207 2.1E-22 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 381 532 3.5E-35 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 157 176 1.6E-13 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 324 346 1.6E-13 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 385 412 1.6E-13 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDU33_04875 0fe524f497bfc48b45663403b0cbf4f7 554 SUPERFAMILY SSF51998 82 535 1.65E-111 T 14-10-2018 DDU33_06705 c26ae8467f32d43467446737fd82423e 274 Gene3D G3DSA:3.10.310.50 29 174 1.4E-49 T 14-10-2018 DDU33_06705 c26ae8467f32d43467446737fd82423e 274 Pfam PF04536 TPM domain 40 165 1.9E-38 T 14-10-2018 IPR007621 TPM domain DDU33_10670 fbcb164dedb3090635d8ada65ebe191f 300 SUPERFAMILY SSF103481 51 146 1.44E-10 T 14-10-2018 DDU33_10670 fbcb164dedb3090635d8ada65ebe191f 300 Pfam PF00892 EamA-like transporter family 158 295 6.2E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_10670 fbcb164dedb3090635d8ada65ebe191f 300 Pfam PF00892 EamA-like transporter family 9 143 2.2E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_10670 fbcb164dedb3090635d8ada65ebe191f 300 SUPERFAMILY SSF103481 214 297 1.83E-13 T 14-10-2018 DDU33_08975 e83ab27ec4edb51eea5c0675861c86e1 313 PIRSF PIRSF026649 5 310 2.0E-87 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDU33_08975 e83ab27ec4edb51eea5c0675861c86e1 313 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 312 1.6E-133 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DDU33_08975 e83ab27ec4edb51eea5c0675861c86e1 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 302 1.9E-100 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DDU33_08975 e83ab27ec4edb51eea5c0675861c86e1 313 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 312 47.664 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DDU33_04905 2b0c2c4c20200f917814304918e36480 501 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 47 483 7.8E-254 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DDU33_04905 2b0c2c4c20200f917814304918e36480 501 SUPERFAMILY SSF48695 47 479 5.06E-158 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DDU33_04905 2b0c2c4c20200f917814304918e36480 501 Pfam PF02335 Cytochrome c552 52 480 7.7E-181 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DDU33_04905 2b0c2c4c20200f917814304918e36480 501 Gene3D G3DSA:1.20.140.10 319 461 9.6E-183 T 14-10-2018 DDU33_04905 2b0c2c4c20200f917814304918e36480 501 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 485 59.392 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DDU33_04905 2b0c2c4c20200f917814304918e36480 501 Gene3D G3DSA:1.10.1130.10 51 480 9.6E-183 T 14-10-2018 DDU33_04905 2b0c2c4c20200f917814304918e36480 501 PIRSF PIRSF000243 2 488 6.9E-131 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 SUPERFAMILY SSF81799 115 216 5.89E-34 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 SUPERFAMILY SSF53335 8 312 2.21E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 Pfam PF01795 MraW methylase family 7 313 3.8E-122 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 Gene3D G3DSA:3.40.50.150 11 312 2.3E-108 T 14-10-2018 DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 PIRSF PIRSF004486 2 314 2.6E-105 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 Gene3D G3DSA:1.10.150.170 113 217 2.3E-108 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 313 39.173 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DDU33_01310 49ffa498229940cead43ab6b83a2ad27 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 312 6.8E-133 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DDU33_10285 79bba5b8be63a24adb05b375907e6099 225 Gene3D G3DSA:1.10.3720.10 10 224 2.7E-47 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_10285 79bba5b8be63a24adb05b375907e6099 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 222 8.8E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_10285 79bba5b8be63a24adb05b375907e6099 225 SUPERFAMILY SSF161098 15 210 8.76E-46 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_08610 b67e2b6ebebab48f38d4b77f03364081 252 SMART SM00382 26 213 9.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08610 b67e2b6ebebab48f38d4b77f03364081 252 SUPERFAMILY SSF52540 1 227 6.44E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08610 b67e2b6ebebab48f38d4b77f03364081 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_08610 b67e2b6ebebab48f38d4b77f03364081 252 Pfam PF00005 ABC transporter 17 164 4.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_08610 b67e2b6ebebab48f38d4b77f03364081 252 Gene3D G3DSA:3.40.50.300 1 249 1.6E-66 T 14-10-2018 DDU33_01370 d332424f91706d5e6fd580cb2b128b55 261 Pfam PF01061 ABC-2 type transporter 16 221 8.0E-29 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DDU33_01370 d332424f91706d5e6fd580cb2b128b55 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 9.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_01370 d332424f91706d5e6fd580cb2b128b55 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 36 57 9.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_01370 d332424f91706d5e6fd580cb2b128b55 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 9.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_06135 46d8d4b6f8e17b31a412103ba94aa250 421 Pfam PF00464 Serine hydroxymethyltransferase 8 386 6.6E-183 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DDU33_06135 46d8d4b6f8e17b31a412103ba94aa250 421 SUPERFAMILY SSF53383 4 419 7.48E-175 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_06135 46d8d4b6f8e17b31a412103ba94aa250 421 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 420 50.853 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DDU33_06135 46d8d4b6f8e17b31a412103ba94aa250 421 Gene3D G3DSA:3.90.1150.10 10 397 1.1E-180 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_06135 46d8d4b6f8e17b31a412103ba94aa250 421 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DDU33_06135 46d8d4b6f8e17b31a412103ba94aa250 421 Gene3D G3DSA:3.40.640.10 37 289 1.1E-180 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_06135 46d8d4b6f8e17b31a412103ba94aa250 421 PIRSF PIRSF000412 1 420 8.4E-163 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DDU33_04175 a727002e550144f974fd4442bd52001b 273 Pfam PF00535 Glycosyl transferase family 2 12 152 2.8E-12 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_04175 a727002e550144f974fd4442bd52001b 273 SUPERFAMILY SSF53448 3 223 4.69E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_04175 a727002e550144f974fd4442bd52001b 273 Gene3D G3DSA:3.90.550.10 2 206 6.4E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_09365 3e063151507de2706366d48a214d173e 200 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 75 198 1.9E-10 T 14-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain DDU33_09365 3e063151507de2706366d48a214d173e 200 SUPERFAMILY SSF56925 59 199 1.73E-21 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_09365 3e063151507de2706366d48a214d173e 200 Gene3D G3DSA:2.40.160.90 80 200 8.0E-22 T 14-10-2018 DDU33_06470 15f9cbbfa707ee6fcdce03b8253ea2c7 101 PRINTS PR01853 Bacterial YajC preprotein translocase signature 45 63 6.6E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC DDU33_06470 15f9cbbfa707ee6fcdce03b8253ea2c7 101 PRINTS PR01853 Bacterial YajC preprotein translocase signature 7 27 6.6E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC DDU33_06470 15f9cbbfa707ee6fcdce03b8253ea2c7 101 Pfam PF02699 Preprotein translocase subunit 9 86 3.1E-25 T 14-10-2018 IPR003849 Preprotein translocase YajC DDU33_06470 15f9cbbfa707ee6fcdce03b8253ea2c7 101 SMART SM01323 5 89 5.9E-36 T 14-10-2018 IPR003849 Preprotein translocase YajC DDU33_06470 15f9cbbfa707ee6fcdce03b8253ea2c7 101 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 6 89 2.1E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 Gene3D G3DSA:3.30.1140.32 108 208 2.4E-46 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.4E-101 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 Gene3D G3DSA:3.30.300.20 17 107 1.9E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.6E-42 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 SUPERFAMILY SSF54814 2 106 1.75E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 Pfam PF07650 KH domain 38 111 1.2E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 SUPERFAMILY SSF54821 107 206 1.57E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 SMART SM00322 60 125 2.1E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.65 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DDU33_03565 c7800e6e20dcba39db859178eba03dd0 235 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02200 1ef1421fbc171f4bc641cf927a1c911e 420 Pfam PF02447 GntP family permease 11 414 1.2E-23 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DDU33_01065 0141ce5eda65aa1d081982470dcf9c73 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DDU33_01065 0141ce5eda65aa1d081982470dcf9c73 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 190 1.8E-54 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDU33_01065 0141ce5eda65aa1d081982470dcf9c73 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DDU33_01065 0141ce5eda65aa1d081982470dcf9c73 194 SUPERFAMILY SSF53178 4 193 1.83E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DDU33_01065 0141ce5eda65aa1d081982470dcf9c73 194 Gene3D G3DSA:3.40.50.1470 1 194 3.7E-72 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DDU33_01065 0141ce5eda65aa1d081982470dcf9c73 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 4.6E-69 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDU33_01065 0141ce5eda65aa1d081982470dcf9c73 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 36.374 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DDU33_10025 50078e15ea7f159b0f0ccfd3d6a33701 222 SUPERFAMILY SSF55120 12 219 2.4E-60 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_10025 50078e15ea7f159b0f0ccfd3d6a33701 222 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_10025 50078e15ea7f159b0f0ccfd3d6a33701 222 Pfam PF00849 RNA pseudouridylate synthase 22 171 4.3E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_10025 50078e15ea7f159b0f0ccfd3d6a33701 222 Gene3D G3DSA:3.30.2350.10 5 222 1.4E-66 T 14-10-2018 DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.3E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 Gene3D G3DSA:1.10.40.30 383 446 5.4E-159 T 14-10-2018 DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 2.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 2.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 Gene3D G3DSA:1.10.275.10 1 117 3.6E-52 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 Pfam PF00206 Lyase 14 313 2.8E-73 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 SUPERFAMILY SSF48557 10 455 2.83E-107 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 2.4E-152 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_09925 180ace3e8dea5a8cb8b9edaddb8d8095 456 Gene3D G3DSA:1.20.200.10 118 447 5.4E-159 T 14-10-2018 DDU33_06510 cecc45af14dbc223221d7235819a0c00 397 SUPERFAMILY SSF53383 25 394 6.4E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_06510 cecc45af14dbc223221d7235819a0c00 397 Gene3D G3DSA:3.40.640.10 4 260 4.1E-72 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_06510 cecc45af14dbc223221d7235819a0c00 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 393 3.9E-119 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDU33_06510 cecc45af14dbc223221d7235819a0c00 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDU33_06510 cecc45af14dbc223221d7235819a0c00 397 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 10 396 2.0E-180 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DDU33_06510 cecc45af14dbc223221d7235819a0c00 397 PIRSF PIRSF001434 1 397 1.3E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDU33_06510 cecc45af14dbc223221d7235819a0c00 397 Gene3D G3DSA:3.90.1150.10 261 397 1.3E-43 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_08935 a1db4900750835ceb92f0f5e2aff177a 158 SUPERFAMILY SSF69765 1 157 7.06E-67 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDU33_08935 a1db4900750835ceb92f0f5e2aff177a 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 6.8E-70 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDU33_08935 a1db4900750835ceb92f0f5e2aff177a 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.197 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDU33_08935 a1db4900750835ceb92f0f5e2aff177a 158 Pfam PF02542 YgbB family 2 155 1.8E-66 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDU33_08935 a1db4900750835ceb92f0f5e2aff177a 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDU33_08935 a1db4900750835ceb92f0f5e2aff177a 158 Gene3D G3DSA:3.30.1330.50 1 158 4.8E-73 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 360 4.4E-111 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 260 275 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 73 94 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 424 447 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 508 531 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 162 182 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 471 493 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR00701 60kDa inner membrane protein signature 333 353 1.7E-89 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 Pfam PF02096 60Kd inner membrane protein 363 542 2.5E-65 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 25.677 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 362 542 1.0E-74 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 Pfam PF14849 YidC periplasmic domain 67 352 4.8E-86 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 Gene3D G3DSA:2.70.98.90 63 342 1.1E-89 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 3.8E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR01900 YidC translocation/secretion protein signature 477 492 3.8E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_04060 cabb2071b5260ed5046ffe3dfd69eb8c 554 PRINTS PR01900 YidC translocation/secretion protein signature 348 364 3.8E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DDU33_00925 928ebfbe2f9bfda277b350f0881c033f 501 Pfam PF07730 Histidine kinase 301 365 2.3E-10 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DDU33_00925 928ebfbe2f9bfda277b350f0881c033f 501 Pfam PF05231 MASE1 13 264 7.6E-10 T 14-10-2018 IPR007895 MASE1 DDU33_00925 928ebfbe2f9bfda277b350f0881c033f 501 Gene3D G3DSA:3.30.565.10 368 500 9.0E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_00925 928ebfbe2f9bfda277b350f0881c033f 501 SUPERFAMILY SSF55874 369 499 5.89E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_06610 4b2ff649b1b37b8e0eeba477a6019021 149 SUPERFAMILY SSF46785 5 143 1.14E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_06610 4b2ff649b1b37b8e0eeba477a6019021 149 Gene3D G3DSA:1.10.10.10 2 149 7.0E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06610 4b2ff649b1b37b8e0eeba477a6019021 149 Pfam PF01638 HxlR-like helix-turn-helix 19 104 4.0E-22 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DDU33_01200 cd7b76f07a42544a29eb0f0e57e636c0 263 SUPERFAMILY SSF51351 3 258 6.54E-87 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_01200 cd7b76f07a42544a29eb0f0e57e636c0 263 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 248 1.1E-82 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_01200 cd7b76f07a42544a29eb0f0e57e636c0 263 Pfam PF00121 Triosephosphate isomerase 6 255 3.8E-89 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_01200 cd7b76f07a42544a29eb0f0e57e636c0 263 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 257 60.545 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_01200 cd7b76f07a42544a29eb0f0e57e636c0 263 ProSitePatterns PS00171 Triosephosphate isomerase active site. 174 184 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_01200 cd7b76f07a42544a29eb0f0e57e636c0 263 Gene3D G3DSA:3.20.20.70 2 263 2.0E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_03920 1863192b9c65c3f8305d5f62a51026ff 270 Gene3D G3DSA:1.10.3720.10 11 267 6.1E-63 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_03920 1863192b9c65c3f8305d5f62a51026ff 270 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 4 261 1.7E-87 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DDU33_03920 1863192b9c65c3f8305d5f62a51026ff 270 SUPERFAMILY SSF161098 12 260 7.29E-55 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_03920 1863192b9c65c3f8305d5f62a51026ff 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 269 5.4E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_03920 1863192b9c65c3f8305d5f62a51026ff 270 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 265 4.2E-109 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 DDU33_02165 93405f44c6e7e1f905093bcc9e58ae3f 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 6.1E-60 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DDU33_02165 93405f44c6e7e1f905093bcc9e58ae3f 123 SMART SM01374 1 123 2.5E-86 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDU33_02165 93405f44c6e7e1f905093bcc9e58ae3f 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02165 93405f44c6e7e1f905093bcc9e58ae3f 123 Gene3D G3DSA:2.40.150.20 1 123 5.3E-57 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_02165 93405f44c6e7e1f905093bcc9e58ae3f 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 4.0E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDU33_02165 93405f44c6e7e1f905093bcc9e58ae3f 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.503 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DDU33_02165 93405f44c6e7e1f905093bcc9e58ae3f 123 SUPERFAMILY SSF50193 2 122 2.62E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_10460 721d4a0022a1c9525ce8fac28ddb138a 410 Pfam PF00860 Permease family 10 377 1.8E-96 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DDU33_10460 721d4a0022a1c9525ce8fac28ddb138a 410 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 8 400 9.2E-121 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DDU33_09295 922b3bcf90bd259bfbb81391e9949b50 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 85 2.3E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDU33_09295 922b3bcf90bd259bfbb81391e9949b50 95 SUPERFAMILY SSF143011 1 84 3.79E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DDU33_09295 922b3bcf90bd259bfbb81391e9949b50 95 Gene3D G3DSA:3.30.2310.20 1 95 1.5E-26 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DDU33_04080 411d435028802ba6bdc89297f55ca340 370 PRINTS PR01021 OMPA domain signature 283 298 5.9E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 PRINTS PR01021 OMPA domain signature 298 314 5.9E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 PRINTS PR01021 OMPA domain signature 251 273 5.9E-18 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 Gene3D G3DSA:2.40.160.20 20 227 9.8E-49 T 14-10-2018 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 PRINTS PR01022 Outer membrane protein A signature 239 254 1.1E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 PRINTS PR01022 Outer membrane protein A signature 307 326 1.1E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 PRINTS PR01022 Outer membrane protein A signature 123 139 1.1E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 PRINTS PR01022 Outer membrane protein A signature 341 354 1.1E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 SUPERFAMILY SSF103088 238 362 3.01E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_04080 411d435028802ba6bdc89297f55ca340 370 Pfam PF01389 OmpA-like transmembrane domain 21 229 1.1E-62 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 DDU33_04080 411d435028802ba6bdc89297f55ca340 370 Gene3D G3DSA:3.30.1330.60 228 370 9.1E-47 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_04080 411d435028802ba6bdc89297f55ca340 370 SUPERFAMILY SSF56925 20 231 9.68E-35 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_04080 411d435028802ba6bdc89297f55ca340 370 Pfam PF00691 OmpA family 250 343 7.6E-21 T 14-10-2018 IPR006665 OmpA-like domain DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 SUPERFAMILY SSF54719 95 204 2.36E-46 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.5E-29 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 1.5E-40 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 SUPERFAMILY SSF46609 1 90 8.77E-34 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 PIRSF PIRSF000349 1 209 8.0E-80 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 Gene3D G3DSA:1.10.287.990 20 90 5.1E-29 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 Gene3D G3DSA:2.40.500.20 94 212 3.0E-51 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_10400 39d3e2ec4c650920bf9fd4fcaaa6487c 213 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DDU33_02820 22a5c27e81a6bb0e83d07bfba7726234 277 SMART SM00849 27 213 1.1E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_02820 22a5c27e81a6bb0e83d07bfba7726234 277 Gene3D G3DSA:3.60.15.10 13 245 2.2E-24 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_02820 22a5c27e81a6bb0e83d07bfba7726234 277 Pfam PF00753 Metallo-beta-lactamase superfamily 24 213 7.4E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_02820 22a5c27e81a6bb0e83d07bfba7726234 277 SUPERFAMILY SSF56281 18 230 4.34E-31 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_03765 27d22249b5be7144f463711a33a351dd 154 Pfam PF14534 Domain of unknown function (DUF4440) 42 106 3.3E-6 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 DDU33_03765 27d22249b5be7144f463711a33a351dd 154 SUPERFAMILY SSF54427 40 98 3.01E-7 T 14-10-2018 IPR032710 NTF2-like domain superfamily DDU33_03765 27d22249b5be7144f463711a33a351dd 154 Gene3D G3DSA:3.10.450.50 29 148 1.0E-10 T 14-10-2018 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 SMART SM00729 88 297 1.6E-18 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 Hamap MF_00206 Lipoyl synthase [lipA]. 1 325 152.619 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 77 2.1E-6 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 Pfam PF04055 Radical SAM superfamily 94 255 1.4E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 Gene3D G3DSA:3.20.20.70 86 294 3.7E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 SUPERFAMILY SSF102114 57 322 1.31E-69 T 14-10-2018 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 TIGRFAM TIGR00510 lipA: lipoyl synthase 26 324 2.1E-152 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDU33_02405 0f40b1b09a312d5548c93463acf305bf 325 PIRSF PIRSF005963 3 325 8.8E-133 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DDU33_06800 f290afaae949a91391bf78c2cbd5881b 240 Gene3D G3DSA:1.20.144.10 1 239 3.6E-50 T 14-10-2018 DDU33_06800 f290afaae949a91391bf78c2cbd5881b 240 SMART SM00014 77 223 2.1E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDU33_06800 f290afaae949a91391bf78c2cbd5881b 240 Pfam PF01569 PAP2 superfamily 81 225 6.7E-26 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DDU33_06800 f290afaae949a91391bf78c2cbd5881b 240 SUPERFAMILY SSF48317 8 227 1.07E-26 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DDU33_05005 bdaf14663aa2e563e5038fb14af96458 217 Pfam PF10144 Bacterial virulence factor haemolysin 4 155 1.4E-55 T 14-10-2018 IPR019305 Uncharacterised protein family Smp DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 Gene3D G3DSA:3.40.50.2030 234 379 1.1E-64 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 Gene3D G3DSA:1.20.1270.20 149 232 3.1E-24 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 1.2E-156 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 550 19.854 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 PIRSF PIRSF000076 1 551 4.6E-226 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 SUPERFAMILY SSF56821 1 545 5.1E-186 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 2.8E-221 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 Gene3D G3DSA:1.20.1270.20 1 138 1.4E-33 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_03980 e0bff0fe3e127dbe0c57e72bfb92aa9f 551 Gene3D G3DSA:3.40.50.2030 380 549 3.4E-55 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 1.0E-270 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 Gene3D G3DSA:3.30.930.10 119 579 1.7E-196 T 14-10-2018 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 Gene3D G3DSA:3.30.1360.30 272 421 1.7E-196 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 559 1.3E-105 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 SUPERFAMILY SSF55681 109 584 2.99E-106 T 14-10-2018 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 Pfam PF02938 GAD domain 308 407 1.1E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 SUPERFAMILY SSF55261 289 420 1.8E-46 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 32.942 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 SUPERFAMILY SSF50249 2 106 1.16E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 Gene3D G3DSA:2.40.50.140 1 107 4.1E-33 T 14-10-2018 DDU33_05700 e6a2d2ef3a029e2a39d6ff2983da389f 588 Pfam PF01336 OB-fold nucleic acid binding domain 19 100 9.4E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Gene3D G3DSA:3.90.1440.10 229 368 1.7E-172 T 14-10-2018 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Gene3D G3DSA:3.40.50.300 22 415 1.7E-172 T 14-10-2018 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 SUPERFAMILY SSF81767 227 368 2.75E-40 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 SUPERFAMILY SSF52540 5 415 6.89E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Pfam PF07516 SecA Wing and Scaffold domain 618 829 3.2E-65 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Pfam PF01043 SecA preprotein cross-linking domain 233 358 2.7E-35 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Pfam PF07517 SecA DEAD-like domain 7 402 2.6E-130 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 SMART SM00958 228 358 1.2E-76 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 SUPERFAMILY SSF52540 417 617 4.87E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Gene3D G3DSA:1.10.3060.10 621 833 6.3E-76 T 14-10-2018 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 SUPERFAMILY SSF81886 620 887 1.44E-81 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Pfam PF02810 SEC-C motif 879 896 1.8E-10 T 14-10-2018 IPR004027 SEC-C motif DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 SMART SM00957 6 402 1.7E-299 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 PRINTS PR00906 SecA protein signature 170 190 4.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 PRINTS PR00906 SecA protein signature 339 361 4.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 PRINTS PR00906 SecA protein signature 63 87 4.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 PRINTS PR00906 SecA protein signature 101 115 4.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 PRINTS PR00906 SecA protein signature 413 426 4.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 PRINTS PR00906 SecA protein signature 117 127 4.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 PRINTS PR00906 SecA protein signature 376 393 4.1E-73 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Gene3D G3DSA:3.40.50.300 417 620 8.2E-83 T 14-10-2018 DDU33_10745 1f2604599cc50aea664fb0444b4b9fff 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.423 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DDU33_01640 e6d6a84454e523e20e854dec1f0f284e 88 PIRSF PIRSF037291 1 87 6.1E-37 T 14-10-2018 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related DDU33_01640 e6d6a84454e523e20e854dec1f0f284e 88 Gene3D G3DSA:3.40.30.10 2 87 1.4E-6 T 14-10-2018 DDU33_01640 e6d6a84454e523e20e854dec1f0f284e 88 SUPERFAMILY SSF52833 3 76 1.77E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_00510 bc0cd0ff0234bbc4e66dc51f2e1cacf5 196 Gene3D G3DSA:3.30.420.10 1 196 1.6E-76 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_00510 bc0cd0ff0234bbc4e66dc51f2e1cacf5 196 Pfam PF01351 Ribonuclease HII 13 189 1.3E-41 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain DDU33_00510 bc0cd0ff0234bbc4e66dc51f2e1cacf5 196 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.137 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 DDU33_00510 bc0cd0ff0234bbc4e66dc51f2e1cacf5 196 SUPERFAMILY SSF53098 4 194 1.82E-69 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 Gene3D G3DSA:1.10.10.10 1 55 1.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 SUPERFAMILY SSF100950 72 230 3.24E-23 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 SMART SM00420 6 58 8.4E-19 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 Pfam PF00455 DeoR C terminal sensor domain 73 227 2.2E-34 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.1E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.1E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 SMART SM01134 71 229 3.1E-35 T 14-10-2018 DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 SUPERFAMILY SSF46785 4 63 3.48E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDU33_02340 dafaf426e0a80f2284d0246f2981fb6b 248 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.5E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_02690 b6926132e9f4204c2d0959fb732eb3b9 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 6.2E-52 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02690 b6926132e9f4204c2d0959fb732eb3b9 101 Gene3D G3DSA:2.10.150.10 1 101 6.0E-48 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02690 b6926132e9f4204c2d0959fb732eb3b9 101 Pfam PF00699 Urease beta subunit 3 99 4.0E-44 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02690 b6926132e9f4204c2d0959fb732eb3b9 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.366 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02690 b6926132e9f4204c2d0959fb732eb3b9 101 SUPERFAMILY SSF51278 1 101 3.01E-47 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Gene3D G3DSA:1.10.287.1150 85 169 2.1E-20 T 14-10-2018 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 SUPERFAMILY SSF52518 123 540 1.05E-85 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Gene3D G3DSA:3.40.50.12470 560 805 3.7E-173 T 14-10-2018 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Pfam PF02779 Transketolase, pyrimidine binding domain 595 790 3.9E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 15 52 7.5E-16 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 794 935 4.8E-55 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 17 934 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Gene3D G3DSA:3.40.50.11610 726 932 3.7E-173 T 14-10-2018 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Gene3D G3DSA:3.40.50.970 170 535 3.0E-147 T 14-10-2018 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 SUPERFAMILY SSF52518 579 796 5.0E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 PIRSF PIRSF000157 1 937 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 Pfam PF00676 Dehydrogenase E1 component 223 519 1.8E-55 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DDU33_07275 03d1e0fce17f3faa8c418129cbc56948 937 SMART SM00861 596 789 9.5E-61 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDU33_08535 980bb7bab4bfae28035fbb70d6bfd169 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 9.8E-70 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DDU33_08535 980bb7bab4bfae28035fbb70d6bfd169 149 Pfam PF03477 ATP cone domain 50 133 4.5E-14 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DDU33_08535 980bb7bab4bfae28035fbb70d6bfd169 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 82.275 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DDU33_00985 aee76cf19e75679f9091b6dd57f79399 309 Pfam PF00924 Mechanosensitive ion channel 89 286 3.8E-54 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DDU33_00985 aee76cf19e75679f9091b6dd57f79399 309 SUPERFAMILY SSF82861 45 130 8.24E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DDU33_00985 aee76cf19e75679f9091b6dd57f79399 309 Gene3D G3DSA:2.30.30.60 147 196 9.5E-19 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DDU33_00985 aee76cf19e75679f9091b6dd57f79399 309 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 161 195 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DDU33_00985 aee76cf19e75679f9091b6dd57f79399 309 SUPERFAMILY SSF82689 199 297 8.24E-30 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DDU33_00985 aee76cf19e75679f9091b6dd57f79399 309 SUPERFAMILY SSF50182 132 197 1.86E-17 T 14-10-2018 IPR010920 LSM domain superfamily DDU33_00985 aee76cf19e75679f9091b6dd57f79399 309 Gene3D G3DSA:3.30.70.100 197 291 9.7E-24 T 14-10-2018 DDU33_03890 4dc94703d5e506f38885f32f40ab81a2 149 PIRSF PIRSF007352 10 148 8.3E-27 T 14-10-2018 IPR012097 Opacity-associated protein B DDU33_03890 4dc94703d5e506f38885f32f40ab81a2 149 Gene3D G3DSA:2.40.128.200 60 149 1.3E-7 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DDU33_03890 4dc94703d5e506f38885f32f40ab81a2 149 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 69 138 1.3E-6 T 14-10-2018 IPR018660 C-type lysozyme inhibitor DDU33_03890 4dc94703d5e506f38885f32f40ab81a2 149 SUPERFAMILY SSF141488 63 141 5.75E-5 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DDU33_06130 0f78ae84343f9595e53886c4e04e394d 292 Pfam PF01513 ATP-NAD kinase 7 271 5.4E-75 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DDU33_06130 0f78ae84343f9595e53886c4e04e394d 292 Gene3D G3DSA:3.40.50.10330 29 287 3.1E-92 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DDU33_06130 0f78ae84343f9595e53886c4e04e394d 292 SUPERFAMILY SSF111331 7 288 2.49E-91 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DDU33_06130 0f78ae84343f9595e53886c4e04e394d 292 Gene3D G3DSA:2.60.200.30 127 264 3.1E-92 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DDU33_06130 0f78ae84343f9595e53886c4e04e394d 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 34.611 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DDU33_06055 fd94ac6a9da906e06441d3adf7bf7f5e 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 144 1.2E-19 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DDU33_06055 fd94ac6a9da906e06441d3adf7bf7f5e 146 Gene3D G3DSA:3.30.420.270 59 137 8.4E-22 T 14-10-2018 DDU33_06055 fd94ac6a9da906e06441d3adf7bf7f5e 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 144 26.5 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 DDU33_05185 f00355b37a87febaa4ab39ae954c2ead 230 Gene3D G3DSA:3.20.20.10 1 228 1.5E-87 T 14-10-2018 IPR029066 PLP-binding barrel DDU33_05185 f00355b37a87febaa4ab39ae954c2ead 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 224 1.7E-95 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DDU33_05185 f00355b37a87febaa4ab39ae954c2ead 230 PIRSF PIRSF004848 1 229 2.2E-81 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DDU33_05185 f00355b37a87febaa4ab39ae954c2ead 230 SUPERFAMILY SSF51419 1 222 1.44E-82 T 14-10-2018 IPR029066 PLP-binding barrel DDU33_05185 f00355b37a87febaa4ab39ae954c2ead 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DDU33_05185 f00355b37a87febaa4ab39ae954c2ead 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 223 34.794 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DDU33_05185 f00355b37a87febaa4ab39ae954c2ead 230 Pfam PF01168 Alanine racemase, N-terminal domain 6 224 2.1E-33 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DDU33_01300 6cc9b5bd49674cdf38c6a277a91bcfc9 679 Gene3D G3DSA:3.40.710.10 405 584 7.5E-100 T 14-10-2018 DDU33_01300 6cc9b5bd49674cdf38c6a277a91bcfc9 679 SUPERFAMILY SSF56519 86 343 1.73E-32 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DDU33_01300 6cc9b5bd49674cdf38c6a277a91bcfc9 679 Pfam PF00905 Penicillin binding protein transpeptidase domain 370 661 6.9E-78 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDU33_01300 6cc9b5bd49674cdf38c6a277a91bcfc9 679 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 38 677 40.122 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DDU33_01300 6cc9b5bd49674cdf38c6a277a91bcfc9 679 Gene3D G3DSA:3.30.450.330 346 657 7.5E-100 T 14-10-2018 DDU33_01300 6cc9b5bd49674cdf38c6a277a91bcfc9 679 Pfam PF03717 Penicillin-binding Protein dimerisation domain 89 330 1.3E-16 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DDU33_01300 6cc9b5bd49674cdf38c6a277a91bcfc9 679 SUPERFAMILY SSF56601 296 673 1.02E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_07365 7b79c9bd71d1ab853d2d6fb5950b7c31 528 PIRSF PIRSF002741 17 519 5.6E-78 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DDU33_07365 7b79c9bd71d1ab853d2d6fb5950b7c31 528 Gene3D G3DSA:3.40.190.10 204 507 7.5E-99 T 14-10-2018 DDU33_07365 7b79c9bd71d1ab853d2d6fb5950b7c31 528 Gene3D G3DSA:3.10.105.10 280 501 7.5E-99 T 14-10-2018 DDU33_07365 7b79c9bd71d1ab853d2d6fb5950b7c31 528 Gene3D G3DSA:3.90.76.10 59 203 7.5E-99 T 14-10-2018 DDU33_07365 7b79c9bd71d1ab853d2d6fb5950b7c31 528 SUPERFAMILY SSF53850 57 527 1.99E-105 T 14-10-2018 DDU33_07365 7b79c9bd71d1ab853d2d6fb5950b7c31 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 431 1.8E-72 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DDU33_08160 e51a6cdd716144358c2dab9936ddc0e4 87 Gene3D G3DSA:3.40.50.300 1 84 2.1E-19 T 14-10-2018 DDU33_08160 e51a6cdd716144358c2dab9936ddc0e4 87 Pfam PF00005 ABC transporter 22 63 1.9E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_08160 e51a6cdd716144358c2dab9936ddc0e4 87 SUPERFAMILY SSF52540 9 62 2.13E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 SUPERFAMILY SSF102114 4 441 2.22E-145 T 14-10-2018 DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 Gene3D G3DSA:1.10.10.920 362 455 3.5E-32 T 14-10-2018 DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 SMART SM00729 50 270 1.8E-52 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 Gene3D G3DSA:3.80.30.20 1 361 8.2E-136 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 PIRSF PIRSF000167 1 452 7.6E-169 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 455 3.3E-210 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 Pfam PF04055 Radical SAM superfamily 55 226 9.5E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_09685 edb4be7538b52ffc0e9977d2fe90097d 455 Pfam PF06969 HemN C-terminal domain 361 429 4.4E-10 T 14-10-2018 IPR010723 HemN, C-terminal DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 Gene3D G3DSA:3.30.565.10 303 466 9.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 SUPERFAMILY SSF47384 223 299 1.24E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 SMART SM00387 348 468 1.3E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 466 1.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 SUPERFAMILY SSF158472 183 235 6.54E-5 T 14-10-2018 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 Gene3D G3DSA:3.30.450.210 34 150 5.5E-5 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 297 9.4E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 Pfam PF00672 HAMP domain 183 233 3.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 9.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 9.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 9.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 9.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 SMART SM00304 183 237 7.5E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 SMART SM00388 238 300 1.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 SUPERFAMILY SSF55874 290 466 9.17E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_08430 a7b9cc31cb192fee1612ecf570ce43ac 469 Gene3D G3DSA:1.10.287.130 187 301 1.5E-29 T 14-10-2018 DDU33_04975 7109c398d5ec4748c71c6a94cb345a25 70 Gene3D G3DSA:1.20.58.660 1 70 4.0E-27 T 14-10-2018 DDU33_04975 7109c398d5ec4748c71c6a94cb345a25 70 Pfam PF04325 Protein of unknown function (DUF465) 19 66 6.0E-17 T 14-10-2018 IPR007420 Protein of unknown function DUF465 DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 Gene3D G3DSA:3.30.1240.10 86 190 5.4E-63 T 14-10-2018 DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 235 7.6E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 264 3.9E-58 T 14-10-2018 DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 7 18 - T 14-10-2018 DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 SUPERFAMILY SSF56784 5 267 6.1E-59 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 8 263 3.3E-49 T 14-10-2018 IPR000150 Cof family GO:0016787 DDU33_07260 fb971db1df48a27e33036495ba0ef8cc 271 Gene3D G3DSA:3.40.50.1000 8 260 5.4E-63 T 14-10-2018 IPR023214 HAD superfamily DDU33_08605 c9c236fbb9653bd6e9694c4bb4e546f1 313 Pfam PF01032 FecCD transport family 23 310 2.2E-50 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DDU33_08605 c9c236fbb9653bd6e9694c4bb4e546f1 313 Gene3D G3DSA:1.10.3470.10 2 313 5.1E-52 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_08605 c9c236fbb9653bd6e9694c4bb4e546f1 313 SUPERFAMILY SSF81345 6 310 6.15E-54 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_10760 b0a5aa31d7746d602f557e14cbc29543 65 Pfam PF00403 Heavy-metal-associated domain 5 62 1.6E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDU33_10760 b0a5aa31d7746d602f557e14cbc29543 65 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DDU33_10760 b0a5aa31d7746d602f557e14cbc29543 65 SUPERFAMILY SSF55008 2 64 4.84E-19 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DDU33_10760 b0a5aa31d7746d602f557e14cbc29543 65 Gene3D G3DSA:3.30.70.100 2 65 1.2E-21 T 14-10-2018 DDU33_02415 920d85ba05d2103e4664e0ac253f2428 99 Pfam PF04359 Protein of unknown function (DUF493) 19 99 1.4E-25 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 DDU33_02415 920d85ba05d2103e4664e0ac253f2428 99 SUPERFAMILY SSF117991 15 99 3.53E-26 T 14-10-2018 IPR027471 YbeD-like domain superfamily DDU33_02415 920d85ba05d2103e4664e0ac253f2428 99 Gene3D G3DSA:3.30.70.260 14 99 8.9E-27 T 14-10-2018 DDU33_02415 920d85ba05d2103e4664e0ac253f2428 99 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 13 99 24.506 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 PIRSF PIRSF006076 1 795 4.6E-231 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Gene3D G3DSA:2.40.160.50 423 795 2.1E-140 T 14-10-2018 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 795 23.992 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Pfam PF01103 Surface antigen 446 795 4.7E-91 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Gene3D G3DSA:3.10.20.310 89 169 9.0E-15 T 14-10-2018 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Gene3D G3DSA:3.10.20.310 263 344 7.2E-14 T 14-10-2018 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Pfam PF07244 Surface antigen variable number repeat 345 419 1.8E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Pfam PF07244 Surface antigen variable number repeat 263 342 4.4E-8 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Pfam PF07244 Surface antigen variable number repeat 91 169 5.1E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Pfam PF07244 Surface antigen variable number repeat 173 260 5.1E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 21 795 2.7E-256 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Gene3D G3DSA:3.10.20.310 345 422 4.5E-21 T 14-10-2018 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Gene3D G3DSA:3.10.20.310 15 88 3.0E-13 T 14-10-2018 DDU33_06275 0d10f8cf2415bafcb48929d53d321537 795 Gene3D G3DSA:3.10.20.310 172 262 6.2E-23 T 14-10-2018 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 SMART SM00434 11 498 5.0E-295 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.6E-156 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Gene3D G3DSA:2.120.10.90 534 757 2.4E-80 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Gene3D G3DSA:2.120.10.90 758 873 4.2E-39 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Gene3D G3DSA:3.30.1360.40 236 332 3.1E-230 T 14-10-2018 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Gene3D G3DSA:1.10.268.10 369 492 3.1E-230 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 4.4E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 692 9.1E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 775 821 1.2E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 825 871 1.9E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 731 3.1E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 639 1.1E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Gene3D G3DSA:3.90.199.10 33 520 3.1E-230 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 SUPERFAMILY SSF101904 532 883 6.67E-105 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 872 0.0 T 14-10-2018 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 873 24.318 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DDU33_06930 339fb6de494ad7261dfec549d6bcad3a 885 SUPERFAMILY SSF56719 30 520 4.58E-182 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DDU33_02615 7c3bf0b0e3e2545ee4cc69a374513dbb 76 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 1 65 5.0E-18 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 DDU33_02615 7c3bf0b0e3e2545ee4cc69a374513dbb 76 Pfam PF10688 Bacterial inner membrane protein 3 67 5.4E-8 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Pfam PF02926 THUMP domain 31 156 4.0E-14 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 444 674 3.6E-22 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 711 31.564 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 PIRSF PIRSF037618 2 712 7.2E-301 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Gene3D G3DSA:3.30.750.80 401 492 1.3E-34 T 14-10-2018 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 SUPERFAMILY SSF53335 145 374 4.42E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Gene3D G3DSA:3.40.50.150 172 374 1.0E-135 T 14-10-2018 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Pfam PF01170 Putative RNA methylase family UPF0020 165 377 6.3E-66 T 14-10-2018 IPR000241 Putative RNA methylase domain DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 SUPERFAMILY SSF53335 404 712 1.72E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Gene3D G3DSA:3.40.50.150 493 711 2.0E-73 T 14-10-2018 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 SMART SM00981 59 157 1.9E-18 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 Gene3D G3DSA:3.30.2130.30 8 258 1.0E-135 T 14-10-2018 DDU33_00200 b2bfc7e98f0828751c62065a9908c726 712 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 14-10-2018 IPR000241 Putative RNA methylase domain DDU33_07560 6f25067c2a491258c7425a45c194c36c 262 SUPERFAMILY SSF51735 6 253 6.5E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_07560 6f25067c2a491258c7425a45c194c36c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_07560 6f25067c2a491258c7425a45c194c36c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 5.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_07560 6f25067c2a491258c7425a45c194c36c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_07560 6f25067c2a491258c7425a45c194c36c 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 7.7E-85 T 14-10-2018 DDU33_07560 6f25067c2a491258c7425a45c194c36c 262 Gene3D G3DSA:3.40.50.720 1 262 2.6E-61 T 14-10-2018 DDU33_07560 6f25067c2a491258c7425a45c194c36c 262 PIRSF PIRSF000094 1 260 2.4E-122 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_02280 7104562d241060f49a52017122272e64 440 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 332 400 4.7E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DDU33_02280 7104562d241060f49a52017122272e64 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 179 326 8.4E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDU33_02280 7104562d241060f49a52017122272e64 440 SUPERFAMILY SSF52540 3 438 1.48E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02280 7104562d241060f49a52017122272e64 440 Gene3D G3DSA:1.10.8.60 332 437 2.5E-39 T 14-10-2018 DDU33_02280 7104562d241060f49a52017122272e64 440 SMART SM01086 332 426 2.1E-19 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DDU33_02280 7104562d241060f49a52017122272e64 440 SMART SM00382 48 329 2.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_02280 7104562d241060f49a52017122272e64 440 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 440 42.5 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DDU33_02280 7104562d241060f49a52017122272e64 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 98 1.5E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DDU33_02280 7104562d241060f49a52017122272e64 440 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 440 1.1E-221 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DDU33_02590 3b776c72a653dd3d5ad1c1e01e94dc9c 444 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 375 2.8E-142 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDU33_02590 3b776c72a653dd3d5ad1c1e01e94dc9c 444 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 1.2E-139 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDU33_02590 3b776c72a653dd3d5ad1c1e01e94dc9c 444 PIRSF PIRSF004539 1 444 6.4E-167 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 3.6E-85 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.8E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.8E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.8E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.8E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.8E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.0E-62 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 SUPERFAMILY SSF53098 3 155 3.03E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.81 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DDU33_04855 92d444bb62484072d1d9af37f19d62dc 192 Gene3D G3DSA:3.30.420.10 2 159 1.0E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_07385 58a1c7e533d200bf11b73a8f690bb186 264 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 228 2.9E-19 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DDU33_07385 58a1c7e533d200bf11b73a8f690bb186 264 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.3E-136 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DDU33_07385 58a1c7e533d200bf11b73a8f690bb186 264 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.863 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DDU33_07385 58a1c7e533d200bf11b73a8f690bb186 264 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DDU33_07385 58a1c7e533d200bf11b73a8f690bb186 264 Gene3D G3DSA:3.40.50.1360 1 263 3.2E-112 T 14-10-2018 DDU33_07385 58a1c7e533d200bf11b73a8f690bb186 264 SUPERFAMILY SSF100950 1 260 3.02E-103 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 Pfam PF03459 TOBE domain 125 188 6.7E-15 T 14-10-2018 IPR005116 Transport-associated OB, type 1 DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 Pfam PF03459 TOBE domain 196 251 2.2E-5 T 14-10-2018 IPR005116 Transport-associated OB, type 1 DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 Gene3D G3DSA:2.40.50.100 122 250 1.0E-27 T 14-10-2018 DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 SUPERFAMILY SSF46785 4 106 6.6E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 84 2.7E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 Gene3D G3DSA:1.10.10.10 2 108 2.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 17 111 2.3E-35 T 14-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 SUPERFAMILY SSF50331 174 251 4.95E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 SUPERFAMILY SSF50331 123 191 3.64E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 Gene3D G3DSA:2.40.50.100 182 245 1.0E-27 T 14-10-2018 DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 PIRSF PIRSF005763 1 254 2.4E-76 T 14-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 DDU33_09535 a4815e747e8538d04eb9bf9d7b481da6 254 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 189 4.7E-21 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 DDU33_03470 37054a6ae2918e785d1de0c1f53768bc 81 Gene3D G3DSA:3.30.1360.60 2 81 8.4E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DDU33_03470 37054a6ae2918e785d1de0c1f53768bc 81 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDU33_03470 37054a6ae2918e785d1de0c1f53768bc 81 Pfam PF00367 phosphotransferase system, EIIB 9 40 4.0E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DDU33_03470 37054a6ae2918e785d1de0c1f53768bc 81 SUPERFAMILY SSF55604 7 79 2.88E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DDU33_05620 09a015aaad7d15747968091242a9b894 74 Gene3D G3DSA:3.30.70.20 15 74 2.8E-5 T 14-10-2018 DDU33_05620 09a015aaad7d15747968091242a9b894 74 Pfam PF00037 4Fe-4S binding domain 49 69 8.2E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_05620 09a015aaad7d15747968091242a9b894 74 SUPERFAMILY SSF54862 46 69 4.0E-6 T 14-10-2018 DDU33_01250 d3ca7535eb273737e013e3f8340f5a1a 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 150 3.4E-49 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DDU33_01250 d3ca7535eb273737e013e3f8340f5a1a 151 Gene3D G3DSA:2.70.40.10 1 151 1.3E-54 T 14-10-2018 IPR036157 dUTPase-like superfamily DDU33_01250 d3ca7535eb273737e013e3f8340f5a1a 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 33.245 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DDU33_01250 d3ca7535eb273737e013e3f8340f5a1a 151 Pfam PF00692 dUTPase 16 149 5.9E-43 T 14-10-2018 IPR029054 dUTPase-like DDU33_01250 d3ca7535eb273737e013e3f8340f5a1a 151 SUPERFAMILY SSF51283 1 150 1.02E-54 T 14-10-2018 IPR036157 dUTPase-like superfamily DDU33_02110 f6d233b19276ca7ba370e89696b76540 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02110 f6d233b19276ca7ba370e89696b76540 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02110 f6d233b19276ca7ba370e89696b76540 37 SUPERFAMILY SSF57840 1 37 2.35E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02110 f6d233b19276ca7ba370e89696b76540 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 9.8E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02110 f6d233b19276ca7ba370e89696b76540 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 5.0E-9 T 14-10-2018 DDU33_02110 f6d233b19276ca7ba370e89696b76540 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.329 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01425 1a78e8914b557a0e4b03f668aa74576b 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 3.0E-21 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 DDU33_01425 1a78e8914b557a0e4b03f668aa74576b 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 261 37.966 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 DDU33_01425 1a78e8914b557a0e4b03f668aa74576b 275 SUPERFAMILY SSF56300 13 259 1.02E-55 T 14-10-2018 DDU33_01425 1a78e8914b557a0e4b03f668aa74576b 275 Gene3D G3DSA:3.60.21.10 3 271 3.4E-67 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DDU33_01425 1a78e8914b557a0e4b03f668aa74576b 275 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 1.5E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 Gene3D G3DSA:1.20.1720.10 20 266 9.3E-41 T 14-10-2018 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 Pfam PF07690 Major Facilitator Superfamily 24 414 2.8E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 Gene3D G3DSA:1.20.1250.20 267 469 2.0E-18 T 14-10-2018 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 SUPERFAMILY SSF103473 18 466 4.05E-54 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 3.2E-12 T 14-10-2018 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 3.2E-12 T 14-10-2018 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 307 331 3.2E-12 T 14-10-2018 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 169 193 3.2E-12 T 14-10-2018 DDU33_02890 a0a08e0b0d4dd626c30b0829ef57bedd 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 3.2E-12 T 14-10-2018 DDU33_09770 840b1461d50aff526375e82fac4a2d9c 213 Gene3D G3DSA:2.50.20.10 23 206 2.6E-49 T 14-10-2018 DDU33_09770 840b1461d50aff526375e82fac4a2d9c 213 SUPERFAMILY SSF89392 27 206 1.69E-53 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DDU33_09770 840b1461d50aff526375e82fac4a2d9c 213 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 12 205 31.648 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DDU33_09770 840b1461d50aff526375e82fac4a2d9c 213 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 37 195 4.3E-54 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DDU33_09770 840b1461d50aff526375e82fac4a2d9c 213 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 206 2.9E-82 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 SUPERFAMILY SSF50465 298 393 2.45E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.149 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 SUPERFAMILY SSF50447 205 301 1.57E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 Gene3D G3DSA:2.40.30.10 206 334 2.1E-52 T 14-10-2018 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 Gene3D G3DSA:2.40.30.10 338 393 2.2E-30 T 14-10-2018 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.5E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 Gene3D G3DSA:3.40.50.300 1 203 2.7E-70 T 14-10-2018 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 SUPERFAMILY SSF52540 6 219 2.17E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.3E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 394 4.1E-238 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DDU33_03850 897dc26922e67c608273ffc3ab6428ca 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.7E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 Gene3D G3DSA:1.20.1560.10 3 319 2.6E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 SUPERFAMILY SSF90123 4 317 1.02E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 Gene3D G3DSA:3.40.50.300 328 576 3.4E-73 T 14-10-2018 DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 Pfam PF00664 ABC transporter transmembrane region 19 284 5.6E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 Pfam PF00005 ABC transporter 351 499 1.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 SUPERFAMILY SSF52540 332 569 4.02E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10185 be07743cf6a83fd9d33513ad127f8a55 584 SMART SM00382 360 544 3.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_03615 100b83383149adb16947a9aff62f5142 253 SMART SM00420 9 61 1.2E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_03615 100b83383149adb16947a9aff62f5142 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DDU33_03615 100b83383149adb16947a9aff62f5142 253 Pfam PF00455 DeoR C terminal sensor domain 77 231 1.1E-43 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DDU33_03615 100b83383149adb16947a9aff62f5142 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 64 3.8E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_03615 100b83383149adb16947a9aff62f5142 253 SUPERFAMILY SSF100950 77 233 7.74E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_03615 100b83383149adb16947a9aff62f5142 253 Gene3D G3DSA:1.10.10.10 1 58 1.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03615 100b83383149adb16947a9aff62f5142 253 SUPERFAMILY SSF46785 7 65 2.05E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_03615 100b83383149adb16947a9aff62f5142 253 SMART SM01134 73 233 4.1E-56 T 14-10-2018 DDU33_03615 100b83383149adb16947a9aff62f5142 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_03615 100b83383149adb16947a9aff62f5142 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DDU33_03585 4c325d42652cff287541856443daf5e5 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDU33_03585 4c325d42652cff287541856443daf5e5 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDU33_03585 4c325d42652cff287541856443daf5e5 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDU33_03585 4c325d42652cff287541856443daf5e5 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDU33_03585 4c325d42652cff287541856443daf5e5 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DDU33_03585 4c325d42652cff287541856443daf5e5 458 Pfam PF02254 TrkA-N domain 235 350 2.1E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DDU33_03585 4c325d42652cff287541856443daf5e5 458 Pfam PF02254 TrkA-N domain 3 124 8.0E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DDU33_03585 4c325d42652cff287541856443daf5e5 458 SUPERFAMILY SSF116726 390 441 5.49E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_03585 4c325d42652cff287541856443daf5e5 458 SUPERFAMILY SSF116726 149 226 7.72E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_03585 4c325d42652cff287541856443daf5e5 458 Gene3D G3DSA:3.40.50.720 2 139 1.5E-45 T 14-10-2018 DDU33_03585 4c325d42652cff287541856443daf5e5 458 Gene3D G3DSA:3.30.70.1450 140 232 2.2E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_03585 4c325d42652cff287541856443daf5e5 458 Pfam PF02080 TrkA-C domain 391 451 2.4E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDU33_03585 4c325d42652cff287541856443daf5e5 458 Pfam PF02080 TrkA-C domain 156 225 1.7E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DDU33_03585 4c325d42652cff287541856443daf5e5 458 SUPERFAMILY SSF51735 1 151 3.23E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_03585 4c325d42652cff287541856443daf5e5 458 Gene3D G3DSA:3.40.50.720 233 366 7.8E-36 T 14-10-2018 DDU33_03585 4c325d42652cff287541856443daf5e5 458 Gene3D G3DSA:3.30.70.1450 367 458 1.7E-27 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DDU33_03585 4c325d42652cff287541856443daf5e5 458 SUPERFAMILY SSF51735 231 376 1.73E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_02865 d52b67755d61227081e18539db4cb8ae 330 Pfam PF13310 Virulence protein RhuM family 61 130 1.7E-27 T 14-10-2018 IPR011204 Virulence protein RhuM-like DDU33_02865 d52b67755d61227081e18539db4cb8ae 330 Gene3D G3DSA:1.20.120.1870 190 326 2.4E-14 T 14-10-2018 DDU33_02865 d52b67755d61227081e18539db4cb8ae 330 Pfam PF02661 Fic/DOC family 202 280 9.1E-9 T 14-10-2018 IPR003812 Fido domain DDU33_02865 d52b67755d61227081e18539db4cb8ae 330 SUPERFAMILY SSF140931 246 321 2.22E-7 T 14-10-2018 IPR036597 Fido-like domain superfamily DDU33_03100 585392d71101641c66c75fd6fc68b80d 157 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 4 131 25.889 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 DDU33_03100 585392d71101641c66c75fd6fc68b80d 157 Gene3D G3DSA:3.10.450.50 1 157 1.5E-52 T 14-10-2018 DDU33_03100 585392d71101641c66c75fd6fc68b80d 157 SUPERFAMILY SSF103642 136 156 6.38E-8 T 14-10-2018 DDU33_03100 585392d71101641c66c75fd6fc68b80d 157 Pfam PF02810 SEC-C motif 139 154 3.7E-7 T 14-10-2018 IPR004027 SEC-C motif DDU33_03100 585392d71101641c66c75fd6fc68b80d 157 Pfam PF02810 SEC-C motif 5 22 1.0E-4 T 14-10-2018 IPR004027 SEC-C motif DDU33_03100 585392d71101641c66c75fd6fc68b80d 157 SUPERFAMILY SSF54427 29 132 1.05E-31 T 14-10-2018 IPR032710 NTF2-like domain superfamily DDU33_03160 d6c685519da4431ba3dd412224f9b0bd 238 Gene3D G3DSA:1.10.3720.10 20 235 2.3E-46 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_03160 d6c685519da4431ba3dd412224f9b0bd 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 231 1.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_03160 d6c685519da4431ba3dd412224f9b0bd 238 SUPERFAMILY SSF161098 25 233 1.03E-40 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_03160 d6c685519da4431ba3dd412224f9b0bd 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 127 6.8E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DDU33_01380 4c7abf363e7d8a53ca9028d9c73dc85f 292 Pfam PF04321 RmlD substrate binding domain 3 287 8.0E-107 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DDU33_01380 4c7abf363e7d8a53ca9028d9c73dc85f 292 Gene3D G3DSA:3.40.50.720 5 278 6.1E-109 T 14-10-2018 DDU33_01380 4c7abf363e7d8a53ca9028d9c73dc85f 292 SUPERFAMILY SSF51735 1 289 1.75E-102 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_01380 4c7abf363e7d8a53ca9028d9c73dc85f 292 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 286 1.1E-104 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DDU33_01380 4c7abf363e7d8a53ca9028d9c73dc85f 292 Gene3D G3DSA:3.90.25.10 159 285 6.1E-109 T 14-10-2018 DDU33_03710 c9e23fe281da61e757643a72c27bb6aa 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.001 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DDU33_03710 c9e23fe281da61e757643a72c27bb6aa 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_03710 c9e23fe281da61e757643a72c27bb6aa 427 Gene3D G3DSA:3.90.1150.10 8 418 3.4E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_03710 c9e23fe281da61e757643a72c27bb6aa 427 Pfam PF00202 Aminotransferase class-III 32 396 1.9E-78 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_03710 c9e23fe281da61e757643a72c27bb6aa 427 Gene3D G3DSA:3.40.640.10 69 317 3.4E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_03710 c9e23fe281da61e757643a72c27bb6aa 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 7.4E-196 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DDU33_03710 c9e23fe281da61e757643a72c27bb6aa 427 SUPERFAMILY SSF53383 1 425 3.5E-140 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 SUPERFAMILY SSF52141 3 219 2.03E-93 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 211 8.0E-89 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 Pfam PF03167 Uracil DNA glycosylase superfamily 52 206 1.0E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 218 40.06 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 SMART SM00987 46 207 8.9E-41 T 14-10-2018 DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 SMART SM00986 46 207 8.9E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_10190 b65b4befb11dbf74728e34e56c2fc140 223 Gene3D G3DSA:3.40.470.10 1 223 1.7E-101 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 Gene3D G3DSA:3.40.630.40 17 260 5.0E-71 T 14-10-2018 DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 Pfam PF01476 LysM domain 339 380 2.3E-10 T 14-10-2018 IPR018392 LysM domain DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 SMART SM00257 338 381 2.5E-9 T 14-10-2018 IPR018392 LysM domain DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 SUPERFAMILY SSF54106 338 380 1.57E-9 T 14-10-2018 DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 SMART SM00646 88 247 2.5E-59 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 SUPERFAMILY SSF53187 25 249 4.08E-50 T 14-10-2018 DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 27 247 1.2E-48 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DDU33_00020 3d7a4b734229fc31ce128f9713575955 381 Gene3D G3DSA:3.10.350.10 323 381 7.2E-13 T 14-10-2018 IPR036779 LysM domain superfamily DDU33_04750 369904f43c706c6b0bd58f00f598395a 323 Gene3D G3DSA:3.60.120.10 6 323 1.9E-71 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DDU33_04750 369904f43c706c6b0bd58f00f598395a 323 SUPERFAMILY SSF56322 62 323 5.76E-66 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DDU33_04750 369904f43c706c6b0bd58f00f598395a 323 PRINTS PR00095 Anthranilate synthase component I signature 257 271 1.1E-8 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_04750 369904f43c706c6b0bd58f00f598395a 323 PRINTS PR00095 Anthranilate synthase component I signature 271 285 1.1E-8 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_04750 369904f43c706c6b0bd58f00f598395a 323 PRINTS PR00095 Anthranilate synthase component I signature 159 172 1.1E-8 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_04750 369904f43c706c6b0bd58f00f598395a 323 PRINTS PR00095 Anthranilate synthase component I signature 173 186 1.1E-8 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DDU33_04750 369904f43c706c6b0bd58f00f598395a 323 Pfam PF00425 chorismate binding enzyme 71 315 2.7E-60 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DDU33_04170 354c8244da3328460ae8931e3419addc 192 SUPERFAMILY SSF48150 7 187 1.33E-78 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DDU33_04170 354c8244da3328460ae8931e3419addc 192 Gene3D G3DSA:1.10.340.30 6 191 1.3E-83 T 14-10-2018 DDU33_04170 354c8244da3328460ae8931e3419addc 192 Pfam PF03352 Methyladenine glycosylase 11 186 1.7E-76 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DDU33_04170 354c8244da3328460ae8931e3419addc 192 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 8 186 1.7E-79 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 Gene3D G3DSA:3.40.50.1220 179 341 1.2E-52 T 14-10-2018 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 376 524 3.0E-44 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 Gene3D G3DSA:3.40.50.970 343 551 1.1E-63 T 14-10-2018 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 548 9.2E-209 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 1.2E-43 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 413 432 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 SUPERFAMILY SSF52518 1 170 1.88E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 1.3E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 Gene3D G3DSA:3.40.50.970 1 176 1.0E-66 T 14-10-2018 DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 SUPERFAMILY SSF52467 184 341 1.18E-56 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DDU33_04910 cc70452622f738a0ccd983275b7d32b6 551 SUPERFAMILY SSF52518 353 548 1.81E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 Gene3D G3DSA:1.10.150.20 67 143 2.8E-28 T 14-10-2018 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 SUPERFAMILY SSF50249 1 63 2.63E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 1.8E-69 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.9E-17 T 14-10-2018 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 31.579 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 Pfam PF01330 RuvA N terminal domain 1 62 4.1E-20 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 SUPERFAMILY SSF47781 66 138 6.67E-22 T 14-10-2018 IPR010994 RuvA domain 2-like DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 Pfam PF07499 RuvA, C-terminal domain 157 197 5.2E-14 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 Gene3D G3DSA:1.10.8.10 153 200 4.3E-18 T 14-10-2018 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 SMART SM00278 73 92 0.18 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 SMART SM00278 108 127 0.0039 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 Gene3D G3DSA:2.40.50.140 1 66 3.1E-26 T 14-10-2018 DDU33_06160 a0ceadbcb952a56d1f694e6ec3e6c211 200 SUPERFAMILY SSF46929 156 198 2.62E-9 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily DDU33_08235 16cf0e1a616d62fbccfdc4ed6910ef5a 377 Gene3D G3DSA:3.90.1150.10 291 377 7.5E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_08235 16cf0e1a616d62fbccfdc4ed6910ef5a 377 PIRSF PIRSF001434 1 377 1.7E-115 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDU33_08235 16cf0e1a616d62fbccfdc4ed6910ef5a 377 Gene3D G3DSA:3.90.1150.10 258 290 1.1E-7 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_08235 16cf0e1a616d62fbccfdc4ed6910ef5a 377 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 373 2.1E-130 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDU33_08235 16cf0e1a616d62fbccfdc4ed6910ef5a 377 SUPERFAMILY SSF53383 11 375 3.5E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_08235 16cf0e1a616d62fbccfdc4ed6910ef5a 377 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DDU33_08235 16cf0e1a616d62fbccfdc4ed6910ef5a 377 Gene3D G3DSA:3.40.640.10 6 257 4.1E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_05680 93b55e0ce8a9e65bbd8da5121ebf47a4 148 SUPERFAMILY SSF57716 108 145 2.57E-10 T 14-10-2018 DDU33_05680 93b55e0ce8a9e65bbd8da5121ebf47a4 148 SUPERFAMILY SSF109635 6 106 4.97E-34 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily DDU33_05680 93b55e0ce8a9e65bbd8da5121ebf47a4 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 28.983 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DDU33_05680 93b55e0ce8a9e65bbd8da5121ebf47a4 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 5.9E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DDU33_05680 93b55e0ce8a9e65bbd8da5121ebf47a4 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DDU33_05680 93b55e0ce8a9e65bbd8da5121ebf47a4 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 3.3E-50 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DDU33_05680 93b55e0ce8a9e65bbd8da5121ebf47a4 148 Gene3D G3DSA:1.20.120.910 17 147 8.3E-36 T 14-10-2018 DDU33_07900 a97b920555fd615a88c4de5958a6dd6b 181 SUPERFAMILY SSF53955 12 180 5.06E-49 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_07900 a97b920555fd615a88c4de5958a6dd6b 181 Gene3D G3DSA:1.10.530.40 29 181 9.6E-41 T 14-10-2018 DDU33_07900 a97b920555fd615a88c4de5958a6dd6b 181 Pfam PF00959 Phage lysozyme 55 173 3.3E-29 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Gene3D G3DSA:1.20.1580.10 90 491 6.6E-245 T 14-10-2018 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 SUPERFAMILY SSF52540 612 910 3.42E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Gene3D G3DSA:3.30.190.20 130 244 6.6E-245 T 14-10-2018 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 SUPERFAMILY SSF52540 1 568 3.0E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Pfam PF00005 ABC transporter 791 859 5.0E-5 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.793 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Gene3D G3DSA:3.40.50.300 615 935 4.3E-142 T 14-10-2018 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Gene3D G3DSA:1.10.8.280 287 402 6.6E-245 T 14-10-2018 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Gene3D G3DSA:3.40.50.300 6 594 6.6E-245 T 14-10-2018 DDU33_09540 c43d343bb57c52f1c9ce34ae49777af4 942 Gene3D G3DSA:1.20.1580.10 691 829 4.3E-142 T 14-10-2018 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 Pfam PF00920 Dehydratase family 34 604 1.3E-218 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 SUPERFAMILY SSF143975 3 420 1.05E-133 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 Gene3D G3DSA:3.50.30.80 421 573 3.7E-54 T 14-10-2018 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.617 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 2.5E-264 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DDU33_10780 95184e9c59ff7f91d1bbd0104cd4e75e 611 SUPERFAMILY SSF52016 421 608 3.22E-60 T 14-10-2018 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 Pfam PF01926 50S ribosome-binding GTPase 11 125 3.7E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 Hamap MF_00367 GTPase Era [era]. 6 297 36.024 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 7.7E-38 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 SUPERFAMILY SSF54814 182 297 1.66E-42 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 4.6E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 4.6E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 SUPERFAMILY SSF52540 11 206 3.79E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 Pfam PF07650 KH domain 209 285 1.2E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 Gene3D G3DSA:3.40.50.300 3 184 2.5E-51 T 14-10-2018 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 4.6E-122 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_07485 1b5f5652f02e97090a152441f4d90d40 300 Gene3D G3DSA:3.30.300.20 186 300 1.6E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 368 384 2.2E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.2E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.2E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 318 330 2.2E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 414 431 2.2E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 Gene3D G3DSA:1.10.940.10 1 143 4.9E-43 T 14-10-2018 IPR035926 NusB-like superfamily DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 Gene3D G3DSA:1.10.287.730 145 170 3.2E-9 T 14-10-2018 DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 431 1.4E-161 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 SUPERFAMILY SSF53335 140 431 5.63E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 429 6.1E-72 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 SUPERFAMILY SSF48013 6 148 2.22E-35 T 14-10-2018 IPR035926 NusB-like superfamily DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 Pfam PF01029 NusB family 6 127 2.1E-23 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 Gene3D G3DSA:3.30.70.1170 171 230 3.2E-14 T 14-10-2018 DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 Gene3D G3DSA:3.40.50.150 231 432 2.2E-66 T 14-10-2018 DDU33_03590 36b0a175cfd878af72a1278527b6fc75 432 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 317 328 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 SUPERFAMILY SSF51735 123 281 4.07E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.113 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 7.8E-41 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 Gene3D G3DSA:3.40.50.10860 8 276 5.0E-110 T 14-10-2018 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 Gene3D G3DSA:3.40.50.720 6 259 5.0E-110 T 14-10-2018 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 SUPERFAMILY SSF53223 1 122 2.78E-40 T 14-10-2018 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 282 5.5E-71 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_09650 a1771222101b47f4d05cbf614ccdcf1b 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DDU33_06015 9e8c2f77c3b1f2e0a464367997f74e2f 109 ProDom PD065628 PM0975 PRECURSOR HI0310 SIGNAL 41 106 4.0E-22 T 14-10-2018 IPR020493 Uncharacterised protein family HI0310 DDU33_06015 9e8c2f77c3b1f2e0a464367997f74e2f 109 Pfam PF17274 Family of unknown function (DUF5339) 41 108 9.9E-23 T 14-10-2018 IPR020493 Uncharacterised protein family HI0310 DDU33_10335 7e44ebbc22b2f4135d6637dc4b1cdafd 458 Pfam PF03553 Na+/H+ antiporter family 161 452 3.4E-69 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DDU33_10335 7e44ebbc22b2f4135d6637dc4b1cdafd 458 Pfam PF13726 Na+-H+ antiporter family 4 98 8.8E-25 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 Gene3D G3DSA:1.20.5.1040 132 186 3.4E-5 T 14-10-2018 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 Gene3D G3DSA:1.20.5.1040 1 63 6.4E-6 T 14-10-2018 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 SUPERFAMILY SSF55874 292 452 7.07E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 450 1.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 SUPERFAMILY SSF47384 220 301 5.1E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 Gene3D G3DSA:1.10.287.130 189 304 1.0E-17 T 14-10-2018 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 SMART SM00388 237 303 7.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.8E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.8E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 302 4.9E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 SMART SM00387 348 458 1.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DDU33_06150 2cf0d5b0c6dd78ab0773adcce29fe3d5 460 Gene3D G3DSA:3.30.565.10 312 456 1.1E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_02330 ea9869e6cab31060b9271dbdbdc032f5 238 SMART SM01007 15 205 1.9E-68 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DDU33_02330 ea9869e6cab31060b9271dbdbdc032f5 238 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 203 2.7E-45 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DDU33_02330 ea9869e6cab31060b9271dbdbdc032f5 238 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 10 238 3.0E-120 T 14-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 DDU33_02330 ea9869e6cab31060b9271dbdbdc032f5 238 SUPERFAMILY SSF53639 11 230 1.16E-69 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DDU33_02330 ea9869e6cab31060b9271dbdbdc032f5 238 Gene3D G3DSA:3.40.225.10 9 238 4.3E-60 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DDU33_03430 48633eae67a082fb37fb9c70026dbb37 218 SMART SM01007 8 182 9.3E-62 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DDU33_03430 48633eae67a082fb37fb9c70026dbb37 218 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 56.584 T 14-10-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 DDU33_03430 48633eae67a082fb37fb9c70026dbb37 218 SUPERFAMILY SSF53639 1 211 1.04E-65 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DDU33_03430 48633eae67a082fb37fb9c70026dbb37 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 181 2.0E-45 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DDU33_03430 48633eae67a082fb37fb9c70026dbb37 218 Gene3D G3DSA:3.40.225.10 1 215 7.5E-77 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DDU33_10255 d9abf659f014ad1070ebc0fb92e030bb 624 SUPERFAMILY SSF109998 38 240 2.79E-26 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DDU33_10255 d9abf659f014ad1070ebc0fb92e030bb 624 Pfam PF13624 SurA N-terminal domain 1 164 4.4E-37 T 14-10-2018 DDU33_10255 d9abf659f014ad1070ebc0fb92e030bb 624 Gene3D G3DSA:3.10.50.40 260 382 3.5E-32 T 14-10-2018 DDU33_10255 d9abf659f014ad1070ebc0fb92e030bb 624 Pfam PF13145 PPIC-type PPIASE domain 248 371 2.9E-23 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DDU33_10255 d9abf659f014ad1070ebc0fb92e030bb 624 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 296 317 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DDU33_10255 d9abf659f014ad1070ebc0fb92e030bb 624 SUPERFAMILY SSF54534 225 357 1.31E-29 T 14-10-2018 DDU33_09430 0b7840e922c3f75e05b16d23e2f5c127 150 SUPERFAMILY SSF46785 2 133 1.47E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_09430 0b7840e922c3f75e05b16d23e2f5c127 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 3.6E-47 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DDU33_09430 0b7840e922c3f75e05b16d23e2f5c127 150 Gene3D G3DSA:1.10.10.10 1 143 1.2E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_09430 0b7840e922c3f75e05b16d23e2f5c127 150 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DDU33_09430 0b7840e922c3f75e05b16d23e2f5c127 150 Pfam PF02082 Transcriptional regulator 1 83 3.1E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DDU33_06515 bb9a6f564b608636583d3f19c3d506dd 179 Pfam PF02600 Disulfide bond formation protein DsbB 12 161 5.6E-43 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DDU33_06515 bb9a6f564b608636583d3f19c3d506dd 179 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 169 21.935 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB DDU33_06515 bb9a6f564b608636583d3f19c3d506dd 179 SUPERFAMILY SSF158442 15 163 1.03E-41 T 14-10-2018 IPR023380 DsbB-like superfamily DDU33_06515 bb9a6f564b608636583d3f19c3d506dd 179 Gene3D G3DSA:1.20.1550.10 1 177 1.0E-53 T 14-10-2018 IPR023380 DsbB-like superfamily DDU33_03540 a76e338958e6cc11422973eeaf240be1 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.4E-64 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DDU33_03540 a76e338958e6cc11422973eeaf240be1 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 1 200 33.423 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03540 a76e338958e6cc11422973eeaf240be1 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 1.0E-74 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03540 a76e338958e6cc11422973eeaf240be1 200 Gene3D G3DSA:3.40.1370.10 7 200 1.5E-68 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_03540 a76e338958e6cc11422973eeaf240be1 200 SUPERFAMILY SSF52166 9 199 1.7E-72 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_05375 91bc3e94b7e80930da401b3fd91eaa1c 162 Gene3D G3DSA:3.40.50.1240 1 161 1.3E-29 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_05375 91bc3e94b7e80930da401b3fd91eaa1c 162 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 100 2.6E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDU33_05375 91bc3e94b7e80930da401b3fd91eaa1c 162 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DDU33_05375 91bc3e94b7e80930da401b3fd91eaa1c 162 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 157 2.9E-33 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 DDU33_05375 91bc3e94b7e80930da401b3fd91eaa1c 162 PIRSF PIRSF000709 1 74 0.0028 T 14-10-2018 DDU33_05375 91bc3e94b7e80930da401b3fd91eaa1c 162 SUPERFAMILY SSF53254 1 150 4.3E-17 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DDU33_05375 91bc3e94b7e80930da401b3fd91eaa1c 162 SMART SM00855 2 126 2.7E-4 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DDU33_00245 15e9f5357666534673ca7be7aa2ea730 164 Pfam PF17283 SprT-like zinc ribbon domain 121 158 5.0E-8 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain DDU33_00245 15e9f5357666534673ca7be7aa2ea730 164 Hamap MF_00746 Protein SprT [sprT]. 9 161 37.694 T 14-10-2018 IPR023483 Uncharacterised protein family SprT DDU33_00245 15e9f5357666534673ca7be7aa2ea730 164 Pfam PF10263 SprT-like family 20 115 4.9E-18 T 14-10-2018 IPR006640 SprT-like DDU33_00245 15e9f5357666534673ca7be7aa2ea730 164 SMART SM00731 13 161 4.8E-50 T 14-10-2018 IPR006640 SprT-like DDU33_08030 48dd2369cd8421caccb41ede5de62acb 305 Pfam PF07409 Phage protein GP46 212 300 1.9E-31 T 14-10-2018 IPR010877 Bacteriophage Mu, Gp46 DDU33_08030 48dd2369cd8421caccb41ede5de62acb 305 SUPERFAMILY SSF69279 179 271 3.03E-6 T 14-10-2018 DDU33_08030 48dd2369cd8421caccb41ede5de62acb 305 SUPERFAMILY SSF69279 7 177 1.96E-50 T 14-10-2018 DDU33_08030 48dd2369cd8421caccb41ede5de62acb 305 Gene3D G3DSA:2.30.300.10 9 272 1.8E-70 T 14-10-2018 DDU33_08030 48dd2369cd8421caccb41ede5de62acb 305 Gene3D G3DSA:3.55.50.10 91 178 1.8E-70 T 14-10-2018 DDU33_08030 48dd2369cd8421caccb41ede5de62acb 305 Pfam PF05954 Phage late control gene D protein (GPD) 29 183 5.1E-7 T 14-10-2018 DDU33_08030 48dd2369cd8421caccb41ede5de62acb 305 Gene3D G3DSA:3.30.1920.10 201 267 1.8E-70 T 14-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 4.0E-38 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 SMART SM00411 3 92 3.5E-38 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.3E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.3E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.3E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 3.0E-30 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 Gene3D G3DSA:4.10.520.10 1 98 3.5E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 SUPERFAMILY SSF47729 3 94 6.62E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DDU33_08545 bd1c297255e0c383e2543fd41acad828 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 26.779 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 Pfam PF02556 Preprotein translocase subunit SecB 16 152 1.4E-51 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 Gene3D G3DSA:3.10.420.10 1 163 9.6E-60 T 14-10-2018 IPR035958 SecB-like superfamily DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 20 37 1.5E-37 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 132 150 1.5E-37 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 106 128 1.5E-37 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 82 102 1.5E-37 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 SUPERFAMILY SSF54611 9 150 3.92E-50 T 14-10-2018 IPR035958 SecB-like superfamily DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 32.171 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDU33_01725 911fd8923442049ca30b58f1af0d5119 163 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 16 156 1.2E-59 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DDU33_02250 4c857d876fc14a14725d1792b0d61ab5 89 PIRSF PIRSF029827 1 89 1.6E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDU33_02250 4c857d876fc14a14725d1792b0d61ab5 89 Gene3D G3DSA:1.10.3880.10 1 89 5.3E-37 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 DDU33_02250 4c857d876fc14a14725d1792b0d61ab5 89 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-36 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDU33_02250 4c857d876fc14a14725d1792b0d61ab5 89 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.4E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDU33_02250 4c857d876fc14a14725d1792b0d61ab5 89 SUPERFAMILY SSF111148 1 87 2.35E-38 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 DDU33_02250 4c857d876fc14a14725d1792b0d61ab5 89 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.256 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DDU33_04575 a136533e42ea6be7c0c2549124c653ab 541 Gene3D G3DSA:3.40.720.10 209 541 1.2E-90 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DDU33_04575 a136533e42ea6be7c0c2549124c653ab 541 SUPERFAMILY SSF53649 229 523 1.64E-23 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DDU33_04575 a136533e42ea6be7c0c2549124c653ab 541 Pfam PF00884 Sulfatase 228 520 4.3E-57 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DDU33_04575 a136533e42ea6be7c0c2549124c653ab 541 Pfam PF08019 Domain of unknown function (DUF1705) 52 202 1.2E-45 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 DDU33_03795 10f51e3582e9ab642715099f395ac391 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 45 218 9.2E-42 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DDU33_03795 10f51e3582e9ab642715099f395ac391 244 SUPERFAMILY SSF52402 17 206 1.68E-45 T 14-10-2018 DDU33_03795 10f51e3582e9ab642715099f395ac391 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 42 244 4.2E-52 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DDU33_03795 10f51e3582e9ab642715099f395ac391 244 Gene3D G3DSA:3.40.50.620 13 244 2.8E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_03795 10f51e3582e9ab642715099f395ac391 244 PIRSF PIRSF000857 10 244 1.8E-78 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DDU33_03795 10f51e3582e9ab642715099f395ac391 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 48 242 2.5E-76 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 Gene3D G3DSA:3.40.50.620 1 305 2.0E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 4.6E-195 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 SUPERFAMILY SSF47323 316 458 8.24E-41 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 2.1E-141 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 Pfam PF09190 DALR domain 341 402 4.0E-24 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.8E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 SMART SM00840 341 402 6.5E-28 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 SUPERFAMILY SSF52374 1 309 4.35E-102 T 14-10-2018 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.344 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DDU33_09345 e1f795bd53d6c87bfe8052cab256ca92 459 Gene3D G3DSA:1.20.120.640 306 458 3.5E-52 T 14-10-2018 DDU33_10050 8c3ce6a59cdfe435c8e141bea542e0dd 518 Pfam PF11398 Protein of unknown function (DUF2813) 1 346 8.6E-110 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 DDU33_10050 8c3ce6a59cdfe435c8e141bea542e0dd 518 SUPERFAMILY SSF52540 1 303 5.53E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10050 8c3ce6a59cdfe435c8e141bea542e0dd 518 Gene3D G3DSA:3.40.50.300 1 317 1.3E-14 T 14-10-2018 DDU33_06140 869267e387d5c51d0dce9e30b1e281d5 212 Pfam PF00551 Formyl transferase 2 182 5.1E-66 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_06140 869267e387d5c51d0dce9e30b1e281d5 212 Gene3D G3DSA:3.40.50.170 2 212 1.8E-79 T 14-10-2018 DDU33_06140 869267e387d5c51d0dce9e30b1e281d5 212 SUPERFAMILY SSF53328 2 205 3.79E-64 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_06140 869267e387d5c51d0dce9e30b1e281d5 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 29.875 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DDU33_06140 869267e387d5c51d0dce9e30b1e281d5 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 190 1.2E-76 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 156 718 5.8E-168 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 187 720 2.5E-109 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 SUPERFAMILY SSF81665 180 697 4.58E-14 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 421 427 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 138 718 8.7E-176 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 ProSitePatterns PS01229 Hypothetical cof family signature 2. 609 631 - T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 SUPERFAMILY SSF81653 222 319 4.58E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 Pfam PF00403 Heavy-metal-associated domain 10 64 1.5E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 SUPERFAMILY SSF55008 5 72 3.01E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 Gene3D G3DSA:3.40.50.1000 400 660 9.0E-84 T 14-10-2018 IPR023214 HAD superfamily DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 Gene3D G3DSA:2.70.150.20 213 324 1.3E-26 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 SUPERFAMILY SSF56784 417 715 1.03E-52 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 Gene3D G3DSA:3.40.1110.10 430 541 9.0E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 Gene3D G3DSA:3.30.70.100 1 76 4.7E-20 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00943 Copper-transporting ATPase signature 189 208 8.1E-10 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00943 Copper-transporting ATPase signature 586 603 8.1E-10 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00943 Copper-transporting ATPase signature 209 227 8.1E-10 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00943 Copper-transporting ATPase signature 342 356 8.1E-10 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00943 Copper-transporting ATPase signature 46 66 8.1E-10 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00943 Copper-transporting ATPase signature 141 160 8.1E-10 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 Pfam PF00122 E1-E2 ATPase 220 397 6.1E-44 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 Pfam PF00702 haloacid dehalogenase-like hydrolase 415 623 3.5E-43 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 545 1.7E-24 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 566 1.7E-24 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 628 1.7E-24 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 419 433 1.7E-24 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 269 283 1.7E-24 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 644 1.7E-24 T 14-10-2018 DDU33_10765 e11e06ec1cb1000525e4ecfa48ff438b 720 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 191 704 5.7E-85 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 SUPERFAMILY SSF53335 5 284 3.7E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 Gene3D G3DSA:1.10.8.10 1 90 3.6E-20 T 14-10-2018 DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 Gene3D G3DSA:3.40.50.150 93 287 7.7E-58 T 14-10-2018 DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 283 3.5E-89 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 284 1.3E-85 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 Pfam PF13847 Methyltransferase domain 120 277 1.7E-34 T 14-10-2018 IPR025714 Methyltransferase domain DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 11 287 41.808 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DDU33_04815 add664a82726fe500a2770b673cc6a9b 289 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 21 303 1.1E-133 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 SUPERFAMILY SSF53335 23 300 1.27E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_09460 df2788f64b3efd91361dac677935c64c 315 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 212 218 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 22 311 1.2E-98 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 14 308 51.228 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 Pfam PF05175 Methyltransferase small domain 141 225 1.7E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 PIRSF PIRSF037167 4 315 2.4E-146 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 Gene3D G3DSA:3.40.50.150 111 290 2.6E-47 T 14-10-2018 DDU33_09460 df2788f64b3efd91361dac677935c64c 315 Gene3D G3DSA:1.10.8.10 23 110 3.7E-7 T 14-10-2018 DDU33_04915 4638f10f19a476155b82dcfeee02b3cd 75 Gene3D G3DSA:3.30.70.260 1 75 1.4E-7 T 14-10-2018 DDU33_04915 4638f10f19a476155b82dcfeee02b3cd 75 SUPERFAMILY SSF55021 3 72 8.14E-10 T 14-10-2018 DDU33_04915 4638f10f19a476155b82dcfeee02b3cd 75 Pfam PF13710 ACT domain 12 71 9.3E-21 T 14-10-2018 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 1.7E-122 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 Gene3D G3DSA:3.50.50.60 117 243 1.2E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 4.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 SUPERFAMILY SSF51905 1 312 1.21E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.3E-40 T 14-10-2018 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 6.3E-40 T 14-10-2018 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 6.3E-40 T 14-10-2018 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 6.3E-40 T 14-10-2018 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.3E-40 T 14-10-2018 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 299 6.0E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDU33_00070 ae6d6d6ec603e35077ab91e09273e999 317 Gene3D G3DSA:3.50.50.60 9 311 1.2E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_09075 56ff8bc4ea647555aa75ce6f84322acd 109 PIRSF PIRSF017292 1 104 1.2E-40 T 14-10-2018 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type DDU33_09075 56ff8bc4ea647555aa75ce6f84322acd 109 Pfam PF05495 CHY zinc finger 14 86 2.2E-13 T 14-10-2018 IPR008913 Zinc finger, CHY-type GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 DDU33_09075 56ff8bc4ea647555aa75ce6f84322acd 109 SUPERFAMILY SSF161219 4 89 9.15E-18 T 14-10-2018 IPR037274 Zinc finger, CHY-type superfamily GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 341 43.155 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 Gene3D G3DSA:1.10.240.10 196 308 6.3E-141 T 14-10-2018 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.3E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 1.3E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 1.3E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.3E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 Pfam PF00579 tRNA synthetases class I (W and Y) 3 295 1.1E-88 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 SUPERFAMILY SSF52374 5 340 6.57E-99 T 14-10-2018 DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 Gene3D G3DSA:3.40.50.620 6 339 6.3E-141 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_00895 05187aefd09404e2d292b33263ca5a85 342 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 340 4.6E-119 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 1.5E-112 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 SMART SM00662 23 234 5.8E-109 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 Gene3D G3DSA:2.170.120.12 53 177 3.1E-86 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 2.3E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 35.031 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.6E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 Gene3D G3DSA:3.30.1360.10 17 228 3.1E-86 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 Gene3D G3DSA:1.10.150.20 244 329 9.0E-39 T 14-10-2018 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 2.7E-24 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 SUPERFAMILY SSF47789 251 325 1.18E-25 T 14-10-2018 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 SUPERFAMILY SSF55257 7 233 8.83E-31 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_02090 f453f8748cfb7d34d8e7374c64672a87 329 SUPERFAMILY SSF56553 53 178 3.27E-42 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DDU33_05600 364ba644bcd71335edb9a4268f0f9f74 250 Pfam PF08241 Methyltransferase domain 47 147 5.4E-17 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DDU33_05600 364ba644bcd71335edb9a4268f0f9f74 250 Gene3D G3DSA:3.40.50.150 27 250 1.6E-53 T 14-10-2018 DDU33_05600 364ba644bcd71335edb9a4268f0f9f74 250 SUPERFAMILY SSF53335 12 249 5.12E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_06460 ace9069c97b429f0fa13e6ee2dea10ab 260 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 3 244 32.764 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD DDU33_06460 ace9069c97b429f0fa13e6ee2dea10ab 260 Gene3D G3DSA:1.25.40.10 31 251 1.7E-51 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_06460 ace9069c97b429f0fa13e6ee2dea10ab 260 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 246 5.1E-71 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD DDU33_06460 ace9069c97b429f0fa13e6ee2dea10ab 260 SUPERFAMILY SSF48452 28 121 1.06E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_06460 ace9069c97b429f0fa13e6ee2dea10ab 260 Pfam PF13525 Outer membrane lipoprotein 30 237 3.7E-58 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like DDU33_02745 21af8aa713463e3716d53ea06e107275 187 SUPERFAMILY SSF52218 1 178 3.05E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_02745 21af8aa713463e3716d53ea06e107275 187 Pfam PF02525 Flavodoxin-like fold 2 171 1.7E-42 T 14-10-2018 IPR003680 Flavodoxin-like fold DDU33_02745 21af8aa713463e3716d53ea06e107275 187 Gene3D G3DSA:3.40.50.360 1 182 1.0E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_07720 0274bec00b746554293484749e59cf40 155 SUPERFAMILY SSF51197 1 155 1.59E-46 T 14-10-2018 DDU33_07720 0274bec00b746554293484749e59cf40 155 Pfam PF04074 Domain of unknown function (DUF386) 1 151 1.1E-39 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family DDU33_07720 0274bec00b746554293484749e59cf40 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 155 1.1E-42 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family DDU33_07720 0274bec00b746554293484749e59cf40 155 Gene3D G3DSA:2.60.120.370 1 155 1.9E-46 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily DDU33_09765 2d170a8251133ae9a94dec94c886e1cb 102 Pfam PF01371 Trp repressor protein 11 97 2.2E-29 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 DDU33_09765 2d170a8251133ae9a94dec94c886e1cb 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 11 94 2.0E-22 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDU33_09765 2d170a8251133ae9a94dec94c886e1cb 102 Gene3D G3DSA:1.10.1270.10 3 100 3.0E-32 T 14-10-2018 IPR038116 TrpR-like superfamily DDU33_09765 2d170a8251133ae9a94dec94c886e1cb 102 PIRSF PIRSF003196 2 102 3.8E-36 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDU33_09765 2d170a8251133ae9a94dec94c886e1cb 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 98 3.8E-35 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDU33_09765 2d170a8251133ae9a94dec94c886e1cb 102 Hamap MF_00475 Trp operon repressor [trpR]. 9 102 20.902 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DDU33_09765 2d170a8251133ae9a94dec94c886e1cb 102 SUPERFAMILY SSF48295 2 98 3.45E-29 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DDU33_01885 5261441caa596471f09bd5dbb0020b09 316 Gene3D G3DSA:3.40.50.300 3 316 9.6E-95 T 14-10-2018 DDU33_01885 5261441caa596471f09bd5dbb0020b09 316 SUPERFAMILY SSF52540 7 315 1.95E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_01885 5261441caa596471f09bd5dbb0020b09 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 4.2E-167 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DDU33_01885 5261441caa596471f09bd5dbb0020b09 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 243 1.8E-15 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DDU33_01885 5261441caa596471f09bd5dbb0020b09 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 179.973 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DDU33_01885 5261441caa596471f09bd5dbb0020b09 316 PIRSF PIRSF000545 1 316 4.7E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 6.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 6.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 SUPERFAMILY SSF53822 61 312 4.32E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 Gene3D G3DSA:1.10.260.40 1 60 1.3E-22 T 14-10-2018 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 SUPERFAMILY SSF47413 2 58 6.43E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.6E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 Pfam PF13377 Periplasmic binding protein-like domain 166 313 3.6E-14 T 14-10-2018 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 SMART SM00354 2 72 2.0E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 Gene3D G3DSA:3.40.50.2300 161 276 1.2E-59 T 14-10-2018 DDU33_09940 ea14e47eb07776cb7d8fbcce44a127ac 313 Gene3D G3DSA:3.40.50.2300 66 299 1.2E-59 T 14-10-2018 DDU33_02660 61d3b12465b343ef60f7af7d75ae4e18 211 SUPERFAMILY SSF52540 2 197 6.5E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02660 61d3b12465b343ef60f7af7d75ae4e18 211 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 177 3.2E-39 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DDU33_02660 61d3b12465b343ef60f7af7d75ae4e18 211 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 4 202 1.1E-121 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DDU33_02660 61d3b12465b343ef60f7af7d75ae4e18 211 Hamap MF_01389 Urease accessory protein UreG [ureG]. 3 201 46.786 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DDU33_02660 61d3b12465b343ef60f7af7d75ae4e18 211 PIRSF PIRSF005624 1 211 1.4E-54 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 DDU33_02660 61d3b12465b343ef60f7af7d75ae4e18 211 Gene3D G3DSA:3.40.50.300 4 201 3.5E-52 T 14-10-2018 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 SMART SM00471 225 364 0.0025 T 14-10-2018 IPR003607 HD/PDEase domain DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 Gene3D G3DSA:1.10.3090.10 123 411 9.1E-44 T 14-10-2018 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 412 52.074 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 Pfam PF01743 Poly A polymerase head domain 3 123 1.4E-20 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 1.5E-15 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 406 40.727 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 SUPERFAMILY SSF81891 121 365 5.62E-53 T 14-10-2018 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 Pfam PF01966 HD domain 231 314 9.6E-10 T 14-10-2018 IPR006674 HD domain DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 SUPERFAMILY SSF81301 1 120 3.6E-31 T 14-10-2018 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 PIRSF PIRSF000813 1 412 1.5E-194 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DDU33_09355 9c8908208bdd2186a39f5e64bc5d6bf9 412 Gene3D G3DSA:3.30.460.10 1 122 1.0E-28 T 14-10-2018 DDU33_04660 1098f737268c7ffda54a84c0082881ab 236 Gene3D G3DSA:1.10.8.60 170 236 2.7E-23 T 14-10-2018 DDU33_04660 1098f737268c7ffda54a84c0082881ab 236 Pfam PF00308 Bacterial dnaA protein 38 215 2.2E-19 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DDU33_04660 1098f737268c7ffda54a84c0082881ab 236 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 2 234 3.0E-75 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 DDU33_04660 1098f737268c7ffda54a84c0082881ab 236 Gene3D G3DSA:3.40.50.300 27 167 1.8E-29 T 14-10-2018 DDU33_04660 1098f737268c7ffda54a84c0082881ab 236 SUPERFAMILY SSF52540 12 214 8.76E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04660 1098f737268c7ffda54a84c0082881ab 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 39 59 1.0E-5 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDU33_04660 1098f737268c7ffda54a84c0082881ab 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 134 161 1.0E-5 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDU33_02445 baf4e6a86674858b7a8c73a66b5c6c36 104 Pfam PF02410 Ribosomal silencing factor during starvation 9 103 4.8E-26 T 14-10-2018 DDU33_02445 baf4e6a86674858b7a8c73a66b5c6c36 104 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 104 22.982 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DDU33_02445 baf4e6a86674858b7a8c73a66b5c6c36 104 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 6 103 1.1E-33 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DDU33_02445 baf4e6a86674858b7a8c73a66b5c6c36 104 SUPERFAMILY SSF81301 4 104 5.4E-33 T 14-10-2018 DDU33_02445 baf4e6a86674858b7a8c73a66b5c6c36 104 Gene3D G3DSA:3.30.460.10 2 104 3.5E-33 T 14-10-2018 DDU33_08525 00262089deb6712d4e80df334341451e 432 SUPERFAMILY SSF55205 1 428 1.3E-141 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DDU33_08525 00262089deb6712d4e80df334341451e 432 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 431 36.152 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDU33_08525 00262089deb6712d4e80df334341451e 432 Gene3D G3DSA:3.65.10.10 20 227 4.0E-155 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DDU33_08525 00262089deb6712d4e80df334341451e 432 PIRSF PIRSF000505 2 431 4.2E-155 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDU33_08525 00262089deb6712d4e80df334341451e 432 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDU33_08525 00262089deb6712d4e80df334341451e 432 Gene3D G3DSA:3.65.10.10 245 423 4.0E-155 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DDU33_08525 00262089deb6712d4e80df334341451e 432 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 428 1.4E-145 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDU33_08525 00262089deb6712d4e80df334341451e 432 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DDU33_08525 00262089deb6712d4e80df334341451e 432 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 425 1.8E-163 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DDU33_02675 075541c8586adf6cdb9eed4c4f8d30dd 205 SUPERFAMILY SSF47616 72 192 6.96E-10 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DDU33_02675 075541c8586adf6cdb9eed4c4f8d30dd 205 Gene3D G3DSA:3.40.30.10 3 81 7.1E-47 T 14-10-2018 DDU33_02675 075541c8586adf6cdb9eed4c4f8d30dd 205 Gene3D G3DSA:1.20.1050.10 82 192 7.1E-47 T 14-10-2018 DDU33_02675 075541c8586adf6cdb9eed4c4f8d30dd 205 SUPERFAMILY SSF52833 1 103 9.16E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_02675 075541c8586adf6cdb9eed4c4f8d30dd 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 80 1.3E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 SUPERFAMILY SSF56024 22 192 1.76E-22 T 14-10-2018 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 SMART SM00155 136 162 0.17 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 SMART SM00155 356 383 0.0057 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 PIRSF PIRSF000850 1 455 1.1E-205 T 14-10-2018 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 Gene3D G3DSA:3.30.870.10 24 235 2.0E-164 T 14-10-2018 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 Pfam PF13091 PLD-like domain 266 410 4.0E-19 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 Pfam PF13091 PLD-like domain 40 156 7.2E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 Gene3D G3DSA:3.30.870.10 20 451 2.0E-164 T 14-10-2018 DDU33_05225 f4b19d71d450d7646fa32fad028618cc 455 SUPERFAMILY SSF56024 259 397 4.71E-15 T 14-10-2018 DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 Gene3D G3DSA:3.30.70.100 992 1086 4.4E-20 T 14-10-2018 DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 SUPERFAMILY SSF82861 838 923 9.29E-8 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 SUPERFAMILY SSF82689 993 1092 4.05E-25 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 Pfam PF12795 Mechanosensitive ion channel porin domain 34 265 9.4E-35 T 14-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 954 988 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 Pfam PF00924 Mechanosensitive ion channel 882 1081 3.7E-55 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 SUPERFAMILY SSF50182 925 989 1.44E-16 T 14-10-2018 IPR010920 LSM domain superfamily DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 Gene3D G3DSA:2.30.30.60 940 989 3.8E-13 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DDU33_08730 f65b239f972130ca12a19ba0e991d54c 1110 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 486 821 4.6E-95 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DDU33_02850 af55ba5001f1f58193b966cc5a5c7139 204 Pfam PF01323 DSBA-like thioredoxin domain 7 179 3.9E-6 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DDU33_02850 af55ba5001f1f58193b966cc5a5c7139 204 SUPERFAMILY SSF52833 1 189 9.35E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_02850 af55ba5001f1f58193b966cc5a5c7139 204 Gene3D G3DSA:3.40.30.10 1 204 1.3E-39 T 14-10-2018 DDU33_08530 db0231d9b11d86cefa9e28eb6224b114 256 Gene3D G3DSA:3.40.1390.30 15 241 2.8E-80 T 14-10-2018 DDU33_08530 db0231d9b11d86cefa9e28eb6224b114 256 SUPERFAMILY SSF102705 4 255 1.7E-80 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DDU33_08530 db0231d9b11d86cefa9e28eb6224b114 256 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 244 1.2E-60 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DDU33_08530 db0231d9b11d86cefa9e28eb6224b114 256 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 255 4.6E-72 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DDU33_08530 db0231d9b11d86cefa9e28eb6224b114 256 Gene3D G3DSA:3.40.1390.30 98 227 2.8E-80 T 14-10-2018 DDU33_06200 7660dabf771410447502b514e6390fc9 442 Pfam PF03958 Bacterial type II/III secretion system short domain 118 183 2.6E-13 T 14-10-2018 IPR005644 NolW-like DDU33_06200 7660dabf771410447502b514e6390fc9 442 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 19 424 9.7E-112 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ DDU33_06200 7660dabf771410447502b514e6390fc9 442 Gene3D G3DSA:3.30.1370.130 23 81 1.4E-8 T 14-10-2018 DDU33_06200 7660dabf771410447502b514e6390fc9 442 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 4.7E-15 T 14-10-2018 IPR001775 GspD/PilQ family DDU33_06200 7660dabf771410447502b514e6390fc9 442 PRINTS PR00811 Bacterial general secretion pathway protein D signature 183 193 4.7E-15 T 14-10-2018 IPR001775 GspD/PilQ family DDU33_06200 7660dabf771410447502b514e6390fc9 442 PRINTS PR00811 Bacterial general secretion pathway protein D signature 258 282 4.7E-15 T 14-10-2018 IPR001775 GspD/PilQ family DDU33_06200 7660dabf771410447502b514e6390fc9 442 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 4.7E-15 T 14-10-2018 IPR001775 GspD/PilQ family DDU33_06200 7660dabf771410447502b514e6390fc9 442 Pfam PF00263 Bacterial type II and III secretion system protein 262 424 8.9E-44 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 DDU33_06200 7660dabf771410447502b514e6390fc9 442 PRINTS PR01032 Gene IV protein signature 404 426 9.3E-5 T 14-10-2018 DDU33_06200 7660dabf771410447502b514e6390fc9 442 PRINTS PR01032 Gene IV protein signature 242 265 9.3E-5 T 14-10-2018 DDU33_06200 7660dabf771410447502b514e6390fc9 442 PRINTS PR01032 Gene IV protein signature 351 379 9.3E-5 T 14-10-2018 DDU33_06200 7660dabf771410447502b514e6390fc9 442 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 369 402 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 DDU33_06200 7660dabf771410447502b514e6390fc9 442 Gene3D G3DSA:3.30.1370.120 82 184 1.5E-24 T 14-10-2018 IPR038591 NolW-like superfamily DDU33_09205 7f45235cc1b9c8584acd92d62ca9b065 500 PIRSF PIRSF009451 1 500 2.8E-267 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 DDU33_09205 7f45235cc1b9c8584acd92d62ca9b065 500 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 33 498 1.3E-267 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 DDU33_09205 7f45235cc1b9c8584acd92d62ca9b065 500 Gene3D G3DSA:3.40.1080.10 2 229 7.9E-97 T 14-10-2018 DDU33_09205 7f45235cc1b9c8584acd92d62ca9b065 500 SUPERFAMILY SSF100950 28 229 5.58E-75 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_09205 7f45235cc1b9c8584acd92d62ca9b065 500 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 23 499 4.0E-265 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 DDU33_09205 7f45235cc1b9c8584acd92d62ca9b065 500 Gene3D G3DSA:3.40.1080.10 231 500 7.4E-125 T 14-10-2018 DDU33_09205 7f45235cc1b9c8584acd92d62ca9b065 500 SUPERFAMILY SSF100950 232 498 1.45E-60 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 Gene3D G3DSA:3.30.950.10 116 236 4.3E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 Gene3D G3DSA:3.40.1010.10 1 115 2.1E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 8 279 5.3E-109 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 86 97 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 202 2.1E-22 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 SUPERFAMILY SSF53790 6 227 7.07E-81 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 8 229 36.895 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DDU33_00360 a29c57c9381b59e532a653bf2928df31 283 PIRSF PIRSF005917 1 282 2.2E-104 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 Gene3D G3DSA:3.30.420.40 3 242 2.6E-59 T 14-10-2018 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 PIRSF PIRSF000538 1 472 8.8E-81 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 SUPERFAMILY SSF53067 7 253 3.95E-59 T 14-10-2018 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 SUPERFAMILY SSF53067 256 470 6.12E-42 T 14-10-2018 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 442 6.6E-27 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 Gene3D G3DSA:3.30.420.40 243 472 2.1E-40 T 14-10-2018 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 3.3E-81 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 3 470 2.1E-214 T 14-10-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 Hamap MF_00986 L-fuculokinase [fucK]. 1 470 59.754 T 14-10-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 DDU33_03440 4a8b94f4a882ae45af1fa36496e6cbfd 472 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_03020 6000c0336aa3d9b62168232c672cacb6 120 Gene3D G3DSA:3.90.1150.30 2 120 2.0E-45 T 14-10-2018 IPR038056 YjbR-like superfamily DDU33_03020 6000c0336aa3d9b62168232c672cacb6 120 Pfam PF04237 YjbR 13 113 1.8E-19 T 14-10-2018 IPR007351 Uncharacterised protein YjbR DDU33_03020 6000c0336aa3d9b62168232c672cacb6 120 SUPERFAMILY SSF142906 2 118 8.63E-31 T 14-10-2018 IPR038056 YjbR-like superfamily DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 103 139 1.1E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 11 47 2.8E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 57 92 1.5E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 SUPERFAMILY SSF57783 52 97 7.4E-12 T 14-10-2018 DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 Gene3D G3DSA:3.30.65.10 49 100 1.0E-5 T 14-10-2018 DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 Gene3D G3DSA:3.30.65.10 5 48 1.0E-9 T 14-10-2018 DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 SUPERFAMILY SSF57783 97 136 8.67E-6 T 14-10-2018 DDU33_00010 37a0b86ccdf269da277f4596b83ae087 177 SUPERFAMILY SSF57783 9 48 2.38E-13 T 14-10-2018 DDU33_02135 408f76bbd75e71f461c3c9d94e631f6c 117 SUPERFAMILY SSF53137 3 115 5.01E-52 T 14-10-2018 DDU33_02135 408f76bbd75e71f461c3c9d94e631f6c 117 Gene3D G3DSA:3.30.420.100 1 117 5.0E-44 T 14-10-2018 DDU33_02135 408f76bbd75e71f461c3c9d94e631f6c 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.549 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02135 408f76bbd75e71f461c3c9d94e631f6c 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.9E-43 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02135 408f76bbd75e71f461c3c9d94e631f6c 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.2E-45 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02370 b89d397da93fd851fbaa9137ab778e43 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 1.0E-119 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DDU33_02370 b89d397da93fd851fbaa9137ab778e43 294 PIRSF PIRSF000401 1 294 3.8E-95 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DDU33_02370 b89d397da93fd851fbaa9137ab778e43 294 Gene3D G3DSA:3.40.50.150 101 293 9.4E-57 T 14-10-2018 DDU33_02370 b89d397da93fd851fbaa9137ab778e43 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 5.2E-105 T 14-10-2018 DDU33_02370 b89d397da93fd851fbaa9137ab778e43 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.949 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DDU33_02370 b89d397da93fd851fbaa9137ab778e43 294 SUPERFAMILY SSF53335 78 291 4.84E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_06805 3a796ca0f60699677a14247dbcc42979 305 Gene3D G3DSA:3.30.420.40 120 292 7.5E-85 T 14-10-2018 DDU33_06805 3a796ca0f60699677a14247dbcc42979 305 Pfam PF00480 ROK family 3 303 8.1E-90 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DDU33_06805 3a796ca0f60699677a14247dbcc42979 305 Gene3D G3DSA:3.30.420.40 5 299 7.5E-85 T 14-10-2018 DDU33_06805 3a796ca0f60699677a14247dbcc42979 305 SUPERFAMILY SSF53067 1 303 5.12E-56 T 14-10-2018 DDU33_06805 3a796ca0f60699677a14247dbcc42979 305 ProSitePatterns PS01125 ROK family signature. 131 158 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 SUPERFAMILY SSF52540 4 430 1.86E-181 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 Gene3D G3DSA:3.40.440.10 7 249 2.1E-103 T 14-10-2018 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 Gene3D G3DSA:3.90.170.10 267 432 4.3E-69 T 14-10-2018 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 7 430 5.6E-206 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 SMART SM00788 4 425 1.8E-300 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.993 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 5.1E-180 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DDU33_10355 d84732d974c2aa93836d08b98f96447d 432 Gene3D G3DSA:1.10.300.10 102 201 2.1E-103 T 14-10-2018 DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 SUPERFAMILY SSF52540 3 245 7.91E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 Gene3D G3DSA:3.40.50.300 1 277 5.6E-82 T 14-10-2018 DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 SMART SM00382 27 214 7.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 Pfam PF00005 ABC transporter 18 164 4.5E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 SUPERFAMILY SSF50331 239 341 2.26E-11 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 Pfam PF12857 TOBE-like domain 287 340 6.1E-13 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 DDU33_03930 96131b1f11b3963d708ec4a3894cbe74 356 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.1E-116 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 DDU33_02430 4b6a05970abe6884cf6758ea8f96969b 375 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 10 365 28.287 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_02430 4b6a05970abe6884cf6758ea8f96969b 375 Pfam PF01098 Cell cycle protein 19 361 3.0E-118 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_02430 4b6a05970abe6884cf6758ea8f96969b 375 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 320 344 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_02430 4b6a05970abe6884cf6758ea8f96969b 375 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 16 362 7.5E-135 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 SUPERFAMILY SSF51126 79 342 6.91E-64 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 SMART SM00912 89 209 4.5E-50 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF04829 Pre-toxin domain with VENN motif 3754 3804 4.9E-19 T 14-10-2018 IPR006914 VENN motif-containing domain DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF12639 DNase/tRNase domain of colicin-like bacteriocin 4012 4116 4.6E-21 T 14-10-2018 DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 6.3E-9 T 14-10-2018 IPR024973 ESPR domain DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF13332 Haemagluttinin repeat 3009 3167 7.0E-6 T 14-10-2018 IPR025157 Hemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF13332 Haemagluttinin repeat 3255 3418 2.0E-33 T 14-10-2018 IPR025157 Hemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05860 haemagglutination activity domain 75 208 7.5E-33 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 268 341 0.16 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 985 1045 6.2 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 1281 1314 0.01 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 2395 2427 2.3 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 1497 1565 0.035 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 1684 1730 0.049 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 1573 1632 0.034 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 808 864 1.2 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 1377 1440 41.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 1166 1234 0.021 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Pfam PF05594 Haemagluttinin repeat 552 603 5.9E-6 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 807 843 8.5E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1691 1731 0.47 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1569 1605 7.4E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 553 587 2.0E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 891 928 3.2E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1228 1263 0.014 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1607 1647 0.013 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1307 1346 1.3E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1527 1566 0.001 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1265 1306 5.2E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1084 1119 2.9E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1929 1967 0.73 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 588 628 1.7E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1016 1054 0.036 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 873 903 0.11 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1035 1075 0.11 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1436 1472 4.8E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1203 1243 0.014 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1649 1689 0.0074 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1813 1846 0.04 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1121 1155 7.4E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1827 1863 0.069 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1183 1220 0.013 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1473 1500 0.26 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1245 1280 4.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1453 1493 6.7E-8 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 766 799 0.085 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1143 1176 0.018 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 679 716 1.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1848 1890 0.13 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1395 1429 9.6E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2397 2427 0.046 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1733 1771 5.4E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 Gene3D G3DSA:2.160.20.10 76 378 2.5E-107 T 14-10-2018 IPR012334 Pectin lyase fold DDU33_00745 69f9b4270e5f51b1e51d94813f90011d 4124 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 204 1.6E-19 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1294 5.0E-101 T 14-10-2018 DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Gene3D G3DSA:3.90.650.10 421 607 2.6E-60 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SUPERFAMILY SSF109736 157 222 4.84E-21 T 14-10-2018 DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Gene3D G3DSA:3.90.650.10 810 983 5.7E-27 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SUPERFAMILY SSF52317 1039 1294 2.18E-93 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Gene3D G3DSA:1.10.8.750 155 215 2.3E-28 T 14-10-2018 DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 6 1296 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SUPERFAMILY SSF82697 3 153 5.23E-51 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SUPERFAMILY SSF55326 622 817 1.91E-66 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SUPERFAMILY SSF55326 223 429 3.17E-63 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Gene3D G3DSA:3.30.1330.10 216 420 2.3E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Gene3D G3DSA:3.40.50.880 984 1297 1.2E-132 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Gene3D G3DSA:3.30.1330.10 615 809 3.6E-24 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SUPERFAMILY SSF56042 433 616 1.64E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 839 965 6.4E-13 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 1.3E-27 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 3 1298 21.214 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SUPERFAMILY SSF56042 828 1035 3.89E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_03300 fdf3df0b1ec9dd54a08c5c59ca30f584 1298 SMART SM01211 1042 1297 2.9E-148 T 14-10-2018 DDU33_10480 e1ff7a2a3837e5c87124f35bbcd6afe3 102 SUPERFAMILY SSF102829 6 94 3.66E-19 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily DDU33_10480 e1ff7a2a3837e5c87124f35bbcd6afe3 102 Pfam PF05164 Cell division protein ZapA 6 87 3.4E-15 T 14-10-2018 IPR007838 Cell division protein ZapA-like DDU33_10480 e1ff7a2a3837e5c87124f35bbcd6afe3 102 Gene3D G3DSA:1.10.20.30 1 47 3.3E-15 T 14-10-2018 DDU33_07705 2eb1a4a6cceb4fef8fef3eeb0c374765 329 SUPERFAMILY SSF56349 56 325 2.53E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDU33_07705 2eb1a4a6cceb4fef8fef3eeb0c374765 329 Pfam PF00589 Phage integrase family 162 320 1.4E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDU33_07705 2eb1a4a6cceb4fef8fef3eeb0c374765 329 Gene3D G3DSA:1.10.150.130 52 163 1.2E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DDU33_07705 2eb1a4a6cceb4fef8fef3eeb0c374765 329 Gene3D G3DSA:1.10.443.10 164 329 2.6E-25 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 Gene3D G3DSA:3.40.50.300 1 139 5.6E-35 T 14-10-2018 DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 339 1.9E-23 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 338 1.6E-92 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 SUPERFAMILY SSF52540 1 208 2.9E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 Gene3D G3DSA:1.20.272.10 213 341 8.3E-34 T 14-10-2018 DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 Gene3D G3DSA:1.10.8.60 143 212 9.7E-20 T 14-10-2018 DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 Pfam PF06144 DNA polymerase III, delta subunit 21 189 1.3E-41 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DDU33_09675 7088559c17356f7b88b94c2ddb866426 341 SUPERFAMILY SSF48019 211 336 6.29E-25 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 8.3E-19 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 8.3E-19 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 158 184 8.3E-19 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 8.3E-19 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 Pfam PF00459 Inositol monophosphatase family 2 257 2.3E-68 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 Gene3D G3DSA:3.40.190.80 144 270 2.5E-33 T 14-10-2018 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 SUPERFAMILY SSF56655 1 264 2.75E-82 T 14-10-2018 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 Gene3D G3DSA:3.30.540.10 1 140 2.7E-52 T 14-10-2018 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 2.2E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 2.2E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 2.2E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 2.2E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 2.2E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_08910 b90b93eddd7267116ddf598c6210e161 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 2.2E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 SMART SM00382 187 377 0.0044 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 Pfam PF13538 UvrD-like helicase C-terminal domain 581 627 1.2E-15 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 650 44.189 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 SUPERFAMILY SSF52540 174 635 3.76E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 Gene3D G3DSA:3.40.50.300 132 383 1.1E-68 T 14-10-2018 DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 652 3.5E-169 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 Gene3D G3DSA:3.40.50.300 394 525 4.5E-17 T 14-10-2018 DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 Gene3D G3DSA:3.40.50.300 526 641 5.1E-23 T 14-10-2018 DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 Pfam PF13604 AAA domain 178 340 9.3E-30 T 14-10-2018 DDU33_10390 213aa724532bca1d1e05b62b436bbcf2 657 Gene3D G3DSA:1.10.10.1020 1 130 1.6E-7 T 14-10-2018 DDU33_04325 a6adfbbdd91ce5b71b0017857a2c1955 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.984 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_04325 a6adfbbdd91ce5b71b0017857a2c1955 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.3E-26 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_04325 a6adfbbdd91ce5b71b0017857a2c1955 78 Pfam PF00830 Ribosomal L28 family 3 62 9.4E-25 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04325 a6adfbbdd91ce5b71b0017857a2c1955 78 Gene3D G3DSA:2.30.170.40 2 78 5.1E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04325 a6adfbbdd91ce5b71b0017857a2c1955 78 SUPERFAMILY SSF143800 2 77 1.12E-29 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 Pfam PF00571 CBS domain 286 334 7.6E-5 T 14-10-2018 IPR000644 CBS domain DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 Gene3D G3DSA:3.30.465.10 348 429 3.5E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 SMART SM01091 347 427 5.1E-24 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 SUPERFAMILY SSF54631 202 337 5.48E-22 T 14-10-2018 DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 Gene3D G3DSA:3.10.580.10 195 347 2.1E-33 T 14-10-2018 DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 Pfam PF01595 Domain of unknown function DUF21 8 198 4.6E-38 T 14-10-2018 IPR002550 CNNM, transmembrane domain DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 Pfam PF03471 Transporter associated domain 348 425 5.4E-19 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_06165 097a0d0a39a1eb23207cf3f74499bd06 432 SUPERFAMILY SSF56176 345 428 3.27E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DDU33_03840 86ba2f580d1972a47caed3abbc13c34b 156 PIRSF PIRSF002122 2 156 7.6E-64 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DDU33_03840 86ba2f580d1972a47caed3abbc13c34b 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03840 86ba2f580d1972a47caed3abbc13c34b 156 SUPERFAMILY SSF47973 2 149 3.01E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DDU33_03840 86ba2f580d1972a47caed3abbc13c34b 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DDU33_03840 86ba2f580d1972a47caed3abbc13c34b 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.77 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DDU33_03840 86ba2f580d1972a47caed3abbc13c34b 156 Gene3D G3DSA:1.10.455.10 2 155 3.9E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DDU33_03840 86ba2f580d1972a47caed3abbc13c34b 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.8E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain DDU33_10455 f6977a4c3ef8813a122b69daec3ed9f9 463 Pfam PF00939 Sodium:sulfate symporter transmembrane region 19 462 2.7E-56 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_10455 f6977a4c3ef8813a122b69daec3ed9f9 463 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 412 428 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 DDU33_10455 f6977a4c3ef8813a122b69daec3ed9f9 463 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 37 462 8.2E-125 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 461 3.8E-248 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 4.6E-36 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 4.6E-36 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 4.6E-36 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 4.6E-36 T 14-10-2018 IPR000362 Fumarate lyase family DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 SUPERFAMILY SSF48557 3 460 7.85E-159 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 Gene3D G3DSA:1.10.40.30 408 462 3.2E-30 T 14-10-2018 DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 Pfam PF00206 Lyase 11 342 6.1E-113 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 Gene3D G3DSA:1.10.275.10 4 138 2.0E-55 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 Pfam PF10415 Fumarase C C-terminus 408 461 3.4E-26 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 Gene3D G3DSA:1.20.200.10 139 406 1.9E-116 T 14-10-2018 DDU33_02220 7a7dbd17caa3b1d017e7bb1c291adf16 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 462 92.526 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 PRINTS PR01021 OMPA domain signature 145 167 4.1E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 PRINTS PR01021 OMPA domain signature 190 206 4.1E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 PRINTS PR01021 OMPA domain signature 175 190 4.1E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 Gene3D G3DSA:3.30.1330.60 132 253 1.3E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 Gene3D G3DSA:3.30.1450.10 55 126 1.5E-6 T 14-10-2018 IPR037873 BamE-like DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 Pfam PF00691 OmpA family 144 235 1.7E-20 T 14-10-2018 IPR006665 OmpA-like domain DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 SUPERFAMILY SSF103088 136 249 2.35E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_07330 d6ab8fd7d8462e4e3c222607ecaf9db1 282 Pfam PF04355 SmpA / OmlA family 55 123 5.4E-18 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DDU33_00265 66f3e3104551a97006bd03efe1de5f3d 489 Pfam PF13175 AAA ATPase domain 37 403 5.3E-27 T 14-10-2018 DDU33_00265 66f3e3104551a97006bd03efe1de5f3d 489 Gene3D G3DSA:3.40.50.300 36 426 1.2E-15 T 14-10-2018 DDU33_00265 66f3e3104551a97006bd03efe1de5f3d 489 SUPERFAMILY SSF52540 38 436 4.31E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04065 143bd7392cb9ad2fce3c8bf98dd51ee2 146 Gene3D G3DSA:3.10.129.10 1 145 2.5E-49 T 14-10-2018 DDU33_04065 143bd7392cb9ad2fce3c8bf98dd51ee2 146 Pfam PF03061 Thioesterase superfamily 52 130 5.1E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDU33_04065 143bd7392cb9ad2fce3c8bf98dd51ee2 146 SUPERFAMILY SSF54637 5 136 1.69E-28 T 14-10-2018 IPR029069 HotDog domain superfamily DDU33_04065 143bd7392cb9ad2fce3c8bf98dd51ee2 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 136 9.1E-34 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 Gene3D G3DSA:3.90.1170.10 1 136 6.1E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 SUPERFAMILY SSF54686 3 133 2.62E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.5E-46 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.734 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 7.5E-58 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03570 0904550f3d10c8355b73d02b46168167 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_07890 dabef1ec6e87b230c7545692ad9f1214 150 Pfam PF10772 Protein of unknown function (DUF2597) 7 140 2.5E-61 T 14-10-2018 IPR019708 Bacteriophage HP1, Orf24 DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 Gene3D G3DSA:3.40.50.790 68 159 2.1E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 PIRSF PIRSF002155 1 227 2.7E-79 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 Gene3D G3DSA:3.30.190.20 21 225 2.1E-81 T 14-10-2018 DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.201 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.6E-53 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.1E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03415 13ca6fbf3a1fa768200e551d6b2c861d 229 SUPERFAMILY SSF56808 6 225 3.01E-83 T 14-10-2018 IPR023674 Ribosomal protein L1-like DDU33_08860 498adc2f03de6ec9e734f9c281782e4f 266 SUPERFAMILY SSF56235 2 251 7.72E-46 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_08860 498adc2f03de6ec9e734f9c281782e4f 266 Pfam PF13230 Glutamine amidotransferases class-II 1 258 3.0E-108 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 DDU33_08860 498adc2f03de6ec9e734f9c281782e4f 266 Gene3D G3DSA:3.60.20.10 1 256 3.4E-93 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_10565 dc4254867effd1863fb4fb2f40726254 229 PIRSF PIRSF006102 19 229 5.3E-77 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_10565 dc4254867effd1863fb4fb2f40726254 229 Pfam PF02508 Rnf-Nqr subunit, membrane protein 24 217 1.7E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_10565 dc4254867effd1863fb4fb2f40726254 229 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 18 228 27.977 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 DDU33_10565 dc4254867effd1863fb4fb2f40726254 229 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 24 226 6.4E-84 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 PIRSF PIRSF002401 1 376 1.7E-139 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 SUPERFAMILY SSF52540 151 343 8.56E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 3.7E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.4E-145 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 Pfam PF01018 GTP1/OBG 4 157 3.5E-57 T 14-10-2018 IPR006169 GTP1/OBG domain DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 Gene3D G3DSA:2.70.210.12 1 158 5.9E-62 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 SUPERFAMILY SSF82051 2 157 6.15E-56 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 Gene3D G3DSA:3.40.50.300 159 337 1.1E-52 T 14-10-2018 DDU33_05115 e9dfae0387c0fe2ee5e9dd477c26abf6 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.52 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DDU33_05045 7af1e28a5f95b0f191b95fd289588bc1 244 Pfam PF00005 ABC transporter 20 170 1.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_05045 7af1e28a5f95b0f191b95fd289588bc1 244 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_05045 7af1e28a5f95b0f191b95fd289588bc1 244 Gene3D G3DSA:3.40.50.300 1 242 2.7E-71 T 14-10-2018 DDU33_05045 7af1e28a5f95b0f191b95fd289588bc1 244 SMART SM00382 27 218 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_05045 7af1e28a5f95b0f191b95fd289588bc1 244 PIRSF PIRSF039085 1 244 6.4E-88 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDU33_05045 7af1e28a5f95b0f191b95fd289588bc1 244 SUPERFAMILY SSF52540 3 228 6.05E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:3.30.70.1430 552 640 6.9E-286 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:1.20.1640.10 503 994 6.9E-286 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 600 614 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 4.8E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:3.30.70.1320 136 326 6.9E-286 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Pfam PF00873 AcrB/AcrD/AcrF family 5 997 3.7E-230 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 SUPERFAMILY SSF82866 292 490 6.8E-42 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 SUPERFAMILY SSF82866 776 1000 2.35E-44 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 SUPERFAMILY SSF82693 43 135 1.05E-23 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:3.30.2090.10 688 779 6.9E-286 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 SUPERFAMILY SSF82714 184 265 6.41E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:3.30.70.1440 641 837 6.9E-286 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:3.30.2090.10 180 270 6.9E-286 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 SUPERFAMILY SSF82693 142 314 3.03E-12 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:3.30.70.1430 42 787 6.9E-286 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 SUPERFAMILY SSF82714 689 778 8.76E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 SUPERFAMILY SSF82693 551 639 2.67E-14 T 14-10-2018 DDU33_02970 6b275d1d597f0892bef14a328eb53c8f 1023 Gene3D G3DSA:1.20.1640.10 12 502 6.9E-286 T 14-10-2018 DDU33_07685 76d4294b4ba8fea052ad7ca83fd3c5b3 437 SUPERFAMILY SSF52980 262 370 6.97E-9 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDU33_07685 76d4294b4ba8fea052ad7ca83fd3c5b3 437 Pfam PF04471 Restriction endonuclease 262 365 1.6E-7 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 DDU33_01470 bce31fc0291173fa4acd728629fd742f 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.4E-64 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DDU33_01470 bce31fc0291173fa4acd728629fd742f 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.652 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DDU33_01470 bce31fc0291173fa4acd728629fd742f 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 7.4E-52 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DDU33_01470 bce31fc0291173fa4acd728629fd742f 144 SUPERFAMILY SSF69500 1 143 3.66E-54 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DDU33_01470 bce31fc0291173fa4acd728629fd742f 144 Gene3D G3DSA:3.50.80.10 1 144 6.0E-55 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DDU33_05930 718fb93a77b7f90a9ed284d9c28effd6 420 Pfam PF07670 Nucleoside recognition 99 195 1.0E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DDU33_05930 718fb93a77b7f90a9ed284d9c28effd6 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 5.0E-74 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DDU33_05930 718fb93a77b7f90a9ed284d9c28effd6 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 6.1E-25 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DDU33_05930 718fb93a77b7f90a9ed284d9c28effd6 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 1.2E-158 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 SUPERFAMILY SSF50249 3 123 4.28E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.938 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.1E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.0E-70 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.0E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.0E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.0E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.0E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.0E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.0E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 PIRSF PIRSF002133 1 124 2.9E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_03835 e75b6e05052f7d92c58a35e0c6a3a07f 124 Gene3D G3DSA:2.40.50.140 1 124 1.7E-63 T 14-10-2018 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 Pfam PF00209 Sodium:neurotransmitter symporter family 10 126 6.0E-47 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 Pfam PF00209 Sodium:neurotransmitter symporter family 129 493 2.3E-89 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 SUPERFAMILY SSF161070 10 493 4.71E-133 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-29 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 318 337 1.3E-29 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 264 284 1.3E-29 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-29 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_04450 2f08cad7e67b3a756b2f4a4d774d90fe 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 1.3E-29 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_06195 c442a720a27aaa4cc3043b373ed247ba 144 Gene3D G3DSA:1.10.940.10 1 144 6.8E-43 T 14-10-2018 IPR035926 NusB-like superfamily DDU33_06195 c442a720a27aaa4cc3043b373ed247ba 144 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 140 8.1E-41 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 DDU33_06195 c442a720a27aaa4cc3043b373ed247ba 144 Pfam PF01029 NusB family 7 138 7.9E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DDU33_06195 c442a720a27aaa4cc3043b373ed247ba 144 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 142 22.183 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 DDU33_06195 c442a720a27aaa4cc3043b373ed247ba 144 SUPERFAMILY SSF48013 4 140 1.57E-38 T 14-10-2018 IPR035926 NusB-like superfamily DDU33_02695 ddd8fa5c5753b3142006afef394bae44 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 3.1E-57 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02695 ddd8fa5c5753b3142006afef394bae44 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-45 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02695 ddd8fa5c5753b3142006afef394bae44 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.137 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02695 ddd8fa5c5753b3142006afef394bae44 100 Gene3D G3DSA:3.30.280.10 1 100 1.4E-46 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02695 ddd8fa5c5753b3142006afef394bae44 100 Pfam PF00547 Urease, gamma subunit 1 99 1.3E-46 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02695 ddd8fa5c5753b3142006afef394bae44 100 PIRSF PIRSF001223 1 100 2.4E-49 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02695 ddd8fa5c5753b3142006afef394bae44 100 SUPERFAMILY SSF54111 1 100 2.49E-45 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DDU33_02540 9abec1c196815f410f3ed943874f0a3f 440 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 371 9.6E-153 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDU33_02540 9abec1c196815f410f3ed943874f0a3f 440 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 439 4.5E-194 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDU33_02540 9abec1c196815f410f3ed943874f0a3f 440 PIRSF PIRSF004539 3 440 6.9E-183 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DDU33_02885 2a95989afbde4182fadc60f1b0b5ce5c 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 48 1.1E-9 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DDU33_02885 2a95989afbde4182fadc60f1b0b5ce5c 88 SUPERFAMILY SSF143120 1 54 2.88E-12 T 14-10-2018 IPR036165 YefM-like superfamily DDU33_02885 2a95989afbde4182fadc60f1b0b5ce5c 88 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 22 50 2.2E-9 T 14-10-2018 DDU33_02375 ae8a9061440519188cd68951e1578c72 253 SUPERFAMILY SSF53271 71 192 7.67E-10 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_02375 ae8a9061440519188cd68951e1578c72 253 Gene3D G3DSA:3.40.50.2020 41 217 3.2E-8 T 14-10-2018 DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 SUPERFAMILY SSF55021 2 75 4.93E-22 T 14-10-2018 DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 4.9E-65 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 5.7E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 9.0E-33 T 14-10-2018 DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 SUPERFAMILY SSF55021 80 160 4.43E-25 T 14-10-2018 DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 Pfam PF01842 ACT domain 4 68 5.7E-16 T 14-10-2018 IPR002912 ACT domain DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 Gene3D G3DSA:3.30.70.1150 80 157 4.4E-27 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DDU33_09045 4884466ac8d9cfa7a4abd5ee627230a0 163 Gene3D G3DSA:3.30.70.260 1 78 8.3E-34 T 14-10-2018 DDU33_04280 2043083faca2c552acad15cc02941798 327 SUPERFAMILY SSF48576 7 327 2.02E-99 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DDU33_04280 2043083faca2c552acad15cc02941798 327 Gene3D G3DSA:1.10.600.10 1 326 4.5E-115 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DDU33_04280 2043083faca2c552acad15cc02941798 327 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DDU33_04280 2043083faca2c552acad15cc02941798 327 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 207 219 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DDU33_04280 2043083faca2c552acad15cc02941798 327 Pfam PF00348 Polyprenyl synthetase 35 277 3.6E-73 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DDU33_10360 6940e3a63b65c36ea95a2beef333043a 295 Gene3D G3DSA:3.30.479.30 53 192 2.6E-20 T 14-10-2018 DDU33_10360 6940e3a63b65c36ea95a2beef333043a 295 PIRSF PIRSF005651 1 295 4.0E-93 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DDU33_10360 6940e3a63b65c36ea95a2beef333043a 295 TIGRFAM TIGR01932 hflC: HflC protein 159 291 1.1E-49 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DDU33_10360 6940e3a63b65c36ea95a2beef333043a 295 TIGRFAM TIGR01932 hflC: HflC protein 1 156 2.7E-55 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DDU33_10360 6940e3a63b65c36ea95a2beef333043a 295 SUPERFAMILY SSF117892 56 195 4.84E-27 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DDU33_10360 6940e3a63b65c36ea95a2beef333043a 295 SMART SM00244 18 190 1.3E-43 T 14-10-2018 IPR001107 Band 7 domain DDU33_10360 6940e3a63b65c36ea95a2beef333043a 295 Pfam PF01145 SPFH domain / Band 7 family 22 207 3.1E-34 T 14-10-2018 IPR001107 Band 7 domain DDU33_06795 4842e89f7067df68ee0b58082d921768 104 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 98 5.7E-37 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 DDU33_06795 4842e89f7067df68ee0b58082d921768 104 SMART SM01103 5 88 1.1E-42 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDU33_06795 4842e89f7067df68ee0b58082d921768 104 Gene3D G3DSA:3.30.110.60 3 103 1.2E-36 T 14-10-2018 IPR035920 YhbY-like superfamily DDU33_06795 4842e89f7067df68ee0b58082d921768 104 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 99 6.0E-40 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDU33_06795 4842e89f7067df68ee0b58082d921768 104 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 5.6E-22 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DDU33_06795 4842e89f7067df68ee0b58082d921768 104 SUPERFAMILY SSF75471 3 97 4.05E-32 T 14-10-2018 IPR035920 YhbY-like superfamily DDU33_03060 3f21e883061c79865d7ec35d1029d747 231 Gene3D G3DSA:3.40.630.30 15 231 5.7E-56 T 14-10-2018 DDU33_03060 3f21e883061c79865d7ec35d1029d747 231 SUPERFAMILY SSF55729 43 198 1.11E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_03060 3f21e883061c79865d7ec35d1029d747 231 Pfam PF13302 Acetyltransferase (GNAT) domain 43 173 1.6E-17 T 14-10-2018 IPR000182 GNAT domain DDU33_05810 3829ea61a553a042cd936bca98e136d2 288 Hamap MF_00188 Protease HtpX [htpX]. 2 288 25.672 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DDU33_05810 3829ea61a553a042cd936bca98e136d2 288 Pfam PF01435 Peptidase family M48 80 287 4.0E-43 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DDU33_05810 3829ea61a553a042cd936bca98e136d2 288 Gene3D G3DSA:3.30.2010.10 69 162 5.8E-35 T 14-10-2018 DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 7.3E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 7.3E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 7.3E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 Pfam PF00210 Ferritin-like domain 18 153 5.3E-23 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 PIRSF PIRSF005900 1 159 4.4E-45 T 14-10-2018 IPR002177 DNA-binding protein Dps DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 Gene3D G3DSA:1.20.1260.10 1 154 1.5E-51 T 14-10-2018 IPR012347 Ferritin-like DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DDU33_09745 65ae7ac17a441dd238fc1203bb55a80d 162 SUPERFAMILY SSF47240 2 153 1.08E-42 T 14-10-2018 IPR009078 Ferritin-like superfamily DDU33_01830 1b189c4e0be644d6e6b8d7c8700b373a 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01830 1b189c4e0be644d6e6b8d7c8700b373a 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 40 0.003 T 14-10-2018 DDU33_01830 1b189c4e0be644d6e6b8d7c8700b373a 41 SUPERFAMILY SSF57840 7 40 1.7E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01830 1b189c4e0be644d6e6b8d7c8700b373a 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 40 1.7E-9 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01830 1b189c4e0be644d6e6b8d7c8700b373a 41 Pfam PF00444 Ribosomal protein L36 2 40 9.8E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01830 1b189c4e0be644d6e6b8d7c8700b373a 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.034 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_09555 856a0801122e670f483caf9c0446cd2d 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 302 1.1E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_09555 856a0801122e670f483caf9c0446cd2d 344 Gene3D G3DSA:3.40.50.300 1 336 2.3E-68 T 14-10-2018 DDU33_09555 856a0801122e670f483caf9c0446cd2d 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 2.8E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_09555 856a0801122e670f483caf9c0446cd2d 344 SMART SM00382 32 242 2.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_09555 856a0801122e670f483caf9c0446cd2d 344 Pfam PF00005 ABC transporter 23 184 5.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_09555 856a0801122e670f483caf9c0446cd2d 344 SUPERFAMILY SSF52540 3 255 4.5E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05205 c9027b5f9f89ddddef3906c8c027668c 231 SUPERFAMILY SSF56300 2 226 3.48E-18 T 14-10-2018 DDU33_05205 c9027b5f9f89ddddef3906c8c027668c 231 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 198 4.4E-7 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DDU33_05205 c9027b5f9f89ddddef3906c8c027668c 231 PIRSF PIRSF036446 1 227 1.5E-117 T 14-10-2018 IPR017056 Phosphoesterase, HI0762, predicted DDU33_04075 5374fef86339beba86279ab1e23be74a 360 Gene3D G3DSA:3.30.1330.60 218 360 1.2E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_04075 5374fef86339beba86279ab1e23be74a 360 SUPERFAMILY SSF103088 231 352 1.07E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_04075 5374fef86339beba86279ab1e23be74a 360 Pfam PF00691 OmpA family 240 333 1.2E-19 T 14-10-2018 IPR006665 OmpA-like domain DDU33_04075 5374fef86339beba86279ab1e23be74a 360 SUPERFAMILY SSF56925 20 221 1.02E-35 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_04075 5374fef86339beba86279ab1e23be74a 360 Gene3D G3DSA:2.40.160.20 20 217 5.9E-50 T 14-10-2018 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 PRINTS PR01022 Outer membrane protein A signature 297 316 8.4E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 PRINTS PR01022 Outer membrane protein A signature 115 131 8.4E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 PRINTS PR01022 Outer membrane protein A signature 229 244 8.4E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 PRINTS PR01022 Outer membrane protein A signature 331 344 8.4E-11 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 Pfam PF01389 OmpA-like transmembrane domain 21 219 2.9E-71 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 PRINTS PR01021 OMPA domain signature 288 304 2.9E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 PRINTS PR01021 OMPA domain signature 241 263 2.9E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_04075 5374fef86339beba86279ab1e23be74a 360 PRINTS PR01021 OMPA domain signature 273 288 2.9E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 SUPERFAMILY SSF54211 79 159 2.15E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 SUPERFAMILY SSF54768 9 75 6.07E-24 T 14-10-2018 DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.2E-71 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.924 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 6.8E-31 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 2.7E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 Gene3D G3DSA:3.30.160.20 1 73 5.7E-34 T 14-10-2018 DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DDU33_02130 7e8833e0d7c03d23d5b49f3c9ed66403 166 Gene3D G3DSA:3.30.230.10 74 166 8.0E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_05505 9618a5b5402ba2612f994961e2ca5298 140 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 117 1.2E-31 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DDU33_05505 9618a5b5402ba2612f994961e2ca5298 140 SUPERFAMILY SSF55620 1 139 9.45E-37 T 14-10-2018 DDU33_05505 9618a5b5402ba2612f994961e2ca5298 140 Gene3D G3DSA:3.30.479.10 3 140 7.9E-35 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DDU33_05505 9618a5b5402ba2612f994961e2ca5298 140 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 139 1.2E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DDU33_05505 9618a5b5402ba2612f994961e2ca5298 140 PIRSF PIRSF006113 1 140 1.4E-24 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DDU33_05625 8931ef8ded4fa6ed12e3fcd4f9f07978 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 299 34.064 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DDU33_05625 8931ef8ded4fa6ed12e3fcd4f9f07978 302 Pfam PF04381 Putative exonuclease, RdgC 1 296 2.3E-113 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DDU33_07960 e73ae61d0e62a23489f9f3510d7bc945 533 SUPERFAMILY SSF69255 254 346 1.02E-11 T 14-10-2018 DDU33_07960 e73ae61d0e62a23489f9f3510d7bc945 533 SUPERFAMILY SSF69349 338 501 7.85E-9 T 14-10-2018 DDU33_07680 b744c1cb2365bb2f66f50b1f200f19c5 81 SUPERFAMILY SSF47598 2 42 3.81E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDU33_07680 b744c1cb2365bb2f66f50b1f200f19c5 81 Pfam PF12651 Ribbon-helix-helix domain 4 40 4.5E-7 T 14-10-2018 IPR038733 Predicted DNA-binding protein, ribbon-helix-helix domain DDU33_09825 9e2e8c9d42c73c6677ebe0044c74fcf5 360 SMART SM01329 5 354 3.3E-203 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDU33_09825 9e2e8c9d42c73c6677ebe0044c74fcf5 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 358 51.286 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DDU33_09825 9e2e8c9d42c73c6677ebe0044c74fcf5 360 Gene3D G3DSA:3.40.718.10 1 360 3.3E-158 T 14-10-2018 DDU33_09825 9e2e8c9d42c73c6677ebe0044c74fcf5 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 4.3E-138 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DDU33_09825 9e2e8c9d42c73c6677ebe0044c74fcf5 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DDU33_09825 9e2e8c9d42c73c6677ebe0044c74fcf5 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 353 5.5E-173 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DDU33_09825 9e2e8c9d42c73c6677ebe0044c74fcf5 360 SUPERFAMILY SSF53659 2 358 8.82E-125 T 14-10-2018 DDU33_06870 f8d40eba3df843cf7f3718507855946d 254 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 1.0E-42 T 14-10-2018 DDU33_06870 f8d40eba3df843cf7f3718507855946d 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 245 9.7E-64 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DDU33_06870 f8d40eba3df843cf7f3718507855946d 254 Gene3D G3DSA:3.40.190.10 105 216 6.2E-72 T 14-10-2018 DDU33_06870 f8d40eba3df843cf7f3718507855946d 254 Gene3D G3DSA:3.40.190.10 27 250 6.2E-72 T 14-10-2018 DDU33_06870 f8d40eba3df843cf7f3718507855946d 254 SUPERFAMILY SSF53850 24 252 3.22E-60 T 14-10-2018 DDU33_06870 f8d40eba3df843cf7f3718507855946d 254 PIRSF PIRSF004846 1 254 5.6E-67 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DDU33_05860 754fd52c7c61c645f72930d351f74953 707 SUPERFAMILY SSF56935 29 707 4.19E-104 T 14-10-2018 DDU33_05860 754fd52c7c61c645f72930d351f74953 707 Gene3D G3DSA:2.170.130.10 43 160 1.9E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_05860 754fd52c7c61c645f72930d351f74953 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 152 1.6E-8 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_05860 754fd52c7c61c645f72930d351f74953 707 Gene3D G3DSA:2.40.170.20 166 707 2.3E-105 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DDU33_05860 754fd52c7c61c645f72930d351f74953 707 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 690 707 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site DDU33_05860 754fd52c7c61c645f72930d351f74953 707 Pfam PF00593 TonB dependent receptor 228 706 4.6E-42 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DDU33_05860 754fd52c7c61c645f72930d351f74953 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 707 2.0E-70 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DDU33_01840 7e7cea0971bc0bb6b5f45c7ee3df945c 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 35 49 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDU33_01840 7e7cea0971bc0bb6b5f45c7ee3df945c 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 218 3.4E-96 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDU33_01840 7e7cea0971bc0bb6b5f45c7ee3df945c 224 PIRSF PIRSF001461 2 224 5.1E-102 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDU33_01840 7e7cea0971bc0bb6b5f45c7ee3df945c 224 SUPERFAMILY SSF51366 5 220 2.64E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_01840 7e7cea0971bc0bb6b5f45c7ee3df945c 224 Gene3D G3DSA:3.20.20.70 7 223 1.0E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_01840 7e7cea0971bc0bb6b5f45c7ee3df945c 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 8 205 2.5E-89 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 SUPERFAMILY SSF103515 215 492 3.27E-35 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 Pfam PF03212 Pertactin 16 130 1.7E-26 T 14-10-2018 IPR004899 Pertactin, central region DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 Pfam PF03797 Autotransporter beta-domain 246 470 4.8E-36 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 Gene3D G3DSA:2.160.20.20 1 133 3.1E-43 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 32 492 1.8E-69 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 SMART SM00869 243 481 8.7E-30 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 SUPERFAMILY SSF51126 2 131 2.07E-26 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DDU33_01685 db1ce0e8c1582b79678735d4560b0f21 492 Gene3D G3DSA:2.40.128.130 201 492 4.8E-55 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 Gene3D G3DSA:3.40.50.1370 5 330 2.5E-137 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 Gene3D G3DSA:3.40.50.1370 151 320 2.5E-137 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 3.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 3.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 4.8E-137 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 SUPERFAMILY SSF53671 4 333 1.18E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 80.968 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 8.7E-47 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 331 1.4E-53 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DDU33_04570 08d71f70eda3f719eeaad923951f82f2 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DDU33_02335 7ee001cb299b7fba8f68c706487fd2e1 286 SUPERFAMILY SSF51658 2 279 1.18E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DDU33_02335 7ee001cb299b7fba8f68c706487fd2e1 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 2.1E-35 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDU33_02335 7ee001cb299b7fba8f68c706487fd2e1 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 284 9.4E-150 T 14-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 DDU33_02335 7ee001cb299b7fba8f68c706487fd2e1 286 Gene3D G3DSA:3.20.20.150 1 284 1.0E-76 T 14-10-2018 DDU33_02035 16763a55309118d242577837dbf65fdf 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 238 2.2E-111 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDU33_02035 16763a55309118d242577837dbf65fdf 251 Gene3D G3DSA:3.40.1280.10 1 169 1.8E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DDU33_02035 16763a55309118d242577837dbf65fdf 251 SUPERFAMILY SSF75217 1 248 2.22E-100 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DDU33_02035 16763a55309118d242577837dbf65fdf 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 116.328 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDU33_02035 16763a55309118d242577837dbf65fdf 251 Gene3D G3DSA:1.10.1270.20 170 251 6.1E-34 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDU33_02035 16763a55309118d242577837dbf65fdf 251 PIRSF PIRSF000386 1 251 1.4E-101 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDU33_02035 16763a55309118d242577837dbf65fdf 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 6.3E-69 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DDU33_10345 7e7c0e199be0d66f44d5c4b91895cd54 473 SUPERFAMILY SSF117892 69 184 3.14E-14 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DDU33_10345 7e7c0e199be0d66f44d5c4b91895cd54 473 Pfam PF01145 SPFH domain / Band 7 family 26 210 2.0E-12 T 14-10-2018 IPR001107 Band 7 domain DDU33_10345 7e7c0e199be0d66f44d5c4b91895cd54 473 SMART SM00244 22 192 0.0011 T 14-10-2018 IPR001107 Band 7 domain DDU33_10345 7e7c0e199be0d66f44d5c4b91895cd54 473 Gene3D G3DSA:3.30.479.30 66 189 3.4E-11 T 14-10-2018 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 6.8E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 6.8E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 6.8E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 6.8E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 Gene3D G3DSA:1.10.287.80 6 284 7.6E-110 T 14-10-2018 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.443 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 Pfam PF00231 ATP synthase 5 287 2.1E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 SUPERFAMILY SSF52943 2 288 5.69E-96 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 Gene3D G3DSA:3.40.1380.10 61 207 7.6E-110 T 14-10-2018 DDU33_03205 c490d32c15177627ec9f3798b13e78ad 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.7E-110 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_01345 3de8f5f9bdc0157fa9e6d4353f85e172 321 SUPERFAMILY SSF53448 4 269 4.0E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01345 3de8f5f9bdc0157fa9e6d4353f85e172 321 Pfam PF00535 Glycosyl transferase family 2 9 171 2.3E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_01345 3de8f5f9bdc0157fa9e6d4353f85e172 321 Gene3D G3DSA:3.90.550.10 2 240 1.5E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 Pfam PF01336 OB-fold nucleic acid binding domain 21 100 1.3E-9 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 Gene3D G3DSA:2.40.50.140 2 105 2.1E-19 T 14-10-2018 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 461 6.0E-82 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 SUPERFAMILY SSF50249 16 103 4.29E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 6 467 6.8E-211 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 7 467 46.859 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 422 436 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 225 238 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 221 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 PRINTS PR01042 Aspartyl-tRNA synthetase signature 382 398 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 Gene3D G3DSA:3.30.930.10 110 466 1.3E-110 T 14-10-2018 DDU33_08630 cb1b90525814c4d95e9d5b5be058b0a6 467 SUPERFAMILY SSF55681 100 465 2.07E-97 T 14-10-2018 DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 Gene3D G3DSA:3.40.50.1980 129 297 7.0E-42 T 14-10-2018 DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 213 231 4.0E-8 T 14-10-2018 DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 189 204 4.0E-8 T 14-10-2018 DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 277 290 4.0E-8 T 14-10-2018 DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 4.0E-8 T 14-10-2018 DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 Pfam PF01497 Periplasmic binding protein 39 227 1.1E-7 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 SUPERFAMILY SSF53807 39 296 2.47E-31 T 14-10-2018 DDU33_05160 06a868dc805dee5a84cc062c0b130ad7 302 Gene3D G3DSA:3.40.50.1980 32 128 8.1E-8 T 14-10-2018 DDU33_01655 57cdb28c9974d06f83e0c11c95f34488 205 Gene3D G3DSA:1.20.1050.10 82 193 9.2E-44 T 14-10-2018 DDU33_01655 57cdb28c9974d06f83e0c11c95f34488 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 193 1.4E-4 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal DDU33_01655 57cdb28c9974d06f83e0c11c95f34488 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 5.0E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDU33_01655 57cdb28c9974d06f83e0c11c95f34488 205 SUPERFAMILY SSF52833 1 87 8.24E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_01655 57cdb28c9974d06f83e0c11c95f34488 205 SUPERFAMILY SSF47616 80 203 3.27E-13 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DDU33_01655 57cdb28c9974d06f83e0c11c95f34488 205 Gene3D G3DSA:3.40.30.10 3 81 9.2E-44 T 14-10-2018 DDU33_05535 655b30b6d6646aedc596d539d7320dfc 207 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 194 6.0E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_05535 655b30b6d6646aedc596d539d7320dfc 207 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 206 36.497 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 DDU33_05535 655b30b6d6646aedc596d539d7320dfc 207 PIRSF PIRSF006102 2 207 6.3E-70 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_05535 655b30b6d6646aedc596d539d7320dfc 207 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 206 4.1E-105 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 DDU33_08195 01ed571c4030d1fb6a0d8cc8ddb409d3 177 Gene3D G3DSA:1.10.60.30 106 177 6.9E-26 T 14-10-2018 DDU33_08195 01ed571c4030d1fb6a0d8cc8ddb409d3 177 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 11 175 23.636 T 14-10-2018 IPR006839 Ribosome-associated, YjgA DDU33_08195 01ed571c4030d1fb6a0d8cc8ddb409d3 177 Gene3D G3DSA:1.10.60.30 31 105 1.1E-23 T 14-10-2018 DDU33_08195 01ed571c4030d1fb6a0d8cc8ddb409d3 177 SUPERFAMILY SSF158710 32 173 6.41E-50 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily DDU33_08195 01ed571c4030d1fb6a0d8cc8ddb409d3 177 Pfam PF04751 Protein of unknown function (DUF615) 21 171 1.4E-56 T 14-10-2018 IPR006839 Ribosome-associated, YjgA DDU33_08195 01ed571c4030d1fb6a0d8cc8ddb409d3 177 PIRSF PIRSF016183 3 177 1.1E-70 T 14-10-2018 IPR006839 Ribosome-associated, YjgA DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 SMART SM00760 354 423 5.3E-46 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 174 188 1.6E-41 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 142 162 1.6E-41 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 208 222 1.6E-41 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 404 423 1.6E-41 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 269 1.6E-41 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Gene3D G3DSA:3.30.300.180 2 99 1.5E-19 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Gene3D G3DSA:1.10.8.60 277 347 3.2E-19 T 14-10-2018 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 SUPERFAMILY SSF48295 343 445 1.44E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 SUPERFAMILY SSF52540 110 322 5.69E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Pfam PF11638 DnaA N-terminal domain 3 61 1.6E-13 T 14-10-2018 IPR024633 DnaA N-terminal domain DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 ProSitePatterns PS01008 DnaA protein signature. 404 423 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 SMART SM00382 141 274 3.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 445 30.047 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Gene3D G3DSA:1.10.1750.10 353 446 8.6E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 355 423 2.4E-33 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Gene3D G3DSA:3.40.50.300 107 276 4.0E-44 T 14-10-2018 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 444 6.3E-155 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DDU33_04800 781adc0d171a4caf526f1a093f14517e 446 Pfam PF00308 Bacterial dnaA protein 110 328 7.9E-78 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 SUPERFAMILY SSF51621 4 345 1.14E-86 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 SUPERFAMILY SSF52935 329 478 1.3E-38 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 Gene3D G3DSA:3.40.1380.20 342 474 2.8E-154 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.8E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.8E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.8E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.8E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.8E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.8E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.8E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 476 2.3E-30 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 Gene3D G3DSA:3.20.20.60 6 341 2.8E-154 T 14-10-2018 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 3.6E-131 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 SUPERFAMILY SSF50800 74 169 8.72E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 1.5E-168 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_05370 f04569cc58eb8eb54605fccb197a6838 479 Gene3D G3DSA:2.40.33.10 74 172 2.8E-154 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DDU33_04545 6f6fc777f8da5974de0f78cb59f36d2f 151 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 1 151 8.0E-28 T 14-10-2018 IPR009328 Protein of unknown function DUF986 DDU33_04545 6f6fc777f8da5974de0f78cb59f36d2f 151 PIRSF PIRSF020687 1 151 7.4E-53 T 14-10-2018 IPR009328 Protein of unknown function DUF986 DDU33_04545 6f6fc777f8da5974de0f78cb59f36d2f 151 Pfam PF06173 Protein of unknown function (DUF986) 2 150 4.1E-56 T 14-10-2018 IPR009328 Protein of unknown function DUF986 DDU33_04545 6f6fc777f8da5974de0f78cb59f36d2f 151 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 151 22.729 T 14-10-2018 IPR009328 Protein of unknown function DUF986 DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 Gene3D G3DSA:3.40.50.1100 83 392 3.4E-139 T 14-10-2018 DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 Gene3D G3DSA:3.90.1380.10 1 79 6.1E-30 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 SUPERFAMILY SSF53686 1 423 3.27E-132 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 367 6.4E-25 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 Pfam PF14821 Threonine synthase N terminus 10 78 3.8E-9 T 14-10-2018 IPR029144 Threonine synthase, N-terminal DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 TIGRFAM TIGR00260 thrC: threonine synthase 50 396 2.6E-124 T 14-10-2018 IPR004450 Threonine synthase-like DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 Gene3D G3DSA:3.40.50.1100 101 399 3.4E-139 T 14-10-2018 DDU33_01145 119eb1dfa0e9be0c9b50698443b1de08 424 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 Hamap MF_00318 Enolase [eno]. 2 417 43.892 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 PIRSF PIRSF001400 1 430 3.8E-191 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 4.7E-136 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 PRINTS PR00148 Enolase signature 317 328 2.6E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 PRINTS PR00148 Enolase signature 340 354 2.6E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 PRINTS PR00148 Enolase signature 107 123 2.6E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 PRINTS PR00148 Enolase signature 37 51 2.6E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 PRINTS PR00148 Enolase signature 369 386 2.6E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 PRINTS PR00148 Enolase signature 165 178 2.6E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 SUPERFAMILY SSF54826 3 138 5.89E-56 T 14-10-2018 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 8.3E-209 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 SMART SM01193 4 134 1.1E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 Gene3D G3DSA:3.20.20.120 128 435 7.0E-131 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 Gene3D G3DSA:3.30.390.10 3 127 5.9E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 SUPERFAMILY SSF51604 144 426 1.98E-124 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 SMART SM01192 143 434 8.1E-211 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_06425 05078fedac598182bd33b4e15404aa8a 436 Pfam PF03952 Enolase, N-terminal domain 4 134 3.0E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DDU33_03045 a6fad7ab0d5202888604bf59ea4c220d 263 SUPERFAMILY SSF51621 6 261 3.49E-75 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DDU33_03045 a6fad7ab0d5202888604bf59ea4c220d 263 Gene3D G3DSA:3.20.20.60 2 262 7.7E-83 T 14-10-2018 DDU33_03045 a6fad7ab0d5202888604bf59ea4c220d 263 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 28 249 2.6E-45 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DDU33_04990 1f419e842ac917e9d325ba1723185a26 350 Gene3D G3DSA:3.40.1750.20 204 268 2.0E-44 T 14-10-2018 DDU33_04990 1f419e842ac917e9d325ba1723185a26 350 Pfam PF08496 Peptidase family S49 N-terminal 4 160 2.9E-54 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 DDU33_04990 1f419e842ac917e9d325ba1723185a26 350 SUPERFAMILY SSF52096 103 301 9.33E-33 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_04990 1f419e842ac917e9d325ba1723185a26 350 Pfam PF01343 Peptidase family S49 163 311 3.6E-50 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DDU33_04990 1f419e842ac917e9d325ba1723185a26 350 Gene3D G3DSA:3.90.226.10 130 303 2.0E-44 T 14-10-2018 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 Pfam PF02779 Transketolase, pyrimidine binding domain 354 526 4.1E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDU33_06650 7f059620cbf760af4201c360b82b733f 668 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 Gene3D G3DSA:3.40.50.970 2 326 6.7E-134 T 14-10-2018 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 SMART SM00861 355 527 5.9E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DDU33_06650 7f059620cbf760af4201c360b82b733f 668 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 SUPERFAMILY SSF52518 337 528 1.77E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_06650 7f059620cbf760af4201c360b82b733f 668 Pfam PF02780 Transketolase, C-terminal domain 555 660 2.7E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DDU33_06650 7f059620cbf760af4201c360b82b733f 668 SUPERFAMILY SSF52922 535 668 6.81E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 TIGRFAM TIGR00232 tktlase_bact: transketolase 7 667 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 SUPERFAMILY SSF52518 5 321 7.86E-122 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DDU33_06650 7f059620cbf760af4201c360b82b733f 668 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 334 5.9E-170 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 Gene3D G3DSA:3.40.50.920 541 668 3.6E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DDU33_06650 7f059620cbf760af4201c360b82b733f 668 Gene3D G3DSA:3.40.50.970 327 539 7.1E-82 T 14-10-2018 DDU33_03560 37d2575814f74bfdd8682474d73889d6 110 SUPERFAMILY SSF54843 1 109 3.14E-43 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_03560 37d2575814f74bfdd8682474d73889d6 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.1E-39 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DDU33_03560 37d2575814f74bfdd8682474d73889d6 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.244 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03560 37d2575814f74bfdd8682474d73889d6 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03560 37d2575814f74bfdd8682474d73889d6 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 3.5E-50 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_03560 37d2575814f74bfdd8682474d73889d6 110 Gene3D G3DSA:3.90.470.10 1 110 2.1E-47 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 Pfam PF00575 S1 RNA binding domain 36 118 6.9E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 Gene3D G3DSA:2.40.50.140 31 125 6.4E-33 T 14-10-2018 DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 SMART SM00316 37 119 4.0E-12 T 14-10-2018 IPR022967 RNA-binding domain, S1 DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 8.7E-172 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 Pfam PF10150 Ribonuclease E/G family 121 390 1.9E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 Hamap MF_00970 Ribonuclease E [rne]. 1 958 34.011 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 935 968 4.6E-14 T 14-10-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 SUPERFAMILY SSF50249 40 124 1.44E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_05235 94eb2b5481e93db5fc4c0b007e6197a1 970 Gene3D G3DSA:3.40.1260.20 400 508 1.8E-39 T 14-10-2018 DDU33_02750 c591b24ba68fbda9609f5267bc63f99c 99 Pfam PF03795 YCII-related domain 10 85 1.1E-6 T 14-10-2018 IPR005545 YCII-related DDU33_02750 c591b24ba68fbda9609f5267bc63f99c 99 Gene3D G3DSA:3.30.70.1060 2 88 1.1E-5 T 14-10-2018 DDU33_02750 c591b24ba68fbda9609f5267bc63f99c 99 SUPERFAMILY SSF54909 3 87 4.29E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DDU33_01690 720ae7e328bf3018de1659234b749339 291 SUPERFAMILY SSF51735 8 166 3.83E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_01690 720ae7e328bf3018de1659234b749339 291 Gene3D G3DSA:3.40.50.720 3 163 1.4E-48 T 14-10-2018 DDU33_01690 720ae7e328bf3018de1659234b749339 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 287 2.4E-23 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DDU33_01690 720ae7e328bf3018de1659234b749339 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 164 7.3E-42 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DDU33_01690 720ae7e328bf3018de1659234b749339 291 Gene3D G3DSA:1.10.1040.10 164 291 1.8E-27 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDU33_01690 720ae7e328bf3018de1659234b749339 291 PIRSF PIRSF000103 1 291 2.1E-79 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DDU33_01690 720ae7e328bf3018de1659234b749339 291 SUPERFAMILY SSF48179 165 289 8.5E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_03120 a5df90c3424ac3e35aad3c718d870ee4 400 Pfam PF05159 Capsule polysaccharide biosynthesis protein 85 394 3.2E-109 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 DDU33_08290 012037598ab940607a3c5856bc2bf053 215 SUPERFAMILY SSF56784 1 213 4.2E-55 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_08290 012037598ab940607a3c5856bc2bf053 215 Gene3D G3DSA:1.10.150.240 15 85 3.1E-51 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DDU33_08290 012037598ab940607a3c5856bc2bf053 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 6.1E-33 T 14-10-2018 DDU33_08290 012037598ab940607a3c5856bc2bf053 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 185 2.8E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_08290 012037598ab940607a3c5856bc2bf053 215 Gene3D G3DSA:3.40.50.1000 5 196 3.1E-51 T 14-10-2018 IPR023214 HAD superfamily DDU33_08290 012037598ab940607a3c5856bc2bf053 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_08290 012037598ab940607a3c5856bc2bf053 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_08290 012037598ab940607a3c5856bc2bf053 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 7.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_08290 012037598ab940607a3c5856bc2bf053 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DDU33_05430 cba960292d30e0c90a3475cb648d8d71 157 Pfam PF04073 Aminoacyl-tRNA editing domain 31 147 7.3E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DDU33_05430 cba960292d30e0c90a3475cb648d8d71 157 SUPERFAMILY SSF55826 2 155 4.97E-44 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DDU33_05430 cba960292d30e0c90a3475cb648d8d71 157 Gene3D G3DSA:3.90.960.10 1 157 1.5E-60 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DDU33_05430 cba960292d30e0c90a3475cb648d8d71 157 PIRSF PIRSF006181 1 157 3.0E-56 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DDU33_05430 cba960292d30e0c90a3475cb648d8d71 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 155 9.7E-56 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 Gene3D G3DSA:3.40.50.10490 249 609 2.6E-148 T 14-10-2018 DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 Gene3D G3DSA:3.40.50.10490 448 595 2.6E-148 T 14-10-2018 DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 Gene3D G3DSA:3.60.20.10 2 241 7.2E-83 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 SUPERFAMILY SSF53697 245 610 1.21E-112 T 14-10-2018 DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 Pfam PF01380 SIS domain 463 592 8.6E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 Pfam PF01380 SIS domain 290 418 5.7E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 Pfam PF13522 Glutamine amidotransferase domain 67 184 2.2E-23 T 14-10-2018 DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 SUPERFAMILY SSF56235 2 234 9.44E-77 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 41.015 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DDU33_03620 3ca721c68cfdf2a727baf855dfa0c66d 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.8E-264 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DDU33_07310 b921fd5d8ae315763518e16fb665ee3a 262 Gene3D G3DSA:3.40.50.300 6 251 4.4E-52 T 14-10-2018 DDU33_07310 b921fd5d8ae315763518e16fb665ee3a 262 SUPERFAMILY SSF52540 10 230 1.14E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07310 b921fd5d8ae315763518e16fb665ee3a 262 SMART SM00382 41 211 5.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_07310 b921fd5d8ae315763518e16fb665ee3a 262 Pfam PF00005 ABC transporter 32 160 7.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_07310 b921fd5d8ae315763518e16fb665ee3a 262 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_10655 aa981f5c2af709719f4f94835c1c176a 148 Pfam PF01475 Ferric uptake regulator family 12 133 1.3E-45 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DDU33_10655 aa981f5c2af709719f4f94835c1c176a 148 Gene3D G3DSA:1.10.10.10 2 86 6.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_10655 aa981f5c2af709719f4f94835c1c176a 148 Gene3D G3DSA:3.30.1490.190 88 146 1.3E-20 T 14-10-2018 DDU33_10655 aa981f5c2af709719f4f94835c1c176a 148 SUPERFAMILY SSF46785 4 138 1.12E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_04085 3efa806ea009fc62f266cbf11b2b6b1e 148 Pfam PF06303 MatP N-terminal domain 2 85 2.0E-38 T 14-10-2018 IPR035087 MatP, N-terminal DDU33_04085 3efa806ea009fc62f266cbf11b2b6b1e 148 Gene3D G3DSA:1.20.1270.380 1 89 1.1E-33 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily DDU33_04085 3efa806ea009fc62f266cbf11b2b6b1e 148 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.9E-24 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain DDU33_04085 3efa806ea009fc62f266cbf11b2b6b1e 148 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 5.0E-56 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 DDU33_04085 3efa806ea009fc62f266cbf11b2b6b1e 148 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.038 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 DDU33_04085 3efa806ea009fc62f266cbf11b2b6b1e 148 Gene3D G3DSA:1.10.1220.10 98 148 5.4E-9 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 Hamap MF_01151 Protein GrpE [grpE]. 3 195 21.528 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 PRINTS PR00773 GrpE protein signature 62 78 5.6E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 PRINTS PR00773 GrpE protein signature 147 162 5.6E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 PRINTS PR00773 GrpE protein signature 174 193 5.6E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 PRINTS PR00773 GrpE protein signature 90 105 5.6E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 SUPERFAMILY SSF51064 140 194 6.41E-18 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 Gene3D G3DSA:2.30.22.10 139 195 1.3E-23 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 Gene3D G3DSA:3.90.20.20 32 138 2.0E-30 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 ProSitePatterns PS01071 grpE protein signature. 150 193 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 Pfam PF01025 GrpE 25 194 1.2E-49 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DDU33_10155 8e129a7239431517fd9faeb1d5a66e48 195 SUPERFAMILY SSF58014 52 139 1.01E-23 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DDU33_06290 0f80d94b743f79d65ba40c018cbcf549 154 SUPERFAMILY SSF54637 16 153 7.16E-49 T 14-10-2018 IPR029069 HotDog domain superfamily DDU33_06290 0f80d94b743f79d65ba40c018cbcf549 154 Gene3D G3DSA:3.10.129.10 12 154 2.1E-63 T 14-10-2018 DDU33_06290 0f80d94b743f79d65ba40c018cbcf549 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 14 154 34.98 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_06290 0f80d94b743f79d65ba40c018cbcf549 154 Pfam PF07977 FabA-like domain 23 147 1.4E-38 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_06290 0f80d94b743f79d65ba40c018cbcf549 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 14 152 1.2E-60 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DDU33_05290 37425659d3bc910828b6cc4b313ac672 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DDU33_05290 37425659d3bc910828b6cc4b313ac672 316 Hamap MF_00492 Transaldolase [tal]. 1 316 51.706 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DDU33_05290 37425659d3bc910828b6cc4b313ac672 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 311 2.8E-103 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DDU33_05290 37425659d3bc910828b6cc4b313ac672 316 SUPERFAMILY SSF51569 1 315 4.71E-118 T 14-10-2018 DDU33_05290 37425659d3bc910828b6cc4b313ac672 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 1.0E-162 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DDU33_05290 37425659d3bc910828b6cc4b313ac672 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DDU33_05290 37425659d3bc910828b6cc4b313ac672 316 Gene3D G3DSA:3.20.20.70 1 316 2.9E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_10620 d705e0571975d286285b3677a25dfced 80 Gene3D G3DSA:3.30.110.40 3 78 4.9E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_10620 d705e0571975d286285b3677a25dfced 80 Pfam PF01206 Sulfurtransferase TusA 8 77 3.6E-24 T 14-10-2018 IPR001455 TusA-like domain DDU33_10620 d705e0571975d286285b3677a25dfced 80 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 1 79 29.445 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 DDU33_10620 d705e0571975d286285b3677a25dfced 80 SUPERFAMILY SSF64307 4 78 2.88E-26 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_10620 d705e0571975d286285b3677a25dfced 80 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 14-10-2018 IPR001455 TusA-like domain DDU33_09895 5b148f50facb4f398e950ece36c66964 162 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 9.0E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 Gene3D G3DSA:1.10.287.180 2 77 4.0E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 2.2E-72 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 53.781 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 PIRSF PIRSF006092 1 158 1.1E-50 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.969 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 Gene3D G3DSA:3.10.50.30 78 159 4.3E-32 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 SUPERFAMILY SSF46557 4 79 9.02E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 SUPERFAMILY SSF54534 81 156 9.81E-22 T 14-10-2018 DDU33_09895 5b148f50facb4f398e950ece36c66964 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.8E-25 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DDU33_08700 ce413ea7d1473669528ff332d09a1425 298 Gene3D G3DSA:3.30.70.1350 207 290 6.1E-28 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DDU33_08700 ce413ea7d1473669528ff332d09a1425 298 SUPERFAMILY SSF160240 209 287 6.54E-23 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DDU33_08700 ce413ea7d1473669528ff332d09a1425 298 Gene3D G3DSA:1.20.1510.10 8 206 4.7E-56 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DDU33_08700 ce413ea7d1473669528ff332d09a1425 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 287 3.2E-64 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DDU33_08700 ce413ea7d1473669528ff332d09a1425 298 Pfam PF01545 Cation efflux family 15 206 1.8E-35 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DDU33_08700 ce413ea7d1473669528ff332d09a1425 298 SUPERFAMILY SSF161111 7 207 7.06E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DDU33_08700 ce413ea7d1473669528ff332d09a1425 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.1E-23 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 Pfam PF07690 Major Facilitator Superfamily 9 350 7.5E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 101 122 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 74 98 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 246 266 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 334 357 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 274 295 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 43 62 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 364 383 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 299 319 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 131 153 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 159 179 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 217 234 1.2E-144 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 Gene3D G3DSA:1.20.1250.20 2 387 1.1E-62 T 14-10-2018 DDU33_00775 42c8f14ce0bd31d77426ff2063960760 401 SUPERFAMILY SSF103473 7 392 7.06E-57 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_00235 9c234cf22b513b6d721f96a5fa4774e1 330 SUPERFAMILY SSF53822 26 329 1.78E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_00235 9c234cf22b513b6d721f96a5fa4774e1 330 Gene3D G3DSA:3.40.50.2300 28 299 6.8E-110 T 14-10-2018 DDU33_00235 9c234cf22b513b6d721f96a5fa4774e1 330 Gene3D G3DSA:3.40.50.2300 134 278 6.8E-110 T 14-10-2018 DDU33_00235 9c234cf22b513b6d721f96a5fa4774e1 330 Pfam PF13407 Periplasmic binding protein domain 28 298 1.8E-62 T 14-10-2018 IPR025997 Periplasmic binding protein DDU33_00905 2f749d4074b6ffcfb506913977247090 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.8E-39 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 DDU33_00905 2f749d4074b6ffcfb506913977247090 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-33 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 DDU33_00905 2f749d4074b6ffcfb506913977247090 89 Gene3D G3DSA:1.10.1580.20 1 89 7.9E-39 T 14-10-2018 IPR038134 YihD-like superfamily DDU33_07575 c87d61f411cb4487ff97a5c58b2a98a2 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 217 7.7E-91 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DDU33_07575 c87d61f411cb4487ff97a5c58b2a98a2 224 Hamap MF_00238 Cytidylate kinase [cmk]. 4 222 34.349 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DDU33_07575 c87d61f411cb4487ff97a5c58b2a98a2 224 SUPERFAMILY SSF52540 1 221 1.33E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07575 c87d61f411cb4487ff97a5c58b2a98a2 224 Pfam PF02224 Cytidylate kinase 6 219 2.2E-78 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DDU33_07575 c87d61f411cb4487ff97a5c58b2a98a2 224 Gene3D G3DSA:3.40.50.300 1 223 2.6E-83 T 14-10-2018 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 335 1.7E-114 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 SUPERFAMILY SSF51246 285 359 2.04E-20 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 Gene3D G3DSA:3.40.50.20 8 75 3.0E-23 T 14-10-2018 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 332 32.7 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 Gene3D G3DSA:3.30.470.20 84 328 5.2E-92 T 14-10-2018 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 Gene3D G3DSA:3.30.1490.20 99 160 5.2E-92 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 SUPERFAMILY SSF56059 84 281 2.3E-56 T 14-10-2018 DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 Pfam PF02222 ATP-grasp domain 93 261 3.9E-58 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DDU33_08205 0564a7089c240a9911e4e0272fdf5185 362 SUPERFAMILY SSF52440 8 79 4.03E-13 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DDU33_00650 ff2970ca5cdbe3ebd8d10fb87727d29d 489 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 9 481 5.9E-205 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DDU33_00650 ff2970ca5cdbe3ebd8d10fb87727d29d 489 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 7 487 4.6E-222 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DDU33_00650 ff2970ca5cdbe3ebd8d10fb87727d29d 489 Gene3D G3DSA:3.30.9.10 113 178 8.8E-8 T 14-10-2018 DDU33_00650 ff2970ca5cdbe3ebd8d10fb87727d29d 489 SUPERFAMILY SSF51905 8 277 4.32E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_00650 ff2970ca5cdbe3ebd8d10fb87727d29d 489 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 4 489 49.637 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DDU33_00650 ff2970ca5cdbe3ebd8d10fb87727d29d 489 Gene3D G3DSA:3.50.50.60 10 228 8.8E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_04465 17f8e136c0b7e1e77bd9166904372596 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 198 271 1.3E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DDU33_04465 17f8e136c0b7e1e77bd9166904372596 328 Pfam PF01548 Transposase 8 158 1.2E-29 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DDU33_00865 261ce764eb3bef455cb3e4335eff2653 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 404 4.4E-144 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DDU33_00865 261ce764eb3bef455cb3e4335eff2653 415 Pfam PF04403 Paraquat-inducible protein A 46 195 1.6E-36 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like DDU33_00865 261ce764eb3bef455cb3e4335eff2653 415 Pfam PF04403 Paraquat-inducible protein A 250 404 5.4E-44 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 6.4E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 6.4E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 6.4E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 SMART SM00422 5 74 2.7E-30 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 Pfam PF09278 MerR, DNA binding 49 110 7.1E-19 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 Pfam PF00376 MerR family regulatory protein 6 43 1.4E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 SUPERFAMILY SSF46955 5 128 3.66E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DDU33_03005 9f971345e23b97fc29e5e4d1c6c99b13 133 Gene3D G3DSA:1.10.1660.10 2 128 7.2E-37 T 14-10-2018 DDU33_00470 3173c1028f4b35a7d607f3e23987d7f6 267 SMART SM00382 32 227 2.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00470 3173c1028f4b35a7d607f3e23987d7f6 267 Pfam PF00005 ABC transporter 23 171 1.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00470 3173c1028f4b35a7d607f3e23987d7f6 267 SUPERFAMILY SSF52540 7 238 4.09E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00470 3173c1028f4b35a7d607f3e23987d7f6 267 Gene3D G3DSA:3.40.50.300 5 253 2.6E-65 T 14-10-2018 DDU33_00470 3173c1028f4b35a7d607f3e23987d7f6 267 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_08250 2742b493ba17ed084b7852f1bd50fb08 290 SUPERFAMILY SSF81345 5 261 3.79E-34 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_08250 2742b493ba17ed084b7852f1bd50fb08 290 Pfam PF00950 ABC 3 transport family 10 265 1.4E-83 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DDU33_08250 2742b493ba17ed084b7852f1bd50fb08 290 Gene3D G3DSA:1.10.3470.10 38 268 3.5E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 SMART SM00938 4 105 1.2E-64 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.4E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 Gene3D G3DSA:3.30.70.120 1 112 6.9E-48 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 PRINTS PR00340 P-II protein signature 52 75 3.6E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 PRINTS PR00340 P-II protein signature 2 17 3.6E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 PRINTS PR00340 P-II protein signature 23 41 3.6E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 PRINTS PR00340 P-II protein signature 83 103 3.6E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 PIRSF PIRSF039144 1 112 1.3E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DDU33_04695 47b9e8f6e48b3ed84ff6b8155995d318 112 SUPERFAMILY SSF54913 1 112 3.15E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 460 3.0E-121 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 Gene3D G3DSA:3.40.140.20 392 529 8.0E-61 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 SMART SM00798 133 461 2.1E-216 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 529 45.702 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 Pfam PF02142 MGS-like domain 15 128 9.0E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 SMART SM00851 15 128 8.5E-64 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 Gene3D G3DSA:3.40.50.1380 1 194 1.5E-87 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 SUPERFAMILY SSF53927 221 529 5.52E-130 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 529 1.4E-261 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 Gene3D G3DSA:3.40.140.20 218 373 2.9E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 PIRSF PIRSF000414 1 529 1.4E-228 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DDU33_10270 5517b63bf25e41d4078ac481732c1a4c 529 SUPERFAMILY SSF52335 4 192 2.62E-72 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 SUPERFAMILY SSF52540 447 719 3.29E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 SMART SM00487 307 517 2.3E-9 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 Pfam PF04851 Type III restriction enzyme, res subunit 312 480 1.6E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 Gene3D G3DSA:3.40.50.300 499 740 5.8E-35 T 14-10-2018 DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 8 221 2.6E-38 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 SUPERFAMILY SSF52540 276 539 7.59E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 Gene3D G3DSA:3.40.50.300 310 498 3.2E-49 T 14-10-2018 DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 Gene3D G3DSA:3.90.1570.50 108 306 5.0E-18 T 14-10-2018 DDU33_02930 613cd3914ea9b697e2915eb6364c7f58 1086 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 21 735 2.1E-147 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 DDU33_09020 7deb7da1410ec077e9e625408d8dbf25 170 Pfam PF01814 Hemerythrin HHE cation binding domain 15 142 1.4E-11 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DDU33_09020 7deb7da1410ec077e9e625408d8dbf25 170 Gene3D G3DSA:1.20.120.520 2 170 2.2E-40 T 14-10-2018 DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 Gene3D G3DSA:2.160.10.10 102 311 2.4E-61 T 14-10-2018 DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 90 3.3E-22 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 Gene3D G3DSA:3.40.1390.10 1 101 5.8E-31 T 14-10-2018 DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 257 7.7E-5 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 127 1.7E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 181 2.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 331 3.7E-114 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 SUPERFAMILY SSF51161 32 318 2.05E-80 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 328 34.231 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DDU33_06285 95d0f0f20208d22a660cc44004e62489 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 227 255 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 SUPERFAMILY SSF54292 5 108 1.71E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 PRINTS PR00355 Adrenodoxin signature 42 52 3.3E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 PRINTS PR00355 Adrenodoxin signature 83 91 3.3E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 PRINTS PR00355 Adrenodoxin signature 60 74 3.3E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 5.5E-62 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 2.7E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DDU33_09385 70dff8758beed88d32aae4b76a890262 113 Gene3D G3DSA:3.10.20.30 1 113 1.6E-39 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_00995 404a45babca379ce36f7954db263de03 141 PIRSF PIRSF006105 1 141 1.3E-45 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB DDU33_00995 404a45babca379ce36f7954db263de03 141 Gene3D G3DSA:1.10.1130.10 53 120 5.4E-30 T 14-10-2018 DDU33_00995 404a45babca379ce36f7954db263de03 141 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 24 133 5.7E-40 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB DDU33_00995 404a45babca379ce36f7954db263de03 141 SUPERFAMILY SSF48695 27 137 1.43E-39 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DDU33_02580 2730be7453965bdc8bd0fe25b52ac29c 88 Pfam PF04077 DsrH like protein 9 82 8.1E-14 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 DDU33_02580 2730be7453965bdc8bd0fe25b52ac29c 88 SUPERFAMILY SSF75169 1 86 2.35E-16 T 14-10-2018 IPR027396 DsrEFH-like DDU33_02580 2730be7453965bdc8bd0fe25b52ac29c 88 Gene3D G3DSA:3.40.1260.10 1 87 1.4E-13 T 14-10-2018 IPR027396 DsrEFH-like DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 Gene3D G3DSA:3.20.20.150 1 278 2.5E-111 T 14-10-2018 DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 SMART SM00518 3 279 6.2E-122 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 277 1.4E-107 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 2.4E-38 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.295 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DDU33_10210 9f3b29b92eb6127fff54712a1645499d 279 SUPERFAMILY SSF51658 1 277 1.96E-100 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DDU33_08365 1511d43e5dbcf3866da1cf7b196b945a 131 Pfam PF03466 LysR substrate binding domain 7 121 5.1E-14 T 14-10-2018 IPR005119 LysR, substrate-binding DDU33_08365 1511d43e5dbcf3866da1cf7b196b945a 131 SUPERFAMILY SSF53850 9 126 4.34E-13 T 14-10-2018 DDU33_08365 1511d43e5dbcf3866da1cf7b196b945a 131 Gene3D G3DSA:3.40.190.290 6 123 2.8E-18 T 14-10-2018 DDU33_06555 d9f65775f58517debd629823f9acef3c 180 SUPERFAMILY SSF46689 7 62 1.12E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_06555 d9f65775f58517debd629823f9acef3c 180 Gene3D G3DSA:1.10.357.10 2 177 5.4E-26 T 14-10-2018 DDU33_08595 a0d069e3c831819c5970ecb45b18a9ab 302 Gene3D G3DSA:3.40.50.1980 33 288 2.6E-76 T 14-10-2018 DDU33_08595 a0d069e3c831819c5970ecb45b18a9ab 302 SUPERFAMILY SSF53807 24 284 2.24E-57 T 14-10-2018 DDU33_08595 a0d069e3c831819c5970ecb45b18a9ab 302 Gene3D G3DSA:3.40.50.12260 171 276 2.6E-76 T 14-10-2018 DDU33_08595 a0d069e3c831819c5970ecb45b18a9ab 302 Pfam PF01497 Periplasmic binding protein 42 278 6.2E-31 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 Gene3D G3DSA:3.90.1280.10 229 289 1.5E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 Hamap MF_00117 33 kDa chaperonin [hslO]. 7 288 32.525 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 Gene3D G3DSA:1.10.287.480 182 228 1.6E-20 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 Pfam PF01430 Hsp33 protein 8 277 1.2E-79 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 SUPERFAMILY SSF118352 228 287 2.62E-16 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 Gene3D G3DSA:3.55.30.10 2 179 5.3E-61 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 SUPERFAMILY SSF64397 7 235 2.22E-75 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DDU33_00645 d49dc78f62c2a84f884b0fe34db0729d 296 PIRSF PIRSF005261 1 289 2.4E-71 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DDU33_06575 5fdc13eda3fa3412a96764cfacfb2cbb 149 Pfam PF01638 HxlR-like helix-turn-helix 19 104 4.5E-22 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DDU33_06575 5fdc13eda3fa3412a96764cfacfb2cbb 149 SUPERFAMILY SSF46785 5 143 7.27E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_06575 5fdc13eda3fa3412a96764cfacfb2cbb 149 Gene3D G3DSA:1.10.10.10 2 149 4.1E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03365 98b6a620bed2ddbe27e978056f7fbecb 109 SUPERFAMILY SSF103481 7 106 4.84E-19 T 14-10-2018 DDU33_03365 98b6a620bed2ddbe27e978056f7fbecb 109 Gene3D G3DSA:1.10.3730.20 1 109 2.7E-34 T 14-10-2018 DDU33_03365 98b6a620bed2ddbe27e978056f7fbecb 109 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.1E-24 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 Pfam PF04052 TolB amino-terminal domain 29 124 4.3E-27 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 24 419 3.4E-138 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 SUPERFAMILY SSF69304 157 420 2.88E-48 T 14-10-2018 DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 9 418 43.228 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 SUPERFAMILY SSF52964 34 161 4.71E-34 T 14-10-2018 DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 Pfam PF07676 WD40-like Beta Propeller Repeat 280 314 2.7E-13 T 14-10-2018 IPR011659 WD40-like Beta Propeller DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 Pfam PF07676 WD40-like Beta Propeller Repeat 242 270 1.1E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 Pfam PF07676 WD40-like Beta Propeller Repeat 361 388 1.5E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 Gene3D G3DSA:3.40.50.10070 27 164 5.8E-41 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 DDU33_06065 fa59e48e2244b39e89bc05771d50c513 425 Gene3D G3DSA:2.120.10.30 165 425 6.7E-87 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DDU33_05760 63ee7abab47b962476cb62a73e49d6bd 337 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 322 27.315 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDU33_05760 63ee7abab47b962476cb62a73e49d6bd 337 Gene3D G3DSA:1.20.120.920 84 337 2.1E-72 T 14-10-2018 DDU33_05760 63ee7abab47b962476cb62a73e49d6bd 337 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 331 1.2E-81 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDU33_05760 63ee7abab47b962476cb62a73e49d6bd 337 Pfam PF01867 CRISPR associated protein Cas1 8 291 1.8E-99 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DDU33_05760 63ee7abab47b962476cb62a73e49d6bd 337 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 3 336 2.1E-151 T 14-10-2018 IPR019856 CRISPR-associated protein Cas1, DVULG subtype GO:0004520|GO:0043571|GO:0046872 DDU33_05760 63ee7abab47b962476cb62a73e49d6bd 337 Gene3D G3DSA:3.100.10.20 5 82 2.5E-22 T 14-10-2018 DDU33_04415 9669b4559d4d3b95607504a8af5c976b 252 Pfam PF02390 Putative methyltransferase 73 244 1.4E-59 T 14-10-2018 DDU33_04415 9669b4559d4d3b95607504a8af5c976b 252 Gene3D G3DSA:3.40.50.150 40 251 1.4E-67 T 14-10-2018 DDU33_04415 9669b4559d4d3b95607504a8af5c976b 252 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 34 249 30.461 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DDU33_04415 9669b4559d4d3b95607504a8af5c976b 252 SUPERFAMILY SSF53335 26 249 8.59E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_04415 9669b4559d4d3b95607504a8af5c976b 252 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 58 249 3.1E-72 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DDU33_09595 35977d27f90a087b5c4f9334932ea2c1 397 Gene3D G3DSA:3.90.1150.10 30 390 1.2E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_09595 35977d27f90a087b5c4f9334932ea2c1 397 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 394 2.2E-110 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DDU33_09595 35977d27f90a087b5c4f9334932ea2c1 397 SUPERFAMILY SSF53383 34 396 1.71E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_09595 35977d27f90a087b5c4f9334932ea2c1 397 Pfam PF00155 Aminotransferase class I and II 69 390 8.2E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDU33_09595 35977d27f90a087b5c4f9334932ea2c1 397 Gene3D G3DSA:3.40.640.10 79 298 1.2E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_00880 8ce2657bf4d565a497f3639b2678481b 99 SMART SM00530 31 86 9.7E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_00880 8ce2657bf4d565a497f3639b2678481b 99 SUPERFAMILY SSF47413 32 89 5.36E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_00880 8ce2657bf4d565a497f3639b2678481b 99 Gene3D G3DSA:1.10.260.40 9 89 1.0E-14 T 14-10-2018 DDU33_00880 8ce2657bf4d565a497f3639b2678481b 99 Pfam PF01381 Helix-turn-helix 33 83 1.8E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_08465 2eebee2db1045ac962e06d74dcee572f 285 Pfam PF04228 Putative neutral zinc metallopeptidase 1 282 8.7E-121 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative DDU33_03350 bd2a81350f43c70c40a920e0984146c3 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DDU33_03350 bd2a81350f43c70c40a920e0984146c3 480 Gene3D G3DSA:3.40.309.10 251 441 9.8E-176 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DDU33_03350 bd2a81350f43c70c40a920e0984146c3 480 SUPERFAMILY SSF53720 2 475 3.93E-161 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DDU33_03350 bd2a81350f43c70c40a920e0984146c3 480 Gene3D G3DSA:3.40.605.10 21 466 9.8E-176 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DDU33_03350 bd2a81350f43c70c40a920e0984146c3 480 Pfam PF00171 Aldehyde dehydrogenase family 15 472 1.2E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DDU33_03350 bd2a81350f43c70c40a920e0984146c3 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DDU33_05910 0d1846d2d2c7a256990c6d5077a15da7 293 Gene3D G3DSA:3.90.550.10 1 243 9.5E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_05910 0d1846d2d2c7a256990c6d5077a15da7 293 SUPERFAMILY SSF53448 1 214 4.58E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_05910 0d1846d2d2c7a256990c6d5077a15da7 293 Pfam PF00535 Glycosyl transferase family 2 3 127 5.0E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_05945 147ddcd71c19774ec1348f4c8a3061fd 239 SUPERFAMILY SSF53167 1 234 1.57E-94 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DDU33_05945 147ddcd71c19774ec1348f4c8a3061fd 239 Gene3D G3DSA:3.40.50.1580 1 238 1.3E-76 T 14-10-2018 DDU33_05945 147ddcd71c19774ec1348f4c8a3061fd 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 3.5E-123 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DDU33_05945 147ddcd71c19774ec1348f4c8a3061fd 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DDU33_05945 147ddcd71c19774ec1348f4c8a3061fd 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 52.353 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DDU33_05945 147ddcd71c19774ec1348f4c8a3061fd 239 Pfam PF01048 Phosphorylase superfamily 14 216 2.1E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DDU33_03380 bd34f2911834c79b8194ae3dc059a4c5 692 SUPERFAMILY SSF56935 35 692 7.14E-121 T 14-10-2018 DDU33_03380 bd34f2911834c79b8194ae3dc059a4c5 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 2.7E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_03380 bd34f2911834c79b8194ae3dc059a4c5 692 Gene3D G3DSA:2.40.170.20 167 692 3.0E-124 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DDU33_03380 bd34f2911834c79b8194ae3dc059a4c5 692 Pfam PF00593 TonB dependent receptor 200 691 3.4E-57 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DDU33_03380 bd34f2911834c79b8194ae3dc059a4c5 692 Gene3D G3DSA:2.170.130.10 30 161 7.2E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_00410 e03fd944638d9076bad79c424fd51b20 452 SUPERFAMILY SSF52151 52 385 2.46E-30 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DDU33_00410 e03fd944638d9076bad79c424fd51b20 452 Pfam PF01734 Patatin-like phospholipase 56 301 2.7E-18 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DDU33_04345 78e10f5d57cf9716b48cb5dfb2d26164 265 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 33 259 21.09 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 DDU33_04345 78e10f5d57cf9716b48cb5dfb2d26164 265 Gene3D G3DSA:3.40.50.11690 134 264 1.8E-36 T 14-10-2018 DDU33_04345 78e10f5d57cf9716b48cb5dfb2d26164 265 Gene3D G3DSA:3.10.20.310 62 133 3.7E-18 T 14-10-2018 DDU33_04345 78e10f5d57cf9716b48cb5dfb2d26164 265 Pfam PF03799 Cell division protein FtsQ 137 251 1.2E-22 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB DDU33_04345 78e10f5d57cf9716b48cb5dfb2d26164 265 Pfam PF08478 POTRA domain, FtsQ-type 71 133 8.0E-14 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type DDU33_07915 d557a21bd0c0260de9a849d4603b9ab2 708 Pfam PF10145 Phage-related minor tail protein 88 284 1.4E-27 T 14-10-2018 IPR010090 Phage tail tape measure protein DDU33_07915 d557a21bd0c0260de9a849d4603b9ab2 708 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 49 389 1.3E-17 T 14-10-2018 IPR010090 Phage tail tape measure protein DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 850 262.22 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 SUPERFAMILY SSF55021 670 738 1.21E-7 T 14-10-2018 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 SMART SM00471 431 578 5.8E-11 T 14-10-2018 IPR003607 HD/PDEase domain DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 Gene3D G3DSA:1.10.3210.10 426 565 1.8E-7 T 14-10-2018 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 PIRSF PIRSF006288 1 850 2.8E-274 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 SUPERFAMILY SSF109604 403 524 9.42E-13 T 14-10-2018 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 SUPERFAMILY SSF81593 181 295 4.87E-8 T 14-10-2018 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 SUPERFAMILY SSF55021 776 838 2.08E-6 T 14-10-2018 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 Pfam PF08335 GlnD PII-uridylyltransferase 161 298 1.6E-30 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 SUPERFAMILY SSF81301 27 155 1.78E-16 T 14-10-2018 DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 Pfam PF01966 HD domain 435 568 5.3E-11 T 14-10-2018 IPR006674 HD domain DDU33_07440 31977a8cd56c109e1c6eacf7b7d2d2d5 850 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 15 848 2.7E-272 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 Gene3D G3DSA:3.30.360.10 136 353 7.4E-154 T 14-10-2018 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 SMART SM00859 3 123 6.4E-27 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 PIRSF PIRSF000148 1 371 1.5E-70 T 14-10-2018 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 3 369 7.4E-196 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 Gene3D G3DSA:3.40.50.720 4 360 7.4E-154 T 14-10-2018 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 2.5E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 356 4.5E-59 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 264 278 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 370 34.346 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 SUPERFAMILY SSF51735 1 148 2.06E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_04830 8ab6aef31ed08daf3eb5ebe3076ce831 371 SUPERFAMILY SSF55347 135 357 8.42E-76 T 14-10-2018 DDU33_05350 28f6dcae34ec405ca841a5d4dc0f120b 327 SUPERFAMILY SSF52540 10 259 1.52E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05350 28f6dcae34ec405ca841a5d4dc0f120b 327 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_05350 28f6dcae34ec405ca841a5d4dc0f120b 327 Pfam PF00005 ABC transporter 37 187 9.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_05350 28f6dcae34ec405ca841a5d4dc0f120b 327 SMART SM00382 45 237 3.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_05350 28f6dcae34ec405ca841a5d4dc0f120b 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 304 1.9E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_05350 28f6dcae34ec405ca841a5d4dc0f120b 327 Gene3D G3DSA:3.40.50.300 8 327 3.2E-100 T 14-10-2018 DDU33_05350 28f6dcae34ec405ca841a5d4dc0f120b 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 6.7E-29 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DDU33_00180 157574c1b62eee9408d8fba37c3732a1 390 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 390 1.1E-118 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DDU33_00180 157574c1b62eee9408d8fba37c3732a1 390 Pfam PF12704 MacB-like periplasmic core domain 28 189 3.3E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DDU33_00180 157574c1b62eee9408d8fba37c3732a1 390 Pfam PF02687 FtsX-like permease family 289 383 3.3E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDU33_05555 0ac0f7668ef45c2c1092afb6c5c1fba5 83 Pfam PF04400 (Na+)-NQR maturation NqrM 23 62 7.9E-18 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 Gene3D G3DSA:3.40.190.10 126 314 4.6E-116 T 14-10-2018 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 Gene3D G3DSA:3.40.190.10 25 309 4.6E-116 T 14-10-2018 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PIRSF PIRSF019574 1 342 4.2E-118 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 SUPERFAMILY SSF53850 20 340 8.15E-90 T 14-10-2018 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 198 217 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 143 157 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 86 99 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 70 84 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 161 180 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 117 133 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 242 261 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 287 313 7.3E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DDU33_05150 ae623be2697836b48e79ba3ab4ea994c 343 Pfam PF13416 Bacterial extracellular solute-binding protein 36 305 9.7E-43 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 262 3.1E-58 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 Gene3D G3DSA:3.40.50.720 3 274 1.1E-139 T 14-10-2018 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 Gene3D G3DSA:3.90.25.10 194 329 1.1E-139 T 14-10-2018 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.6E-6 T 14-10-2018 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 9.6E-6 T 14-10-2018 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 9.6E-6 T 14-10-2018 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.6E-6 T 14-10-2018 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 8.0E-139 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DDU33_00215 57e717b85d1cb9f774c940cadbfc858c 338 SUPERFAMILY SSF51735 1 337 1.78E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_05010 206d81b0d25251e362b8433f90961c4f 287 Pfam PF12710 haloacid dehalogenase-like hydrolase 112 245 5.0E-13 T 14-10-2018 DDU33_05010 206d81b0d25251e362b8433f90961c4f 287 Gene3D G3DSA:3.40.50.1000 70 279 1.3E-100 T 14-10-2018 IPR023214 HAD superfamily DDU33_05010 206d81b0d25251e362b8433f90961c4f 287 SUPERFAMILY SSF56784 76 279 6.74E-49 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_05010 206d81b0d25251e362b8433f90961c4f 287 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 76 246 4.4E-27 T 14-10-2018 DDU33_05010 206d81b0d25251e362b8433f90961c4f 287 Gene3D G3DSA:1.10.150.210 84 146 1.3E-100 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 DDU33_05010 206d81b0d25251e362b8433f90961c4f 287 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 61 279 2.3E-83 T 14-10-2018 DDU33_05010 206d81b0d25251e362b8433f90961c4f 287 Gene3D G3DSA:3.30.70.2020 4 282 1.3E-100 T 14-10-2018 DDU33_05510 5d5c865806cf0983a2eecfb400396963 206 PIRSF PIRSF000370 6 206 3.8E-41 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DDU33_05510 5d5c865806cf0983a2eecfb400396963 206 SUPERFAMILY SSF102114 33 130 3.14E-16 T 14-10-2018 DDU33_05510 5d5c865806cf0983a2eecfb400396963 206 Gene3D G3DSA:3.20.20.70 7 206 5.2E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_05510 5d5c865806cf0983a2eecfb400396963 206 Pfam PF13394 4Fe-4S single cluster domain 29 109 4.7E-10 T 14-10-2018 DDU33_05510 5d5c865806cf0983a2eecfb400396963 206 Pfam PF04055 Radical SAM superfamily 33 116 4.1E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_05510 5d5c865806cf0983a2eecfb400396963 206 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 8 206 35.604 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DDU33_00785 165c0ccc428101deea85182207f0898b 228 Gene3D G3DSA:1.10.10.10 4 105 1.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_00785 165c0ccc428101deea85182207f0898b 228 SMART SM00418 17 96 9.1E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_00785 165c0ccc428101deea85182207f0898b 228 SUPERFAMILY SSF46785 12 96 1.36E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_00785 165c0ccc428101deea85182207f0898b 228 Pfam PF12840 Helix-turn-helix domain 18 75 1.5E-8 T 14-10-2018 DDU33_07060 1e2dfc0322befba99a82b47943886e2e 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 4.4E-92 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DDU33_07060 1e2dfc0322befba99a82b47943886e2e 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 41.859 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DDU33_02925 b447617f4cf0c1bd23871238b2449ae4 644 Gene3D G3DSA:3.30.565.10 2 220 1.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_02925 b447617f4cf0c1bd23871238b2449ae4 644 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 20 132 2.1E-17 T 14-10-2018 DDU33_02925 b447617f4cf0c1bd23871238b2449ae4 644 SUPERFAMILY SSF55874 19 199 3.14E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DDU33_06500 3940b6c79bb32094f2ba53753f4980fa 361 Pfam PF00149 Calcineurin-like phosphoesterase 142 304 7.4E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDU33_06500 3940b6c79bb32094f2ba53753f4980fa 361 Gene3D G3DSA:3.60.21.10 141 335 2.5E-20 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DDU33_06500 3940b6c79bb32094f2ba53753f4980fa 361 SUPERFAMILY SSF56300 142 358 4.59E-37 T 14-10-2018 DDU33_06090 37a71cd203d350cf883a909be8f173b6 228 Gene3D G3DSA:2.40.50.90 20 147 2.4E-32 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily DDU33_06090 37a71cd203d350cf883a909be8f173b6 228 SMART SM00318 25 143 5.1E-31 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DDU33_06090 37a71cd203d350cf883a909be8f173b6 228 Pfam PF00565 Staphylococcal nuclease homologue 50 143 1.6E-24 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DDU33_06090 37a71cd203d350cf883a909be8f173b6 228 ProSitePatterns PS01284 Thermonuclease family signature 2. 90 100 - T 14-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 DDU33_06090 37a71cd203d350cf883a909be8f173b6 228 ProSitePatterns PS01123 Thermonuclease family signature 1. 36 60 - T 14-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 DDU33_06090 37a71cd203d350cf883a909be8f173b6 228 SUPERFAMILY SSF50199 21 148 1.57E-36 T 14-10-2018 DDU33_00310 7baf5e610998051bad0c224be01bea84 197 SUPERFAMILY SSF52317 4 196 1.58E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_00310 7baf5e610998051bad0c224be01bea84 197 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 196 33.024 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DDU33_00310 7baf5e610998051bad0c224be01bea84 197 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 195 6.7E-66 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DDU33_00310 7baf5e610998051bad0c224be01bea84 197 PRINTS PR00097 Anthranilate synthase component II signature 98 106 2.0E-5 T 14-10-2018 DDU33_00310 7baf5e610998051bad0c224be01bea84 197 PRINTS PR00097 Anthranilate synthase component II signature 174 187 2.0E-5 T 14-10-2018 DDU33_00310 7baf5e610998051bad0c224be01bea84 197 PRINTS PR00097 Anthranilate synthase component II signature 73 84 2.0E-5 T 14-10-2018 DDU33_00310 7baf5e610998051bad0c224be01bea84 197 Pfam PF00117 Glutamine amidotransferase class-I 17 194 4.1E-21 T 14-10-2018 IPR017926 Glutamine amidotransferase DDU33_00310 7baf5e610998051bad0c224be01bea84 197 PIRSF PIRSF000495 2 197 2.9E-65 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DDU33_00310 7baf5e610998051bad0c224be01bea84 197 Gene3D G3DSA:3.40.50.880 1 197 4.0E-69 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_02560 2d883f288e5135ba03ccb74eb6ab931b 241 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 139 5.0E-29 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DDU33_02560 2d883f288e5135ba03ccb74eb6ab931b 241 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 148 233 7.6E-28 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DDU33_02560 2d883f288e5135ba03ccb74eb6ab931b 241 Gene3D G3DSA:1.10.287.460 19 128 5.7E-18 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 DDU33_02560 2d883f288e5135ba03ccb74eb6ab931b 241 Gene3D G3DSA:3.10.50.40 129 241 4.0E-40 T 14-10-2018 DDU33_02560 2d883f288e5135ba03ccb74eb6ab931b 241 SUPERFAMILY SSF54534 32 236 2.95E-56 T 14-10-2018 DDU33_09760 7914fff23e8de0b80504aed3d9da47a2 263 Gene3D G3DSA:1.10.3810.10 68 261 3.5E-52 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_09760 7914fff23e8de0b80504aed3d9da47a2 263 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 36 256 37.618 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_09760 7914fff23e8de0b80504aed3d9da47a2 263 Pfam PF00912 Transglycosylase 83 249 1.9E-49 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_09760 7914fff23e8de0b80504aed3d9da47a2 263 SUPERFAMILY SSF53955 72 254 3.37E-57 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_09760 7914fff23e8de0b80504aed3d9da47a2 263 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 52 253 7.8E-82 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_00430 a5389ff37ff1a2c4f95182479650dff9 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 6.6E-42 T 14-10-2018 IPR013527 YicC-like, N-terminal DDU33_00430 a5389ff37ff1a2c4f95182479650dff9 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 7.7E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 DDU33_00430 a5389ff37ff1a2c4f95182479650dff9 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 3.0E-117 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 DDU33_03650 1e9d7e9f8787ba6f3e41459f40d57944 166 Pfam PF08534 Redoxin 19 162 1.2E-22 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DDU33_03650 1e9d7e9f8787ba6f3e41459f40d57944 166 Gene3D G3DSA:3.40.30.10 1 166 3.4E-45 T 14-10-2018 DDU33_03650 1e9d7e9f8787ba6f3e41459f40d57944 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 37.232 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 DDU33_03650 1e9d7e9f8787ba6f3e41459f40d57944 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 DDU33_03650 1e9d7e9f8787ba6f3e41459f40d57944 166 SUPERFAMILY SSF52833 1 163 4.19E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_10560 bcdd1c21ee4e2ea0a9cdddb138a5b383 199 SUPERFAMILY SSF51161 3 196 1.14E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_10560 bcdd1c21ee4e2ea0a9cdddb138a5b383 199 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_10560 bcdd1c21ee4e2ea0a9cdddb138a5b383 199 Gene3D G3DSA:2.160.10.10 1 199 2.3E-70 T 14-10-2018 DDU33_10560 bcdd1c21ee4e2ea0a9cdddb138a5b383 199 Pfam PF12464 Maltose acetyltransferase 7 54 7.3E-13 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DDU33_10560 bcdd1c21ee4e2ea0a9cdddb138a5b383 199 SMART SM01266 5 58 1.4E-12 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DDU33_10560 bcdd1c21ee4e2ea0a9cdddb138a5b383 199 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 165 1.2E-11 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 Gene3D G3DSA:1.10.1740.10 312 396 2.5E-25 T 14-10-2018 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 Gene3D G3DSA:3.40.50.720 1 150 1.2E-55 T 14-10-2018 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 SUPERFAMILY SSF69055 301 393 6.28E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 2.1E-37 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 SUPERFAMILY SSF55347 126 274 6.21E-62 T 14-10-2018 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.8E-47 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 PIRSF PIRSF006205 1 396 3.3E-153 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 SUPERFAMILY SSF51735 2 150 2.25E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.7E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 393 1.1E-180 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DDU33_06950 efea4c6046f130963515b7d422a7fa8c 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 45.784 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DDU33_10650 92ea3d907f91c09291551a8f8a567b57 174 Pfam PF00258 Flavodoxin 6 160 2.3E-29 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DDU33_10650 92ea3d907f91c09291551a8f8a567b57 174 SUPERFAMILY SSF52218 4 170 5.28E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_10650 92ea3d907f91c09291551a8f8a567b57 174 Gene3D G3DSA:3.40.50.360 3 174 7.2E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_10650 92ea3d907f91c09291551a8f8a567b57 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.1E-69 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDU33_10650 92ea3d907f91c09291551a8f8a567b57 174 PIRSF PIRSF038996 1 172 4.5E-66 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 DDU33_03305 a0827414c872d6646893e4cc0ed35471 211 Pfam PF07274 Protein of unknown function (DUF1440) 24 187 3.2E-50 T 14-10-2018 IPR009898 Protein of unknown function DUF1440 DDU33_09195 8245b2e7ce1e1c7c7cf5b91cbed0dbbc 483 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 475 4.6E-172 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_09195 8245b2e7ce1e1c7c7cf5b91cbed0dbbc 483 PIRSF PIRSF002457 1 476 1.1E-127 T 14-10-2018 IPR030676 Citrate carrier CitT-related DDU33_09195 8245b2e7ce1e1c7c7cf5b91cbed0dbbc 483 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 470 4.0E-159 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_05090 6cb9acf14eaaad6368c68aa34a95f581 209 Pfam PF00753 Metallo-beta-lactamase superfamily 11 192 3.6E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_05090 6cb9acf14eaaad6368c68aa34a95f581 209 SMART SM00849 13 192 5.1E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_05090 6cb9acf14eaaad6368c68aa34a95f581 209 Gene3D G3DSA:3.60.15.10 2 209 1.5E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_05090 6cb9acf14eaaad6368c68aa34a95f581 209 SUPERFAMILY SSF56281 6 209 2.49E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_05500 b0fc413b606af6eee054cd25ad49c8ae 221 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 218 48.692 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDU33_05500 b0fc413b606af6eee054cd25ad49c8ae 221 Gene3D G3DSA:3.40.50.620 4 219 2.4E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_05500 b0fc413b606af6eee054cd25ad49c8ae 221 Pfam PF06508 Queuosine biosynthesis protein QueC 6 212 4.2E-77 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDU33_05500 b0fc413b606af6eee054cd25ad49c8ae 221 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 205 1.7E-80 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDU33_05500 b0fc413b606af6eee054cd25ad49c8ae 221 PIRSF PIRSF006293 3 220 7.7E-75 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DDU33_05500 b0fc413b606af6eee054cd25ad49c8ae 221 SUPERFAMILY SSF52402 5 215 3.75E-60 T 14-10-2018 DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 8.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 Gene3D G3DSA:2.40.100.10 1 169 1.5E-66 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 PIRSF PIRSF001467 1 168 5.4E-27 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 167 5.6E-50 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DDU33_09350 c85c875af482a26a77210f7d22ad632c 169 SUPERFAMILY SSF50891 2 168 2.05E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DDU33_04245 ff718a46497e497bb2680ffa95dcad80 125 Pfam PF00825 Ribonuclease P 6 111 1.2E-29 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDU33_04245 ff718a46497e497bb2680ffa95dcad80 125 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 16.885 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDU33_04245 ff718a46497e497bb2680ffa95dcad80 125 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 101 8.0E-33 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDU33_04245 ff718a46497e497bb2680ffa95dcad80 125 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 2.4E-31 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DDU33_04245 ff718a46497e497bb2680ffa95dcad80 125 Gene3D G3DSA:3.30.230.10 1 119 3.2E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_04245 ff718a46497e497bb2680ffa95dcad80 125 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 DDU33_04245 ff718a46497e497bb2680ffa95dcad80 125 SUPERFAMILY SSF54211 5 117 1.26E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_06790 b0838f8e8850aa765124bb8d1a1e665a 552 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 102 185 7.6E-38 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DDU33_06790 b0838f8e8850aa765124bb8d1a1e665a 552 Pfam PF02378 Phosphotransferase system, EIIC 228 485 5.5E-20 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DDU33_06790 b0838f8e8850aa765124bb8d1a1e665a 552 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 103 187 2.0E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DDU33_06790 b0838f8e8850aa765124bb8d1a1e665a 552 Gene3D G3DSA:3.40.50.2300 89 201 1.1E-36 T 14-10-2018 DDU33_06790 b0838f8e8850aa765124bb8d1a1e665a 552 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 213 547 5.6E-141 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DDU33_06790 b0838f8e8850aa765124bb8d1a1e665a 552 SUPERFAMILY SSF52794 100 201 2.62E-33 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DDU33_09820 df624c443cba801773579dec1a1aefcd 197 Gene3D G3DSA:3.90.950.10 1 197 1.1E-76 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDU33_09820 df624c443cba801773579dec1a1aefcd 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 196 2.0E-65 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DDU33_09820 df624c443cba801773579dec1a1aefcd 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 4 197 47.806 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DDU33_09820 df624c443cba801773579dec1a1aefcd 197 Pfam PF01725 Ham1 family 6 194 7.4E-55 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DDU33_09820 df624c443cba801773579dec1a1aefcd 197 SUPERFAMILY SSF52972 3 196 1.05E-69 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DDU33_06260 6115734d714536322d1f6a432d2651b8 230 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 174 191 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DDU33_06260 6115734d714536322d1f6a432d2651b8 230 Gene3D G3DSA:3.40.1180.10 1 230 3.6E-93 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DDU33_06260 6115734d714536322d1f6a432d2651b8 230 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 229 38.697 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDU33_06260 6115734d714536322d1f6a432d2651b8 230 Pfam PF01255 Putative undecaprenyl diphosphate synthase 8 228 8.2E-82 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDU33_06260 6115734d714536322d1f6a432d2651b8 230 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 228 3.1E-98 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DDU33_06260 6115734d714536322d1f6a432d2651b8 230 SUPERFAMILY SSF64005 1 224 2.35E-87 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DDU33_04210 fa4065799e1cd370ad82cd1bf57961b0 284 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 59 191 1.2E-47 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 SUPERFAMILY SSF52313 6 229 1.96E-93 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 225 7.9E-105 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 Gene3D G3DSA:1.10.287.610 103 150 2.1E-90 T 14-10-2018 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 Pfam PF00318 Ribosomal protein S2 9 224 1.2E-90 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 Gene3D G3DSA:3.40.50.10490 8 216 2.1E-90 T 14-10-2018 DDU33_08760 5293ab3d75301827a3c5c3b75e21ac67 236 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.368 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_05850 1a097cf606a47ca3a93ea4a3a85860ef 206 Pfam PF01810 LysE type translocator 16 204 4.6E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDU33_05850 1a097cf606a47ca3a93ea4a3a85860ef 206 PIRSF PIRSF006324 1 206 9.1E-57 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 Gene3D G3DSA:3.40.1410.10 89 244 1.4E-18 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 Gene3D G3DSA:1.10.10.10 12 79 5.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 Pfam PF07702 UTRA domain 105 239 3.9E-14 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 SMART SM00345 20 79 2.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 SMART SM00866 100 240 3.9E-10 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 78 2.4E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 SUPERFAMILY SSF46785 11 86 4.77E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_03955 79efaa59e7a0fb9e9104226cb1dd56aa 246 SUPERFAMILY SSF64288 67 244 2.04E-23 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DDU33_08085 7f3c79ed4e1b531f25c5d03b2e16fdd9 319 Pfam PF07669 Eco57I restriction-modification methylase 1 101 7.6E-38 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 DDU33_08085 7f3c79ed4e1b531f25c5d03b2e16fdd9 319 SUPERFAMILY SSF53335 2 146 1.36E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_08085 7f3c79ed4e1b531f25c5d03b2e16fdd9 319 Gene3D G3DSA:3.40.50.150 1 201 6.9E-14 T 14-10-2018 DDU33_08085 7f3c79ed4e1b531f25c5d03b2e16fdd9 319 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 6 12 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DDU33_05920 2ea700a18a1e0d2efb32fc5fb2d25b3a 168 Gene3D G3DSA:3.30.1060.10 2 168 6.6E-63 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDU33_05920 2ea700a18a1e0d2efb32fc5fb2d25b3a 168 SUPERFAMILY SSF55068 2 158 2.35E-63 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDU33_05920 2ea700a18a1e0d2efb32fc5fb2d25b3a 168 Pfam PF01625 Peptide methionine sulfoxide reductase 6 155 6.9E-61 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDU33_05920 2ea700a18a1e0d2efb32fc5fb2d25b3a 168 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 160 36.46 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDU33_05920 2ea700a18a1e0d2efb32fc5fb2d25b3a 168 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 154 3.2E-56 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DDU33_05840 514523698983e16da8b82529b8b0aa47 297 TIGRFAM TIGR00688 rarD: protein RarD 3 254 6.7E-58 T 14-10-2018 IPR004626 RarD protein GO:0005887 DDU33_05840 514523698983e16da8b82529b8b0aa47 297 SUPERFAMILY SSF103481 36 141 2.35E-8 T 14-10-2018 DDU33_05840 514523698983e16da8b82529b8b0aa47 297 Pfam PF00892 EamA-like transporter family 2 140 1.3E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_04200 201b3b4b425cdb716902827d57e25867 379 SUPERFAMILY SSF52540 4 251 5.16E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_04200 201b3b4b425cdb716902827d57e25867 379 Gene3D G3DSA:2.40.50.100 248 372 1.5E-44 T 14-10-2018 DDU33_04200 201b3b4b425cdb716902827d57e25867 379 SMART SM00382 28 211 2.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_04200 201b3b4b425cdb716902827d57e25867 379 Gene3D G3DSA:3.40.50.300 1 246 4.0E-71 T 14-10-2018 DDU33_04200 201b3b4b425cdb716902827d57e25867 379 Pfam PF08402 TOBE domain 291 363 1.9E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DDU33_04200 201b3b4b425cdb716902827d57e25867 379 Gene3D G3DSA:2.40.50.140 298 355 1.5E-44 T 14-10-2018 DDU33_04200 201b3b4b425cdb716902827d57e25867 379 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_04200 201b3b4b425cdb716902827d57e25867 379 SUPERFAMILY SSF50331 244 372 3.61E-33 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DDU33_04200 201b3b4b425cdb716902827d57e25867 379 Pfam PF00005 ABC transporter 21 161 3.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00055 5b90aa9dde95a62ff323d0c15d5cd926 123 Pfam PF07361 Cytochrome b562 23 123 1.1E-30 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 DDU33_00055 5b90aa9dde95a62ff323d0c15d5cd926 123 Gene3D G3DSA:1.20.120.10 21 123 1.5E-16 T 14-10-2018 DDU33_00055 5b90aa9dde95a62ff323d0c15d5cd926 123 SUPERFAMILY SSF47175 22 123 4.12E-30 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 DDU33_00055 5b90aa9dde95a62ff323d0c15d5cd926 123 PIRSF PIRSF000029 1 123 2.3E-23 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 Gene3D G3DSA:1.20.1250.20 18 238 9.7E-48 T 14-10-2018 DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 PIRSF PIRSF002808 5 479 1.8E-138 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 ProSitePatterns PS00942 glpT family of transporters signature. 154 170 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 470 1.3E-236 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 Gene3D G3DSA:1.20.1250.20 253 478 3.6E-55 T 14-10-2018 DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 Pfam PF07690 Major Facilitator Superfamily 35 429 5.5E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 SUPERFAMILY SSF103473 12 467 5.1E-72 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_03330 a34d7097689276c87bf98ba2cb2c86eb 481 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 447 1.7E-128 T 14-10-2018 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 Pfam PF00912 Transglycosylase 160 337 1.3E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 Gene3D G3DSA:3.30.2060.10 68 157 2.8E-238 T 14-10-2018 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 Pfam PF00905 Penicillin binding protein transpeptidase domain 432 673 3.1E-21 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 SUPERFAMILY SSF56601 319 731 1.63E-105 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 Gene3D G3DSA:3.40.710.10 60 722 2.8E-238 T 14-10-2018 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 SUPERFAMILY SSF53955 153 359 6.47E-67 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 Gene3D G3DSA:1.10.3810.10 158 361 2.8E-238 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 Pfam PF14814 Bifunctional transglycosylase second domain 74 154 9.6E-22 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 25 752 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01790 a22b13ddd5b2b103f26fcd0aaad897b9 801 PIRSF PIRSF002799 1 779 3.7E-299 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_00045 c776308dcab72fd198e2007753d1e94d 414 Pfam PF04932 O-Antigen ligase 184 335 5.3E-22 T 14-10-2018 IPR007016 O-antigen ligase-related DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 SMART SM00418 14 93 1.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 Gene3D G3DSA:1.10.10.10 1 97 3.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 4.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 Pfam PF01022 Bacterial regulatory protein, arsR family 21 67 2.9E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 SUPERFAMILY SSF46785 10 91 2.82E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_03030 6af871c1f98418e46df8c8a39b6c95f5 106 SMART SM00347 17 104 0.0043 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 123 289 6.4E-54 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 20 303 27.903 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 2.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 PRINTS PR01755 Bacterial translocase SecF protein signature 47 62 2.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 2.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 2.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 Gene3D G3DSA:1.20.1640.10 117 306 8.5E-6 T 14-10-2018 DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 SUPERFAMILY SSF82866 83 292 1.96E-34 T 14-10-2018 DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 Pfam PF07549 SecD/SecF GG Motif 42 69 1.3E-12 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 48 292 2.0E-83 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DDU33_06480 2ef043a002012fb362af39a9d48bd946 324 Pfam PF02355 Protein export membrane protein 120 300 9.4E-66 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DDU33_07235 9f3071d1dd17222ac27f46ed61d0f44d 318 Gene3D G3DSA:3.40.50.2300 140 310 1.9E-86 T 14-10-2018 DDU33_07235 9f3071d1dd17222ac27f46ed61d0f44d 318 SUPERFAMILY SSF53822 33 280 5.89E-18 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_07235 9f3071d1dd17222ac27f46ed61d0f44d 318 Pfam PF04392 ABC transporter substrate binding protein 27 314 4.1E-97 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein DDU33_07235 9f3071d1dd17222ac27f46ed61d0f44d 318 Gene3D G3DSA:3.40.50.2300 43 289 1.9E-86 T 14-10-2018 DDU33_03340 be0da6d556edf129be7c7feef8d43a56 428 Pfam PF00890 FAD binding domain 4 412 1.6E-68 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DDU33_03340 be0da6d556edf129be7c7feef8d43a56 428 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 424 2.9E-181 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDU33_03340 be0da6d556edf129be7c7feef8d43a56 428 PIRSF PIRSF000141 1 428 2.0E-183 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDU33_03340 be0da6d556edf129be7c7feef8d43a56 428 SUPERFAMILY SSF51905 1 424 6.1E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_03340 be0da6d556edf129be7c7feef8d43a56 428 Gene3D G3DSA:3.50.50.60 2 96 1.5E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_03340 be0da6d556edf129be7c7feef8d43a56 428 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 428 53.019 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 DDU33_07970 a13f144a8436916c3d45029a7e18fbd3 81 SUPERFAMILY SSF54285 1 81 6.92E-23 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DDU33_07970 a13f144a8436916c3d45029a7e18fbd3 81 Pfam PF02597 ThiS family 4 81 2.8E-21 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DDU33_07970 a13f144a8436916c3d45029a7e18fbd3 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 7.4E-22 T 14-10-2018 DDU33_07970 a13f144a8436916c3d45029a7e18fbd3 81 Gene3D G3DSA:3.10.20.30 1 81 1.9E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DDU33_01340 73cb39505ba9673117fcf9fad6474ef5 290 Pfam PF00535 Glycosyl transferase family 2 8 162 1.7E-12 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_01340 73cb39505ba9673117fcf9fad6474ef5 290 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 12 280 8.8E-68 T 14-10-2018 IPR006446 Rhamnosyltransferase DDU33_01340 73cb39505ba9673117fcf9fad6474ef5 290 SUPERFAMILY SSF53448 8 273 3.7E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01340 73cb39505ba9673117fcf9fad6474ef5 290 Gene3D G3DSA:3.90.550.10 2 209 3.7E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01385 5a82529bd0343004981c4b96c187e42e 292 Pfam PF00483 Nucleotidyl transferase 2 239 1.6E-74 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDU33_01385 5a82529bd0343004981c4b96c187e42e 292 Gene3D G3DSA:3.90.550.10 1 292 1.1E-88 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01385 5a82529bd0343004981c4b96c187e42e 292 SUPERFAMILY SSF53448 1 288 7.51E-93 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01385 5a82529bd0343004981c4b96c187e42e 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 289 5.0E-158 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DDU33_10485 1847178c3951f5f78941d28ea576b129 182 Pfam PF03695 Uncharacterised protein family (UPF0149) 6 169 3.5E-27 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 DDU33_10485 1847178c3951f5f78941d28ea576b129 182 Gene3D G3DSA:1.20.120.740 1 182 2.6E-45 T 14-10-2018 DDU33_10485 1847178c3951f5f78941d28ea576b129 182 SUPERFAMILY SSF101327 3 169 4.71E-43 T 14-10-2018 IPR036255 YgfB-like superfamily DDU33_10485 1847178c3951f5f78941d28ea576b129 182 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 4 165 2.2E-12 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 DDU33_00540 ed2755caa52088064bddb701ef87f5c8 108 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 4.1E-45 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related DDU33_00540 ed2755caa52088064bddb701ef87f5c8 108 Gene3D G3DSA:3.40.30.10 6 102 3.5E-30 T 14-10-2018 DDU33_00540 ed2755caa52088064bddb701ef87f5c8 108 Pfam PF00462 Glutaredoxin 16 80 1.6E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DDU33_00540 ed2755caa52088064bddb701ef87f5c8 108 PIRSF PIRSF005894 1 107 7.3E-51 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 DDU33_00540 ed2755caa52088064bddb701ef87f5c8 108 SUPERFAMILY SSF52833 1 104 6.79E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 Gene3D G3DSA:1.10.260.40 1 58 2.0E-21 T 14-10-2018 DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 SUPERFAMILY SSF47413 1 55 1.07E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 SUPERFAMILY SSF53822 61 331 1.81E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 325 1.8E-44 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 SMART SM00354 1 71 1.8E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 Gene3D G3DSA:3.40.50.2300 61 312 6.4E-45 T 14-10-2018 DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_10095 8124037e5f12df5bab12262c6a8f6e91 331 Gene3D G3DSA:3.40.50.2300 161 295 6.4E-45 T 14-10-2018 DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 SUPERFAMILY SSF51905 264 531 1.42E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 Gene3D G3DSA:3.50.50.60 264 660 2.3E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 Gene3D G3DSA:3.40.50.150 7 249 8.6E-90 T 14-10-2018 DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 Pfam PF01266 FAD dependent oxidoreductase 264 634 3.8E-43 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 264 663 2.5E-137 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 658 24.391 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 240 8.0E-42 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 DDU33_07230 df76d5f8bbca369eefbf733f4c08b4c7 667 Gene3D G3DSA:3.30.9.10 348 568 2.3E-124 T 14-10-2018 DDU33_01635 3c6d2d18601db85ed28b967e3e684fb8 158 Gene3D G3DSA:3.30.300.20 1 151 2.8E-44 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DDU33_01635 3c6d2d18601db85ed28b967e3e684fb8 158 Pfam PF02566 OsmC-like protein 50 150 6.1E-13 T 14-10-2018 IPR003718 OsmC/Ohr family DDU33_01635 3c6d2d18601db85ed28b967e3e684fb8 158 SUPERFAMILY SSF82784 3 150 7.46E-39 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DDU33_03475 b6b0c12c9d61822bf9a4b6df71294a51 383 Gene3D G3DSA:3.40.50.1970 1 185 6.4E-56 T 14-10-2018 DDU33_03475 b6b0c12c9d61822bf9a4b6df71294a51 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDU33_03475 b6b0c12c9d61822bf9a4b6df71294a51 383 Gene3D G3DSA:1.20.1090.10 187 383 6.1E-70 T 14-10-2018 DDU33_03475 b6b0c12c9d61822bf9a4b6df71294a51 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 375 1.8E-121 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DDU33_03475 b6b0c12c9d61822bf9a4b6df71294a51 383 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 379 1.1E-201 T 14-10-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 DDU33_03475 b6b0c12c9d61822bf9a4b6df71294a51 383 SUPERFAMILY SSF56796 10 380 4.71E-124 T 14-10-2018 DDU33_03475 b6b0c12c9d61822bf9a4b6df71294a51 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DDU33_05380 40d489fd111cf871e493756f67de4765 322 Gene3D G3DSA:3.20.20.70 6 249 3.2E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_05380 40d489fd111cf871e493756f67de4765 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_05380 40d489fd111cf871e493756f67de4765 322 Gene3D G3DSA:1.10.1200.80 250 320 5.2E-7 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DDU33_05380 40d489fd111cf871e493756f67de4765 322 SUPERFAMILY SSF51395 11 318 9.16E-91 T 14-10-2018 DDU33_05380 40d489fd111cf871e493756f67de4765 322 Pfam PF01207 Dihydrouridine synthase (Dus) 14 315 7.4E-109 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_05380 40d489fd111cf871e493756f67de4765 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 320 47.54 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 DDU33_05380 40d489fd111cf871e493756f67de4765 322 PIRSF PIRSF006621 1 321 4.4E-104 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_05380 40d489fd111cf871e493756f67de4765 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 1.6E-134 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DDU33_08460 54b86ee2838108f2917b32cd0fb1c926 361 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 355 7.1E-166 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDU33_08460 54b86ee2838108f2917b32cd0fb1c926 361 Pfam PF00793 DAHP synthetase I family 41 342 4.1E-102 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DDU33_08460 54b86ee2838108f2917b32cd0fb1c926 361 SUPERFAMILY SSF51569 7 354 5.23E-130 T 14-10-2018 DDU33_08460 54b86ee2838108f2917b32cd0fb1c926 361 Gene3D G3DSA:3.20.20.70 1 356 9.8E-158 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_08460 54b86ee2838108f2917b32cd0fb1c926 361 PIRSF PIRSF001361 1 358 6.9E-155 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DDU33_08215 a022dd70818d7bf60c5adaf98c65cd18 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 31.668 T 14-10-2018 IPR033747 Class I PurE DDU33_08215 a022dd70818d7bf60c5adaf98c65cd18 164 Gene3D G3DSA:3.40.50.7700 1 164 8.4E-74 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DDU33_08215 a022dd70818d7bf60c5adaf98c65cd18 164 Pfam PF00731 AIR carboxylase 6 152 2.5E-63 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDU33_08215 a022dd70818d7bf60c5adaf98c65cd18 164 SMART SM01001 4 155 9.5E-100 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDU33_08215 a022dd70818d7bf60c5adaf98c65cd18 164 SUPERFAMILY SSF52255 5 161 1.1E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DDU33_08215 a022dd70818d7bf60c5adaf98c65cd18 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 160 8.7E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DDU33_08215 a022dd70818d7bf60c5adaf98c65cd18 164 PIRSF PIRSF001338 1 163 5.2E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 3.5E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.5E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 3.5E-24 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.968 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 SUPERFAMILY SSF143800 1 66 1.26E-29 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 Gene3D G3DSA:2.30.170.50 1 70 2.4E-34 T 14-10-2018 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 2.6E-36 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_06645 2412c9e487cf157a58f533012e1f7907 70 Pfam PF01197 Ribosomal protein L31 1 64 1.7E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_05280 05da661c620a28e54802b8482da625e3 270 Hamap MF_01974 Methionine aminopeptidase [map]. 5 253 41.702 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDU33_05280 05da661c620a28e54802b8482da625e3 270 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 9.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDU33_05280 05da661c620a28e54802b8482da625e3 270 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 9.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDU33_05280 05da661c620a28e54802b8482da625e3 270 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 9.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDU33_05280 05da661c620a28e54802b8482da625e3 270 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 9.0E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDU33_05280 05da661c620a28e54802b8482da625e3 270 Gene3D G3DSA:3.90.230.10 5 264 2.4E-105 T 14-10-2018 DDU33_05280 05da661c620a28e54802b8482da625e3 270 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 251 1.4E-101 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDU33_05280 05da661c620a28e54802b8482da625e3 270 Pfam PF00557 Metallopeptidase family M24 14 244 4.7E-50 T 14-10-2018 IPR000994 Peptidase M24 DDU33_05280 05da661c620a28e54802b8482da625e3 270 SUPERFAMILY SSF55920 8 257 2.49E-85 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DDU33_05280 05da661c620a28e54802b8482da625e3 270 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DDU33_06265 6554fa84faedede2aac51b830312dec4 291 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 246 272 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 DDU33_06265 6554fa84faedede2aac51b830312dec4 291 Pfam PF01148 Cytidylyltransferase family 3 286 1.7E-66 T 14-10-2018 DDU33_02895 caed2d336789feaa6d3e7de387f900f2 143 Pfam PF12802 MarR family 39 84 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_02895 caed2d336789feaa6d3e7de387f900f2 143 SUPERFAMILY SSF46785 4 135 3.13E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_02895 caed2d336789feaa6d3e7de387f900f2 143 Gene3D G3DSA:1.10.10.10 1 137 8.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_02895 caed2d336789feaa6d3e7de387f900f2 143 SMART SM00347 20 121 8.3E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_07125 037609cf6cbd671e51cc364829114b0c 318 Gene3D G3DSA:2.50.20.10 26 207 4.6E-46 T 14-10-2018 DDU33_07125 037609cf6cbd671e51cc364829114b0c 318 PIRSF PIRSF005427 1 318 3.1E-68 T 14-10-2018 IPR005588 MucB/RseB DDU33_07125 037609cf6cbd671e51cc364829114b0c 318 Pfam PF03888 MucB/RseB N-terminal domain 26 198 1.2E-52 T 14-10-2018 IPR033434 MucB/RseB, N-terminal DDU33_07125 037609cf6cbd671e51cc364829114b0c 318 Pfam PF17188 MucB/RseB C-terminal domain 219 316 1.9E-20 T 14-10-2018 IPR033436 MucB/RseB, C-terminal DDU33_07125 037609cf6cbd671e51cc364829114b0c 318 Gene3D G3DSA:3.30.200.100 219 318 2.2E-22 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily DDU33_00210 707a93ad5f4ae080065fe67f7eded0ff 425 TIGRFAM TIGR00901 2A0125: AmpG-like permease 29 378 8.6E-113 T 14-10-2018 DDU33_00210 707a93ad5f4ae080065fe67f7eded0ff 425 Gene3D G3DSA:1.20.1250.20 54 418 6.3E-19 T 14-10-2018 DDU33_00210 707a93ad5f4ae080065fe67f7eded0ff 425 SUPERFAMILY SSF103473 6 421 1.44E-28 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_00210 707a93ad5f4ae080065fe67f7eded0ff 425 Pfam PF07690 Major Facilitator Superfamily 66 375 4.1E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_09080 6e63bc24a94095a804a9a1c915a18222 768 SMART SM00849 514 703 0.004 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_09080 6e63bc24a94095a804a9a1c915a18222 768 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 213 409 2.0E-33 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DDU33_09080 6e63bc24a94095a804a9a1c915a18222 768 Gene3D G3DSA:3.60.15.10 506 747 8.9E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_09080 6e63bc24a94095a804a9a1c915a18222 768 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 67 732 1.1E-152 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 DDU33_09080 6e63bc24a94095a804a9a1c915a18222 768 SUPERFAMILY SSF56281 502 748 4.5E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_09080 6e63bc24a94095a804a9a1c915a18222 768 Pfam PF03772 Competence protein 192 468 1.4E-48 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DDU33_09080 6e63bc24a94095a804a9a1c915a18222 768 Pfam PF00753 Metallo-beta-lactamase superfamily 525 589 9.4E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_07375 6b96a5d9c8b2caba3730b9268f0b0516 292 Pfam PF00480 ROK family 4 287 5.7E-79 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DDU33_07375 6b96a5d9c8b2caba3730b9268f0b0516 292 Gene3D G3DSA:3.30.420.40 118 270 2.6E-80 T 14-10-2018 DDU33_07375 6b96a5d9c8b2caba3730b9268f0b0516 292 SUPERFAMILY SSF53067 1 287 3.84E-53 T 14-10-2018 DDU33_07375 6b96a5d9c8b2caba3730b9268f0b0516 292 Gene3D G3DSA:3.30.420.40 6 283 2.6E-80 T 14-10-2018 DDU33_03370 595ba8d0a873912bc824a95dae4a2556 163 Gene3D G3DSA:1.20.120.520 7 162 6.4E-30 T 14-10-2018 DDU33_03370 595ba8d0a873912bc824a95dae4a2556 163 Pfam PF01814 Hemerythrin HHE cation binding domain 23 157 8.6E-28 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DDU33_08335 2ef3ee942931cc7f11fa0694ab2adfcb 821 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 20 814 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_08335 2ef3ee942931cc7f11fa0694ab2adfcb 821 SUPERFAMILY SSF53756 16 818 0.0 T 14-10-2018 DDU33_08335 2ef3ee942931cc7f11fa0694ab2adfcb 821 Gene3D G3DSA:3.40.50.2000 34 816 0.0 T 14-10-2018 DDU33_08335 2ef3ee942931cc7f11fa0694ab2adfcb 821 Gene3D G3DSA:3.40.50.2000 473 799 0.0 T 14-10-2018 DDU33_08335 2ef3ee942931cc7f11fa0694ab2adfcb 821 PIRSF PIRSF000460 10 821 6.1E-232 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_08335 2ef3ee942931cc7f11fa0694ab2adfcb 821 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 659 671 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_08335 2ef3ee942931cc7f11fa0694ab2adfcb 821 Pfam PF00343 Carbohydrate phosphorylase 107 814 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_06315 3422dca3c0b8003e7dc000c8f4e06699 274 SUPERFAMILY SSF53474 6 269 9.53E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_06315 3422dca3c0b8003e7dc000c8f4e06699 274 Gene3D G3DSA:3.40.50.1820 7 273 4.6E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_06315 3422dca3c0b8003e7dc000c8f4e06699 274 Pfam PF00756 Putative esterase 21 208 1.5E-25 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DDU33_00365 f9382cdf096048cc2d68b82cc0c504cb 576 Gene3D G3DSA:3.40.50.2300 363 564 8.4E-75 T 14-10-2018 DDU33_00365 f9382cdf096048cc2d68b82cc0c504cb 576 Gene3D G3DSA:1.25.40.10 22 151 7.5E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_00365 f9382cdf096048cc2d68b82cc0c504cb 576 Gene3D G3DSA:1.25.40.650 154 262 3.0E-26 T 14-10-2018 DDU33_00365 f9382cdf096048cc2d68b82cc0c504cb 576 Pfam PF04348 LppC putative lipoprotein 37 570 5.9E-160 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA DDU33_00365 f9382cdf096048cc2d68b82cc0c504cb 576 SUPERFAMILY SSF53822 262 572 4.32E-74 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_00365 f9382cdf096048cc2d68b82cc0c504cb 576 Gene3D G3DSA:3.40.50.2300 264 563 8.4E-75 T 14-10-2018 DDU33_10405 5bd94cd1dc560c444b52cfc1cb8dbf23 466 Gene3D G3DSA:1.25.40.10 56 186 2.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10405 5bd94cd1dc560c444b52cfc1cb8dbf23 466 Pfam PF04575 Protein of unknown function (DUF560) 178 466 9.1E-95 T 14-10-2018 IPR007655 Protein of unknown function DUF560 DDU33_10405 5bd94cd1dc560c444b52cfc1cb8dbf23 466 SUPERFAMILY SSF48452 88 152 4.56E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_04615 0f47694c5283ba8e1e156b3d6c5460c0 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 80 6.0E-19 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 DDU33_04615 0f47694c5283ba8e1e156b3d6c5460c0 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 33.585 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 DDU33_04615 0f47694c5283ba8e1e156b3d6c5460c0 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 82 1.3E-19 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 DDU33_10535 0030c60f20dce00beea1dc33a3b45c58 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.5E-86 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 DDU33_10535 0030c60f20dce00beea1dc33a3b45c58 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.3E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_10535 0030c60f20dce00beea1dc33a3b45c58 193 PIRSF PIRSF006102 1 193 2.7E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DDU33_10535 0030c60f20dce00beea1dc33a3b45c58 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.712 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 DDU33_00025 fb33e23a3e61f4800112bd312ec1f9c6 161 Gene3D G3DSA:3.40.50.300 1 157 1.9E-47 T 14-10-2018 DDU33_00025 fb33e23a3e61f4800112bd312ec1f9c6 161 SUPERFAMILY SSF52540 33 140 1.06E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00025 fb33e23a3e61f4800112bd312ec1f9c6 161 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 145 2.3E-48 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DDU33_00025 fb33e23a3e61f4800112bd312ec1f9c6 161 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 135 2.6E-39 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DDU33_08435 da8f5f6a0ae3dd905da480083e7eed9b 640 SMART SM00382 32 219 4.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08435 da8f5f6a0ae3dd905da480083e7eed9b 640 Gene3D G3DSA:3.40.50.300 1 262 1.8E-66 T 14-10-2018 DDU33_08435 da8f5f6a0ae3dd905da480083e7eed9b 640 Pfam PF12704 MacB-like periplasmic core domain 268 483 2.2E-35 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DDU33_08435 da8f5f6a0ae3dd905da480083e7eed9b 640 SUPERFAMILY SSF52540 3 226 1.6E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08435 da8f5f6a0ae3dd905da480083e7eed9b 640 Pfam PF02687 FtsX-like permease family 545 633 3.0E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDU33_08435 da8f5f6a0ae3dd905da480083e7eed9b 640 Pfam PF00005 ABC transporter 23 171 7.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_08435 da8f5f6a0ae3dd905da480083e7eed9b 640 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_07100 d579b49f66d2d99b24ec38c1c0cec11b 1357 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1009 1356 6.0E-68 T 14-10-2018 IPR007452 Translocation and assembly module TamB DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 SUPERFAMILY SSF55326 6 169 1.79E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 338 4.5E-38 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 SUPERFAMILY SSF56042 170 339 1.64E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 Gene3D G3DSA:3.90.650.10 170 344 3.4E-71 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 332 5.4E-153 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 163 7.1E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 Gene3D G3DSA:3.30.1330.10 5 169 7.9E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DDU33_05495 e3e9f81fad6f7a0073783ce1c3c60aae 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 6 343 47.437 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DDU33_07155 8f9a9a744fb1f5af38b17198e8d9613d 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 12 314 50.301 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 DDU33_07155 8f9a9a744fb1f5af38b17198e8d9613d 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_07155 8f9a9a744fb1f5af38b17198e8d9613d 319 PIRSF PIRSF006621 1 318 1.3E-74 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_07155 8f9a9a744fb1f5af38b17198e8d9613d 319 Gene3D G3DSA:1.20.225.30 247 317 5.0E-21 T 14-10-2018 DDU33_07155 8f9a9a744fb1f5af38b17198e8d9613d 319 SUPERFAMILY SSF51395 5 316 2.75E-69 T 14-10-2018 DDU33_07155 8f9a9a744fb1f5af38b17198e8d9613d 319 Gene3D G3DSA:3.20.20.70 4 246 7.9E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_07155 8f9a9a744fb1f5af38b17198e8d9613d 319 Pfam PF01207 Dihydrouridine synthase (Dus) 8 283 6.4E-82 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DDU33_01255 7f0efc002d83b775f3e5ec7520b9fa10 277 Gene3D G3DSA:3.90.550.10 4 252 1.5E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01255 7f0efc002d83b775f3e5ec7520b9fa10 277 Pfam PF01501 Glycosyl transferase family 8 5 236 2.4E-29 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 DDU33_01255 7f0efc002d83b775f3e5ec7520b9fa10 277 SUPERFAMILY SSF53448 4 266 1.13E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_05390 8c5ab3cd8525955b780bc1bb8276f4ec 823 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 146 1.5E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_05390 8c5ab3cd8525955b780bc1bb8276f4ec 823 SUPERFAMILY SSF56935 58 823 3.67E-69 T 14-10-2018 DDU33_05390 8c5ab3cd8525955b780bc1bb8276f4ec 823 Gene3D G3DSA:2.170.130.10 43 156 6.3E-22 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_05390 8c5ab3cd8525955b780bc1bb8276f4ec 823 Pfam PF00593 TonB dependent receptor 362 822 1.5E-32 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DDU33_03915 e8d35fad02643a15f742dd89a55643f7 330 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 143 151 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 DDU33_03915 e8d35fad02643a15f742dd89a55643f7 330 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 16 324 1.9E-126 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 DDU33_03915 e8d35fad02643a15f742dd89a55643f7 330 Pfam PF13531 Bacterial extracellular solute-binding protein 33 277 3.6E-46 T 14-10-2018 DDU33_03915 e8d35fad02643a15f742dd89a55643f7 330 Gene3D G3DSA:3.40.190.10 111 323 3.5E-125 T 14-10-2018 DDU33_03915 e8d35fad02643a15f742dd89a55643f7 330 Gene3D G3DSA:3.40.190.10 23 292 3.5E-125 T 14-10-2018 DDU33_03915 e8d35fad02643a15f742dd89a55643f7 330 SUPERFAMILY SSF53850 16 324 1.61E-78 T 14-10-2018 DDU33_06915 d60c6ba0711121010858b6997d8dfbde 323 Pfam PF13378 Enolase C-terminal domain-like 129 271 1.8E-12 T 14-10-2018 IPR029065 Enolase C-terminal domain-like DDU33_06915 d60c6ba0711121010858b6997d8dfbde 323 Gene3D G3DSA:3.20.20.120 98 293 3.7E-105 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DDU33_06915 d60c6ba0711121010858b6997d8dfbde 323 Gene3D G3DSA:3.30.390.10 7 300 3.7E-105 T 14-10-2018 IPR029017 Enolase-like, N-terminal DDU33_06915 d60c6ba0711121010858b6997d8dfbde 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 10 305 1.6E-87 T 14-10-2018 DDU33_06915 d60c6ba0711121010858b6997d8dfbde 323 SUPERFAMILY SSF51604 119 302 1.83E-42 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DDU33_06915 d60c6ba0711121010858b6997d8dfbde 323 SMART SM00922 112 208 9.5E-9 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DDU33_06915 d60c6ba0711121010858b6997d8dfbde 323 SUPERFAMILY SSF54826 7 98 4.32E-23 T 14-10-2018 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 Pfam PF13365 Trypsin-like peptidase domain 75 209 1.0E-28 T 14-10-2018 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 Gene3D G3DSA:2.40.10.10 26 135 4.7E-28 T 14-10-2018 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 SMART SM00228 260 338 9.7E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 SUPERFAMILY SSF50156 241 345 9.07E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 Gene3D G3DSA:2.40.10.10 136 259 9.9E-38 T 14-10-2018 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 PRINTS PR00834 HtrA/DegQ protease family signature 105 125 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 PRINTS PR00834 HtrA/DegQ protease family signature 180 197 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 PRINTS PR00834 HtrA/DegQ protease family signature 84 96 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 PRINTS PR00834 HtrA/DegQ protease family signature 145 169 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 PRINTS PR00834 HtrA/DegQ protease family signature 202 219 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.8E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 Pfam PF13180 PDZ domain 278 345 1.3E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 SUPERFAMILY SSF50494 41 257 1.08E-57 T 14-10-2018 IPR009003 Peptidase S1, PA clan DDU33_07570 d075b7466cd946d757d3450132d9c66e 358 Gene3D G3DSA:2.30.42.10 260 355 4.2E-19 T 14-10-2018 DDU33_05435 a33b29fcd6df25aac3d3932317a7d5a5 208 Gene3D G3DSA:1.25.40.10 94 208 8.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_05435 a33b29fcd6df25aac3d3932317a7d5a5 208 Pfam PF09976 Tetratricopeptide repeat-like domain 18 208 7.3E-41 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 DDU33_05435 a33b29fcd6df25aac3d3932317a7d5a5 208 SUPERFAMILY SSF48452 100 195 1.17E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_05435 a33b29fcd6df25aac3d3932317a7d5a5 208 PIRSF PIRSF006170 5 208 2.8E-47 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 DDU33_07410 050950b3bcb704157ffe639e420a666a 308 Gene3D G3DSA:1.25.40.10 31 300 2.4E-78 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_07410 050950b3bcb704157ffe639e420a666a 308 Pfam PF13181 Tetratricopeptide repeat 107 138 0.12 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_07410 050950b3bcb704157ffe639e420a666a 308 PIRSF PIRSF004654 1 301 2.6E-109 T 14-10-2018 IPR023605 Lipoprotein NlpI DDU33_07410 050950b3bcb704157ffe639e420a666a 308 SUPERFAMILY SSF48452 45 293 2.06E-62 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_07410 050950b3bcb704157ffe639e420a666a 308 SMART SM00028 139 172 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_07410 050950b3bcb704157ffe639e420a666a 308 SMART SM00028 244 277 27.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_07410 050950b3bcb704157ffe639e420a666a 308 SMART SM00028 105 138 2.4E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_07410 050950b3bcb704157ffe639e420a666a 308 SMART SM00028 71 104 0.0039 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_05245 10c1ec45bd7a3d9d7ac35ceb36273b2d 135 SUPERFAMILY SSF102220 27 130 4.45E-16 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_05245 10c1ec45bd7a3d9d7ac35ceb36273b2d 135 Pfam PF03603 DNA polymerase III psi subunit 1 127 1.5E-30 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_05245 10c1ec45bd7a3d9d7ac35ceb36273b2d 135 PIRSF PIRSF029225 1 133 7.8E-32 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_05245 10c1ec45bd7a3d9d7ac35ceb36273b2d 135 Gene3D G3DSA:3.40.50.10220 32 133 2.6E-10 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DDU33_06615 ac43d3979a0716c2c6af1e175a788d50 85 Gene3D G3DSA:2.40.160.50 1 84 1.7E-6 T 14-10-2018 DDU33_01160 9cfb67d9cb36a3ba0eb45fd547294ea1 105 SUPERFAMILY SSF47598 2 105 6.0E-57 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DDU33_01160 9cfb67d9cb36a3ba0eb45fd547294ea1 105 Hamap MF_00744 Met repressor [metJ]. 1 105 37.615 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 DDU33_01160 9cfb67d9cb36a3ba0eb45fd547294ea1 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-46 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 DDU33_01160 9cfb67d9cb36a3ba0eb45fd547294ea1 105 Gene3D G3DSA:1.10.140.10 2 105 2.5E-60 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily DDU33_01160 9cfb67d9cb36a3ba0eb45fd547294ea1 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.1E-55 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 DDU33_08575 6361fef291687c75b42486cc76a0110f 487 Pfam PF00772 DnaB-like helicase N terminal domain 23 124 4.1E-36 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DDU33_08575 6361fef291687c75b42486cc76a0110f 487 SMART SM00382 220 444 0.0096 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08575 6361fef291687c75b42486cc76a0110f 487 SUPERFAMILY SSF52540 201 470 2.09E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08575 6361fef291687c75b42486cc76a0110f 487 Gene3D G3DSA:1.10.860.10 15 180 2.1E-54 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DDU33_08575 6361fef291687c75b42486cc76a0110f 487 Gene3D G3DSA:3.40.50.300 181 480 2.2E-102 T 14-10-2018 DDU33_08575 6361fef291687c75b42486cc76a0110f 487 Pfam PF03796 DnaB-like helicase C terminal domain 203 477 1.1E-107 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DDU33_08575 6361fef291687c75b42486cc76a0110f 487 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 478 4.4E-169 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DDU33_08575 6361fef291687c75b42486cc76a0110f 487 SUPERFAMILY SSF48024 22 132 1.16E-37 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 19 129 1.2E-47 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 SUPERFAMILY SSF55620 183 263 7.41E-10 T 14-10-2018 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 TIGRFAM TIGR03138 QueF: queuine synthase 8 279 2.9E-123 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 Gene3D G3DSA:3.30.1130.10 142 279 2.4E-59 T 14-10-2018 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 PIRSF PIRSF004750 4 279 3.1E-127 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 Pfam PF14489 QueF-like protein 193 266 1.9E-26 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 279 158.415 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DDU33_07210 64fea5d6a17fbe3fe43433e64c1abb25 279 Gene3D G3DSA:3.30.1130.10 19 137 2.8E-44 T 14-10-2018 DDU33_10600 d22b212a16a8f8b65b34bf0e7335b8bd 144 Pfam PF05656 Protein of unknown function (DUF805) 8 131 4.7E-16 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 DDU33_05985 d71c264e2104834ee6468d1571dd5a55 439 SUPERFAMILY SSF103473 7 437 5.36E-61 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_05985 d71c264e2104834ee6468d1571dd5a55 439 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 20 422 1.2E-147 T 14-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 DDU33_05985 d71c264e2104834ee6468d1571dd5a55 439 Pfam PF00083 Sugar (and other) transporter 14 438 8.3E-32 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DDU33_05985 d71c264e2104834ee6468d1571dd5a55 439 Gene3D G3DSA:1.20.1250.20 11 439 1.1E-66 T 14-10-2018 DDU33_05985 d71c264e2104834ee6468d1571dd5a55 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 322 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDU33_05145 2e78228c1c76ab5447c4c6b049d53901 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 10 19 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DDU33_05145 2e78228c1c76ab5447c4c6b049d53901 188 Pfam PF01184 GPR1/FUN34/yaaH family 7 176 2.1E-44 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DDU33_02265 ae485caadd9a9cb3688ad8506ccbfb9c 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 227 2.2E-79 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DDU33_02265 ae485caadd9a9cb3688ad8506ccbfb9c 237 Pfam PF03749 Sugar fermentation stimulation protein 12 221 4.0E-75 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DDU33_02265 ae485caadd9a9cb3688ad8506ccbfb9c 237 Gene3D G3DSA:2.40.50.580 2 79 2.2E-28 T 14-10-2018 DDU33_02265 ae485caadd9a9cb3688ad8506ccbfb9c 237 Gene3D G3DSA:3.40.1350.60 80 233 3.5E-52 T 14-10-2018 DDU33_02265 ae485caadd9a9cb3688ad8506ccbfb9c 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 229 53.857 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 171 1.4E-53 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 SUPERFAMILY SSF48179 179 474 9.72E-127 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 SMART SM01350 181 471 1.6E-211 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 Gene3D G3DSA:3.40.50.720 2 182 4.8E-60 T 14-10-2018 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 255 267 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 170 198 1.8E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 5 28 1.8E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 358 380 1.8E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 251 278 1.8E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 121 146 1.8E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 1.8E-83 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 PIRSF PIRSF000109 1 479 1.2E-248 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 SUPERFAMILY SSF51735 6 176 8.66E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 181 470 4.9E-124 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 6 471 6.1E-239 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 Gene3D G3DSA:1.20.5.320 438 484 1.1E-24 T 14-10-2018 DDU33_00590 3d2f74bdc78d42397b9021b6f30843e7 484 Gene3D G3DSA:1.10.1040.10 183 436 7.1E-101 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DDU33_00160 be9d4e4e1ca5c6e65bedb68b8671994d 166 Gene3D G3DSA:1.10.10.10 14 59 1.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_00160 be9d4e4e1ca5c6e65bedb68b8671994d 166 Gene3D G3DSA:1.10.10.10 111 156 6.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_00160 be9d4e4e1ca5c6e65bedb68b8671994d 166 Pfam PF02631 RecX family 37 156 5.2E-30 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DDU33_00160 be9d4e4e1ca5c6e65bedb68b8671994d 166 Hamap MF_01114 Regulatory protein RecX [recX]. 1 161 14.882 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DDU33_00160 be9d4e4e1ca5c6e65bedb68b8671994d 166 Gene3D G3DSA:1.10.10.10 62 105 8.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_09070 5d2c5af42ec850aad73f8d3e67972885 363 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 350 1.3E-159 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDU33_09070 5d2c5af42ec850aad73f8d3e67972885 363 Gene3D G3DSA:2.40.10.240 64 168 4.4E-117 T 14-10-2018 DDU33_09070 5d2c5af42ec850aad73f8d3e67972885 363 Gene3D G3DSA:3.40.1780.10 14 350 4.4E-117 T 14-10-2018 DDU33_09070 5d2c5af42ec850aad73f8d3e67972885 363 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 351 46.569 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDU33_09070 5d2c5af42ec850aad73f8d3e67972885 363 SUPERFAMILY SSF111337 1 350 1.44E-136 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDU33_09070 5d2c5af42ec850aad73f8d3e67972885 363 Pfam PF02547 Queuosine biosynthesis protein 3 350 9.1E-132 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DDU33_05845 bd340f1724e2f29079926b8f1dc9e482 292 SUPERFAMILY SSF103481 61 144 7.32E-10 T 14-10-2018 DDU33_05845 bd340f1724e2f29079926b8f1dc9e482 292 TIGRFAM TIGR00688 rarD: protein RarD 3 253 2.7E-58 T 14-10-2018 IPR004626 RarD protein GO:0005887 DDU33_05845 bd340f1724e2f29079926b8f1dc9e482 292 Pfam PF00892 EamA-like transporter family 3 141 5.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_09435 c615c8716a25a0691119bbdfb5add737 493 Gene3D G3DSA:2.40.160.60 223 493 1.0E-70 T 14-10-2018 DDU33_09435 c615c8716a25a0691119bbdfb5add737 493 Gene3D G3DSA:2.40.160.60 23 219 3.1E-52 T 14-10-2018 DDU33_09435 c615c8716a25a0691119bbdfb5add737 493 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 493 6.9E-118 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DDU33_09435 c615c8716a25a0691119bbdfb5add737 493 SUPERFAMILY SSF56935 23 493 2.06E-92 T 14-10-2018 DDU33_04685 e0fe36b70c4437850e4945dc9dd4db8e 180 Gene3D G3DSA:2.40.50.140 30 144 3.1E-41 T 14-10-2018 DDU33_04685 e0fe36b70c4437850e4945dc9dd4db8e 180 SUPERFAMILY SSF82093 30 143 3.53E-39 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 DDU33_04685 e0fe36b70c4437850e4945dc9dd4db8e 180 Pfam PF03100 CcmE 4 138 5.3E-46 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 DDU33_04685 e0fe36b70c4437850e4945dc9dd4db8e 180 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 148 32.422 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 DDU33_02470 67a49c1563241d91a52c85cbd6153f44 347 Pfam PF07804 HipA-like C-terminal domain 56 293 3.0E-44 T 14-10-2018 IPR012893 HipA-like, C-terminal DDU33_02470 67a49c1563241d91a52c85cbd6153f44 347 Gene3D G3DSA:1.10.1070.20 158 347 4.8E-6 T 14-10-2018 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 Gene3D G3DSA:3.20.20.70 267 464 3.7E-169 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 Gene3D G3DSA:3.20.20.70 12 266 3.7E-169 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 262 2.2E-91 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 SUPERFAMILY SSF51366 16 265 9.54E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 57 75 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 266 470 27.917 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 268 464 5.5E-53 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 265 33.675 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DDU33_09085 c534f86c69e65167fdf3c067e15d42e6 470 SUPERFAMILY SSF51366 268 465 1.73E-48 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_03895 436486bd25dcf20ef8aff9d8496d3d00 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 321 2.6E-76 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DDU33_03895 436486bd25dcf20ef8aff9d8496d3d00 345 Gene3D G3DSA:3.40.50.2000 164 344 2.1E-58 T 14-10-2018 DDU33_03895 436486bd25dcf20ef8aff9d8496d3d00 345 Gene3D G3DSA:3.40.50.2000 2 149 1.5E-53 T 14-10-2018 DDU33_03895 436486bd25dcf20ef8aff9d8496d3d00 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 7.8E-150 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 DDU33_03895 436486bd25dcf20ef8aff9d8496d3d00 345 SUPERFAMILY SSF53756 1 341 4.39E-92 T 14-10-2018 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 PIRSF PIRSF000190 1 209 2.2E-77 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 169 209 1.3E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 209 4.6E-92 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 209 37.927 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 SUPERFAMILY SSF50475 6 209 3.57E-64 T 14-10-2018 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 116 7.9E-22 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 179 192 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DDU33_01070 cb7d578738326667f6301dfb1dbf0b2f 209 Gene3D G3DSA:2.30.110.10 2 209 2.5E-79 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DDU33_02460 ea9703fc2d3894fc14eb0f7fa7ad7f71 102 Pfam PF01381 Helix-turn-helix 50 100 1.2E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_02460 ea9703fc2d3894fc14eb0f7fa7ad7f71 102 Gene3D G3DSA:1.10.260.40 29 102 5.7E-6 T 14-10-2018 DDU33_02460 ea9703fc2d3894fc14eb0f7fa7ad7f71 102 SUPERFAMILY SSF47413 38 100 6.26E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_02460 ea9703fc2d3894fc14eb0f7fa7ad7f71 102 SMART SM00530 47 102 5.8E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_00015 f5f81b57b977c89b7e44bb4c69f80851 184 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 182 34.231 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 DDU33_00015 f5f81b57b977c89b7e44bb4c69f80851 184 SUPERFAMILY SSF55821 2 181 4.27E-46 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DDU33_00015 f5f81b57b977c89b7e44bb4c69f80851 184 Pfam PF01300 Telomere recombination 11 184 2.6E-35 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DDU33_00015 f5f81b57b977c89b7e44bb4c69f80851 184 Gene3D G3DSA:3.90.870.10 1 182 1.1E-50 T 14-10-2018 DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 Pfam PF00082 Subtilase family 316 595 6.5E-20 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 SUPERFAMILY SSF52743 294 612 5.89E-37 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 651 678 7.9E-9 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 541 551 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 SUPERFAMILY SSF103515 882 1184 6.28E-29 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 SUPERFAMILY SSF51126 632 796 3.14E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 Gene3D G3DSA:2.40.128.130 895 1184 6.7E-27 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 Pfam PF12951 Passenger-associated-transport-repeat 651 678 1.2E-7 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 Pfam PF03797 Autotransporter beta-domain 931 1162 4.3E-19 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 SMART SM00869 916 1173 2.0E-13 T 14-10-2018 IPR005546 Autotransporter beta-domain DDU33_08295 153bbf5754aa7211448591f358bc24be 1184 Gene3D G3DSA:3.40.50.200 297 605 6.1E-34 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DDU33_01915 fa8493d4e7d4f8e9e5378d2a6603b012 232 SUPERFAMILY SSF52833 43 229 7.64E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_01915 fa8493d4e7d4f8e9e5378d2a6603b012 232 Gene3D G3DSA:3.40.30.10 42 228 2.4E-16 T 14-10-2018 DDU33_00240 124cbdfd4a1c9aa7ae320d0f03730f08 255 Pfam PF00445 Ribonuclease T2 family 88 204 4.7E-14 T 14-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDU33_00240 124cbdfd4a1c9aa7ae320d0f03730f08 255 SUPERFAMILY SSF55895 85 253 1.7E-30 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDU33_00240 124cbdfd4a1c9aa7ae320d0f03730f08 255 Gene3D G3DSA:3.90.730.10 77 222 8.6E-23 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDU33_00240 124cbdfd4a1c9aa7ae320d0f03730f08 255 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 173 184 - T 14-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 DDU33_00240 124cbdfd4a1c9aa7ae320d0f03730f08 255 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 127 134 - T 14-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DDU33_02040 cffea234a41543d6720f32b6cec53884 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 175 24.239 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DDU33_02040 cffea234a41543d6720f32b6cec53884 175 Gene3D G3DSA:2.30.30.240 94 175 5.7E-36 T 14-10-2018 DDU33_02040 cffea234a41543d6720f32b6cec53884 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 175 7.7E-56 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DDU33_02040 cffea234a41543d6720f32b6cec53884 175 SUPERFAMILY SSF50447 8 92 3.88E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DDU33_02040 cffea234a41543d6720f32b6cec53884 175 SUPERFAMILY SSF50346 99 175 9.42E-22 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DDU33_02040 cffea234a41543d6720f32b6cec53884 175 Gene3D G3DSA:2.40.30.60 1 93 2.9E-29 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DDU33_02040 cffea234a41543d6720f32b6cec53884 175 Pfam PF05239 PRC-barrel domain 97 170 1.4E-9 T 14-10-2018 IPR027275 PRC-barrel domain DDU33_02040 cffea234a41543d6720f32b6cec53884 175 Pfam PF01782 RimM N-terminal domain 8 87 1.1E-24 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 DDU33_08105 5cab3ee701932ac6dcb96b14fbb500f5 378 Pfam PF12760 Transposase zinc-ribbon domain 23 72 4.5E-16 T 14-10-2018 IPR024442 Transposase, zinc-ribbon DDU33_08105 5cab3ee701932ac6dcb96b14fbb500f5 378 Pfam PF12762 ISXO2-like transposase domain 141 307 2.6E-49 T 14-10-2018 IPR024445 ISXO2-like transposase domain DDU33_08105 5cab3ee701932ac6dcb96b14fbb500f5 378 SMART SM01126 141 307 5.4E-36 T 14-10-2018 IPR024445 ISXO2-like transposase domain DDU33_07130 11426d5b3711f9b37faebe70630b0222 197 SUPERFAMILY SSF89069 3 66 2.62E-16 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 DDU33_07130 11426d5b3711f9b37faebe70630b0222 197 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 119 168 9.8E-18 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal DDU33_07130 11426d5b3711f9b37faebe70630b0222 197 PIRSF PIRSF016938 1 190 5.2E-47 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 DDU33_07130 11426d5b3711f9b37faebe70630b0222 197 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 72 2.5E-20 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 DDU33_07130 11426d5b3711f9b37faebe70630b0222 197 Gene3D G3DSA:1.10.10.880 2 66 6.2E-18 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 DDU33_09000 214f98121029620b7b093379ab6ef5d4 330 Pfam PF03824 High-affinity nickel-transport protein 62 318 5.1E-39 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DDU33_04960 bcdda0a70b7018b15a8fe56b9a8119a0 382 Gene3D G3DSA:1.20.1250.20 1 188 2.2E-16 T 14-10-2018 DDU33_04960 bcdda0a70b7018b15a8fe56b9a8119a0 382 SUPERFAMILY SSF103473 7 378 7.59E-39 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_04960 bcdda0a70b7018b15a8fe56b9a8119a0 382 Pfam PF12832 MFS_1 like family 12 360 3.3E-39 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain DDU33_04960 bcdda0a70b7018b15a8fe56b9a8119a0 382 Gene3D G3DSA:1.20.1250.20 196 381 3.0E-30 T 14-10-2018 DDU33_04960 bcdda0a70b7018b15a8fe56b9a8119a0 382 PIRSF PIRSF004925 1 381 4.1E-97 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter DDU33_06350 9422fd4167907360afef6956f8836b9a 242 SUPERFAMILY SSF52540 2 216 8.77E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06350 9422fd4167907360afef6956f8836b9a 242 Pfam PF00005 ABC transporter 13 155 5.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_06350 9422fd4167907360afef6956f8836b9a 242 Gene3D G3DSA:3.40.50.300 1 239 2.1E-57 T 14-10-2018 DDU33_06350 9422fd4167907360afef6956f8836b9a 242 SMART SM00382 22 201 3.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08580 bd1ffd021c338fbd1ef19ea039d2be3e 333 Pfam PF13394 4Fe-4S single cluster domain 110 191 2.9E-6 T 14-10-2018 DDU33_08580 bd1ffd021c338fbd1ef19ea039d2be3e 333 SUPERFAMILY SSF102114 98 319 7.85E-25 T 14-10-2018 DDU33_08580 bd1ffd021c338fbd1ef19ea039d2be3e 333 PIRSF PIRSF004911 2 333 3.9E-114 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DDU33_08580 bd1ffd021c338fbd1ef19ea039d2be3e 333 Pfam PF04055 Radical SAM superfamily 116 198 2.7E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DDU33_08580 bd1ffd021c338fbd1ef19ea039d2be3e 333 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 324 6.5E-120 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DDU33_08580 bd1ffd021c338fbd1ef19ea039d2be3e 333 Gene3D G3DSA:3.20.20.70 48 330 1.7E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_08580 bd1ffd021c338fbd1ef19ea039d2be3e 333 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 13 331 1.6E-142 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like DDU33_02260 7e414e146702fd766ebd9364d8bbff5a 131 SUPERFAMILY SSF54593 3 128 1.09E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDU33_02260 7e414e146702fd766ebd9364d8bbff5a 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 1.3E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DDU33_02260 7e414e146702fd766ebd9364d8bbff5a 131 Gene3D G3DSA:3.10.180.10 9 128 2.6E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DDU33_09560 d3e9cee014b8d8a10da015d45a294999 299 SUPERFAMILY SSF161098 90 277 1.83E-13 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_09560 d3e9cee014b8d8a10da015d45a294999 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 8.5E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDU33_09560 d3e9cee014b8d8a10da015d45a294999 299 Gene3D G3DSA:1.10.3720.10 85 296 3.1E-9 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_09560 d3e9cee014b8d8a10da015d45a294999 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 7.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_00670 97697898e3c144184430a07a6b9c74f7 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 1 202 5.3E-63 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DDU33_00670 97697898e3c144184430a07a6b9c74f7 208 Pfam PF01914 MarC family integral membrane protein 4 204 1.9E-60 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DDU33_10055 85d5eeb77a071ab7a47ba2cf15c9f118 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 2.7E-50 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 DDU33_10055 85d5eeb77a071ab7a47ba2cf15c9f118 454 Pfam PF14793 Domain of unknown function (DUF4478) 5 109 2.9E-43 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 DDU33_10055 85d5eeb77a071ab7a47ba2cf15c9f118 454 Gene3D G3DSA:3.30.1850.10 2 119 2.7E-43 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 DDU33_10055 85d5eeb77a071ab7a47ba2cf15c9f118 454 Gene3D G3DSA:3.40.50.450 124 452 6.3E-111 T 14-10-2018 DDU33_10055 85d5eeb77a071ab7a47ba2cf15c9f118 454 SUPERFAMILY SSF102405 129 329 2.14E-37 T 14-10-2018 DDU33_10055 85d5eeb77a071ab7a47ba2cf15c9f118 454 Pfam PF03641 Possible lysine decarboxylase 189 328 1.5E-31 T 14-10-2018 IPR031100 LOG family DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 59.801 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 Gene3D G3DSA:3.30.499.10 328 469 8.5E-51 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 SUPERFAMILY SSF53732 1 466 9.42E-166 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 Gene3D G3DSA:3.30.499.20 4 286 2.6E-97 T 14-10-2018 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 7.0E-157 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 119 132 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 400 413 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 133 148 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 286 300 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 343 354 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 195 208 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 209 222 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 82 95 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 PRINTS PR00415 Aconitase family signature 108 116 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 466 1.5E-278 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DDU33_00110 52f91a6c3c332a080b369f4ef72a3fe5 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 1 103 3.9E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DDU33_03530 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DDU33_03245 77c942defab55604133dae133d00ca7b 310 SUPERFAMILY SSF53613 3 303 3.9E-91 T 14-10-2018 IPR029056 Ribokinase-like DDU33_03245 77c942defab55604133dae133d00ca7b 310 Gene3D G3DSA:3.40.1190.20 1 302 1.0E-110 T 14-10-2018 IPR029056 Ribokinase-like DDU33_03245 77c942defab55604133dae133d00ca7b 310 Hamap MF_01987 Ribokinase [rbsK]. 3 302 27.728 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DDU33_03245 77c942defab55604133dae133d00ca7b 310 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 6 301 4.8E-121 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DDU33_03245 77c942defab55604133dae133d00ca7b 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDU33_03245 77c942defab55604133dae133d00ca7b 310 PRINTS PR00990 Ribokinase signature 7 28 5.6E-39 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_03245 77c942defab55604133dae133d00ca7b 310 PRINTS PR00990 Ribokinase signature 34 53 5.6E-39 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_03245 77c942defab55604133dae133d00ca7b 310 PRINTS PR00990 Ribokinase signature 174 189 5.6E-39 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_03245 77c942defab55604133dae133d00ca7b 310 PRINTS PR00990 Ribokinase signature 218 229 5.6E-39 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_03245 77c942defab55604133dae133d00ca7b 310 PRINTS PR00990 Ribokinase signature 106 119 5.6E-39 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_03245 77c942defab55604133dae133d00ca7b 310 Pfam PF00294 pfkB family carbohydrate kinase 3 295 1.3E-80 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 31.522 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 Pfam PF00303 Thymidylate synthase 2 283 6.7E-70 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 Gene3D G3DSA:3.30.572.10 1 283 3.3E-75 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 2.1E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 SUPERFAMILY SSF55831 1 283 1.07E-88 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.2E-10 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.2E-10 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_10690 f6d768a11fdf455bd31cd863c2d840b6 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.2E-10 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DDU33_07625 aa97e8bccd7e7a4697fc62f517a1522c 169 SUPERFAMILY SSF101386 1 69 5.79E-9 T 14-10-2018 DDU33_07625 aa97e8bccd7e7a4697fc62f517a1522c 169 Gene3D G3DSA:1.10.287.1080 1 81 1.8E-7 T 14-10-2018 DDU33_02855 90d88dd2abae5bccf366eff049928444 250 Gene3D G3DSA:3.40.50.1820 26 250 2.6E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_02855 90d88dd2abae5bccf366eff049928444 250 SUPERFAMILY SSF53474 31 247 7.12E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_02855 90d88dd2abae5bccf366eff049928444 250 Pfam PF12697 Alpha/beta hydrolase family 32 243 4.8E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DDU33_02355 ea2d0a329c794ae608c6346ea1dcf519 156 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DDU33_02355 ea2d0a329c794ae608c6346ea1dcf519 156 SUPERFAMILY SSF55804 5 151 5.1E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DDU33_02355 ea2d0a329c794ae608c6346ea1dcf519 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 151 2.8E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DDU33_02355 ea2d0a329c794ae608c6346ea1dcf519 156 Gene3D G3DSA:3.40.930.10 1 155 4.3E-52 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DDU33_00820 68ac48aedc097f6b30f63a3e83d441d6 418 Gene3D G3DSA:1.10.150.130 97 216 2.3E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DDU33_00820 68ac48aedc097f6b30f63a3e83d441d6 418 Pfam PF00589 Phage integrase family 216 384 1.0E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DDU33_00820 68ac48aedc097f6b30f63a3e83d441d6 418 Gene3D G3DSA:1.10.443.10 217 394 3.2E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DDU33_00820 68ac48aedc097f6b30f63a3e83d441d6 418 Pfam PF13356 Arm DNA-binding domain 7 96 6.6E-16 T 14-10-2018 IPR025166 Integrase, DNA-binding domain DDU33_00820 68ac48aedc097f6b30f63a3e83d441d6 418 SUPERFAMILY SSF56349 106 389 2.09E-49 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DDU33_00820 68ac48aedc097f6b30f63a3e83d441d6 418 Gene3D G3DSA:3.30.160.390 5 96 7.4E-25 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DDU33_06905 dc2f6bca233800f478df185b919c6ee9 182 Gene3D G3DSA:1.20.120.1760 3 175 6.5E-16 T 14-10-2018 DDU33_06905 dc2f6bca233800f478df185b919c6ee9 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 1.7E-59 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DDU33_06905 dc2f6bca233800f478df185b919c6ee9 182 PIRSF PIRSF000847 1 181 2.7E-44 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DDU33_06905 dc2f6bca233800f478df185b919c6ee9 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DDU33_06905 dc2f6bca233800f478df185b919c6ee9 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 2.6E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DDU33_00100 922a5e2c85313ccdba6986d30ba8db64 168 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 86 166 3.4E-8 T 14-10-2018 IPR019275 Protein of unknown function DUF2301 DDU33_07455 472e420d556a571598af2b8d32bab3e7 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 3.9E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DDU33_07455 472e420d556a571598af2b8d32bab3e7 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DDU33_07455 472e420d556a571598af2b8d32bab3e7 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 32.638 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DDU33_07455 472e420d556a571598af2b8d32bab3e7 131 SUPERFAMILY SSF54211 6 131 3.22E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_07455 472e420d556a571598af2b8d32bab3e7 131 Gene3D G3DSA:3.30.230.10 2 131 1.6E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_09095 385ac6fddfcf002dc013994524efce02 242 Pfam PF00849 RNA pseudouridylate synthase 11 170 2.3E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_09095 385ac6fddfcf002dc013994524efce02 242 SUPERFAMILY SSF55120 3 239 2.08E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_09095 385ac6fddfcf002dc013994524efce02 242 Gene3D G3DSA:3.30.2350.10 4 235 3.1E-62 T 14-10-2018 DDU33_09095 385ac6fddfcf002dc013994524efce02 242 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_03105 8c44e7c81039417bb46d2723e3470f83 97 Pfam PF04076 Bacterial OB fold (BOF) protein 11 95 1.4E-18 T 14-10-2018 IPR005220 Bacterial OB-fold DDU33_03105 8c44e7c81039417bb46d2723e3470f83 97 SUPERFAMILY SSF101756 11 95 1.7E-19 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DDU33_03105 8c44e7c81039417bb46d2723e3470f83 97 Gene3D G3DSA:2.40.50.200 7 97 2.5E-21 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DDU33_06095 07d6542d897c681e21496e8334c8fd29 396 Gene3D G3DSA:3.90.1150.10 6 387 5.0E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_06095 07d6542d897c681e21496e8334c8fd29 396 SUPERFAMILY SSF53383 4 389 1.5E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_06095 07d6542d897c681e21496e8334c8fd29 396 Pfam PF00266 Aminotransferase class-V 20 383 5.7E-127 T 14-10-2018 IPR000192 Aminotransferase class V domain DDU33_06095 07d6542d897c681e21496e8334c8fd29 396 Gene3D G3DSA:3.40.640.10 30 287 5.0E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_02825 99f06a29c1de59e1323fcd5e23f8305a 363 Gene3D G3DSA:3.40.190.10 147 257 5.4E-37 T 14-10-2018 DDU33_02825 99f06a29c1de59e1323fcd5e23f8305a 363 Pfam PF13343 Bacterial extracellular solute-binding protein 108 299 3.5E-16 T 14-10-2018 DDU33_02825 99f06a29c1de59e1323fcd5e23f8305a 363 Gene3D G3DSA:3.40.190.10 53 306 5.4E-37 T 14-10-2018 DDU33_02825 99f06a29c1de59e1323fcd5e23f8305a 363 SUPERFAMILY SSF53850 38 329 9.88E-49 T 14-10-2018 DDU33_06725 0f488c425aba8eb4fcd96f3d63ed87b8 159 Pfam PF00156 Phosphoribosyl transferase domain 17 150 3.8E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DDU33_06725 0f488c425aba8eb4fcd96f3d63ed87b8 159 SUPERFAMILY SSF53271 9 149 1.25E-28 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_06725 0f488c425aba8eb4fcd96f3d63ed87b8 159 Gene3D G3DSA:3.40.50.2020 6 159 1.4E-39 T 14-10-2018 DDU33_06725 0f488c425aba8eb4fcd96f3d63ed87b8 159 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 6 159 39.679 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 DDU33_08420 307f67c2f1a564f0d21f77e5b9e0b386 263 Gene3D G3DSA:1.10.287.1080 3 128 3.7E-42 T 14-10-2018 DDU33_08420 307f67c2f1a564f0d21f77e5b9e0b386 263 Gene3D G3DSA:1.10.287.1080 132 263 1.8E-46 T 14-10-2018 DDU33_08420 307f67c2f1a564f0d21f77e5b9e0b386 263 TIGRFAM TIGR00444 mazG: MazG family protein 13 260 9.7E-102 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG DDU33_08420 307f67c2f1a564f0d21f77e5b9e0b386 263 SUPERFAMILY SSF101386 139 240 7.48E-25 T 14-10-2018 DDU33_08420 307f67c2f1a564f0d21f77e5b9e0b386 263 SUPERFAMILY SSF101386 6 109 6.35E-24 T 14-10-2018 DDU33_08420 307f67c2f1a564f0d21f77e5b9e0b386 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 2.9E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DDU33_08420 307f67c2f1a564f0d21f77e5b9e0b386 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 167 231 1.3E-8 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DDU33_01355 fd93a01482f70f2534dedb42d184595e 447 Pfam PF09913 Predicted membrane protein (DUF2142) 22 406 4.1E-55 T 14-10-2018 IPR018674 Protein of unknown function DUF2142, membrane DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 46 6.6E-5 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 87 167 4.8E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 SUPERFAMILY SSF53155 5 90 1.29E-11 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 136 142 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 86 165 2.6E-34 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 Gene3D G3DSA:1.10.10.10 85 169 8.5E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 9 166 37.66 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 Gene3D G3DSA:3.30.160.70 4 79 4.7E-10 T 14-10-2018 DDU33_09440 11e3c11e57b6cb1079c9e14934c01421 184 SUPERFAMILY SSF46767 85 167 3.4E-31 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DDU33_01530 92202cfd431cbc26dee388f34c459ff1 333 Gene3D G3DSA:3.30.565.40 104 229 4.2E-16 T 14-10-2018 DDU33_01530 92202cfd431cbc26dee388f34c459ff1 333 Pfam PF11738 Protein of unknown function (DUF3298) 237 307 1.2E-10 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 DDU33_01530 92202cfd431cbc26dee388f34c459ff1 333 Gene3D G3DSA:3.90.640.20 231 322 4.2E-21 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily DDU33_01180 a55454e22d4ef9131f3de16618b16c48 164 Gene3D G3DSA:3.40.1570.10 1 164 9.9E-53 T 14-10-2018 DDU33_01180 a55454e22d4ef9131f3de16618b16c48 164 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 162 2.0E-53 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like DDU33_01180 a55454e22d4ef9131f3de16618b16c48 164 Pfam PF06228 Haem utilisation ChuX/HutX 24 162 1.2E-29 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like DDU33_01180 a55454e22d4ef9131f3de16618b16c48 164 PIRSF PIRSF030840 2 164 5.2E-47 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like DDU33_01180 a55454e22d4ef9131f3de16618b16c48 164 SUPERFAMILY SSF144064 2 163 9.29E-49 T 14-10-2018 DDU33_02740 f4da71de7b6ac535e78af0deb9ff3d16 155 Gene3D G3DSA:3.40.630.30 1 155 4.9E-44 T 14-10-2018 DDU33_02740 f4da71de7b6ac535e78af0deb9ff3d16 155 Pfam PF00583 Acetyltransferase (GNAT) family 48 143 4.4E-17 T 14-10-2018 IPR000182 GNAT domain DDU33_02740 f4da71de7b6ac535e78af0deb9ff3d16 155 SUPERFAMILY SSF55729 1 151 1.89E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_05645 4bb484c9b0af72eff03b3cb686dae42a 216 Gene3D G3DSA:3.30.420.10 10 213 3.0E-55 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DDU33_05645 4bb484c9b0af72eff03b3cb686dae42a 216 Hamap MF_00157 Ribonuclease T [rnt]. 1 216 107.745 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 DDU33_05645 4bb484c9b0af72eff03b3cb686dae42a 216 SUPERFAMILY SSF53098 9 208 4.46E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_05645 4bb484c9b0af72eff03b3cb686dae42a 216 Pfam PF00929 Exonuclease 21 195 1.3E-42 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDU33_05645 4bb484c9b0af72eff03b3cb686dae42a 216 TIGRFAM TIGR01298 RNaseT: ribonuclease T 11 209 1.3E-110 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 DDU33_05645 4bb484c9b0af72eff03b3cb686dae42a 216 SMART SM00479 19 204 3.1E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DDU33_02565 b6f236d355257d571fbec75db8aa1c9c 220 Pfam PF13309 HTH domain 155 212 2.5E-20 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain DDU33_02565 b6f236d355257d571fbec75db8aa1c9c 220 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 11 118 8.0E-52 T 14-10-2018 IPR013559 YheO-like DDU33_02565 b6f236d355257d571fbec75db8aa1c9c 220 Pfam PF08348 YheO-like PAS domain 15 122 2.9E-33 T 14-10-2018 IPR013559 YheO-like DDU33_00940 032ade60a3a26b3c7dd3aabb5bdbc06e 328 SUPERFAMILY SSF110997 257 317 3.14E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DDU33_00940 032ade60a3a26b3c7dd3aabb5bdbc06e 328 Pfam PF05036 Sporulation related domain 258 321 8.9E-16 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DDU33_00940 032ade60a3a26b3c7dd3aabb5bdbc06e 328 Gene3D G3DSA:3.30.70.1070 253 328 1.8E-23 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DDU33_06845 078de18d39048ec98df1c473d14b1668 280 Gene3D G3DSA:3.40.50.150 1 280 7.3E-114 T 14-10-2018 DDU33_06845 078de18d39048ec98df1c473d14b1668 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 8.6E-109 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DDU33_06845 078de18d39048ec98df1c473d14b1668 280 SUPERFAMILY SSF53335 9 279 9.75E-96 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_06845 078de18d39048ec98df1c473d14b1668 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 39.845 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DDU33_02075 40aee2a7b5c061d794279f10312d1b6d 484 Gene3D G3DSA:1.25.40.10 78 213 3.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02075 40aee2a7b5c061d794279f10312d1b6d 484 Pfam PF04575 Protein of unknown function (DUF560) 194 484 2.5E-97 T 14-10-2018 IPR007655 Protein of unknown function DUF560 DDU33_02075 40aee2a7b5c061d794279f10312d1b6d 484 SUPERFAMILY SSF48452 97 174 5.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_00225 e9d7121d00d7b72737785de9bd3aada5 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 325 5.5E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 359 1.7E-67 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 355 4.1E-115 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 Pfam PF01872 RibD C-terminal domain 147 355 1.3E-60 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 Gene3D G3DSA:3.40.430.10 142 363 1.5E-76 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 PIRSF PIRSF006769 1 363 2.1E-151 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 SUPERFAMILY SSF53927 3 144 3.19E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 SUPERFAMILY SSF53597 144 356 4.42E-60 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 99 3.1E-20 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DDU33_07020 c020924e7aea38f30a7b8081f9545baa 371 Gene3D G3DSA:3.40.140.10 1 141 1.7E-47 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 SUPERFAMILY SSF51905 3 340 2.74E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 2.4E-8 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 190 2.4E-8 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.4E-8 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 Gene3D G3DSA:3.50.50.100 1 400 4.8E-115 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.9E-13 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 2.9E-13 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 2.9E-13 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 2.9E-13 T 14-10-2018 DDU33_00250 69ceebff1b843197b85977e1bd0dbffc 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 329 5.4E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 TIGRFAM TIGR00016 ackA: acetate kinase 1 401 1.7E-181 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 SUPERFAMILY SSF53067 5 197 2.76E-62 T 14-10-2018 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 SUPERFAMILY SSF53067 157 400 1.59E-84 T 14-10-2018 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 Gene3D G3DSA:3.30.420.40 3 195 4.4E-72 T 14-10-2018 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 PIRSF PIRSF000722 2 402 2.9E-142 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 PRINTS PR00471 Acetate kinase family signature 382 394 3.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 PRINTS PR00471 Acetate kinase family signature 6 17 3.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 PRINTS PR00471 Acetate kinase family signature 174 187 3.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 PRINTS PR00471 Acetate kinase family signature 204 225 3.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 PRINTS PR00471 Acetate kinase family signature 302 315 3.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 PRINTS PR00471 Acetate kinase family signature 326 342 3.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 Gene3D G3DSA:3.30.420.40 197 402 8.5E-80 T 14-10-2018 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 Hamap MF_00020 Acetate kinase [ackA]. 1 402 182.12 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_08350 41c3a9f42da7f2e84aa995d9b9e11869 402 Pfam PF00871 Acetokinase family 5 395 7.9E-175 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DDU33_01845 00a50240014e3147cedbbabe24899f21 77 SMART SM00823 Phosphopantetheine attachment site 4 62 0.0099 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 DDU33_01845 00a50240014e3147cedbbabe24899f21 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 22.623 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DDU33_01845 00a50240014e3147cedbbabe24899f21 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 1.4E-36 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DDU33_01845 00a50240014e3147cedbbabe24899f21 77 SUPERFAMILY SSF47336 3 75 5.23E-24 T 14-10-2018 IPR036736 ACP-like superfamily DDU33_01845 00a50240014e3147cedbbabe24899f21 77 Pfam PF00550 Phosphopantetheine attachment site 5 72 2.1E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DDU33_01845 00a50240014e3147cedbbabe24899f21 77 Gene3D G3DSA:1.10.1200.10 1 74 2.0E-30 T 14-10-2018 IPR036736 ACP-like superfamily DDU33_01845 00a50240014e3147cedbbabe24899f21 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site DDU33_07085 ae6b6872b15e5089e8ca202bccb3ec18 390 SUPERFAMILY SSF51261 215 387 1.99E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_07085 ae6b6872b15e5089e8ca202bccb3ec18 390 Pfam PF01551 Peptidase family M23 291 385 1.6E-27 T 14-10-2018 IPR016047 Peptidase M23 DDU33_07085 ae6b6872b15e5089e8ca202bccb3ec18 390 Gene3D G3DSA:2.70.70.10 256 389 9.5E-35 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_02710 eee4063bf9f1eee1cf97ff95065f5b5b 203 Pfam PF02361 Cobalt transport protein 11 202 1.7E-17 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 Pfam PF12833 Helix-turn-helix domain 232 311 1.5E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 SUPERFAMILY SSF46689 262 312 5.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 SUPERFAMILY SSF46689 211 260 5.28E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 Pfam PF01965 DJ-1/PfpI family 6 170 1.5E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 SUPERFAMILY SSF52317 5 191 5.73E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 Gene3D G3DSA:1.10.10.60 208 312 1.1E-27 T 14-10-2018 DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 SMART SM00342 226 309 4.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_02980 53b50ad46a86bbad642c3e985d24bb27 315 Gene3D G3DSA:3.40.50.880 4 207 2.1E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DDU33_08745 d301dfcfca3d515204ff345706b24b88 261 Gene3D G3DSA:3.40.50.1820 7 260 9.8E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_08745 d301dfcfca3d515204ff345706b24b88 261 Pfam PF00561 alpha/beta hydrolase fold 22 247 2.3E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DDU33_08745 d301dfcfca3d515204ff345706b24b88 261 SUPERFAMILY SSF53474 7 259 1.98E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_04230 e4d51d9463419dd8291dad5b9d805f40 799 PIRSF PIRSF000460 11 799 5.5E-196 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_04230 e4d51d9463419dd8291dad5b9d805f40 799 Pfam PF00343 Carbohydrate phosphorylase 93 798 4.5E-294 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_04230 e4d51d9463419dd8291dad5b9d805f40 799 SUPERFAMILY SSF53756 5 798 1.65E-275 T 14-10-2018 DDU33_04230 e4d51d9463419dd8291dad5b9d805f40 799 Gene3D G3DSA:3.40.50.2000 458 784 0.0 T 14-10-2018 DDU33_04230 e4d51d9463419dd8291dad5b9d805f40 799 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 644 656 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_04230 e4d51d9463419dd8291dad5b9d805f40 799 Gene3D G3DSA:3.40.50.2000 60 798 0.0 T 14-10-2018 DDU33_04230 e4d51d9463419dd8291dad5b9d805f40 799 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 798 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 8 360 34.725 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 SUPERFAMILY SSF56014 266 355 6.8E-12 T 14-10-2018 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 SUPERFAMILY SSF51717 17 208 2.82E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 Gene3D G3DSA:3.30.413.10 263 363 5.9E-23 T 14-10-2018 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 Gene3D G3DSA:3.20.20.20 2 262 1.2E-105 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 10 352 1.2E-127 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 PIRSF PIRSF004640 3 365 3.1E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDU33_05445 0d01a646f71b047af71b76d78a60a201 370 Pfam PF04551 GcpE protein 14 355 1.7E-131 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DDU33_02320 3e76c4b1a7eafc20b75b117148de85b9 299 Gene3D G3DSA:3.40.50.1100 8 295 3.7E-96 T 14-10-2018 DDU33_02320 3e76c4b1a7eafc20b75b117148de85b9 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 288 5.8E-58 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DDU33_02320 3e76c4b1a7eafc20b75b117148de85b9 299 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DDU33_02320 3e76c4b1a7eafc20b75b117148de85b9 299 SUPERFAMILY SSF53686 6 296 4.58E-78 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDU33_02320 3e76c4b1a7eafc20b75b117148de85b9 299 Gene3D G3DSA:3.40.50.1100 42 143 3.7E-96 T 14-10-2018 DDU33_02270 790950a5c69df82d5d6b5cb144a643d3 173 PIRSF PIRSF039093 1 173 4.0E-78 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DDU33_02270 790950a5c69df82d5d6b5cb144a643d3 173 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 173 2.2E-79 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DDU33_02270 790950a5c69df82d5d6b5cb144a643d3 173 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 173 40.264 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DDU33_02270 790950a5c69df82d5d6b5cb144a643d3 173 SUPERFAMILY SSF56235 1 173 6.51E-55 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_02270 790950a5c69df82d5d6b5cb144a643d3 173 Pfam PF00227 Proteasome subunit 2 171 1.3E-23 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DDU33_02270 790950a5c69df82d5d6b5cb144a643d3 173 Gene3D G3DSA:3.60.20.10 1 173 1.4E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DDU33_00795 54ce825026acc9847f8866e57b6a380c 106 SUPERFAMILY SSF54909 1 100 3.8E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DDU33_00795 54ce825026acc9847f8866e57b6a380c 106 Gene3D G3DSA:3.30.70.100 1 94 1.3E-24 T 14-10-2018 DDU33_00795 54ce825026acc9847f8866e57b6a380c 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.3E-13 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DDU33_02935 45b55d3f35796f63c1ccefbcdfd170cb 237 Pfam PF01863 Protein of unknown function DUF45 27 235 1.7E-57 T 14-10-2018 IPR002725 Protein of unknown function DUF45 DDU33_02935 45b55d3f35796f63c1ccefbcdfd170cb 237 Gene3D G3DSA:3.30.2010.10 150 235 9.7E-20 T 14-10-2018 DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 SUPERFAMILY SSF56176 13 285 9.45E-52 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 Pfam PF01565 FAD binding domain 52 192 1.1E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 675 686 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 Gene3D G3DSA:3.30.465.40 19 213 4.8E-45 T 14-10-2018 DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 Pfam PF13183 4Fe-4S dicluster domain 578 689 5.5E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 SUPERFAMILY SSF46548 564 696 2.62E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 Pfam PF02913 FAD linked oxidases, C-terminal domain 284 542 2.6E-59 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DDU33_04070 562c8af4f63088dc69c38df99cdbd087 1029 SUPERFAMILY SSF55103 262 545 1.08E-49 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 17.986 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.1E-49 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 SUPERFAMILY SSF47928 3 104 1.18E-26 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.8E-54 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03195 c76bb3dab06dbf163977d1eb816a5b17 177 Gene3D G3DSA:1.10.520.20 2 106 2.5E-35 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 Gene3D G3DSA:3.40.50.300 68 281 3.0E-39 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 Pfam PF13481 AAA domain 87 224 4.0E-11 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.2E-9 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 SMART SM00382 93 246 2.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.1E-230 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 PRINTS PR01874 DNA repair protein radA signature 11 35 1.3E-93 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 PRINTS PR01874 DNA repair protein radA signature 85 113 1.3E-93 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 PRINTS PR01874 DNA repair protein radA signature 176 200 1.3E-93 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 PRINTS PR01874 DNA repair protein radA signature 215 243 1.3E-93 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 PRINTS PR01874 DNA repair protein radA signature 324 347 1.3E-93 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 PRINTS PR01874 DNA repair protein radA signature 126 143 1.3E-93 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 PRINTS PR01874 DNA repair protein radA signature 250 276 1.3E-93 T 14-10-2018 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 Hamap MF_01498 DNA repair protein RadA [radA]. 22 457 43.376 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 SUPERFAMILY SSF52540 70 289 3.81E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 Gene3D G3DSA:3.30.230.10 332 459 1.9E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DDU33_09265 db52bce915b6e8ed7f96814a92856f85 459 SUPERFAMILY SSF54211 257 456 1.52E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DDU33_08855 c547b4eb328e7fbf4df61015b057eb83 210 Gene3D G3DSA:2.50.20.10 34 210 6.1E-46 T 14-10-2018 DDU33_08855 c547b4eb328e7fbf4df61015b057eb83 210 Pfam PF03550 Outer membrane lipoprotein LolB 55 208 2.0E-38 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DDU33_08855 c547b4eb328e7fbf4df61015b057eb83 210 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 12 210 7.6E-52 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DDU33_08855 c547b4eb328e7fbf4df61015b057eb83 210 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 210 26.967 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DDU33_08855 c547b4eb328e7fbf4df61015b057eb83 210 SUPERFAMILY SSF89392 38 210 4.32E-51 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 SMART SM00382 415 581 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 SUPERFAMILY SSF90123 58 369 2.88E-21 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 Pfam PF06472 ABC transporter transmembrane region 2 35 322 1.1E-63 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 Pfam PF00005 ABC transporter 406 540 6.5E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 ProSitePatterns PS00211 ABC transporters family signature. 512 526 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 Gene3D G3DSA:3.40.50.300 391 591 1.3E-36 T 14-10-2018 DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 Gene3D G3DSA:1.20.1560.10 40 371 1.9E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DDU33_08765 2cb81461437ab56d7499132bf99c3da6 592 SUPERFAMILY SSF52540 398 584 7.2E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10060 5eeeb6d3cf5b12ae3845d5e9f2534e0e 328 Pfam PF01548 Transposase 8 158 1.0E-30 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DDU33_10060 5eeeb6d3cf5b12ae3845d5e9f2534e0e 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 198 271 1.2E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DDU33_02475 5eeeb6d3cf5b12ae3845d5e9f2534e0e 328 Pfam PF01548 Transposase 8 158 1.0E-30 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DDU33_02475 5eeeb6d3cf5b12ae3845d5e9f2534e0e 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 198 271 1.2E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DDU33_07240 5eeeb6d3cf5b12ae3845d5e9f2534e0e 328 Pfam PF01548 Transposase 8 158 1.0E-30 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DDU33_07240 5eeeb6d3cf5b12ae3845d5e9f2534e0e 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 198 271 1.2E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DDU33_01905 a5a209b18ee9a519477f817d333e9cb9 302 Gene3D G3DSA:1.25.40.10 154 295 2.4E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_01905 a5a209b18ee9a519477f817d333e9cb9 302 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 117 8.6E-27 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI DDU33_01905 a5a209b18ee9a519477f817d333e9cb9 302 SUPERFAMILY SSF48452 163 271 1.31E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_09220 96321193bf43ce0987d4e5bea398c971 292 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 23 288 5.0E-100 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 DDU33_09220 96321193bf43ce0987d4e5bea398c971 292 SUPERFAMILY SSF51730 20 291 4.32E-93 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like DDU33_09220 96321193bf43ce0987d4e5bea398c971 292 Pfam PF02219 Methylenetetrahydrofolate reductase 14 289 2.2E-106 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DDU33_09220 96321193bf43ce0987d4e5bea398c971 292 Gene3D G3DSA:3.20.20.220 1 292 6.8E-111 T 14-10-2018 DDU33_03780 83ae39928f32dee8724b3af04437635b 134 Gene3D G3DSA:3.30.160.250 1 85 3.4E-28 T 14-10-2018 DDU33_03780 83ae39928f32dee8724b3af04437635b 134 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 128 2.5E-52 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system DDU33_03780 83ae39928f32dee8724b3af04437635b 134 SUPERFAMILY SSF143100 1 66 1.57E-22 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like DDU33_02875 c91f1138114916610025d9da15a018aa 106 SMART SM00347 17 104 0.005 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_02875 c91f1138114916610025d9da15a018aa 106 SUPERFAMILY SSF46785 10 92 2.77E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_02875 c91f1138114916610025d9da15a018aa 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_02875 c91f1138114916610025d9da15a018aa 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 4.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_02875 c91f1138114916610025d9da15a018aa 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_02875 c91f1138114916610025d9da15a018aa 106 SMART SM00418 14 93 9.5E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_02875 c91f1138114916610025d9da15a018aa 106 Pfam PF01022 Bacterial regulatory protein, arsR family 21 67 2.9E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DDU33_02875 c91f1138114916610025d9da15a018aa 106 Gene3D G3DSA:1.10.10.10 1 97 3.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_07220 1b05b897235f6059b84b6665e775e3b1 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 118 8.2E-36 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DDU33_07220 1b05b897235f6059b84b6665e775e3b1 120 Gene3D G3DSA:1.10.3830.10 4 120 9.9E-39 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DDU33_07220 1b05b897235f6059b84b6665e775e3b1 120 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DDU33_09405 ef2c601eb46cf3dbeaeeee3dafc2ab48 271 SUPERFAMILY SSF53448 11 269 2.39E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_09405 ef2c601eb46cf3dbeaeeee3dafc2ab48 271 Pfam PF01501 Glycosyl transferase family 8 11 243 4.0E-37 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 DDU33_09405 ef2c601eb46cf3dbeaeeee3dafc2ab48 271 Gene3D G3DSA:3.90.550.10 8 264 2.6E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_10510 ab7c8c0089b852e2531ec2474c0741ca 288 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 159 284 6.7E-41 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDU33_10510 ab7c8c0089b852e2531ec2474c0741ca 288 Gene3D G3DSA:3.30.1400.10 156 288 1.2E-38 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 DDU33_10510 ab7c8c0089b852e2531ec2474c0741ca 288 SMART SM00771 156 287 1.6E-57 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDU33_10510 ab7c8c0089b852e2531ec2474c0741ca 288 Hamap MF_00509 Cell division protein ZipA [zipA]. 1 288 20.432 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 DDU33_10510 ab7c8c0089b852e2531ec2474c0741ca 288 SUPERFAMILY SSF64383 157 288 1.7E-40 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 DDU33_10510 ab7c8c0089b852e2531ec2474c0741ca 288 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 7 286 2.1E-49 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 DDU33_10510 ab7c8c0089b852e2531ec2474c0741ca 288 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 159 283 9.0E-48 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DDU33_03735 13babc8ad3ec640bbb0dc4bc34bcfd7b 368 Gene3D G3DSA:3.30.420.40 144 328 2.8E-134 T 14-10-2018 DDU33_03735 13babc8ad3ec640bbb0dc4bc34bcfd7b 368 SUPERFAMILY SSF53067 5 341 5.99E-27 T 14-10-2018 DDU33_03735 13babc8ad3ec640bbb0dc4bc34bcfd7b 368 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 368 41.144 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DDU33_03735 13babc8ad3ec640bbb0dc4bc34bcfd7b 368 Gene3D G3DSA:3.30.420.40 11 363 2.8E-134 T 14-10-2018 DDU33_03735 13babc8ad3ec640bbb0dc4bc34bcfd7b 368 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 368 3.1E-171 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DDU33_09905 54a0e36440f7aae9f841f3e072dafbd7 317 Pfam PF01758 Sodium Bile acid symporter family 43 220 1.5E-47 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DDU33_09905 54a0e36440f7aae9f841f3e072dafbd7 317 Gene3D G3DSA:1.20.1530.20 1 308 3.2E-114 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DDU33_09065 c30f5fd4df15eee3c1ca96c229d6d163 303 SUPERFAMILY SSF142338 14 295 2.35E-76 T 14-10-2018 DDU33_09065 c30f5fd4df15eee3c1ca96c229d6d163 303 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 15 263 3.5E-85 T 14-10-2018 IPR010119 Gluconeogenesis factor DDU33_09065 c30f5fd4df15eee3c1ca96c229d6d163 303 Gene3D G3DSA:3.40.50.12300 12 302 1.7E-75 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily DDU33_09065 c30f5fd4df15eee3c1ca96c229d6d163 303 Pfam PF01933 Uncharacterised protein family UPF0052 15 291 9.5E-71 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DDU33_09065 c30f5fd4df15eee3c1ca96c229d6d163 303 Hamap MF_00973 Gluconeogenesis factor. 11 301 30.044 T 14-10-2018 IPR010119 Gluconeogenesis factor DDU33_04935 278b3c71caf1b6759c158db15342f044 101 Pfam PF05258 Protein of unknown function (DUF721) 9 87 1.0E-9 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 DDU33_09155 a133e7c1d4c941d31a78669b8f3dbc20 63 Gene3D G3DSA:3.30.70.1680 1 59 2.0E-28 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DDU33_09155 a133e7c1d4c941d31a78669b8f3dbc20 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.7E-28 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DDU33_09155 a133e7c1d4c941d31a78669b8f3dbc20 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-17 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DDU33_09155 a133e7c1d4c941d31a78669b8f3dbc20 63 SUPERFAMILY SSF117130 1 53 3.14E-20 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DDU33_09155 a133e7c1d4c941d31a78669b8f3dbc20 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 62 17.437 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DDU33_09155 a133e7c1d4c941d31a78669b8f3dbc20 63 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DDU33_03190 7f194477d6d73f466e0fd666c9876e8c 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 8.8E-34 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DDU33_03190 7f194477d6d73f466e0fd666c9876e8c 156 Gene3D G3DSA:1.20.5.620 62 122 5.4E-19 T 14-10-2018 DDU33_03190 7f194477d6d73f466e0fd666c9876e8c 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.766 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DDU33_03190 7f194477d6d73f466e0fd666c9876e8c 156 SUPERFAMILY SSF81573 62 121 1.83E-12 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DDU33_03190 7f194477d6d73f466e0fd666c9876e8c 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.5E-54 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DDU33_06455 bba2c2051e35f3670643710559614998 343 Gene3D G3DSA:3.30.420.40 129 298 4.3E-131 T 14-10-2018 DDU33_06455 bba2c2051e35f3670643710559614998 343 SUPERFAMILY SSF53067 2 123 1.42E-31 T 14-10-2018 DDU33_06455 bba2c2051e35f3670643710559614998 343 SUPERFAMILY SSF53067 101 314 1.3E-44 T 14-10-2018 DDU33_06455 bba2c2051e35f3670643710559614998 343 Pfam PF00814 Glycoprotease family 24 312 5.1E-103 T 14-10-2018 IPR000905 Gcp-like domain DDU33_06455 bba2c2051e35f3670643710559614998 343 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 311 9.1E-129 T 14-10-2018 IPR017861 Kae1/TsaD family DDU33_06455 bba2c2051e35f3670643710559614998 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family DDU33_06455 bba2c2051e35f3670643710559614998 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 3.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family DDU33_06455 bba2c2051e35f3670643710559614998 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family DDU33_06455 bba2c2051e35f3670643710559614998 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family DDU33_06455 bba2c2051e35f3670643710559614998 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family DDU33_06455 bba2c2051e35f3670643710559614998 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.3E-53 T 14-10-2018 IPR017861 Kae1/TsaD family DDU33_06455 bba2c2051e35f3670643710559614998 343 Gene3D G3DSA:3.30.420.40 3 320 4.3E-131 T 14-10-2018 DDU33_06455 bba2c2051e35f3670643710559614998 343 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 318 9.5E-136 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DDU33_06455 bba2c2051e35f3670643710559614998 343 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 DDU33_06455 bba2c2051e35f3670643710559614998 343 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 336 64.753 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 Gene3D G3DSA:1.10.10.60 3 96 4.6E-31 T 14-10-2018 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 PIRSF PIRSF002097 1 97 5.3E-42 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 PRINTS PR01591 DNA-binding protein FIS signature 25 41 5.8E-29 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 PRINTS PR01591 DNA-binding protein FIS signature 8 25 5.8E-29 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 PRINTS PR01591 DNA-binding protein FIS signature 41 56 5.8E-29 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 PRINTS PR01591 DNA-binding protein FIS signature 56 68 5.8E-29 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 Pfam PF02954 Bacterial regulatory protein, Fis family 54 94 5.7E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 SUPERFAMILY SSF46689 12 96 2.4E-25 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 77 97 2.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDU33_05385 05965c7561c986f5d3da2b089e6a10ba 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 60 77 2.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 353 373 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 Gene3D G3DSA:3.30.420.40 242 486 8.0E-52 T 14-10-2018 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 PIRSF PIRSF000538 1 486 1.4E-98 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 Gene3D G3DSA:3.30.420.40 1 240 3.3E-66 T 14-10-2018 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 SUPERFAMILY SSF53067 1 246 9.43E-61 T 14-10-2018 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 SUPERFAMILY SSF53067 253 483 3.7E-52 T 14-10-2018 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 2.2E-22 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DDU33_01550 f702c2f9ff2aeb4bbc7b529cf7080f95 486 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 2.6E-84 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DDU33_09690 82e396ed47a13609fe676962309b2d7c 155 Pfam PF10675 Protein of unknown function (DUF2489) 15 144 7.3E-42 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 DDU33_03165 5c30fe6b005ffffea6dce927e072c6e4 249 Gene3D G3DSA:3.40.50.300 1 248 5.1E-77 T 14-10-2018 DDU33_03165 5c30fe6b005ffffea6dce927e072c6e4 249 PIRSF PIRSF039085 1 248 1.6E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DDU33_03165 5c30fe6b005ffffea6dce927e072c6e4 249 SMART SM00382 26 220 5.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_03165 5c30fe6b005ffffea6dce927e072c6e4 249 Pfam PF00005 ABC transporter 17 172 2.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_03165 5c30fe6b005ffffea6dce927e072c6e4 249 SUPERFAMILY SSF52540 1 242 1.43E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03165 5c30fe6b005ffffea6dce927e072c6e4 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_07320 4a183074f44c2365177fa46a22421d43 230 SUPERFAMILY SSF52833 94 229 2.39E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_07320 4a183074f44c2365177fa46a22421d43 230 Pfam PF13098 Thioredoxin-like domain 105 228 3.6E-27 T 14-10-2018 IPR012336 Thioredoxin-like fold DDU33_07320 4a183074f44c2365177fa46a22421d43 230 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 71 1.2E-8 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DDU33_07320 4a183074f44c2365177fa46a22421d43 230 Gene3D G3DSA:3.10.450.70 18 75 1.3E-13 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DDU33_07320 4a183074f44c2365177fa46a22421d43 230 Gene3D G3DSA:3.40.30.10 76 230 5.3E-46 T 14-10-2018 DDU33_07320 4a183074f44c2365177fa46a22421d43 230 SUPERFAMILY SSF54423 22 71 9.03E-11 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DDU33_04315 cddb5a000df7691038a4495f0dd3cdba 454 Gene3D G3DSA:3.40.640.10 71 336 3.5E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_04315 cddb5a000df7691038a4495f0dd3cdba 454 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 453 2.7E-253 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DDU33_04315 cddb5a000df7691038a4495f0dd3cdba 454 SUPERFAMILY SSF53383 25 445 6.05E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_04315 cddb5a000df7691038a4495f0dd3cdba 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_04315 cddb5a000df7691038a4495f0dd3cdba 454 Pfam PF00202 Aminotransferase class-III 35 443 8.9E-98 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DDU33_04315 cddb5a000df7691038a4495f0dd3cdba 454 Gene3D G3DSA:3.90.1150.10 17 442 3.5E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_04550 31039fd9ecd01dd2d51849d1bf01f7cf 471 PIRSF PIRSF006060 1 469 6.7E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DDU33_04550 31039fd9ecd01dd2d51849d1bf01f7cf 471 Pfam PF13520 Amino acid permease 6 411 3.2E-72 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DDU33_04550 31039fd9ecd01dd2d51849d1bf01f7cf 471 Gene3D G3DSA:1.20.1740.10 1 456 9.8E-60 T 14-10-2018 DDU33_04550 31039fd9ecd01dd2d51849d1bf01f7cf 471 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 463 3.3E-151 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 DDU33_08775 5bf111fa35a6a875ff4d13aede213a03 208 Pfam PF01728 FtsJ-like methyltransferase 30 206 4.2E-56 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DDU33_08775 5bf111fa35a6a875ff4d13aede213a03 208 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 19 206 1.0E-94 T 14-10-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 DDU33_08775 5bf111fa35a6a875ff4d13aede213a03 208 SUPERFAMILY SSF53335 30 208 2.07E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_08775 5bf111fa35a6a875ff4d13aede213a03 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 14 207 27.406 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DDU33_08775 5bf111fa35a6a875ff4d13aede213a03 208 Gene3D G3DSA:3.40.50.150 30 208 1.2E-59 T 14-10-2018 DDU33_08775 5bf111fa35a6a875ff4d13aede213a03 208 PIRSF PIRSF005461 1 208 1.2E-81 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DDU33_00550 3c8149b1ea70847d5d78079f849f8ad3 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.853 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDU33_00550 3c8149b1ea70847d5d78079f849f8ad3 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 7.6E-41 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDU33_00550 3c8149b1ea70847d5d78079f849f8ad3 109 Gene3D G3DSA:3.30.1310.10 1 109 1.8E-48 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DDU33_00550 3c8149b1ea70847d5d78079f849f8ad3 109 SUPERFAMILY SSF82607 11 103 3.92E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DDU33_00550 3c8149b1ea70847d5d78079f849f8ad3 109 PIRSF PIRSF004555 4 109 8.9E-38 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDU33_00550 3c8149b1ea70847d5d78079f849f8ad3 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 9.8E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 Gene3D G3DSA:1.10.3720.10 274 517 1.1E-68 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 Gene3D G3DSA:1.20.58.370 5 96 2.8E-27 T 14-10-2018 IPR035277 MalF, N-terminal DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 Gene3D G3DSA:2.40.430.10 119 208 1.4E-44 T 14-10-2018 DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 SUPERFAMILY SSF161098 265 507 3.14E-57 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 SUPERFAMILY SSF160964 15 264 2.09E-74 T 14-10-2018 DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 Gene3D G3DSA:3.10.650.10 99 273 1.4E-44 T 14-10-2018 DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 101 264 4.2E-54 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain DDU33_04190 ba543ca88ce3c8c56a63269e576a0df8 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 301 503 1.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_08040 8825caadb2b9f4344183c6f053bc6600 650 Gene3D G3DSA:3.40.50.1110 278 522 1.9E-8 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DDU33_08040 8825caadb2b9f4344183c6f053bc6600 650 SUPERFAMILY SSF52266 281 512 4.76E-14 T 14-10-2018 DDU33_08040 8825caadb2b9f4344183c6f053bc6600 650 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 338 510 4.4E-7 T 14-10-2018 IPR005181 Sialate O-acetylesterase domain DDU33_00885 c21710f6d8bfdf46ae9173ab74a5fedf 260 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 17 258 1.6E-80 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DDU33_00885 c21710f6d8bfdf46ae9173ab74a5fedf 260 Gene3D G3DSA:3.40.50.1820 4 260 1.4E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_00885 c21710f6d8bfdf46ae9173ab74a5fedf 260 SUPERFAMILY SSF53474 6 259 3.01E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_00885 c21710f6d8bfdf46ae9173ab74a5fedf 260 Pfam PF00561 alpha/beta hydrolase fold 18 243 6.0E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DDU33_00885 c21710f6d8bfdf46ae9173ab74a5fedf 260 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 7 260 31.875 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DDU33_05020 785186408956b25de933663e15d2a368 312 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 306 9.5E-87 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 DDU33_05020 785186408956b25de933663e15d2a368 312 SUPERFAMILY SSF51735 1 242 2.58E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_05020 785186408956b25de933663e15d2a368 312 Pfam PF08338 Domain of unknown function (DUF1731) 267 306 2.3E-13 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 DDU33_05020 785186408956b25de933663e15d2a368 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 7.7E-20 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DDU33_05020 785186408956b25de933663e15d2a368 312 Gene3D G3DSA:3.40.50.720 1 303 2.2E-61 T 14-10-2018 DDU33_10160 deeae917dd69e5ccfecd17298706815d 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 6 150 18.612 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DDU33_10160 deeae917dd69e5ccfecd17298706815d 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 25 132 2.0E-26 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DDU33_10160 deeae917dd69e5ccfecd17298706815d 150 Pfam PF04284 Protein of unknown function (DUF441) 10 147 1.3E-45 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DDU33_09145 d1e19c72f24b73d9cb4ecbfb9ec01fbf 295 SUPERFAMILY SSF53448 1 281 6.76E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_09145 d1e19c72f24b73d9cb4ecbfb9ec01fbf 295 Pfam PF00483 Nucleotidyl transferase 3 269 1.8E-27 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DDU33_09145 d1e19c72f24b73d9cb4ecbfb9ec01fbf 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 1 269 4.8E-116 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DDU33_09145 d1e19c72f24b73d9cb4ecbfb9ec01fbf 295 Gene3D G3DSA:3.90.550.10 1 294 7.3E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_01585 2cc4f446f2f648a0373112641dc5ed0d 266 Pfam PF09339 IclR helix-turn-helix domain 11 59 4.9E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDU33_01585 2cc4f446f2f648a0373112641dc5ed0d 266 Pfam PF01614 Bacterial transcriptional regulator 130 256 2.5E-33 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DDU33_01585 2cc4f446f2f648a0373112641dc5ed0d 266 Gene3D G3DSA:1.10.10.10 8 79 2.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_01585 2cc4f446f2f648a0373112641dc5ed0d 266 SUPERFAMILY SSF55781 76 260 3.47E-40 T 14-10-2018 DDU33_01585 2cc4f446f2f648a0373112641dc5ed0d 266 SMART SM00346 9 99 1.2E-36 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DDU33_01585 2cc4f446f2f648a0373112641dc5ed0d 266 Gene3D G3DSA:3.30.450.40 80 265 2.4E-58 T 14-10-2018 IPR029016 GAF-like domain superfamily DDU33_01585 2cc4f446f2f648a0373112641dc5ed0d 266 SUPERFAMILY SSF46785 10 82 1.07E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_02870 d3f4641bf21187f66204899031085e77 403 SUPERFAMILY SSF51395 1 334 1.86E-99 T 14-10-2018 DDU33_02870 d3f4641bf21187f66204899031085e77 403 Gene3D G3DSA:3.20.20.70 1 348 3.5E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_02870 d3f4641bf21187f66204899031085e77 403 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 335 1.1E-59 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDU33_10295 202cfe393ee389f79fc00c90be06ea28 270 PIRSF PIRSF002854 1 270 2.0E-99 T 14-10-2018 IPR004872 Lipoprotein NlpA family DDU33_10295 202cfe393ee389f79fc00c90be06ea28 270 Gene3D G3DSA:3.40.190.10 35 264 2.3E-88 T 14-10-2018 DDU33_10295 202cfe393ee389f79fc00c90be06ea28 270 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 11 270 3.7E-111 T 14-10-2018 IPR004872 Lipoprotein NlpA family DDU33_10295 202cfe393ee389f79fc00c90be06ea28 270 Gene3D G3DSA:3.40.190.10 116 220 2.3E-88 T 14-10-2018 DDU33_10295 202cfe393ee389f79fc00c90be06ea28 270 SUPERFAMILY SSF53850 34 270 2.37E-79 T 14-10-2018 DDU33_10295 202cfe393ee389f79fc00c90be06ea28 270 Pfam PF03180 NLPA lipoprotein 34 270 1.4E-96 T 14-10-2018 IPR004872 Lipoprotein NlpA family DDU33_03150 4ecca759f25e2f24a85d1b446240afd2 170 SUPERFAMILY SSF52540 3 167 3.46E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_03150 4ecca759f25e2f24a85d1b446240afd2 170 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 166 2.7E-66 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 DDU33_03150 4ecca759f25e2f24a85d1b446240afd2 170 Gene3D G3DSA:3.40.50.300 2 168 1.6E-63 T 14-10-2018 DDU33_03150 4ecca759f25e2f24a85d1b446240afd2 170 Pfam PF01202 Shikimate kinase 13 167 3.6E-12 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDU33_07050 ae3d400d2a03a063d288425138e98058 245 Gene3D G3DSA:3.60.140.10 1 243 4.1E-90 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DDU33_07050 ae3d400d2a03a063d288425138e98058 245 SUPERFAMILY SSF64438 2 244 4.76E-83 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DDU33_07050 ae3d400d2a03a063d288425138e98058 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 242 2.8E-75 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DDU33_07050 ae3d400d2a03a063d288425138e98058 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 243 1.3E-71 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DDU33_03455 e4755c1ed10c4991acb1e9adbd060729 115 Pfam PF16068 Domain of unknown function (DUF4810) 28 111 2.1E-26 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats DDU33_03455 e4755c1ed10c4991acb1e9adbd060729 115 PIRSF PIRSF020555 1 115 6.0E-24 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats DDU33_03455 e4755c1ed10c4991acb1e9adbd060729 115 SUPERFAMILY SSF48452 41 112 7.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_06900 8576c26095252ed2d0687ed556af605d 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 214 1.1E-39 T 14-10-2018 IPR006214 Bax inhibitor 1-related DDU33_06680 6766cf4ef5e1617269d987af0d00905a 167 SUPERFAMILY SSF55804 1 156 9.55E-30 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DDU33_06680 6766cf4ef5e1617269d987af0d00905a 167 Gene3D G3DSA:3.40.930.10 1 165 7.5E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DDU33_06680 6766cf4ef5e1617269d987af0d00905a 167 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 157 3.3E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DDU33_05335 526e0e1b87648e47d6884c70cf00f2d8 334 SUPERFAMILY SSF161098 92 318 3.43E-18 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_05335 526e0e1b87648e47d6884c70cf00f2d8 334 Gene3D G3DSA:1.10.3720.10 86 326 2.0E-22 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_05335 526e0e1b87648e47d6884c70cf00f2d8 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 332 4.4E-44 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_07350 a55e81fcb82ec2190b3736430f432f26 268 SUPERFAMILY SSF52540 12 260 7.21E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_07350 a55e81fcb82ec2190b3736430f432f26 268 SMART SM00382 46 238 8.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_07350 a55e81fcb82ec2190b3736430f432f26 268 Gene3D G3DSA:3.40.50.300 9 267 1.5E-82 T 14-10-2018 DDU33_07350 a55e81fcb82ec2190b3736430f432f26 268 Pfam PF00005 ABC transporter 38 189 7.7E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_07350 a55e81fcb82ec2190b3736430f432f26 268 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_06035 f4a5a4848711b7ec715542b481055b67 95 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 2 93 8.2E-27 T 14-10-2018 IPR011846 Cyd operon protein YbgE DDU33_06035 f4a5a4848711b7ec715542b481055b67 95 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 14 91 1.5E-20 T 14-10-2018 IPR011846 Cyd operon protein YbgE DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Gene3D G3DSA:1.10.486.10 596 740 1.7E-111 T 14-10-2018 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 4 1201 8.4E-303 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Gene3D G3DSA:3.90.320.10 906 1202 2.0E-81 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 SUPERFAMILY SSF52980 915 1201 2.68E-73 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 456 4.0E-63 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Pfam PF12705 PD-(D/E)XK nuclease superfamily 979 1174 5.0E-7 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Pfam PF13361 UvrD-like helicase C-terminal domain 462 829 5.9E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1202 20.689 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Gene3D G3DSA:3.40.50.300 465 838 1.7E-111 T 14-10-2018 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Gene3D G3DSA:1.10.3170.10 156 366 1.1E-131 T 14-10-2018 DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 SUPERFAMILY SSF52540 8 837 1.98E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06980 7df231b988c29290d04c14858920cd2e 1202 Gene3D G3DSA:3.40.50.300 4 455 1.1E-131 T 14-10-2018 DDU33_04430 930dd4081ed2d933acb03b4d670c5a41 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.1E-21 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04430 930dd4081ed2d933acb03b4d670c5a41 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 18.344 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04430 930dd4081ed2d933acb03b4d670c5a41 56 SUPERFAMILY SSF57829 2 55 9.77E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DDU33_04430 930dd4081ed2d933acb03b4d670c5a41 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.5E-22 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_01910 5c76f6416a8628d12c8fb2be54961bf7 196 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 8 152 1.8E-41 T 14-10-2018 IPR001453 MoaB/Mog domain DDU33_01910 5c76f6416a8628d12c8fb2be54961bf7 196 Gene3D G3DSA:3.40.980.10 7 196 3.1E-63 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DDU33_01910 5c76f6416a8628d12c8fb2be54961bf7 196 SMART SM00852 12 158 1.3E-21 T 14-10-2018 IPR001453 MoaB/Mog domain DDU33_01910 5c76f6416a8628d12c8fb2be54961bf7 196 Pfam PF00994 Probable molybdopterin binding domain 13 152 1.0E-28 T 14-10-2018 IPR001453 MoaB/Mog domain DDU33_01910 5c76f6416a8628d12c8fb2be54961bf7 196 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 74 87 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DDU33_01910 5c76f6416a8628d12c8fb2be54961bf7 196 SUPERFAMILY SSF53218 8 193 3.66E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DDU33_09550 0f280f7d79a894697f0abc7be9996adc 179 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 167 178 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDU33_09550 0f280f7d79a894697f0abc7be9996adc 179 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 39 178 4.7E-35 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDU33_09550 0f280f7d79a894697f0abc7be9996adc 179 SUPERFAMILY SSF49329 33 179 4.19E-51 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDU33_09550 0f280f7d79a894697f0abc7be9996adc 179 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 70 80 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDU33_09550 0f280f7d79a894697f0abc7be9996adc 179 Gene3D G3DSA:2.60.40.200 26 179 6.1E-51 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DDU33_05785 5c6e59914fdd64eecae2a7fd63893120 270 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 10 240 7.4E-61 T 14-10-2018 IPR005519 Acid phosphatase, class B-like DDU33_05785 5c6e59914fdd64eecae2a7fd63893120 270 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 2 267 1.2E-97 T 14-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 DDU33_05785 5c6e59914fdd64eecae2a7fd63893120 270 PIRSF PIRSF019271 1 270 6.4E-105 T 14-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 DDU33_05785 5c6e59914fdd64eecae2a7fd63893120 270 SUPERFAMILY SSF56784 53 248 2.61E-34 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_05785 5c6e59914fdd64eecae2a7fd63893120 270 Gene3D G3DSA:3.40.50.1000 21 270 1.0E-98 T 14-10-2018 IPR023214 HAD superfamily DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 Pfam PF02142 MGS-like domain 26 117 4.5E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.209 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 PIRSF PIRSF006614 8 151 1.1E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.9E-68 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 Gene3D G3DSA:3.40.50.1380 1 152 1.8E-65 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 SUPERFAMILY SSF52335 2 147 4.06E-55 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DDU33_01130 3a5640a87906c9867a2c70d6de7b0acc 152 SMART SM00851 25 118 1.6E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DDU33_06170 c918fee8ae77ff2ef15aedc66fd5a7d9 212 Pfam PF00849 RNA pseudouridylate synthase 13 156 4.3E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06170 c918fee8ae77ff2ef15aedc66fd5a7d9 212 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 5 206 3.1E-94 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like DDU33_06170 c918fee8ae77ff2ef15aedc66fd5a7d9 212 Gene3D G3DSA:3.30.2350.10 1 197 1.3E-53 T 14-10-2018 DDU33_06170 c918fee8ae77ff2ef15aedc66fd5a7d9 212 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_06170 c918fee8ae77ff2ef15aedc66fd5a7d9 212 SUPERFAMILY SSF55120 6 195 3.2E-52 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_07975 664002e820425bef0f8564980469d8a6 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 4.9E-72 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07975 664002e820425bef0f8564980469d8a6 159 SUPERFAMILY SSF55040 11 155 8.63E-62 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07975 664002e820425bef0f8564980469d8a6 159 Gene3D G3DSA:3.30.70.640 1 158 2.1E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07975 664002e820425bef0f8564980469d8a6 159 Pfam PF01967 MoaC family 15 150 1.8E-56 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_07975 664002e820425bef0f8564980469d8a6 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.038 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DDU33_03820 3a30868980b001ee4d5558226a72c431 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.487 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DDU33_03820 3a30868980b001ee4d5558226a72c431 314 Gene3D G3DSA:3.40.1010.20 6 282 1.6E-111 T 14-10-2018 DDU33_03820 3a30868980b001ee4d5558226a72c431 314 Pfam PF02401 LytB protein 3 282 3.6E-91 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DDU33_03820 3a30868980b001ee4d5558226a72c431 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 2.3E-100 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DDU33_03820 3a30868980b001ee4d5558226a72c431 314 Gene3D G3DSA:3.40.50.11270 12 96 1.6E-111 T 14-10-2018 DDU33_03820 3a30868980b001ee4d5558226a72c431 314 Gene3D G3DSA:3.40.1010.20 97 196 1.6E-111 T 14-10-2018 DDU33_07185 948a7ea83da2ad2ea4bb45a57e549809 531 Pfam PF02652 L-lactate permease 4 522 8.9E-156 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DDU33_07185 948a7ea83da2ad2ea4bb45a57e549809 531 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 3 525 1.5E-152 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 SUPERFAMILY SSF55486 19 674 4.25E-194 T 14-10-2018 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 Pfam PF01431 Peptidase family M13 469 670 9.1E-67 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 Gene3D G3DSA:1.10.1380.10 63 456 5.0E-208 T 14-10-2018 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 Pfam PF05649 Peptidase family M13 37 413 2.4E-86 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 Gene3D G3DSA:3.40.390.10 32 674 5.0E-208 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 461 473 3.3E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 500 516 3.3E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 479 491 3.3E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DDU33_04155 731d5b26ef1b9bf536d9c3fc519ef591 674 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 571 582 3.3E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DDU33_00640 57e1e0543633e22a7876f40989c81edf 137 SMART SM00363 14 77 9.0E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_00640 57e1e0543633e22a7876f40989c81edf 137 Pfam PF01479 S4 domain 15 60 3.5E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_00640 57e1e0543633e22a7876f40989c81edf 137 SUPERFAMILY SSF55174 13 107 3.14E-29 T 14-10-2018 DDU33_00640 57e1e0543633e22a7876f40989c81edf 137 PIRSF PIRSF016821 11 137 7.3E-46 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 DDU33_00640 57e1e0543633e22a7876f40989c81edf 137 Gene3D G3DSA:3.10.290.10 6 113 2.2E-37 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DDU33_03085 eb41e95acf5ff130c1bbd5c74b8b96b6 121 Pfam PF01638 HxlR-like helix-turn-helix 27 112 4.5E-30 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DDU33_03085 eb41e95acf5ff130c1bbd5c74b8b96b6 121 Gene3D G3DSA:1.10.10.10 1 121 1.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_03085 eb41e95acf5ff130c1bbd5c74b8b96b6 121 SUPERFAMILY SSF46785 14 118 7.66E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_09980 89e4fd29d0856c1e442f8d750a941e6e 320 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 320 53.192 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 DDU33_09980 89e4fd29d0856c1e442f8d750a941e6e 320 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 319 3.7E-143 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 DDU33_09980 89e4fd29d0856c1e442f8d750a941e6e 320 Pfam PF08003 Protein of unknown function (DUF1698) 7 319 8.3E-167 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like DDU33_09980 89e4fd29d0856c1e442f8d750a941e6e 320 SUPERFAMILY SSF53335 89 316 6.37E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_09980 89e4fd29d0856c1e442f8d750a941e6e 320 Gene3D G3DSA:3.40.50.150 98 294 1.3E-22 T 14-10-2018 DDU33_09210 c6d10bd96bca2e0bea0622b096a4fd91 285 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 1 218 3.3E-81 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DDU33_09210 c6d10bd96bca2e0bea0622b096a4fd91 285 PIRSF PIRSF015582 1 285 2.3E-74 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like DDU33_09210 c6d10bd96bca2e0bea0622b096a4fd91 285 Gene3D G3DSA:3.20.20.60 1 282 9.1E-88 T 14-10-2018 DDU33_09210 c6d10bd96bca2e0bea0622b096a4fd91 285 SUPERFAMILY SSF51621 1 228 1.3E-57 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DDU33_09210 c6d10bd96bca2e0bea0622b096a4fd91 285 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 1 280 1.1E-139 T 14-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 DDU33_08060 62edbf8512c866e523c49324773a2521 346 Pfam PF12760 Transposase zinc-ribbon domain 23 72 1.5E-13 T 14-10-2018 IPR024442 Transposase, zinc-ribbon DDU33_08060 62edbf8512c866e523c49324773a2521 346 SMART SM01126 140 304 1.1E-47 T 14-10-2018 IPR024445 ISXO2-like transposase domain DDU33_08060 62edbf8512c866e523c49324773a2521 346 Pfam PF12762 ISXO2-like transposase domain 141 304 6.4E-42 T 14-10-2018 IPR024445 ISXO2-like transposase domain DDU33_02835 cb56d58c0179b8a445155993a1442a65 375 SUPERFAMILY SSF51395 2 329 1.52E-84 T 14-10-2018 DDU33_02835 cb56d58c0179b8a445155993a1442a65 375 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 331 4.3E-69 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DDU33_02835 cb56d58c0179b8a445155993a1442a65 375 Gene3D G3DSA:3.20.20.70 1 360 9.8E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_05425 d0fe63a28b6c7e89ba71c26b70193885 328 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 308 4.5E-10 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_05425 d0fe63a28b6c7e89ba71c26b70193885 328 Gene3D G3DSA:3.30.360.10 128 309 2.5E-51 T 14-10-2018 DDU33_05425 d0fe63a28b6c7e89ba71c26b70193885 328 Gene3D G3DSA:3.40.50.720 10 321 2.5E-51 T 14-10-2018 DDU33_05425 d0fe63a28b6c7e89ba71c26b70193885 328 SUPERFAMILY SSF55347 129 310 1.45E-31 T 14-10-2018 DDU33_05425 d0fe63a28b6c7e89ba71c26b70193885 328 PIRSF PIRSF000148 3 327 1.2E-52 T 14-10-2018 DDU33_05425 d0fe63a28b6c7e89ba71c26b70193885 328 SUPERFAMILY SSF51735 17 154 2.36E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_08925 67dcf887bb22281ce6bc10848b6c8e4f 93 Pfam PF04977 Septum formation initiator 11 89 2.1E-25 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC DDU33_08925 67dcf887bb22281ce6bc10848b6c8e4f 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 32.46 T 14-10-2018 IPR023081 Cell division protein FtsB DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 129 1.7E-46 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 Gene3D G3DSA:1.10.1200.120 3 130 1.7E-42 T 14-10-2018 IPR036019 Gated mechanosensitive channel DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 SUPERFAMILY SSF81330 13 125 2.75E-34 T 14-10-2018 IPR036019 Gated mechanosensitive channel DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 129 7.4E-46 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 130 23.833 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 6.7E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 6.7E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DDU33_02620 03f2d48bf709a92db4675b10d67cd3f5 130 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 6.7E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 Pfam PF00764 Arginosuccinate synthase 17 408 4.5E-60 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 18 26 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 SUPERFAMILY SSF69864 191 435 1.57E-79 T 14-10-2018 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 Gene3D G3DSA:1.10.287.400 378 441 6.8E-30 T 14-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 SUPERFAMILY SSF52402 6 188 1.13E-31 T 14-10-2018 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 130 141 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 Hamap MF_00581 Argininosuccinate synthase [argG]. 2 443 69.182 T 14-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 Gene3D G3DSA:3.90.1260.10 75 368 2.5E-117 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 Gene3D G3DSA:3.40.50.620 15 192 2.5E-117 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_10130 bbedc7002ed1e8a2c32179ef74eb12ef 443 TIGRFAM TIGR00032 argG: argininosuccinate synthase 14 420 3.6E-166 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DDU33_09780 d6e4bafa5520b131501f04b27064cadb 128 Pfam PF01381 Helix-turn-helix 7 61 3.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_09780 d6e4bafa5520b131501f04b27064cadb 128 ProDom PD740661 HI1458 EAG0009 55 124 2.0E-12 T 14-10-2018 DDU33_09780 d6e4bafa5520b131501f04b27064cadb 128 SUPERFAMILY SSF47413 3 64 3.66E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_09780 d6e4bafa5520b131501f04b27064cadb 128 Gene3D G3DSA:1.10.260.40 2 116 1.2E-15 T 14-10-2018 DDU33_09780 d6e4bafa5520b131501f04b27064cadb 128 SMART SM00530 6 61 4.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 Gene3D G3DSA:1.10.8.60 185 258 5.0E-32 T 14-10-2018 DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 Gene3D G3DSA:1.10.10.10 260 331 5.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.0E-149 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 332 181.975 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 SUPERFAMILY SSF46785 260 329 1.72E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 Gene3D G3DSA:3.40.50.300 23 184 3.8E-39 T 14-10-2018 DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 SUPERFAMILY SSF52540 23 254 3.44E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 SMART SM00382 54 181 7.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.6E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 328 6.0E-34 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DDU33_06155 9587a038563271ddac325fa9beb83aaf 332 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 6.8E-117 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DDU33_00990 ab935e00dedf8adc4e5939fe5e617157 203 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 1 183 8.4E-98 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 DDU33_00990 ab935e00dedf8adc4e5939fe5e617157 203 PIRSF PIRSF000013 1 192 1.3E-93 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 DDU33_00990 ab935e00dedf8adc4e5939fe5e617157 203 SUPERFAMILY SSF48695 8 186 1.57E-59 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DDU33_00990 ab935e00dedf8adc4e5939fe5e617157 203 Gene3D G3DSA:1.10.3820.10 10 188 4.6E-37 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily DDU33_00990 ab935e00dedf8adc4e5939fe5e617157 203 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 13 182 3.1E-72 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal DDU33_04500 33f4e69949e18db15deca0c66e20a50f 97 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 94 1.6E-15 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DDU33_00050 ef1e2d9a2f7d1f32374b6bf9f439928d 464 Pfam PF16325 Peptidase family U32 C-terminal domain 369 451 7.6E-17 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal DDU33_00050 ef1e2d9a2f7d1f32374b6bf9f439928d 464 Pfam PF01136 Peptidase family U32 79 353 4.2E-95 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DDU33_00050 ef1e2d9a2f7d1f32374b6bf9f439928d 464 ProSitePatterns PS01276 Peptidase family U32 signature. 166 184 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DDU33_00050 ef1e2d9a2f7d1f32374b6bf9f439928d 464 Gene3D G3DSA:2.40.30.10 365 451 5.4E-9 T 14-10-2018 DDU33_04250 232674b9052cabe7c10c1928dc122b08 107 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 43 95 5.0E-17 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DDU33_04250 232674b9052cabe7c10c1928dc122b08 107 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 35 100 3.4E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DDU33_04250 232674b9052cabe7c10c1928dc122b08 107 Pfam PF01809 Haemolytic domain 30 95 2.2E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DDU33_04250 232674b9052cabe7c10c1928dc122b08 107 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 28 96 24.591 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DDU33_04250 232674b9052cabe7c10c1928dc122b08 107 SMART SM01234 28 95 5.6E-44 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DDU33_09525 fef0a30bc38ccfcfc03e4412c5e35d39 265 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_09525 fef0a30bc38ccfcfc03e4412c5e35d39 265 Gene3D G3DSA:3.40.50.300 1 258 1.0E-56 T 14-10-2018 DDU33_09525 fef0a30bc38ccfcfc03e4412c5e35d39 265 SUPERFAMILY SSF52540 2 234 6.81E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_09525 fef0a30bc38ccfcfc03e4412c5e35d39 265 SMART SM00382 31 226 7.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_09525 fef0a30bc38ccfcfc03e4412c5e35d39 265 Pfam PF00005 ABC transporter 22 177 3.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 SUPERFAMILY SSF52374 19 185 2.64E-32 T 14-10-2018 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 Pfam PF01687 Riboflavin kinase 193 313 1.0E-36 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 PIRSF PIRSF004491 1 320 1.0E-102 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 SUPERFAMILY SSF82114 184 316 1.02E-45 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 Gene3D G3DSA:2.40.30.30 197 320 6.1E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 SMART SM00904 192 315 9.3E-59 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 Pfam PF06574 FAD synthetase 17 175 2.1E-53 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 Gene3D G3DSA:3.40.50.620 5 195 9.9E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_05215 c6908231f3b4f5cc1d036086c80ee743 321 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 22 315 2.6E-101 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DDU33_00125 056c87b1841d5107e6cf80dae364dddf 324 Gene3D G3DSA:1.10.3290.10 22 260 2.5E-50 T 14-10-2018 IPR036597 Fido-like domain superfamily DDU33_00125 056c87b1841d5107e6cf80dae364dddf 324 SUPERFAMILY SSF140931 74 244 1.57E-39 T 14-10-2018 IPR036597 Fido-like domain superfamily DDU33_00125 056c87b1841d5107e6cf80dae364dddf 324 Pfam PF02661 Fic/DOC family 94 191 6.8E-19 T 14-10-2018 IPR003812 Fido domain DDU33_07865 87e67acbe24b4039d5b1a7ff89f2e4cc 278 Pfam PF05944 Phage small terminase subunit 42 170 8.9E-40 T 14-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 DDU33_06640 ec367b674f323a2d63bd233b31dada75 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 170 307 4.9E-12 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DDU33_06640 ec367b674f323a2d63bd233b31dada75 344 Gene3D G3DSA:3.40.50.2000 32 99 4.5E-5 T 14-10-2018 DDU33_06640 ec367b674f323a2d63bd233b31dada75 344 Gene3D G3DSA:3.40.50.2000 178 319 2.5E-13 T 14-10-2018 DDU33_06640 ec367b674f323a2d63bd233b31dada75 344 SUPERFAMILY SSF53756 25 302 1.1E-34 T 14-10-2018 DDU33_10410 ce12acb7d57e6778732d5f91553ea735 125 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 120 1.8E-45 T 14-10-2018 IPR009387 Toxin HigB-2 DDU33_10410 ce12acb7d57e6778732d5f91553ea735 125 PIRSF PIRSF018634 1 124 1.0E-43 T 14-10-2018 IPR009387 Toxin HigB-2 DDU33_01750 9de1c652681f686c1ba8b6c96f719d52 232 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 232 112.981 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DDU33_01750 9de1c652681f686c1ba8b6c96f719d52 232 Pfam PF00149 Calcineurin-like phosphoesterase 2 197 7.2E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDU33_01750 9de1c652681f686c1ba8b6c96f719d52 232 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 228 2.4E-104 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DDU33_01750 9de1c652681f686c1ba8b6c96f719d52 232 SUPERFAMILY SSF56300 2 214 1.03E-27 T 14-10-2018 DDU33_04745 7a396bbf7e590a54f24d4e880a1b4652 199 Gene3D G3DSA:3.20.10.10 80 184 1.7E-21 T 14-10-2018 DDU33_04745 7a396bbf7e590a54f24d4e880a1b4652 199 SUPERFAMILY SSF56752 6 184 1.83E-26 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DDU33_04745 7a396bbf7e590a54f24d4e880a1b4652 199 Gene3D G3DSA:3.30.470.10 1 79 2.5E-26 T 14-10-2018 DDU33_04745 7a396bbf7e590a54f24d4e880a1b4652 199 Pfam PF01063 Amino-transferase class IV 105 184 4.2E-10 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DDU33_02795 969cc8c66dd61f9404f7a1a10ebf9743 147 SUPERFAMILY SSF54427 23 136 8.78E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily DDU33_02795 969cc8c66dd61f9404f7a1a10ebf9743 147 Pfam PF12680 SnoaL-like domain 32 129 3.1E-13 T 14-10-2018 IPR037401 SnoaL-like domain DDU33_02795 969cc8c66dd61f9404f7a1a10ebf9743 147 Gene3D G3DSA:3.10.450.50 19 147 4.0E-36 T 14-10-2018 DDU33_05525 24d11f1e35b2f849b1f232a066b01d2a 411 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 410 35.463 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 DDU33_05525 24d11f1e35b2f849b1f232a066b01d2a 411 Pfam PF03116 NQR2, RnfD, RnfE family 41 403 3.1E-102 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 DDU33_05525 24d11f1e35b2f849b1f232a066b01d2a 411 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 406 7.1E-189 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 DDU33_05525 24d11f1e35b2f849b1f232a066b01d2a 411 PIRSF PIRSF016055 1 411 5.8E-186 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 DDU33_03050 d21ce7644db6967317bd7fd258a6a307 224 Pfam PF00881 Nitroreductase family 9 199 5.0E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DDU33_03050 d21ce7644db6967317bd7fd258a6a307 224 SUPERFAMILY SSF55469 3 219 4.45E-33 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDU33_03050 d21ce7644db6967317bd7fd258a6a307 224 Gene3D G3DSA:3.40.109.10 2 220 1.1E-50 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DDU33_02780 4077f99bd2f2244e846448eee7659c5a 280 PIRSF PIRSF016184 2 279 1.1E-62 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DDU33_02780 4077f99bd2f2244e846448eee7659c5a 280 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 278 9.0E-49 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DDU33_02780 4077f99bd2f2244e846448eee7659c5a 280 Gene3D G3DSA:3.10.310.10 3 123 1.1E-37 T 14-10-2018 DDU33_02780 4077f99bd2f2244e846448eee7659c5a 280 Pfam PF02567 Phenazine biosynthesis-like protein 10 274 6.8E-49 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DDU33_02780 4077f99bd2f2244e846448eee7659c5a 280 SUPERFAMILY SSF54506 4 277 6.63E-57 T 14-10-2018 DDU33_02780 4077f99bd2f2244e846448eee7659c5a 280 Gene3D G3DSA:3.10.310.10 124 268 3.7E-24 T 14-10-2018 DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 SUPERFAMILY SSF50249 7 71 4.97E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 105 435 2.2E-27 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 Gene3D G3DSA:3.40.1350.30 137 271 4.1E-111 T 14-10-2018 DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 27 431 1.5E-142 T 14-10-2018 DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 Gene3D G3DSA:2.40.50.140 1 90 9.8E-24 T 14-10-2018 DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 Gene3D G3DSA:3.40.50.150 91 433 4.1E-111 T 14-10-2018 DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 Pfam PF01938 TRAM domain 22 70 5.1E-7 T 14-10-2018 IPR002792 TRAM domain DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 SUPERFAMILY SSF53335 79 438 8.37E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site DDU33_10040 ee3632a0a6a7738ae67da45cfacd2c78 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 21 439 61.892 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 DDU33_09055 e21ee90c8d83e5f2f38e2ff0b80fc011 251 Pfam PF13649 Methyltransferase domain 42 139 3.6E-23 T 14-10-2018 DDU33_09055 e21ee90c8d83e5f2f38e2ff0b80fc011 251 Gene3D G3DSA:3.40.50.150 18 248 5.9E-46 T 14-10-2018 DDU33_09055 e21ee90c8d83e5f2f38e2ff0b80fc011 251 SUPERFAMILY SSF53335 14 237 2.3E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DDU33_04260 ad9eabd6f969649416b28789d741e7a3 314 SUPERFAMILY SSF103481 42 142 4.18E-13 T 14-10-2018 DDU33_04260 ad9eabd6f969649416b28789d741e7a3 314 Pfam PF00892 EamA-like transporter family 157 264 1.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_04260 ad9eabd6f969649416b28789d741e7a3 314 Pfam PF00892 EamA-like transporter family 7 139 2.1E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_05745 d13905c7aedf911fd1fbdd8e7172eb2e 287 Pfam PF05107 CRISPR-associated protein Cas7 5 274 1.7E-110 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C DDU33_05745 d13905c7aedf911fd1fbdd8e7172eb2e 287 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 6 286 1.1E-116 T 14-10-2018 IPR013418 CRISPR-associated protein Csd2 DDU33_05745 d13905c7aedf911fd1fbdd8e7172eb2e 287 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 3 274 2.8E-82 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C DDU33_09565 d08e1770f81c0275579faba9b4fa4796 320 SUPERFAMILY SSF161098 70 301 6.41E-12 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_09565 d08e1770f81c0275579faba9b4fa4796 320 Gene3D G3DSA:1.10.3720.10 64 309 3.2E-17 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_09565 d08e1770f81c0275579faba9b4fa4796 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 314 1.0E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_10195 9cd5a3f4eb183abf033b0cf3b1b231af 128 Pfam PF01228 Glycine radical 16 109 3.2E-21 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 DDU33_10195 9cd5a3f4eb183abf033b0cf3b1b231af 128 PIRSF PIRSF000378 2 128 8.0E-57 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DDU33_10195 9cd5a3f4eb183abf033b0cf3b1b231af 128 ProSitePatterns PS00850 Glycine radical domain signature. 98 106 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DDU33_10195 9cd5a3f4eb183abf033b0cf3b1b231af 128 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 128 1.5E-69 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DDU33_10195 9cd5a3f4eb183abf033b0cf3b1b231af 128 SUPERFAMILY SSF51998 66 127 9.16E-24 T 14-10-2018 DDU33_10195 9cd5a3f4eb183abf033b0cf3b1b231af 128 Gene3D G3DSA:3.20.70.20 60 128 4.6E-25 T 14-10-2018 DDU33_00760 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DDU33_00760 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 DDU33_10725 f31d769cdc6c4597a497f3ba10264ef7 141 Gene3D G3DSA:1.10.8.640 21 107 4.8E-32 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DDU33_10725 f31d769cdc6c4597a497f3ba10264ef7 141 Pfam PF03918 Cytochrome C biogenesis protein 11 135 8.1E-43 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family DDU33_10725 f31d769cdc6c4597a497f3ba10264ef7 141 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 7 130 2.2E-55 T 14-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Gene3D G3DSA:3.40.50.12320 172 316 7.0E-40 T 14-10-2018 DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 SUPERFAMILY SSF55729 342 494 6.97E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Pfam PF05127 Helicase 177 326 1.4E-36 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Gene3D G3DSA:3.40.50.11040 7 170 1.8E-29 T 14-10-2018 DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Gene3D G3DSA:3.40.630.30 318 509 7.5E-60 T 14-10-2018 DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 11 620 40.456 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Pfam PF13718 GNAT acetyltransferase 2 344 454 2.2E-12 T 14-10-2018 IPR000182 GNAT domain DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Pfam PF17176 tRNA-binding domain 515 621 1.4E-16 T 14-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 SUPERFAMILY SSF52540 105 274 1.8E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 Gene3D G3DSA:1.20.120.890 510 622 4.1E-15 T 14-10-2018 IPR038321 TmcA, C-terminal domain superfamily DDU33_08380 73e95dcbd9e9e0a4b31774c5cd2f04ee 622 SMART SM00382 171 307 0.0027 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_08600 2cfc72a913e8692792d2be97d816589a 316 Pfam PF01032 FecCD transport family 12 312 3.4E-69 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DDU33_08600 2cfc72a913e8692792d2be97d816589a 316 Gene3D G3DSA:1.10.3470.10 1 315 7.0E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_08600 2cfc72a913e8692792d2be97d816589a 316 SUPERFAMILY SSF81345 4 312 2.09E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_00465 a534ba51e7c18ecb974719a6f1a62330 258 Pfam PF02405 Permease MlaE 44 254 2.1E-74 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DDU33_00465 a534ba51e7c18ecb974719a6f1a62330 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 256 1.5E-100 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DDU33_10730 ee4c9490f35603c7a5a20ed939eeb025 248 SUPERFAMILY SSF48452 116 234 4.55E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10730 ee4c9490f35603c7a5a20ed939eeb025 248 Pfam PF13181 Tetratricopeptide repeat 127 152 0.17 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_10730 ee4c9490f35603c7a5a20ed939eeb025 248 Gene3D G3DSA:1.25.40.10 108 248 1.0E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_10730 ee4c9490f35603c7a5a20ed939eeb025 248 SMART SM00028 196 229 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_10730 ee4c9490f35603c7a5a20ed939eeb025 248 SMART SM00028 125 158 0.099 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 PRINTS PR00474 Glutamate 5-kinase family signature 181 208 1.4E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 PRINTS PR00474 Glutamate 5-kinase family signature 149 170 1.4E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 1.4E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 PRINTS PR00474 Glutamate 5-kinase family signature 234 254 1.4E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 Pfam PF00696 Amino acid kinase family 26 260 3.4E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 PIRSF PIRSF000728 11 284 9.7E-97 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 Gene3D G3DSA:3.40.1160.10 2 284 8.8E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 259 3.0E-69 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 Hamap MF_00082 Acetylglutamate kinase [argB]. 25 277 46.609 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DDU33_05955 a9bfb84ca0ad0a673b7a9c6c5af69374 284 SUPERFAMILY SSF53633 6 283 6.15E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DDU33_05880 7aa836f3909c38f024bc03088455a75d 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_05880 7aa836f3909c38f024bc03088455a75d 254 Gene3D G3DSA:3.40.50.300 1 253 6.3E-65 T 14-10-2018 DDU33_05880 7aa836f3909c38f024bc03088455a75d 254 Pfam PF00005 ABC transporter 17 165 3.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_05880 7aa836f3909c38f024bc03088455a75d 254 SUPERFAMILY SSF52540 3 231 2.93E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05880 7aa836f3909c38f024bc03088455a75d 254 SMART SM00382 26 214 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_02665 53a8609b8904cb16e776c2ab8056177f 231 Hamap MF_01385 Urease accessory protein UreF [ureF]. 7 231 26.807 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DDU33_02665 53a8609b8904cb16e776c2ab8056177f 231 PIRSF PIRSF009467 4 231 5.6E-71 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DDU33_02665 53a8609b8904cb16e776c2ab8056177f 231 Gene3D G3DSA:1.10.4190.10 3 209 3.6E-62 T 14-10-2018 IPR038277 UreF domain superfamily DDU33_02665 53a8609b8904cb16e776c2ab8056177f 231 Pfam PF01730 UreF 39 188 3.4E-31 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DDU33_10215 d4e6433053250fe3cf3cbb306f0225e4 183 Gene3D G3DSA:1.10.3480.10 100 182 2.7E-8 T 14-10-2018 DDU33_10215 d4e6433053250fe3cf3cbb306f0225e4 183 Gene3D G3DSA:1.10.3480.10 3 99 3.4E-7 T 14-10-2018 DDU33_10215 d4e6433053250fe3cf3cbb306f0225e4 183 SUPERFAMILY SSF89155 3 181 1.57E-35 T 14-10-2018 IPR036411 TorD-like superfamily DDU33_10215 d4e6433053250fe3cf3cbb306f0225e4 183 PIRSF PIRSF004690 1 183 3.6E-48 T 14-10-2018 IPR026269 Tat proofreading chaperone DmsD-type DDU33_01670 6cf3169ee9ade2a51e56c8d1ff74875d 397 Pfam PF08007 Cupin superfamily protein 13 321 6.9E-91 T 14-10-2018 IPR003347 JmjC domain DDU33_01670 6cf3169ee9ade2a51e56c8d1ff74875d 397 Gene3D G3DSA:2.60.120.650 1 211 7.0E-68 T 14-10-2018 DDU33_01670 6cf3169ee9ade2a51e56c8d1ff74875d 397 SUPERFAMILY SSF51197 7 284 1.35E-61 T 14-10-2018 DDU33_01670 6cf3169ee9ade2a51e56c8d1ff74875d 397 SMART SM00558 88 222 2.3E-8 T 14-10-2018 IPR003347 JmjC domain DDU33_01670 6cf3169ee9ade2a51e56c8d1ff74875d 397 Gene3D G3DSA:1.10.10.2510 212 394 1.0E-13 T 14-10-2018 DDU33_03645 fa060d1df4b6a1d68cb0103c993990bc 240 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 59 178 1.9E-44 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 DDU33_03645 fa060d1df4b6a1d68cb0103c993990bc 240 SUPERFAMILY SSF69593 4 238 4.32E-56 T 14-10-2018 DDU33_03645 fa060d1df4b6a1d68cb0103c993990bc 240 SMART SM00563 65 180 1.7E-38 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DDU33_03645 fa060d1df4b6a1d68cb0103c993990bc 240 Pfam PF01553 Acyltransferase 62 178 2.2E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DDU33_06605 e2b8821e4603bb39bda9717dc35e4b6f 219 Gene3D G3DSA:2.160.10.10 1 201 3.4E-68 T 14-10-2018 DDU33_06605 e2b8821e4603bb39bda9717dc35e4b6f 219 SMART SM01266 5 58 4.3E-12 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DDU33_06605 e2b8821e4603bb39bda9717dc35e4b6f 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 1.2E-13 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_06605 e2b8821e4603bb39bda9717dc35e4b6f 219 SUPERFAMILY SSF51161 2 195 1.52E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_06605 e2b8821e4603bb39bda9717dc35e4b6f 219 Pfam PF12464 Maltose acetyltransferase 7 55 1.7E-10 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DDU33_06605 e2b8821e4603bb39bda9717dc35e4b6f 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_00800 3f5ec8c6f27cb65e549aacbdad9b9da4 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 396 1.6E-155 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DDU33_00800 3f5ec8c6f27cb65e549aacbdad9b9da4 401 Pfam PF03616 Sodium/glutamate symporter 2 366 6.3E-164 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DDU33_00800 3f5ec8c6f27cb65e549aacbdad9b9da4 401 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 1 397 23.386 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DDU33_05520 339e21cbfdb46d8ec4b4008a91c54dc2 449 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 260 3.3E-117 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 DDU33_05520 339e21cbfdb46d8ec4b4008a91c54dc2 449 Pfam PF11973 NQRA C-terminal domain 265 313 2.3E-23 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 DDU33_05520 339e21cbfdb46d8ec4b4008a91c54dc2 449 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 449 46.554 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 DDU33_05520 339e21cbfdb46d8ec4b4008a91c54dc2 449 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 449 2.1E-199 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 DDU33_06925 d84dd5450191cd56ae814a9e104f2268 399 Gene3D G3DSA:1.20.1720.10 10 389 6.4E-94 T 14-10-2018 DDU33_06925 d84dd5450191cd56ae814a9e104f2268 399 SUPERFAMILY SSF103473 4 391 1.44E-62 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_06925 d84dd5450191cd56ae814a9e104f2268 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 389 3.4E-123 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DDU33_06925 d84dd5450191cd56ae814a9e104f2268 399 Pfam PF07690 Major Facilitator Superfamily 16 357 5.7E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_09635 59886a3e27ca2418bd8085944bb699f7 356 Gene3D G3DSA:3.40.50.1820 18 344 2.3E-136 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_09635 59886a3e27ca2418bd8085944bb699f7 356 SUPERFAMILY SSF53474 5 355 9.93E-100 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_09635 59886a3e27ca2418bd8085944bb699f7 356 Pfam PF00561 alpha/beta hydrolase fold 40 341 3.0E-42 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DDU33_09635 59886a3e27ca2418bd8085944bb699f7 356 Gene3D G3DSA:1.10.1740.110 172 275 2.3E-136 T 14-10-2018 DDU33_09635 59886a3e27ca2418bd8085944bb699f7 356 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 10 354 1.6E-134 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DDU33_09635 59886a3e27ca2418bd8085944bb699f7 356 PIRSF PIRSF000443 3 356 1.3E-122 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DDU33_09635 59886a3e27ca2418bd8085944bb699f7 356 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 2 355 29.642 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DDU33_07395 59c2c7519acd323d64697eb5214856bc 270 Pfam PF00149 Calcineurin-like phosphoesterase 3 163 2.2E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DDU33_07395 59c2c7519acd323d64697eb5214856bc 270 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 268 3.8E-132 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DDU33_07395 59c2c7519acd323d64697eb5214856bc 270 PIRSF PIRSF000903 1 270 9.0E-118 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DDU33_07395 59c2c7519acd323d64697eb5214856bc 270 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 270 45.501 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DDU33_07395 59c2c7519acd323d64697eb5214856bc 270 Gene3D G3DSA:3.60.21.10 1 269 6.1E-81 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DDU33_07395 59c2c7519acd323d64697eb5214856bc 270 SUPERFAMILY SSF56300 1 259 3.3E-58 T 14-10-2018 DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 SUPERFAMILY SSF54631 66 202 5.81E-30 T 14-10-2018 DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 SUPERFAMILY SSF56176 205 289 1.55E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 Gene3D G3DSA:3.30.465.10 201 293 2.5E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 Pfam PF00571 CBS domain 70 128 4.4E-8 T 14-10-2018 IPR000644 CBS domain DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 Pfam PF00571 CBS domain 142 191 1.1E-4 T 14-10-2018 IPR000644 CBS domain DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 SMART SM01091 207 285 2.6E-25 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 Gene3D G3DSA:3.10.580.10 49 200 1.8E-52 T 14-10-2018 DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 SMART SM00116 79 129 1.0 T 14-10-2018 IPR000644 CBS domain DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 SMART SM00116 143 191 0.11 T 14-10-2018 IPR000644 CBS domain DDU33_09735 0e6f79ea28a189949ea137067f1564ca 301 Pfam PF03471 Transporter associated domain 208 283 1.1E-18 T 14-10-2018 IPR005170 Transporter-associated domain DDU33_09450 1b1d6c670d2f97a18b971caefa4444e0 289 SUPERFAMILY SSF103481 65 139 1.19E-5 T 14-10-2018 DDU33_09450 1b1d6c670d2f97a18b971caefa4444e0 289 SUPERFAMILY SSF103481 186 283 7.06E-6 T 14-10-2018 DDU33_05080 cd606798eb3598911ed8678815a21e5a 537 Pfam PF03734 L,D-transpeptidase catalytic domain 301 465 1.0E-28 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DDU33_05080 cd606798eb3598911ed8678815a21e5a 537 SUPERFAMILY SSF141523 301 457 8.63E-20 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DDU33_09015 c07056e69ba99ba160686943a8b88930 84 Pfam PF01206 Sulfurtransferase TusA 14 80 5.0E-9 T 14-10-2018 IPR001455 TusA-like domain DDU33_09015 c07056e69ba99ba160686943a8b88930 84 SUPERFAMILY SSF64307 10 80 2.35E-10 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_09015 c07056e69ba99ba160686943a8b88930 84 Gene3D G3DSA:3.30.110.40 2 82 4.3E-7 T 14-10-2018 IPR036868 TusA-like domain superfamily DDU33_01795 9f690abdd35012d7e449726b0f6a60b5 285 SUPERFAMILY SSF52096 16 280 1.8E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_01795 9f690abdd35012d7e449726b0f6a60b5 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 4.6E-148 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DDU33_01795 9f690abdd35012d7e449726b0f6a60b5 285 Gene3D G3DSA:1.10.12.10 223 273 1.1E-30 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DDU33_01795 9f690abdd35012d7e449726b0f6a60b5 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.887 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DDU33_01795 9f690abdd35012d7e449726b0f6a60b5 285 Gene3D G3DSA:3.90.226.10 1 222 9.5E-87 T 14-10-2018 DDU33_01795 9f690abdd35012d7e449726b0f6a60b5 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 1.5E-80 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DDU33_01795 9f690abdd35012d7e449726b0f6a60b5 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DDU33_07090 c219bce7ccf47a4f95abb26c186dab13 266 SUPERFAMILY SSF88713 13 226 1.62E-61 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DDU33_07090 c219bce7ccf47a4f95abb26c186dab13 266 Pfam PF04748 Divergent polysaccharide deacetylase 16 225 3.5E-67 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase DDU33_07090 c219bce7ccf47a4f95abb26c186dab13 266 Gene3D G3DSA:3.20.20.370 5 234 3.5E-65 T 14-10-2018 DDU33_07845 fc5af76f3919b3ab914048ef8a09d677 342 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 46 329 1.6E-100 T 14-10-2018 IPR006430 Phage portal protein PBSX family DDU33_07845 fc5af76f3919b3ab914048ef8a09d677 342 Pfam PF04860 Phage portal protein 91 337 2.4E-13 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein DDU33_07845 fc5af76f3919b3ab914048ef8a09d677 342 PIRSF PIRSF018494 1 342 4.9E-135 T 14-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria DDU33_04255 d6e6cb97fdc3ea2ba26b240504e296cd 209 Pfam PF04391 Protein of unknown function (DUF533) 34 207 9.2E-48 T 14-10-2018 IPR007486 Inner membrane protein YebE DDU33_04255 d6e6cb97fdc3ea2ba26b240504e296cd 209 SUPERFAMILY SSF158682 65 207 6.28E-22 T 14-10-2018 IPR029024 TerB-like DDU33_04255 d6e6cb97fdc3ea2ba26b240504e296cd 209 Gene3D G3DSA:1.10.3680.10 76 208 1.0E-11 T 14-10-2018 IPR029024 TerB-like DDU33_09380 49aa00ad15e51fefe6fb3a519bd806d0 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.1E-29 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDU33_09380 49aa00ad15e51fefe6fb3a519bd806d0 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 6.3E-31 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDU33_09380 49aa00ad15e51fefe6fb3a519bd806d0 64 PIRSF PIRSF039003 1 64 1.9E-29 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DDU33_09380 49aa00ad15e51fefe6fb3a519bd806d0 64 Gene3D G3DSA:1.10.10.600 1 64 5.6E-29 T 14-10-2018 IPR036762 IscX-like superfamily DDU33_09380 49aa00ad15e51fefe6fb3a519bd806d0 64 SUPERFAMILY SSF140319 1 63 4.71E-25 T 14-10-2018 IPR036762 IscX-like superfamily DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 Pfam PF13377 Periplasmic binding protein-like domain 174 331 3.2E-23 T 14-10-2018 DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 Gene3D G3DSA:1.10.260.40 1 64 3.4E-16 T 14-10-2018 DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 SUPERFAMILY SSF47413 5 64 1.59E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.2E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 SUPERFAMILY SSF53822 63 318 1.05E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 SMART SM00354 6 76 2.9E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 Gene3D G3DSA:3.40.50.2300 68 310 7.2E-67 T 14-10-2018 DDU33_03145 8a2af7bd3a7c50ae349b0ea3d992c88e 332 Gene3D G3DSA:3.40.50.2300 162 294 7.2E-67 T 14-10-2018 DDU33_09810 25470d5f22543243717eeced10989f7a 151 Pfam PF03692 Putative zinc- or iron-chelating domain 30 100 7.3E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DDU33_09810 25470d5f22543243717eeced10989f7a 151 PIRSF PIRSF006173 4 151 6.6E-54 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 DDU33_10330 37ba7e903b71e7aa705e9d24637c87bf 310 Gene3D G3DSA:3.40.50.620 2 259 2.2E-49 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_10330 37ba7e903b71e7aa705e9d24637c87bf 310 PIRSF PIRSF004976 1 275 4.0E-76 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 DDU33_10330 37ba7e903b71e7aa705e9d24637c87bf 310 SUPERFAMILY SSF52402 17 236 1.66E-54 T 14-10-2018 DDU33_10330 37ba7e903b71e7aa705e9d24637c87bf 310 Pfam PF01171 PP-loop family 41 205 3.9E-15 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DDU33_10330 37ba7e903b71e7aa705e9d24637c87bf 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 10 271 57.789 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 DDU33_05050 f84cb237914e39c5809839fe919984c3 240 Gene3D G3DSA:3.40.190.10 25 236 4.0E-69 T 14-10-2018 DDU33_05050 f84cb237914e39c5809839fe919984c3 240 SUPERFAMILY SSF53850 1 239 9.83E-63 T 14-10-2018 DDU33_05050 f84cb237914e39c5809839fe919984c3 240 SMART SM00079 21 239 0.005 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DDU33_05050 f84cb237914e39c5809839fe919984c3 240 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 44 57 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site DDU33_05050 f84cb237914e39c5809839fe919984c3 240 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 237 5.8E-78 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 DDU33_05050 f84cb237914e39c5809839fe919984c3 240 SMART SM00062 21 240 4.8E-73 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDU33_05050 f84cb237914e39c5809839fe919984c3 240 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 238 1.1E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DDU33_05050 f84cb237914e39c5809839fe919984c3 240 Gene3D G3DSA:3.40.190.10 108 197 4.0E-69 T 14-10-2018 DDU33_03940 c186bf7f62ade8288bd65b0da719e781 123 Pfam PF04076 Bacterial OB fold (BOF) protein 26 122 8.2E-33 T 14-10-2018 IPR005220 Bacterial OB-fold DDU33_03940 c186bf7f62ade8288bd65b0da719e781 123 Gene3D G3DSA:2.40.50.200 19 123 4.1E-31 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DDU33_03940 c186bf7f62ade8288bd65b0da719e781 123 SUPERFAMILY SSF101756 27 120 6.28E-31 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DDU33_06975 041976a521d39c6517e97acec03475ad 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 426 1.0E-100 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDU33_06975 041976a521d39c6517e97acec03475ad 463 Pfam PF01554 MatE 21 180 8.4E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDU33_06975 041976a521d39c6517e97acec03475ad 463 Pfam PF01554 MatE 248 409 7.8E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDU33_06975 041976a521d39c6517e97acec03475ad 463 PIRSF PIRSF006603 10 460 3.3E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DDU33_06750 dd1b670eeb857e0649f8ee5fded3b362 253 Pfam PF00899 ThiF family 18 223 1.2E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDU33_06750 dd1b670eeb857e0649f8ee5fded3b362 253 SUPERFAMILY SSF69572 7 252 8.11E-66 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DDU33_06750 dd1b670eeb857e0649f8ee5fded3b362 253 Gene3D G3DSA:3.40.50.720 2 253 8.1E-103 T 14-10-2018 DDU33_01500 404cd5d04eea927b3c339c9efe0d4986 73 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 72 23.798 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DDU33_01500 404cd5d04eea927b3c339c9efe0d4986 73 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 2.7E-21 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DDU33_01500 404cd5d04eea927b3c339c9efe0d4986 73 Pfam PF02416 mttA/Hcf106 family 4 56 9.1E-14 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 SMART SM00244 83 243 4.8E-46 T 14-10-2018 IPR001107 Band 7 domain DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 PRINTS PR00721 Stomatin signature 172 189 4.5E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 PRINTS PR00721 Stomatin signature 137 158 4.5E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 PRINTS PR00721 Stomatin signature 90 112 4.5E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 TIGRFAM TIGR01933 hflK: HflK protein 85 344 6.8E-115 T 14-10-2018 IPR010201 HflK GO:0016021 DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 Pfam PF01145 SPFH domain / Band 7 family 87 258 1.2E-31 T 14-10-2018 IPR001107 Band 7 domain DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 Gene3D G3DSA:3.30.479.30 124 234 2.8E-20 T 14-10-2018 DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 Pfam PF12221 Bacterial membrane protein N terminal 1 53 1.6E-10 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal DDU33_10365 b50f7c9f506a9c4edafeac8007efd1e8 392 SUPERFAMILY SSF117892 116 248 1.83E-23 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DDU33_05670 8fd108807838306c2b8228a8fb065ac9 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 133 1.5E-35 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDU33_05670 8fd108807838306c2b8228a8fb065ac9 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 133 3.7E-42 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDU33_05670 8fd108807838306c2b8228a8fb065ac9 159 SUPERFAMILY SSF55083 4 156 5.89E-51 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDU33_05670 8fd108807838306c2b8228a8fb065ac9 159 Gene3D G3DSA:3.30.70.560 3 159 1.5E-53 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDU33_05670 8fd108807838306c2b8228a8fb065ac9 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DDU33_00105 f0ff83f5afd1210cf5e8cf0602360bd2 200 SUPERFAMILY SSF52016 2 194 3.92E-59 T 14-10-2018 DDU33_00105 f0ff83f5afd1210cf5e8cf0602360bd2 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.668 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DDU33_00105 f0ff83f5afd1210cf5e8cf0602360bd2 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.2E-104 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DDU33_00105 f0ff83f5afd1210cf5e8cf0602360bd2 200 Gene3D G3DSA:3.20.19.10 1 180 8.4E-75 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DDU33_00105 f0ff83f5afd1210cf5e8cf0602360bd2 200 Pfam PF00694 Aconitase C-terminal domain 2 125 1.3E-41 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 Pfam PF13174 Tetratricopeptide repeat 79 106 0.0044 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 Gene3D G3DSA:1.25.40.10 6 112 3.1E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 Gene3D G3DSA:1.25.40.10 113 171 1.7E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 SUPERFAMILY SSF48452 2 164 1.9E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 SMART SM00028 5 38 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 SMART SM00028 41 74 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 SMART SM00028 113 146 5.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 SMART SM00028 77 110 2.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DDU33_08155 a77a8ac4f753303dc843516c95597b4e 172 Pfam PF13432 Tetratricopeptide repeat 12 64 1.6E-4 T 14-10-2018 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 SUPERFAMILY SSF52540 4 169 5.18E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 Gene3D G3DSA:3.40.50.300 1 172 4.3E-58 T 14-10-2018 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.747 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 PRINTS PR01100 Shikimate kinase family signature 77 86 9.0E-29 T 14-10-2018 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 PRINTS PR01100 Shikimate kinase family signature 98 115 9.0E-29 T 14-10-2018 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 PRINTS PR01100 Shikimate kinase family signature 7 22 9.0E-29 T 14-10-2018 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 PRINTS PR01100 Shikimate kinase family signature 31 44 9.0E-29 T 14-10-2018 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 PRINTS PR01100 Shikimate kinase family signature 59 67 9.0E-29 T 14-10-2018 DDU33_06230 5dd568582457746ad42f0c6cd14a6f4d 173 Pfam PF01202 Shikimate kinase 13 169 5.8E-56 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DDU33_08065 843ea3daea8920bf728bc6137d635974 113 SMART SM00530 6 61 1.7E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_08065 843ea3daea8920bf728bc6137d635974 113 Pfam PF01381 Helix-turn-helix 15 61 5.8E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_08065 843ea3daea8920bf728bc6137d635974 113 SUPERFAMILY SSF47413 2 66 6.19E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_08065 843ea3daea8920bf728bc6137d635974 113 Gene3D G3DSA:1.10.260.40 2 71 1.7E-11 T 14-10-2018 DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 267 278 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 30 284 8.0E-114 T 14-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 Pfam PF12837 4Fe-4S binding domain 226 247 1.3E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 Pfam PF00037 4Fe-4S binding domain 266 280 8.5E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 Pfam PF12801 4Fe-4S binding domain 89 134 2.5E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 Pfam PF12801 4Fe-4S binding domain 184 218 4.4E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 Gene3D G3DSA:3.30.70.20 222 290 2.8E-8 T 14-10-2018 DDU33_01000 5874179bce432b7aa746bbd4896b692f 297 SUPERFAMILY SSF54862 101 289 1.84E-21 T 14-10-2018 DDU33_02800 992bd22707915faede0f7e3845d68902 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 3.0E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDU33_02800 992bd22707915faede0f7e3845d68902 94 SUPERFAMILY SSF143011 1 82 7.59E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DDU33_02800 992bd22707915faede0f7e3845d68902 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 1.5E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DDU33_02800 992bd22707915faede0f7e3845d68902 94 Gene3D G3DSA:3.30.2310.20 1 94 5.1E-29 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 230 252 2.2E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 2.2E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 277 2.2E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 2.2E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 84 106 2.2E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 106 133 2.2E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 SUPERFAMILY SSF55021 5 66 8.33E-8 T 14-10-2018 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 278 44.211 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 Pfam PF00551 Formyl transferase 83 260 3.0E-50 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 278 2.2E-128 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 PIRSF PIRSF036480 2 278 2.4E-110 T 14-10-2018 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 SUPERFAMILY SSF53328 83 277 1.83E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 Gene3D G3DSA:3.40.50.170 83 278 5.1E-65 T 14-10-2018 DDU33_09625 e93c023ffe70fe939e3b9f74d9bd57e0 278 Gene3D G3DSA:3.30.70.260 3 76 2.0E-14 T 14-10-2018 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 SUPERFAMILY SSF46689 239 284 4.39E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 SMART SM00342 203 286 3.6E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 Pfam PF12833 Helix-turn-helix domain 209 283 7.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 Pfam PF06719 AraC-type transcriptional regulator N-terminus 23 174 1.1E-40 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 Gene3D G3DSA:1.10.10.60 183 286 6.2E-28 T 14-10-2018 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 8.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 8.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DDU33_03035 33d56f3e061516e7aa6a550d916acdd4 288 SUPERFAMILY SSF46689 187 236 3.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_07000 64d41f20b07acd995764654c3f4dd96f 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 2.7E-21 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DDU33_07000 64d41f20b07acd995764654c3f4dd96f 329 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 200 1.2E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DDU33_07000 64d41f20b07acd995764654c3f4dd96f 329 SUPERFAMILY SSF55347 123 286 5.56E-19 T 14-10-2018 DDU33_07000 64d41f20b07acd995764654c3f4dd96f 329 SUPERFAMILY SSF51735 2 149 1.04E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_07000 64d41f20b07acd995764654c3f4dd96f 329 Gene3D G3DSA:3.40.50.720 1 131 3.9E-30 T 14-10-2018 DDU33_07000 64d41f20b07acd995764654c3f4dd96f 329 Gene3D G3DSA:3.30.360.10 132 323 1.7E-47 T 14-10-2018 DDU33_02160 6740c5aded659cca491a9fe804b07667 103 Pfam PF00467 KOW motif 9 37 8.5E-6 T 14-10-2018 IPR005824 KOW DDU33_02160 6740c5aded659cca491a9fe804b07667 103 SUPERFAMILY SSF50104 4 102 5.3E-33 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DDU33_02160 6740c5aded659cca491a9fe804b07667 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_02160 6740c5aded659cca491a9fe804b07667 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.1E-22 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02160 6740c5aded659cca491a9fe804b07667 103 SMART SM00739 4 31 9.4E-5 T 14-10-2018 IPR005824 KOW DDU33_02160 6740c5aded659cca491a9fe804b07667 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.3E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02160 6740c5aded659cca491a9fe804b07667 103 Gene3D G3DSA:2.30.30.30 2 103 4.0E-38 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DDU33_02160 6740c5aded659cca491a9fe804b07667 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.495 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_00135 877433f791978d960022b68e22f341ed 197 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 6.1E-55 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDU33_00135 877433f791978d960022b68e22f341ed 197 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 6.1E-55 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDU33_00135 877433f791978d960022b68e22f341ed 197 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 6.1E-55 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDU33_00135 877433f791978d960022b68e22f341ed 197 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 6.1E-55 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDU33_00135 877433f791978d960022b68e22f341ed 197 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 6.1E-55 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDU33_00135 877433f791978d960022b68e22f341ed 197 Gene3D G3DSA:3.90.226.10 1 195 1.7E-83 T 14-10-2018 DDU33_00135 877433f791978d960022b68e22f341ed 197 SUPERFAMILY SSF52096 10 194 3.91E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DDU33_00135 877433f791978d960022b68e22f341ed 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.622 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDU33_00135 877433f791978d960022b68e22f341ed 197 Pfam PF00574 Clp protease 13 192 7.9E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DDU33_00135 877433f791978d960022b68e22f341ed 197 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 1.6E-108 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DDU33_00135 877433f791978d960022b68e22f341ed 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 14-10-2018 IPR033135 ClpP, histidine active site DDU33_02465 db28b981d43a8dafd55c382b17a91ef6 105 Pfam PF13657 HipA N-terminal domain 9 101 1.7E-20 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 DDU33_02465 db28b981d43a8dafd55c382b17a91ef6 105 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 9 101 4.0E-20 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 DDU33_00635 d236dbffc5c244faea42537f925cf163 183 SUPERFAMILY SSF55811 5 179 1.76E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_00635 d236dbffc5c244faea42537f925cf163 183 Gene3D G3DSA:3.90.79.10 7 183 3.6E-45 T 14-10-2018 DDU33_00635 d236dbffc5c244faea42537f925cf163 183 Pfam PF00293 NUDIX domain 45 158 3.6E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDU33_07885 5b694a9fe95b66a157a5f6e6801b59e8 376 Pfam PF10758 Protein of unknown function (DUF2586) 2 370 5.4E-170 T 14-10-2018 IPR019694 Bacteriophage HP1, Orf23 DDU33_01600 7cdc65391dd10b95eb6a1f2045fb05dd 96 ProDom PD050153 PM1128 HI0234 52 95 4.0E-12 T 14-10-2018 IPR035318 Protein of unknown function DUF5377 DDU33_01600 7cdc65391dd10b95eb6a1f2045fb05dd 96 Pfam PF17347 Family of unknown function (DUF5377) 1 95 7.9E-48 T 14-10-2018 IPR035318 Protein of unknown function DUF5377 DDU33_10350 850943dda45c5026735e9a2577d98738 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 220.07 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DDU33_10350 850943dda45c5026735e9a2577d98738 483 SUPERFAMILY SSF143437 1 173 1.57E-47 T 14-10-2018 DDU33_10350 850943dda45c5026735e9a2577d98738 483 Gene3D G3DSA:3.40.50.620 175 396 2.2E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DDU33_10350 850943dda45c5026735e9a2577d98738 483 SMART SM00981 75 165 1.6E-22 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DDU33_10350 850943dda45c5026735e9a2577d98738 483 SUPERFAMILY SSF52402 174 372 4.85E-41 T 14-10-2018 DDU33_10350 850943dda45c5026735e9a2577d98738 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 5.5E-74 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 DDU33_10350 850943dda45c5026735e9a2577d98738 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 481 5.3E-41 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 DDU33_10350 850943dda45c5026735e9a2577d98738 483 SUPERFAMILY SSF52821 395 480 2.88E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DDU33_10350 850943dda45c5026735e9a2577d98738 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 369 5.0E-121 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DDU33_10350 850943dda45c5026735e9a2577d98738 483 Gene3D G3DSA:3.30.2130.30 1 174 7.4E-36 T 14-10-2018 DDU33_10350 850943dda45c5026735e9a2577d98738 483 Gene3D G3DSA:3.40.250.10 397 482 3.6E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DDU33_10350 850943dda45c5026735e9a2577d98738 483 Pfam PF02926 THUMP domain 29 162 1.0E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DDU33_07850 24bf859736a2636fd0d293727e84d3d9 601 Gene3D G3DSA:3.30.420.240 398 588 3.4E-12 T 14-10-2018 DDU33_07850 24bf859736a2636fd0d293727e84d3d9 601 Pfam PF17289 Terminase RNaseH-like domain 429 587 7.9E-39 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like DDU33_07850 24bf859736a2636fd0d293727e84d3d9 601 Gene3D G3DSA:3.40.50.300 96 321 2.7E-20 T 14-10-2018 DDU33_07850 24bf859736a2636fd0d293727e84d3d9 601 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 17 75 8.9E-20 T 14-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 DDU33_07850 24bf859736a2636fd0d293727e84d3d9 601 Pfam PF03237 Terminase-like family 180 400 5.9E-51 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type DDU33_06490 fe04b2c6c8de6d0fb1928c5801435e29 165 Pfam PF00210 Ferritin-like domain 7 143 1.4E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDU33_06490 fe04b2c6c8de6d0fb1928c5801435e29 165 Gene3D G3DSA:1.20.1260.10 1 165 8.3E-47 T 14-10-2018 IPR012347 Ferritin-like DDU33_06490 fe04b2c6c8de6d0fb1928c5801435e29 165 SUPERFAMILY SSF47240 1 159 1.94E-56 T 14-10-2018 IPR009078 Ferritin-like superfamily DDU33_08570 b30636fcbc9216499f83e55cc10ffc49 96 Gene3D G3DSA:3.10.510.20 5 79 1.0E-30 T 14-10-2018 IPR038068 YcgL-like superfamily DDU33_08570 b30636fcbc9216499f83e55cc10ffc49 96 SUPERFAMILY SSF160191 2 93 5.36E-39 T 14-10-2018 IPR038068 YcgL-like superfamily DDU33_08570 b30636fcbc9216499f83e55cc10ffc49 96 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 7 87 1.0E-26 T 14-10-2018 IPR027354 YcgL domain DDU33_08570 b30636fcbc9216499f83e55cc10ffc49 96 Hamap MF_01866 Protein YcgL [ycgL]. 6 93 27.198 T 14-10-2018 IPR027354 YcgL domain DDU33_08570 b30636fcbc9216499f83e55cc10ffc49 96 Pfam PF05166 YcgL domain 8 80 3.4E-33 T 14-10-2018 IPR027354 YcgL domain DDU33_01260 1400772b129e4fce1c9d3934ad5cc53b 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 393 5.7E-164 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DDU33_01260 1400772b129e4fce1c9d3934ad5cc53b 404 Gene3D G3DSA:3.40.50.10300 185 403 7.6E-84 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DDU33_01260 1400772b129e4fce1c9d3934ad5cc53b 404 SUPERFAMILY SSF52507 1 179 2.62E-59 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DDU33_01260 1400772b129e4fce1c9d3934ad5cc53b 404 Gene3D G3DSA:3.40.50.1950 1 184 1.1E-55 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DDU33_01260 1400772b129e4fce1c9d3934ad5cc53b 404 Pfam PF02441 Flavoprotein 5 178 1.9E-43 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DDU33_01260 1400772b129e4fce1c9d3934ad5cc53b 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 368 7.4E-74 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DDU33_01260 1400772b129e4fce1c9d3934ad5cc53b 404 SUPERFAMILY SSF102645 170 398 1.57E-78 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DDU33_00615 c18f9f75fb712af1a463d46f15ec4613 439 Gene3D G3DSA:1.20.1250.20 17 430 2.4E-70 T 14-10-2018 DDU33_00615 c18f9f75fb712af1a463d46f15ec4613 439 Pfam PF07690 Major Facilitator Superfamily 28 318 1.0E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DDU33_00615 c18f9f75fb712af1a463d46f15ec4613 439 SUPERFAMILY SSF103473 8 430 4.71E-78 T 14-10-2018 IPR036259 MFS transporter superfamily DDU33_00615 c18f9f75fb712af1a463d46f15ec4613 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDU33_00615 c18f9f75fb712af1a463d46f15ec4613 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DDU33_00855 6df38aa60068f5d24543cff4fe5b762a 210 Pfam PF00005 ABC transporter 17 156 2.1E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00855 6df38aa60068f5d24543cff4fe5b762a 210 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 5 208 1.2E-92 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 DDU33_00855 6df38aa60068f5d24543cff4fe5b762a 210 SUPERFAMILY SSF52540 5 208 1.66E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00855 6df38aa60068f5d24543cff4fe5b762a 210 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_00855 6df38aa60068f5d24543cff4fe5b762a 210 SMART SM00382 23 206 2.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00855 6df38aa60068f5d24543cff4fe5b762a 210 Gene3D G3DSA:3.40.50.300 3 210 1.3E-65 T 14-10-2018 DDU33_08800 52e2a69a7ca1d7a2cdad8b30b584de1c 350 Gene3D G3DSA:2.40.160.10 20 350 3.4E-50 T 14-10-2018 IPR023614 Porin domain superfamily DDU33_08800 52e2a69a7ca1d7a2cdad8b30b584de1c 350 Pfam PF13609 Gram-negative porin 8 322 2.0E-39 T 14-10-2018 DDU33_08800 52e2a69a7ca1d7a2cdad8b30b584de1c 350 SUPERFAMILY SSF56935 20 350 1.77E-53 T 14-10-2018 DDU33_06205 dddff9707f61b648d9c5a90ba94feefd 129 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 58 125 1.0E-12 T 14-10-2018 DDU33_09610 2cb87890684766a2781adc65b1e9b379 323 Pfam PF13407 Periplasmic binding protein domain 27 295 1.5E-50 T 14-10-2018 IPR025997 Periplasmic binding protein DDU33_09610 2cb87890684766a2781adc65b1e9b379 323 Gene3D G3DSA:3.40.50.2300 132 275 4.5E-93 T 14-10-2018 DDU33_09610 2cb87890684766a2781adc65b1e9b379 323 SUPERFAMILY SSF53822 26 321 1.68E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_09610 2cb87890684766a2781adc65b1e9b379 323 Gene3D G3DSA:3.40.50.2300 27 297 4.5E-93 T 14-10-2018 DDU33_01270 04f0132a620a3f859781cf5202a80ddf 391 Pfam PF01098 Cell cycle protein 25 380 3.9E-115 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01270 04f0132a620a3f859781cf5202a80ddf 391 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 378 2.0E-124 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01270 04f0132a620a3f859781cf5202a80ddf 391 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 21 389 38.551 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_01270 04f0132a620a3f859781cf5202a80ddf 391 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_04535 2f6aec60cbde36899c9cfb25233e276b 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.6E-114 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DDU33_04535 2f6aec60cbde36899c9cfb25233e276b 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 5.8E-73 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DDU33_00910 3423a86dda589df41caaa0d63742c8a3 212 SUPERFAMILY SSF52833 26 201 2.12E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_00910 3423a86dda589df41caaa0d63742c8a3 212 ProSitePatterns PS00194 Thioredoxin family active site. 47 65 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDU33_00910 3423a86dda589df41caaa0d63742c8a3 212 PIRSF PIRSF001488 1 212 1.9E-67 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DDU33_00910 3423a86dda589df41caaa0d63742c8a3 212 Gene3D G3DSA:3.40.30.10 3 124 5.9E-26 T 14-10-2018 DDU33_00910 3423a86dda589df41caaa0d63742c8a3 212 Gene3D G3DSA:3.40.30.10 125 212 2.3E-18 T 14-10-2018 DDU33_00910 3423a86dda589df41caaa0d63742c8a3 212 Pfam PF01323 DSBA-like thioredoxin domain 47 183 2.9E-21 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DDU33_08310 4917ffb86258c86f1477efd04d9dcf1d 365 SUPERFAMILY SSF53955 43 359 8.1E-84 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DDU33_08310 4917ffb86258c86f1477efd04d9dcf1d 365 Gene3D G3DSA:1.10.8.350 82 233 2.5E-74 T 14-10-2018 DDU33_08310 4917ffb86258c86f1477efd04d9dcf1d 365 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 46 359 9.0E-104 T 14-10-2018 IPR011970 Lytic murein transglycosylase DDU33_08310 4917ffb86258c86f1477efd04d9dcf1d 365 Pfam PF13406 Transglycosylase SLT domain 47 357 1.2E-87 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 DDU33_08310 4917ffb86258c86f1477efd04d9dcf1d 365 Gene3D G3DSA:1.10.530.10 100 356 2.5E-74 T 14-10-2018 DDU33_07495 a7b073d8daf656624984c130f66077a1 715 Gene3D G3DSA:2.40.170.20 181 715 5.2E-72 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DDU33_07495 a7b073d8daf656624984c130f66077a1 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 157 1.5E-5 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DDU33_07495 a7b073d8daf656624984c130f66077a1 715 Pfam PF00593 TonB dependent receptor 253 714 2.1E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DDU33_07495 a7b073d8daf656624984c130f66077a1 715 SUPERFAMILY SSF56935 18 715 7.33E-91 T 14-10-2018 DDU33_07495 a7b073d8daf656624984c130f66077a1 715 Gene3D G3DSA:2.170.130.10 58 177 1.2E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 Pfam PF07732 Multicopper oxidase 65 173 4.5E-12 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 SUPERFAMILY SSF49503 172 332 2.51E-53 T 14-10-2018 IPR008972 Cupredoxin DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 Gene3D G3DSA:2.60.40.420 21 174 1.0E-37 T 14-10-2018 IPR008972 Cupredoxin DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 Gene3D G3DSA:2.60.40.420 175 345 1.7E-55 T 14-10-2018 IPR008972 Cupredoxin DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 PRINTS PR00695 Copper containing nitrite reductase signature 77 93 7.2E-25 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 PRINTS PR00695 Copper containing nitrite reductase signature 137 152 7.2E-25 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 PRINTS PR00695 Copper containing nitrite reductase signature 95 112 7.2E-25 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 PRINTS PR00695 Copper containing nitrite reductase signature 154 170 7.2E-25 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 PRINTS PR00695 Copper containing nitrite reductase signature 112 131 7.2E-25 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 PRINTS PR00695 Copper containing nitrite reductase signature 51 69 7.2E-25 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 37 331 7.1E-101 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 Pfam PF00394 Multicopper oxidase 181 303 1.8E-6 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DDU33_04470 a12ba7efc17d9f2007fec8b7458ee288 351 SUPERFAMILY SSF49503 38 181 2.17E-37 T 14-10-2018 IPR008972 Cupredoxin DDU33_09235 fc7db806da2e5b8e5dbb2b456ab9ceed 61 Gene3D G3DSA:3.30.50.10 1 60 6.4E-24 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 DDU33_09235 fc7db806da2e5b8e5dbb2b456ab9ceed 61 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 59 18.968 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DDU33_09235 fc7db806da2e5b8e5dbb2b456ab9ceed 61 Pfam PF03884 DNA gyrase inhibitor YacG 6 50 2.5E-24 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DDU33_09235 fc7db806da2e5b8e5dbb2b456ab9ceed 61 SUPERFAMILY SSF57716 4 56 5.84E-21 T 14-10-2018 DDU33_02725 bc2dde763bc787baa751e011c6f7b981 239 Pfam PF10670 Domain of unknown function (DUF4198) 23 205 2.7E-10 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 DDU33_08455 e5f91b96d99746f546e0c8cec67d9b07 234 Gene3D G3DSA:3.30.420.40 96 191 9.9E-72 T 14-10-2018 DDU33_08455 e5f91b96d99746f546e0c8cec67d9b07 234 Gene3D G3DSA:3.30.420.40 5 225 9.9E-72 T 14-10-2018 DDU33_08455 e5f91b96d99746f546e0c8cec67d9b07 234 SUPERFAMILY SSF53067 111 220 8.67E-20 T 14-10-2018 DDU33_08455 e5f91b96d99746f546e0c8cec67d9b07 234 Pfam PF00814 Glycoprotease family 30 193 1.9E-32 T 14-10-2018 IPR000905 Gcp-like domain DDU33_08455 e5f91b96d99746f546e0c8cec67d9b07 234 SUPERFAMILY SSF53067 5 105 1.6E-28 T 14-10-2018 DDU33_08455 e5f91b96d99746f546e0c8cec67d9b07 234 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 222 8.0E-63 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DDU33_00585 3487cfd16305339e25c1730cbbb31968 205 Gene3D G3DSA:3.90.870.10 1 205 1.3E-68 T 14-10-2018 DDU33_00585 3487cfd16305339e25c1730cbbb31968 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 4.0E-74 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DDU33_00585 3487cfd16305339e25c1730cbbb31968 205 Pfam PF01300 Telomere recombination 22 197 5.7E-46 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DDU33_00585 3487cfd16305339e25c1730cbbb31968 205 SUPERFAMILY SSF55821 1 202 9.46E-64 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DDU33_00665 da79c10d14bc736639595619d4f09b04 148 Pfam PF02987 Late embryogenesis abundant protein 83 124 5.0E-7 T 14-10-2018 IPR004238 Late embryogenesis abundant protein, LEA_4 subgroup DDU33_00665 da79c10d14bc736639595619d4f09b04 148 Gene3D G3DSA:1.20.120.20 20 148 9.1E-13 T 14-10-2018 DDU33_00665 da79c10d14bc736639595619d4f09b04 148 SUPERFAMILY SSF58113 25 144 1.57E-8 T 14-10-2018 DDU33_07370 0aedaebb539057447aa518027b610e3b 232 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 10 224 38.286 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 DDU33_07370 0aedaebb539057447aa518027b610e3b 232 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 34 225 2.6E-91 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 DDU33_07370 0aedaebb539057447aa518027b610e3b 232 SUPERFAMILY SSF51366 11 223 2.35E-55 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_07370 0aedaebb539057447aa518027b610e3b 232 Gene3D G3DSA:3.20.20.70 2 228 4.4E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_06185 5cbdf388583a64a4a97ee08e343d6f63 157 PIRSF PIRSF006162 1 157 5.3E-46 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DDU33_06185 5cbdf388583a64a4a97ee08e343d6f63 157 SUPERFAMILY SSF101307 5 154 3.79E-41 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DDU33_06185 5cbdf388583a64a4a97ee08e343d6f63 157 Pfam PF04608 Phosphatidylglycerophosphatase A 11 153 1.2E-45 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DDU33_05450 8f30b9081d8f01feff5292314ef2c4f5 334 Pfam PF13413 Helix-turn-helix domain 18 78 5.9E-17 T 14-10-2018 DDU33_05450 8f30b9081d8f01feff5292314ef2c4f5 334 Gene3D G3DSA:1.10.260.40 5 113 2.3E-20 T 14-10-2018 DDU33_05450 8f30b9081d8f01feff5292314ef2c4f5 334 SUPERFAMILY SSF47413 13 52 3.85E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_05450 8f30b9081d8f01feff5292314ef2c4f5 334 Pfam PF13464 Domain of unknown function (DUF4115) 264 330 2.0E-9 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 DDU33_05055 c839e5a767b0490e7d868ff5c0b8843f 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 216 1.1E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_05055 c839e5a767b0490e7d868ff5c0b8843f 223 SUPERFAMILY SSF161098 7 201 7.85E-33 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_05055 c839e5a767b0490e7d868ff5c0b8843f 223 Gene3D G3DSA:1.10.3720.10 1 218 3.2E-44 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_05055 c839e5a767b0490e7d868ff5c0b8843f 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 110 6.6E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DDU33_02555 b3e90d8ca611f45e1ed34fec69cd28d9 73 Hamap MF_00715 Protein SlyX [slyX]. 6 73 17.319 T 14-10-2018 IPR007236 SlyX DDU33_02555 b3e90d8ca611f45e1ed34fec69cd28d9 73 Pfam PF04102 SlyX 9 73 1.3E-25 T 14-10-2018 IPR007236 SlyX DDU33_03215 b40008836c4ae22cac2c74c4e501b18a 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 4.7E-29 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03215 b40008836c4ae22cac2c74c4e501b18a 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 3.0E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03215 b40008836c4ae22cac2c74c4e501b18a 139 SUPERFAMILY SSF46604 88 131 7.85E-8 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03215 b40008836c4ae22cac2c74c4e501b18a 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 129 7.5E-38 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03215 b40008836c4ae22cac2c74c4e501b18a 139 SUPERFAMILY SSF51344 4 86 1.7E-25 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03215 b40008836c4ae22cac2c74c4e501b18a 139 Gene3D G3DSA:2.60.15.10 1 133 1.2E-35 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_03215 b40008836c4ae22cac2c74c4e501b18a 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 127 19.612 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DDU33_02085 538f16a94c58b393007e08b78b20414b 127 Gene3D G3DSA:3.90.1030.10 1 117 5.9E-49 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02085 538f16a94c58b393007e08b78b20414b 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.7E-51 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02085 538f16a94c58b393007e08b78b20414b 127 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-35 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02085 538f16a94c58b393007e08b78b20414b 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02085 538f16a94c58b393007e08b78b20414b 127 SUPERFAMILY SSF64263 1 119 3.92E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02085 538f16a94c58b393007e08b78b20414b 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.763 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_04925 6c2d23a38330bb60ca6cb6389f34b70f 103 PIRSF PIRSF004916 1 103 3.3E-50 T 14-10-2018 IPR007376 dsDNA mimic, putative DDU33_04925 6c2d23a38330bb60ca6cb6389f34b70f 103 SUPERFAMILY SSF102816 2 103 3.4E-51 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily DDU33_04925 6c2d23a38330bb60ca6cb6389f34b70f 103 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 103 30.499 T 14-10-2018 IPR007376 dsDNA mimic, putative DDU33_04925 6c2d23a38330bb60ca6cb6389f34b70f 103 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 3 103 5.0E-48 T 14-10-2018 IPR007376 dsDNA mimic, putative DDU33_04925 6c2d23a38330bb60ca6cb6389f34b70f 103 Pfam PF04269 Protein of unknown function, DUF440 4 103 5.0E-46 T 14-10-2018 IPR007376 dsDNA mimic, putative DDU33_04925 6c2d23a38330bb60ca6cb6389f34b70f 103 Gene3D G3DSA:3.10.450.140 4 103 5.0E-41 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily DDU33_07170 ee50cd58b71757c5627c55279c0f4a44 232 SUPERFAMILY SSF100950 43 230 6.7E-40 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_07170 ee50cd58b71757c5627c55279c0f4a44 232 Gene3D G3DSA:3.40.50.10420 42 229 1.7E-32 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DDU33_07170 ee50cd58b71757c5627c55279c0f4a44 232 Pfam PF02589 LUD domain 51 228 9.6E-31 T 14-10-2018 IPR003741 LUD domain DDU33_07205 edd25ef58b6821a32c48309cfbf0fb59 182 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 154 1.7E-42 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DDU33_07205 edd25ef58b6821a32c48309cfbf0fb59 182 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 179 2.6E-85 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DDU33_07205 edd25ef58b6821a32c48309cfbf0fb59 182 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 154 2.3E-39 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DDU33_07205 edd25ef58b6821a32c48309cfbf0fb59 182 Gene3D G3DSA:3.40.50.1000 1 182 1.2E-65 T 14-10-2018 IPR023214 HAD superfamily DDU33_07205 edd25ef58b6821a32c48309cfbf0fb59 182 PIRSF PIRSF004682 1 182 7.7E-72 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DDU33_07205 edd25ef58b6821a32c48309cfbf0fb59 182 Pfam PF13242 HAD-hyrolase-like 107 176 9.6E-16 T 14-10-2018 DDU33_07205 edd25ef58b6821a32c48309cfbf0fb59 182 SUPERFAMILY SSF56784 2 181 3.87E-51 T 14-10-2018 IPR036412 HAD-like superfamily DDU33_02705 5aed05cf4684ef179084b2093b6d5949 209 SUPERFAMILY SSF52540 1 207 1.25E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_02705 5aed05cf4684ef179084b2093b6d5949 209 Pfam PF00005 ABC transporter 19 165 4.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_02705 5aed05cf4684ef179084b2093b6d5949 209 Gene3D G3DSA:3.40.50.300 1 208 4.0E-51 T 14-10-2018 DDU33_02705 5aed05cf4684ef179084b2093b6d5949 209 SMART SM00382 27 205 5.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 ProSitePatterns PS00433 Phosphofructokinase signature. 248 266 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 324 46.717 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 SUPERFAMILY SSF53784 3 314 2.62E-115 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 Gene3D G3DSA:3.40.50.450 7 291 3.0E-113 T 14-10-2018 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 Pfam PF00365 Phosphofructokinase 7 280 5.3E-108 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 181 198 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 217 229 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 266 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 163 179 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 125 142 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 161 3.0E-82 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 Gene3D G3DSA:3.40.50.460 147 256 3.0E-113 T 14-10-2018 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 PIRSF PIRSF000532 4 324 2.3E-127 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DDU33_06100 dd8e50b3936742374b3d10ca6ee6c5ff 324 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 305 8.5E-128 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DDU33_09115 01e75473dfe0c5f92040217a25a7c59c 469 Pfam PF04317 YcjX-like family, DUF463 21 468 1.0E-168 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein DDU33_09115 01e75473dfe0c5f92040217a25a7c59c 469 PIRSF PIRSF019381 1 469 1.0E-182 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein DDU33_07180 be712697871840f3761d0d917f98ab86 245 Pfam PF02754 Cysteine-rich domain 135 218 2.2E-13 T 14-10-2018 IPR004017 Cysteine-rich domain DDU33_07180 be712697871840f3761d0d917f98ab86 245 Pfam PF02754 Cysteine-rich domain 3 84 8.2E-13 T 14-10-2018 IPR004017 Cysteine-rich domain DDU33_09030 d554c8543afa0f21b484f3508f558544 190 Pfam PF07273 Protein of unknown function (DUF1439) 27 181 1.1E-48 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 DDU33_09030 d554c8543afa0f21b484f3508f558544 190 Gene3D G3DSA:3.15.10.40 17 189 5.4E-49 T 14-10-2018 DDU33_05285 ab108eca34860a1572b29a250ff2aad2 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 16 213 2.9E-56 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DDU33_05285 ab108eca34860a1572b29a250ff2aad2 221 Pfam PF02592 Putative vitamin uptake transporter 52 208 9.2E-38 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DDU33_05285 ab108eca34860a1572b29a250ff2aad2 221 Hamap MF_02088 Probable queuosine precursor transporter. 10 218 15.572 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DDU33_10470 3007c197440fd053c3518ee98de9fefb 189 PIRSF PIRSF006806 7 189 3.1E-38 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DDU33_10470 3007c197440fd053c3518ee98de9fefb 189 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 188 4.0E-40 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DDU33_10470 3007c197440fd053c3518ee98de9fefb 189 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 187 7.2E-50 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DDU33_10470 3007c197440fd053c3518ee98de9fefb 189 SUPERFAMILY SSF100950 10 187 1.0E-49 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_10470 3007c197440fd053c3518ee98de9fefb 189 Gene3D G3DSA:3.40.50.10420 3 189 6.2E-50 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DDU33_01740 5f5c194141136a13adfd2977c13f3296 125 Pfam PF04304 Protein of unknown function (DUF454) 3 117 6.4E-38 T 14-10-2018 IPR007401 Protein of unknown function DUF454 DDU33_01740 5f5c194141136a13adfd2977c13f3296 125 PIRSF PIRSF016789 2 123 1.1E-34 T 14-10-2018 IPR007401 Protein of unknown function DUF454 DDU33_08625 4e95270ffcdbf72fb48fa489dc835799 202 Gene3D G3DSA:2.30.30.40 28 82 6.5E-7 T 14-10-2018 DDU33_08625 4e95270ffcdbf72fb48fa489dc835799 202 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 26 201 6.7E-47 T 14-10-2018 IPR016476 SH3 domain protein DDU33_08625 4e95270ffcdbf72fb48fa489dc835799 202 PIRSF PIRSF006158 1 202 7.4E-58 T 14-10-2018 IPR016476 SH3 domain protein DDU33_08625 4e95270ffcdbf72fb48fa489dc835799 202 Pfam PF08239 Bacterial SH3 domain 33 82 1.3E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DDU33_08625 4e95270ffcdbf72fb48fa489dc835799 202 SUPERFAMILY SSF58100 91 192 4.97E-5 T 14-10-2018 DDU33_08625 4e95270ffcdbf72fb48fa489dc835799 202 SMART SM00287 22 86 1.5E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DDU33_04405 433bdb9bc682a756b425a97c8ed44046 178 Pfam PF02325 YGGT family 99 166 7.9E-16 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 DDU33_04405 433bdb9bc682a756b425a97c8ed44046 178 Pfam PF02325 YGGT family 10 77 1.6E-11 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 DDU33_10105 1c30634542e2a92c0cc0085dcd8f7f26 248 SUPERFAMILY SSF69572 2 246 3.66E-87 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DDU33_10105 1c30634542e2a92c0cc0085dcd8f7f26 248 Gene3D G3DSA:3.40.50.720 3 248 3.0E-90 T 14-10-2018 DDU33_10105 1c30634542e2a92c0cc0085dcd8f7f26 248 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 7 246 4.4E-127 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 DDU33_10105 1c30634542e2a92c0cc0085dcd8f7f26 248 Pfam PF00899 ThiF family 11 243 4.6E-66 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DDU33_09705 7abb9290e33d1539562d38566a68ff1a 126 PIRSF PIRSF006287 1 125 2.2E-46 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 DDU33_09705 7abb9290e33d1539562d38566a68ff1a 126 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 122 7.0E-50 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 DDU33_09705 7abb9290e33d1539562d38566a68ff1a 126 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 122 8.3E-41 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 DDU33_06325 1a1827fddbaf11239d42f47b4ccae5a9 392 SUPERFAMILY SSF56059 91 322 7.07E-42 T 14-10-2018 DDU33_06325 1a1827fddbaf11239d42f47b4ccae5a9 392 Pfam PF13535 ATP-grasp domain 151 291 4.3E-12 T 14-10-2018 DDU33_06325 1a1827fddbaf11239d42f47b4ccae5a9 392 Gene3D G3DSA:3.30.470.20 111 389 7.7E-30 T 14-10-2018 DDU33_00385 f1928cd568fdbe1f30c30b306ec860aa 198 SUPERFAMILY SSF46689 20 81 1.13E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_00385 f1928cd568fdbe1f30c30b306ec860aa 198 Gene3D G3DSA:1.10.357.10 18 191 2.0E-29 T 14-10-2018 DDU33_00385 f1928cd568fdbe1f30c30b306ec860aa 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 74 3.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_07065 4ca1c7861a1877f9d53ccd38972007de 117 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 111 31.826 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE DDU33_07065 4ca1c7861a1877f9d53ccd38972007de 117 Pfam PF04355 SmpA / OmlA family 34 103 2.4E-27 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DDU33_07065 4ca1c7861a1877f9d53ccd38972007de 117 Gene3D G3DSA:3.30.1450.10 33 116 5.3E-29 T 14-10-2018 IPR037873 BamE-like DDU33_07925 229c5f9801a9a0aba9c9a4e2e9cb33f7 390 Pfam PF04865 Baseplate J-like protein 78 325 1.4E-36 T 14-10-2018 IPR006949 Baseplate protein J-like DDU33_00700 0b9adf36d393c397cab707bae610b126 59 Pfam PF13490 Putative zinc-finger 3 37 5.4E-6 T 14-10-2018 IPR027383 Putative zinc-finger DDU33_03925 4bfbb870dc87f13a211b7cea6105daa4 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 269 3.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_03925 4bfbb870dc87f13a211b7cea6105daa4 274 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 15 268 3.3E-111 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 DDU33_03925 4bfbb870dc87f13a211b7cea6105daa4 274 SUPERFAMILY SSF161098 13 265 1.4E-51 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_03925 4bfbb870dc87f13a211b7cea6105daa4 274 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 264 6.4E-91 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DDU33_03925 4bfbb870dc87f13a211b7cea6105daa4 274 Gene3D G3DSA:1.10.3720.10 14 271 8.3E-61 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_06405 7d996e25d0abe67b9ac3ff17a7f8deda 227 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 12 225 4.8E-99 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 DDU33_06405 7d996e25d0abe67b9ac3ff17a7f8deda 227 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 8.3E-34 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 DDU33_06405 7d996e25d0abe67b9ac3ff17a7f8deda 227 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 227 130.867 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 DDU33_06405 7d996e25d0abe67b9ac3ff17a7f8deda 227 SMART SM00927 59 157 1.9E-60 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 DDU33_06405 7d996e25d0abe67b9ac3ff17a7f8deda 227 Gene3D G3DSA:3.40.600.10 1 226 6.8E-52 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 DDU33_06405 7d996e25d0abe67b9ac3ff17a7f8deda 227 SUPERFAMILY SSF52980 10 226 2.84E-75 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDU33_09880 be05feb3d4c75415264fb0aec51cfb61 227 Gene3D G3DSA:1.20.950.20 7 223 2.7E-68 T 14-10-2018 DDU33_09880 be05feb3d4c75415264fb0aec51cfb61 227 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 12 212 4.2E-82 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 DDU33_09880 be05feb3d4c75415264fb0aec51cfb61 227 Pfam PF01292 Prokaryotic cytochrome b561 15 192 3.5E-20 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DDU33_09880 be05feb3d4c75415264fb0aec51cfb61 227 SUPERFAMILY SSF81342 10 216 2.28E-50 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DDU33_01540 38902462c305d16badc5bf212d608751 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDU33_01540 38902462c305d16badc5bf212d608751 175 Gene3D G3DSA:3.90.80.10 1 175 1.8E-69 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDU33_01540 38902462c305d16badc5bf212d608751 175 SUPERFAMILY SSF50324 4 175 1.7E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDU33_01540 38902462c305d16badc5bf212d608751 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.4E-53 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDU33_01540 38902462c305d16badc5bf212d608751 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.89 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 SUPERFAMILY SSF53613 1 305 3.9E-81 T 14-10-2018 IPR029056 Ribokinase-like DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 Gene3D G3DSA:3.40.1190.20 1 306 4.9E-91 T 14-10-2018 IPR029056 Ribokinase-like DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 PRINTS PR00990 Ribokinase signature 22 41 2.4E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 PRINTS PR00990 Ribokinase signature 214 225 2.4E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 PRINTS PR00990 Ribokinase signature 174 189 2.4E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DDU33_04475 d8ec35334ebbb23cb336696180dde264 307 Pfam PF00294 pfkB family carbohydrate kinase 1 297 4.3E-70 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DDU33_09530 cc766fc0c73943bdf7ef3b8f984bf712 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 286 3.6E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DDU33_09130 16ec98cbaa616e27d7a8b8f80aefa58c 482 Gene3D G3DSA:3.40.50.1220 304 482 4.9E-89 T 14-10-2018 DDU33_09130 16ec98cbaa616e27d7a8b8f80aefa58c 482 PIRSF PIRSF000204 1 482 1.8E-231 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 DDU33_09130 16ec98cbaa616e27d7a8b8f80aefa58c 482 SUPERFAMILY SSF52467 307 481 7.85E-80 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DDU33_09130 16ec98cbaa616e27d7a8b8f80aefa58c 482 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 478 8.9E-198 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DDU33_06655 d0b8b382dc633a10e8e70ee4c686e08a 451 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 31 45 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_06655 d0b8b382dc633a10e8e70ee4c686e08a 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 5.1E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_06655 d0b8b382dc633a10e8e70ee4c686e08a 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 5.1E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_06655 d0b8b382dc633a10e8e70ee4c686e08a 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 262 282 5.1E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_06655 d0b8b382dc633a10e8e70ee4c686e08a 451 Pfam PF00209 Sodium:neurotransmitter symporter family 160 450 1.7E-33 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_06655 d0b8b382dc633a10e8e70ee4c686e08a 451 Pfam PF00209 Sodium:neurotransmitter symporter family 7 129 7.7E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DDU33_06655 d0b8b382dc633a10e8e70ee4c686e08a 451 SUPERFAMILY SSF161070 7 451 5.49E-125 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DDU33_06345 d979f367a12b3212321ec7c64b6f39d6 326 SUPERFAMILY SSF81345 9 317 6.54E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_06345 d979f367a12b3212321ec7c64b6f39d6 326 Gene3D G3DSA:1.10.3470.10 2 324 1.5E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_06345 d979f367a12b3212321ec7c64b6f39d6 326 Pfam PF01032 FecCD transport family 11 317 4.2E-72 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DDU33_07110 58a8b4db6be605a86753a6c0063be466 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.7E-64 T 14-10-2018 DDU33_07110 58a8b4db6be605a86753a6c0063be466 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.503 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DDU33_07110 58a8b4db6be605a86753a6c0063be466 208 Gene3D G3DSA:3.40.50.2020 1 208 1.0E-72 T 14-10-2018 DDU33_07110 58a8b4db6be605a86753a6c0063be466 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.5E-91 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DDU33_07110 58a8b4db6be605a86753a6c0063be466 208 SUPERFAMILY SSF53271 4 206 1.04E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_02630 c39674d8931c870d62fc2e50dbea2400 492 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 83 475 4.7E-111 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DDU33_02630 c39674d8931c870d62fc2e50dbea2400 492 PIRSF PIRSF006247 1 492 1.4E-163 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DDU33_02630 c39674d8931c870d62fc2e50dbea2400 492 Pfam PF02386 Cation transport protein 38 484 9.6E-88 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 10 293 4.4E-149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 Gene3D G3DSA:1.20.58.180 216 298 7.2E-33 T 14-10-2018 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 Gene3D G3DSA:3.30.930.10 1 215 4.1E-111 T 14-10-2018 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 SUPERFAMILY SSF55681 9 293 6.63E-133 T 14-10-2018 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 302 5.1E-178 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 62 77 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 114 138 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 163 178 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 83 103 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 140 160 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 4.0E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_01660 41d03c5c07f244f9265acb3ed7fc7a22 302 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 8 294 62.233 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DDU33_04700 5bdbb6261bbc169150be4660c85e1fab 435 ProSitePatterns PS01219 Ammonium transporters signature. 194 219 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DDU33_04700 5bdbb6261bbc169150be4660c85e1fab 435 Pfam PF00909 Ammonium Transporter Family 36 433 4.6E-117 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DDU33_04700 5bdbb6261bbc169150be4660c85e1fab 435 Gene3D G3DSA:1.10.3430.10 15 435 4.1E-137 T 14-10-2018 IPR029020 Ammonium/urea transporter DDU33_04700 5bdbb6261bbc169150be4660c85e1fab 435 TIGRFAM TIGR00836 amt: ammonium transporter 34 432 1.9E-130 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DDU33_04700 5bdbb6261bbc169150be4660c85e1fab 435 SUPERFAMILY SSF111352 30 411 2.35E-126 T 14-10-2018 DDU33_10120 695c79fd78f4fda7944594765bc55c61 168 Pfam PF02674 Colicin V production protein 2 147 4.9E-37 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DDU33_07505 136c65a77b93014ca1dd59cbfa3b598f 573 Gene3D G3DSA:3.40.720.10 252 406 3.4E-5 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DDU33_07505 136c65a77b93014ca1dd59cbfa3b598f 573 PIRSF PIRSF004950 14 413 2.3E-143 T 14-10-2018 IPR012159 Inner membrane protein YejM DDU33_07505 136c65a77b93014ca1dd59cbfa3b598f 573 PIRSF PIRSF004950 405 573 4.8E-41 T 14-10-2018 IPR012159 Inner membrane protein YejM DDU33_07505 136c65a77b93014ca1dd59cbfa3b598f 573 SUPERFAMILY SSF53649 267 523 1.03E-25 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DDU33_07505 136c65a77b93014ca1dd59cbfa3b598f 573 Pfam PF11893 Domain of unknown function (DUF3413) 14 259 9.4E-102 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal DDU33_07505 136c65a77b93014ca1dd59cbfa3b598f 573 Gene3D G3DSA:3.40.720.10 407 520 7.9E-12 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DDU33_07505 136c65a77b93014ca1dd59cbfa3b598f 573 Pfam PF00884 Sulfatase 386 489 1.0E-8 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DDU33_07760 51676cf131ddb08438d9a8913fd0b2e0 87 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 20 61 8.0E-11 T 14-10-2018 DDU33_00485 2769d1ccd188cc42be87d25ca0bf0cbd 347 Gene3D G3DSA:3.40.50.2000 5 152 4.4E-27 T 14-10-2018 DDU33_00485 2769d1ccd188cc42be87d25ca0bf0cbd 347 Gene3D G3DSA:3.40.50.2000 158 344 9.4E-42 T 14-10-2018 DDU33_00485 2769d1ccd188cc42be87d25ca0bf0cbd 347 SUPERFAMILY SSF53756 6 343 1.49E-84 T 14-10-2018 DDU33_00485 2769d1ccd188cc42be87d25ca0bf0cbd 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 299 1.8E-59 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DDU33_04140 ec648f67dc67330fb21e0deeaf70837e 409 Pfam PF03222 Tryptophan/tyrosine permease family 17 377 2.9E-14 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DDU33_04140 ec648f67dc67330fb21e0deeaf70837e 409 TIGRFAM TIGR00814 stp: serine transporter 8 399 4.9E-160 T 14-10-2018 IPR004694 Hydroxy amino acid transporter GO:0006865|GO:0015171|GO:0016021 DDU33_07120 ea7d5e6d7524b8393cb9bcd4b36fc089 149 PIRSF PIRSF004923 1 148 1.1E-30 T 14-10-2018 IPR026268 Protein RseC DDU33_07120 ea7d5e6d7524b8393cb9bcd4b36fc089 149 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 136 2.3E-26 T 14-10-2018 DDU33_01430 e940e1e53f373ebbf71c0c493a57c234 206 Pfam PF00293 NUDIX domain 54 177 6.3E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DDU33_01430 e940e1e53f373ebbf71c0c493a57c234 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 200 5.9E-64 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 DDU33_01430 e940e1e53f373ebbf71c0c493a57c234 206 Gene3D G3DSA:3.90.79.10 2 206 2.4E-55 T 14-10-2018 DDU33_01430 e940e1e53f373ebbf71c0c493a57c234 206 SUPERFAMILY SSF55811 8 205 7.31E-38 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DDU33_05195 315b45bb23d862539b99ff30ed88652b 172 Pfam PF13505 Outer membrane protein beta-barrel domain 6 172 1.0E-22 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DDU33_05195 315b45bb23d862539b99ff30ed88652b 172 SUPERFAMILY SSF56925 28 172 4.45E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_06715 5813f1dc56bc9efb5884857f81ecd230 194 Pfam PF04011 LemA family 9 193 1.7E-65 T 14-10-2018 IPR007156 LemA DDU33_06715 5813f1dc56bc9efb5884857f81ecd230 194 Gene3D G3DSA:1.20.1440.20 16 193 8.7E-61 T 14-10-2018 IPR023353 LemA-like domain superfamily DDU33_06715 5813f1dc56bc9efb5884857f81ecd230 194 SUPERFAMILY SSF140478 26 182 2.75E-49 T 14-10-2018 IPR023353 LemA-like domain superfamily DDU33_02100 8564c2410a2ee843997d9cf502eb620a 129 Gene3D G3DSA:3.30.420.80 1 129 1.7E-58 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DDU33_02100 8564c2410a2ee843997d9cf502eb620a 129 Pfam PF00411 Ribosomal protein S11 19 128 5.0E-54 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DDU33_02100 8564c2410a2ee843997d9cf502eb620a 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.879 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DDU33_02100 8564c2410a2ee843997d9cf502eb620a 129 SUPERFAMILY SSF53137 15 129 1.44E-48 T 14-10-2018 DDU33_02100 8564c2410a2ee843997d9cf502eb620a 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site DDU33_02100 8564c2410a2ee843997d9cf502eb620a 129 PIRSF PIRSF002131 1 129 2.0E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DDU33_02100 8564c2410a2ee843997d9cf502eb620a 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.3E-56 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DDU33_09340 61cf910b2c4a8f961f561b2dd6060354 114 Gene3D G3DSA:1.10.260.40 3 111 2.8E-19 T 14-10-2018 DDU33_09340 61cf910b2c4a8f961f561b2dd6060354 114 SMART SM00530 15 70 3.5E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_09340 61cf910b2c4a8f961f561b2dd6060354 114 Pfam PF01381 Helix-turn-helix 16 70 1.6E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_09340 61cf910b2c4a8f961f561b2dd6060354 114 SUPERFAMILY SSF47413 9 75 2.09E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_09200 55f424ce6f1198cd8c29bec3c80c70c9 468 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 173 468 135.921 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDU33_09200 55f424ce6f1198cd8c29bec3c80c70c9 468 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 185 463 3.1E-101 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDU33_09200 55f424ce6f1198cd8c29bec3c80c70c9 468 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 188 462 9.8E-75 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DDU33_09200 55f424ce6f1198cd8c29bec3c80c70c9 468 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 16 178 5.4E-51 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 DDU33_09200 55f424ce6f1198cd8c29bec3c80c70c9 468 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 16 179 5.2E-55 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 DDU33_06410 9db6b2458ebdd9f052c30bc15e985ee9 249 Pfam PF03741 Integral membrane protein TerC family 15 205 7.2E-49 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DDU33_05040 30449110291823a3818647c50dfe2490 165 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 26 163 4.4E-32 T 14-10-2018 IPR005247 YbhB/YbcL DDU33_05040 30449110291823a3818647c50dfe2490 165 SUPERFAMILY SSF49777 1 163 3.01E-31 T 14-10-2018 IPR036610 PEBP-like superfamily DDU33_05040 30449110291823a3818647c50dfe2490 165 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 163 1.5E-28 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein DDU33_05040 30449110291823a3818647c50dfe2490 165 Gene3D G3DSA:3.90.280.10 1 165 1.9E-42 T 14-10-2018 IPR036610 PEBP-like superfamily DDU33_04390 2e0c4b2758a826a7fa3e9e12eb89fe43 107 Gene3D G3DSA:2.20.25.10 1 41 1.7E-17 T 14-10-2018 DDU33_04390 2e0c4b2758a826a7fa3e9e12eb89fe43 107 Pfam PF08274 PhnA Zinc-Ribbon 2 31 1.4E-13 T 14-10-2018 IPR013987 PhnA protein, N-terminal DDU33_04390 2e0c4b2758a826a7fa3e9e12eb89fe43 107 Gene3D G3DSA:2.30.30.40 42 107 7.0E-27 T 14-10-2018 DDU33_04390 2e0c4b2758a826a7fa3e9e12eb89fe43 107 SUPERFAMILY SSF57783 1 35 4.19E-13 T 14-10-2018 DDU33_04390 2e0c4b2758a826a7fa3e9e12eb89fe43 107 Pfam PF03831 PhnA domain 45 107 4.3E-25 T 14-10-2018 IPR013988 PhnA protein, C-terminal DDU33_04390 2e0c4b2758a826a7fa3e9e12eb89fe43 107 SUPERFAMILY SSF82057 39 107 5.49E-23 T 14-10-2018 DDU33_04390 2e0c4b2758a826a7fa3e9e12eb89fe43 107 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 107 9.1E-53 T 14-10-2018 IPR004624 PhnA protein DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 Pfam PF01578 Cytochrome C assembly protein 30 184 4.0E-33 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 227 1.7E-76 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 4.4E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 4.4E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 4.4E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 4.4E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 4.4E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04675 1ee623c257ab8d13392c231468f981a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 4.4E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_07745 34144e689007b653935b6a44200ef473 273 SUPERFAMILY SSF89550 1 271 3.66E-54 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DDU33_07745 34144e689007b653935b6a44200ef473 273 SMART SM00481 3 68 2.8E-23 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DDU33_07745 34144e689007b653935b6a44200ef473 273 Gene3D G3DSA:1.10.150.650 96 166 6.4E-83 T 14-10-2018 DDU33_07745 34144e689007b653935b6a44200ef473 273 Gene3D G3DSA:3.20.20.140 4 247 6.4E-83 T 14-10-2018 DDU33_07745 34144e689007b653935b6a44200ef473 273 Pfam PF02811 PHP domain 4 129 1.8E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 DDU33_06105 4b0776856b0c04286bfbfbfcb0c317fc 237 Pfam PF14256 YwiC-like protein 8 134 1.8E-32 T 14-10-2018 IPR025576 YwiC-like protein DDU33_06120 9915b7c03364e4612bd5ec85e5787894 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 1.9E-75 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DDU33_06120 9915b7c03364e4612bd5ec85e5787894 367 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.1E-117 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 DDU33_09335 4e5cc88bd71e7927fa21da6fd75efd4a 295 Gene3D G3DSA:1.10.10.10 1 50 2.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_09335 4e5cc88bd71e7927fa21da6fd75efd4a 295 Pfam PF13280 WYL domain 123 290 6.3E-23 T 14-10-2018 IPR026881 WYL domain DDU33_09335 4e5cc88bd71e7927fa21da6fd75efd4a 295 Pfam PF08279 HTH domain 10 45 5.3E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DDU33_10205 d8284ee9f37b8fee6a5b3087bf11ae79 195 Pfam PF00877 NlpC/P60 family 92 193 3.4E-28 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DDU33_10205 d8284ee9f37b8fee6a5b3087bf11ae79 195 Gene3D G3DSA:3.90.1720.10 76 195 5.5E-39 T 14-10-2018 DDU33_10205 d8284ee9f37b8fee6a5b3087bf11ae79 195 SUPERFAMILY SSF54001 74 194 2.31E-36 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DDU33_00175 1245abd6eaaa8a3b1363bad4aff8ad18 226 SMART SM00382 33 221 1.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DDU33_00175 1245abd6eaaa8a3b1363bad4aff8ad18 226 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.3E-109 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 DDU33_00175 1245abd6eaaa8a3b1363bad4aff8ad18 226 Gene3D G3DSA:3.40.50.300 1 225 1.8E-69 T 14-10-2018 DDU33_00175 1245abd6eaaa8a3b1363bad4aff8ad18 226 Pfam PF00005 ABC transporter 24 172 8.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_00175 1245abd6eaaa8a3b1363bad4aff8ad18 226 SUPERFAMILY SSF52540 4 224 1.86E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00175 1245abd6eaaa8a3b1363bad4aff8ad18 226 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DDU33_01350 7cf67136a157a5173c8895b217eb9f41 119 Pfam PF04138 GtrA-like protein 7 118 5.1E-16 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DDU33_10415 3d541394179d8d9de57ecef0a850f14d 104 SUPERFAMILY SSF47413 47 101 8.19E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_10415 3d541394179d8d9de57ecef0a850f14d 104 SMART SM00530 48 103 4.0E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_10415 3d541394179d8d9de57ecef0a850f14d 104 Pfam PF01381 Helix-turn-helix 49 93 1.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DDU33_10415 3d541394179d8d9de57ecef0a850f14d 104 Gene3D G3DSA:1.10.260.40 2 100 5.2E-17 T 14-10-2018 DDU33_02655 69ee0b7784336650c93945322b259b4e 276 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 273 21.933 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DDU33_02655 69ee0b7784336650c93945322b259b4e 276 Pfam PF01774 UreD urease accessory protein 52 262 4.8E-42 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DDU33_04300 f468658516239b9ea3914cc87b638632 428 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 9 410 5.4E-121 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DDU33_04300 f468658516239b9ea3914cc87b638632 428 Pfam PF05525 Branched-chain amino acid transport protein 2 425 1.8E-136 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DDU33_07895 57615871bce1adc4e75eba699ce43809 79 Pfam PF16080 Bacteriophage holin family HP1 4 56 5.7E-15 T 14-10-2018 IPR032118 Bacteriophage holin HP1 family DDU33_03755 609ad826351dcd17ee641d3f33f5a999 392 SUPERFAMILY SSF48695 11 186 1.1E-47 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DDU33_03755 609ad826351dcd17ee641d3f33f5a999 392 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 14 185 5.2E-67 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal DDU33_03755 609ad826351dcd17ee641d3f33f5a999 392 PIRSF PIRSF000014 1 390 2.9E-155 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 DDU33_03755 609ad826351dcd17ee641d3f33f5a999 392 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 389 1.5E-174 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 DDU33_03755 609ad826351dcd17ee641d3f33f5a999 392 Gene3D G3DSA:1.10.3820.10 13 190 4.9E-38 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily DDU33_03385 76df63b760bdb76c9cbae7b3fb0dd55e 284 SUPERFAMILY SSF53474 42 282 1.24E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_03385 76df63b760bdb76c9cbae7b3fb0dd55e 284 Pfam PF00756 Putative esterase 47 190 3.5E-15 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DDU33_03385 76df63b760bdb76c9cbae7b3fb0dd55e 284 Gene3D G3DSA:3.40.50.1820 27 284 5.5E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_02985 c156089f62935b081a1728a255946145 334 PIRSF PIRSF015268 3 334 2.7E-140 T 14-10-2018 IPR011204 Virulence protein RhuM-like DDU33_02985 c156089f62935b081a1728a255946145 334 Pfam PF13310 Virulence protein RhuM family 69 321 4.1E-111 T 14-10-2018 IPR011204 Virulence protein RhuM-like DDU33_03520 25b9821b5ad818c01a9f40efb38c5300 291 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 134 1.8E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_03520 25b9821b5ad818c01a9f40efb38c5300 291 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 94 111 1.8E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_03520 25b9821b5ad818c01a9f40efb38c5300 291 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 44 55 1.8E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DDU33_03520 25b9821b5ad818c01a9f40efb38c5300 291 SUPERFAMILY SSF56601 9 252 3.45E-45 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DDU33_03520 25b9821b5ad818c01a9f40efb38c5300 291 Gene3D G3DSA:3.40.710.10 10 280 1.7E-51 T 14-10-2018 DDU33_03520 25b9821b5ad818c01a9f40efb38c5300 291 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 17 224 5.2E-37 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DDU33_08000 548d5f11055f712c78de7a258a217827 139 Pfam PF01047 MarR family 27 84 9.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_08000 548d5f11055f712c78de7a258a217827 139 SUPERFAMILY SSF46785 6 136 2.05E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DDU33_08000 548d5f11055f712c78de7a258a217827 139 Gene3D G3DSA:1.10.10.10 5 136 7.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_08000 548d5f11055f712c78de7a258a217827 139 SMART SM00347 20 120 1.4E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DDU33_02315 7aaffc969a7f72c7a66191861251986c 220 PIRSF PIRSF000441 35 216 8.8E-43 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DDU33_02315 7aaffc969a7f72c7a66191861251986c 220 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 166 200 2.8E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_02315 7aaffc969a7f72c7a66191861251986c 220 SUPERFAMILY SSF51161 41 209 8.18E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_02315 7aaffc969a7f72c7a66191861251986c 220 Gene3D G3DSA:2.160.10.10 113 220 1.5E-23 T 14-10-2018 DDU33_02315 7aaffc969a7f72c7a66191861251986c 220 Gene3D G3DSA:1.10.3130.10 2 110 2.9E-10 T 14-10-2018 DDU33_04950 68bc1d655546d938a0ae882e4934eca7 538 Pfam PF02646 RmuC family 214 508 2.6E-94 T 14-10-2018 IPR003798 DNA recombination RmuC DDU33_08995 505b673d8ef570ffcf6da0a03252949e 233 SUPERFAMILY SSF56112 53 195 4.86E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DDU33_08995 505b673d8ef570ffcf6da0a03252949e 233 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 32 231 3.4E-60 T 14-10-2018 DDU33_08995 505b673d8ef570ffcf6da0a03252949e 233 Gene3D G3DSA:1.10.510.10 133 233 8.1E-16 T 14-10-2018 DDU33_08995 505b673d8ef570ffcf6da0a03252949e 233 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 233 35.573 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 DDU33_06430 6f6ab9810db8bb7df457fe49019f962e 137 PIRSF PIRSF007050 1 137 4.1E-38 T 14-10-2018 IPR014449 Uncharacterised conserved protein UCP007050, HI0931 DDU33_06430 6f6ab9810db8bb7df457fe49019f962e 137 Pfam PF10008 Uncharacterized protein conserved in bacteria (DUF2251) 19 113 3.0E-43 T 14-10-2018 IPR014449 Uncharacterised conserved protein UCP007050, HI0931 DDU33_08865 62fbb33e795bf01b32cbf397766863fa 259 Pfam PF00950 ABC 3 transport family 2 257 1.1E-79 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DDU33_08865 62fbb33e795bf01b32cbf397766863fa 259 SUPERFAMILY SSF81345 2 257 6.28E-40 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_08865 62fbb33e795bf01b32cbf397766863fa 259 Gene3D G3DSA:1.10.3470.10 32 259 3.2E-8 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_02180 68b0ac7832fb675f1ffe49c510b9b4ad 440 Pfam PF01966 HD domain 57 156 4.1E-8 T 14-10-2018 IPR006674 HD domain DDU33_02180 68b0ac7832fb675f1ffe49c510b9b4ad 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 19 440 4.5E-109 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DDU33_02180 68b0ac7832fb675f1ffe49c510b9b4ad 440 SMART SM00471 53 273 1.7E-8 T 14-10-2018 IPR003607 HD/PDEase domain DDU33_02180 68b0ac7832fb675f1ffe49c510b9b4ad 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 2 440 31.153 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 DDU33_02180 68b0ac7832fb675f1ffe49c510b9b4ad 440 Pfam PF13286 Phosphohydrolase-associated domain 350 438 2.5E-23 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain DDU33_02180 68b0ac7832fb675f1ffe49c510b9b4ad 440 SUPERFAMILY SSF109604 17 438 1.26E-73 T 14-10-2018 DDU33_04590 1ff8e54ec921df342e6f3e61a7f40f78 135 Pfam PF07681 DoxX 13 91 1.9E-12 T 14-10-2018 IPR032808 DoxX family DDU33_05805 8b79e9760cb4f02a3c71455454d92d9d 130 Gene3D G3DSA:2.40.50.200 25 130 3.1E-32 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DDU33_05805 8b79e9760cb4f02a3c71455454d92d9d 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 3.5E-32 T 14-10-2018 IPR016052 Bacteriophage 933W, L0136 DDU33_05805 8b79e9760cb4f02a3c71455454d92d9d 130 SUPERFAMILY SSF101756 36 127 7.98E-30 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DDU33_05805 8b79e9760cb4f02a3c71455454d92d9d 130 Pfam PF04076 Bacterial OB fold (BOF) protein 34 129 4.2E-33 T 14-10-2018 IPR005220 Bacterial OB-fold DDU33_10635 64c39c61fd4ee179055e24fc415c15f4 224 Pfam PF00849 RNA pseudouridylate synthase 33 178 4.0E-19 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_10635 64c39c61fd4ee179055e24fc415c15f4 224 SUPERFAMILY SSF55120 22 220 6.08E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DDU33_10635 64c39c61fd4ee179055e24fc415c15f4 224 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 68 82 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDU33_10635 64c39c61fd4ee179055e24fc415c15f4 224 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 37 208 1.2E-59 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DDU33_10635 64c39c61fd4ee179055e24fc415c15f4 224 Gene3D G3DSA:3.30.70.580 23 96 6.5E-30 T 14-10-2018 DDU33_10635 64c39c61fd4ee179055e24fc415c15f4 224 Gene3D G3DSA:3.30.70.1560 97 197 1.2E-38 T 14-10-2018 DDU33_08200 c9bf1223eb28f2edb95969c764aa7eab 449 SUPERFAMILY SSF111283 14 449 4.32E-122 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DDU33_08200 c9bf1223eb28f2edb95969c764aa7eab 449 Pfam PF01523 Putative modulator of DNA gyrase 33 325 1.1E-54 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DDU33_08200 c9bf1223eb28f2edb95969c764aa7eab 449 Gene3D G3DSA:3.30.2290.10 4 233 1.5E-78 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DDU33_02295 3cd60e96c9aa6683a25b37f5429cac3b 433 Pfam PF03313 Serine dehydratase alpha chain 148 423 3.8E-47 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DDU33_02295 3cd60e96c9aa6683a25b37f5429cac3b 433 PIRSF PIRSF006054 6 430 2.5E-162 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 DDU33_02295 3cd60e96c9aa6683a25b37f5429cac3b 433 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 8 428 35.333 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 DDU33_04880 54dfa99a55e191a26be20181be1dd117 244 Pfam PF04973 Nicotinamide mononucleotide transporter 43 235 2.1E-46 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DDU33_04880 54dfa99a55e191a26be20181be1dd117 244 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 43 239 3.0E-52 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DDU33_04310 21c1fa9a4acd931816a25491e399f7b7 511 SUPERFAMILY SSF53383 19 497 3.56E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_04310 21c1fa9a4acd931816a25491e399f7b7 511 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 313 334 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 DDU33_04310 21c1fa9a4acd931816a25491e399f7b7 511 Gene3D G3DSA:3.40.640.10 114 373 6.2E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_04310 21c1fa9a4acd931816a25491e399f7b7 511 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 79 429 2.0E-60 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 DDU33_04310 21c1fa9a4acd931816a25491e399f7b7 511 Gene3D G3DSA:3.90.1150.170 58 489 6.2E-126 T 14-10-2018 DDU33_09585 4aad03c2517041a96feb089f1cb5438c 472 Pfam PF13751 Transposase DDE domain 324 442 4.2E-29 T 14-10-2018 IPR025668 Transposase DDE domain DDU33_09585 4aad03c2517041a96feb089f1cb5438c 472 Pfam PF05598 Transposase domain (DUF772) 52 126 8.2E-21 T 14-10-2018 IPR008490 Transposase InsH, N-terminal DDU33_01375 50070f27b688509d555b33f89b1c721d 180 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 1.0E-92 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DDU33_01375 50070f27b688509d555b33f89b1c721d 180 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 176 1.9E-84 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DDU33_01375 50070f27b688509d555b33f89b1c721d 180 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 174 4.6E-74 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DDU33_01375 50070f27b688509d555b33f89b1c721d 180 Gene3D G3DSA:2.60.120.10 1 178 9.5E-75 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DDU33_01375 50070f27b688509d555b33f89b1c721d 180 SUPERFAMILY SSF51182 1 177 1.38E-77 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DDU33_10010 745645e34426b019fa6976a534f78a8a 196 Pfam PF03923 Uncharacterized lipoprotein 36 193 2.8E-51 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG DDU33_10290 1e9944f86cf208e537e0c9b82d396543 273 Gene3D G3DSA:3.40.190.10 120 223 2.3E-83 T 14-10-2018 DDU33_10290 1e9944f86cf208e537e0c9b82d396543 273 SUPERFAMILY SSF53850 36 273 1.28E-74 T 14-10-2018 DDU33_10290 1e9944f86cf208e537e0c9b82d396543 273 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 11 273 2.4E-126 T 14-10-2018 IPR004872 Lipoprotein NlpA family DDU33_10290 1e9944f86cf208e537e0c9b82d396543 273 PIRSF PIRSF002854 1 273 2.0E-94 T 14-10-2018 IPR004872 Lipoprotein NlpA family DDU33_10290 1e9944f86cf208e537e0c9b82d396543 273 Gene3D G3DSA:3.40.190.10 38 266 2.3E-83 T 14-10-2018 DDU33_10290 1e9944f86cf208e537e0c9b82d396543 273 Pfam PF03180 NLPA lipoprotein 37 273 1.4E-92 T 14-10-2018 IPR004872 Lipoprotein NlpA family DDU33_00270 fb4b47423b13eca9ffdfa75beb7a84a8 197 SUPERFAMILY SSF52540 2 159 5.32E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_00270 fb4b47423b13eca9ffdfa75beb7a84a8 197 Pfam PF06414 Zeta toxin 6 140 3.5E-5 T 14-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 DDU33_00270 fb4b47423b13eca9ffdfa75beb7a84a8 197 Gene3D G3DSA:3.40.50.300 2 190 3.3E-20 T 14-10-2018 DDU33_03575 c14d9e8d09ce2a04f7947581fc96a765 63 SUPERFAMILY SSF46561 1 61 2.75E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03575 c14d9e8d09ce2a04f7947581fc96a765 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03575 c14d9e8d09ce2a04f7947581fc96a765 63 Pfam PF00831 Ribosomal L29 protein 4 60 4.3E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03575 c14d9e8d09ce2a04f7947581fc96a765 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.0E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03575 c14d9e8d09ce2a04f7947581fc96a765 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.089 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_03575 c14d9e8d09ce2a04f7947581fc96a765 63 Gene3D G3DSA:1.10.287.310 1 62 1.7E-28 T 14-10-2018 DDU33_02210 fca7cba8c0373224d1bbaaeebd526d46 40 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 4.3E-9 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site DDU33_05750 a5221034977dbc0ccd736ed4e9f43c61 221 Pfam PF01930 Domain of unknown function DUF83 26 202 3.2E-36 T 14-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 DDU33_05750 a5221034977dbc0ccd736ed4e9f43c61 221 Gene3D G3DSA:3.90.320.10 14 205 1.0E-17 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DDU33_05750 a5221034977dbc0ccd736ed4e9f43c61 221 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 25 203 2.2E-41 T 14-10-2018 IPR013343 CRISPR-associated protein Cas4 DDU33_10720 f6018f5ba156ef82e82a9f700e504084 177 Pfam PF08534 Redoxin 39 161 1.5E-10 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DDU33_10720 f6018f5ba156ef82e82a9f700e504084 177 SUPERFAMILY SSF52833 42 161 1.51E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_10720 f6018f5ba156ef82e82a9f700e504084 177 Gene3D G3DSA:3.40.30.10 24 175 1.2E-26 T 14-10-2018 DDU33_06520 b2ddd558ef32169bbce03fa27777a5c5 513 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 2 511 5.9E-265 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 DDU33_06520 b2ddd558ef32169bbce03fa27777a5c5 513 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 513 337.802 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 DDU33_06520 b2ddd558ef32169bbce03fa27777a5c5 513 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 4 512 1.5E-263 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 DDU33_06180 60a17a24c35aa3029528e94d2256415c 207 Pfam PF01810 LysE type translocator 10 202 5.0E-40 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DDU33_01475 ec22459960f18423902e0c0b79c9e2b4 284 Pfam PF03631 Virulence factor BrkB 18 265 1.2E-59 T 14-10-2018 IPR017039 Virulence factor BrkB DDU33_01475 ec22459960f18423902e0c0b79c9e2b4 284 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 7 275 21.665 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial DDU33_01475 ec22459960f18423902e0c0b79c9e2b4 284 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 8 265 4.9E-77 T 14-10-2018 IPR017039 Virulence factor BrkB DDU33_01475 ec22459960f18423902e0c0b79c9e2b4 284 PIRSF PIRSF035875 2 282 2.1E-62 T 14-10-2018 IPR017039 Virulence factor BrkB DDU33_03480 c3325b1325e64ea0610bf6c7d75eba85 315 Gene3D G3DSA:3.40.50.2300 34 296 1.1E-91 T 14-10-2018 DDU33_03480 c3325b1325e64ea0610bf6c7d75eba85 315 Gene3D G3DSA:3.40.50.2300 135 305 1.1E-91 T 14-10-2018 DDU33_03480 c3325b1325e64ea0610bf6c7d75eba85 315 Pfam PF13407 Periplasmic binding protein domain 29 288 1.3E-58 T 14-10-2018 IPR025997 Periplasmic binding protein DDU33_03480 c3325b1325e64ea0610bf6c7d75eba85 315 SUPERFAMILY SSF53822 25 313 4.24E-73 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_07985 6886ec8d83ab4db3bf87884421c55d05 140 Pfam PF04241 Protein of unknown function (DUF423) 19 113 5.3E-26 T 14-10-2018 IPR006696 Protein of unknown function DUF423 DDU33_04620 7db28e44eda486ea8ee72bae9f9fe97d 424 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 370 386 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 DDU33_04620 7db28e44eda486ea8ee72bae9f9fe97d 424 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 6 413 1.1E-60 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_04620 7db28e44eda486ea8ee72bae9f9fe97d 424 Pfam PF03600 Citrate transporter 16 347 4.8E-47 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DDU33_04525 272e020675d9bbe8d88838ac0cbdc07b 451 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 397 413 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 DDU33_04525 272e020675d9bbe8d88838ac0cbdc07b 451 Pfam PF00939 Sodium:sulfate symporter transmembrane region 21 448 3.3E-46 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_04525 272e020675d9bbe8d88838ac0cbdc07b 451 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 447 1.7E-99 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DDU33_07775 284578b1d319ef2ef96d684fb6f891cb 69 SUPERFAMILY SSF47413 4 62 1.01E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DDU33_07775 284578b1d319ef2ef96d684fb6f891cb 69 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 5 59 1.2E-16 T 14-10-2018 IPR031856 Putative bacterial antitoxin YdaS DDU33_07775 284578b1d319ef2ef96d684fb6f891cb 69 Gene3D G3DSA:1.10.260.40 1 68 3.9E-18 T 14-10-2018 DDU33_03240 02e14de858ab9e51708b4c4087a0507b 290 Gene3D G3DSA:3.40.50.2300 123 257 6.8E-96 T 14-10-2018 DDU33_03240 02e14de858ab9e51708b4c4087a0507b 290 Pfam PF13407 Periplasmic binding protein domain 25 276 3.2E-60 T 14-10-2018 IPR025997 Periplasmic binding protein DDU33_03240 02e14de858ab9e51708b4c4087a0507b 290 SUPERFAMILY SSF53822 22 290 1.11E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_03240 02e14de858ab9e51708b4c4087a0507b 290 Gene3D G3DSA:3.40.50.2300 29 276 6.8E-96 T 14-10-2018 DDU33_08010 8df698eb9329c5718443e4ae735f8315 169 Pfam PF02316 Mu DNA-binding domain 2 33 1.0E-5 T 14-10-2018 IPR003314 Mu-type HTH domain GO:0003677 DDU33_08010 8df698eb9329c5718443e4ae735f8315 169 Gene3D G3DSA:1.10.10.10 1 45 1.2E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_08010 8df698eb9329c5718443e4ae735f8315 169 SUPERFAMILY SSF46955 3 40 3.57E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DDU33_10825 9fb9301850b6907230035f8a1a837f43 103 Gene3D G3DSA:3.30.300.90 1 89 1.7E-34 T 14-10-2018 DDU33_10825 9fb9301850b6907230035f8a1a837f43 103 Pfam PF01722 BolA-like protein 11 84 1.5E-30 T 14-10-2018 IPR002634 BolA protein DDU33_10825 9fb9301850b6907230035f8a1a837f43 103 PIRSF PIRSF003113 1 100 4.3E-38 T 14-10-2018 IPR002634 BolA protein DDU33_10825 9fb9301850b6907230035f8a1a837f43 103 SUPERFAMILY SSF82657 1 87 6.02E-31 T 14-10-2018 IPR036065 BolA-like superfamily DDU33_00835 8621e2c38f049c6a827babda535be6ff 166 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 2.3E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDU33_00835 8621e2c38f049c6a827babda535be6ff 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 143 5.0E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDU33_00835 8621e2c38f049c6a827babda535be6ff 166 SUPERFAMILY SSF51261 8 164 2.96E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_00835 8621e2c38f049c6a827babda535be6ff 166 Gene3D G3DSA:2.70.70.10 7 166 3.5E-61 T 14-10-2018 IPR011055 Duplicated hybrid motif DDU33_00835 8621e2c38f049c6a827babda535be6ff 166 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 Pfam PF00106 short chain dehydrogenase 2 186 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 4.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 4.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 4.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 4.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 Gene3D G3DSA:3.40.50.720 1 252 9.2E-61 T 14-10-2018 DDU33_10770 35e320c62e41d3af505e1fad73bad130 273 SUPERFAMILY SSF51735 1 268 3.16E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_01890 fca06793e2d5056538dc384dc3ad64c9 179 Gene3D G3DSA:3.40.30.10 18 178 1.1E-39 T 14-10-2018 DDU33_01890 fca06793e2d5056538dc384dc3ad64c9 179 SUPERFAMILY SSF52833 45 176 2.84E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_01890 fca06793e2d5056538dc384dc3ad64c9 179 Pfam PF08534 Redoxin 41 164 4.6E-19 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DDU33_01890 fca06793e2d5056538dc384dc3ad64c9 179 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DDU33_01890 fca06793e2d5056538dc384dc3ad64c9 179 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 176 3.7E-77 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 DDU33_04890 c54bf50985d36dd70105085f95f78d99 321 Pfam PF03916 Polysulphide reductase, NrfD 6 320 2.4E-92 T 14-10-2018 IPR005614 NrfD family DDU33_04890 c54bf50985d36dd70105085f95f78d99 321 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 320 2.4E-147 T 14-10-2018 IPR017566 NrfD DDU33_04890 c54bf50985d36dd70105085f95f78d99 321 Gene3D G3DSA:1.20.1630.10 1 210 1.4E-9 T 14-10-2018 DDU33_09750 850b57c0037bb047558d019cefe4e503 304 SUPERFAMILY SSF56059 104 303 7.88E-46 T 14-10-2018 DDU33_09750 850b57c0037bb047558d019cefe4e503 304 Pfam PF08443 RimK-like ATP-grasp domain 112 300 1.6E-60 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 DDU33_09750 850b57c0037bb047558d019cefe4e503 304 Gene3D G3DSA:3.30.470.80 196 304 6.9E-43 T 14-10-2018 DDU33_09750 850b57c0037bb047558d019cefe4e503 304 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 4 300 9.0E-83 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 DDU33_09750 850b57c0037bb047558d019cefe4e503 304 Gene3D G3DSA:3.30.1490.20 130 194 8.8E-15 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DDU33_09750 850b57c0037bb047558d019cefe4e503 304 Gene3D G3DSA:3.40.50.20 1 129 2.5E-25 T 14-10-2018 DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 PIRSF PIRSF000535 1 310 4.0E-111 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 3 307 8.3E-105 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 SUPERFAMILY SSF53613 4 293 1.56E-71 T 14-10-2018 IPR029056 Ribokinase-like DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 3 307 1.0E-104 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 Gene3D G3DSA:3.40.1190.20 2 310 1.5E-92 T 14-10-2018 IPR029056 Ribokinase-like DDU33_06785 3f5c6569ecf0fc6b741c08d6fa1afdba 310 Pfam PF00294 pfkB family carbohydrate kinase 15 293 8.5E-63 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DDU33_04440 dda2b69e01917e414f2f1d3218313945 263 Pfam PF01578 Cytochrome C assembly protein 44 262 6.5E-23 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 4.7E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 SUPERFAMILY SSF46894 126 225 1.53E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 Gene3D G3DSA:3.40.50.2300 1 121 3.4E-39 T 14-10-2018 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 Gene3D G3DSA:1.10.10.10 126 231 4.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 Pfam PF00072 Response regulator receiver domain 3 113 7.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 SMART SM00862 149 224 5.4E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 2.9E-105 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 SMART SM00448 1 112 1.1E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DDU33_08115 18b9e34c2d6f58a414998389643e15b8 232 SUPERFAMILY SSF52172 2 118 6.55E-39 T 14-10-2018 IPR011006 CheY-like superfamily DDU33_06020 ee8102bca5ceceb79a2cef859a27363c 516 PIRSF PIRSF006446 1 515 9.1E-147 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DDU33_06020 ee8102bca5ceceb79a2cef859a27363c 516 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 4.4E-173 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DDU33_06840 6d2e7b790d7ebddae22fb04067587182 186 Gene3D G3DSA:3.40.80.10 2 185 1.1E-57 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDU33_06840 6d2e7b790d7ebddae22fb04067587182 186 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 167 8.3E-28 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDU33_06840 6d2e7b790d7ebddae22fb04067587182 186 SMART SM00644 16 167 1.9E-53 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDU33_06840 6d2e7b790d7ebddae22fb04067587182 186 SUPERFAMILY SSF55846 2 180 2.22E-63 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DDU33_04680 f14e65801a04f724e016a493a3e5b542 70 Pfam PF04995 Heme exporter protein D (CcmD) 17 60 2.6E-18 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 DDU33_04680 f14e65801a04f724e016a493a3e5b542 70 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 14 59 2.7E-20 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 DDU33_00500 af9e27134cb4b7eb3b5ea6cd49d4caa5 121 Pfam PF07233 Protein of unknown function (DUF1425) 52 120 2.8E-9 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 DDU33_00500 af9e27134cb4b7eb3b5ea6cd49d4caa5 121 Gene3D G3DSA:2.60.40.3230 32 121 3.4E-15 T 14-10-2018 IPR038483 YcfL-like superfamily DDU33_01695 06650d2029a465e31f4488824d11c826 156 Pfam PF03358 NADPH-dependent FMN reductase 5 115 2.0E-24 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DDU33_01695 06650d2029a465e31f4488824d11c826 156 SUPERFAMILY SSF52218 3 148 3.67E-33 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_01695 06650d2029a465e31f4488824d11c826 156 Gene3D G3DSA:3.40.50.360 1 155 1.9E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_07855 8dec292cd8bd556a6d17b57bea20561d 283 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 12 224 1.4E-43 T 14-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 DDU33_06695 775bd80e8f4a31eb8357f34e3ad3a62e 206 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 1 187 24.379 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DDU33_06695 775bd80e8f4a31eb8357f34e3ad3a62e 206 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 185 2.3E-52 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related DDU33_06695 775bd80e8f4a31eb8357f34e3ad3a62e 206 Gene3D G3DSA:2.60.450.10 60 192 2.1E-35 T 14-10-2018 DDU33_06695 775bd80e8f4a31eb8357f34e3ad3a62e 206 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 4 182 3.3E-50 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DDU33_06695 775bd80e8f4a31eb8357f34e3ad3a62e 206 PIRSF PIRSF028513 1 187 2.9E-30 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DDU33_04870 9be3b97497e8677b802b6fed663f75ea 326 Pfam PF00268 Ribonucleotide reductase, small chain 10 282 2.1E-50 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DDU33_04870 9be3b97497e8677b802b6fed663f75ea 326 SUPERFAMILY SSF47240 9 326 4.94E-64 T 14-10-2018 IPR009078 Ferritin-like superfamily DDU33_04870 9be3b97497e8677b802b6fed663f75ea 326 Gene3D G3DSA:1.10.620.20 2 302 5.0E-58 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DDU33_01330 bef47c301fc9fb84f29011b7fec13eaa 472 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 14 472 8.9E-116 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DDU33_01330 bef47c301fc9fb84f29011b7fec13eaa 472 Pfam PF02397 Bacterial sugar transferase 276 465 6.1E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase DDU33_01330 bef47c301fc9fb84f29011b7fec13eaa 472 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 13 472 3.4E-156 T 14-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 DDU33_01775 b87dfaa79dbe9434a965d5d10ef536cf 174 Pfam PF07509 Protein of unknown function (DUF1523) 5 170 3.4E-63 T 14-10-2018 IPR011088 Bacteriophage phiNM3, A0EWY4 DDU33_09230 3e9dd0770adb9210b1a69bc2ff81158e 320 Pfam PF13280 WYL domain 159 312 7.7E-20 T 14-10-2018 IPR026881 WYL domain DDU33_07360 7d96179f30d5b651b506a2fc8a54df01 317 SUPERFAMILY SSF161098 93 300 7.85E-19 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_07360 7d96179f30d5b651b506a2fc8a54df01 317 Gene3D G3DSA:1.10.3720.10 87 309 2.2E-23 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_07360 7d96179f30d5b651b506a2fc8a54df01 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 315 1.3E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_04330 b2c1a1f4432fd26946a8b364ffc97d26 351 Gene3D G3DSA:3.40.50.2000 159 314 1.4E-120 T 14-10-2018 DDU33_04330 b2c1a1f4432fd26946a8b364ffc97d26 351 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 350 35.696 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_04330 b2c1a1f4432fd26946a8b364ffc97d26 351 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 2.4E-48 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_04330 b2c1a1f4432fd26946a8b364ffc97d26 351 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 182 341 4.8E-42 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DDU33_04330 b2c1a1f4432fd26946a8b364ffc97d26 351 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 346 2.4E-115 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DDU33_04330 b2c1a1f4432fd26946a8b364ffc97d26 351 SUPERFAMILY SSF53756 3 348 4.81E-126 T 14-10-2018 DDU33_04330 b2c1a1f4432fd26946a8b364ffc97d26 351 Gene3D G3DSA:3.40.50.2000 6 158 1.4E-120 T 14-10-2018 DDU33_05340 32a2486aae61f2e36f26a025cc8cebc0 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 13 65 6.5E-16 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DDU33_05340 32a2486aae61f2e36f26a025cc8cebc0 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 295 3.8E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_05340 32a2486aae61f2e36f26a025cc8cebc0 296 SUPERFAMILY SSF161098 89 277 2.22E-30 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_05340 32a2486aae61f2e36f26a025cc8cebc0 296 Gene3D G3DSA:1.10.3720.10 84 291 1.0E-24 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_03225 af27ffad1ad0f1686739cc86e51d0517 139 Gene3D G3DSA:3.40.1650.10 8 136 2.6E-39 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDU33_03225 af27ffad1ad0f1686739cc86e51d0517 139 Pfam PF05025 RbsD / FucU transport protein family 1 137 2.2E-49 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDU33_03225 af27ffad1ad0f1686739cc86e51d0517 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.933 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 DDU33_03225 af27ffad1ad0f1686739cc86e51d0517 139 SUPERFAMILY SSF102546 1 139 8.11E-45 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DDU33_10605 3c50722f9a34b12683e412b29773b7ca 208 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 17 200 28.093 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DDU33_10605 3c50722f9a34b12683e412b29773b7ca 208 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 13 196 2.0E-74 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DDU33_10605 3c50722f9a34b12683e412b29773b7ca 208 SUPERFAMILY SSF52540 19 201 8.33E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_10605 3c50722f9a34b12683e412b29773b7ca 208 Gene3D G3DSA:3.40.50.300 4 204 9.5E-60 T 14-10-2018 DDU33_10605 3c50722f9a34b12683e412b29773b7ca 208 Pfam PF01926 50S ribosome-binding GTPase 31 149 2.9E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DDU33_02570 cf77217131107a0b12b1d6198121840f 117 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 117 5.2E-42 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 DDU33_02570 cf77217131107a0b12b1d6198121840f 117 SUPERFAMILY SSF75169 1 117 1.28E-30 T 14-10-2018 IPR027396 DsrEFH-like DDU33_02570 cf77217131107a0b12b1d6198121840f 117 Pfam PF02635 DsrE/DsrF-like family 1 117 2.9E-25 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein DDU33_02570 cf77217131107a0b12b1d6198121840f 117 Gene3D G3DSA:3.40.1260.10 1 117 1.5E-39 T 14-10-2018 IPR027396 DsrEFH-like DDU33_02455 93d7f44c152568ce67f6a5b7735d2cb8 209 Gene3D G3DSA:3.40.30.10 1 84 2.1E-18 T 14-10-2018 DDU33_02455 93d7f44c152568ce67f6a5b7735d2cb8 209 Gene3D G3DSA:1.20.1050.10 85 195 4.8E-39 T 14-10-2018 DDU33_02455 93d7f44c152568ce67f6a5b7735d2cb8 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 75 6.9E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DDU33_02455 93d7f44c152568ce67f6a5b7735d2cb8 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 130 179 3.7E-6 T 14-10-2018 DDU33_02455 93d7f44c152568ce67f6a5b7735d2cb8 209 SUPERFAMILY SSF47616 72 203 6.26E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DDU33_02455 93d7f44c152568ce67f6a5b7735d2cb8 209 SUPERFAMILY SSF52833 1 83 4.58E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DDU33_03325 38230cdd7dc0d920ad7ab5284ec56803 303 SUPERFAMILY SSF63825 47 213 6.93E-14 T 14-10-2018 DDU33_03325 38230cdd7dc0d920ad7ab5284ec56803 303 Gene3D G3DSA:2.130.10.10 36 270 3.3E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DDU33_02765 aad409721d86bb1335f7c9146a52471b 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 162 1.3E-10 T 14-10-2018 IPR001451 Hexapeptide repeat DDU33_02765 aad409721d86bb1335f7c9146a52471b 183 Gene3D G3DSA:2.160.10.10 10 183 1.5E-49 T 14-10-2018 DDU33_02765 aad409721d86bb1335f7c9146a52471b 183 SUPERFAMILY SSF51161 20 182 2.36E-42 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_02765 aad409721d86bb1335f7c9146a52471b 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DDU33_00080 ce7669f43ad39f76611d80865100edc6 109 Gene3D G3DSA:3.40.250.10 2 103 1.2E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DDU33_00080 ce7669f43ad39f76611d80865100edc6 109 SUPERFAMILY SSF52821 2 106 4.98E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DDU33_00080 ce7669f43ad39f76611d80865100edc6 109 Pfam PF00581 Rhodanese-like domain 10 99 4.9E-16 T 14-10-2018 IPR001763 Rhodanese-like domain DDU33_00080 ce7669f43ad39f76611d80865100edc6 109 SMART SM00450 8 103 4.6E-19 T 14-10-2018 IPR001763 Rhodanese-like domain DDU33_00080 ce7669f43ad39f76611d80865100edc6 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 3 106 32.183 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 DDU33_05740 2ded7ce126ab7de5b391e3cd50bd768b 595 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 6 580 6.7E-178 T 14-10-2018 IPR010144 CRISPR-associated protein, Csd1-type DDU33_05740 2ded7ce126ab7de5b391e3cd50bd768b 595 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 3 585 2.2E-177 T 14-10-2018 IPR010144 CRISPR-associated protein, Csd1-type DDU33_01405 20949e5f93d3035f439e71c97bd023df 236 Gene3D G3DSA:3.30.110.170 44 227 2.0E-12 T 14-10-2018 DDU33_01405 20949e5f93d3035f439e71c97bd023df 236 Pfam PF04402 Protein of unknown function (DUF541) 40 230 8.6E-21 T 14-10-2018 IPR007497 Protein of unknown function DUF541 DDU33_01405 20949e5f93d3035f439e71c97bd023df 236 Gene3D G3DSA:3.30.70.2970 48 149 2.0E-12 T 14-10-2018 DDU33_09695 35d957e3cc3bdc484de31f9de4b53ae4 191 Pfam PF04220 Der GTPase activator (YihI) 32 177 3.9E-53 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 DDU33_09695 35d957e3cc3bdc484de31f9de4b53ae4 191 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 185 15.556 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 DDU33_05255 0ef7449eb73b57efb5d4c4dba48f37b8 206 SUPERFAMILY SSF46689 6 80 1.84E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_05255 0ef7449eb73b57efb5d4c4dba48f37b8 206 Gene3D G3DSA:1.10.10.60 5 55 1.2E-23 T 14-10-2018 DDU33_05255 0ef7449eb73b57efb5d4c4dba48f37b8 206 Gene3D G3DSA:1.10.357.10 56 205 1.0E-30 T 14-10-2018 DDU33_05255 0ef7449eb73b57efb5d4c4dba48f37b8 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DDU33_05255 0ef7449eb73b57efb5d4c4dba48f37b8 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 4.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DDU33_09855 516b996769fb50dcd739cc93038cd16b 310 Pfam PF03547 Membrane transport protein 153 303 3.9E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDU33_09855 516b996769fb50dcd739cc93038cd16b 310 Pfam PF03547 Membrane transport protein 10 146 6.8E-9 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DDU33_02490 547812231c7b877a66aa37aa6aeaaf5d 156 Gene3D G3DSA:2.80.10.50 60 154 7.8E-6 T 14-10-2018 DDU33_02490 547812231c7b877a66aa37aa6aeaaf5d 156 SUPERFAMILY SSF50405 93 155 3.66E-5 T 14-10-2018 IPR008999 Actin-crosslinking DDU33_05830 e75513bd7a6b2839815dbcba6d123059 436 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 436 29.093 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DDU33_05830 e75513bd7a6b2839815dbcba6d123059 436 Gene3D G3DSA:3.60.120.10 1 436 2.5E-114 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DDU33_05830 e75513bd7a6b2839815dbcba6d123059 436 Pfam PF00425 chorismate binding enzyme 175 427 8.1E-68 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DDU33_05830 e75513bd7a6b2839815dbcba6d123059 436 SUPERFAMILY SSF56322 46 435 8.9E-90 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DDU33_05830 e75513bd7a6b2839815dbcba6d123059 436 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 434 2.6E-102 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DDU33_03770 232f87214e896caa2af7247daa51af08 305 Gene3D G3DSA:1.10.8.1080 226 303 2.0E-30 T 14-10-2018 DDU33_03770 232f87214e896caa2af7247daa51af08 305 SUPERFAMILY SSF53697 12 256 7.79E-76 T 14-10-2018 DDU33_03770 232f87214e896caa2af7247daa51af08 305 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 6.5E-142 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DDU33_03770 232f87214e896caa2af7247daa51af08 305 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 DDU33_03770 232f87214e896caa2af7247daa51af08 305 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.278 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DDU33_03770 232f87214e896caa2af7247daa51af08 305 Pfam PF01380 SIS domain 135 217 2.6E-11 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DDU33_03770 232f87214e896caa2af7247daa51af08 305 Gene3D G3DSA:3.40.50.10490 8 225 2.5E-86 T 14-10-2018 DDU33_00370 ffbd265c1850446611c880305fc61ae8 124 Hamap MF_00048 UPF0102 protein YraN [yraN]. 10 123 22.42 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 DDU33_00370 ffbd265c1850446611c880305fc61ae8 124 Pfam PF02021 Uncharacterised protein family UPF0102 17 109 1.0E-25 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 DDU33_00370 ffbd265c1850446611c880305fc61ae8 124 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 11 123 3.0E-42 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 DDU33_00370 ffbd265c1850446611c880305fc61ae8 124 Gene3D G3DSA:3.40.1350.10 17 123 1.2E-28 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DDU33_00370 ffbd265c1850446611c880305fc61ae8 124 SUPERFAMILY SSF52980 11 122 4.42E-21 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DDU33_09050 595de74e514ab78ab4d3cd077d69ae76 75 Pfam PF03889 Domain of unknown function 14 51 4.6E-22 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 DDU33_03985 1a00f38d55518ddd48971fb5f94d7d2e 232 Pfam PF01988 VIT family 18 226 6.3E-55 T 14-10-2018 IPR008217 Ccc1 family DDU33_03690 6100003d74ed6521636670028425f2d9 97 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 6 97 1.1E-23 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 DDU33_03690 6100003d74ed6521636670028425f2d9 97 Pfam PF04175 Protein of unknown function (DUF406) 6 97 1.8E-26 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 DDU33_03690 6100003d74ed6521636670028425f2d9 97 Gene3D G3DSA:3.30.70.860 26 97 2.3E-16 T 14-10-2018 IPR035571 UPF0234-like, C-terminal DDU33_04265 16d4b814a10c8bee30ebea2152d5c27a 308 SUPERFAMILY SSF103481 42 142 2.35E-13 T 14-10-2018 DDU33_04265 16d4b814a10c8bee30ebea2152d5c27a 308 Pfam PF00892 EamA-like transporter family 7 140 6.2E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_04265 16d4b814a10c8bee30ebea2152d5c27a 308 Pfam PF00892 EamA-like transporter family 157 295 1.2E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_09370 87dc9084927b2b01d894f9bc005bc824 431 Pfam PF04575 Protein of unknown function (DUF560) 141 431 4.2E-95 T 14-10-2018 IPR007655 Protein of unknown function DUF560 DDU33_09370 87dc9084927b2b01d894f9bc005bc824 431 Gene3D G3DSA:1.25.40.10 57 142 3.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DDU33_02700 a209b2ffc09de704b57f137749f8fdb3 301 Pfam PF03253 Urea transporter 6 282 8.8E-55 T 14-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 DDU33_02700 a209b2ffc09de704b57f137749f8fdb3 301 PIRSF PIRSF016502 1 301 1.6E-70 T 14-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 DDU33_02700 a209b2ffc09de704b57f137749f8fdb3 301 Gene3D G3DSA:1.10.3430.10 1 298 2.0E-63 T 14-10-2018 IPR029020 Ammonium/urea transporter DDU33_10315 2b1eb99836afa114d49aaac23933366d 186 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 17.154 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DDU33_10315 2b1eb99836afa114d49aaac23933366d 186 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 8.6E-62 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DDU33_10315 2b1eb99836afa114d49aaac23933366d 186 Pfam PF04279 Intracellular septation protein A 1 175 1.6E-60 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DDU33_03140 1bc8b4d2226cf8b812504ab84216b5d7 184 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 9 184 1.9E-77 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ DDU33_03140 1bc8b4d2226cf8b812504ab84216b5d7 184 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 9.1E-70 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ DDU33_01710 6de300b5e987155c607ac1f5e2345a2a 147 Pfam PF04972 BON domain 20 84 7.8E-12 T 14-10-2018 IPR007055 BON domain DDU33_01710 6de300b5e987155c607ac1f5e2345a2a 147 SUPERFAMILY SSF54106 94 144 1.44E-7 T 14-10-2018 DDU33_01710 6de300b5e987155c607ac1f5e2345a2a 147 SMART SM00257 95 144 8.5E-12 T 14-10-2018 IPR018392 LysM domain DDU33_01710 6de300b5e987155c607ac1f5e2345a2a 147 Gene3D G3DSA:3.10.350.10 95 143 1.1E-13 T 14-10-2018 IPR036779 LysM domain superfamily DDU33_01710 6de300b5e987155c607ac1f5e2345a2a 147 Pfam PF01476 LysM domain 96 144 1.3E-11 T 14-10-2018 IPR018392 LysM domain DDU33_07965 5311bf72f149fc5a1d5f9a51412fc07b 151 SUPERFAMILY SSF54690 4 150 1.83E-52 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DDU33_07965 5311bf72f149fc5a1d5f9a51412fc07b 151 Pfam PF02391 MoaE protein 8 121 1.7E-36 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DDU33_07965 5311bf72f149fc5a1d5f9a51412fc07b 151 Gene3D G3DSA:3.90.1170.40 1 150 1.2E-51 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DDU33_04945 b1552075b963ff8525a33152998766ad 528 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 370 479 7.1E-20 T 14-10-2018 IPR025299 CstA, C-terminal domain DDU33_04945 b1552075b963ff8525a33152998766ad 528 Pfam PF02554 Carbon starvation protein CstA 4 333 1.6E-44 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 SMART SM00342 300 383 4.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 Gene3D G3DSA:3.40.50.2300 7 268 5.2E-84 T 14-10-2018 DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 Pfam PF12833 Helix-turn-helix domain 308 384 3.7E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 SUPERFAMILY SSF46689 337 384 6.27E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 SUPERFAMILY SSF53822 10 301 9.03E-48 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 Gene3D G3DSA:3.40.50.2300 101 277 5.2E-84 T 14-10-2018 DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 Pfam PF13377 Periplasmic binding protein-like domain 112 276 1.7E-32 T 14-10-2018 DDU33_01770 049923b0a0ca5304e0358d606974c2bf 385 Gene3D G3DSA:1.10.10.60 280 385 2.2E-24 T 14-10-2018 DDU33_03515 4f12d4a6072fcdefe155a9d8fb744d81 69 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 52 2.9E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DDU33_03515 4f12d4a6072fcdefe155a9d8fb744d81 69 Gene3D G3DSA:2.10.260.10 1 68 5.5E-24 T 14-10-2018 DDU33_03515 4f12d4a6072fcdefe155a9d8fb744d81 69 SUPERFAMILY SSF89447 1 65 2.2E-8 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DDU33_05715 576cbe0e3a46083e13e80786bb73e689 463 Pfam PF13289 SIR2-like domain 211 387 7.0E-11 T 14-10-2018 IPR039444 SIR2-like domain DDU33_02120 e4a9691b2e18ab3f587f80e2fe36d0f4 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.06 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DDU33_02120 e4a9691b2e18ab3f587f80e2fe36d0f4 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DDU33_02120 e4a9691b2e18ab3f587f80e2fe36d0f4 144 Gene3D G3DSA:3.100.10.10 67 144 1.7E-12 T 14-10-2018 DDU33_02120 e4a9691b2e18ab3f587f80e2fe36d0f4 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.1E-30 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P DDU33_02120 e4a9691b2e18ab3f587f80e2fe36d0f4 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 6.2E-52 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DDU33_02120 e4a9691b2e18ab3f587f80e2fe36d0f4 144 SUPERFAMILY SSF52080 4 143 1.7E-45 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily DDU33_04460 31ef948942e70389b3a5b3a111a1c4b8 220 Pfam PF03458 UPF0126 domain 91 164 1.7E-21 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 DDU33_04460 31ef948942e70389b3a5b3a111a1c4b8 220 Pfam PF03458 UPF0126 domain 6 79 2.1E-18 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 DDU33_06340 d4cf4b99c1815757309d1db7ce9fbb43 262 Gene3D G3DSA:3.40.50.1980 32 256 2.1E-7 T 14-10-2018 DDU33_06340 d4cf4b99c1815757309d1db7ce9fbb43 262 SUPERFAMILY SSF53807 88 258 4.71E-13 T 14-10-2018 DDU33_09830 ebc59ffafc861e531bdfa18d793bc128 76 Pfam PF07119 Protein of unknown function (DUF1375) 15 74 1.2E-10 T 14-10-2018 IPR010780 Protein of unknown function DUF1375 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 879 17.874 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 Gene3D G3DSA:1.20.1440.90 301 388 2.2E-21 T 14-10-2018 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 SUPERFAMILY SSF51621 6 879 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 5.8E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 5.8E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 5.8E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 5.8E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 5.8E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 5.8E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 5.8E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_06700 d7ed129c9efb129dfe91785f19787522 879 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 879 2.4E-284 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DDU33_08390 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 75 97 8.9E-34 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 DDU33_08390 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 11 27 8.9E-34 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 DDU33_08390 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 130 151 8.9E-34 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 DDU33_08390 30527335c054c2c84176624dae6c34c7 160 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 53 71 8.9E-34 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 DDU33_08390 30527335c054c2c84176624dae6c34c7 160 Pfam PF02794 RTX toxin acyltransferase family 9 132 7.4E-42 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 1.5E-125 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 148 168 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 282 301 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 37 56 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 337 356 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 316 334 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 221 240 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 83 103 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 PRINTS PR00166 Aromatic amino acid permease signature 10 33 5.4E-83 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site DDU33_05635 207ec5a8e6b9508790bad896e45ce906 404 Pfam PF03222 Tryptophan/tyrosine permease family 1 390 7.1E-124 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DDU33_06220 780fa56823f83ea0a8094867b6642c0a 226 ProDom PD123385 COMPETENCE COMA A DNA TRANSFORMATION 52 186 4.0E-5 T 14-10-2018 DDU33_10175 f6a86af271270768279552c49bb8df98 283 SUPERFAMILY SSF53448 6 187 7.31E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_10175 f6a86af271270768279552c49bb8df98 283 Gene3D G3DSA:3.90.550.10 7 212 4.7E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DDU33_10175 f6a86af271270768279552c49bb8df98 283 Pfam PF00535 Glycosyl transferase family 2 17 156 8.5E-10 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DDU33_03320 7636a88dbb4ee88b7fe49bb125316002 359 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 351 8.8E-74 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DDU33_03320 7636a88dbb4ee88b7fe49bb125316002 359 Gene3D G3DSA:3.20.20.190 29 357 2.6E-119 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DDU33_03320 7636a88dbb4ee88b7fe49bb125316002 359 SUPERFAMILY SSF51695 32 356 1.75E-88 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DDU33_00140 fad1ed0f0a543bdb9204c6af29e60a73 126 SUPERFAMILY SSF82649 2 124 5.75E-34 T 14-10-2018 DDU33_00140 fad1ed0f0a543bdb9204c6af29e60a73 126 Gene3D G3DSA:3.90.1010.10 1 126 2.1E-31 T 14-10-2018 DDU33_00140 fad1ed0f0a543bdb9204c6af29e60a73 126 Pfam PF02657 Fe-S metabolism associated domain 8 123 2.1E-33 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like DDU33_05155 b1568e2be7eab0909dee1ece295c0a2f 59 Pfam PF00005 ABC transporter 17 52 6.0E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DDU33_05155 b1568e2be7eab0909dee1ece295c0a2f 59 SUPERFAMILY SSF52540 9 50 1.39E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DDU33_05155 b1568e2be7eab0909dee1ece295c0a2f 59 Gene3D G3DSA:3.40.50.300 1 56 5.2E-10 T 14-10-2018 DDU33_02575 9f030bf7c1bd53d1246736a5fcadebf9 122 Gene3D G3DSA:3.40.1260.10 1 122 1.7E-36 T 14-10-2018 IPR027396 DsrEFH-like DDU33_02575 9f030bf7c1bd53d1246736a5fcadebf9 122 Pfam PF02635 DsrE/DsrF-like family 4 122 1.4E-22 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein DDU33_02575 9f030bf7c1bd53d1246736a5fcadebf9 122 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 122 1.0E-42 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF DDU33_02575 9f030bf7c1bd53d1246736a5fcadebf9 122 SUPERFAMILY SSF75169 4 122 4.45E-33 T 14-10-2018 IPR027396 DsrEFH-like DDU33_01195 b6df0934e7d022920bf3a64d82ce8f23 277 Gene3D G3DSA:3.40.50.1980 22 143 1.3E-38 T 14-10-2018 DDU33_01195 b6df0934e7d022920bf3a64d82ce8f23 277 SUPERFAMILY SSF53807 18 269 1.18E-47 T 14-10-2018 DDU33_01195 b6df0934e7d022920bf3a64d82ce8f23 277 Pfam PF01497 Periplasmic binding protein 26 249 9.6E-21 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DDU33_01195 b6df0934e7d022920bf3a64d82ce8f23 277 Gene3D G3DSA:3.40.50.1980 144 276 2.5E-39 T 14-10-2018 DDU33_02545 73106d4fc3d1cfc4f8c043ab60a99cb2 116 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 115 17.165 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DDU33_02545 73106d4fc3d1cfc4f8c043ab60a99cb2 116 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 110 9.8E-20 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 Pfam PF01578 Cytochrome C assembly protein 89 297 7.4E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.7E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 2.5E-121 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 5.5E-280 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 8.0E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 8.0E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 8.0E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 8.0E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 8.0E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 8.0E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04690 9f0e909a7491acfe5559b5a69a9725b8 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 8.0E-58 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_02205 e8413bed056b1674c3b052f571a7630e 369 Pfam PF13556 PucR C-terminal helix-turn-helix domain 309 365 9.3E-18 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DDU33_02205 e8413bed056b1674c3b052f571a7630e 369 Gene3D G3DSA:1.10.10.2840 244 369 6.5E-19 T 14-10-2018 DDU33_02205 e8413bed056b1674c3b052f571a7630e 369 Pfam PF05651 Putative sugar diacid recognition 3 135 5.3E-48 T 14-10-2018 IPR008599 Putative sugar diacid recognition DDU33_04185 9c960a075145d48ecc5e70928489257c 296 Gene3D G3DSA:1.10.3720.10 1 283 2.8E-72 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_04185 9c960a075145d48ecc5e70928489257c 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 9.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_04185 9c960a075145d48ecc5e70928489257c 296 SUPERFAMILY SSF161098 10 296 1.03E-66 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_10675 9cb590ecb8dc1de5fa195ddd25703095 312 Pfam PF02687 FtsX-like permease family 212 303 8.9E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DDU33_10675 9cb590ecb8dc1de5fa195ddd25703095 312 PIRSF PIRSF003097 7 307 1.6E-70 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 DDU33_10675 9cb590ecb8dc1de5fa195ddd25703095 312 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 7 308 9.4E-123 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 DDU33_01165 e8cad1e918ddc2075c9186d4ba17c8cd 249 Pfam PF04333 MlaA lipoprotein 30 222 1.3E-65 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DDU33_01165 e8cad1e918ddc2075c9186d4ba17c8cd 249 PRINTS PR01805 VacJ lipoprotein signature 138 155 2.0E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DDU33_01165 e8cad1e918ddc2075c9186d4ba17c8cd 249 PRINTS PR01805 VacJ lipoprotein signature 49 65 2.0E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DDU33_01165 e8cad1e918ddc2075c9186d4ba17c8cd 249 PRINTS PR01805 VacJ lipoprotein signature 31 44 2.0E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DDU33_01165 e8cad1e918ddc2075c9186d4ba17c8cd 249 PRINTS PR01805 VacJ lipoprotein signature 100 117 2.0E-31 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DDU33_10830 2788078d0c0b853674c24b588894499e 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 248 7.7E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_10830 2788078d0c0b853674c24b588894499e 255 SUPERFAMILY SSF161098 4 253 9.42E-55 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_10830 2788078d0c0b853674c24b588894499e 255 Gene3D G3DSA:1.10.3720.10 3 255 5.6E-48 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_10625 17f2f2ee96bd48bbe8ee379a9414f689 155 Pfam PF04186 FxsA cytoplasmic membrane protein 10 115 1.6E-29 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 DDU33_07305 958ac38fa3765a619d57c1eb04c14aa0 238 Pfam PF03400 IS1 transposase 103 217 4.8E-23 T 14-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 DDU33_01565 37e236d017cbc0c09df976006cc763c8 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 416 3.6E-121 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DDU33_01565 37e236d017cbc0c09df976006cc763c8 425 PIRSF PIRSF006066 1 425 2.5E-144 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DDU33_01565 37e236d017cbc0c09df976006cc763c8 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 419 7.5E-151 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DDU33_04980 b6db5e7366812a8a1ae42b4a04f4c07a 365 Gene3D G3DSA:2.40.160.10 22 364 3.3E-41 T 14-10-2018 IPR023614 Porin domain superfamily DDU33_04980 b6db5e7366812a8a1ae42b4a04f4c07a 365 Pfam PF13609 Gram-negative porin 5 299 5.4E-17 T 14-10-2018 DDU33_04980 b6db5e7366812a8a1ae42b4a04f4c07a 365 SUPERFAMILY SSF56935 28 364 2.62E-38 T 14-10-2018 DDU33_07345 b21689c0c3874fe42e5d0404fd8cad1e 170 SUPERFAMILY SSF55729 3 150 6.23E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DDU33_07345 b21689c0c3874fe42e5d0404fd8cad1e 170 Gene3D G3DSA:3.40.630.30 1 169 2.9E-35 T 14-10-2018 DDU33_07345 b21689c0c3874fe42e5d0404fd8cad1e 170 Pfam PF13420 Acetyltransferase (GNAT) domain 3 149 8.1E-13 T 14-10-2018 DDU33_03700 b7e3902d5f09c66cb15329743a38249a 256 SUPERFAMILY SSF160355 29 218 5.23E-30 T 14-10-2018 DDU33_03700 b7e3902d5f09c66cb15329743a38249a 256 Gene3D G3DSA:3.30.1890.10 29 221 5.9E-27 T 14-10-2018 DDU33_06485 8c92b256b0efeef933e7b4ce0b1f379f 167 Pfam PF00210 Ferritin-like domain 7 141 6.8E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DDU33_06485 8c92b256b0efeef933e7b4ce0b1f379f 167 SUPERFAMILY SSF47240 4 160 4.39E-55 T 14-10-2018 IPR009078 Ferritin-like superfamily DDU33_06485 8c92b256b0efeef933e7b4ce0b1f379f 167 Gene3D G3DSA:1.20.1260.10 1 166 5.6E-48 T 14-10-2018 IPR012347 Ferritin-like DDU33_00455 d41d55be7367c5314dd636aee382e8ec 213 Pfam PF05494 MlaC protein 35 200 7.1E-51 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DDU33_00455 d41d55be7367c5314dd636aee382e8ec 213 Gene3D G3DSA:3.10.450.710 26 207 1.2E-42 T 14-10-2018 DDU33_00455 d41d55be7367c5314dd636aee382e8ec 213 PIRSF PIRSF004649 1 213 7.1E-57 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 8.0E-64 T 14-10-2018 DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 8.0E-64 T 14-10-2018 DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 132 155 8.0E-64 T 14-10-2018 DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 193 216 8.0E-64 T 14-10-2018 DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 8.0E-64 T 14-10-2018 DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 8.0E-64 T 14-10-2018 DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 Pfam PF03379 CcmB protein 4 217 2.0E-82 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 PIRSF PIRSF002764 1 220 4.3E-76 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DDU33_04670 28b246d80ca01bb55d7fd8ce43903173 220 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 216 3.9E-86 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DDU33_03450 663d18293398f2cf3bc00ac35c7ddc1d 224 Gene3D G3DSA:3.40.50.10610 71 224 1.0E-6 T 14-10-2018 DDU33_03450 663d18293398f2cf3bc00ac35c7ddc1d 224 SUPERFAMILY SSF52964 64 145 8.5E-9 T 14-10-2018 DDU33_03450 663d18293398f2cf3bc00ac35c7ddc1d 224 Pfam PF03783 Curli production assembly/transport component CsgG 42 220 3.8E-32 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 DDU33_09720 0948890d6e805c02f85f172e91830ead 288 Pfam PF05661 Protein of unknown function (DUF808) 4 277 5.5E-104 T 14-10-2018 IPR008526 Inner membrane protein YedI DDU33_09720 0948890d6e805c02f85f172e91830ead 288 PIRSF PIRSF016660 1 288 1.8E-107 T 14-10-2018 IPR008526 Inner membrane protein YedI DDU33_08695 113613da05518c10abfaba72d2bbc1a8 253 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 251 1.2E-98 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 DDU33_08695 113613da05518c10abfaba72d2bbc1a8 253 PIRSF PIRSF029037 1 253 4.2E-93 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 DDU33_09515 a6466eaa56f4aee0cd1683b3d39faab4 120 Pfam PF03788 LrgA family 20 110 2.2E-22 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 DDU33_04605 68d5dc17b4711ac7cea1720fe97d41a0 435 PIRSF PIRSF015658 1 432 8.3E-176 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 DDU33_04605 68d5dc17b4711ac7cea1720fe97d41a0 435 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 4.5E-194 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 DDU33_04605 68d5dc17b4711ac7cea1720fe97d41a0 435 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 8.6E-159 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 DDU33_01390 13fa6ea94d760b5d9be2fc07ac4f26f9 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 3.2E-160 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DDU33_01390 13fa6ea94d760b5d9be2fc07ac4f26f9 354 Gene3D G3DSA:3.40.50.720 2 325 3.9E-139 T 14-10-2018 DDU33_01390 13fa6ea94d760b5d9be2fc07ac4f26f9 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 1.0E-99 T 14-10-2018 IPR016040 NAD(P)-binding domain DDU33_01390 13fa6ea94d760b5d9be2fc07ac4f26f9 354 Gene3D G3DSA:3.90.25.10 201 333 3.9E-139 T 14-10-2018 DDU33_01390 13fa6ea94d760b5d9be2fc07ac4f26f9 354 SUPERFAMILY SSF51735 1 337 2.99E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DDU33_03485 bde06c02db39d2095c0a994ee783ff39 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 318 2.8E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DDU33_04115 2bebc944537ab5ccdb57c8ba4334fcab 104 Pfam PF17344 Family of unknown function (DUF5374) 57 96 1.2E-18 T 14-10-2018 IPR020511 Uncharacterised protein family HI0941 DDU33_04115 2bebc944537ab5ccdb57c8ba4334fcab 104 ProDom PD068240 PRECURSOR SIGNAL HI0941 PM0962 23 97 2.0E-6 T 14-10-2018 IPR020511 Uncharacterised protein family HI0941 DDU33_09005 c9382d985c2975df53e816c095a118b6 205 Pfam PF06226 Protein of unknown function (DUF1007) 6 204 1.0E-47 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 DDU33_09005 c9382d985c2975df53e816c095a118b6 205 PIRSF PIRSF008159 1 205 2.1E-53 T 14-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, DDU33_06825 8d88784490de68e0b42468e8173dbfe9 428 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 48 387 3.2E-116 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX DDU33_04555 27d6c3f0655ab847f0724e71e5b35e44 296 PIRSF PIRSF037505 182 296 0.13 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DDU33_04555 27d6c3f0655ab847f0724e71e5b35e44 296 PIRSF PIRSF037505 3 113 2.5E-4 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DDU33_04555 27d6c3f0655ab847f0724e71e5b35e44 296 SUPERFAMILY SSF82282 3 296 1.83E-70 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DDU33_04555 27d6c3f0655ab847f0724e71e5b35e44 296 Pfam PF02574 Homocysteine S-methyltransferase 5 293 3.5E-54 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DDU33_04555 27d6c3f0655ab847f0724e71e5b35e44 296 Gene3D G3DSA:3.20.20.330 1 296 2.3E-64 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DDU33_07465 bf6f4438426eb57aeff0b593266628dd 183 ProDom PD487572 PRECURSOR PM0067 HI0983 SIGNAL 27 182 1.0E-41 T 14-10-2018 DDU33_04105 4687278944d84b37bcd481f2721628db 235 PIRSF PIRSF004525 6 234 1.5E-44 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted DDU33_03965 99818e2c1cf74c7e851c8aec01417928 228 SUPERFAMILY SSF51161 49 195 3.6E-11 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DDU33_03965 99818e2c1cf74c7e851c8aec01417928 228 Gene3D G3DSA:2.160.10.10 42 218 9.1E-7 T 14-10-2018 DDU33_10550 95665ecfdc756406315fd574c1694e68 354 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 2 350 26.507 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 DDU33_10550 95665ecfdc756406315fd574c1694e68 354 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 7 348 5.2E-128 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 DDU33_10550 95665ecfdc756406315fd574c1694e68 354 Pfam PF03116 NQR2, RnfD, RnfE family 5 348 9.4E-99 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 DDU33_08810 05c20dc2bfcdf32215bebc63d9f756f1 205 SUPERFAMILY SSF142795 1 203 4.45E-87 T 14-10-2018 IPR037226 CAC2185-like superfamily DDU33_08810 05c20dc2bfcdf32215bebc63d9f756f1 205 Pfam PF08942 Domain of unknown function (DUF1919) 9 202 7.8E-85 T 14-10-2018 IPR015037 Protein of unknown function DUF1919 DDU33_07590 7c41fbbc919099b6c2c603dd8ee911e2 94 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 2.5E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DDU33_07590 7c41fbbc919099b6c2c603dd8ee911e2 94 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.183 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 DDU33_02385 d5e1bed025570fe49d36d707fd11062a 123 Pfam PF06803 Protein of unknown function (DUF1232) 61 96 2.8E-14 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 DDU33_02385 d5e1bed025570fe49d36d707fd11062a 123 PIRSF PIRSF031804 1 123 9.6E-44 T 14-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 DDU33_01190 24286ba7f8bf24807d9151180f9aec38 330 SUPERFAMILY SSF81345 4 324 9.55E-85 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_01190 24286ba7f8bf24807d9151180f9aec38 330 Gene3D G3DSA:1.10.3470.10 2 328 2.9E-117 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DDU33_01190 24286ba7f8bf24807d9151180f9aec38 330 Pfam PF01032 FecCD transport family 15 324 2.1E-96 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DDU33_04395 00f73ee6f27908ed98c0ed8e9580fdb1 289 Pfam PF04393 Protein of unknown function (DUF535) 21 284 6.3E-82 T 14-10-2018 IPR007488 Protein of unknown function DUF535 DDU33_06875 5a344dadd61e425fe1831dcec7ccc04c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 2.8E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_06875 5a344dadd61e425fe1831dcec7ccc04c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 2.8E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_06875 5a344dadd61e425fe1831dcec7ccc04c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 2.8E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_06875 5a344dadd61e425fe1831dcec7ccc04c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 2.8E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_06875 5a344dadd61e425fe1831dcec7ccc04c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 135 159 2.8E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_06875 5a344dadd61e425fe1831dcec7ccc04c 253 Pfam PF01061 ABC-2 type transporter 6 215 3.5E-38 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DDU33_06875 5a344dadd61e425fe1831dcec7ccc04c 253 PIRSF PIRSF006648 3 250 5.2E-29 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_00950 05841928dca6f85c6b749bead253fd13 228 Gene3D G3DSA:3.30.1380.10 10 199 4.4E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDU33_00950 05841928dca6f85c6b749bead253fd13 228 SUPERFAMILY SSF55166 23 186 7.59E-20 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDU33_00950 05841928dca6f85c6b749bead253fd13 228 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 30 186 1.2E-40 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 DDU33_05660 6d99ad739035c46cb3cbc97d57de12d3 906 Pfam PF11739 Dicarboxylate transport 693 893 7.9E-52 T 14-10-2018 IPR021730 Dicarboxylate transport DDU33_01570 40ba10e753ccbb397e618dcebbfa6115 160 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 150 1.9E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DDU33_07930 bb6c2bc02bc6195bebe74ca3ca5447c4 175 Pfam PF09684 Phage tail protein (Tail_P2_I) 29 105 2.4E-4 T 14-10-2018 IPR006521 Tail protein I DDU33_02680 333113d5a4d846baaa2e192bb1cb0d1c 110 SUPERFAMILY SSF103481 6 106 2.75E-19 T 14-10-2018 DDU33_02680 333113d5a4d846baaa2e192bb1cb0d1c 110 Gene3D G3DSA:1.10.3730.20 1 110 3.1E-34 T 14-10-2018 DDU33_02680 333113d5a4d846baaa2e192bb1cb0d1c 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 9.2E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DDU33_04785 0ebcdf22369570023ee1b849637d9387 145 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 100 145 2.0E-8 T 14-10-2018 DDU33_04785 0ebcdf22369570023ee1b849637d9387 145 Pfam PF04191 Phospholipid methyltransferase 38 134 7.3E-13 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 DDU33_04785 0ebcdf22369570023ee1b849637d9387 145 Gene3D G3DSA:1.20.120.1630 4 145 1.4E-24 T 14-10-2018 DDU33_01155 5f7c407c61fdf21537c9b53ab7d8af80 78 Pfam PF06196 Protein of unknown function (DUF997) 4 74 5.6E-24 T 14-10-2018 IPR010398 Protein of unknown function DUF997 DDU33_01155 5f7c407c61fdf21537c9b53ab7d8af80 78 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 4 71 9.0E-18 T 14-10-2018 IPR010398 Protein of unknown function DUF997 DDU33_05085 eef8debfd0cf63e87e56e6e664a575ca 185 Pfam PF05951 Bacterial protein of unknown function (DUF882) 36 182 1.2E-48 T 14-10-2018 IPR010275 Protein of unknown function DUF882 DDU33_05085 eef8debfd0cf63e87e56e6e664a575ca 185 SUPERFAMILY SSF55166 65 183 7.85E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDU33_05085 eef8debfd0cf63e87e56e6e664a575ca 185 Gene3D G3DSA:3.30.1380.10 63 185 1.3E-13 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DDU33_07995 a61596870a52e16b5cfc9893c4158460 138 Pfam PF05232 Chlorhexidine efflux transporter 2 61 5.8E-16 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter DDU33_07995 a61596870a52e16b5cfc9893c4158460 138 Pfam PF05232 Chlorhexidine efflux transporter 69 131 2.3E-23 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter DDU33_05415 3919b62e2cf212af9e413e3f98587beb 116 Gene3D G3DSA:3.40.1260.10 1 116 3.1E-32 T 14-10-2018 IPR027396 DsrEFH-like DDU33_05415 3919b62e2cf212af9e413e3f98587beb 116 SUPERFAMILY SSF75169 1 116 6.02E-32 T 14-10-2018 IPR027396 DsrEFH-like DDU33_05415 3919b62e2cf212af9e413e3f98587beb 116 Pfam PF02635 DsrE/DsrF-like family 2 116 5.3E-22 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein DDU33_09645 67b419a491c8d93fbb314b7a53b2657f 203 Pfam PF09335 SNARE associated Golgi protein 29 156 3.9E-25 T 14-10-2018 IPR032816 SNARE associated Golgi protein DDU33_06450 b8fc8036794ac97d0390fad32b6de346 186 SUPERFAMILY SSF81301 46 183 1.37E-14 T 14-10-2018 DDU33_06450 b8fc8036794ac97d0390fad32b6de346 186 Pfam PF04607 Region found in RelA / SpoT proteins 74 183 1.6E-8 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DDU33_06450 b8fc8036794ac97d0390fad32b6de346 186 SMART SM00954 73 184 0.0012 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DDU33_06450 b8fc8036794ac97d0390fad32b6de346 186 Gene3D G3DSA:3.30.460.10 41 167 6.5E-8 T 14-10-2018 DDU33_03115 2def6a93dc0fc818cffb826a8503315a 691 Pfam PF05159 Capsule polysaccharide biosynthesis protein 384 638 3.7E-40 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 DDU33_03115 2def6a93dc0fc818cffb826a8503315a 691 Pfam PF05159 Capsule polysaccharide biosynthesis protein 41 305 4.2E-64 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 DDU33_01705 82512268d721444b4907bb0f2f313168 150 Gene3D G3DSA:1.20.1260.50 1 150 1.6E-53 T 14-10-2018 DDU33_09090 df76ddcb1821e03cd76df0baec8d1d06 103 Gene3D G3DSA:1.20.1440.40 1 102 4.1E-31 T 14-10-2018 IPR036814 YqcC-like superfamily DDU33_09090 df76ddcb1821e03cd76df0baec8d1d06 103 PIRSF PIRSF006257 1 103 3.5E-35 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 DDU33_09090 df76ddcb1821e03cd76df0baec8d1d06 103 Pfam PF04287 tRNA pseudouridine synthase C 5 99 2.0E-32 T 14-10-2018 IPR023376 YqcC-like domain DDU33_09090 df76ddcb1821e03cd76df0baec8d1d06 103 SUPERFAMILY SSF158452 2 102 9.42E-35 T 14-10-2018 IPR036814 YqcC-like superfamily DDU33_09680 2a5ad659d88cf3276484e361ebc49a7d 780 Gene3D G3DSA:2.60.450.10 43 140 4.6E-9 T 14-10-2018 DDU33_09680 2a5ad659d88cf3276484e361ebc49a7d 780 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 757 18.976 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 DDU33_09680 2a5ad659d88cf3276484e361ebc49a7d 780 Pfam PF03968 OstA-like protein 51 185 8.4E-23 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DDU33_09680 2a5ad659d88cf3276484e361ebc49a7d 780 Pfam PF04453 Organic solvent tolerance protein 298 685 5.4E-102 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 DDU33_02360 81d930fd6d109ede1b857e6e8746d0e7 226 Gene3D G3DSA:3.20.20.70 1 226 1.6E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DDU33_02360 81d930fd6d109ede1b857e6e8746d0e7 226 SMART SM00934 5 217 1.4E-27 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_02360 81d930fd6d109ede1b857e6e8746d0e7 226 SUPERFAMILY SSF51366 1 225 7.76E-35 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DDU33_02360 81d930fd6d109ede1b857e6e8746d0e7 226 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 214 7.1E-24 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DDU33_06710 d0192d49af4d5ff15db6a2f4d24c0c2c 149 Pfam PF04536 TPM domain 14 126 1.7E-15 T 14-10-2018 IPR007621 TPM domain DDU33_06710 d0192d49af4d5ff15db6a2f4d24c0c2c 149 Gene3D G3DSA:3.10.310.50 8 148 6.1E-43 T 14-10-2018 DDU33_07430 65629fd12b4579f5cf34d207eb65f37e 238 Gene3D G3DSA:1.10.10.2260 87 195 5.9E-43 T 14-10-2018 DDU33_07430 65629fd12b4579f5cf34d207eb65f37e 238 Pfam PF04288 MukE-like family 10 234 1.5E-117 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 DDU33_07430 65629fd12b4579f5cf34d207eb65f37e 238 Gene3D G3DSA:1.10.10.2250 1 81 8.7E-38 T 14-10-2018 DDU33_09845 dcb7be59ae413d6688abe4b2ebe095ed 470 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 450 2.9E-71 T 14-10-2018 IPR010352 Protein of unknown function DUF945 DDU33_08715 efb15ddfa3ccf7f39c714b10321ec8bf 512 Pfam PF00884 Sulfatase 194 470 9.2E-30 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DDU33_08715 efb15ddfa3ccf7f39c714b10321ec8bf 512 ProDom PD055757 TRANSFERASE HYDROLASE PHOSPHORYLETHANOLAMINE METAL-DEPENDENT MEMBRANE-ASSOCIATED PRECURSOR PREDICTED PE--LIPOOLIGOSACCHARIDE SIGNAL HI1063 447 512 6.0E-21 T 14-10-2018 IPR020098 Uncharacterised domain HI1063, transferase-like DDU33_08715 efb15ddfa3ccf7f39c714b10321ec8bf 512 Gene3D G3DSA:3.40.720.10 182 499 2.5E-46 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DDU33_08715 efb15ddfa3ccf7f39c714b10321ec8bf 512 SUPERFAMILY SSF53649 196 415 8.04E-15 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DDU33_10440 44ccd8422792741b4bcb81a1b9ac949f 316 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 311 4.1E-143 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DDU33_10440 44ccd8422792741b4bcb81a1b9ac949f 316 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 299 5.6E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DDU33_10440 44ccd8422792741b4bcb81a1b9ac949f 316 SUPERFAMILY SSF53686 4 309 1.7E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DDU33_10440 44ccd8422792741b4bcb81a1b9ac949f 316 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DDU33_10440 44ccd8422792741b4bcb81a1b9ac949f 316 Gene3D G3DSA:3.40.50.1100 11 306 6.5E-126 T 14-10-2018 DDU33_10440 44ccd8422792741b4bcb81a1b9ac949f 316 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 311 3.3E-134 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DDU33_10440 44ccd8422792741b4bcb81a1b9ac949f 316 Gene3D G3DSA:3.40.50.1100 43 145 6.5E-126 T 14-10-2018 DDU33_08445 383f6effcc4cd4d8e89e8849d400e559 72 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 72 15.889 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 DDU33_08445 383f6effcc4cd4d8e89e8849d400e559 72 Gene3D G3DSA:1.20.5.340 1 72 5.3E-21 T 14-10-2018 DDU33_08445 383f6effcc4cd4d8e89e8849d400e559 72 Pfam PF06005 Cell division protein ZapB 1 71 7.2E-22 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 DDU33_00620 95802d3f545039befb44fd5f9ab8aefa 232 ProDom PD884061 6-PHOSPHOGLUCONOLACTONASE HYDROLASE 6PGL HI0557 1 28 3.0E-6 T 14-10-2018 DDU33_00620 95802d3f545039befb44fd5f9ab8aefa 232 Gene3D G3DSA:3.40.50.1360 1 232 9.1E-81 T 14-10-2018 DDU33_00620 95802d3f545039befb44fd5f9ab8aefa 232 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 222 1.1E-59 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DDU33_00620 95802d3f545039befb44fd5f9ab8aefa 232 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 231 2.0E-55 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 DDU33_00620 95802d3f545039befb44fd5f9ab8aefa 232 SUPERFAMILY SSF100950 1 232 2.72E-64 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DDU33_10750 3e9a15a772d2e8b12968d21f5c4b20ef 104 Pfam PF10818 Protein of unknown function (DUF2547) 9 102 6.7E-19 T 14-10-2018 IPR020508 Protein of unknown function DUF2547 DDU33_03970 4c9f0066fc70308b34208c8305bc40ed 269 SUPERFAMILY SSF82771 12 92 8.37E-5 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DDU33_03705 7e9d104c017b53fedae9aa6b1e21d658 354 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 4 344 1.6E-140 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 DDU33_03705 7e9d104c017b53fedae9aa6b1e21d658 354 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 346 26.676 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 DDU33_03705 7e9d104c017b53fedae9aa6b1e21d658 354 Pfam PF00953 Glycosyl transferase family 4 71 227 1.0E-27 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DDU33_03130 96fb5d07dd740812e0ed565804c789d8 120 Pfam PF02411 MerT mercuric transport protein 15 114 8.7E-10 T 14-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 DDU33_07875 b91f05168ee065b5a73a875fb6949836 158 Pfam PF06891 P2 phage tail completion protein R (GpR) 9 139 4.4E-26 T 14-10-2018 IPR009678 Bacteriophage tail completion protein R DDU33_05180 1034b91158deb2d9dea213b0254f80e0 189 Pfam PF04315 Elongation factor P hydroxylase 14 184 1.6E-72 T 14-10-2018 IPR007411 Elongation factor P hydroxylase DDU33_08960 5f4814dadd6b326bcdb0ce4f7ed0b751 655 SUPERFAMILY SSF53649 285 600 3.53E-69 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DDU33_08960 5f4814dadd6b326bcdb0ce4f7ed0b751 655 Gene3D G3DSA:3.40.720.10 278 564 2.7E-139 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DDU33_08960 5f4814dadd6b326bcdb0ce4f7ed0b751 655 Gene3D G3DSA:3.30.1120.80 277 644 2.7E-139 T 14-10-2018 DDU33_08960 5f4814dadd6b326bcdb0ce4f7ed0b751 655 Pfam PF00884 Sulfatase 287 557 2.6E-46 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DDU33_08960 5f4814dadd6b326bcdb0ce4f7ed0b751 655 PIRSF PIRSF005091 5 650 1.9E-124 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like DDU33_00445 46c233c92a20ab8ec9507b1b5cba1f62 86 Pfam PF01722 BolA-like protein 18 74 4.4E-12 T 14-10-2018 IPR002634 BolA protein DDU33_00445 46c233c92a20ab8ec9507b1b5cba1f62 86 SUPERFAMILY SSF82657 2 80 7.19E-23 T 14-10-2018 IPR036065 BolA-like superfamily DDU33_00445 46c233c92a20ab8ec9507b1b5cba1f62 86 PIRSF PIRSF003113 1 85 1.5E-20 T 14-10-2018 IPR002634 BolA protein DDU33_00445 46c233c92a20ab8ec9507b1b5cba1f62 86 Gene3D G3DSA:3.30.300.90 1 85 4.9E-24 T 14-10-2018 DDU33_07825 5f9a05739fd2557f00f461fdeb8b2e1f 151 Gene3D G3DSA:1.10.3420.10 11 150 1.4E-14 T 14-10-2018 IPR023292 NTP pyrophosphohydrolase-like domain superfamily DDU33_08945 9bb786256f1ceda8859fa2c27653d342 136 SUPERFAMILY SSF53062 1 125 9.68E-33 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DDU33_08945 9bb786256f1ceda8859fa2c27653d342 136 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 125 7.3E-39 T 14-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain DDU33_08945 9bb786256f1ceda8859fa2c27653d342 136 Pfam PF03610 PTS system fructose IIA component 4 117 5.1E-26 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DDU33_08945 9bb786256f1ceda8859fa2c27653d342 136 Gene3D G3DSA:3.40.50.510 1 130 2.1E-43 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DDU33_02525 8cc711a49e0e32c79ef2c0a716a44dea 265 Pfam PF01061 ABC-2 type transporter 19 227 2.4E-28 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DDU33_02525 8cc711a49e0e32c79ef2c0a716a44dea 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 113 138 6.2E-58 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_02525 8cc711a49e0e32c79ef2c0a716a44dea 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 184 203 6.2E-58 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_02525 8cc711a49e0e32c79ef2c0a716a44dea 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 70 92 6.2E-58 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_02525 8cc711a49e0e32c79ef2c0a716a44dea 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 147 171 6.2E-58 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_02525 8cc711a49e0e32c79ef2c0a716a44dea 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 204 223 6.2E-58 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_02525 8cc711a49e0e32c79ef2c0a716a44dea 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 39 60 6.2E-58 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DDU33_09245 536c89159a2bc76cdc87ced36f2718fa 214 Pfam PF01478 Type IV leader peptidase family 87 182 4.4E-6 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 DDU33_01025 86accbdb73ae228a2966c6ecfc36bb4d 193 SUPERFAMILY SSF52218 1 182 2.27E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_01025 86accbdb73ae228a2966c6ecfc36bb4d 193 Pfam PF02525 Flavodoxin-like fold 1 169 5.9E-46 T 14-10-2018 IPR003680 Flavodoxin-like fold DDU33_01025 86accbdb73ae228a2966c6ecfc36bb4d 193 Gene3D G3DSA:3.40.50.360 1 192 2.2E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DDU33_05460 58a22de109d9dcd04a04916172283572 217 SUPERFAMILY SSF56925 24 217 7.06E-26 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DDU33_05460 58a22de109d9dcd04a04916172283572 217 Gene3D G3DSA:2.40.160.20 22 217 1.4E-61 T 14-10-2018 DDU33_05460 58a22de109d9dcd04a04916172283572 217 Pfam PF03922 OmpW family 23 217 6.8E-54 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 DDU33_05490 57051c45971f43fccb21c093269c1a06 92 PIRSF PIRSF002599 2 90 3.8E-11 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DDU33_05490 57051c45971f43fccb21c093269c1a06 92 Pfam PF06961 Protein of unknown function (DUF1294) 12 66 1.2E-23 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 DDU33_05550 0f8fc6766249eb9cfb18a14ae7d1cb3d 348 PIRSF PIRSF006268 1 348 1.1E-87 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DDU33_05550 0f8fc6766249eb9cfb18a14ae7d1cb3d 348 Gene3D G3DSA:3.10.520.20 13 348 1.0E-107 T 14-10-2018 DDU33_05550 0f8fc6766249eb9cfb18a14ae7d1cb3d 348 SUPERFAMILY SSF143631 24 347 1.33E-91 T 14-10-2018 IPR003374 ApbE-like superfamily DDU33_05550 0f8fc6766249eb9cfb18a14ae7d1cb3d 348 Pfam PF02424 ApbE family 31 323 7.0E-82 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DDU33_10200 2133e2e718842bf62d9006e4530e5d4f 148 Gene3D G3DSA:2.10.109.10 22 136 2.8E-13 T 14-10-2018 DDU33_10200 2133e2e718842bf62d9006e4530e5d4f 148 SUPERFAMILY SSF51306 31 132 6.28E-15 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DDU33_10835 7bdf40feb098870ebfd35f96aacd7cdb 286 Gene3D G3DSA:1.10.3720.10 6 281 7.5E-52 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_10835 7bdf40feb098870ebfd35f96aacd7cdb 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 9.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DDU33_10835 7bdf40feb098870ebfd35f96aacd7cdb 286 SUPERFAMILY SSF161098 4 275 6.93E-52 T 14-10-2018 IPR035906 MetI-like superfamily DDU33_10310 39b012600214cedb45ab005d58e684e5 157 Gene3D G3DSA:3.10.129.10 3 156 2.4E-42 T 14-10-2018 DDU33_10310 39b012600214cedb45ab005d58e684e5 157 Pfam PF03061 Thioesterase superfamily 28 100 1.1E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DDU33_10310 39b012600214cedb45ab005d58e684e5 157 SUPERFAMILY SSF54637 10 141 9.1E-40 T 14-10-2018 IPR029069 HotDog domain superfamily DDU33_05130 c2c2a7510f6161c26bf344f3c4b973d8 154 Pfam PF05433 Glycine zipper 2TM domain 62 102 4.2E-7 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DDU33_03235 9a97f8919a845006280c565999416bd1 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 307 1.9E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DDU33_01440 30f840beaf4ba71870c2e8482406daa4 142 SUPERFAMILY SSF103481 42 141 1.83E-18 T 14-10-2018 DDU33_01440 30f840beaf4ba71870c2e8482406daa4 142 Pfam PF00892 EamA-like transporter family 5 138 8.4E-26 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DDU33_09280 e297f2e3df59c27cff89cdfb929d7aec 254 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.4E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DDU33_08875 bce895304e837487bd962bc3a3034cb7 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 153 5.8E-32 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DDU33_08875 bce895304e837487bd962bc3a3034cb7 162 PIRSF PIRSF018472 2 162 3.6E-42 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type DDU33_08875 bce895304e837487bd962bc3a3034cb7 162 Pfam PF04093 rod shape-determining protein MreD 6 154 4.1E-38 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DDU33_10705 1dc8df951dfbc6a0e887fde8e190499d 835 Pfam PF01295 Adenylate cyclase, class-I 245 823 5.1E-227 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 DDU33_10705 1dc8df951dfbc6a0e887fde8e190499d 835 Pfam PF12633 Adenylate cyclase NT domain 36 225 2.6E-70 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 DDU33_10705 1dc8df951dfbc6a0e887fde8e190499d 835 PIRSF PIRSF001444 30 835 2.6E-280 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 DDU33_05820 bf400e8b074759ff55c32ebb92bc47e1 304 Pfam PF03956 Lysine exporter LysO 115 298 2.9E-52 T 14-10-2018 IPR005642 Lysine exporter LysO DDU33_05820 bf400e8b074759ff55c32ebb92bc47e1 304 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 133 298 4.0E-52 T 14-10-2018 IPR005642 Lysine exporter LysO DDU33_01935 13adecc728a0e4ca4af962ebc0e61a0a 67 Pfam PF05433 Glycine zipper 2TM domain 30 65 4.4E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DDU33_05835 15e796101b8515ed687fbc82a611bb27 405 Gene3D G3DSA:3.90.1150.10 22 398 4.0E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DDU33_05835 15e796101b8515ed687fbc82a611bb27 405 Pfam PF00155 Aminotransferase class I and II 37 391 7.1E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DDU33_05835 15e796101b8515ed687fbc82a611bb27 405 SUPERFAMILY SSF53383 6 402 2.63E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DDU33_05835 15e796101b8515ed687fbc82a611bb27 405 Gene3D G3DSA:3.40.640.10 53 294 4.0E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DDU33_00685 0f9704ba21b258cbba8ff4577477a4d7 161 Gene3D G3DSA:3.30.1330.60 26 161 6.4E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_00685 0f9704ba21b258cbba8ff4577477a4d7 161 Pfam PF00691 OmpA family 54 145 8.8E-21 T 14-10-2018 IPR006665 OmpA-like domain DDU33_00685 0f9704ba21b258cbba8ff4577477a4d7 161 PRINTS PR01021 OMPA domain signature 100 116 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_00685 0f9704ba21b258cbba8ff4577477a4d7 161 PRINTS PR01021 OMPA domain signature 55 77 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_00685 0f9704ba21b258cbba8ff4577477a4d7 161 PRINTS PR01021 OMPA domain signature 85 100 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DDU33_00685 0f9704ba21b258cbba8ff4577477a4d7 161 SUPERFAMILY SSF103088 45 159 7.72E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily DDU33_04110 fb0ddb19fdc7cb68d6235026ec5a0ec5 216 ProDom PD115088 TRANSMEMBRANE MEMBRANE PRECURSOR HI0940 SIGNAL PM0963 66 209 6.0E-4 T 14-10-2018 DDU33_04110 fb0ddb19fdc7cb68d6235026ec5a0ec5 216 Pfam PF10833 Protein of unknown function (DUF2572) 14 204 1.6E-10 T 14-10-2018 IPR022543 Protein of unknown function DUF2572 DDU33_09615 73e41f5b524a79d12c62cca5a4c8727f 511 Pfam PF03553 Na+/H+ antiporter family 167 483 1.7E-88 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DDU33_04540 ef0fb9130fb9be6967ffab96550ce058 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 277 4.6E-109 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DDU33_04540 ef0fb9130fb9be6967ffab96550ce058 278 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 277 2.5E-134 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DDU33_07860 25800fafeaab6abe155ca970f221605a 342 Pfam PF05125 Phage major capsid protein, P2 family 9 328 6.3E-94 T 14-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid DDU33_07860 25800fafeaab6abe155ca970f221605a 342 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 9 331 7.2E-97 T 14-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid DDU33_01045 0cb5ef0362eaa2de8e726a2c83f1c873 194 Pfam PF09335 SNARE associated Golgi protein 53 155 2.2E-13 T 14-10-2018 IPR032816 SNARE associated Golgi protein DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 Gene3D G3DSA:2.150.10.10 728 890 8.2E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 754 771 0.049 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 736 753 0.61 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 772 788 0.061 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 794 809 23.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 Pfam PF08339 RTX C-terminal domain 810 956 2.2E-51 T 14-10-2018 IPR013550 RTX, C-terminal DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 343 361 2.3E-78 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 737 758 2.3E-78 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 538 562 2.3E-78 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 487 508 2.3E-78 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 434 450 2.3E-78 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 399 419 2.3E-78 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 277 298 2.3E-78 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR00313 NodO calcium binding signature 782 791 8.6E-9 T 14-10-2018 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR00313 NodO calcium binding signature 773 781 8.6E-9 T 14-10-2018 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR00313 NodO calcium binding signature 743 754 8.6E-9 T 14-10-2018 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 PRINTS PR00313 NodO calcium binding signature 755 763 8.6E-9 T 14-10-2018 DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 SUPERFAMILY SSF51120 605 853 1.44E-33 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DDU33_08395 6389d29d27f6effddfbace3c63f0ede4 956 Pfam PF02382 RTX N-terminal domain 6 654 0.0 T 14-10-2018 IPR018504 RTX N-terminal GO:0005509|GO:0005576|GO:0009405 DDU33_10495 fbc4862f0cfe2f5ee85f0b4f4a558500 196 Pfam PF04222 Protein of unknown function (DUF416) 4 193 3.5E-80 T 14-10-2018 IPR007338 Protein of unknown function DUF416 DDU33_10495 fbc4862f0cfe2f5ee85f0b4f4a558500 196 Gene3D G3DSA:1.20.1590.10 1 195 2.2E-64 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily DDU33_08225 8beff5ae46eed6a5ddbb38c39a0b793f 139 Pfam PF04386 Stringent starvation protein B 4 124 1.0E-28 T 14-10-2018 IPR007481 Stringent starvation protein B DDU33_08225 8beff5ae46eed6a5ddbb38c39a0b793f 139 PIRSF PIRSF005276 1 139 1.4E-50 T 14-10-2018 IPR007481 Stringent starvation protein B DDU33_08225 8beff5ae46eed6a5ddbb38c39a0b793f 139 Gene3D G3DSA:2.30.30.220 1 126 1.6E-42 T 14-10-2018 IPR036760 SspB-like superfamily DDU33_08225 8beff5ae46eed6a5ddbb38c39a0b793f 139 SUPERFAMILY SSF101738 1 110 5.23E-41 T 14-10-2018 IPR036760 SspB-like superfamily DDU33_09400 1721eaf77c76e6763e5fc37e7bb0b38f 210 Pfam PF10946 Protein of unknown function DUF2625 4 183 1.6E-68 T 14-10-2018 IPR021239 Protein of unknown function DUF2625 DDU33_01115 f42e8fbc84b7706ab048bbb080aeefc9 264 Pfam PF03609 PTS system sorbose-specific iic component 4 235 1.0E-77 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DDU33_01115 f42e8fbc84b7706ab048bbb080aeefc9 264 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 260 5.2E-107 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DDU33_10005 1e7aaceb0bafb383c946a49d73ae831c 205 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 197 1.6E-38 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DDU33_10005 1e7aaceb0bafb383c946a49d73ae831c 205 Pfam PF01914 MarC family integral membrane protein 4 200 6.7E-41 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DDU33_07805 2c32801778ac55c6fcdc69e1404b0f1b 783 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 198 517 2.4E-94 T 14-10-2018 IPR008766 Replication gene A protein GO:0006260 DDU33_06125 177133d1752b0906089fd6ee07c3e51f 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 9 356 1.8E-127 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 DDU33_06125 177133d1752b0906089fd6ee07c3e51f 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 355 1.6E-66 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DDU33_02715 d7a598aaf352db0f8619524a5f43836f 201 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 197 2.4E-36 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 DDU33_02715 d7a598aaf352db0f8619524a5f43836f 201 Gene3D G3DSA:1.10.1760.20 1 197 1.4E-28 T 14-10-2018 DDU33_02520 167adeefd850c3933cfb3dc859bcf163 370 TIGRFAM TIGR01010 BexC_CtrB_KpsE: polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 10 370 5.9E-170 T 14-10-2018 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD GO:0005351|GO:0009276|GO:0015774 DDU33_04835 135bc577706c0fde591187e3ef2a35c9 650 PIRSF PIRSF015380 2 650 5.2E-268 T 14-10-2018 IPR011385 Putative site-specific recombinase Gcr DDU33_04835 135bc577706c0fde591187e3ef2a35c9 650 Pfam PF10136 Site-specific recombinase 27 649 1.2E-211 T 14-10-2018 IPR011385 Putative site-specific recombinase Gcr DDU33_10580 273bc7ff7b43f5c42b1b28b8c59e0719 886 Pfam PF02470 MlaD protein 644 732 1.0E-9 T 14-10-2018 IPR003399 Mce/MlaD DDU33_10580 273bc7ff7b43f5c42b1b28b8c59e0719 886 Pfam PF02470 MlaD protein 43 133 9.4E-14 T 14-10-2018 IPR003399 Mce/MlaD DDU33_10580 273bc7ff7b43f5c42b1b28b8c59e0719 886 Pfam PF02470 MlaD protein 165 220 1.7E-6 T 14-10-2018 IPR003399 Mce/MlaD DDU33_10580 273bc7ff7b43f5c42b1b28b8c59e0719 886 Pfam PF02470 MlaD protein 756 816 9.7E-10 T 14-10-2018 IPR003399 Mce/MlaD DDU33_06050 8d4fd7d889377d375798afc6aba45af1 226 TIGRFAM TIGR02796 tolQ: protein TolQ 7 220 7.1E-91 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DDU33_06050 8d4fd7d889377d375798afc6aba45af1 226 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 42.192 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DDU33_06050 8d4fd7d889377d375798afc6aba45af1 226 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 9.1E-40 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DDU33_05890 fe26ae31ad84b29d05a932f78155fb2f 322 Pfam PF04230 Polysaccharide pyruvyl transferase 35 293 1.2E-24 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase DDU33_05455 f90ef37fae3090ea1df304e029778add 516 Pfam PF00916 Sulfate permease family 10 380 4.8E-56 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DDU33_09510 d45b4bfea49743685df46eb5f7227ac7 228 Pfam PF04172 LrgB-like family 9 221 4.3E-67 T 14-10-2018 IPR007300 CidB/LrgB family DDU33_10260 b10479f43c6086c159847785d2adf5b5 434 Pfam PF00999 Sodium/hydrogen exchanger family 12 416 2.9E-48 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DDU33_03175 f72ab64764288d66031e7c47d6abf2d2 126 Pfam PF03899 ATP synthase I chain 15 108 1.0E-15 T 14-10-2018 IPR005598 ATP synthase protein I DDU33_06995 d75580de3084d67883c0e7cee34b5de7 47 Pfam PF12669 Virus attachment protein p12 family 3 47 1.7E-8 T 14-10-2018 DDU33_01545 8e6d32f917f5965b78f0f6c40f46dd27 250 Pfam PF01435 Peptidase family M48 51 236 2.2E-29 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DDU33_07710 481eca910770d2e58b47390be92dbf29 110 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 24.828 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DDU33_07710 481eca910770d2e58b47390be92dbf29 110 Pfam PF04363 Protein of unknown function (DUF496) 9 99 8.4E-43 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DDU33_07710 481eca910770d2e58b47390be92dbf29 110 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 104 2.0E-44 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DDU33_07710 481eca910770d2e58b47390be92dbf29 110 PIRSF PIRSF028773 1 110 3.7E-50 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DDU33_05800 48fa828de172befe50c1cbbf65d4eafc 165 Pfam PF09335 SNARE associated Golgi protein 41 154 7.7E-9 T 14-10-2018 IPR032816 SNARE associated Golgi protein DDU33_00790 22e906d042c7e02baec09ff54e21f32b 128 SUPERFAMILY SSF55021 70 107 4.84E-5 T 14-10-2018 DDU33_00790 22e906d042c7e02baec09ff54e21f32b 128 Gene3D G3DSA:3.30.2130.10 2 124 2.7E-12 T 14-10-2018 DDU33_00875 3f3945e8574a02834745cc3f4655d0ae 120 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 16 109 9.5E-25 T 14-10-2018 IPR009241 Toxin HigB-like DDU33_02975 b3f690fac8aca499d05ade955b9fe2d5 281 Gene3D G3DSA:3.60.15.10 19 280 2.0E-65 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_02975 b3f690fac8aca499d05ade955b9fe2d5 281 Pfam PF12706 Beta-lactamase superfamily domain 43 235 1.1E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase DDU33_02975 b3f690fac8aca499d05ade955b9fe2d5 281 SUPERFAMILY SSF56281 28 267 3.11E-14 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DDU33_10595 3bc593d1dd64a0640cc5139f354bb49f 275 Pfam PF02535 ZIP Zinc transporter 111 270 2.0E-15 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 DDU33_09730 458e67a31e65257d5ec9f35e8af4a3dd 201 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 195 6.7E-37 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 DDU33_04600 6f960f17e92895361bfc2adc228ceb1e 229 Gene3D G3DSA:3.40.50.2020 89 229 3.9E-16 T 14-10-2018 DDU33_04600 6f960f17e92895361bfc2adc228ceb1e 229 SUPERFAMILY SSF53271 49 227 8.09E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DDU33_02915 b97d6ee83f6d1016a6d564fda84b42ea 251 Pfam PF12686 Protein of unknown function (DUF3800) 10 218 6.4E-26 T 14-10-2018 IPR024524 Protein of unknown function DUF3800 DDU33_07295 ae4f1ddbc4496c477cb209119277ff1d 1153 Pfam PF13332 Haemagluttinin repeat 34 171 2.6E-7 T 14-10-2018 IPR025157 Hemagglutinin repeat DDU33_07295 ae4f1ddbc4496c477cb209119277ff1d 1153 Pfam PF13332 Haemagluttinin repeat 281 444 2.1E-33 T 14-10-2018 IPR025157 Hemagglutinin repeat DDU33_01075 56c10bb718eb6247423a5f2d8d376ba5 193 Pfam PF05656 Protein of unknown function (DUF805) 12 177 1.8E-23 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 DDU33_04455 e6b6532c00731e005afdeab1a72ad9dc 30 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 29 6.7E-10 T 14-10-2018 IPR031596 Putative methionine and alanine importer, small subunit DDU33_00380 1c1a446c52a66595e45f06fdf5d0e7b8 195 Pfam PF04972 BON domain 50 117 2.1E-13 T 14-10-2018 IPR007055 BON domain DDU33_00380 1c1a446c52a66595e45f06fdf5d0e7b8 195 Pfam PF04972 BON domain 129 194 9.6E-15 T 14-10-2018 IPR007055 BON domain DDU33_00380 1c1a446c52a66595e45f06fdf5d0e7b8 195 SMART SM00749 133 195 6.4E-6 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DDU33_00380 1c1a446c52a66595e45f06fdf5d0e7b8 195 SMART SM00749 55 118 1.4E-7 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DDU33_04100 91a547c1e227897ed0feb37623ec71ca 173 SUPERFAMILY SSF54523 5 80 7.14E-7 T 14-10-2018 DDU33_04410 e69ae3e94399e56a3b8ea538a8dee848 113 Pfam PF04320 Protein with unknown function (DUF469) 8 107 1.2E-38 T 14-10-2018 IPR007416 Protein of unknown function DUF469 DDU33_00655 fbf46c3df24ff547f32050b6ca6607b7 105 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 100 2.0E-36 T 14-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 DDU33_00655 fbf46c3df24ff547f32050b6ca6607b7 105 PIRSF PIRSF019302 1 105 1.2E-40 T 14-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 DDU33_08805 5a532990b0ef74a7c2aface6cb2b22d3 172 Pfam PF07445 Primosomal replication protein priC 4 166 9.2E-18 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC DDU33_06030 99c972cf1ddcfce7d1631a82a2079047 32 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.1E-8 T 14-10-2018 IPR012994 Membrane bound YbgT-like DDU33_01615 98565e345895508e175bc8fcfcf00265 221 SUPERFAMILY SSF53474 3 206 6.76E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DDU33_01615 98565e345895508e175bc8fcfcf00265 221 Pfam PF04301 Protein of unknown function (DUF452) 3 213 1.8E-79 T 14-10-2018 IPR007398 Protein of unknown function DUF452 DDU33_04435 a3a7fbfdf6e006f2ac9b2dfd403d8f6d 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 172 2.6E-18 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DDU33_07840 b58416fbe02904194b19951f4a4f0b44 91 Pfam PF04606 Ogr/Delta-like zinc finger 11 52 6.8E-15 T 14-10-2018 IPR007684 Zinc finger, Ogr/Delta-type DDU33_00315 37edfabb613edf8d96ed238c708e43b2 251 Pfam PF16872 Putative phage abortive infection protein 45 120 3.1E-16 T 14-10-2018 IPR031709 Putative phage abortive infection protein DDU33_06110 66568e9e358b9766d9e548233f8c33f8 354 Pfam PF01594 AI-2E family transporter 12 330 2.1E-65 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DDU33_06495 661beda1b56e9684239df7a632908754 433 Pfam PF00860 Permease family 14 393 2.0E-81 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DDU33_04490 e0bc4a298323a5c16155d1025d8d74bb 311 Pfam PF04657 Putative inner membrane exporter, YdcZ 2 141 2.5E-40 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ DDU33_04490 e0bc4a298323a5c16155d1025d8d74bb 311 Pfam PF04657 Putative inner membrane exporter, YdcZ 163 304 3.3E-36 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ DDU33_03275 3e9c7d845770db23a9262f7d4b680d63 205 Pfam PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 2 203 9.0E-86 T 14-10-2018 IPR019722 Glucose-6-phosphate 1-dehydrogenase, bacterial DDU33_09630 6a65da34e62f0060d5fe14cfd10f776b 237 Pfam PF02698 DUF218 domain 72 207 5.0E-16 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DDU33_00400 bc418e6ad9ee04bb9aa4f003a14f1a47 373 Pfam PF12698 ABC-2 family transporter protein 24 362 2.9E-29 T 14-10-2018 DDU33_10325 44e3e52812902f9837cb7746ea86fce6 144 Pfam PF04217 Protein of unknown function, DUF412 3 142 1.1E-49 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 DDU33_03660 3dc3cb2e03701048d63810618ea521fc 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 260 1.1E-49 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DDU33_03885 30c4d55e8104ad233b91589248a837ea 470 Pfam PF04225 Opacity-associated protein A LysM-like domain 394 469 1.7E-23 T 14-10-2018 IPR007340 Opacity-associated protein A DDU33_01825 e9bddd08e4577571e7878389c9198661 263 Pfam PF10670 Domain of unknown function (DUF4198) 17 238 3.5E-38 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 DDU33_08620 3b22407dc646a10901ee64ef227a0f4d 420 Pfam PF01384 Phosphate transporter family 26 408 9.0E-108 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652