locus-tag class description DLE03_00005 PF01668 SmpB protein DLE03_00010 PF18075 FtsX extracellular domain DLE03_00010 PF02687 FtsX-like permease family DLE03_00015 PF00005 ABC transporter DLE03_00020 PF03462 PCRF domain DLE03_00020 PF00472 RF-1 domain DLE03_00055 PF00437 Type II/IV secretion system protein DLE03_00075 PF00676 Dehydrogenase E1 component DLE03_00075 PF16078 2-oxoglutarate dehydrogenase N-terminus DLE03_00075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DLE03_00075 PF02779 Transketolase, pyrimidine binding domain DLE03_00075 PF16870 2-oxoglutarate dehydrogenase C-terminal DLE03_00080 PF00462 Glutaredoxin DLE03_00090 PF09055 Nickel-containing superoxide dismutase DLE03_00105 PF08281 Sigma-70, region 4 DLE03_00105 PF04542 Sigma-70 region 2 DLE03_00110 PF02586 SOS response associated peptidase (SRAP) DLE03_00115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DLE03_00120 PF03193 RsgA GTPase DLE03_00125 PF00459 Inositol monophosphatase family DLE03_00130 PF00403 Heavy-metal-associated domain DLE03_00150 PF03699 Uncharacterised protein family (UPF0182) DLE03_00155 PF02190 ATP-dependent protease La (LON) substrate-binding domain DLE03_00155 PF05362 Lon protease (S16) C-terminal proteolytic domain DLE03_00155 PF00004 ATPase family associated with various cellular activities (AAA) DLE03_00185 PF02467 Transcription factor WhiB DLE03_00190 PF13361 UvrD-like helicase C-terminal domain DLE03_00190 PF00570 HRDC domain DLE03_00190 PF00580 UvrD/REP helicase N-terminal domain DLE03_00195 PF09297 NADH pyrophosphatase zinc ribbon domain DLE03_00195 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DLE03_00195 PF00293 NUDIX domain DLE03_00205 PF00141 Peroxidase DLE03_00210 PF13361 UvrD-like helicase C-terminal domain DLE03_00210 PF00580 UvrD/REP helicase N-terminal domain DLE03_00210 PF00570 HRDC domain DLE03_00215 PF00580 UvrD/REP helicase N-terminal domain DLE03_00215 PF13361 UvrD-like helicase C-terminal domain DLE03_00225 PF01926 50S ribosome-binding GTPase DLE03_00225 PF06071 Protein of unknown function (DUF933) DLE03_00230 PF02646 RmuC family DLE03_00245 PF02401 LytB protein DLE03_00250 PF02601 Exonuclease VII, large subunit DLE03_00250 PF13742 OB-fold nucleic acid binding domain DLE03_00255 PF02609 Exonuclease VII small subunit DLE03_00260 PF05681 Fumarate hydratase (Fumerase) DLE03_00260 PF05683 Fumarase C-terminus DLE03_00270 PF02562 PhoH-like protein DLE03_00270 PF13638 PIN domain DLE03_00290 PF03449 Transcription elongation factor, N-terminal DLE03_00290 PF01272 Transcription elongation factor, GreA/GreB, C-term DLE03_00295 PF01061 ABC-2 type transporter DLE03_00300 PF00005 ABC transporter DLE03_00305 PF07690 Major Facilitator Superfamily DLE03_00310 PF07690 Major Facilitator Superfamily DLE03_00335 PF03167 Uracil DNA glycosylase superfamily DLE03_00340 PF02541 Ppx/GppA phosphatase family DLE03_00355 PF03952 Enolase, N-terminal domain DLE03_00355 PF00113 Enolase, C-terminal TIM barrel domain DLE03_00360 PF03819 MazG nucleotide pyrophosphohydrolase domain DLE03_00370 PF03461 TRCF domain DLE03_00370 PF02559 CarD-like/TRCF domain DLE03_00370 PF00271 Helicase conserved C-terminal domain DLE03_00370 PF17757 UvrB interaction domain DLE03_00370 PF00270 DEAD/DEAH box helicase DLE03_00375 PF00311 Phosphoenolpyruvate carboxylase DLE03_00380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DLE03_00380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DLE03_00385 PF01195 Peptidyl-tRNA hydrolase DLE03_00390 PF14693 Ribosomal protein TL5, C-terminal domain DLE03_00390 PF01386 Ribosomal L25p family DLE03_00395 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DLE03_00395 PF14572 Phosphoribosyl synthetase-associated domain DLE03_00400 PF12804 MobA-like NTP transferase domain DLE03_00400 PF00132 Bacterial transferase hexapeptide (six repeats) DLE03_00415 PF08544 GHMP kinases C terminal DLE03_00415 PF00288 GHMP kinases N terminal domain DLE03_00420 PF00398 Ribosomal RNA adenine dimethylase DLE03_00425 PF01026 TatD related DNase DLE03_00430 PF09334 tRNA synthetases class I (M) DLE03_00430 PF08264 Anticodon-binding domain of tRNA DLE03_00435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DLE03_00440 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase DLE03_00440 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DLE03_00455 PF00994 Probable molybdopterin binding domain DLE03_00455 PF03453 MoeA N-terminal region (domain I and II) DLE03_00455 PF03454 MoeA C-terminal region (domain IV) DLE03_00460 PF01812 5-formyltetrahydrofolate cyclo-ligase family DLE03_00465 PF02770 Acyl-CoA dehydrogenase, middle domain DLE03_00465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLE03_00465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLE03_00470 PF05425 Copper resistance protein D DLE03_00470 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DLE03_00485 PF03176 MMPL family DLE03_00490 PF00551 Formyl transferase DLE03_00490 PF01842 ACT domain DLE03_00510 PF00106 short chain dehydrogenase DLE03_00515 PF00270 DEAD/DEAH box helicase DLE03_00515 PF00271 Helicase conserved C-terminal domain DLE03_00525 PF13426 PAS domain DLE03_00525 PF05231 MASE1 DLE03_00525 PF00563 EAL domain DLE03_00525 PF00990 Diguanylate cyclase, GGDEF domain DLE03_00525 PF08448 PAS fold DLE03_00525 PF08447 PAS fold DLE03_00535 PF00285 Citrate synthase, C-terminal domain DLE03_00540 PF01243 Pyridoxamine 5'-phosphate oxidase DLE03_00540 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DLE03_00545 PF00266 Aminotransferase class-V DLE03_00555 PF07690 Major Facilitator Superfamily DLE03_00565 PF00313 'Cold-shock' DNA-binding domain DLE03_00570 PF11228 Protein of unknown function (DUF3027) DLE03_00575 PF00118 TCP-1/cpn60 chaperonin family DLE03_00585 PF11066 Protein of unknown function (DUF2867) DLE03_00585 PF13460 NAD(P)H-binding DLE03_00590 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLE03_00595 PF12697 Alpha/beta hydrolase family DLE03_00600 PF00484 Carbonic anhydrase DLE03_00610 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DLE03_00610 PF16353 Domain of unknown function(DUF4981) DLE03_00610 PF02929 Beta galactosidase small chain DLE03_00610 PF00703 Glycosyl hydrolases family 2 DLE03_00610 PF02837 Glycosyl hydrolases family 2, sugar binding domain DLE03_00620 PF08032 RNA 2'-O ribose methyltransferase substrate binding DLE03_00620 PF00588 SpoU rRNA Methylase family DLE03_00625 PF01406 tRNA synthetases class I (C) catalytic domain DLE03_00625 PF09190 DALR domain DLE03_00630 PF02542 YgbB family DLE03_00630 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DLE03_00635 PF02559 CarD-like/TRCF domain DLE03_00645 PF00300 Histidine phosphatase superfamily (branch 1) DLE03_00650 PF10722 Putative bacterial sensory transduction regulator DLE03_00655 PF00534 Glycosyl transferases group 1 DLE03_00655 PF13439 Glycosyltransferase Family 4 DLE03_00665 PF08768 Domain of unknown function (DUF1794) DLE03_00670 PF08241 Methyltransferase domain DLE03_00680 PF01475 Ferric uptake regulator family DLE03_00685 PF07210 Protein of unknown function (DUF1416) DLE03_00690 PF00581 Rhodanese-like domain DLE03_00705 PF00486 Transcriptional regulatory protein, C terminal DLE03_00710 PF00583 Acetyltransferase (GNAT) family DLE03_00715 PF00202 Aminotransferase class-III DLE03_00730 PF03928 Haem-degrading DLE03_00735 PF00248 Aldo/keto reductase family DLE03_00750 PF00970 Oxidoreductase FAD-binding domain DLE03_00750 PF00175 Oxidoreductase NAD-binding domain DLE03_00750 PF00042 Globin DLE03_00755 PF01370 NAD dependent epimerase/dehydratase family DLE03_00760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DLE03_00760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DLE03_00760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DLE03_00785 PF00005 ABC transporter DLE03_00785 PF00664 ABC transporter transmembrane region DLE03_00790 PF01531 Glycosyl transferase family 11 DLE03_00795 PF00535 Glycosyl transferase family 2 DLE03_00835 PF01370 NAD dependent epimerase/dehydratase family DLE03_00840 PF01757 Acyltransferase family DLE03_00850 PF00535 Glycosyl transferase family 2 DLE03_00865 PF16363 GDP-mannose 4,6 dehydratase DLE03_00870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DLE03_00875 PF00483 Nucleotidyl transferase DLE03_00880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DLE03_00885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DLE03_00885 PF02779 Transketolase, pyrimidine binding domain DLE03_00885 PF02780 Transketolase, C-terminal domain DLE03_00890 PF00456 Transketolase, thiamine diphosphate binding domain DLE03_00900 PF09115 DNA polymerase III, delta subunit, C terminal DLE03_00905 PF02223 Thymidylate kinase DLE03_00910 PF01370 NAD dependent epimerase/dehydratase family DLE03_00915 PF13368 Topoisomerase C-terminal repeat DLE03_00915 PF01751 Toprim domain DLE03_00915 PF01131 DNA topoisomerase DLE03_00920 PF03030 Inorganic H+ pyrophosphatase DLE03_00925 PF00232 Glycosyl hydrolase family 1 DLE03_00930 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_00935 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_00940 PF01547 Bacterial extracellular solute-binding protein DLE03_00945 PF00356 Bacterial regulatory proteins, lacI family DLE03_00950 PF09335 SNARE associated Golgi protein DLE03_00955 PF00156 Phosphoribosyl transferase domain DLE03_00970 PF13411 MerR HTH family regulatory protein DLE03_00975 PF00226 DnaJ domain DLE03_00975 PF01556 DnaJ C terminal domain DLE03_00975 PF00684 DnaJ central domain DLE03_00980 PF01025 GrpE DLE03_00985 PF00012 Hsp70 protein DLE03_00990 PF05258 Dna[CI] antecedent, DciA DLE03_00995 PF02463 RecF/RecN/SMC N terminal domain DLE03_01000 PF00712 DNA polymerase III beta subunit, N-terminal domain DLE03_01000 PF02767 DNA polymerase III beta subunit, central domain DLE03_01000 PF02768 DNA polymerase III beta subunit, C-terminal domain DLE03_01005 PF08299 Bacterial dnaA protein helix-turn-helix DLE03_01005 PF00308 Bacterial dnaA protein DLE03_01010 PF00468 Ribosomal protein L34 DLE03_01015 PF00825 Ribonuclease P DLE03_01020 PF01809 Putative membrane protein insertion efficiency factor DLE03_01025 PF02096 60Kd inner membrane protein DLE03_01035 PF02527 rRNA small subunit methyltransferase G DLE03_01040 PF13614 AAA domain DLE03_01045 PF02195 ParB-like nuclease domain DLE03_01045 PF17762 HTH domain found in ParB protein DLE03_01050 PF00155 Aminotransferase class I and II DLE03_01055 PF01520 N-acetylmuramoyl-L-alanine amidase DLE03_01060 PF00085 Thioredoxin DLE03_01065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLE03_01070 PF03023 Lipid II flippase MurJ DLE03_01080 PF00293 NUDIX domain DLE03_01085 PF13735 tRNA nucleotidyltransferase domain 2 putative DLE03_01085 PF12627 Probable RNA and SrmB- binding site of polymerase A DLE03_01085 PF01743 Poly A polymerase head domain DLE03_01090 PF07690 Major Facilitator Superfamily DLE03_01095 PF17249 Family of unknown function (DUF5318) DLE03_01100 PF00912 Transglycosylase DLE03_01100 PF00905 Penicillin binding protein transpeptidase domain DLE03_01110 PF01250 Ribosomal protein S6 DLE03_01115 PF00436 Single-strand binding protein family DLE03_01120 PF01084 Ribosomal protein S18 DLE03_01125 PF03948 Ribosomal protein L9, C-terminal domain DLE03_01125 PF01281 Ribosomal protein L9, N-terminal domain DLE03_01130 PF01544 CorA-like Mg2+ transporter protein DLE03_01135 PF03796 DnaB-like helicase C terminal domain DLE03_01135 PF00772 DnaB-like helicase N terminal domain DLE03_01145 PF02770 Acyl-CoA dehydrogenase, middle domain DLE03_01145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DLE03_01145 PF12806 Acetyl-CoA dehydrogenase C-terminal like DLE03_01145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DLE03_01150 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DLE03_01155 PF04011 LemA family DLE03_01160 PF01435 Peptidase family M48 DLE03_01165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLE03_01165 PF00672 HAMP domain DLE03_01165 PF00512 His Kinase A (phospho-acceptor) domain DLE03_01170 PF00486 Transcriptional regulatory protein, C terminal DLE03_01170 PF00072 Response regulator receiver domain DLE03_01175 PF01751 Toprim domain DLE03_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLE03_01175 PF00204 DNA gyrase B DLE03_01175 PF00986 DNA gyrase B subunit, carboxyl terminus DLE03_01180 PF00521 DNA gyrase/topoisomerase IV, subunit A DLE03_01180 PF03989 DNA gyrase C-terminal domain, beta-propeller DLE03_01200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DLE03_01205 PF01694 Rhomboid family DLE03_01210 PF02754 Cysteine-rich domain DLE03_01210 PF13183 4Fe-4S dicluster domain DLE03_01210 PF02665 Nitrate reductase gamma subunit DLE03_01215 PF01070 FMN-dependent dehydrogenase DLE03_01220 PF06781 Cell division protein CrgA DLE03_01225 PF00117 Glutamine amidotransferase class-I DLE03_01230 PF03793 PASTA domain DLE03_01230 PF00069 Protein kinase domain DLE03_01240 PF03009 Glycerophosphoryl diester phosphodiesterase family DLE03_01245 PF01842 ACT domain DLE03_01245 PF00800 Prephenate dehydratase DLE03_01250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLE03_01250 PF02403 Seryl-tRNA synthetase N-terminal domain DLE03_01270 PF00890 FAD binding domain DLE03_01270 PF02910 Fumarate reductase flavoprotein C-term DLE03_01275 PF13183 4Fe-4S dicluster domain DLE03_01275 PF13085 2Fe-2S iron-sulfur cluster binding domain DLE03_01280 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DLE03_01285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DLE03_01290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DLE03_01295 PF05195 Aminopeptidase P, N-terminal domain DLE03_01295 PF00557 Metallopeptidase family M24 DLE03_01300 PF00171 Aldehyde dehydrogenase family DLE03_01300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DLE03_01300 PF01619 Proline dehydrogenase DLE03_01300 PF14850 DNA-binding domain of Proline dehydrogenase DLE03_01310 PF02734 DAK2 domain DLE03_01315 PF02733 Dak1 domain DLE03_01325 PF00005 ABC transporter DLE03_01330 PF02653 Branched-chain amino acid transport system / permease component DLE03_01335 PF02653 Branched-chain amino acid transport system / permease component DLE03_01340 PF05343 M42 glutamyl aminopeptidase DLE03_01345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DLE03_01345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DLE03_01350 PF08240 Alcohol dehydrogenase GroES-like domain DLE03_01350 PF00107 Zinc-binding dehydrogenase DLE03_01360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DLE03_01360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DLE03_01365 PF03437 BtpA family DLE03_01370 PF00455 DeoR C terminal sensor domain DLE03_01370 PF08220 DeoR-like helix-turn-helix domain DLE03_01385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLE03_01390 PF02872 5'-nucleotidase, C-terminal domain DLE03_01390 PF00149 Calcineurin-like phosphoesterase DLE03_01390 PF00565 Staphylococcal nuclease homologue DLE03_01390 PF00746 LPXTG cell wall anchor motif DLE03_01395 PF00478 IMP dehydrogenase / GMP reductase domain DLE03_01395 PF00571 CBS domain DLE03_01410 PF00004 ATPase family associated with various cellular activities (AAA) DLE03_01410 PF06480 FtsH Extracellular DLE03_01410 PF17862 AAA+ lid domain DLE03_01410 PF01434 Peptidase family M41 DLE03_01435 PF00202 Aminotransferase class-III DLE03_01440 PF03033 Glycosyltransferase family 28 N-terminal domain DLE03_01440 PF04101 Glycosyltransferase family 28 C-terminal domain DLE03_01445 PF09335 SNARE associated Golgi protein DLE03_01455 PF03301 Tryptophan 2,3-dioxygenase DLE03_01460 PF00266 Aminotransferase class-V DLE03_01465 PF00005 ABC transporter DLE03_01465 PF12848 ABC transporter DLE03_01465 PF16326 ABC transporter C-terminal domain DLE03_01475 PF09335 SNARE associated Golgi protein DLE03_01480 PF03949 Malic enzyme, NAD binding domain DLE03_01480 PF00390 Malic enzyme, N-terminal domain DLE03_01495 PF14437 MafB19-like deaminase DLE03_01500 PF13520 Amino acid permease DLE03_01505 PF00171 Aldehyde dehydrogenase family DLE03_01540 PF12169 DNA polymerase III subunits gamma and tau domain III DLE03_01545 PF13662 Toprim domain DLE03_01545 PF02132 RecR protein DLE03_01550 PF13840 ACT domain DLE03_01550 PF01842 ACT domain DLE03_01550 PF00696 Amino acid kinase family DLE03_01555 PF02774 Semialdehyde dehydrogenase, dimerisation domain DLE03_01555 PF01118 Semialdehyde dehydrogenase, NAD binding domain DLE03_01560 PF01370 NAD dependent epimerase/dehydratase family DLE03_01565 PF16363 GDP-mannose 4,6 dehydratase DLE03_01575 PF09424 Yqey-like protein DLE03_01585 PF13545 Crp-like helix-turn-helix domain DLE03_01585 PF00027 Cyclic nucleotide-binding domain DLE03_01590 PF00730 HhH-GPD superfamily base excision DNA repair protein DLE03_01590 PF10576 Iron-sulfur binding domain of endonuclease III DLE03_01590 PF00633 Helix-hairpin-helix motif DLE03_01595 PF08534 Redoxin DLE03_01605 PF13193 AMP-binding enzyme C-terminal domain DLE03_01605 PF16177 Acetyl-coenzyme A synthetase N-terminus DLE03_01605 PF00501 AMP-binding enzyme DLE03_01610 PF01116 Fructose-bisphosphate aldolase class-II DLE03_01615 PF00709 Adenylosuccinate synthetase DLE03_01620 PF02844 Phosphoribosylglycinamide synthetase, N domain DLE03_01620 PF02843 Phosphoribosylglycinamide synthetase, C domain DLE03_01620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DLE03_01625 PF10397 Adenylosuccinate lyase C-terminus DLE03_01625 PF00206 Lyase DLE03_01630 PF01259 SAICAR synthetase DLE03_01635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DLE03_01645 PF02769 AIR synthase related protein, C-terminal domain DLE03_01645 PF00586 AIR synthase related protein, N-terminal domain DLE03_01645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DLE03_01655 PF00156 Phosphoribosyl transferase domain DLE03_01660 PF00586 AIR synthase related protein, N-terminal domain DLE03_01660 PF02769 AIR synthase related protein, C-terminal domain DLE03_01685 PF00953 Glycosyl transferase family 4 DLE03_01695 PF02594 Uncharacterised ACR, YggU family COG1872 DLE03_01720 PF13439 Glycosyltransferase Family 4 DLE03_01720 PF00534 Glycosyl transferases group 1 DLE03_01725 PF03481 Putative GTP-binding controlling metal-binding DLE03_01725 PF01300 Telomere recombination DLE03_01740 PF03824 High-affinity nickel-transport protein DLE03_01765 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DLE03_01775 PF01040 UbiA prenyltransferase family DLE03_01780 PF01053 Cys/Met metabolism PLP-dependent enzyme DLE03_01785 PF00005 ABC transporter DLE03_01800 PF01171 PP-loop family DLE03_01800 PF09179 TilS substrate binding domain DLE03_01810 PF00004 ATPase family associated with various cellular activities (AAA) DLE03_01810 PF17862 AAA+ lid domain DLE03_01810 PF01434 Peptidase family M41 DLE03_01810 PF06480 FtsH Extracellular DLE03_01815 PF01227 GTP cyclohydrolase I DLE03_01820 PF00809 Pterin binding enzyme DLE03_01830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DLE03_01835 PF02569 Pantoate-beta-alanine ligase DLE03_01840 PF02910 Fumarate reductase flavoprotein C-term DLE03_01840 PF00890 FAD binding domain DLE03_01845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DLE03_01845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DLE03_01850 PF03309 Type III pantothenate kinase DLE03_01855 PF00152 tRNA synthetases class II (D, K and N) DLE03_01855 PF01336 OB-fold nucleic acid binding domain DLE03_01860 PF00583 Acetyltransferase (GNAT) family DLE03_01865 PF02861 Clp amino terminal domain, pathogenicity island component DLE03_01865 PF07724 AAA domain (Cdc48 subfamily) DLE03_01865 PF00004 ATPase family associated with various cellular activities (AAA) DLE03_01865 PF10431 C-terminal, D2-small domain, of ClpB protein DLE03_01865 PF17871 AAA lid domain DLE03_01870 PF10576 Iron-sulfur binding domain of endonuclease III DLE03_01870 PF00633 Helix-hairpin-helix motif DLE03_01870 PF00730 HhH-GPD superfamily base excision DNA repair protein DLE03_01875 PF06745 KaiC DLE03_01875 PF18073 Rubredoxin metal binding domain DLE03_01885 PF03807 NADP oxidoreductase coenzyme F420-dependent DLE03_01885 PF14748 Pyrroline-5-carboxylate reductase dimerisation DLE03_01905 PF00271 Helicase conserved C-terminal domain DLE03_01905 PF04851 Type III restriction enzyme, res subunit DLE03_01925 PF00300 Histidine phosphatase superfamily (branch 1) DLE03_01930 PF08534 Redoxin DLE03_01935 PF02683 Cytochrome C biogenesis protein transmembrane region DLE03_01940 PF05140 ResB-like family DLE03_01945 PF01578 Cytochrome C assembly protein DLE03_01960 PF01040 UbiA prenyltransferase family DLE03_01965 PF13193 AMP-binding enzyme C-terminal domain DLE03_01965 PF00501 AMP-binding enzyme DLE03_01970 PF00378 Enoyl-CoA hydratase/isomerase DLE03_01975 PF13378 Enolase C-terminal domain-like DLE03_01975 PF18374 Enolase N-terminal domain-like DLE03_01980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DLE03_01980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLE03_01985 PF00425 chorismate binding enzyme DLE03_01990 PF02632 BioY family DLE03_01995 PF01209 ubiE/COQ5 methyltransferase family DLE03_02000 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DLE03_02005 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DLE03_02010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DLE03_02015 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DLE03_02025 PF10531 SLBB domain DLE03_02025 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DLE03_02025 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DLE03_02030 PF01568 Molydopterin dinucleotide binding domain DLE03_02030 PF00384 Molybdopterin oxidoreductase DLE03_02030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DLE03_02035 PF00146 NADH dehydrogenase DLE03_02040 PF12838 4Fe-4S dicluster domain DLE03_02045 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DLE03_02050 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DLE03_02055 PF00361 Proton-conducting membrane transporter DLE03_02055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DLE03_02060 PF00361 Proton-conducting membrane transporter DLE03_02065 PF00361 Proton-conducting membrane transporter DLE03_02070 PF00348 Polyprenyl synthetase DLE03_02075 PF00892 EamA-like transporter family DLE03_02080 PF04461 Protein of unknown function (DUF520) DLE03_02090 PF02653 Branched-chain amino acid transport system / permease component DLE03_02095 PF00005 ABC transporter DLE03_02110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLE03_02125 PF00248 Aldo/keto reductase family DLE03_02130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DLE03_02130 PF13378 Enolase C-terminal domain-like DLE03_02135 PF00106 short chain dehydrogenase DLE03_02140 PF01641 SelR domain DLE03_02150 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_02155 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_02160 PF13380 CoA binding domain DLE03_02170 PF00107 Zinc-binding dehydrogenase DLE03_02170 PF08240 Alcohol dehydrogenase GroES-like domain DLE03_02185 PF00471 Ribosomal protein L33 DLE03_02190 PF13452 N-terminal half of MaoC dehydratase DLE03_02200 PF01406 tRNA synthetases class I (C) catalytic domain DLE03_02200 PF09190 DALR domain DLE03_02205 PF01565 FAD binding domain DLE03_02205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DLE03_02210 PF00155 Aminotransferase class I and II DLE03_02220 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DLE03_02225 PF02357 Transcription termination factor nusG DLE03_02230 PF00298 Ribosomal protein L11, RNA binding domain DLE03_02230 PF03946 Ribosomal protein L11, N-terminal domain DLE03_02235 PF00687 Ribosomal protein L1p/L10e family DLE03_02240 PF00466 Ribosomal protein L10 DLE03_02245 PF00542 Ribosomal protein L7/L12 C-terminal domain DLE03_02245 PF16320 Ribosomal protein L7/L12 dimerisation domain DLE03_02250 PF04563 RNA polymerase beta subunit DLE03_02250 PF04561 RNA polymerase Rpb2, domain 2 DLE03_02250 PF04565 RNA polymerase Rpb2, domain 3 DLE03_02250 PF10385 RNA polymerase beta subunit external 1 domain DLE03_02250 PF00562 RNA polymerase Rpb2, domain 6 DLE03_02250 PF04560 RNA polymerase Rpb2, domain 7 DLE03_02255 PF05000 RNA polymerase Rpb1, domain 4 DLE03_02255 PF00623 RNA polymerase Rpb1, domain 2 DLE03_02255 PF04998 RNA polymerase Rpb1, domain 5 DLE03_02255 PF04997 RNA polymerase Rpb1, domain 1 DLE03_02255 PF04983 RNA polymerase Rpb1, domain 3 DLE03_02265 PF00164 Ribosomal protein S12/S23 DLE03_02270 PF00177 Ribosomal protein S7p/S5e DLE03_02275 PF03144 Elongation factor Tu domain 2 DLE03_02275 PF00009 Elongation factor Tu GTP binding domain DLE03_02275 PF03764 Elongation factor G, domain IV DLE03_02275 PF00679 Elongation factor G C-terminus DLE03_02275 PF14492 Elongation Factor G, domain II DLE03_02280 PF03144 Elongation factor Tu domain 2 DLE03_02280 PF03143 Elongation factor Tu C-terminal domain DLE03_02280 PF00009 Elongation factor Tu GTP binding domain DLE03_02285 PF00338 Ribosomal protein S10p/S20e DLE03_02290 PF00297 Ribosomal protein L3 DLE03_02295 PF00573 Ribosomal protein L4/L1 family DLE03_02300 PF00276 Ribosomal protein L23 DLE03_02305 PF00181 Ribosomal Proteins L2, RNA binding domain DLE03_02305 PF03947 Ribosomal Proteins L2, C-terminal domain DLE03_02310 PF00203 Ribosomal protein S19 DLE03_02315 PF00237 Ribosomal protein L22p/L17e DLE03_02320 PF00189 Ribosomal protein S3, C-terminal domain DLE03_02320 PF07650 KH domain DLE03_02325 PF00252 Ribosomal protein L16p/L10e DLE03_02330 PF00831 Ribosomal L29 protein DLE03_02335 PF00366 Ribosomal protein S17 DLE03_02340 PF00238 Ribosomal protein L14p/L23e DLE03_02345 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DLE03_02345 PF00467 KOW motif DLE03_02350 PF00673 ribosomal L5P family C-terminus DLE03_02350 PF00281 Ribosomal protein L5 DLE03_02355 PF00253 Ribosomal protein S14p/S29e DLE03_02360 PF00410 Ribosomal protein S8 DLE03_02365 PF00347 Ribosomal protein L6 DLE03_02370 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DLE03_02375 PF03719 Ribosomal protein S5, C-terminal domain DLE03_02375 PF00333 Ribosomal protein S5, N-terminal domain DLE03_02380 PF00327 Ribosomal protein L30p/L7e DLE03_02385 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DLE03_02390 PF00344 SecY translocase DLE03_02395 PF05191 Adenylate kinase, active site lid DLE03_02400 PF00557 Metallopeptidase family M24 DLE03_02415 PF01970 Tripartite tricarboxylate transporter TctA family DLE03_02425 PF01176 Translation initiation factor 1A / IF-1 DLE03_02430 PF00444 Ribosomal protein L36 DLE03_02435 PF00416 Ribosomal protein S13/S18 DLE03_02440 PF00411 Ribosomal protein S11 DLE03_02445 PF00163 Ribosomal protein S4/S9 N-terminal domain DLE03_02445 PF01479 S4 domain DLE03_02450 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DLE03_02450 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DLE03_02450 PF01000 RNA polymerase Rpb3/RpoA insert domain DLE03_02455 PF01196 Ribosomal protein L17 DLE03_02460 PF01416 tRNA pseudouridine synthase DLE03_02465 PF00005 ABC transporter DLE03_02465 PF12848 ABC transporter DLE03_02470 PF00572 Ribosomal protein L13 DLE03_02475 PF00380 Ribosomal protein S9/S16 DLE03_02480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DLE03_02480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DLE03_02480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DLE03_02480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DLE03_02485 PF01380 SIS domain DLE03_02495 PF01648 4'-phosphopantetheinyl transferase superfamily DLE03_02500 PF01168 Alanine racemase, N-terminal domain DLE03_02500 PF00842 Alanine racemase, C-terminal domain DLE03_02505 PF00005 ABC transporter DLE03_02505 PF12399 Branched-chain amino acid ATP-binding cassette transporter DLE03_02510 PF00005 ABC transporter DLE03_02515 PF02653 Branched-chain amino acid transport system / permease component DLE03_02520 PF02653 Branched-chain amino acid transport system / permease component DLE03_02535 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DLE03_02540 PF00814 Glycoprotease family DLE03_02540 PF00583 Acetyltransferase (GNAT) family DLE03_02545 PF00583 Acetyltransferase (GNAT) family DLE03_02545 PF00814 Glycoprotease family DLE03_02550 PF00814 Glycoprotease family DLE03_02555 PF00166 Chaperonin 10 Kd subunit DLE03_02560 PF00118 TCP-1/cpn60 chaperonin family DLE03_02565 PF02467 Transcription factor WhiB DLE03_02575 PF00478 IMP dehydrogenase / GMP reductase domain DLE03_02575 PF00571 CBS domain DLE03_02580 PF00478 IMP dehydrogenase / GMP reductase domain DLE03_02585 PF00958 GMP synthase C terminal domain DLE03_02585 PF00117 Glutamine amidotransferase class-I DLE03_02585 PF02540 NAD synthase DLE03_02590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DLE03_02595 PF02585 GlcNAc-PI de-N-acetylase DLE03_02600 PF00580 UvrD/REP helicase N-terminal domain DLE03_02600 PF13361 UvrD-like helicase C-terminal domain DLE03_02605 PF08442 ATP-grasp domain DLE03_02605 PF00549 CoA-ligase DLE03_02610 PF02629 CoA binding domain DLE03_02610 PF00549 CoA-ligase DLE03_02620 PF00551 Formyl transferase DLE03_02625 PF02142 MGS-like domain DLE03_02625 PF01808 AICARFT/IMPCHase bienzyme DLE03_02630 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DLE03_02630 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DLE03_02640 PF00056 lactate/malate dehydrogenase, NAD binding domain DLE03_02640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DLE03_02645 PF00180 Isocitrate/isopropylmalate dehydrogenase DLE03_02655 PF17912 MalK OB fold domain DLE03_02655 PF00005 ABC transporter DLE03_02660 PF01595 Cyclin M transmembrane N-terminal domain DLE03_02660 PF03471 Transporter associated domain DLE03_02660 PF00571 CBS domain DLE03_02665 PF00579 tRNA synthetases class I (W and Y) DLE03_02670 PF02608 ABC transporter substrate-binding protein PnrA-like DLE03_02675 PF02608 ABC transporter substrate-binding protein PnrA-like DLE03_02695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DLE03_02700 PF02885 Glycosyl transferase family, helical bundle domain DLE03_02700 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DLE03_02700 PF00591 Glycosyl transferase family, a/b domain DLE03_02705 PF00962 Adenosine/AMP deaminase DLE03_02710 PF00171 Aldehyde dehydrogenase family DLE03_02715 PF00171 Aldehyde dehydrogenase family DLE03_02720 PF01791 DeoC/LacD family aldolase DLE03_02725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DLE03_02725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DLE03_02725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DLE03_02725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DLE03_02730 PF01048 Phosphorylase superfamily DLE03_02735 PF02785 Biotin carboxylase C-terminal domain DLE03_02735 PF00289 Biotin carboxylase, N-terminal domain DLE03_02735 PF00364 Biotin-requiring enzyme DLE03_02735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DLE03_02740 PF02545 Maf-like protein DLE03_02750 PF01039 Carboxyl transferase domain DLE03_02755 PF02237 Biotin protein ligase C terminal domain DLE03_02755 PF03309 Type III pantothenate kinase DLE03_02755 PF03099 Biotin/lipoate A/B protein ligase family DLE03_02760 PF02222 ATP-grasp domain DLE03_02760 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DLE03_02765 PF00731 AIR carboxylase DLE03_02770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DLE03_02770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DLE03_02770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DLE03_02775 PF03816 Cell envelope-related transcriptional attenuator domain DLE03_02790 PF00005 ABC transporter DLE03_02790 PF14524 Wzt C-terminal domain DLE03_02800 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DLE03_02800 PF14602 Hexapeptide repeat of succinyl-transferase DLE03_02805 PF03641 Possible lysine decarboxylase DLE03_02825 PF02789 Cytosol aminopeptidase family, N-terminal domain DLE03_02825 PF00883 Cytosol aminopeptidase family, catalytic domain DLE03_02830 PF01596 O-methyltransferase DLE03_02835 PF13180 PDZ domain DLE03_02840 PF02416 mttA/Hcf106 family DLE03_02845 PF01883 Iron-sulfur cluster assembly protein DLE03_02845 PF10609 NUBPL iron-transfer P-loop NTPase DLE03_02855 PF03448 MgtE intracellular N domain DLE03_02855 PF01769 Divalent cation transporter DLE03_02855 PF00571 CBS domain DLE03_02870 PF01914 MarC family integral membrane protein DLE03_02875 PF00271 Helicase conserved C-terminal domain DLE03_02875 PF00270 DEAD/DEAH box helicase DLE03_02890 PF00581 Rhodanese-like domain DLE03_02890 PF00899 ThiF family DLE03_02895 PF02585 GlcNAc-PI de-N-acetylase DLE03_02905 PF01406 tRNA synthetases class I (C) catalytic domain DLE03_02905 PF09190 DALR domain DLE03_02910 PF00037 4Fe-4S binding domain DLE03_02915 PF00155 Aminotransferase class I and II DLE03_02920 PF00483 Nucleotidyl transferase DLE03_02925 PF02467 Transcription factor WhiB DLE03_02930 PF00534 Glycosyl transferases group 1 DLE03_02930 PF00535 Glycosyl transferase family 2 DLE03_02945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DLE03_02945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DLE03_02945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DLE03_02945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DLE03_02950 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DLE03_02950 PF05221 S-adenosyl-L-homocysteine hydrolase DLE03_02955 PF00072 Response regulator receiver domain DLE03_02955 PF00486 Transcriptional regulatory protein, C terminal DLE03_02960 PF00672 HAMP domain DLE03_02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLE03_02960 PF00512 His Kinase A (phospho-acceptor) domain DLE03_02965 PF00156 Phosphoribosyl transferase domain DLE03_02970 PF02810 SEC-C motif DLE03_02970 PF01043 SecA preprotein cross-linking domain DLE03_02970 PF07517 SecA DEAD-like domain DLE03_02970 PF07516 SecA Wing and Scaffold domain DLE03_02985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DLE03_02995 PF12282 Signal transduction histidine kinase DLE03_02995 PF07568 Histidine kinase DLE03_02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLE03_03000 PF02467 Transcription factor WhiB DLE03_03010 PF01625 Peptide methionine sulfoxide reductase DLE03_03020 PF00155 Aminotransferase class I and II DLE03_03025 PF01053 Cys/Met metabolism PLP-dependent enzyme DLE03_03045 PF00072 Response regulator receiver domain DLE03_03045 PF00486 Transcriptional regulatory protein, C terminal DLE03_03050 PF11808 Phosphate regulon sensor protein PhoR DLE03_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLE03_03050 PF00512 His Kinase A (phospho-acceptor) domain DLE03_03050 PF00989 PAS fold DLE03_03060 PF00764 Arginosuccinate synthase DLE03_03065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLE03_03065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DLE03_03070 PF00128 Alpha amylase, catalytic domain DLE03_03075 PF03458 UPF0126 domain DLE03_03095 PF00464 Serine hydroxymethyltransferase DLE03_03100 PF00543 Nitrogen regulatory protein P-II DLE03_03105 PF00909 Ammonium Transporter Family DLE03_03110 PF00719 Inorganic pyrophosphatase DLE03_03120 PF00929 Exonuclease DLE03_03125 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_03130 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_03135 PF00005 ABC transporter DLE03_03140 PF12849 PBP superfamily domain DLE03_03150 PF12848 ABC transporter DLE03_03150 PF00005 ABC transporter DLE03_03160 PF07690 Major Facilitator Superfamily DLE03_03165 PF01152 Bacterial-like globin DLE03_03170 PF00924 Mechanosensitive ion channel DLE03_03185 PF01433 Peptidase family M1 domain DLE03_03185 PF11838 ERAP1-like C-terminal domain DLE03_03190 PF02390 Putative methyltransferase DLE03_03195 PF02502 Ribose/Galactose Isomerase DLE03_03220 PF05698 Bacterial trigger factor protein (TF) C-terminus DLE03_03220 PF05697 Bacterial trigger factor protein (TF) DLE03_03220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLE03_03225 PF00574 Clp protease DLE03_03230 PF00574 Clp protease DLE03_03240 PF10431 C-terminal, D2-small domain, of ClpB protein DLE03_03240 PF06689 ClpX C4-type zinc finger DLE03_03240 PF07724 AAA domain (Cdc48 subfamily) DLE03_03245 PF08264 Anticodon-binding domain of tRNA DLE03_03245 PF00133 tRNA synthetases class I (I, L, M and V) DLE03_03245 PF10458 Valyl tRNA synthetase tRNA binding arm DLE03_03250 PF02875 Mur ligase family, glutamate ligase domain DLE03_03250 PF08245 Mur ligase middle domain DLE03_03260 PF00334 Nucleoside diphosphate kinase DLE03_03280 PF00905 Penicillin binding protein transpeptidase domain DLE03_03280 PF03717 Penicillin-binding Protein dimerisation domain DLE03_03285 PF01098 Cell cycle protein DLE03_03290 PF10150 Ribonuclease E/G family DLE03_03295 PF00829 Ribosomal prokaryotic L21 protein DLE03_03300 PF01016 Ribosomal L27 protein DLE03_03305 PF09269 Domain of unknown function (DUF1967) DLE03_03305 PF01018 GTP1/OBG DLE03_03305 PF01926 50S ribosome-binding GTPase DLE03_03310 PF00696 Amino acid kinase family DLE03_03310 PF01472 PUA domain DLE03_03315 PF00171 Aldehyde dehydrogenase family DLE03_03320 PF02686 Glu-tRNAGln amidotransferase C subunit DLE03_03325 PF01425 Amidase DLE03_03330 PF02934 GatB/GatE catalytic domain DLE03_03330 PF02637 GatB domain DLE03_03335 PF07690 Major Facilitator Superfamily DLE03_03340 PF00920 Dehydratase family DLE03_03345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLE03_03345 PF00205 Thiamine pyrophosphate enzyme, central domain DLE03_03345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DLE03_03350 PF10369 Small subunit of acetolactate synthase DLE03_03355 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DLE03_03355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DLE03_03360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DLE03_03360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLE03_03360 PF01842 ACT domain DLE03_03365 PF00180 Isocitrate/isopropylmalate dehydrogenase DLE03_03370 PF01063 Amino-transferase class IV DLE03_03375 PF08502 LeuA allosteric (dimerisation) domain DLE03_03375 PF00682 HMGL-like DLE03_03390 PF02899 Phage integrase, N-terminal SAM-like domain DLE03_03390 PF00589 Phage integrase family DLE03_03395 PF00318 Ribosomal protein S2 DLE03_03400 PF00889 Elongation factor TS DLE03_03405 PF00696 Amino acid kinase family DLE03_03410 PF01765 Ribosome recycling factor DLE03_03420 PF04055 Radical SAM superfamily DLE03_03430 PF00171 Aldehyde dehydrogenase family DLE03_03440 PF00005 ABC transporter DLE03_03440 PF08402 TOBE domain DLE03_03445 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_03450 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_03455 PF13288 DXP reductoisomerase C-terminal domain DLE03_03455 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DLE03_03455 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DLE03_03460 PF17820 PDZ domain DLE03_03460 PF02163 Peptidase family M50 DLE03_03465 PF04551 GcpE protein DLE03_03470 PF04073 Aminoacyl-tRNA editing domain DLE03_03470 PF03129 Anticodon binding domain DLE03_03470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLE03_03475 PF01925 Sulfite exporter TauE/SafE DLE03_03480 PF17384 RimP C-terminal SH3 domain DLE03_03480 PF02576 RimP N-terminal domain DLE03_03485 PF13184 NusA-like KH domain DLE03_03485 PF08529 NusA N-terminal domain DLE03_03490 PF00009 Elongation factor Tu GTP binding domain DLE03_03490 PF04760 Translation initiation factor IF-2, N-terminal region DLE03_03490 PF11987 Translation-initiation factor 2 DLE03_03490 PF00009 Elongation factor Tu GTP binding domain DLE03_03490 PF11987 Translation-initiation factor 2 DLE03_03490 PF04760 Translation initiation factor IF-2, N-terminal region DLE03_03495 PF02033 Ribosome-binding factor A DLE03_03500 PF01509 TruB family pseudouridylate synthase (N terminal domain) DLE03_03500 PF16198 tRNA pseudouridylate synthase B C-terminal domain DLE03_03500 PF09142 tRNA Pseudouridine synthase II, C terminal DLE03_03505 PF01687 Riboflavin kinase DLE03_03505 PF06574 FAD synthetase DLE03_03510 PF00312 Ribosomal protein S15 DLE03_03515 PF00575 S1 RNA binding domain DLE03_03515 PF03725 3' exoribonuclease family, domain 2 DLE03_03515 PF01138 3' exoribonuclease family, domain 1 DLE03_03515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DLE03_03515 PF00013 KH domain DLE03_03520 PF00675 Insulinase (Peptidase family M16) DLE03_03520 PF05193 Peptidase M16 inactive domain DLE03_03525 PF05173 Dihydrodipicolinate reductase, C-terminus DLE03_03525 PF01113 Dihydrodipicolinate reductase, N-terminus DLE03_03530 PF00462 Glutaredoxin DLE03_03545 PF02511 Thymidylate synthase complementing protein DLE03_03550 PF00701 Dihydrodipicolinate synthetase family DLE03_03555 PF12706 Beta-lactamase superfamily domain DLE03_03555 PF17770 Ribonuclease J C-terminal domain DLE03_03555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DLE03_03560 PF09397 Ftsk gamma domain DLE03_03560 PF01580 FtsK/SpoIIIE family DLE03_03560 PF17854 FtsK alpha domain DLE03_03570 PF04055 Radical SAM superfamily DLE03_03570 PF18693 TRAM domain DLE03_03570 PF00919 Uncharacterized protein family UPF0004 DLE03_03575 PF01066 CDP-alcohol phosphatidyltransferase DLE03_03580 PF00994 Probable molybdopterin binding domain DLE03_03580 PF18146 Damage-inducible protein CinA KH domain DLE03_03580 PF02464 Competence-damaged protein DLE03_03600 PF00561 alpha/beta hydrolase fold DLE03_03610 PF00154 recA bacterial DNA recombination protein DLE03_03615 PF02631 RecX family DLE03_03625 PF00330 Aconitase family (aconitate hydratase) DLE03_03630 PF00694 Aconitase C-terminal domain DLE03_03635 PF00216 Bacterial DNA-binding protein DLE03_03645 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DLE03_03645 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DLE03_03650 PF07478 D-ala D-ala ligase C-terminus DLE03_03650 PF01820 D-ala D-ala ligase N-terminus DLE03_03660 PF02769 AIR synthase related protein, C-terminal domain DLE03_03660 PF00586 AIR synthase related protein, N-terminal domain DLE03_03665 PF00830 Ribosomal L28 family DLE03_03670 PF17191 RecG wedge domain DLE03_03670 PF00271 Helicase conserved C-terminal domain DLE03_03670 PF00270 DEAD/DEAH box helicase DLE03_03680 PF01467 Cytidylyltransferase-like DLE03_03690 PF02620 Large ribosomal RNA subunit accumulation protein YceD DLE03_03695 PF01783 Ribosomal L32p protein family DLE03_03700 PF14622 Ribonuclease-III-like DLE03_03700 PF00035 Double-stranded RNA binding motif DLE03_03705 PF06470 SMC proteins Flexible Hinge Domain DLE03_03705 PF02463 RecF/RecN/SMC N terminal domain DLE03_03710 PF00448 SRP54-type protein, GTPase domain DLE03_03710 PF02881 SRP54-type protein, helical bundle domain DLE03_03715 PF00909 Ammonium Transporter Family DLE03_03720 PF00543 Nitrogen regulatory protein P-II DLE03_03725 PF01909 Nucleotidyltransferase domain DLE03_03725 PF01966 HD domain DLE03_03725 PF08335 GlnD PII-uridylyltransferase DLE03_03730 PF00448 SRP54-type protein, GTPase domain DLE03_03730 PF02881 SRP54-type protein, helical bundle domain DLE03_03730 PF02978 Signal peptide binding domain DLE03_03735 PF00886 Ribosomal protein S16 DLE03_03745 PF01782 RimM N-terminal domain DLE03_03745 PF05239 PRC-barrel domain DLE03_03750 PF01746 tRNA (Guanine-1)-methyltransferase DLE03_03755 PF03405 Fatty acid desaturase DLE03_03760 PF00919 Uncharacterized protein family UPF0004 DLE03_03760 PF04055 Radical SAM superfamily DLE03_03770 PF01678 Diaminopimelate epimerase DLE03_03775 PF16360 GTP-binding GTPase Middle Region DLE03_03775 PF13167 GTP-binding GTPase N-terminal DLE03_03775 PF01926 50S ribosome-binding GTPase DLE03_03795 PF00692 dUTPase DLE03_03805 PF02080 TrkA-C domain DLE03_03805 PF02254 TrkA-N domain DLE03_03810 PF02254 TrkA-N domain DLE03_03810 PF02080 TrkA-C domain DLE03_03815 PF05958 tRNA (Uracil-5-)-methyltransferase DLE03_03815 PF01938 TRAM domain DLE03_03820 PF00330 Aconitase family (aconitate hydratase) DLE03_03820 PF00694 Aconitase C-terminal domain DLE03_03825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DLE03_03825 PF02779 Transketolase, pyrimidine binding domain DLE03_03825 PF02780 Transketolase, C-terminal domain DLE03_03830 PF00378 Enoyl-CoA hydratase/isomerase DLE03_03830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DLE03_03830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DLE03_03840 PF03239 Iron permease FTR1 family DLE03_03865 PF00877 NlpC/P60 family DLE03_03870 PF00534 Glycosyl transferases group 1 DLE03_03870 PF13439 Glycosyltransferase Family 4 DLE03_03875 PF00072 Response regulator receiver domain DLE03_03875 PF00196 Bacterial regulatory proteins, luxR family DLE03_03885 PF00501 AMP-binding enzyme DLE03_03895 PF00480 ROK family DLE03_03915 PF01810 LysE type translocator DLE03_03925 PF01658 Myo-inositol-1-phosphate synthase DLE03_03930 PF00378 Enoyl-CoA hydratase/isomerase DLE03_03935 PF00106 short chain dehydrogenase DLE03_03940 PF00005 ABC transporter DLE03_03945 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_03950 PF00497 Bacterial extracellular solute-binding proteins, family 3 DLE03_03960 PF06965 Na+/H+ antiporter 1 DLE03_03965 PF03951 Glutamine synthetase, beta-Grasp domain DLE03_03965 PF00120 Glutamine synthetase, catalytic domain DLE03_03975 PF13829 Domain of unknown function (DUF4191) DLE03_03980 PF01553 Acyltransferase DLE03_03985 PF04055 Radical SAM superfamily DLE03_03990 PF03099 Biotin/lipoate A/B protein ligase family DLE03_03995 PF03176 MMPL family DLE03_04000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DLE03_04000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DLE03_04005 PF01593 Flavin containing amine oxidoreductase DLE03_04010 PF08338 Domain of unknown function (DUF1731) DLE03_04010 PF01370 NAD dependent epimerase/dehydratase family DLE03_04015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DLE03_04015 PF00364 Biotin-requiring enzyme DLE03_04015 PF02817 e3 binding domain DLE03_04020 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLE03_04020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLE03_04025 PF02789 Cytosol aminopeptidase family, N-terminal domain DLE03_04025 PF00883 Cytosol aminopeptidase family, catalytic domain DLE03_04030 PF01571 Aminomethyltransferase folate-binding domain DLE03_04030 PF08669 Glycine cleavage T-protein C-terminal barrel domain DLE03_04040 PF00005 ABC transporter DLE03_04045 PF02361 Cobalt transport protein DLE03_04055 PF00248 Aldo/keto reductase family DLE03_04060 PF11241 Protein of unknown function (DUF3043) DLE03_04065 PF02445 Quinolinate synthetase A protein DLE03_04070 PF01521 Iron-sulphur cluster biosynthesis DLE03_04075 PF00294 pfkB family carbohydrate kinase DLE03_04085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DLE03_04090 PF00115 Cytochrome C and Quinol oxidase polypeptide I DLE03_04095 PF12270 Cytochrome c oxidase subunit IV DLE03_04105 PF00202 Aminotransferase class-III DLE03_04110 PF13631 Cytochrome b(N-terminal)/b6/petB DLE03_04115 PF00355 Rieske [2Fe-2S] domain DLE03_04120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DLE03_04120 PF00034 Cytochrome c DLE03_04125 PF00510 Cytochrome c oxidase subunit III DLE03_04135 PF02885 Glycosyl transferase family, helical bundle domain DLE03_04135 PF00591 Glycosyl transferase family, a/b domain DLE03_04140 PF01541 GIY-YIG catalytic domain DLE03_04140 PF00929 Exonuclease DLE03_04145 PF12146 Serine aminopeptidase, S33 DLE03_04150 PF00221 Aromatic amino acid lyase DLE03_04155 PF01979 Amidohydrolase family DLE03_04160 PF17391 Urocanase N-terminal domain DLE03_04160 PF01175 Urocanase Rossmann-like domain DLE03_04160 PF17392 Urocanase C-terminal domain DLE03_04175 PF01230 HIT domain DLE03_04180 PF08669 Glycine cleavage T-protein C-terminal barrel domain DLE03_04180 PF01266 FAD dependent oxidoreductase DLE03_04180 PF01571 Aminomethyltransferase folate-binding domain DLE03_04180 PF16350 FAD dependent oxidoreductase central domain DLE03_04190 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLE03_04190 PF04324 BFD-like [2Fe-2S] binding domain DLE03_04195 PF00701 Dihydrodipicolinate synthetase family DLE03_04200 PF05544 Proline racemase DLE03_04205 PF00171 Aldehyde dehydrogenase family DLE03_04210 PF00892 EamA-like transporter family DLE03_04240 PF00425 chorismate binding enzyme DLE03_04240 PF04715 Anthranilate synthase component I, N terminal region DLE03_04250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLE03_04250 PF03129 Anticodon binding domain DLE03_04250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DLE03_04255 PF01230 HIT domain DLE03_04265 PF01066 CDP-alcohol phosphatidyltransferase DLE03_04270 PF03279 Bacterial lipid A biosynthesis acyltransferase DLE03_04275 PF13439 Glycosyltransferase Family 4 DLE03_04290 PF01680 SOR/SNZ family DLE03_04295 PF01174 SNO glutamine amidotransferase family DLE03_04300 PF01709 Transcriptional regulator DLE03_04305 PF02075 Crossover junction endodeoxyribonuclease RuvC DLE03_04310 PF07499 RuvA, C-terminal domain DLE03_04310 PF01330 RuvA N terminal domain DLE03_04315 PF05496 Holliday junction DNA helicase RuvB P-loop domain DLE03_04315 PF17864 RuvB AAA lid domain DLE03_04315 PF05491 RuvB C-terminal winged helix domain DLE03_04320 PF07549 SecD/SecF GG Motif DLE03_04320 PF02355 Protein export membrane protein DLE03_04325 PF02355 Protein export membrane protein DLE03_04325 PF07549 SecD/SecF GG Motif DLE03_04330 PF04607 Region found in RelA / SpoT proteins DLE03_04330 PF13291 ACT domain DLE03_04330 PF02824 TGS domain DLE03_04335 PF03993 Domain of Unknown Function (DUF349) DLE03_04340 PF00753 Metallo-beta-lactamase superfamily DLE03_04345 PF03129 Anticodon binding domain DLE03_04345 PF13393 Histidyl-tRNA synthetase DLE03_04350 PF02938 GAD domain DLE03_04350 PF00152 tRNA synthetases class II (D, K and N) DLE03_04350 PF01336 OB-fold nucleic acid binding domain DLE03_04360 PF02272 DHHA1 domain DLE03_04360 PF01411 tRNA synthetases class II (A) DLE03_04360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DLE03_04365 PF03652 Holliday junction resolvase DLE03_04375 PF08501 Shikimate dehydrogenase substrate binding domain DLE03_04375 PF01488 Shikimate / quinate 5-dehydrogenase DLE03_04375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DLE03_04385 PF01264 Chorismate synthase DLE03_04390 PF01202 Shikimate kinase DLE03_04395 PF01761 3-dehydroquinate synthase DLE03_04400 PF01220 Dehydroquinase class II DLE03_04405 PF01132 Elongation factor P (EF-P) OB domain DLE03_04405 PF08207 Elongation factor P (EF-P) KOW-like domain DLE03_04405 PF09285 Elongation factor P, C-terminal DLE03_04410 PF01029 NusB family DLE03_04420 PF00156 Phosphoribosyl transferase domain DLE03_04425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DLE03_04425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DLE03_04430 PF01979 Amidohydrolase family DLE03_04435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DLE03_04435 PF00117 Glutamine amidotransferase class-I DLE03_04440 PF02142 MGS-like domain DLE03_04440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DLE03_04440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DLE03_04445 PF00175 Oxidoreductase NAD-binding domain DLE03_04445 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DLE03_04450 PF01180 Dihydroorotate dehydrogenase DLE03_04455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DLE03_04460 PF00625 Guanylate kinase DLE03_04465 PF01192 RNA polymerase Rpb6 DLE03_04470 PF04127 DNA / pantothenate metabolism flavoprotein DLE03_04470 PF02441 Flavoprotein DLE03_04475 PF02773 S-adenosylmethionine synthetase, C-terminal domain DLE03_04475 PF02772 S-adenosylmethionine synthetase, central domain DLE03_04475 PF00438 S-adenosylmethionine synthetase, N-terminal domain DLE03_04480 PF17764 3′ DNA-binding domain (3′BD) DLE03_04485 PF01327 Polypeptide deformylase DLE03_04490 PF02911 Formyl transferase, C-terminal domain DLE03_04490 PF00551 Formyl transferase DLE03_04495 PF01189 16S rRNA methyltransferase RsmB/F DLE03_04495 PF01029 NusB family DLE03_04500 PF00834 Ribulose-phosphate 3 epimerase family DLE03_04505 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DLE03_04510 PF08029 HisG, C-terminal domain DLE03_04510 PF01634 ATP phosphoribosyltransferase DLE03_04520 PF00005 ABC transporter DLE03_04525 PF03167 Uracil DNA glycosylase superfamily DLE03_04530 PF00860 Permease family DLE03_04540 PF04474 Protein of unknown function (DUF554) DLE03_04545 PF00107 Zinc-binding dehydrogenase DLE03_04545 PF08240 Alcohol dehydrogenase GroES-like domain DLE03_04550 PF00265 Thymidine kinase DLE03_04555 PF01757 Acyltransferase family DLE03_04560 PF00156 Phosphoribosyl transferase domain DLE03_04570 PF01546 Peptidase family M20/M25/M40 DLE03_04570 PF07687 Peptidase dimerisation domain DLE03_04575 PF00248 Aldo/keto reductase family DLE03_04595 PF01406 tRNA synthetases class I (C) catalytic domain DLE03_04605 PF02310 B12 binding domain DLE03_04605 PF02607 B12 binding domain DLE03_04605 PF02965 Vitamin B12 dependent methionine synthase, activation domain DLE03_04605 PF02574 Homocysteine S-methyltransferase DLE03_04605 PF00809 Pterin binding enzyme DLE03_04615 PF08704 tRNA methyltransferase complex GCD14 subunit DLE03_04620 PF13280 WYL domain DLE03_04630 PF02416 mttA/Hcf106 family DLE03_04635 PF00902 Sec-independent protein translocase protein (TatC) DLE03_04640 PF00781 Diacylglycerol kinase catalytic domain DLE03_04645 PF00270 DEAD/DEAH box helicase DLE03_04645 PF00271 Helicase conserved C-terminal domain DLE03_04645 PF08148 DSHCT (NUC185) domain DLE03_04650 PF01367 5'-3' exonuclease, C-terminal SAM fold DLE03_04650 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DLE03_04655 PF00535 Glycosyl transferase family 2 DLE03_04660 PF02347 Glycine cleavage system P-protein DLE03_04665 PF13411 MerR HTH family regulatory protein DLE03_04670 PF02577 Bifunctional nuclease DLE03_04675 PF00376 MerR family regulatory protein DLE03_04680 PF00498 FHA domain DLE03_04685 PF01597 Glycine cleavage H-protein DLE03_04690 PF01066 CDP-alcohol phosphatidyltransferase DLE03_04695 PF01926 50S ribosome-binding GTPase DLE03_04695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DLE03_04700 PF02153 Prephenate dehydrogenase DLE03_04710 PF01479 S4 domain DLE03_04710 PF00849 RNA pseudouridylate synthase DLE03_04715 PF04079 Segregation and condensation complex subunit ScpB DLE03_04720 PF02616 Segregation and condensation protein ScpA DLE03_04725 PF13614 AAA domain DLE03_04735 PF00589 Phage integrase family DLE03_04735 PF02899 Phage integrase, N-terminal SAM-like domain DLE03_04740 PF00117 Glutamine amidotransferase class-I DLE03_04740 PF06418 CTP synthase N-terminus DLE03_04745 PF02463 RecF/RecN/SMC N terminal domain DLE03_04750 PF01513 ATP-NAD kinase DLE03_04755 PF01728 FtsJ-like methyltransferase DLE03_04755 PF01479 S4 domain DLE03_04790 PF00579 tRNA synthetases class I (W and Y) DLE03_04795 PF00206 Lyase DLE03_04795 PF14698 Argininosuccinate lyase C-terminal DLE03_04800 PF02863 Arginine repressor, C-terminal domain DLE03_04800 PF01316 Arginine repressor, DNA binding domain DLE03_04805 PF00202 Aminotransferase class-III DLE03_04810 PF00696 Amino acid kinase family DLE03_04815 PF01960 ArgJ family DLE03_04820 PF01118 Semialdehyde dehydrogenase, NAD binding domain DLE03_04820 PF02774 Semialdehyde dehydrogenase, dimerisation domain DLE03_04825 PF03484 tRNA synthetase B5 domain DLE03_04825 PF03147 Ferredoxin-fold anticodon binding domain DLE03_04825 PF03483 B3/4 domain DLE03_04825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DLE03_04825 PF01588 Putative tRNA binding domain DLE03_04830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DLE03_04830 PF01409 tRNA synthetases class II core domain (F) DLE03_04835 PF00588 SpoU rRNA Methylase family DLE03_04835 PF08032 RNA 2'-O ribose methyltransferase substrate binding DLE03_04840 PF00453 Ribosomal protein L20 DLE03_04845 PF01632 Ribosomal protein L35 DLE03_04850 PF00707 Translation initiation factor IF-3, C-terminal domain DLE03_04850 PF05198 Translation initiation factor IF-3, N-terminal domain DLE03_04875 PF00664 ABC transporter transmembrane region DLE03_04875 PF00005 ABC transporter DLE03_04880 PF01883 Iron-sulfur cluster assembly protein DLE03_04885 PF01592 NifU-like N terminal domain DLE03_04890 PF00266 Aminotransferase class-V DLE03_04895 PF00005 ABC transporter DLE03_04900 PF00355 Rieske [2Fe-2S] domain DLE03_04905 PF01458 Uncharacterized protein family (UPF0051) DLE03_04910 PF01458 Uncharacterized protein family (UPF0051) DLE03_04920 PF02628 Cytochrome oxidase assembly protein DLE03_04925 PF02779 Transketolase, pyrimidine binding domain DLE03_04925 PF02780 Transketolase, C-terminal domain DLE03_04925 PF00456 Transketolase, thiamine diphosphate binding domain DLE03_04930 PF00342 Phosphoglucose isomerase DLE03_04940 PF03840 Preprotein translocase SecG subunit DLE03_04945 PF00121 Triosephosphate isomerase DLE03_04950 PF00162 Phosphoglycerate kinase DLE03_04955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DLE03_04955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DLE03_04960 PF02650 WhiA C-terminal HTH domain DLE03_04960 PF14527 WhiA LAGLIDADG-like domain DLE03_04960 PF10298 WhiA N-terminal LAGLIDADG-like domain DLE03_04965 PF01933 Uncharacterised protein family UPF0052 DLE03_04970 PF03668 P-loop ATPase protein family DLE03_04975 PF01541 GIY-YIG catalytic domain DLE03_04975 PF02151 UvrB/uvrC motif DLE03_04975 PF08459 UvrC Helix-hairpin-helix N-terminal DLE03_04980 PF17755 UvrA DNA-binding domain DLE03_04980 PF17760 UvrA interaction domain DLE03_04980 PF00005 ABC transporter DLE03_04985 PF00271 Helicase conserved C-terminal domain DLE03_04985 PF17757 UvrB interaction domain DLE03_04985 PF12344 Ultra-violet resistance protein B DLE03_04985 PF04851 Type III restriction enzyme, res subunit DLE03_04985 PF02151 UvrB/uvrC motif DLE03_04990 PF01121 Dephospho-CoA kinase DLE03_04995 PF00575 S1 RNA binding domain DLE03_05005 PF01367 5'-3' exonuclease, C-terminal SAM fold DLE03_05005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DLE03_05005 PF00476 DNA polymerase family A DLE03_05010 PF03061 Thioesterase superfamily DLE03_05015 PF00005 ABC transporter DLE03_05020 PF00005 ABC transporter DLE03_05020 PF12399 Branched-chain amino acid ATP-binding cassette transporter DLE03_05025 PF11862 Domain of unknown function (DUF3382) DLE03_05025 PF02653 Branched-chain amino acid transport system / permease component DLE03_05030 PF02653 Branched-chain amino acid transport system / permease component DLE03_05040 PF03861 ANTAR domain DLE03_05040 PF00072 Response regulator receiver domain DLE03_05050 PF02887 Pyruvate kinase, alpha/beta domain DLE03_05050 PF00224 Pyruvate kinase, barrel domain DLE03_05055 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLE03_05055 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DLE03_05060 PF01645 Conserved region in glutamate synthase DLE03_05060 PF01493 GXGXG motif DLE03_05060 PF00310 Glutamine amidotransferases class-II DLE03_05060 PF04898 Glutamate synthase central domain DLE03_05070 PF01790 Prolipoprotein diacylglyceryl transferase DLE03_05085 PF00290 Tryptophan synthase alpha chain DLE03_05090 PF00291 Pyridoxal-phosphate dependent enzyme DLE03_05095 PF00218 Indole-3-glycerol phosphate synthase DLE03_05100 PF00425 chorismate binding enzyme DLE03_05100 PF04715 Anthranilate synthase component I, N terminal region DLE03_05105 PF01502 Phosphoribosyl-AMP cyclohydrolase DLE03_05110 PF00977 Histidine biosynthesis protein DLE03_05115 PF00977 Histidine biosynthesis protein DLE03_05120 PF00117 Glutamine amidotransferase class-I DLE03_05125 PF00475 Imidazoleglycerol-phosphate dehydratase DLE03_05130 PF00155 Aminotransferase class I and II DLE03_05135 PF00815 Histidinol dehydrogenase DLE03_05140 PF07733 Bacterial DNA polymerase III alpha NTPase domain DLE03_05140 PF02811 PHP domain DLE03_05140 PF14579 Helix-hairpin-helix motif DLE03_05140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DLE03_05145 PF00849 RNA pseudouridylate synthase DLE03_05150 PF01252 Signal peptidase (SPase) II DLE03_05160 PF08264 Anticodon-binding domain of tRNA DLE03_05160 PF00133 tRNA synthetases class I (I, L, M and V) DLE03_05170 PF04472 Cell division protein SepF DLE03_05175 PF01168 Alanine racemase, N-terminal domain DLE03_05185 PF12327 FtsZ family, C-terminal domain DLE03_05185 PF00091 Tubulin/FtsZ family, GTPase domain DLE03_05195 PF08245 Mur ligase middle domain DLE03_05195 PF02875 Mur ligase family, glutamate ligase domain DLE03_05195 PF01225 Mur ligase family, catalytic domain DLE03_05200 PF04101 Glycosyltransferase family 28 C-terminal domain DLE03_05200 PF03033 Glycosyltransferase family 28 N-terminal domain DLE03_05205 PF01098 Cell cycle protein DLE03_05210 PF08245 Mur ligase middle domain DLE03_05215 PF00953 Glycosyl transferase family 4 DLE03_05215 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DLE03_05220 PF01225 Mur ligase family, catalytic domain DLE03_05220 PF08245 Mur ligase middle domain DLE03_05220 PF02875 Mur ligase family, glutamate ligase domain DLE03_05225 PF02875 Mur ligase family, glutamate ligase domain DLE03_05225 PF08245 Mur ligase middle domain DLE03_05225 PF01225 Mur ligase family, catalytic domain DLE03_05230 PF03717 Penicillin-binding Protein dimerisation domain DLE03_05230 PF00905 Penicillin binding protein transpeptidase domain DLE03_05240 PF01795 MraW methylase family DLE03_05245 PF02381 MraZ protein, putative antitoxin-like DLE03_05255 PF11799 impB/mucB/samB family C-terminal domain DLE03_05255 PF00817 impB/mucB/samB family DLE03_05260 PF07733 Bacterial DNA polymerase III alpha NTPase domain DLE03_05260 PF14579 Helix-hairpin-helix motif DLE03_05260 PF02811 PHP domain DLE03_05260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DLE03_05275 PF01925 Sulfite exporter TauE/SafE DLE03_05280 PF07690 Major Facilitator Superfamily DLE03_05290 PF01451 Low molecular weight phosphotyrosine protein phosphatase DLE03_05295 PF00230 Major intrinsic protein DLE03_05310 PF00535 Glycosyl transferase family 2 DLE03_05315 PF01593 Flavin containing amine oxidoreductase DLE03_05320 PF01066 CDP-alcohol phosphatidyltransferase DLE03_05325 PF02219 Methylenetetrahydrofolate reductase DLE03_05335 PF01593 Flavin containing amine oxidoreductase DLE03_05350 PF02224 Cytidylate kinase DLE03_05350 PF02569 Pantoate-beta-alanine ligase DLE03_05355 PF03793 PASTA domain DLE03_05355 PF00069 Protein kinase domain DLE03_05360 PF01261 Xylose isomerase-like TIM barrel DLE03_05370 PF01212 Beta-eliminating lyase DLE03_05375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DLE03_05375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DLE03_05380 PF01474 Class-II DAHP synthetase family DLE03_05385 PF00365 Phosphofructokinase DLE03_05390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DLE03_05390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DLE03_05395 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DLE03_05405 PF00483 Nucleotidyl transferase DLE03_05410 PF00534 Glycosyl transferases group 1 DLE03_05410 PF13439 Glycosyltransferase Family 4 DLE03_05420 PF02673 Bacitracin resistance protein BacA DLE03_05425 PF07650 KH domain DLE03_05425 PF01926 50S ribosome-binding GTPase DLE03_05430 PF02481 DNA recombination-mediator protein A DLE03_05430 PF17782 DprA winged helix domain DLE03_05435 PF13335 Magnesium chelatase, subunit ChlI C-terminal DLE03_05435 PF01078 Magnesium chelatase, subunit ChlI DLE03_05440 PF02021 Uncharacterised protein family UPF0102 DLE03_05445 PF01351 Ribonuclease HII DLE03_05450 PF10502 Signal peptidase, peptidase S26 DLE03_05455 PF01245 Ribosomal protein L19 DLE03_05460 PF00459 Inositol monophosphatase family DLE03_05465 PF11268 Protein of unknown function (DUF3071) DLE03_05475 PF04227 Indigoidine synthase A like protein DLE03_05480 PF00294 pfkB family carbohydrate kinase DLE03_05485 PF03989 DNA gyrase C-terminal domain, beta-propeller DLE03_05485 PF00521 DNA gyrase/topoisomerase IV, subunit A DLE03_05495 PF00005 ABC transporter DLE03_05495 PF16326 ABC transporter C-terminal domain DLE03_05495 PF12848 ABC transporter DLE03_05500 PF00986 DNA gyrase B subunit, carboxyl terminus DLE03_05500 PF01751 Toprim domain DLE03_05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLE03_05500 PF00204 DNA gyrase B DLE03_05515 PF04545 Sigma-70, region 4 DLE03_05515 PF00140 Sigma-70 factor, region 1.2 DLE03_05515 PF04542 Sigma-70 region 2 DLE03_05515 PF04539 Sigma-70 region 3 DLE03_05520 PF00561 alpha/beta hydrolase fold DLE03_05535 PF00293 NUDIX domain DLE03_05540 PF00005 ABC transporter DLE03_05545 PF01032 FecCD transport family DLE03_05550 PF01497 Periplasmic binding protein DLE03_05570 PF13307 Helicase C-terminal domain DLE03_05575 PF00892 EamA-like transporter family DLE03_05580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DLE03_05580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DLE03_05585 PF00171 Aldehyde dehydrogenase family DLE03_05590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DLE03_05590 PF13378 Enolase C-terminal domain-like DLE03_05605 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_05610 PF00571 CBS domain DLE03_05610 PF00005 ABC transporter DLE03_05615 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_05625 PF00465 Iron-containing alcohol dehydrogenase DLE03_05630 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DLE03_05640 PF00885 6,7-dimethyl-8-ribityllumazine synthase DLE03_05650 PF00677 Lumazine binding domain DLE03_05655 PF01872 RibD C-terminal domain DLE03_05655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DLE03_05665 PF03477 ATP cone domain DLE03_05670 PF01476 LysM domain DLE03_05675 PF00717 Peptidase S24-like DLE03_05675 PF01726 LexA DNA binding domain DLE03_05690 PF01050 Mannose-6-phosphate isomerase DLE03_05690 PF00483 Nucleotidyl transferase DLE03_05695 PF00480 ROK family DLE03_05705 PF02540 NAD synthase DLE03_05705 PF00958 GMP synthase C terminal domain DLE03_05705 PF00117 Glutamine amidotransferase class-I DLE03_05715 PF00171 Aldehyde dehydrogenase family DLE03_05720 PF00120 Glutamine synthetase, catalytic domain DLE03_05735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DLE03_05735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DLE03_05760 PF18755 Restriction Enzyme Adenine Methylase Associated DLE03_05760 PF01555 DNA methylase DLE03_05800 PF06827 Zinc finger found in FPG and IleRS DLE03_05800 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DLE03_05800 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DLE03_05870 PF00005 ABC transporter DLE03_05880 PF00491 Arginase family DLE03_05895 PF03350 Uncharacterized protein family, UPF0114 DLE03_05900 PF01557 Fumarylacetoacetate (FAA) hydrolase family DLE03_05905 PF02595 Glycerate kinase family DLE03_05910 PF00324 Amino acid permease DLE03_05920 PF01565 FAD binding domain DLE03_05920 PF02913 FAD linked oxidases, C-terminal domain DLE03_05935 PF00749 tRNA synthetases class I (E and Q), catalytic domain DLE03_05940 PF01557 Fumarylacetoacetate (FAA) hydrolase family DLE03_05955 PF02130 Uncharacterized protein family UPF0054 DLE03_05960 PF02562 PhoH-like protein DLE03_05965 PF04452 RNA methyltransferase DLE03_05970 PF00684 DnaJ central domain DLE03_05970 PF00226 DnaJ domain DLE03_05970 PF01556 DnaJ C terminal domain DLE03_05975 PF01628 HrcA protein C terminal domain DLE03_05975 PF08220 DeoR-like helix-turn-helix domain DLE03_05980 PF04055 Radical SAM superfamily DLE03_05985 PF00009 Elongation factor Tu GTP binding domain DLE03_05985 PF00679 Elongation factor G C-terminus DLE03_05985 PF06421 GTP-binding protein LepA C-terminus DLE03_05990 PF01649 Ribosomal protein S20 DLE03_06010 PF08264 Anticodon-binding domain of tRNA DLE03_06010 PF00133 tRNA synthetases class I (I, L, M and V) DLE03_06010 PF13603 Leucyl-tRNA synthetase, Domain 2 DLE03_06010 PF09334 tRNA synthetases class I (M) DLE03_06020 PF00300 Histidine phosphatase superfamily (branch 1) DLE03_06030 PF01467 Cytidylyltransferase-like DLE03_06035 PF00533 BRCA1 C Terminus (BRCT) domain DLE03_06035 PF01653 NAD-dependent DNA ligase adenylation domain DLE03_06035 PF03120 NAD-dependent DNA ligase OB-fold domain DLE03_06035 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DLE03_06035 PF12826 Helix-hairpin-helix motif DLE03_06045 PF00266 Aminotransferase class-V DLE03_06050 PF01012 Electron transfer flavoprotein domain DLE03_06050 PF00766 Electron transfer flavoprotein FAD-binding domain DLE03_06055 PF01012 Electron transfer flavoprotein domain DLE03_06060 PF13439 Glycosyltransferase Family 4 DLE03_06060 PF00534 Glycosyl transferases group 1 DLE03_06065 PF13579 Glycosyl transferase 4-like domain DLE03_06065 PF00534 Glycosyl transferases group 1 DLE03_06075 PF00128 Alpha amylase, catalytic domain DLE03_06075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DLE03_06080 PF00698 Acyl transferase domain DLE03_06085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DLE03_06085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DLE03_06090 PF00550 Phosphopantetheine attachment site DLE03_06095 PF02801 Beta-ketoacyl synthase, C-terminal domain DLE03_06095 PF00109 Beta-ketoacyl synthase, N-terminal domain DLE03_06100 PF01039 Carboxyl transferase domain DLE03_06105 PF00484 Carbonic anhydrase DLE03_06120 PF00313 'Cold-shock' DNA-binding domain DLE03_06145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DLE03_06145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DLE03_06150 PF16875 Glycosyl hydrolase family 36 N-terminal domain DLE03_06150 PF16874 Glycosyl hydrolase family 36 C-terminal domain DLE03_06160 PF17941 Polyphosphate kinase C-terminal domain 1 DLE03_06160 PF02503 Polyphosphate kinase middle domain DLE03_06160 PF13089 Polyphosphate kinase N-terminal domain DLE03_06160 PF13090 Polyphosphate kinase C-terminal domain 2 DLE03_06165 PF00293 NUDIX domain DLE03_06165 PF00300 Histidine phosphatase superfamily (branch 1) DLE03_06170 PF02541 Ppx/GppA phosphatase family DLE03_06175 PF01261 Xylose isomerase-like TIM barrel DLE03_06180 PF01895 PhoU domain DLE03_06185 PF00512 His Kinase A (phospho-acceptor) domain DLE03_06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLE03_06190 PF00486 Transcriptional regulatory protein, C terminal DLE03_06190 PF00072 Response regulator receiver domain DLE03_06195 PF03853 YjeF-related protein N-terminus DLE03_06195 PF01256 Carbohydrate kinase DLE03_06200 PF00072 Response regulator receiver domain DLE03_06200 PF00196 Bacterial regulatory proteins, luxR family DLE03_06215 PF01266 FAD dependent oxidoreductase DLE03_06215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DLE03_06220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DLE03_06220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DLE03_06225 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DLE03_06225 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DLE03_06230 PF00288 GHMP kinases N terminal domain DLE03_06230 PF10509 Galactokinase galactose-binding signature DLE03_06230 PF08544 GHMP kinases C terminal DLE03_06235 PF00390 Malic enzyme, N-terminal domain DLE03_06235 PF03949 Malic enzyme, NAD binding domain DLE03_06240 PF00595 PDZ domain DLE03_06245 PF00355 Rieske [2Fe-2S] domain DLE03_06245 PF10518 TAT (twin-arginine translocation) pathway signal sequence DLE03_06255 PF13662 Toprim domain DLE03_06255 PF08275 DNA primase catalytic core, N-terminal domain DLE03_06255 PF10410 DnaB-helicase binding domain of primase DLE03_06255 PF08278 DNA primase DnaG DnaB-binding DLE03_06255 PF01807 CHC2 zinc finger DLE03_06260 PF13286 Phosphohydrolase-associated domain DLE03_06260 PF01966 HD domain DLE03_06270 PF01207 Dihydrouridine synthase (Dus) DLE03_06275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLE03_06275 PF03129 Anticodon binding domain DLE03_06290 PF01255 Putative undecaprenyl diphosphate synthase DLE03_06295 PF02565 Recombination protein O C terminal DLE03_06295 PF11967 Recombination protein O N terminal DLE03_06300 PF00682 HMGL-like DLE03_06300 PF08502 LeuA allosteric (dimerisation) domain DLE03_06315 PF03951 Glutamine synthetase, beta-Grasp domain DLE03_06315 PF00120 Glutamine synthetase, catalytic domain DLE03_06320 PF02540 NAD synthase DLE03_06320 PF00795 Carbon-nitrogen hydrolase DLE03_06325 PF02548 Ketopantoate hydroxymethyltransferase DLE03_06345 PF01431 Peptidase family M13 DLE03_06345 PF05649 Peptidase family M13 DLE03_06355 PF00005 ABC transporter DLE03_06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLE03_06360 PF00005 ABC transporter DLE03_06360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLE03_06365 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_06370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DLE03_06375 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_06375 PF12911 N-terminal TM domain of oligopeptide transport permease C DLE03_06390 PF01702 Queuine tRNA-ribosyltransferase DLE03_06395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DLE03_06395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DLE03_06400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DLE03_06400 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DLE03_06405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DLE03_06415 PF00196 Bacterial regulatory proteins, luxR family DLE03_06415 PF17874 MalT-like TPR region DLE03_06420 PF00202 Aminotransferase class-III DLE03_06425 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DLE03_06425 PF01276 Orn/Lys/Arg decarboxylase, major domain DLE03_06430 PF00106 short chain dehydrogenase DLE03_06455 PF03741 Integral membrane protein TerC family DLE03_06460 PF00171 Aldehyde dehydrogenase family DLE03_06470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLE03_06470 PF00205 Thiamine pyrophosphate enzyme, central domain DLE03_06470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DLE03_06475 PF01261 Xylose isomerase-like TIM barrel DLE03_06480 PF00923 Transaldolase/Fructose-6-phosphate aldolase DLE03_06485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DLE03_06485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DLE03_06490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DLE03_06490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DLE03_06495 PF00892 EamA-like transporter family DLE03_06515 PF10604 Polyketide cyclase / dehydrase and lipid transport DLE03_06525 PF02911 Formyl transferase, C-terminal domain DLE03_06525 PF01370 NAD dependent epimerase/dehydratase family DLE03_06525 PF00551 Formyl transferase DLE03_06530 PF04235 Protein of unknown function (DUF418) DLE03_06550 PF08240 Alcohol dehydrogenase GroES-like domain DLE03_06550 PF00107 Zinc-binding dehydrogenase DLE03_06555 PF01232 Mannitol dehydrogenase Rossmann domain DLE03_06555 PF08125 Mannitol dehydrogenase C-terminal domain DLE03_06560 PF00528 Binding-protein-dependent transport system inner membrane component DLE03_06570 PF01547 Bacterial extracellular solute-binding protein DLE03_06580 PF03741 Integral membrane protein TerC family DLE03_06585 PF00300 Histidine phosphatase superfamily (branch 1) DLE03_06585 PF13456 Reverse transcriptase-like DLE03_06610 PF00578 AhpC/TSA family DLE03_06615 PF11253 Protein of unknown function (DUF3052) DLE03_06620 PF00456 Transketolase, thiamine diphosphate binding domain DLE03_06620 PF17831 Pyruvate dehydrogenase E1 component middle domain DLE03_06625 PF11896 Domain of unknown function (DUF3416) DLE03_06630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DLE03_06630 PF00128 Alpha amylase, catalytic domain DLE03_06630 PF02806 Alpha amylase, C-terminal all-beta domain DLE03_06660 PF00171 Aldehyde dehydrogenase family DLE03_06670 PF00005 ABC transporter DLE03_06690 PF01923 Cobalamin adenosyltransferase DLE03_06695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DLE03_06705 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DLE03_06710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLE03_06710 PF02874 ATP synthase alpha/beta family, beta-barrel domain DLE03_06715 PF00231 ATP synthase DLE03_06720 PF00306 ATP synthase alpha/beta chain, C terminal domain DLE03_06720 PF02874 ATP synthase alpha/beta family, beta-barrel domain DLE03_06720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLE03_06725 PF00213 ATP synthase delta (OSCP) subunit DLE03_06730 PF00430 ATP synthase B/B' CF(0) DLE03_06735 PF00137 ATP synthase subunit C DLE03_06740 PF00119 ATP synthase A chain DLE03_06755 PF00953 Glycosyl transferase family 4 DLE03_06760 PF00464 Serine hydroxymethyltransferase DLE03_06770 PF17827 PrmC N-terminal domain DLE03_06770 PF05175 Methyltransferase small domain DLE03_06775 PF00472 RF-1 domain DLE03_06775 PF03462 PCRF domain DLE03_06780 PF01197 Ribosomal protein L31 DLE03_06790 PF07497 Rho termination factor, RNA-binding domain DLE03_06790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLE03_06790 PF07498 Rho termination factor, N-terminal domain DLE03_06795 PF08544 GHMP kinases C terminal DLE03_06795 PF00288 GHMP kinases N terminal domain DLE03_06800 PF00291 Pyridoxal-phosphate dependent enzyme DLE03_06805 PF00742 Homoserine dehydrogenase DLE03_06805 PF03447 Homoserine dehydrogenase, NAD binding domain DLE03_06805 PF01842 ACT domain DLE03_06810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DLE03_06810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DLE03_06815 PF00750 tRNA synthetases class I (R) DLE03_06815 PF05746 DALR anticodon binding domain DLE03_06815 PF03485 Arginyl tRNA synthetase N terminal domain DLE03_06820 PF13407 Periplasmic binding protein domain DLE03_06825 PF00005 ABC transporter DLE03_06830 PF02653 Branched-chain amino acid transport system / permease component DLE03_06845 PF01053 Cys/Met metabolism PLP-dependent enzyme DLE03_06855 PF01036 Bacteriorhodopsin-like protein DLE03_06865 PF03006 Haemolysin-III related DLE03_06875 PF01757 Acyltransferase family DLE03_06885 PF01725 Ham1 family DLE03_06890 PF03725 3' exoribonuclease family, domain 2 DLE03_06890 PF01138 3' exoribonuclease family, domain 1 DLE03_06895 PF01177 Asp/Glu/Hydantoin racemase DLE03_06900 PF00291 Pyridoxal-phosphate dependent enzyme DLE03_06905 PF02597 ThiS family DLE03_06910 PF14464 Prokaryotic homologs of the JAB domain DLE03_06915 PF09438 Domain of unknown function (DUF2017) DLE03_06920 PF02617 ATP-dependent Clp protease adaptor protein ClpS DLE03_06950 PF05726 Pirin C-terminal cupin domain DLE03_06950 PF02678 Pirin DLE03_06960 PF02233 NAD(P) transhydrogenase beta subunit DLE03_06965 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DLE03_06970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DLE03_06970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DLE03_06975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DLE03_06975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain