locus-tag class description IPM43_00010 PF13369 Transglutaminase-like superfamily IPM43_00015 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_00015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_00015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_00025 PF02401 LytB protein IPM43_00035 PF01926 50S ribosome-binding GTPase IPM43_00035 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IPM43_00070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IPM43_00085 PF08962 Domain of unknown function (DUF1876) IPM43_00095 PF00144 Beta-lactamase IPM43_00110 PF02586 SOS response associated peptidase (SRAP) IPM43_00115 PF01066 CDP-alcohol phosphatidyltransferase IPM43_00120 PF01230 HIT domain IPM43_00125 PF00483 Nucleotidyl transferase IPM43_00130 PF01597 Glycine cleavage H-protein IPM43_00135 PF00498 FHA domain IPM43_00140 PF00376 MerR family regulatory protein IPM43_00145 PF02577 Bifunctional nuclease IPM43_00150 PF13411 MerR HTH family regulatory protein IPM43_00155 PF01571 Aminomethyltransferase folate-binding domain IPM43_00155 PF08669 Glycine cleavage T-protein C-terminal barrel domain IPM43_00165 PF02347 Glycine cleavage system P-protein IPM43_00190 PF00196 Bacterial regulatory proteins, luxR family IPM43_00190 PF00072 Response regulator receiver domain IPM43_00205 PF01380 SIS domain IPM43_00205 PF01418 Helix-turn-helix domain, rpiR family IPM43_00210 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IPM43_00215 PF01212 Beta-eliminating lyase IPM43_00230 PF00294 pfkB family carbohydrate kinase IPM43_00245 PF00132 Bacterial transferase hexapeptide (six repeats) IPM43_00255 PF00378 Enoyl-CoA hydratase/isomerase IPM43_00275 PF02511 Thymidylate synthase complementing protein IPM43_00280 PF01553 Acyltransferase IPM43_00285 PF00107 Zinc-binding dehydrogenase IPM43_00285 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_00295 PF00270 DEAD/DEAH box helicase IPM43_00295 PF08148 DSHCT (NUC185) domain IPM43_00295 PF00271 Helicase conserved C-terminal domain IPM43_00300 PF00902 Sec-independent protein translocase protein (TatC) IPM43_00305 PF02416 mttA/Hcf106 family IPM43_00310 PF03009 Glycerophosphoryl diester phosphodiesterase family IPM43_00325 PF10502 Signal peptidase, peptidase S26 IPM43_00330 PF03136 Pup-ligase protein IPM43_00335 PF02626 Carboxyltransferase domain, subdomain A and B IPM43_00345 PF03746 LamB/YcsF family IPM43_00355 PF00227 Proteasome subunit IPM43_00360 PF00227 Proteasome subunit IPM43_00365 PF05639 Pup-like protein IPM43_00370 PF03136 Pup-ligase protein IPM43_00375 PF16450 Proteasomal ATPase OB C-terminal domain IPM43_00375 PF17758 Proteasomal ATPase OB N-terminal domain IPM43_00375 PF00004 ATPase family associated with various cellular activities (AAA) IPM43_00385 PF08704 tRNA methyltransferase complex GCD14 subunit IPM43_00390 PF01171 PP-loop family IPM43_00420 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IPM43_00425 PF13380 CoA binding domain IPM43_00425 PF13607 Succinyl-CoA ligase like flavodoxin domain IPM43_00445 PF01979 Amidohydrolase family IPM43_00455 PF02779 Transketolase, pyrimidine binding domain IPM43_00455 PF02780 Transketolase, C-terminal domain IPM43_00455 PF00456 Transketolase, thiamine diphosphate binding domain IPM43_00460 PF00923 Transaldolase/Fructose-6-phosphate aldolase IPM43_00470 PF02421 Ferrous iron transport protein B IPM43_00470 PF07664 Ferrous iron transport protein B C terminus IPM43_00470 PF07670 Nucleoside recognition IPM43_00485 PF00005 ABC transporter IPM43_00505 PF00171 Aldehyde dehydrogenase family IPM43_00515 PF01565 FAD binding domain IPM43_00520 PF02913 FAD linked oxidases, C-terminal domain IPM43_00520 PF01565 FAD binding domain IPM43_00535 PF16193 AAA C-terminal domain IPM43_00535 PF12002 MgsA AAA+ ATPase C terminal IPM43_00535 PF00004 ATPase family associated with various cellular activities (AAA) IPM43_00540 PF00293 NUDIX domain IPM43_00545 PF00152 tRNA synthetases class II (D, K and N) IPM43_00545 PF01336 OB-fold nucleic acid binding domain IPM43_00545 PF02938 GAD domain IPM43_00550 PF03129 Anticodon binding domain IPM43_00550 PF13393 Histidyl-tRNA synthetase IPM43_00555 PF02824 TGS domain IPM43_00555 PF04607 Region found in RelA / SpoT proteins IPM43_00555 PF13291 ACT domain IPM43_00560 PF00156 Phosphoribosyl transferase domain IPM43_00565 PF07549 SecD/SecF GG Motif IPM43_00565 PF02355 Protein export membrane protein IPM43_00570 PF07549 SecD/SecF GG Motif IPM43_00570 PF02355 Protein export membrane protein IPM43_00575 PF02699 Preprotein translocase subunit IPM43_00580 PF01702 Queuine tRNA-ribosyltransferase IPM43_00585 PF02547 Queuosine biosynthesis protein IPM43_00590 PF01738 Dienelactone hydrolase family IPM43_00595 PF17864 RuvB AAA lid domain IPM43_00595 PF05496 Holliday junction DNA helicase RuvB P-loop domain IPM43_00595 PF05491 RuvB C-terminal winged helix domain IPM43_00600 PF07499 RuvA, C-terminal domain IPM43_00600 PF01330 RuvA N terminal domain IPM43_00605 PF02075 Crossover junction endodeoxyribonuclease RuvC IPM43_00615 PF01709 Transcriptional regulator IPM43_00620 PF01174 SNO glutamine amidotransferase family IPM43_00625 PF01680 SOR/SNZ family IPM43_00635 PF01435 Peptidase family M48 IPM43_00640 PF04011 LemA family IPM43_00645 PF13439 Glycosyltransferase Family 4 IPM43_00655 PF00924 Mechanosensitive ion channel IPM43_00670 PF03279 Bacterial lipid A biosynthesis acyltransferase IPM43_00690 PF01230 HIT domain IPM43_00695 PF03129 Anticodon binding domain IPM43_00695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM43_00695 PF02824 TGS domain IPM43_00695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPM43_00700 PF01553 Acyltransferase IPM43_00700 PF00501 AMP-binding enzyme IPM43_00700 PF13193 AMP-binding enzyme C-terminal domain IPM43_00705 PF01406 tRNA synthetases class I (C) catalytic domain IPM43_00720 PF03190 Protein of unknown function, DUF255 IPM43_00730 PF00108 Thiolase, N-terminal domain IPM43_00730 PF02803 Thiolase, C-terminal domain IPM43_00750 PF14579 Helix-hairpin-helix motif IPM43_00750 PF02811 PHP domain IPM43_00750 PF07733 Bacterial DNA polymerase III alpha NTPase domain IPM43_00750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IPM43_00755 PF10759 Protein of unknown function (DUF2587) IPM43_00765 PF02082 Transcriptional regulator IPM43_00770 PF01479 S4 domain IPM43_00770 PF00849 RNA pseudouridylate synthase IPM43_00775 PF01252 Signal peptidase (SPase) II IPM43_00780 PF01258 Prokaryotic dksA/traR C4-type zinc finger IPM43_00785 PF02594 Uncharacterised ACR, YggU family COG1872 IPM43_00790 PF00133 tRNA synthetases class I (I, L, M and V) IPM43_00790 PF08264 Anticodon-binding domain of tRNA IPM43_00800 PF02325 YGGT family IPM43_00805 PF04472 Cell division protein SepF IPM43_00810 PF01168 Alanine racemase, N-terminal domain IPM43_00815 PF00091 Tubulin/FtsZ family, GTPase domain IPM43_00815 PF12327 FtsZ family, C-terminal domain IPM43_00820 PF03799 Cell division protein FtsQ IPM43_00820 PF08478 POTRA domain, FtsQ-type IPM43_00825 PF01565 FAD binding domain IPM43_00825 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IPM43_00830 PF01225 Mur ligase family, catalytic domain IPM43_00830 PF02875 Mur ligase family, glutamate ligase domain IPM43_00830 PF08245 Mur ligase middle domain IPM43_00835 PF03033 Glycosyltransferase family 28 N-terminal domain IPM43_00835 PF04101 Glycosyltransferase family 28 C-terminal domain IPM43_00840 PF01098 Cell cycle protein IPM43_00845 PF02875 Mur ligase family, glutamate ligase domain IPM43_00845 PF08245 Mur ligase middle domain IPM43_00850 PF00953 Glycosyl transferase family 4 IPM43_00850 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IPM43_00855 PF01225 Mur ligase family, catalytic domain IPM43_00855 PF02875 Mur ligase family, glutamate ligase domain IPM43_00855 PF08245 Mur ligase middle domain IPM43_00860 PF03717 Penicillin-binding Protein dimerisation domain IPM43_00860 PF00905 Penicillin binding protein transpeptidase domain IPM43_00870 PF01795 MraW methylase family IPM43_00875 PF02381 MraZ protein, putative antitoxin-like IPM43_00880 PF01551 Peptidase family M23 IPM43_00885 PF03099 Biotin/lipoate A/B protein ligase family IPM43_00900 PF00480 ROK family IPM43_00905 PF17863 AAA lid domain IPM43_00905 PF07726 ATPase family associated with various cellular activities (AAA) IPM43_00925 PF11799 impB/mucB/samB family C-terminal domain IPM43_00925 PF00817 impB/mucB/samB family IPM43_00930 PF00535 Glycosyl transferase family 2 IPM43_00940 PF00459 Inositol monophosphatase family IPM43_00945 PF00072 Response regulator receiver domain IPM43_00945 PF00486 Transcriptional regulatory protein, C terminal IPM43_00950 PF00512 His Kinase A (phospho-acceptor) domain IPM43_00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_00950 PF00672 HAMP domain IPM43_00960 PF00365 Phosphofructokinase IPM43_00965 PF00365 Phosphofructokinase IPM43_00970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IPM43_00970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IPM43_00980 PF00155 Aminotransferase class I and II IPM43_00985 PF00719 Inorganic pyrophosphatase IPM43_00990 PF00480 ROK family IPM43_01005 PF13439 Glycosyltransferase Family 4 IPM43_01005 PF00534 Glycosyl transferases group 1 IPM43_01010 PF08331 Domain of unknown function (DUF1730) IPM43_01020 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IPM43_01020 PF06974 Protein of unknown function (DUF1298) IPM43_01025 PF00732 GMC oxidoreductase IPM43_01025 PF05199 GMC oxidoreductase IPM43_01030 PF00586 AIR synthase related protein, N-terminal domain IPM43_01030 PF02769 AIR synthase related protein, C-terminal domain IPM43_01030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IPM43_01040 PF01259 SAICAR synthetase IPM43_01045 PF00156 Phosphoribosyl transferase domain IPM43_01045 PF13537 Glutamine amidotransferase domain IPM43_01055 PF00551 Formyl transferase IPM43_01060 PF00571 CBS domain IPM43_01060 PF00478 IMP dehydrogenase / GMP reductase domain IPM43_01075 PF00004 ATPase family associated with various cellular activities (AAA) IPM43_01075 PF17866 AAA lid domain IPM43_01085 PF03023 Lipid II flippase MurJ IPM43_01090 PF04012 PspA/IM30 family IPM43_01095 PF00696 Amino acid kinase family IPM43_01095 PF01472 PUA domain IPM43_01100 PF09269 Domain of unknown function (DUF1967) IPM43_01100 PF01018 GTP1/OBG IPM43_01100 PF01926 50S ribosome-binding GTPase IPM43_01105 PF01966 HD domain IPM43_01105 PF13286 Phosphohydrolase-associated domain IPM43_01110 PF01016 Ribosomal L27 protein IPM43_01115 PF00829 Ribosomal prokaryotic L21 protein IPM43_01120 PF10150 Ribonuclease E/G family IPM43_01135 PF01098 Cell cycle protein IPM43_01140 PF03717 Penicillin-binding Protein dimerisation domain IPM43_01140 PF00905 Penicillin binding protein transpeptidase domain IPM43_01150 PF04085 rod shape-determining protein MreC IPM43_01160 PF00334 Nucleoside diphosphate kinase IPM43_01165 PF08245 Mur ligase middle domain IPM43_01165 PF02875 Mur ligase family, glutamate ligase domain IPM43_01170 PF10431 C-terminal, D2-small domain, of ClpB protein IPM43_01170 PF07724 AAA domain (Cdc48 subfamily) IPM43_01170 PF06689 ClpX C4-type zinc finger IPM43_01175 PF00574 Clp protease IPM43_01180 PF05697 Bacterial trigger factor protein (TF) IPM43_01180 PF05698 Bacterial trigger factor protein (TF) C-terminus IPM43_01180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IPM43_01190 PF00196 Bacterial regulatory proteins, luxR family IPM43_01190 PF00072 Response regulator receiver domain IPM43_01195 PF13492 GAF domain IPM43_01195 PF07730 Histidine kinase IPM43_01195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_01195 PF13185 GAF domain IPM43_01200 PF07731 Multicopper oxidase IPM43_01200 PF07732 Multicopper oxidase IPM43_01205 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IPM43_01205 PF06974 Protein of unknown function (DUF1298) IPM43_01215 PF01547 Bacterial extracellular solute-binding protein IPM43_01225 PF03976 Polyphosphate kinase 2 (PPK2) IPM43_01235 PF01569 PAP2 superfamily IPM43_01240 PF00781 Diacylglycerol kinase catalytic domain IPM43_01245 PF03976 Polyphosphate kinase 2 (PPK2) IPM43_01255 PF01594 AI-2E family transporter IPM43_01275 PF00255 Glutathione peroxidase IPM43_01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_01315 PF00672 HAMP domain IPM43_01315 PF00512 His Kinase A (phospho-acceptor) domain IPM43_01320 PF00486 Transcriptional regulatory protein, C terminal IPM43_01320 PF00072 Response regulator receiver domain IPM43_01330 PF00378 Enoyl-CoA hydratase/isomerase IPM43_01335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_01335 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_01335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_01340 PF12697 Alpha/beta hydrolase family IPM43_01350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_01350 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_01350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_01365 PF01740 STAS domain IPM43_01375 PF13581 Histidine kinase-like ATPase domain IPM43_01375 PF07228 Stage II sporulation protein E (SpoIIE) IPM43_01375 PF13466 STAS domain IPM43_01375 PF08448 PAS fold IPM43_01385 PF13298 DNA polymerase Ligase (LigD) IPM43_01385 PF01068 ATP dependent DNA ligase domain IPM43_01385 PF04679 ATP dependent DNA ligase C terminal region IPM43_01390 PF02735 Ku70/Ku80 beta-barrel domain IPM43_01395 PF04679 ATP dependent DNA ligase C terminal region IPM43_01395 PF13298 DNA polymerase Ligase (LigD) IPM43_01395 PF01068 ATP dependent DNA ligase domain IPM43_01410 PF00296 Luciferase-like monooxygenase IPM43_01415 PF00916 Sulfate permease family IPM43_01415 PF01740 STAS domain IPM43_01430 PF04542 Sigma-70 region 2 IPM43_01430 PF04545 Sigma-70, region 4 IPM43_01430 PF04539 Sigma-70 region 3 IPM43_01440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPM43_01440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPM43_01450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_01450 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_01450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_01455 PF00205 Thiamine pyrophosphate enzyme, central domain IPM43_01455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPM43_01455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IPM43_01465 PF00210 Ferritin-like domain IPM43_01475 PF00005 ABC transporter IPM43_01480 PF00950 ABC 3 transport family IPM43_01490 PF00067 Cytochrome P450 IPM43_01495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IPM43_01495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IPM43_01505 PF00120 Glutamine synthetase, catalytic domain IPM43_01510 PF02559 CarD-like/TRCF domain IPM43_01535 PF00582 Universal stress protein family IPM43_01545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IPM43_01545 PF18029 Glyoxalase-like domain IPM43_01555 PF04075 F420H(2)-dependent quinone reductase IPM43_01560 PF00743 Flavin-binding monooxygenase-like IPM43_01565 PF02834 LigT like Phosphoesterase IPM43_01570 PF02464 Competence-damaged protein IPM43_01570 PF00994 Probable molybdopterin binding domain IPM43_01570 PF18146 Damage-inducible protein CinA KH domain IPM43_01575 PF01066 CDP-alcohol phosphatidyltransferase IPM43_01580 PF04055 Radical SAM superfamily IPM43_01580 PF18693 TRAM domain IPM43_01580 PF00919 Uncharacterized protein family UPF0004 IPM43_01590 PF09397 Ftsk gamma domain IPM43_01590 PF17854 FtsK alpha domain IPM43_01590 PF01580 FtsK/SpoIIIE family IPM43_01595 PF17770 Ribonuclease J C-terminal domain IPM43_01595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IPM43_01595 PF00753 Metallo-beta-lactamase superfamily IPM43_01600 PF00701 Dihydrodipicolinate synthetase family IPM43_01610 PF07478 D-ala D-ala ligase C-terminus IPM43_01610 PF01820 D-ala D-ala ligase N-terminus IPM43_01645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IPM43_01645 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_01650 PF04898 Glutamate synthase central domain IPM43_01650 PF00310 Glutamine amidotransferases class-II IPM43_01650 PF01493 GXGXG motif IPM43_01650 PF01645 Conserved region in glutamate synthase IPM43_01660 PF00378 Enoyl-CoA hydratase/isomerase IPM43_01665 PF07702 UTRA domain IPM43_01665 PF00392 Bacterial regulatory proteins, gntR family IPM43_01670 PF00330 Aconitase family (aconitate hydratase) IPM43_01670 PF00694 Aconitase C-terminal domain IPM43_01675 PF00881 Nitroreductase family IPM43_01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPM43_01685 PF03466 LysR substrate binding domain IPM43_01690 PF01039 Carboxyl transferase domain IPM43_01695 PF00285 Citrate synthase, C-terminal domain IPM43_01705 PF13860 FlgD Ig-like domain IPM43_01705 PF05922 Peptidase inhibitor I9 IPM43_01705 PF00082 Subtilase family IPM43_01705 PF02225 PA domain IPM43_01710 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_01710 PF00107 Zinc-binding dehydrogenase IPM43_01715 PF00180 Isocitrate/isopropylmalate dehydrogenase IPM43_01720 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_01720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_01720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_01735 PF00248 Aldo/keto reductase family IPM43_01860 PF04860 Phage portal protein IPM43_01905 PF00145 C-5 cytosine-specific DNA methylase IPM43_01980 PF04055 Radical SAM superfamily IPM43_01995 PF04452 RNA methyltransferase IPM43_02000 PF01556 DnaJ C terminal domain IPM43_02000 PF00684 DnaJ central domain IPM43_02000 PF00226 DnaJ domain IPM43_02005 PF01628 HrcA protein C terminal domain IPM43_02010 PF00815 Histidinol dehydrogenase IPM43_02020 PF00679 Elongation factor G C-terminus IPM43_02020 PF00009 Elongation factor Tu GTP binding domain IPM43_02020 PF06421 GTP-binding protein LepA C-terminus IPM43_02025 PF01649 Ribosomal protein S20 IPM43_02050 PF00085 Thioredoxin IPM43_02065 PF00296 Luciferase-like monooxygenase IPM43_02075 PF14535 AMP-binding enzyme C-terminal domain IPM43_02075 PF00501 AMP-binding enzyme IPM43_02080 PF09334 tRNA synthetases class I (M) IPM43_02080 PF13603 Leucyl-tRNA synthetase, Domain 2 IPM43_02080 PF08264 Anticodon-binding domain of tRNA IPM43_02100 PF01757 Acyltransferase family IPM43_02125 PF00005 ABC transporter IPM43_02135 PF10415 Fumarase C C-terminus IPM43_02135 PF00206 Lyase IPM43_02155 PF01370 NAD dependent epimerase/dehydratase family IPM43_02160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IPM43_02160 PF00205 Thiamine pyrophosphate enzyme, central domain IPM43_02160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPM43_02180 PF01467 Cytidylyltransferase-like IPM43_02185 PF04539 Sigma-70 region 3 IPM43_02185 PF04545 Sigma-70, region 4 IPM43_02185 PF00140 Sigma-70 factor, region 1.2 IPM43_02185 PF04542 Sigma-70 region 2 IPM43_02190 PF01474 Class-II DAHP synthetase family IPM43_02205 PF00108 Thiolase, N-terminal domain IPM43_02205 PF02803 Thiolase, C-terminal domain IPM43_02210 PF00067 Cytochrome P450 IPM43_02215 PF00265 Thymidine kinase IPM43_02225 PF09587 Bacterial capsule synthesis protein PGA_cap IPM43_02230 PF04679 ATP dependent DNA ligase C terminal region IPM43_02230 PF01068 ATP dependent DNA ligase domain IPM43_02230 PF04675 DNA ligase N terminus IPM43_02240 PF08471 Class II vitamin B12-dependent ribonucleotide reductase IPM43_02240 PF02867 Ribonucleotide reductase, barrel domain IPM43_02245 PF03477 ATP cone domain IPM43_02255 PF01726 LexA DNA binding domain IPM43_02255 PF00717 Peptidase S24-like IPM43_02265 PF00155 Aminotransferase class I and II IPM43_02270 PF01926 50S ribosome-binding GTPase IPM43_02270 PF16360 GTP-binding GTPase Middle Region IPM43_02270 PF13167 GTP-binding GTPase N-terminal IPM43_02275 PF01678 Diaminopimelate epimerase IPM43_02285 PF00919 Uncharacterized protein family UPF0004 IPM43_02285 PF04055 Radical SAM superfamily IPM43_02290 PF00140 Sigma-70 factor, region 1.2 IPM43_02290 PF03979 Sigma-70 factor, region 1.1 IPM43_02290 PF04542 Sigma-70 region 2 IPM43_02290 PF04539 Sigma-70 region 3 IPM43_02290 PF04545 Sigma-70, region 4 IPM43_02295 PF08275 DNA primase catalytic core, N-terminal domain IPM43_02295 PF01807 CHC2 zinc finger IPM43_02295 PF10410 DnaB-helicase binding domain of primase IPM43_02300 PF03741 Integral membrane protein TerC family IPM43_02305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IPM43_02305 PF00391 PEP-utilising enzyme, mobile domain IPM43_02305 PF02896 PEP-utilising enzyme, TIM barrel domain IPM43_02315 PF01571 Aminomethyltransferase folate-binding domain IPM43_02320 PF04715 Anthranilate synthase component I, N terminal region IPM43_02320 PF00425 chorismate binding enzyme IPM43_02325 PF01502 Phosphoribosyl-AMP cyclohydrolase IPM43_02330 PF00166 Chaperonin 10 Kd subunit IPM43_02340 PF00248 Aldo/keto reductase family IPM43_02345 PF02574 Homocysteine S-methyltransferase IPM43_02350 PF00977 Histidine biosynthesis protein IPM43_02355 PF00977 Histidine biosynthesis protein IPM43_02360 PF00117 Glutamine amidotransferase class-I IPM43_02365 PF00475 Imidazoleglycerol-phosphate dehydratase IPM43_02370 PF00155 Aminotransferase class I and II IPM43_02375 PF10576 Iron-sulfur binding domain of endonuclease III IPM43_02375 PF00633 Helix-hairpin-helix motif IPM43_02375 PF00730 HhH-GPD superfamily base excision DNA repair protein IPM43_02380 PF00583 Acetyltransferase (GNAT) family IPM43_02390 PF04055 Radical SAM superfamily IPM43_02395 PF01145 SPFH domain / Band 7 family IPM43_02420 PF00005 ABC transporter IPM43_02450 PF00684 DnaJ central domain IPM43_02450 PF01556 DnaJ C terminal domain IPM43_02450 PF00226 DnaJ domain IPM43_02455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IPM43_02460 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_02465 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_02470 PF08402 TOBE domain IPM43_02470 PF00005 ABC transporter IPM43_02480 PF00202 Aminotransferase class-III IPM43_02485 PF00171 Aldehyde dehydrogenase family IPM43_02490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IPM43_02490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IPM43_02500 PF01180 Dihydroorotate dehydrogenase IPM43_02505 PF10371 Domain of unknown function IPM43_02505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPM43_02505 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IPM43_02505 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IPM43_02505 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IPM43_02510 PF00067 Cytochrome P450 IPM43_02520 PF02875 Mur ligase family, glutamate ligase domain IPM43_02520 PF01225 Mur ligase family, catalytic domain IPM43_02520 PF08245 Mur ligase middle domain IPM43_02530 PF00440 Bacterial regulatory proteins, tetR family IPM43_02540 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_02545 PF00005 ABC transporter IPM43_02570 PF13193 AMP-binding enzyme C-terminal domain IPM43_02570 PF00501 AMP-binding enzyme IPM43_02580 PF00701 Dihydrodipicolinate synthetase family IPM43_02585 PF08534 Redoxin IPM43_02590 PF01113 Dihydrodipicolinate reductase, N-terminus IPM43_02590 PF05173 Dihydrodipicolinate reductase, C-terminus IPM43_02600 PF00675 Insulinase (Peptidase family M16) IPM43_02600 PF05193 Peptidase M16 inactive domain IPM43_02605 PF00575 S1 RNA binding domain IPM43_02605 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IPM43_02605 PF00013 KH domain IPM43_02605 PF01138 3' exoribonuclease family, domain 1 IPM43_02610 PF00312 Ribosomal protein S15 IPM43_02615 PF00005 ABC transporter IPM43_02620 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_02625 PF09084 NMT1/THI5 like IPM43_02630 PF06574 FAD synthetase IPM43_02630 PF01687 Riboflavin kinase IPM43_02635 PF01509 TruB family pseudouridylate synthase (N terminal domain) IPM43_02635 PF16198 tRNA pseudouridylate synthase B C-terminal domain IPM43_02635 PF09142 tRNA Pseudouridine synthase II, C terminal IPM43_02640 PF02033 Ribosome-binding factor A IPM43_02645 PF00009 Elongation factor Tu GTP binding domain IPM43_02645 PF11987 Translation-initiation factor 2 IPM43_02645 PF04760 Translation initiation factor IF-2, N-terminal region IPM43_02655 PF08529 NusA N-terminal domain IPM43_02655 PF00575 S1 RNA binding domain IPM43_02655 PF13184 NusA-like KH domain IPM43_02660 PF17384 RimP C-terminal SH3 domain IPM43_02660 PF02576 RimP N-terminal domain IPM43_02665 PF04073 Aminoacyl-tRNA editing domain IPM43_02665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM43_02665 PF03129 Anticodon binding domain IPM43_02685 PF04551 GcpE protein IPM43_02690 PF02163 Peptidase family M50 IPM43_02690 PF17820 PDZ domain IPM43_02695 PF13288 DXP reductoisomerase C-terminal domain IPM43_02695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IPM43_02695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IPM43_02705 PF01765 Ribosome recycling factor IPM43_02710 PF00696 Amino acid kinase family IPM43_02715 PF00889 Elongation factor TS IPM43_02720 PF00318 Ribosomal protein S2 IPM43_02730 PF04545 Sigma-70, region 4 IPM43_02730 PF04539 Sigma-70 region 3 IPM43_02730 PF04542 Sigma-70 region 2 IPM43_02735 PF02899 Phage integrase, N-terminal SAM-like domain IPM43_02735 PF00589 Phage integrase family IPM43_02740 PF17782 DprA winged helix domain IPM43_02740 PF02481 DNA recombination-mediator protein A IPM43_02745 PF01078 Magnesium chelatase, subunit ChlI IPM43_02745 PF13335 Magnesium chelatase, subunit ChlI C-terminal IPM43_02755 PF00574 Clp protease IPM43_02760 PF00484 Carbonic anhydrase IPM43_02800 PF01725 Ham1 family IPM43_02805 PF03725 3' exoribonuclease family, domain 2 IPM43_02805 PF01138 3' exoribonuclease family, domain 1 IPM43_02810 PF01177 Asp/Glu/Hydantoin racemase IPM43_02825 PF00291 Pyridoxal-phosphate dependent enzyme IPM43_02835 PF01668 SmpB protein IPM43_02840 PF00009 Elongation factor Tu GTP binding domain IPM43_02840 PF16658 Class II release factor RF3, C-terminal domain IPM43_02845 PF00563 EAL domain IPM43_02845 PF00990 Diguanylate cyclase, GGDEF domain IPM43_02845 PF03707 Bacterial signalling protein N terminal repeat IPM43_02845 PF13188 PAS domain IPM43_02870 PF00196 Bacterial regulatory proteins, luxR family IPM43_02880 PF00561 alpha/beta hydrolase fold IPM43_02920 PF03167 Uracil DNA glycosylase superfamily IPM43_02930 PF01850 PIN domain IPM43_02935 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IPM43_02950 PF00561 alpha/beta hydrolase fold IPM43_02955 PF04324 BFD-like [2Fe-2S] binding domain IPM43_02955 PF01266 FAD dependent oxidoreductase IPM43_02965 PF04960 Glutaminase IPM43_02980 PF04851 Type III restriction enzyme, res subunit IPM43_02985 PF07669 Eco57I restriction-modification methylase IPM43_02990 PF02384 N-6 DNA Methylase IPM43_03000 PF00916 Sulfate permease family IPM43_03000 PF01740 STAS domain IPM43_03035 PF05384 Sensor protein DegS IPM43_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_03035 PF07730 Histidine kinase IPM43_03040 PF00072 Response regulator receiver domain IPM43_03040 PF00196 Bacterial regulatory proteins, luxR family IPM43_03045 PF01451 Low molecular weight phosphotyrosine protein phosphatase IPM43_03065 PF00884 Sulfatase IPM43_03065 PF16385 Domain of unknown function IPM43_03070 PF04405 Domain of Unknown function (DUF542) IPM43_03070 PF01814 Hemerythrin HHE cation binding domain IPM43_03085 PF12950 TaqI-like C-terminal specificity domain IPM43_03085 PF07669 Eco57I restriction-modification methylase IPM43_03105 PF00689 Cation transporting ATPase, C-terminus IPM43_03105 PF00690 Cation transporter/ATPase, N-terminus IPM43_03110 PF00144 Beta-lactamase IPM43_03110 PF11954 Domain of unknown function (DUF3471) IPM43_03155 PF03606 C4-dicarboxylate anaerobic carrier IPM43_03160 PF01022 Bacterial regulatory protein, arsR family IPM43_03175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IPM43_03175 PF02817 e3 binding domain IPM43_03175 PF00364 Biotin-requiring enzyme IPM43_03180 PF02780 Transketolase, C-terminal domain IPM43_03180 PF02779 Transketolase, pyrimidine binding domain IPM43_03185 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal IPM43_03185 PF00676 Dehydrogenase E1 component IPM43_03200 PF00171 Aldehyde dehydrogenase family IPM43_03205 PF00296 Luciferase-like monooxygenase IPM43_03225 PF03459 TOBE domain IPM43_03225 PF00005 ABC transporter IPM43_03230 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_03245 PF00005 ABC transporter IPM43_03245 PF00664 ABC transporter transmembrane region IPM43_03250 PF00664 ABC transporter transmembrane region IPM43_03250 PF00005 ABC transporter IPM43_03255 PF04264 YceI-like domain IPM43_03260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IPM43_03270 PF16653 Saccharopine dehydrogenase C-terminal domain IPM43_03270 PF03435 Saccharopine dehydrogenase NADP binding domain IPM43_03285 PF00664 ABC transporter transmembrane region IPM43_03285 PF00005 ABC transporter IPM43_03290 PF00005 ABC transporter IPM43_03290 PF00664 ABC transporter transmembrane region IPM43_03300 PF01593 Flavin containing amine oxidoreductase IPM43_03305 PF03060 Nitronate monooxygenase IPM43_03310 PF00689 Cation transporting ATPase, C-terminus IPM43_03310 PF00690 Cation transporter/ATPase, N-terminus IPM43_03315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IPM43_03320 PF00953 Glycosyl transferase family 4 IPM43_03320 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IPM43_03335 PF01804 Penicillin amidase IPM43_03340 PF01212 Beta-eliminating lyase IPM43_03350 PF01434 Peptidase family M41 IPM43_03350 PF00004 ATPase family associated with various cellular activities (AAA) IPM43_03350 PF17862 AAA+ lid domain IPM43_03350 PF06480 FtsH Extracellular IPM43_03360 PF00378 Enoyl-CoA hydratase/isomerase IPM43_03365 PF00551 Formyl transferase IPM43_03365 PF01842 ACT domain IPM43_03370 PF00378 Enoyl-CoA hydratase/isomerase IPM43_03375 PF18075 FtsX extracellular domain IPM43_03375 PF02687 FtsX-like permease family IPM43_03380 PF00005 ABC transporter IPM43_03385 PF00472 RF-1 domain IPM43_03385 PF03462 PCRF domain IPM43_03390 PF01043 SecA preprotein cross-linking domain IPM43_03390 PF02810 SEC-C motif IPM43_03390 PF07516 SecA Wing and Scaffold domain IPM43_03390 PF07517 SecA DEAD-like domain IPM43_03410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IPM43_03410 PF05221 S-adenosyl-L-homocysteine hydrolase IPM43_03420 PF03966 Trm112p-like protein IPM43_03425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IPM43_03425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IPM43_03425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IPM43_03425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IPM43_03445 PF06480 FtsH Extracellular IPM43_03445 PF00004 ATPase family associated with various cellular activities (AAA) IPM43_03445 PF01434 Peptidase family M41 IPM43_03445 PF17862 AAA+ lid domain IPM43_03460 PF00535 Glycosyl transferase family 2 IPM43_03460 PF00534 Glycosyl transferases group 1 IPM43_03475 PF16363 GDP-mannose 4,6 dehydratase IPM43_03480 PF13439 Glycosyltransferase Family 4 IPM43_03485 PF01933 Uncharacterised protein family UPF0052 IPM43_03490 PF00881 Nitroreductase family IPM43_03490 PF01996 F420-0:Gamma-glutamyl ligase IPM43_03495 PF16363 GDP-mannose 4,6 dehydratase IPM43_03500 PF00483 Nucleotidyl transferase IPM43_03510 PF13579 Glycosyl transferase 4-like domain IPM43_03515 PF00534 Glycosyl transferases group 1 IPM43_03515 PF13439 Glycosyltransferase Family 4 IPM43_03530 PF01370 NAD dependent epimerase/dehydratase family IPM43_03545 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IPM43_03545 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IPM43_03555 PF02585 GlcNAc-PI de-N-acetylase IPM43_03565 PF00216 Bacterial DNA-binding protein IPM43_03570 PF01230 HIT domain IPM43_03575 PF13638 PIN domain IPM43_03575 PF02562 PhoH-like protein IPM43_03580 PF04851 Type III restriction enzyme, res subunit IPM43_03580 PF13307 Helicase C-terminal domain IPM43_03580 PF00929 Exonuclease IPM43_03590 PF13280 WYL domain IPM43_03595 PF02310 B12 binding domain IPM43_03595 PF01642 Methylmalonyl-CoA mutase IPM43_03600 PF16655 PhoD-like phosphatase, N-terminal domain IPM43_03600 PF09423 PhoD-like phosphatase IPM43_03605 PF00342 Phosphoglucose isomerase IPM43_03610 PF02310 B12 binding domain IPM43_03610 PF01642 Methylmalonyl-CoA mutase IPM43_03615 PF00892 EamA-like transporter family IPM43_03635 PF02653 Branched-chain amino acid transport system / permease component IPM43_03635 PF11862 Domain of unknown function (DUF3382) IPM43_03640 PF02653 Branched-chain amino acid transport system / permease component IPM43_03645 PF00005 ABC transporter IPM43_03650 PF00005 ABC transporter IPM43_03650 PF12399 Branched-chain amino acid ATP-binding cassette transporter IPM43_03660 PF02541 Ppx/GppA phosphatase family IPM43_03670 PF00535 Glycosyl transferase family 2 IPM43_03685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPM43_03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_03700 PF02080 TrkA-C domain IPM43_03700 PF02254 TrkA-N domain IPM43_03705 PF02080 TrkA-C domain IPM43_03705 PF02254 TrkA-N domain IPM43_03710 PF13520 Amino acid permease IPM43_03715 PF08338 Domain of unknown function (DUF1731) IPM43_03715 PF01370 NAD dependent epimerase/dehydratase family IPM43_03720 PF10604 Polyketide cyclase / dehydrase and lipid transport IPM43_03725 PF01960 ArgJ family IPM43_03730 PF00106 short chain dehydrogenase IPM43_03740 PF00075 RNase H IPM43_03745 PF00456 Transketolase, thiamine diphosphate binding domain IPM43_03745 PF17831 Pyruvate dehydrogenase E1 component middle domain IPM43_03780 PF13439 Glycosyltransferase Family 4 IPM43_03780 PF00534 Glycosyl transferases group 1 IPM43_03795 PF00005 ABC transporter IPM43_03795 PF14524 Wzt C-terminal domain IPM43_03805 PF02397 Bacterial sugar transferase IPM43_03820 PF00005 ABC transporter IPM43_03835 PF12680 SnoaL-like domain IPM43_03835 PF04542 Sigma-70 region 2 IPM43_03835 PF08281 Sigma-70, region 4 IPM43_03855 PF01757 Acyltransferase family IPM43_03860 PF16363 GDP-mannose 4,6 dehydratase IPM43_03875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_03875 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_03875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_03890 PF00753 Metallo-beta-lactamase superfamily IPM43_03900 PF00378 Enoyl-CoA hydratase/isomerase IPM43_03910 PF00005 ABC transporter IPM43_03915 PF00266 Aminotransferase class-V IPM43_03920 PF01592 NifU-like N terminal domain IPM43_03925 PF04073 Aminoacyl-tRNA editing domain IPM43_03925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM43_03925 PF03129 Anticodon binding domain IPM43_03935 PF00005 ABC transporter IPM43_03940 PF00355 Rieske [2Fe-2S] domain IPM43_03945 PF01458 Uncharacterized protein family (UPF0051) IPM43_03955 PF01458 Uncharacterized protein family (UPF0051) IPM43_03975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IPM43_03975 PF00326 Prolyl oligopeptidase family IPM43_03985 PF01613 Flavin reductase like domain IPM43_03990 PF12706 Beta-lactamase superfamily domain IPM43_03995 PF12697 Alpha/beta hydrolase family IPM43_04015 PF01575 MaoC like domain IPM43_04025 PF03641 Possible lysine decarboxylase IPM43_04030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_04030 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_04030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_04040 PF03328 HpcH/HpaI aldolase/citrate lyase family IPM43_04045 PF03328 HpcH/HpaI aldolase/citrate lyase family IPM43_04050 PF01738 Dienelactone hydrolase family IPM43_04055 PF00202 Aminotransferase class-III IPM43_04060 PF00080 Copper/zinc superoxide dismutase (SODC) IPM43_04065 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IPM43_04065 PF00391 PEP-utilising enzyme, mobile domain IPM43_04080 PF09084 NMT1/THI5 like IPM43_04090 PF00005 ABC transporter IPM43_04095 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_04105 PF00171 Aldehyde dehydrogenase family IPM43_04110 PF01979 Amidohydrolase family IPM43_04115 PF00795 Carbon-nitrogen hydrolase IPM43_04120 PF00155 Aminotransferase class I and II IPM43_04120 PF00392 Bacterial regulatory proteins, gntR family IPM43_04140 PF08482 ATP-dependent helicase C-terminal IPM43_04140 PF00271 Helicase conserved C-terminal domain IPM43_04140 PF04408 Helicase associated domain (HA2) IPM43_04140 PF00270 DEAD/DEAH box helicase IPM43_04145 PF05683 Fumarase C-terminus IPM43_04145 PF05681 Fumarate hydratase (Fumerase) IPM43_04150 PF00457 Glycosyl hydrolases family 11 IPM43_04150 PF01522 Polysaccharide deacetylase IPM43_04150 PF03422 Carbohydrate binding module (family 6) IPM43_04165 PF12848 ABC transporter IPM43_04165 PF00005 ABC transporter IPM43_04165 PF16326 ABC transporter C-terminal domain IPM43_04180 PF03176 MMPL family IPM43_04185 PF01741 Large-conductance mechanosensitive channel, MscL IPM43_04200 PF01425 Amidase IPM43_04220 PF00296 Luciferase-like monooxygenase IPM43_04225 PF00850 Histone deacetylase domain IPM43_04235 PF00067 Cytochrome P450 IPM43_04250 PF00378 Enoyl-CoA hydratase/isomerase IPM43_04255 PF01144 Coenzyme A transferase IPM43_04265 PF03060 Nitronate monooxygenase IPM43_04270 PF01575 MaoC like domain IPM43_04285 PF00355 Rieske [2Fe-2S] domain IPM43_04285 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IPM43_04290 PF13193 AMP-binding enzyme C-terminal domain IPM43_04290 PF00501 AMP-binding enzyme IPM43_04295 PF00067 Cytochrome P450 IPM43_04300 PF02515 CoA-transferase family III IPM43_04305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_04305 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_04305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_04310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IPM43_04325 PF02803 Thiolase, C-terminal domain IPM43_04325 PF00108 Thiolase, N-terminal domain IPM43_04330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IPM43_04330 PF00384 Molybdopterin oxidoreductase IPM43_04330 PF01568 Molydopterin dinucleotide binding domain IPM43_04340 PF01636 Phosphotransferase enzyme family IPM43_04355 PF00857 Isochorismatase family IPM43_04375 PF00106 short chain dehydrogenase IPM43_04400 PF02515 CoA-transferase family III IPM43_04405 PF13193 AMP-binding enzyme C-terminal domain IPM43_04405 PF00501 AMP-binding enzyme IPM43_04410 PF00378 Enoyl-CoA hydratase/isomerase IPM43_04415 PF00296 Luciferase-like monooxygenase IPM43_04420 PF00814 Glycoprotease family IPM43_04445 PF12399 Branched-chain amino acid ATP-binding cassette transporter IPM43_04445 PF00005 ABC transporter IPM43_04450 PF00005 ABC transporter IPM43_04465 PF00296 Luciferase-like monooxygenase IPM43_04475 PF00282 Pyridoxal-dependent decarboxylase conserved domain IPM43_04485 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_04485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_04485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_04490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_04490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_04505 PF13193 AMP-binding enzyme C-terminal domain IPM43_04505 PF00501 AMP-binding enzyme IPM43_04525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_04525 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_04525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_04530 PF00289 Biotin carboxylase, N-terminal domain IPM43_04530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPM43_04530 PF00364 Biotin-requiring enzyme IPM43_04530 PF02785 Biotin carboxylase C-terminal domain IPM43_04535 PF01039 Carboxyl transferase domain IPM43_04540 PF00440 Bacterial regulatory proteins, tetR family IPM43_04565 PF00749 tRNA synthetases class I (E and Q), catalytic domain IPM43_04570 PF05088 Bacterial NAD-glutamate dehydrogenase IPM43_04575 PF00378 Enoyl-CoA hydratase/isomerase IPM43_04585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_04585 PF12806 Acetyl-CoA dehydrogenase C-terminal like IPM43_04585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_04585 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_04590 PF00550 Phosphopantetheine attachment site IPM43_04595 PF02817 e3 binding domain IPM43_04595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IPM43_04595 PF00364 Biotin-requiring enzyme IPM43_04600 PF00364 Biotin-requiring enzyme IPM43_04600 PF02780 Transketolase, C-terminal domain IPM43_04600 PF02779 Transketolase, pyrimidine binding domain IPM43_04605 PF00676 Dehydrogenase E1 component IPM43_04610 PF00501 AMP-binding enzyme IPM43_04610 PF13193 AMP-binding enzyme C-terminal domain IPM43_04625 PF08502 LeuA allosteric (dimerisation) domain IPM43_04625 PF00682 HMGL-like IPM43_04630 PF00491 Arginase family IPM43_04635 PF01063 Amino-transferase class IV IPM43_04640 PF00180 Isocitrate/isopropylmalate dehydrogenase IPM43_04645 PF01272 Transcription elongation factor, GreA/GreB, C-term IPM43_04645 PF03449 Transcription elongation factor, N-terminal IPM43_04650 PF00561 alpha/beta hydrolase fold IPM43_04655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IPM43_04660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IPM43_04660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IPM43_04665 PF02910 Fumarate reductase flavoprotein C-term IPM43_04665 PF00890 FAD binding domain IPM43_04670 PF02445 Quinolinate synthetase A protein IPM43_04685 PF00330 Aconitase family (aconitate hydratase) IPM43_04690 PF00694 Aconitase C-terminal domain IPM43_04715 PF12704 MacB-like periplasmic core domain IPM43_04715 PF02687 FtsX-like permease family IPM43_04715 PF00005 ABC transporter IPM43_04730 PF00271 Helicase conserved C-terminal domain IPM43_04730 PF00270 DEAD/DEAH box helicase IPM43_04735 PF01471 Putative peptidoglycan binding domain IPM43_04735 PF08238 Sel1 repeat IPM43_04740 PF13193 AMP-binding enzyme C-terminal domain IPM43_04740 PF00501 AMP-binding enzyme IPM43_04750 PF00144 Beta-lactamase IPM43_04755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IPM43_04755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IPM43_04755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IPM43_04780 PF03600 Citrate transporter IPM43_04780 PF02080 TrkA-C domain IPM43_04790 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IPM43_04795 PF00067 Cytochrome P450 IPM43_04800 PF00085 Thioredoxin IPM43_04805 PF08502 LeuA allosteric (dimerisation) domain IPM43_04805 PF00682 HMGL-like IPM43_04820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IPM43_04825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IPM43_04825 PF01842 ACT domain IPM43_04825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPM43_04835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IPM43_04835 PF13378 Enolase C-terminal domain-like IPM43_04850 PF07690 Major Facilitator Superfamily IPM43_04855 PF00106 short chain dehydrogenase IPM43_04860 PF00069 Protein kinase domain IPM43_04860 PF03793 PASTA domain IPM43_04870 PF00533 BRCA1 C Terminus (BRCT) domain IPM43_04870 PF01653 NAD-dependent DNA ligase adenylation domain IPM43_04870 PF03120 NAD-dependent DNA ligase OB-fold domain IPM43_04870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IPM43_04870 PF12826 Helix-hairpin-helix motif IPM43_04890 PF00266 Aminotransferase class-V IPM43_04895 PF13649 Methyltransferase domain IPM43_04900 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IPM43_04900 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IPM43_04920 PF00128 Alpha amylase, catalytic domain IPM43_04920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IPM43_04920 PF02806 Alpha amylase, C-terminal all-beta domain IPM43_04925 PF00534 Glycosyl transferases group 1 IPM43_04925 PF13439 Glycosyltransferase Family 4 IPM43_04930 PF00343 Carbohydrate phosphorylase IPM43_04930 PF11897 Protein of unknown function (DUF3417) IPM43_04935 PF00378 Enoyl-CoA hydratase/isomerase IPM43_04945 PF01106 NifU-like domain IPM43_04955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IPM43_04960 PF00083 Sugar (and other) transporter IPM43_04960 PF07690 Major Facilitator Superfamily IPM43_04980 PF00561 alpha/beta hydrolase fold IPM43_04985 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IPM43_04990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IPM43_04990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IPM43_04990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IPM43_04995 PF01370 NAD dependent epimerase/dehydratase family IPM43_05010 PF00106 short chain dehydrogenase IPM43_05015 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IPM43_05020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPM43_05020 PF02874 ATP synthase alpha/beta family, beta-barrel domain IPM43_05025 PF00231 ATP synthase IPM43_05030 PF00306 ATP synthase alpha/beta chain, C terminal domain IPM43_05030 PF02874 ATP synthase alpha/beta family, beta-barrel domain IPM43_05030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPM43_05035 PF00213 ATP synthase delta (OSCP) subunit IPM43_05050 PF00137 ATP synthase subunit C IPM43_05055 PF00119 ATP synthase A chain IPM43_05070 PF00953 Glycosyl transferase family 4 IPM43_05075 PF00464 Serine hydroxymethyltransferase IPM43_05080 PF02502 Ribose/Galactose Isomerase IPM43_05090 PF01156 Inosine-uridine preferring nucleoside hydrolase IPM43_05100 PF00107 Zinc-binding dehydrogenase IPM43_05100 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_05105 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IPM43_05105 PF00326 Prolyl oligopeptidase family IPM43_05115 PF17827 PrmC N-terminal domain IPM43_05115 PF05175 Methyltransferase small domain IPM43_05120 PF00472 RF-1 domain IPM43_05120 PF03462 PCRF domain IPM43_05145 PF01197 Ribosomal protein L31 IPM43_05150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPM43_05150 PF07498 Rho termination factor, N-terminal domain IPM43_05150 PF07497 Rho termination factor, RNA-binding domain IPM43_05150 PF07498 Rho termination factor, N-terminal domain IPM43_05150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPM43_05150 PF07497 Rho termination factor, RNA-binding domain IPM43_05155 PF00291 Pyridoxal-phosphate dependent enzyme IPM43_05155 PF14821 Threonine synthase N terminus IPM43_05160 PF00742 Homoserine dehydrogenase IPM43_05160 PF01842 ACT domain IPM43_05160 PF03447 Homoserine dehydrogenase, NAD binding domain IPM43_05175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IPM43_05175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IPM43_05180 PF03485 Arginyl tRNA synthetase N terminal domain IPM43_05180 PF00750 tRNA synthetases class I (R) IPM43_05180 PF05746 DALR anticodon binding domain IPM43_05200 PF00665 Integrase core domain IPM43_05205 PF00196 Bacterial regulatory proteins, luxR family IPM43_05230 PF18019 HD domain IPM43_05230 PF00270 DEAD/DEAH box helicase IPM43_05230 PF00271 Helicase conserved C-terminal domain IPM43_05235 PF09704 CRISPR-associated protein (Cas_Cas5) IPM43_05255 PF01867 CRISPR associated protein Cas1 IPM43_05290 PF07859 alpha/beta hydrolase fold IPM43_05300 PF01494 FAD binding domain IPM43_05305 PF01022 Bacterial regulatory protein, arsR family IPM43_05320 PF00109 Beta-ketoacyl synthase, N-terminal domain IPM43_05320 PF00698 Acyl transferase domain IPM43_05320 PF16197 Ketoacyl-synthetase C-terminal extension IPM43_05320 PF00668 Condensation domain IPM43_05320 PF02801 Beta-ketoacyl synthase, C-terminal domain IPM43_05320 PF00550 Phosphopantetheine attachment site IPM43_05325 PF00550 Phosphopantetheine attachment site IPM43_05325 PF00668 Condensation domain IPM43_05325 PF00668 Condensation domain IPM43_05325 PF00501 AMP-binding enzyme IPM43_05325 PF13193 AMP-binding enzyme C-terminal domain IPM43_05325 PF00501 AMP-binding enzyme IPM43_05325 PF00975 Thioesterase domain IPM43_05325 PF00550 Phosphopantetheine attachment site IPM43_05325 PF00975 Thioesterase domain IPM43_05325 PF13193 AMP-binding enzyme C-terminal domain IPM43_05330 PF00535 Glycosyl transferase family 2 IPM43_05345 PF00132 Bacterial transferase hexapeptide (six repeats) IPM43_05350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IPM43_05355 PF02350 UDP-N-acetylglucosamine 2-epimerase IPM43_05375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IPM43_05375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IPM43_05385 PF03808 Glycosyl transferase WecB/TagA/CpsF family IPM43_05390 PF08241 Methyltransferase domain IPM43_05425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IPM43_05425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IPM43_05450 PF13439 Glycosyltransferase Family 4 IPM43_05450 PF00534 Glycosyl transferases group 1 IPM43_05465 PF02397 Bacterial sugar transferase IPM43_05490 PF00682 HMGL-like IPM43_05495 PF07729 FCD domain IPM43_05495 PF00392 Bacterial regulatory proteins, gntR family IPM43_05510 PF02515 CoA-transferase family III IPM43_05515 PF13936 Helix-turn-helix domain IPM43_05515 PF00665 Integrase core domain IPM43_05525 PF04234 CopC domain IPM43_05550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IPM43_05550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IPM43_05555 PF02805 Metal binding domain of Ada IPM43_05555 PF06029 AlkA N-terminal domain IPM43_05555 PF00730 HhH-GPD superfamily base excision DNA repair protein IPM43_05555 PF12833 Helix-turn-helix domain IPM43_05560 PF00378 Enoyl-CoA hydratase/isomerase IPM43_05570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_05570 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_05570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_05580 PF00999 Sodium/hydrogen exchanger family IPM43_05585 PF00909 Ammonium Transporter Family IPM43_05590 PF00543 Nitrogen regulatory protein P-II IPM43_05595 PF00909 Ammonium Transporter Family IPM43_05600 PF00543 Nitrogen regulatory protein P-II IPM43_05605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IPM43_05605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IPM43_05615 PF03405 Fatty acid desaturase IPM43_05620 PF03167 Uracil DNA glycosylase superfamily IPM43_05625 PF00300 Histidine phosphatase superfamily (branch 1) IPM43_05645 PF01012 Electron transfer flavoprotein domain IPM43_05645 PF00766 Electron transfer flavoprotein FAD-binding domain IPM43_05650 PF01012 Electron transfer flavoprotein domain IPM43_05655 PF00781 Diacylglycerol kinase catalytic domain IPM43_05660 PF03009 Glycerophosphoryl diester phosphodiesterase family IPM43_05665 PF02467 Transcription factor WhiB IPM43_05670 PF12282 Signal transduction histidine kinase IPM43_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_05670 PF07568 Histidine kinase IPM43_05675 PF02374 Anion-transporting ATPase IPM43_05680 PF02374 Anion-transporting ATPase IPM43_05695 PF10609 NUBPL iron-transfer P-loop NTPase IPM43_05695 PF01883 Iron-sulfur cluster assembly protein IPM43_05720 PF03918 Cytochrome C biogenesis protein IPM43_05725 PF08534 Redoxin IPM43_05730 PF01578 Cytochrome C assembly protein IPM43_05730 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IPM43_05735 PF01578 Cytochrome C assembly protein IPM43_05735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IPM43_05740 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IPM43_05740 PF01578 Cytochrome C assembly protein IPM43_05745 PF03100 CcmE IPM43_05755 PF01578 Cytochrome C assembly protein IPM43_05765 PF00005 ABC transporter IPM43_05785 PF00378 Enoyl-CoA hydratase/isomerase IPM43_05800 PF00440 Bacterial regulatory proteins, tetR family IPM43_05800 PF08361 MAATS-type transcriptional repressor, C-terminal region IPM43_05810 PF01740 STAS domain IPM43_05810 PF00916 Sulfate permease family IPM43_05840 PF00378 Enoyl-CoA hydratase/isomerase IPM43_05855 PF02391 MoaE protein IPM43_05875 PF07690 Major Facilitator Superfamily IPM43_05880 PF00486 Transcriptional regulatory protein, C terminal IPM43_05880 PF00072 Response regulator receiver domain IPM43_05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_05885 PF00512 His Kinase A (phospho-acceptor) domain IPM43_05890 PF01895 PhoU domain IPM43_05895 PF00005 ABC transporter IPM43_05900 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_05905 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_05910 PF12849 PBP superfamily domain IPM43_05920 PF17941 Polyphosphate kinase C-terminal domain 1 IPM43_05920 PF13089 Polyphosphate kinase N-terminal domain IPM43_05920 PF02503 Polyphosphate kinase middle domain IPM43_05920 PF13090 Polyphosphate kinase C-terminal domain 2 IPM43_05930 PF02467 Transcription factor WhiB IPM43_05935 PF02416 mttA/Hcf106 family IPM43_05940 PF02971 Formiminotransferase domain IPM43_05940 PF07837 Formiminotransferase domain, N-terminal subdomain IPM43_05945 PF02467 Transcription factor WhiB IPM43_05955 PF01048 Phosphorylase superfamily IPM43_05965 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IPM43_05965 PF00056 lactate/malate dehydrogenase, NAD binding domain IPM43_05970 PF01757 Acyltransferase family IPM43_05975 PF02219 Methylenetetrahydrofolate reductase IPM43_05980 PF02142 MGS-like domain IPM43_05980 PF01808 AICARFT/IMPCHase bienzyme IPM43_05990 PF02629 CoA binding domain IPM43_05990 PF00549 CoA-ligase IPM43_05995 PF00549 CoA-ligase IPM43_05995 PF08442 ATP-grasp domain IPM43_06000 PF02310 B12 binding domain IPM43_06000 PF01642 Methylmalonyl-CoA mutase IPM43_06020 PF13361 UvrD-like helicase C-terminal domain IPM43_06020 PF00580 UvrD/REP helicase N-terminal domain IPM43_06030 PF00512 His Kinase A (phospho-acceptor) domain IPM43_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_06030 PF00672 HAMP domain IPM43_06035 PF00072 Response regulator receiver domain IPM43_06035 PF00486 Transcriptional regulatory protein, C terminal IPM43_06050 PF03883 Peroxide stress protein YaaA IPM43_06055 PF00005 ABC transporter IPM43_06065 PF00067 Cytochrome P450 IPM43_06080 PF00877 NlpC/P60 family IPM43_06085 PF02540 NAD synthase IPM43_06085 PF00117 Glutamine amidotransferase class-I IPM43_06085 PF00958 GMP synthase C terminal domain IPM43_06095 PF00561 alpha/beta hydrolase fold IPM43_06095 PF00364 Biotin-requiring enzyme IPM43_06100 PF00282 Pyridoxal-dependent decarboxylase conserved domain IPM43_06105 PF00293 NUDIX domain IPM43_06130 PF00118 TCP-1/cpn60 chaperonin family IPM43_06135 PF00166 Chaperonin 10 Kd subunit IPM43_06140 PF02545 Maf-like protein IPM43_06145 PF01207 Dihydrouridine synthase (Dus) IPM43_06150 PF00814 Glycoprotease family IPM43_06160 PF00814 Glycoprotease family IPM43_06165 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IPM43_06170 PF00842 Alanine racemase, C-terminal domain IPM43_06170 PF01168 Alanine racemase, N-terminal domain IPM43_06175 PF01256 Carbohydrate kinase IPM43_06175 PF03853 YjeF-related protein N-terminus IPM43_06180 PF01648 4'-phosphopantetheinyl transferase superfamily IPM43_06185 PF01380 SIS domain IPM43_06190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IPM43_06190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IPM43_06190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IPM43_06190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IPM43_06195 PF00380 Ribosomal protein S9/S16 IPM43_06200 PF00572 Ribosomal protein L13 IPM43_06205 PF02358 Trehalose-phosphatase IPM43_06210 PF00982 Glycosyltransferase family 20 IPM43_06220 PF00512 His Kinase A (phospho-acceptor) domain IPM43_06220 PF00672 HAMP domain IPM43_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_06225 PF00072 Response regulator receiver domain IPM43_06225 PF00486 Transcriptional regulatory protein, C terminal IPM43_06230 PF01416 tRNA pseudouridine synthase IPM43_06235 PF01196 Ribosomal protein L17 IPM43_06240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IPM43_06240 PF01000 RNA polymerase Rpb3/RpoA insert domain IPM43_06240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IPM43_06245 PF00163 Ribosomal protein S4/S9 N-terminal domain IPM43_06245 PF01479 S4 domain IPM43_06250 PF00411 Ribosomal protein S11 IPM43_06255 PF00416 Ribosomal protein S13/S18 IPM43_06260 PF00444 Ribosomal protein L36 IPM43_06270 PF05191 Adenylate kinase, active site lid IPM43_06275 PF00344 SecY translocase IPM43_06280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IPM43_06285 PF00327 Ribosomal protein L30p/L7e IPM43_06290 PF00333 Ribosomal protein S5, N-terminal domain IPM43_06290 PF03719 Ribosomal protein S5, C-terminal domain IPM43_06295 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IPM43_06300 PF00347 Ribosomal protein L6 IPM43_06305 PF00410 Ribosomal protein S8 IPM43_06310 PF00253 Ribosomal protein S14p/S29e IPM43_06315 PF00673 ribosomal L5P family C-terminus IPM43_06315 PF00281 Ribosomal protein L5 IPM43_06320 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IPM43_06320 PF00467 KOW motif IPM43_06325 PF00238 Ribosomal protein L14p/L23e IPM43_06330 PF00366 Ribosomal protein S17 IPM43_06335 PF00831 Ribosomal L29 protein IPM43_06340 PF00252 Ribosomal protein L16p/L10e IPM43_06345 PF00189 Ribosomal protein S3, C-terminal domain IPM43_06345 PF07650 KH domain IPM43_06350 PF00237 Ribosomal protein L22p/L17e IPM43_06355 PF00203 Ribosomal protein S19 IPM43_06360 PF00181 Ribosomal Proteins L2, RNA binding domain IPM43_06360 PF03947 Ribosomal Proteins L2, C-terminal domain IPM43_06365 PF00276 Ribosomal protein L23 IPM43_06370 PF00573 Ribosomal protein L4/L1 family IPM43_06375 PF00297 Ribosomal protein L3 IPM43_06380 PF01266 FAD dependent oxidoreductase IPM43_06380 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IPM43_06385 PF13180 PDZ domain IPM43_06390 PF00338 Ribosomal protein S10p/S20e IPM43_06395 PF00009 Elongation factor Tu GTP binding domain IPM43_06395 PF03143 Elongation factor Tu C-terminal domain IPM43_06395 PF03144 Elongation factor Tu domain 2 IPM43_06400 PF03144 Elongation factor Tu domain 2 IPM43_06400 PF14492 Elongation Factor G, domain II IPM43_06400 PF00679 Elongation factor G C-terminus IPM43_06400 PF03764 Elongation factor G, domain IV IPM43_06400 PF00009 Elongation factor Tu GTP binding domain IPM43_06410 PF00177 Ribosomal protein S7p/S5e IPM43_06415 PF00164 Ribosomal protein S12/S23 IPM43_06420 PF04997 RNA polymerase Rpb1, domain 1 IPM43_06420 PF05000 RNA polymerase Rpb1, domain 4 IPM43_06420 PF04983 RNA polymerase Rpb1, domain 3 IPM43_06420 PF04998 RNA polymerase Rpb1, domain 5 IPM43_06420 PF00623 RNA polymerase Rpb1, domain 2 IPM43_06425 PF04560 RNA polymerase Rpb2, domain 7 IPM43_06425 PF00562 RNA polymerase Rpb2, domain 6 IPM43_06425 PF10385 RNA polymerase beta subunit external 1 domain IPM43_06425 PF04565 RNA polymerase Rpb2, domain 3 IPM43_06425 PF04561 RNA polymerase Rpb2, domain 2 IPM43_06425 PF04563 RNA polymerase beta subunit IPM43_06430 PF16320 Ribosomal protein L7/L12 dimerisation domain IPM43_06430 PF00542 Ribosomal protein L7/L12 C-terminal domain IPM43_06435 PF00466 Ribosomal protein L10 IPM43_06440 PF00687 Ribosomal protein L1p/L10e family IPM43_06445 PF03946 Ribosomal protein L11, N-terminal domain IPM43_06445 PF00298 Ribosomal protein L11, RNA binding domain IPM43_06450 PF00467 KOW motif IPM43_06450 PF02357 Transcription termination factor nusG IPM43_06465 PF00471 Ribosomal protein L33 IPM43_06470 PF03143 Elongation factor Tu C-terminal domain IPM43_06470 PF00009 Elongation factor Tu GTP binding domain IPM43_06470 PF03144 Elongation factor Tu domain 2 IPM43_06495 PF04461 Protein of unknown function (DUF520) IPM43_06510 PF16177 Acetyl-coenzyme A synthetase N-terminus IPM43_06510 PF00501 AMP-binding enzyme IPM43_06510 PF13193 AMP-binding enzyme C-terminal domain IPM43_06520 PF00361 Proton-conducting membrane transporter IPM43_06525 PF00361 Proton-conducting membrane transporter IPM43_06530 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IPM43_06530 PF00361 Proton-conducting membrane transporter IPM43_06530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IPM43_06535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IPM43_06540 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IPM43_06545 PF00037 4Fe-4S binding domain IPM43_06550 PF00146 NADH dehydrogenase IPM43_06555 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IPM43_06560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IPM43_06565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IPM43_06570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IPM43_06575 PF00282 Pyridoxal-dependent decarboxylase conserved domain IPM43_06580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IPM43_06580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IPM43_06585 PF02540 NAD synthase IPM43_06585 PF00958 GMP synthase C terminal domain IPM43_06585 PF00117 Glutamine amidotransferase class-I IPM43_06590 PF13291 ACT domain IPM43_06590 PF00291 Pyridoxal-phosphate dependent enzyme IPM43_06600 PF07687 Peptidase dimerisation domain IPM43_06600 PF01546 Peptidase family M20/M25/M40 IPM43_06610 PF17785 PUA-like domain IPM43_06610 PF10672 S-adenosylmethionine-dependent methyltransferase IPM43_06620 PF00067 Cytochrome P450 IPM43_06625 PF01975 Survival protein SurE IPM43_06665 PF02397 Bacterial sugar transferase IPM43_06670 PF13614 AAA domain IPM43_06670 PF13807 G-rich domain on putative tyrosine kinase IPM43_06670 PF02706 Chain length determinant protein IPM43_06700 PF00535 Glycosyl transferase family 2 IPM43_06705 PF00664 ABC transporter transmembrane region IPM43_06705 PF00005 ABC transporter IPM43_06720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_06720 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_06720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_06730 PF02627 Carboxymuconolactone decarboxylase family IPM43_06740 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_06740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_06740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_06745 PF13180 PDZ domain IPM43_06760 PF13180 PDZ domain IPM43_06770 PF13180 PDZ domain IPM43_06775 PF00005 ABC transporter IPM43_06775 PF17912 MalK OB fold domain IPM43_06780 PF02903 Alpha amylase, N-terminal ig-like domain IPM43_06780 PF00128 Alpha amylase, catalytic domain IPM43_06785 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_06790 PF14785 Maltose transport system permease protein MalF P2 domain IPM43_06790 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_06800 PF00356 Bacterial regulatory proteins, lacI family IPM43_06810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IPM43_06820 PF02397 Bacterial sugar transferase IPM43_06830 PF13361 UvrD-like helicase C-terminal domain IPM43_06830 PF00580 UvrD/REP helicase N-terminal domain IPM43_06840 PF00374 Nickel-dependent hydrogenase IPM43_06865 PF07859 alpha/beta hydrolase fold IPM43_06870 PF06974 Protein of unknown function (DUF1298) IPM43_06870 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IPM43_06895 PF07722 Peptidase C26 IPM43_06915 PF06224 Winged helix DNA-binding domain IPM43_06920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPM43_06925 PF13416 Bacterial extracellular solute-binding protein IPM43_06930 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_06935 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_06940 PF00005 ABC transporter IPM43_06940 PF17912 MalK OB fold domain IPM43_06945 PF00561 alpha/beta hydrolase fold IPM43_06955 PF03109 ABC1 family IPM43_06960 PF00561 alpha/beta hydrolase fold IPM43_06980 PF04545 Sigma-70, region 4 IPM43_06980 PF04539 Sigma-70 region 3 IPM43_06980 PF00140 Sigma-70 factor, region 1.2 IPM43_06980 PF04542 Sigma-70 region 2 IPM43_06990 PF17668 Acetyltransferase (GNAT) domain IPM43_06990 PF13530 Sterol carrier protein domain IPM43_07000 PF02225 PA domain IPM43_07000 PF04389 Peptidase family M28 IPM43_07020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPM43_07020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IPM43_07035 PF00437 Type II/IV secretion system protein IPM43_07060 PF01740 STAS domain IPM43_07065 PF00692 dUTPase IPM43_07085 PF02467 Transcription factor WhiB IPM43_07095 PF02683 Cytochrome C biogenesis protein transmembrane region IPM43_07110 PF01243 Pyridoxamine 5'-phosphate oxidase IPM43_07110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IPM43_07115 PF02403 Seryl-tRNA synthetase N-terminal domain IPM43_07115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM43_07120 PF00005 ABC transporter IPM43_07140 PF00510 Cytochrome c oxidase subunit III IPM43_07145 PF00115 Cytochrome C and Quinol oxidase polypeptide I IPM43_07150 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IPM43_07150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IPM43_07165 PF00115 Cytochrome C and Quinol oxidase polypeptide I IPM43_07170 PF01040 UbiA prenyltransferase family IPM43_07175 PF02617 ATP-dependent Clp protease adaptor protein ClpS IPM43_07210 PF03006 Haemolysin-III related IPM43_07215 PF00378 Enoyl-CoA hydratase/isomerase IPM43_07220 PF00582 Universal stress protein family IPM43_07225 PF00156 Phosphoribosyl transferase domain IPM43_07235 PF00206 Lyase IPM43_07235 PF10397 Adenylosuccinate lyase C-terminus IPM43_07240 PF00709 Adenylosuccinate synthetase IPM43_07245 PF00072 Response regulator receiver domain IPM43_07245 PF00486 Transcriptional regulatory protein, C terminal IPM43_07255 PF10431 C-terminal, D2-small domain, of ClpB protein IPM43_07255 PF02861 Clp amino terminal domain, pathogenicity island component IPM43_07255 PF17871 AAA lid domain IPM43_07255 PF07724 AAA domain (Cdc48 subfamily) IPM43_07255 PF00004 ATPase family associated with various cellular activities (AAA) IPM43_07265 PF13411 MerR HTH family regulatory protein IPM43_07270 PF00226 DnaJ domain IPM43_07270 PF01556 DnaJ C terminal domain IPM43_07270 PF00684 DnaJ central domain IPM43_07275 PF01025 GrpE IPM43_07280 PF00012 Hsp70 protein IPM43_07305 PF00486 Transcriptional regulatory protein, C terminal IPM43_07305 PF00072 Response regulator receiver domain IPM43_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_07310 PF08521 Two-component sensor kinase N-terminal IPM43_07310 PF00512 His Kinase A (phospho-acceptor) domain IPM43_07315 PF11897 Protein of unknown function (DUF3417) IPM43_07315 PF00343 Carbohydrate phosphorylase IPM43_07320 PF00809 Pterin binding enzyme IPM43_07325 PF00246 Zinc carboxypeptidase IPM43_07330 PF00300 Histidine phosphatase superfamily (branch 1) IPM43_07340 PF02754 Cysteine-rich domain IPM43_07340 PF13183 4Fe-4S dicluster domain IPM43_07340 PF02665 Nitrate reductase gamma subunit IPM43_07360 PF00692 dUTPase IPM43_07380 PF04075 F420H(2)-dependent quinone reductase IPM43_07395 PF01926 50S ribosome-binding GTPase IPM43_07400 PF03707 Bacterial signalling protein N terminal repeat IPM43_07400 PF00563 EAL domain IPM43_07400 PF00990 Diguanylate cyclase, GGDEF domain IPM43_07425 PF00772 DnaB-like helicase N terminal domain IPM43_07425 PF03796 DnaB-like helicase C terminal domain IPM43_07430 PF03948 Ribosomal protein L9, C-terminal domain IPM43_07430 PF01281 Ribosomal protein L9, N-terminal domain IPM43_07435 PF01084 Ribosomal protein S18 IPM43_07440 PF00436 Single-strand binding protein family IPM43_07445 PF01250 Ribosomal protein S6 IPM43_07470 PF08448 PAS fold IPM43_07470 PF08447 PAS fold IPM43_07470 PF00990 Diguanylate cyclase, GGDEF domain IPM43_07470 PF00563 EAL domain IPM43_07475 PF01966 HD domain IPM43_07475 PF01743 Poly A polymerase head domain IPM43_07475 PF12627 Probable RNA and SrmB- binding site of polymerase A IPM43_07480 PF00850 Histone deacetylase domain IPM43_07485 PF00583 Acetyltransferase (GNAT) family IPM43_07495 PF02645 Uncharacterised protein, DegV family COG1307 IPM43_07500 PF00069 Protein kinase domain IPM43_07500 PF03793 PASTA domain IPM43_07505 PF08281 Sigma-70, region 4 IPM43_07505 PF04542 Sigma-70 region 2 IPM43_07520 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_07525 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_07525 PF00085 Thioredoxin IPM43_07535 PF17762 HTH domain found in ParB protein IPM43_07535 PF02195 ParB-like nuclease domain IPM43_07540 PF13614 AAA domain IPM43_07545 PF02527 rRNA small subunit methyltransferase G IPM43_07555 PF14849 YidC periplasmic domain IPM43_07555 PF02096 60Kd inner membrane protein IPM43_07560 PF01809 Putative membrane protein insertion efficiency factor IPM43_07565 PF00825 Ribonuclease P IPM43_07570 PF00468 Ribosomal protein L34 IPM43_07575 PF08299 Bacterial dnaA protein helix-turn-helix IPM43_07575 PF00308 Bacterial dnaA protein IPM43_07580 PF02767 DNA polymerase III beta subunit, central domain IPM43_07580 PF02768 DNA polymerase III beta subunit, C-terminal domain IPM43_07580 PF00712 DNA polymerase III beta subunit, N-terminal domain IPM43_07585 PF02463 RecF/RecN/SMC N terminal domain IPM43_07590 PF05258 Dna[CI] antecedent, DciA IPM43_07595 PF00204 DNA gyrase B IPM43_07595 PF00986 DNA gyrase B subunit, carboxyl terminus IPM43_07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_07595 PF01751 Toprim domain IPM43_07600 PF03989 DNA gyrase C-terminal domain, beta-propeller IPM43_07600 PF00521 DNA gyrase/topoisomerase IV, subunit A IPM43_07610 PF12089 Transmembrane domain of unknown function (DUF3566) IPM43_07635 PF00571 CBS domain IPM43_07635 PF01769 Divalent cation transporter IPM43_07635 PF03448 MgtE intracellular N domain IPM43_07640 PF00296 Luciferase-like monooxygenase IPM43_07650 PF00296 Luciferase-like monooxygenase IPM43_07680 PF00202 Aminotransferase class-III IPM43_07685 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_07685 PF14759 Reductase C-terminal IPM43_07700 PF00202 Aminotransferase class-III IPM43_07710 PF00501 AMP-binding enzyme IPM43_07715 PF00108 Thiolase, N-terminal domain IPM43_07715 PF02803 Thiolase, C-terminal domain IPM43_07735 PF00117 Glutamine amidotransferase class-I IPM43_07740 PF00069 Protein kinase domain IPM43_07740 PF03793 PASTA domain IPM43_07745 PF00905 Penicillin binding protein transpeptidase domain IPM43_07750 PF01098 Cell cycle protein IPM43_07760 PF16697 Inner membrane component of T3SS, cytoplasmic domain IPM43_07835 PF13193 AMP-binding enzyme C-terminal domain IPM43_07835 PF00501 AMP-binding enzyme IPM43_07840 PF13419 Haloacid dehalogenase-like hydrolase IPM43_07845 PF00704 Glycosyl hydrolases family 18 IPM43_07845 PF01476 LysM domain IPM43_07850 PF00990 Diguanylate cyclase, GGDEF domain IPM43_07850 PF03707 Bacterial signalling protein N terminal repeat IPM43_07850 PF00563 EAL domain IPM43_07855 PF00990 Diguanylate cyclase, GGDEF domain IPM43_07855 PF03707 Bacterial signalling protein N terminal repeat IPM43_07855 PF00563 EAL domain IPM43_07860 PF00749 tRNA synthetases class I (E and Q), catalytic domain IPM43_07875 PF00355 Rieske [2Fe-2S] domain IPM43_07885 PF00005 ABC transporter IPM43_07895 PF02600 Disulfide bond formation protein DsbB IPM43_07905 PF01969 Protein of unknown function DUF111 IPM43_07910 PF00731 AIR carboxylase IPM43_07915 PF01842 ACT domain IPM43_07915 PF00800 Prephenate dehydratase IPM43_07925 PF01757 Acyltransferase family IPM43_07950 PF04978 Protein of unknown function (DUF664) IPM43_07955 PF00781 Diacylglycerol kinase catalytic domain IPM43_07965 PF01555 DNA methylase IPM43_07970 PF08031 Berberine and berberine like IPM43_07970 PF01565 FAD binding domain IPM43_07995 PF01545 Cation efflux family IPM43_08015 PF12848 ABC transporter IPM43_08015 PF16326 ABC transporter C-terminal domain IPM43_08015 PF00005 ABC transporter IPM43_08050 PF00561 alpha/beta hydrolase fold IPM43_08055 PF01553 Acyltransferase IPM43_08060 PF16701 Adenylate cyclase regulatory domain IPM43_08060 PF00211 Adenylate and Guanylate cyclase catalytic domain IPM43_08065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IPM43_08065 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IPM43_08070 PF01791 DeoC/LacD family aldolase IPM43_08075 PF02885 Glycosyl transferase family, helical bundle domain IPM43_08075 PF00591 Glycosyl transferase family, a/b domain IPM43_08075 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IPM43_08080 PF13302 Acetyltransferase (GNAT) domain IPM43_08080 PF00027 Cyclic nucleotide-binding domain IPM43_08085 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_08090 PF00753 Metallo-beta-lactamase superfamily IPM43_08090 PF10996 Beta-Casp domain IPM43_08090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IPM43_08100 PF00155 Aminotransferase class I and II IPM43_08105 PF00795 Carbon-nitrogen hydrolase IPM43_08110 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IPM43_08125 PF00005 ABC transporter IPM43_08130 PF01061 ABC-2 type transporter IPM43_08140 PF01625 Peptide methionine sulfoxide reductase IPM43_08145 PF02515 CoA-transferase family III IPM43_08150 PF00155 Aminotransferase class I and II IPM43_08160 PF01156 Inosine-uridine preferring nucleoside hydrolase IPM43_08170 PF06271 RDD family IPM43_08175 PF01039 Carboxyl transferase domain IPM43_08180 PF04402 Protein of unknown function (DUF541) IPM43_08185 PF04679 ATP dependent DNA ligase C terminal region IPM43_08185 PF01068 ATP dependent DNA ligase domain IPM43_08195 PF12169 DNA polymerase III subunits gamma and tau domain III IPM43_08200 PF00633 Helix-hairpin-helix motif IPM43_08200 PF02132 RecR protein IPM43_08200 PF13662 Toprim domain IPM43_08205 PF02803 Thiolase, C-terminal domain IPM43_08205 PF00108 Thiolase, N-terminal domain IPM43_08210 PF00107 Zinc-binding dehydrogenase IPM43_08210 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_08220 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_08220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_08220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_08230 PF00753 Metallo-beta-lactamase superfamily IPM43_08235 PF01641 SelR domain IPM43_08240 PF00293 NUDIX domain IPM43_08250 PF00266 Aminotransferase class-V IPM43_08255 PF02515 CoA-transferase family III IPM43_08260 PF01546 Peptidase family M20/M25/M40 IPM43_08260 PF07687 Peptidase dimerisation domain IPM43_08265 PF00293 NUDIX domain IPM43_08295 PF00485 Phosphoribulokinase / Uridine kinase family IPM43_08310 PF00557 Metallopeptidase family M24 IPM43_08325 PF00437 Type II/IV secretion system protein IPM43_08365 PF00633 Helix-hairpin-helix motif IPM43_08365 PF02457 DisA bacterial checkpoint controller nucleotide-binding IPM43_08365 PF10635 DisA bacterial checkpoint controller linker region IPM43_08375 PF18073 Rubredoxin metal binding domain IPM43_08380 PF01475 Ferric uptake regulator family IPM43_08385 PF06628 Catalase-related immune-responsive IPM43_08385 PF00199 Catalase IPM43_08395 PF00005 ABC transporter IPM43_08395 PF08402 TOBE domain IPM43_08400 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_08405 PF01547 Bacterial extracellular solute-binding protein IPM43_08410 PF10431 C-terminal, D2-small domain, of ClpB protein IPM43_08410 PF02861 Clp amino terminal domain, pathogenicity island component IPM43_08410 PF00004 ATPase family associated with various cellular activities (AAA) IPM43_08410 PF17871 AAA lid domain IPM43_08410 PF07724 AAA domain (Cdc48 subfamily) IPM43_08415 PF00348 Polyprenyl synthetase IPM43_08420 PF00561 alpha/beta hydrolase fold IPM43_08445 PF01171 PP-loop family IPM43_08445 PF09179 TilS substrate binding domain IPM43_08465 PF04542 Sigma-70 region 2 IPM43_08465 PF08281 Sigma-70, region 4 IPM43_08470 PF01047 MarR family IPM43_08495 PF00196 Bacterial regulatory proteins, luxR family IPM43_08500 PF00005 ABC transporter IPM43_08500 PF16326 ABC transporter C-terminal domain IPM43_08500 PF12848 ABC transporter IPM43_08520 PF02223 Thymidylate kinase IPM43_08525 PF13368 Topoisomerase C-terminal repeat IPM43_08525 PF01131 DNA topoisomerase IPM43_08525 PF01751 Toprim domain IPM43_08530 PF03193 RsgA GTPase IPM43_08535 PF17785 PUA-like domain IPM43_08535 PF10672 S-adenosylmethionine-dependent methyltransferase IPM43_08540 PF07963 Prokaryotic N-terminal methylation motif IPM43_08540 PF00114 Pilin (bacterial filament) IPM43_08550 PF00437 Type II/IV secretion system protein IPM43_08555 PF06750 Bacterial Peptidase A24 N-terminal domain IPM43_08555 PF01478 Type IV leader peptidase family IPM43_08575 PF00482 Type II secretion system (T2SS), protein F IPM43_08580 PF00437 Type II/IV secretion system protein IPM43_08580 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IPM43_08590 PF01367 5'-3' exonuclease, C-terminal SAM fold IPM43_08590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IPM43_08590 PF00476 DNA polymerase family A IPM43_08605 PF14437 MafB19-like deaminase IPM43_08630 PF00561 alpha/beta hydrolase fold IPM43_08635 PF00664 ABC transporter transmembrane region IPM43_08635 PF00005 ABC transporter IPM43_08645 PF13742 OB-fold nucleic acid binding domain IPM43_08645 PF02601 Exonuclease VII, large subunit IPM43_08655 PF00348 Polyprenyl synthetase IPM43_08665 PF12697 Alpha/beta hydrolase family IPM43_08680 PF02310 B12 binding domain IPM43_08680 PF01642 Methylmalonyl-CoA mutase IPM43_08685 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IPM43_08690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IPM43_08690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IPM43_08700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPM43_08710 PF13840 ACT domain IPM43_08710 PF00696 Amino acid kinase family IPM43_08710 PF01842 ACT domain IPM43_08715 PF08241 Methyltransferase domain IPM43_08720 PF01118 Semialdehyde dehydrogenase, NAD binding domain IPM43_08720 PF02774 Semialdehyde dehydrogenase, dimerisation domain IPM43_08730 PF08281 Sigma-70, region 4 IPM43_08730 PF04542 Sigma-70 region 2 IPM43_08750 PF13614 AAA domain IPM43_08755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IPM43_08765 PF00561 alpha/beta hydrolase fold IPM43_08770 PF03144 Elongation factor Tu domain 2 IPM43_08770 PF09107 Elongation factor SelB, winged helix IPM43_08770 PF09106 Elongation factor SelB, winged helix IPM43_08770 PF00009 Elongation factor Tu GTP binding domain IPM43_08770 PF09105 Elongation factor SelB, winged helix IPM43_08775 PF12390 Selenocysteine synthase N terminal IPM43_08775 PF03841 L-seryl-tRNA selenium transferase IPM43_08780 PF04186 FxsA cytoplasmic membrane protein IPM43_08785 PF00753 Metallo-beta-lactamase superfamily IPM43_08785 PF16123 Hydroxyacylglutathione hydrolase C-terminus IPM43_08790 PF02583 Metal-sensitive transcriptional repressor IPM43_08800 PF10609 NUBPL iron-transfer P-loop NTPase IPM43_08800 PF01883 Iron-sulfur cluster assembly protein IPM43_08805 PF01521 Iron-sulphur cluster biosynthesis IPM43_08815 PF01799 [2Fe-2S] binding domain IPM43_08815 PF00111 2Fe-2S iron-sulfur cluster binding domain IPM43_08835 PF01979 Amidohydrolase family IPM43_08840 PF01169 Uncharacterized protein family UPF0016 IPM43_08845 PF00486 Transcriptional regulatory protein, C terminal IPM43_08850 PF00120 Glutamine synthetase, catalytic domain IPM43_08850 PF03951 Glutamine synthetase, beta-Grasp domain IPM43_08855 PF03951 Glutamine synthetase, beta-Grasp domain IPM43_08855 PF00120 Glutamine synthetase, catalytic domain IPM43_08865 PF02540 NAD synthase IPM43_08865 PF00795 Carbon-nitrogen hydrolase IPM43_08870 PF00300 Histidine phosphatase superfamily (branch 1) IPM43_08885 PF01381 Helix-turn-helix IPM43_08890 PF13439 Glycosyltransferase Family 4 IPM43_08890 PF00534 Glycosyl transferases group 1 IPM43_08895 PF10722 Putative bacterial sensory transduction regulator IPM43_08900 PF14748 Pyrroline-5-carboxylate reductase dimerisation IPM43_08900 PF03807 NADP oxidoreductase coenzyme F420-dependent IPM43_08905 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase IPM43_08910 PF00501 AMP-binding enzyme IPM43_08910 PF13193 AMP-binding enzyme C-terminal domain IPM43_08920 PF06971 Putative DNA-binding protein N-terminus IPM43_08920 PF02629 CoA binding domain IPM43_08925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IPM43_08925 PF01488 Shikimate / quinate 5-dehydrogenase IPM43_08925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IPM43_08930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IPM43_08930 PF03900 Porphobilinogen deaminase, C-terminal domain IPM43_08950 PF00490 Delta-aminolevulinic acid dehydratase IPM43_08955 PF00202 Aminotransferase class-III IPM43_08965 PF01494 FAD binding domain IPM43_08985 PF00033 Cytochrome b/b6/petB IPM43_09010 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IPM43_09015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IPM43_09020 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IPM43_09025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IPM43_09035 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IPM43_09035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IPM43_09035 PF10531 SLBB domain IPM43_09040 PF01568 Molydopterin dinucleotide binding domain IPM43_09040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IPM43_09040 PF00384 Molybdopterin oxidoreductase IPM43_09045 PF00146 NADH dehydrogenase IPM43_09050 PF12838 4Fe-4S dicluster domain IPM43_09055 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IPM43_09060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IPM43_09065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IPM43_09065 PF00361 Proton-conducting membrane transporter IPM43_09070 PF00361 Proton-conducting membrane transporter IPM43_09075 PF00361 Proton-conducting membrane transporter IPM43_09080 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IPM43_09080 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IPM43_09085 PF00296 Luciferase-like monooxygenase IPM43_09090 PF00378 Enoyl-CoA hydratase/isomerase IPM43_09095 PF02583 Metal-sensitive transcriptional repressor IPM43_09105 PF00403 Heavy-metal-associated domain IPM43_09115 PF01580 FtsK/SpoIIIE family IPM43_09120 PF00571 CBS domain IPM43_09120 PF00005 ABC transporter IPM43_09125 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_09130 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_09140 PF00005 ABC transporter IPM43_09155 PF00027 Cyclic nucleotide-binding domain IPM43_09155 PF13545 Crp-like helix-turn-helix domain IPM43_09165 PF08032 RNA 2'-O ribose methyltransferase substrate binding IPM43_09165 PF00588 SpoU rRNA Methylase family IPM43_09170 PF13545 Crp-like helix-turn-helix domain IPM43_09170 PF00027 Cyclic nucleotide-binding domain IPM43_09180 PF12697 Alpha/beta hydrolase family IPM43_09185 PF07885 Ion channel IPM43_09210 PF00485 Phosphoribulokinase / Uridine kinase family IPM43_09225 PF02595 Glycerate kinase family IPM43_09230 PF01425 Amidase IPM43_09235 PF02597 ThiS family IPM43_09240 PF01266 FAD dependent oxidoreductase IPM43_09245 PF00118 TCP-1/cpn60 chaperonin family IPM43_09255 PF00230 Major intrinsic protein IPM43_09265 PF02634 FdhD/NarQ family IPM43_09270 PF06778 Chlorite dismutase IPM43_09280 PF01411 tRNA synthetases class II (A) IPM43_09280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPM43_09280 PF02272 DHHA1 domain IPM43_09285 PF00563 EAL domain IPM43_09285 PF00990 Diguanylate cyclase, GGDEF domain IPM43_09285 PF03707 Bacterial signalling protein N terminal repeat IPM43_09290 PF01909 Nucleotidyltransferase domain IPM43_09290 PF01966 HD domain IPM43_09290 PF08335 GlnD PII-uridylyltransferase IPM43_09295 PF00293 NUDIX domain IPM43_09345 PF03699 Uncharacterised protein family (UPF0182) IPM43_09375 PF00589 Phage integrase family IPM43_09375 PF14659 Phage integrase, N-terminal SAM-like domain IPM43_09390 PF02195 ParB-like nuclease domain IPM43_09390 PF17762 HTH domain found in ParB protein IPM43_09405 PF07730 Histidine kinase IPM43_09410 PF00196 Bacterial regulatory proteins, luxR family IPM43_09410 PF00072 Response regulator receiver domain IPM43_09435 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IPM43_09440 PF00196 Bacterial regulatory proteins, luxR family IPM43_09440 PF00072 Response regulator receiver domain IPM43_09520 PF00485 Phosphoribulokinase / Uridine kinase family IPM43_09540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_09540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_09540 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_09545 PF12728 Helix-turn-helix domain IPM43_09560 PF08281 Sigma-70, region 4 IPM43_09560 PF04542 Sigma-70 region 2 IPM43_09575 PF12704 MacB-like periplasmic core domain IPM43_09575 PF02687 FtsX-like permease family IPM43_09575 PF00005 ABC transporter IPM43_09580 PF12704 MacB-like periplasmic core domain IPM43_09580 PF02687 FtsX-like permease family IPM43_09580 PF00005 ABC transporter IPM43_09675 PF07690 Major Facilitator Superfamily IPM43_09680 PF00266 Aminotransferase class-V IPM43_09695 PF03781 Sulfatase-modifying factor enzyme 1 IPM43_09700 PF00884 Sulfatase IPM43_09705 PF00196 Bacterial regulatory proteins, luxR family IPM43_09705 PF00072 Response regulator receiver domain IPM43_09710 PF05231 MASE1 IPM43_09710 PF07730 Histidine kinase IPM43_09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_09735 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase IPM43_09740 PF01042 Endoribonuclease L-PSP IPM43_09755 PF14864 Alkyl sulfatase C-terminal IPM43_09755 PF14863 Alkyl sulfatase dimerisation IPM43_09755 PF00753 Metallo-beta-lactamase superfamily IPM43_09760 PF00440 Bacterial regulatory proteins, tetR family IPM43_09775 PF00196 Bacterial regulatory proteins, luxR family IPM43_09780 PF03176 MMPL family IPM43_09805 PF13439 Glycosyltransferase Family 4 IPM43_09850 PF01642 Methylmalonyl-CoA mutase IPM43_09855 PF00378 Enoyl-CoA hydratase/isomerase IPM43_09860 PF00561 alpha/beta hydrolase fold IPM43_09870 PF14310 Fibronectin type III-like domain IPM43_09870 PF00933 Glycosyl hydrolase family 3 N terminal domain IPM43_09870 PF01915 Glycosyl hydrolase family 3 C-terminal domain IPM43_09885 PF03814 Potassium-transporting ATPase A subunit IPM43_09895 PF02669 K+-transporting ATPase, c chain IPM43_09900 PF02702 Osmosensitive K+ channel His kinase sensor domain IPM43_09900 PF00512 His Kinase A (phospho-acceptor) domain IPM43_09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_09900 PF13493 Domain of unknown function (DUF4118) IPM43_09900 PF00582 Universal stress protein family IPM43_09905 PF00072 Response regulator receiver domain IPM43_09905 PF00486 Transcriptional regulatory protein, C terminal IPM43_09915 PF13936 Helix-turn-helix domain IPM43_09915 PF00665 Integrase core domain IPM43_09935 PF00005 ABC transporter IPM43_09950 PF13193 AMP-binding enzyme C-terminal domain IPM43_09950 PF00501 AMP-binding enzyme IPM43_09960 PF00005 ABC transporter IPM43_09980 PF00196 Bacterial regulatory proteins, luxR family IPM43_09980 PF00072 Response regulator receiver domain IPM43_10000 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IPM43_10000 PF13244 Domain of unknown function (DUF4040) IPM43_10000 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IPM43_10000 PF00361 Proton-conducting membrane transporter IPM43_10005 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IPM43_10010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IPM43_10015 PF00361 Proton-conducting membrane transporter IPM43_10020 PF01899 Na+/H+ ion antiporter subunit IPM43_10025 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IPM43_10030 PF03334 Na+/H+ antiporter subunit IPM43_10035 PF01323 DSBA-like thioredoxin domain IPM43_10050 PF00883 Cytosol aminopeptidase family, catalytic domain IPM43_10050 PF02789 Cytosol aminopeptidase family, N-terminal domain IPM43_10055 PF02080 TrkA-C domain IPM43_10055 PF03600 Citrate transporter IPM43_10060 PF05726 Pirin C-terminal cupin domain IPM43_10060 PF02678 Pirin IPM43_10075 PF01209 ubiE/COQ5 methyltransferase family IPM43_10105 PF06974 Protein of unknown function (DUF1298) IPM43_10105 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IPM43_10130 PF12399 Branched-chain amino acid ATP-binding cassette transporter IPM43_10130 PF00005 ABC transporter IPM43_10135 PF00005 ABC transporter IPM43_10145 PF13193 AMP-binding enzyme C-terminal domain IPM43_10145 PF00501 AMP-binding enzyme IPM43_10150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IPM43_10150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IPM43_10160 PF02627 Carboxymuconolactone decarboxylase family IPM43_10165 PF00960 Neocarzinostatin family IPM43_10170 PF07690 Major Facilitator Superfamily IPM43_10180 PF01039 Carboxyl transferase domain IPM43_10185 PF00364 Biotin-requiring enzyme IPM43_10185 PF02785 Biotin carboxylase C-terminal domain IPM43_10185 PF00289 Biotin carboxylase, N-terminal domain IPM43_10185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPM43_10200 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain IPM43_10200 PF08608 Wyosine base formation IPM43_10225 PF12706 Beta-lactamase superfamily domain IPM43_10235 PF13186 Iron-sulfur cluster-binding domain IPM43_10235 PF04055 Radical SAM superfamily IPM43_10245 PF01883 Iron-sulfur cluster assembly protein IPM43_10260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IPM43_10265 PF00271 Helicase conserved C-terminal domain IPM43_10265 PF04408 Helicase associated domain (HA2) IPM43_10265 PF00270 DEAD/DEAH box helicase IPM43_10265 PF11898 Domain of unknown function (DUF3418) IPM43_10265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IPM43_10275 PF00595 PDZ domain IPM43_10280 PF03466 LysR substrate binding domain IPM43_10280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPM43_10290 PF01544 CorA-like Mg2+ transporter protein IPM43_10295 PF03030 Inorganic H+ pyrophosphatase IPM43_10300 PF09335 SNARE associated Golgi protein IPM43_10310 PF00296 Luciferase-like monooxygenase IPM43_10325 PF00271 Helicase conserved C-terminal domain IPM43_10325 PF00270 DEAD/DEAH box helicase IPM43_10325 PF03880 DbpA RNA binding domain IPM43_10335 PF00106 short chain dehydrogenase IPM43_10345 PF03747 ADP-ribosylglycohydrolase IPM43_10355 PF01384 Phosphate transporter family IPM43_10365 PF00743 Flavin-binding monooxygenase-like IPM43_10385 PF00005 ABC transporter IPM43_10390 PF05048 Periplasmic copper-binding protein (NosD) IPM43_10400 PF13473 Cupredoxin-like domain IPM43_10400 PF18764 Nitrous oxide reductase propeller repeat IPM43_10400 PF18793 Nitrous oxide reductase propeller repeat 2 IPM43_10420 PF00155 Aminotransferase class I and II IPM43_10425 PF01370 NAD dependent epimerase/dehydratase family IPM43_10440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IPM43_10440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IPM43_10440 PF10531 SLBB domain IPM43_10445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IPM43_10445 PF01568 Molydopterin dinucleotide binding domain IPM43_10445 PF12838 4Fe-4S dicluster domain IPM43_10445 PF00384 Molybdopterin oxidoreductase IPM43_10445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IPM43_10450 PF17946 RecC C-terminal domain IPM43_10455 PF13361 UvrD-like helicase C-terminal domain IPM43_10455 PF00580 UvrD/REP helicase N-terminal domain IPM43_10455 PF12705 PD-(D/E)XK nuclease superfamily IPM43_10460 PF13538 UvrD-like helicase C-terminal domain IPM43_10465 PF13476 AAA domain IPM43_10470 PF00149 Calcineurin-like phosphoesterase IPM43_10470 PF12320 Type 5 capsule protein repressor C-terminal domain IPM43_10485 PF00378 Enoyl-CoA hydratase/isomerase IPM43_10500 PF00005 ABC transporter IPM43_10505 PF02653 Branched-chain amino acid transport system / permease component IPM43_10510 PF00005 ABC transporter IPM43_10535 PF00171 Aldehyde dehydrogenase family IPM43_10540 PF01557 Fumarylacetoacetate (FAA) hydrolase family IPM43_10555 PF03055 Retinal pigment epithelial membrane protein IPM43_10560 PF01507 Phosphoadenosine phosphosulfate reductase family IPM43_10565 PF14824 Sirohaem biosynthesis protein central IPM43_10565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPM43_10565 PF10414 Sirohaem synthase dimerisation region IPM43_10570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPM43_10570 PF10414 Sirohaem synthase dimerisation region IPM43_10570 PF14824 Sirohaem biosynthesis protein central IPM43_10575 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IPM43_10575 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IPM43_10590 PF16347 Domain of unknown function (DUF4976) IPM43_10590 PF00884 Sulfatase IPM43_10605 PF00005 ABC transporter IPM43_10615 PF03167 Uracil DNA glycosylase superfamily IPM43_10635 PF00291 Pyridoxal-phosphate dependent enzyme IPM43_10645 PF00561 alpha/beta hydrolase fold IPM43_10655 PF06974 Protein of unknown function (DUF1298) IPM43_10655 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IPM43_10660 PF07722 Peptidase C26 IPM43_10665 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_10665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_10665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_10675 PF00120 Glutamine synthetase, catalytic domain IPM43_10685 PF00067 Cytochrome P450 IPM43_10690 PF06314 Acetoacetate decarboxylase (ADC) IPM43_10695 PF00480 ROK family IPM43_10700 PF04228 Putative neutral zinc metallopeptidase IPM43_10730 PF00535 Glycosyl transferase family 2 IPM43_10735 PF02633 Creatinine amidohydrolase IPM43_10760 PF01494 FAD binding domain IPM43_10765 PF01012 Electron transfer flavoprotein domain IPM43_10765 PF00766 Electron transfer flavoprotein FAD-binding domain IPM43_10775 PF07690 Major Facilitator Superfamily IPM43_10785 PF02222 ATP-grasp domain IPM43_10785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IPM43_10790 PF00731 AIR carboxylase IPM43_10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_10795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IPM43_10800 PF02660 Glycerol-3-phosphate acyltransferase IPM43_10805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IPM43_10805 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_10810 PF13186 Iron-sulfur cluster-binding domain IPM43_10810 PF04055 Radical SAM superfamily IPM43_10825 PF13538 UvrD-like helicase C-terminal domain IPM43_10835 PF00107 Zinc-binding dehydrogenase IPM43_10835 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_10840 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_10840 PF00107 Zinc-binding dehydrogenase IPM43_10845 PF07728 AAA domain (dynein-related subfamily) IPM43_10845 PF08406 CbbQ/NirQ/NorQ C-terminal IPM43_10855 PF03816 Cell envelope-related transcriptional attenuator domain IPM43_10860 PF00133 tRNA synthetases class I (I, L, M and V) IPM43_10860 PF08264 Anticodon-binding domain of tRNA IPM43_10865 PF01406 tRNA synthetases class I (C) catalytic domain IPM43_10865 PF09190 DALR domain IPM43_10870 PF07690 Major Facilitator Superfamily IPM43_10885 PF06827 Zinc finger found in FPG and IleRS IPM43_10885 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IPM43_10930 PF00890 FAD binding domain IPM43_10930 PF02910 Fumarate reductase flavoprotein C-term IPM43_10935 PF13085 2Fe-2S iron-sulfur cluster binding domain IPM43_10945 PF01925 Sulfite exporter TauE/SafE IPM43_10970 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_10970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_10970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_10985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IPM43_10985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IPM43_10995 PF08241 Methyltransferase domain IPM43_11000 PF13439 Glycosyltransferase Family 4 IPM43_11000 PF00534 Glycosyl transferases group 1 IPM43_11020 PF00534 Glycosyl transferases group 1 IPM43_11020 PF00862 Sucrose synthase IPM43_11025 PF00535 Glycosyl transferase family 2 IPM43_11030 PF00535 Glycosyl transferase family 2 IPM43_11065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IPM43_11065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IPM43_11070 PF00005 ABC transporter IPM43_11070 PF12704 MacB-like periplasmic core domain IPM43_11070 PF02687 FtsX-like permease family IPM43_11075 PF00005 ABC transporter IPM43_11075 PF02687 FtsX-like permease family IPM43_11075 PF12704 MacB-like periplasmic core domain IPM43_11080 PF00672 HAMP domain IPM43_11080 PF00211 Adenylate and Guanylate cyclase catalytic domain IPM43_11080 PF02743 Cache domain IPM43_11095 PF10417 C-terminal domain of 1-Cys peroxiredoxin IPM43_11095 PF00578 AhpC/TSA family IPM43_11105 PF01039 Carboxyl transferase domain IPM43_11120 PF00313 'Cold-shock' DNA-binding domain IPM43_11130 PF04073 Aminoacyl-tRNA editing domain IPM43_11135 PF13361 UvrD-like helicase C-terminal domain IPM43_11135 PF00570 HRDC domain IPM43_11145 PF18357 Diphteria toxin repressor SH3 domain IPM43_11145 PF02742 Iron dependent repressor, metal binding and dimerisation domain IPM43_11145 PF01325 Iron dependent repressor, N-terminal DNA binding domain IPM43_11155 PF01209 ubiE/COQ5 methyltransferase family IPM43_11170 PF02580 D-Tyr-tRNA(Tyr) deacylase IPM43_11175 PF00795 Carbon-nitrogen hydrolase IPM43_11185 PF01593 Flavin containing amine oxidoreductase IPM43_11190 PF06167 Glucose-regulated metallo-peptidase M90 IPM43_11195 PF00762 Ferrochelatase IPM43_11200 PF01208 Uroporphyrinogen decarboxylase (URO-D) IPM43_11205 PF02630 SCO1/SenC IPM43_11215 PF00578 AhpC/TSA family IPM43_11220 PF01435 Peptidase family M48 IPM43_11225 PF01966 HD domain IPM43_11225 PF00072 Response regulator receiver domain IPM43_11230 PF00440 Bacterial regulatory proteins, tetR family IPM43_11240 PF01790 Prolipoprotein diacylglyceryl transferase IPM43_11250 PF02686 Glu-tRNAGln amidotransferase C subunit IPM43_11255 PF01425 Amidase IPM43_11260 PF02637 GatB domain IPM43_11260 PF02934 GatB/GatE catalytic domain IPM43_11265 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IPM43_11265 PF02152 Dihydroneopterin aldolase IPM43_11270 PF00809 Pterin binding enzyme IPM43_11275 PF00535 Glycosyl transferase family 2 IPM43_11285 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_11285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11295 PF00108 Thiolase, N-terminal domain IPM43_11295 PF02803 Thiolase, C-terminal domain IPM43_11300 PF00067 Cytochrome P450 IPM43_11315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11325 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_11340 PF00296 Luciferase-like monooxygenase IPM43_11345 PF00378 Enoyl-CoA hydratase/isomerase IPM43_11350 PF00296 Luciferase-like monooxygenase IPM43_11380 PF02515 CoA-transferase family III IPM43_11385 PF00171 Aldehyde dehydrogenase family IPM43_11390 PF07969 Amidohydrolase family IPM43_11395 PF00296 Luciferase-like monooxygenase IPM43_11400 PF14765 Polyketide synthase dehydratase IPM43_11400 PF08659 KR domain IPM43_11400 PF00550 Phosphopantetheine attachment site IPM43_11400 PF02801 Beta-ketoacyl synthase, C-terminal domain IPM43_11400 PF00109 Beta-ketoacyl synthase, N-terminal domain IPM43_11400 PF16197 Ketoacyl-synthetase C-terminal extension IPM43_11400 PF00107 Zinc-binding dehydrogenase IPM43_11400 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_11400 PF00698 Acyl transferase domain IPM43_11410 PF00501 AMP-binding enzyme IPM43_11410 PF13193 AMP-binding enzyme C-terminal domain IPM43_11415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IPM43_11415 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_11420 PF00378 Enoyl-CoA hydratase/isomerase IPM43_11425 PF00106 short chain dehydrogenase IPM43_11440 PF13193 AMP-binding enzyme C-terminal domain IPM43_11440 PF00501 AMP-binding enzyme IPM43_11460 PF00296 Luciferase-like monooxygenase IPM43_11485 PF00106 short chain dehydrogenase IPM43_11490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11490 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_11490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11495 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_11510 PF00990 Diguanylate cyclase, GGDEF domain IPM43_11510 PF03707 Bacterial signalling protein N terminal repeat IPM43_11510 PF00563 EAL domain IPM43_11520 PF13193 AMP-binding enzyme C-terminal domain IPM43_11520 PF00501 AMP-binding enzyme IPM43_11525 PF13193 AMP-binding enzyme C-terminal domain IPM43_11525 PF00501 AMP-binding enzyme IPM43_11530 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_11530 PF00107 Zinc-binding dehydrogenase IPM43_11540 PF16657 Maltogenic Amylase, C-terminal domain IPM43_11540 PF00128 Alpha amylase, catalytic domain IPM43_11555 PF13193 AMP-binding enzyme C-terminal domain IPM43_11555 PF00501 AMP-binding enzyme IPM43_11570 PF01975 Survival protein SurE IPM43_11580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11585 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_11585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11590 PF01757 Acyltransferase family IPM43_11595 PF13686 DsrE/DsrF/DrsH-like family IPM43_11600 PF04358 DsrC like protein IPM43_11620 PF00108 Thiolase, N-terminal domain IPM43_11620 PF02803 Thiolase, C-terminal domain IPM43_11635 PF01370 NAD dependent epimerase/dehydratase family IPM43_11640 PF07969 Amidohydrolase family IPM43_11650 PF01875 Memo-like protein IPM43_11665 PF01227 GTP cyclohydrolase I IPM43_11670 PF00378 Enoyl-CoA hydratase/isomerase IPM43_11680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_11680 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_11695 PF00920 Dehydratase family IPM43_11710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IPM43_11710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IPM43_11715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPM43_11715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IPM43_11715 PF00205 Thiamine pyrophosphate enzyme, central domain IPM43_11720 PF10369 Small subunit of acetolactate synthase IPM43_11725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IPM43_11725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IPM43_11730 PF01053 Cys/Met metabolism PLP-dependent enzyme IPM43_11740 PF00266 Aminotransferase class-V IPM43_11750 PF00155 Aminotransferase class I and II IPM43_11755 PF02654 Cobalamin-5-phosphate synthase IPM43_11760 PF02277 Phosphoribosyltransferase IPM43_11765 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IPM43_11770 PF01497 Periplasmic binding protein IPM43_11775 PF01032 FecCD transport family IPM43_11780 PF00005 ABC transporter IPM43_11815 PF02355 Protein export membrane protein IPM43_11815 PF07549 SecD/SecF GG Motif IPM43_11820 PF08402 TOBE domain IPM43_11820 PF00005 ABC transporter IPM43_11825 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_11855 PF01106 NifU-like domain IPM43_11860 PF00665 Integrase core domain IPM43_11860 PF13936 Helix-turn-helix domain IPM43_11865 PF00128 Alpha amylase, catalytic domain IPM43_11865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IPM43_11865 PF02806 Alpha amylase, C-terminal all-beta domain IPM43_11875 PF00459 Inositol monophosphatase family IPM43_11880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IPM43_11880 PF02780 Transketolase, C-terminal domain IPM43_11880 PF02779 Transketolase, pyrimidine binding domain IPM43_11895 PF00205 Thiamine pyrophosphate enzyme, central domain IPM43_11895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IPM43_11895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPM43_11905 PF01523 Putative modulator of DNA gyrase IPM43_11910 PF01523 Putative modulator of DNA gyrase IPM43_11925 PF02673 Bacitracin resistance protein BacA IPM43_11940 PF00483 Nucleotidyl transferase IPM43_11950 PF03453 MoeA N-terminal region (domain I and II) IPM43_11950 PF03454 MoeA C-terminal region (domain IV) IPM43_11950 PF00994 Probable molybdopterin binding domain IPM43_11955 PF06463 Molybdenum Cofactor Synthesis C IPM43_11955 PF04055 Radical SAM superfamily IPM43_11965 PF01967 MoaC family IPM43_11990 PF01638 HxlR-like helix-turn-helix IPM43_11995 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IPM43_11995 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_11995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_12000 PF02548 Ketopantoate hydroxymethyltransferase IPM43_12005 PF00561 alpha/beta hydrolase fold IPM43_12020 PF11838 ERAP1-like C-terminal domain IPM43_12020 PF01433 Peptidase family M1 domain IPM43_12025 PF00294 pfkB family carbohydrate kinase IPM43_12030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IPM43_12030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IPM43_12030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IPM43_12030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IPM43_12040 PF00962 Adenosine/AMP deaminase IPM43_12045 PF00962 Adenosine/AMP deaminase IPM43_12050 PF02653 Branched-chain amino acid transport system / permease component IPM43_12060 PF00005 ABC transporter IPM43_12065 PF02608 ABC transporter substrate-binding protein PnrA-like IPM43_12080 PF00378 Enoyl-CoA hydratase/isomerase IPM43_12095 PF00378 Enoyl-CoA hydratase/isomerase IPM43_12105 PF13302 Acetyltransferase (GNAT) domain IPM43_12110 PF02541 Ppx/GppA phosphatase family IPM43_12120 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IPM43_12125 PF00877 NlpC/P60 family IPM43_12145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IPM43_12145 PF00128 Alpha amylase, catalytic domain IPM43_12150 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IPM43_12150 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IPM43_12155 PF01266 FAD dependent oxidoreductase IPM43_12180 PF00941 FAD binding domain in molybdopterin dehydrogenase IPM43_12180 PF03450 CO dehydrogenase flavoprotein C-terminal domain IPM43_12185 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IPM43_12185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IPM43_12190 PF00111 2Fe-2S iron-sulfur cluster binding domain IPM43_12190 PF01799 [2Fe-2S] binding domain IPM43_12200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IPM43_12200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IPM43_12210 PF03952 Enolase, N-terminal domain IPM43_12210 PF00113 Enolase, C-terminal TIM barrel domain IPM43_12215 PF03819 MazG nucleotide pyrophosphohydrolase domain IPM43_12215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPM43_12225 PF03461 TRCF domain IPM43_12225 PF00270 DEAD/DEAH box helicase IPM43_12225 PF00271 Helicase conserved C-terminal domain IPM43_12225 PF17757 UvrB interaction domain IPM43_12225 PF02559 CarD-like/TRCF domain IPM43_12230 PF01195 Peptidyl-tRNA hydrolase IPM43_12235 PF01386 Ribosomal L25p family IPM43_12235 PF14693 Ribosomal protein TL5, C-terminal domain IPM43_12240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IPM43_12240 PF14572 Phosphoribosyl synthetase-associated domain IPM43_12245 PF12804 MobA-like NTP transferase domain IPM43_12245 PF00132 Bacterial transferase hexapeptide (six repeats) IPM43_12260 PF00288 GHMP kinases N terminal domain IPM43_12260 PF08544 GHMP kinases C terminal IPM43_12265 PF00398 Ribosomal RNA adenine dimethylase IPM43_12275 PF01026 TatD related DNase IPM43_12280 PF09334 tRNA synthetases class I (M) IPM43_12280 PF08264 Anticodon-binding domain of tRNA IPM43_12305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPM43_12315 PF01176 Translation initiation factor 1A / IF-1 IPM43_12330 PF01933 Uncharacterised protein family UPF0052 IPM43_12335 PF13193 AMP-binding enzyme C-terminal domain IPM43_12335 PF00501 AMP-binding enzyme IPM43_12340 PF02803 Thiolase, C-terminal domain IPM43_12340 PF00108 Thiolase, N-terminal domain IPM43_12350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_12350 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_12350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_12360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IPM43_12380 PF02569 Pantoate-beta-alanine ligase IPM43_12380 PF02224 Cytidylate kinase IPM43_12385 PF06071 Protein of unknown function (DUF933) IPM43_12385 PF01926 50S ribosome-binding GTPase IPM43_12390 PF14716 Helix-hairpin-helix domain IPM43_12390 PF02811 PHP domain IPM43_12390 PF14791 DNA polymerase beta thumb IPM43_12395 PF03458 UPF0126 domain IPM43_12400 PF00326 Prolyl oligopeptidase family IPM43_12400 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IPM43_12465 PF12894 Anaphase-promoting complex subunit 4 WD40 domain IPM43_12465 PF00400 WD domain, G-beta repeat IPM43_12495 PF00176 SNF2 family N-terminal domain IPM43_12495 PF00271 Helicase conserved C-terminal domain IPM43_12510 PF00176 SNF2 family N-terminal domain IPM43_12510 PF04434 SWIM zinc finger IPM43_12510 PF00271 Helicase conserved C-terminal domain IPM43_12535 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IPM43_12545 PF01758 Sodium Bile acid symporter family IPM43_12550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IPM43_12580 PF01209 ubiE/COQ5 methyltransferase family IPM43_12590 PF00211 Adenylate and Guanylate cyclase catalytic domain IPM43_12590 PF13191 AAA ATPase domain IPM43_12615 PF01557 Fumarylacetoacetate (FAA) hydrolase family IPM43_12645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_12645 PF00672 HAMP domain IPM43_12645 PF00512 His Kinase A (phospho-acceptor) domain IPM43_12650 PF00072 Response regulator receiver domain IPM43_12650 PF00486 Transcriptional regulatory protein, C terminal IPM43_12665 PF02424 ApbE family IPM43_12695 PF01638 HxlR-like helix-turn-helix IPM43_12700 PF00378 Enoyl-CoA hydratase/isomerase IPM43_12740 PF00582 Universal stress protein family IPM43_12745 PF16884 N-terminal domain of oxidoreductase IPM43_12745 PF00107 Zinc-binding dehydrogenase IPM43_12750 PF00027 Cyclic nucleotide-binding domain IPM43_12750 PF13302 Acetyltransferase (GNAT) domain IPM43_12780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IPM43_12780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IPM43_12785 PF08240 Alcohol dehydrogenase GroES-like domain IPM43_12785 PF00107 Zinc-binding dehydrogenase IPM43_12790 PF01494 FAD binding domain IPM43_12800 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IPM43_12800 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IPM43_12810 PF00764 Arginosuccinate synthase IPM43_12815 PF01321 Creatinase/Prolidase N-terminal domain IPM43_12815 PF00557 Metallopeptidase family M24 IPM43_12825 PF07969 Amidohydrolase family IPM43_12865 PF03960 ArsC family IPM43_12870 PF04226 Transglycosylase associated protein IPM43_12875 PF00005 ABC transporter IPM43_12875 PF00664 ABC transporter transmembrane region IPM43_12880 PF00664 ABC transporter transmembrane region IPM43_12880 PF00005 ABC transporter IPM43_12890 PF02607 B12 binding domain IPM43_12890 PF02574 Homocysteine S-methyltransferase IPM43_12890 PF02965 Vitamin B12 dependent methionine synthase, activation domain IPM43_12890 PF02310 B12 binding domain IPM43_12890 PF00809 Pterin binding enzyme IPM43_12895 PF01923 Cobalamin adenosyltransferase IPM43_12900 PF02789 Cytosol aminopeptidase family, N-terminal domain IPM43_12900 PF00883 Cytosol aminopeptidase family, catalytic domain IPM43_12910 PF02146 Sir2 family IPM43_12915 PF00899 ThiF family IPM43_12920 PF17954 Quercetinase C-terminal cupin domain IPM43_12920 PF02678 Pirin IPM43_12930 PF00596 Class II Aldolase and Adducin N-terminal domain IPM43_12935 PF02469 Fasciclin domain IPM43_12945 PF01642 Methylmalonyl-CoA mutase IPM43_12945 PF02310 B12 binding domain IPM43_12955 PF14602 Hexapeptide repeat of succinyl-transferase IPM43_12955 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle IPM43_12960 PF01336 OB-fold nucleic acid binding domain IPM43_12960 PF00152 tRNA synthetases class II (D, K and N) IPM43_12965 PF07992 Pyridine nucleotide-disulphide oxidoreductase IPM43_12965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPM43_12970 PF06271 RDD family IPM43_12975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPM43_12975 PF00364 Biotin-requiring enzyme IPM43_12975 PF02785 Biotin carboxylase C-terminal domain IPM43_12975 PF00289 Biotin carboxylase, N-terminal domain IPM43_12980 PF08279 HTH domain IPM43_12980 PF03099 Biotin/lipoate A/B protein ligase family IPM43_12980 PF02237 Biotin protein ligase C terminal domain IPM43_12985 PF03816 Cell envelope-related transcriptional attenuator domain IPM43_12990 PF00483 Nucleotidyl transferase IPM43_12995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IPM43_13000 PF16363 GDP-mannose 4,6 dehydratase IPM43_13005 PF04321 RmlD substrate binding domain IPM43_13010 PF02769 AIR synthase related protein, C-terminal domain IPM43_13010 PF00586 AIR synthase related protein, N-terminal domain IPM43_13015 PF01351 Ribonuclease HII IPM43_13020 PF01593 Flavin containing amine oxidoreductase IPM43_13025 PF01053 Cys/Met metabolism PLP-dependent enzyme IPM43_13030 PF00571 CBS domain IPM43_13030 PF00291 Pyridoxal-phosphate dependent enzyme IPM43_13035 PF03176 MMPL family IPM43_13050 PF07728 AAA domain (dynein-related subfamily) IPM43_13060 PF05762 VWA domain containing CoxE-like protein IPM43_13065 PF00196 Bacterial regulatory proteins, luxR family IPM43_13085 PF00486 Transcriptional regulatory protein, C terminal IPM43_13085 PF00072 Response regulator receiver domain IPM43_13090 PF13344 Haloacid dehalogenase-like hydrolase IPM43_13090 PF00293 NUDIX domain IPM43_13100 PF01053 Cys/Met metabolism PLP-dependent enzyme IPM43_13105 PF01336 OB-fold nucleic acid binding domain IPM43_13105 PF02811 PHP domain IPM43_13105 PF14579 Helix-hairpin-helix motif IPM43_13105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IPM43_13105 PF07733 Bacterial DNA polymerase III alpha NTPase domain IPM43_13110 PF01810 LysE type translocator IPM43_13120 PF01546 Peptidase family M20/M25/M40 IPM43_13120 PF07687 Peptidase dimerisation domain IPM43_13140 PF01694 Rhomboid family IPM43_13145 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_13145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_13145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_13155 PF03707 Bacterial signalling protein N terminal repeat IPM43_13155 PF00563 EAL domain IPM43_13155 PF00990 Diguanylate cyclase, GGDEF domain IPM43_13165 PF02585 GlcNAc-PI de-N-acetylase IPM43_13180 PF00565 Staphylococcal nuclease homologue IPM43_13185 PF00108 Thiolase, N-terminal domain IPM43_13185 PF02803 Thiolase, C-terminal domain IPM43_13190 PF09297 NADH pyrophosphatase zinc ribbon domain IPM43_13190 PF00293 NUDIX domain IPM43_13190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain IPM43_13195 PF07676 WD40-like Beta Propeller Repeat IPM43_13195 PF00326 Prolyl oligopeptidase family IPM43_13245 PF06974 Protein of unknown function (DUF1298) IPM43_13245 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IPM43_13275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_13275 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_13275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_13280 PF00106 short chain dehydrogenase IPM43_13285 PF00501 AMP-binding enzyme IPM43_13285 PF13193 AMP-binding enzyme C-terminal domain IPM43_13290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_13290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_13290 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_13295 PF00378 Enoyl-CoA hydratase/isomerase IPM43_13305 PF00501 AMP-binding enzyme IPM43_13305 PF13193 AMP-binding enzyme C-terminal domain IPM43_13320 PF01593 Flavin containing amine oxidoreductase IPM43_13340 PF01979 Amidohydrolase family IPM43_13345 PF01979 Amidohydrolase family IPM43_13350 PF01327 Polypeptide deformylase IPM43_13355 PF17391 Urocanase N-terminal domain IPM43_13355 PF01175 Urocanase Rossmann-like domain IPM43_13355 PF17392 Urocanase C-terminal domain IPM43_13360 PF00221 Aromatic amino acid lyase IPM43_13365 PF16916 Dimerisation domain of Zinc Transporter IPM43_13365 PF01545 Cation efflux family IPM43_13375 PF00296 Luciferase-like monooxygenase IPM43_13380 PF00144 Beta-lactamase IPM43_13385 PF03060 Nitronate monooxygenase IPM43_13390 PF01494 FAD binding domain IPM43_13400 PF01575 MaoC like domain IPM43_13410 PF01939 Endonuclease NucS IPM43_13415 PF03109 ABC1 family IPM43_13435 PF00459 Inositol monophosphatase family IPM43_13460 PF12848 ABC transporter IPM43_13460 PF00005 ABC transporter IPM43_13470 PF04542 Sigma-70 region 2 IPM43_13470 PF08281 Sigma-70, region 4 IPM43_13480 PF04314 Copper chaperone PCu(A)C IPM43_13490 PF02779 Transketolase, pyrimidine binding domain IPM43_13490 PF00676 Dehydrogenase E1 component IPM43_13490 PF16078 2-oxoglutarate dehydrogenase N-terminus IPM43_13490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IPM43_13490 PF16870 2-oxoglutarate dehydrogenase C-terminal IPM43_13505 PF03372 Endonuclease/Exonuclease/phosphatase family IPM43_13515 PF13361 UvrD-like helicase C-terminal domain IPM43_13515 PF00580 UvrD/REP helicase N-terminal domain IPM43_13520 PF13361 UvrD-like helicase C-terminal domain IPM43_13520 PF00580 UvrD/REP helicase N-terminal domain IPM43_13520 PF00570 HRDC domain IPM43_13540 PF00296 Luciferase-like monooxygenase IPM43_13545 PF12697 Alpha/beta hydrolase family IPM43_13550 PF02515 CoA-transferase family III IPM43_13555 PF02585 GlcNAc-PI de-N-acetylase IPM43_13575 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain IPM43_13575 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain IPM43_13585 PF00830 Ribosomal L28 family IPM43_13590 PF13684 Dihydroxyacetone kinase family IPM43_13590 PF02734 DAK2 domain IPM43_13595 PF00270 DEAD/DEAH box helicase IPM43_13595 PF00271 Helicase conserved C-terminal domain IPM43_13595 PF17191 RecG wedge domain IPM43_13610 PF01467 Cytidylyltransferase-like IPM43_13620 PF02620 Large ribosomal RNA subunit accumulation protein YceD IPM43_13625 PF01783 Ribosomal L32p protein family IPM43_13630 PF02504 Fatty acid synthesis protein IPM43_13635 PF00550 Phosphopantetheine attachment site IPM43_13640 PF00035 Double-stranded RNA binding motif IPM43_13640 PF14622 Ribonuclease-III-like IPM43_13645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IPM43_13645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IPM43_13645 PF06827 Zinc finger found in FPG and IleRS IPM43_13650 PF02463 RecF/RecN/SMC N terminal domain IPM43_13650 PF06470 SMC proteins Flexible Hinge Domain IPM43_13655 PF02881 SRP54-type protein, helical bundle domain IPM43_13655 PF00448 SRP54-type protein, GTPase domain IPM43_13665 PF00448 SRP54-type protein, GTPase domain IPM43_13665 PF02978 Signal peptide binding domain IPM43_13665 PF02881 SRP54-type protein, helical bundle domain IPM43_13670 PF00886 Ribosomal protein S16 IPM43_13680 PF01782 RimM N-terminal domain IPM43_13680 PF05239 PRC-barrel domain IPM43_13685 PF01746 tRNA (Guanine-1)-methyltransferase IPM43_13690 PF01245 Ribosomal protein L19 IPM43_13695 PF10611 Protein of unknown function (DUF2469) IPM43_13705 PF04116 Fatty acid hydroxylase superfamily IPM43_13710 PF02021 Uncharacterised protein family UPF0102 IPM43_13715 PF00378 Enoyl-CoA hydratase/isomerase IPM43_13725 PF00834 Ribulose-phosphate 3 epimerase family IPM43_13730 PF05958 tRNA (Uracil-5-)-methyltransferase IPM43_13735 PF04227 Indigoidine synthase A like protein IPM43_13745 PF00009 Elongation factor Tu GTP binding domain IPM43_13750 PF01507 Phosphoadenosine phosphosulfate reductase family IPM43_13755 PF02525 Flavodoxin-like fold IPM43_13760 PF02525 Flavodoxin-like fold IPM43_13780 PF00202 Aminotransferase class-III IPM43_13795 PF00154 recA bacterial DNA recombination protein IPM43_13835 PF04545 Sigma-70, region 4 IPM43_13835 PF04539 Sigma-70 region 3 IPM43_13835 PF04542 Sigma-70 region 2 IPM43_13850 PF13732 Domain of unknown function (DUF4162) IPM43_13850 PF00005 ABC transporter IPM43_13865 PF13847 Methyltransferase domain IPM43_13890 PF04545 Sigma-70, region 4 IPM43_13890 PF04539 Sigma-70 region 3 IPM43_13890 PF04542 Sigma-70 region 2 IPM43_13890 PF00140 Sigma-70 factor, region 1.2 IPM43_13910 PF00232 Glycosyl hydrolase family 1 IPM43_13915 PF00501 AMP-binding enzyme IPM43_13915 PF00975 Thioesterase domain IPM43_13915 PF00668 Condensation domain IPM43_13915 PF08241 Methyltransferase domain IPM43_13915 PF00391 PEP-utilising enzyme, mobile domain IPM43_13915 PF00550 Phosphopantetheine attachment site IPM43_13915 PF13193 AMP-binding enzyme C-terminal domain IPM43_13925 PF12146 Serine aminopeptidase, S33 IPM43_13935 PF00472 RF-1 domain IPM43_13945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IPM43_13945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IPM43_13950 PF00296 Luciferase-like monooxygenase IPM43_13955 PF00912 Transglycosylase IPM43_13955 PF00905 Penicillin binding protein transpeptidase domain IPM43_13975 PF10388 EAL-domain associated signalling protein domain IPM43_13975 PF00563 EAL domain IPM43_13995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IPM43_13995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IPM43_14005 PF01565 FAD binding domain IPM43_14005 PF02913 FAD linked oxidases, C-terminal domain IPM43_14010 PF01266 FAD dependent oxidoreductase IPM43_14010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IPM43_14025 PF02915 Rubrerythrin IPM43_14040 PF02467 Transcription factor WhiB IPM43_14045 PF00591 Glycosyl transferase family, a/b domain IPM43_14045 PF02885 Glycosyl transferase family, helical bundle domain IPM43_14050 PF00929 Exonuclease IPM43_14050 PF14480 DNA polymerase III polC-type N-terminus I IPM43_14050 PF02811 PHP domain IPM43_14050 PF07733 Bacterial DNA polymerase III alpha NTPase domain IPM43_14050 PF11490 DNA polymerase III polC-type N-terminus II IPM43_14050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IPM43_14050 PF14579 Helix-hairpin-helix motif IPM43_14095 PF13193 AMP-binding enzyme C-terminal domain IPM43_14095 PF00501 AMP-binding enzyme IPM43_14100 PF00561 alpha/beta hydrolase fold IPM43_14140 PF00196 Bacterial regulatory proteins, luxR family IPM43_14145 PF04055 Radical SAM superfamily IPM43_14150 PF11230 Protein of unknown function (DUF3029) IPM43_14170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_14170 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_14170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_14180 PF00289 Biotin carboxylase, N-terminal domain IPM43_14180 PF02785 Biotin carboxylase C-terminal domain IPM43_14180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPM43_14190 PF00817 impB/mucB/samB family IPM43_14190 PF11799 impB/mucB/samB family C-terminal domain IPM43_14195 PF03352 Methyladenine glycosylase IPM43_14205 PF04679 ATP dependent DNA ligase C terminal region IPM43_14205 PF01068 ATP dependent DNA ligase domain IPM43_14205 PF13298 DNA polymerase Ligase (LigD) IPM43_14210 PF13847 Methyltransferase domain IPM43_14215 PF00296 Luciferase-like monooxygenase IPM43_14225 PF00571 CBS domain IPM43_14250 PF13439 Glycosyltransferase Family 4 IPM43_14265 PF01300 Telomere recombination IPM43_14265 PF17788 HypF Kae1-like domain IPM43_14265 PF00708 Acylphosphatase IPM43_14265 PF07503 HypF finger IPM43_14270 PF01455 HupF/HypC family IPM43_14275 PF01924 Hydrogenase formation hypA family IPM43_14280 PF02769 AIR synthase related protein, C-terminal domain IPM43_14280 PF00586 AIR synthase related protein, N-terminal domain IPM43_14295 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 IPM43_14330 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_14330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_14330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_14335 PF00990 Diguanylate cyclase, GGDEF domain IPM43_14335 PF00563 EAL domain IPM43_14335 PF03707 Bacterial signalling protein N terminal repeat IPM43_14340 PF02562 PhoH-like protein IPM43_14345 PF02130 Uncharacterized protein family UPF0054 IPM43_14350 PF00571 CBS domain IPM43_14350 PF03471 Transporter associated domain IPM43_14350 PF01595 Cyclin M transmembrane N-terminal domain IPM43_14360 PF00501 AMP-binding enzyme IPM43_14360 PF13193 AMP-binding enzyme C-terminal domain IPM43_14365 PF01040 UbiA prenyltransferase family IPM43_14375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPM43_14375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IPM43_14375 PF16582 Middle domain of thiamine pyrophosphate IPM43_14380 PF00425 chorismate binding enzyme IPM43_14385 PF01209 ubiE/COQ5 methyltransferase family IPM43_14390 PF02770 Acyl-CoA dehydrogenase, middle domain IPM43_14390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPM43_14390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPM43_14395 PF00501 AMP-binding enzyme IPM43_14395 PF13193 AMP-binding enzyme C-terminal domain IPM43_14400 PF00296 Luciferase-like monooxygenase IPM43_14405 PF01575 MaoC like domain IPM43_14415 PF13193 AMP-binding enzyme C-terminal domain IPM43_14415 PF00501 AMP-binding enzyme IPM43_14420 PF01926 50S ribosome-binding GTPase IPM43_14420 PF07650 KH domain IPM43_14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPM43_14430 PF00672 HAMP domain IPM43_14430 PF00512 His Kinase A (phospho-acceptor) domain IPM43_14435 PF00486 Transcriptional regulatory protein, C terminal IPM43_14435 PF00072 Response regulator receiver domain IPM43_14445 PF13307 Helicase C-terminal domain IPM43_14450 PF01255 Putative undecaprenyl diphosphate synthase IPM43_14455 PF01255 Putative undecaprenyl diphosphate synthase IPM43_14460 PF11967 Recombination protein O N terminal IPM43_14460 PF02565 Recombination protein O C terminal IPM43_14465 PF03129 Anticodon binding domain IPM43_14465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IPM43_14470 PF00218 Indole-3-glycerol phosphate synthase IPM43_14475 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IPM43_14480 PF00291 Pyridoxal-phosphate dependent enzyme IPM43_14485 PF00290 Tryptophan synthase alpha chain IPM43_14500 PF00072 Response regulator receiver domain IPM43_14500 PF00196 Bacterial regulatory proteins, luxR family IPM43_14515 PF00578 AhpC/TSA family IPM43_14520 PF07977 FabA-like domain IPM43_14525 PF14864 Alkyl sulfatase C-terminal IPM43_14525 PF14863 Alkyl sulfatase dimerisation IPM43_14525 PF00753 Metallo-beta-lactamase superfamily IPM43_14530 PF00109 Beta-ketoacyl synthase, N-terminal domain IPM43_14530 PF02801 Beta-ketoacyl synthase, C-terminal domain IPM43_14535 PF00550 Phosphopantetheine attachment site IPM43_14545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPM43_14545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IPM43_14550 PF00698 Acyl transferase domain IPM43_14560 PF02446 4-alpha-glucanotransferase IPM43_14570 PF03861 ANTAR domain IPM43_14570 PF00072 Response regulator receiver domain IPM43_14575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IPM43_14575 PF01367 5'-3' exonuclease, C-terminal SAM fold IPM43_14575 PF00476 DNA polymerase family A IPM43_14580 PF08241 Methyltransferase domain IPM43_14585 PF00575 S1 RNA binding domain IPM43_14590 PF00196 Bacterial regulatory proteins, luxR family IPM43_14590 PF00072 Response regulator receiver domain IPM43_14595 PF07730 Histidine kinase IPM43_14595 PF17200 Single Cache domain 2 IPM43_14600 PF01121 Dephospho-CoA kinase IPM43_14605 PF04851 Type III restriction enzyme, res subunit IPM43_14605 PF00271 Helicase conserved C-terminal domain IPM43_14605 PF12344 Ultra-violet resistance protein B IPM43_14605 PF17757 UvrB interaction domain IPM43_14605 PF02151 UvrB/uvrC motif IPM43_14610 PF00005 ABC transporter IPM43_14610 PF17760 UvrA interaction domain IPM43_14610 PF17755 UvrA DNA-binding domain IPM43_14615 PF07690 Major Facilitator Superfamily IPM43_14620 PF08459 UvrC Helix-hairpin-helix N-terminal IPM43_14620 PF02151 UvrB/uvrC motif IPM43_14620 PF01541 GIY-YIG catalytic domain IPM43_14625 PF01209 ubiE/COQ5 methyltransferase family IPM43_14630 PF03668 P-loop ATPase protein family IPM43_14635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPM43_14635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IPM43_14640 PF00162 Phosphoglycerate kinase IPM43_14645 PF00121 Triosephosphate isomerase IPM43_14650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPM43_14655 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_14660 PF12911 N-terminal TM domain of oligopeptide transport permease C IPM43_14660 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_14665 PF00005 ABC transporter IPM43_14665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPM43_14670 PF00005 ABC transporter IPM43_14670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPM43_14680 PF03840 Preprotein translocase SecG subunit IPM43_14705 PF00072 Response regulator receiver domain IPM43_14705 PF00196 Bacterial regulatory proteins, luxR family IPM43_14720 PF00005 ABC transporter IPM43_14765 PF03992 Antibiotic biosynthesis monooxygenase IPM43_14775 PF02789 Cytosol aminopeptidase family, N-terminal domain IPM43_14775 PF00883 Cytosol aminopeptidase family, catalytic domain IPM43_14780 PF07690 Major Facilitator Superfamily IPM43_14785 PF10099 Anti-sigma-K factor rskA IPM43_14790 PF04545 Sigma-70, region 4 IPM43_14790 PF04542 Sigma-70 region 2 IPM43_14815 PF07687 Peptidase dimerisation domain IPM43_14815 PF01546 Peptidase family M20/M25/M40 IPM43_14820 PF00497 Bacterial extracellular solute-binding proteins, family 3 IPM43_14825 PF03605 Anaerobic c4-dicarboxylate membrane transporter IPM43_14850 PF06974 Protein of unknown function (DUF1298) IPM43_14850 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IPM43_14865 PF01113 Dihydrodipicolinate reductase, N-terminus IPM43_14875 PF00291 Pyridoxal-phosphate dependent enzyme IPM43_14880 PF16552 D-ornithine 4,5-aminomutase alpha-subunit IPM43_14885 PF02310 B12 binding domain IPM43_14885 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit IPM43_14885 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase IPM43_14890 PF01168 Alanine racemase, N-terminal domain IPM43_14895 PF00565 Staphylococcal nuclease homologue IPM43_14895 PF02872 5'-nucleotidase, C-terminal domain IPM43_14895 PF00746 LPXTG cell wall anchor motif IPM43_14895 PF00149 Calcineurin-like phosphoesterase IPM43_14900 PF01738 Dienelactone hydrolase family IPM43_14900 PF00156 Phosphoribosyl transferase domain IPM43_14905 PF02817 e3 binding domain IPM43_14905 PF00364 Biotin-requiring enzyme IPM43_14905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IPM43_14910 PF02779 Transketolase, pyrimidine binding domain IPM43_14910 PF02780 Transketolase, C-terminal domain IPM43_14915 PF00676 Dehydrogenase E1 component IPM43_14940 PF03781 Sulfatase-modifying factor enzyme 1 IPM43_14950 PF00067 Cytochrome P450 IPM43_14960 PF00884 Sulfatase IPM43_14965 PF01817 Chorismate mutase type II IPM43_14965 PF02153 Prephenate dehydrogenase IPM43_14975 PF00296 Luciferase-like monooxygenase IPM43_14980 PF00106 short chain dehydrogenase IPM43_14990 PF01039 Carboxyl transferase domain IPM43_15000 PF01268 Formate--tetrahydrofolate ligase IPM43_15010 PF04055 Radical SAM superfamily IPM43_15020 PF00696 Amino acid kinase family IPM43_15030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IPM43_15030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IPM43_15035 PF00111 2Fe-2S iron-sulfur cluster binding domain IPM43_15035 PF01799 [2Fe-2S] binding domain IPM43_15045 PF00296 Luciferase-like monooxygenase IPM43_15050 PF01979 Amidohydrolase family IPM43_15055 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IPM43_15055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IPM43_15065 PF00795 Carbon-nitrogen hydrolase IPM43_15070 PF01546 Peptidase family M20/M25/M40 IPM43_15070 PF07687 Peptidase dimerisation domain IPM43_15075 PF00202 Aminotransferase class-III IPM43_15090 PF16123 Hydroxyacylglutathione hydrolase C-terminus IPM43_15090 PF00753 Metallo-beta-lactamase superfamily IPM43_15095 PF00171 Aldehyde dehydrogenase family IPM43_15105 PF01266 FAD dependent oxidoreductase IPM43_15110 PF02569 Pantoate-beta-alanine ligase IPM43_15115 PF03576 Peptidase family S58 IPM43_15120 PF00132 Bacterial transferase hexapeptide (six repeats) IPM43_15135 PF00005 ABC transporter IPM43_15135 PF00664 ABC transporter transmembrane region IPM43_15140 PF00664 ABC transporter transmembrane region IPM43_15140 PF00005 ABC transporter IPM43_15155 PF00300 Histidine phosphatase superfamily (branch 1) IPM43_15160 PF00171 Aldehyde dehydrogenase family IPM43_15190 PF02628 Cytochrome oxidase assembly protein IPM43_15195 PF03060 Nitronate monooxygenase IPM43_15200 PF00892 EamA-like transporter family IPM43_15205 PF02653 Branched-chain amino acid transport system / permease component IPM43_15210 PF11862 Domain of unknown function (DUF3382) IPM43_15210 PF02653 Branched-chain amino acid transport system / permease component IPM43_15215 PF12399 Branched-chain amino acid ATP-binding cassette transporter IPM43_15215 PF00005 ABC transporter IPM43_15220 PF00005 ABC transporter IPM43_15225 PF13458 Periplasmic binding protein IPM43_15230 PF00378 Enoyl-CoA hydratase/isomerase IPM43_15235 PF01556 DnaJ C terminal domain IPM43_15235 PF00684 DnaJ central domain IPM43_15235 PF00226 DnaJ domain IPM43_15240 PF01300 Telomere recombination IPM43_15250 PF00571 CBS domain IPM43_15250 PF00478 IMP dehydrogenase / GMP reductase domain IPM43_15255 PF02569 Pantoate-beta-alanine ligase IPM43_15255 PF02224 Cytidylate kinase IPM43_15265 PF02127 Aminopeptidase I zinc metalloprotease (M18) IPM43_15270 PF00300 Histidine phosphatase superfamily (branch 1) IPM43_15275 PF00391 PEP-utilising enzyme, mobile domain IPM43_15275 PF00224 Pyruvate kinase, barrel domain IPM43_15275 PF02887 Pyruvate kinase, alpha/beta domain IPM43_15290 PF12804 MobA-like NTP transferase domain IPM43_15295 PF00581 Rhodanese-like domain IPM43_15300 PF01612 3'-5' exonuclease IPM43_15300 PF00570 HRDC domain IPM43_15310 PF13614 AAA domain IPM43_15315 PF00128 Alpha amylase, catalytic domain IPM43_15325 PF14492 Elongation Factor G, domain II IPM43_15325 PF00679 Elongation factor G C-terminus IPM43_15325 PF03144 Elongation factor Tu domain 2 IPM43_15325 PF00009 Elongation factor Tu GTP binding domain IPM43_15335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPM43_15335 PF02272 DHHA1 domain IPM43_15335 PF01411 tRNA synthetases class II (A) IPM43_15340 PF03652 Holliday junction resolvase IPM43_15345 PF02618 YceG-like family IPM43_15350 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IPM43_15350 PF08501 Shikimate dehydrogenase substrate binding domain IPM43_15350 PF01488 Shikimate / quinate 5-dehydrogenase IPM43_15355 PF01264 Chorismate synthase IPM43_15360 PF01202 Shikimate kinase IPM43_15365 PF01761 3-dehydroquinate synthase IPM43_15370 PF01220 Dehydroquinase class II IPM43_15375 PF00557 Metallopeptidase family M24 IPM43_15375 PF01321 Creatinase/Prolidase N-terminal domain IPM43_15380 PF01132 Elongation factor P (EF-P) OB domain IPM43_15380 PF08207 Elongation factor P (EF-P) KOW-like domain IPM43_15380 PF09285 Elongation factor P, C-terminal IPM43_15385 PF01029 NusB family IPM43_15395 PF00156 Phosphoribosyl transferase domain IPM43_15400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPM43_15400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPM43_15405 PF01979 Amidohydrolase family IPM43_15410 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IPM43_15410 PF00117 Glutamine amidotransferase class-I IPM43_15415 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IPM43_15415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPM43_15415 PF02142 MGS-like domain IPM43_15420 PF01180 Dihydroorotate dehydrogenase IPM43_15430 PF00625 Guanylate kinase IPM43_15435 PF01192 RNA polymerase Rpb6 IPM43_15440 PF02441 Flavoprotein IPM43_15440 PF04127 DNA / pantothenate metabolism flavoprotein IPM43_15445 PF00438 S-adenosylmethionine synthetase, N-terminal domain IPM43_15445 PF02772 S-adenosylmethionine synthetase, central domain IPM43_15445 PF02773 S-adenosylmethionine synthetase, C-terminal domain IPM43_15450 PF17764 3′ DNA-binding domain (3′BD) IPM43_15455 PF08468 Methyltransferase small domain N-terminal IPM43_15455 PF05175 Methyltransferase small domain IPM43_15460 PF01327 Polypeptide deformylase IPM43_15465 PF00551 Formyl transferase IPM43_15465 PF02911 Formyl transferase, C-terminal domain IPM43_15470 PF01189 16S rRNA methyltransferase RsmB/F IPM43_15470 PF01029 NusB family IPM43_15475 PF00994 Probable molybdopterin binding domain IPM43_15480 PF01634 ATP phosphoribosyltransferase IPM43_15480 PF08029 HisG, C-terminal domain IPM43_15500 PF05198 Translation initiation factor IF-3, N-terminal domain IPM43_15500 PF00707 Translation initiation factor IF-3, C-terminal domain IPM43_15505 PF01632 Ribosomal protein L35 IPM43_15510 PF00453 Ribosomal protein L20 IPM43_15515 PF00588 SpoU rRNA Methylase family IPM43_15515 PF08032 RNA 2'-O ribose methyltransferase substrate binding IPM43_15520 PF01409 tRNA synthetases class II core domain (F) IPM43_15520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IPM43_15525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IPM43_15525 PF03147 Ferredoxin-fold anticodon binding domain IPM43_15525 PF01588 Putative tRNA binding domain IPM43_15525 PF03484 tRNA synthetase B5 domain IPM43_15525 PF03483 B3/4 domain IPM43_15530 PF02622 Uncharacterized ACR, COG1678 IPM43_15535 PF01118 Semialdehyde dehydrogenase, NAD binding domain IPM43_15535 PF02774 Semialdehyde dehydrogenase, dimerisation domain IPM43_15540 PF00696 Amino acid kinase family IPM43_15545 PF00202 Aminotransferase class-III IPM43_15550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPM43_15550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPM43_15555 PF02863 Arginine repressor, C-terminal domain IPM43_15555 PF01316 Arginine repressor, DNA binding domain IPM43_15560 PF14698 Argininosuccinate lyase C-terminal IPM43_15560 PF00206 Lyase IPM43_15565 PF01914 MarC family integral membrane protein IPM43_15570 PF02245 Methylpurine-DNA glycosylase (MPG) IPM43_15575 PF00579 tRNA synthetases class I (W and Y) IPM43_15575 PF01479 S4 domain IPM43_15605 PF01791 DeoC/LacD family aldolase IPM43_15610 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IPM43_15610 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IPM43_15610 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IPM43_15615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPM43_15625 PF18407 GCN5-related N-acetyltransferase like domain IPM43_15625 PF13344 Haloacid dehalogenase-like hydrolase IPM43_15630 PF01728 FtsJ-like methyltransferase IPM43_15630 PF01479 S4 domain IPM43_15635 PF01513 ATP-NAD kinase IPM43_15640 PF02463 RecF/RecN/SMC N terminal domain IPM43_15645 PF00117 Glutamine amidotransferase class-I IPM43_15645 PF06418 CTP synthase N-terminus IPM43_15650 PF00293 NUDIX domain IPM43_15655 PF00589 Phage integrase family IPM43_15655 PF02899 Phage integrase, N-terminal SAM-like domain IPM43_15665 PF00579 tRNA synthetases class I (W and Y) IPM43_15670 PF02616 Segregation and condensation protein ScpA IPM43_15675 PF04079 Segregation and condensation complex subunit ScpB IPM43_15680 PF01479 S4 domain IPM43_15680 PF00849 RNA pseudouridylate synthase IPM43_15685 PF02153 Prephenate dehydrogenase IPM43_15685 PF01842 ACT domain IPM43_15690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IPM43_15700 PF01040 UbiA prenyltransferase family IPM43_15705 PF00534 Glycosyl transferases group 1 IPM43_15710 PF04030 D-arabinono-1,4-lactone oxidase IPM43_15710 PF01565 FAD binding domain IPM43_15715 PF00106 short chain dehydrogenase IPM43_15740 PF00535 Glycosyl transferase family 2 IPM43_15745 PF00535 Glycosyl transferase family 2 IPM43_15760 PF01757 Acyltransferase family IPM43_15775 PF00378 Enoyl-CoA hydratase/isomerase IPM43_15785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPM43_15785 PF00005 ABC transporter IPM43_15790 PF00005 ABC transporter IPM43_15790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPM43_15795 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_15795 PF12911 N-terminal TM domain of oligopeptide transport permease C IPM43_15800 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_15805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPM43_15810 PF03976 Polyphosphate kinase 2 (PPK2) IPM43_15820 PF02163 Peptidase family M50 IPM43_15820 PF00571 CBS domain IPM43_15830 PF02633 Creatinine amidohydrolase IPM43_15840 PF00528 Binding-protein-dependent transport system inner membrane component IPM43_15845 PF00005 ABC transporter IPM43_15850 PF01329 Pterin 4 alpha carbinolamine dehydratase IPM43_15860 PF00296 Luciferase-like monooxygenase IPM43_15870 PF01565 FAD binding domain IPM43_15870 PF02913 FAD linked oxidases, C-terminal domain IPM43_15875 PF03009 Glycerophosphoryl diester phosphodiesterase family IPM43_15880 PF00171 Aldehyde dehydrogenase family