locus-tag	class	description
AGRA3207_000003	COG3973	AAA domain
AGRA3207_000006	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AGRA3207_000007	COG0563	adenylate kinase activity
AGRA3207_000014	COG3485	protocatechuate 3,4-dioxygenase
AGRA3207_000015	COG3485	protocatechuate 3,4-dioxygenase
AGRA3207_000016	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AGRA3207_000021	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AGRA3207_000021	COG0189	ligase activity
AGRA3207_000023	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AGRA3207_000025	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
AGRA3207_000027	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AGRA3207_000028	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AGRA3207_000031	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AGRA3207_000032	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AGRA3207_000034	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGRA3207_000036	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_000037	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AGRA3207_000037	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AGRA3207_000038	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AGRA3207_000039	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_000041	COG0859	PFAM glycosyl transferase family 9
AGRA3207_000042	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AGRA3207_000043	COG2192	nodulation
AGRA3207_000046	COG0655	NAD(P)H dehydrogenase (quinone) activity
AGRA3207_000047	COG0477	Major facilitator Superfamily
AGRA3207_000049	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_000049	COG2030	dehydratase
AGRA3207_000051	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_000052	COG0022	dehydrogenase e1 component
AGRA3207_000058	COG1116	anion transmembrane transporter activity
AGRA3207_000059	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_000066	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AGRA3207_000069	COG2188	Transcriptional regulator
AGRA3207_000073	COG0702	epimerase
AGRA3207_000078	COG1595	DNA-templated transcription, initiation
AGRA3207_000079	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AGRA3207_000086	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AGRA3207_000088	COG4585	Histidine kinase
AGRA3207_000091	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AGRA3207_000095	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGRA3207_000096	COG1280	lysine exporter protein (LysE YggA)
AGRA3207_000100	COG1716	ATPase activity
AGRA3207_000105	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AGRA3207_000105	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AGRA3207_000109	COG0247	lactate metabolic process
AGRA3207_000110	COG1139	Iron-sulfur cluster binding protein
AGRA3207_000111	COG1556	Lactate utilization protein
AGRA3207_000121	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AGRA3207_000121	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AGRA3207_000127	COG4948	Mandelate Racemase Muconate Lactonizing
AGRA3207_000128	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AGRA3207_000130	COG3239	Fatty acid desaturase
AGRA3207_000133	COG1169	isochorismate synthase
AGRA3207_000136	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGRA3207_000138	COG0640	Transcriptional regulator
AGRA3207_000143	COG0697	spore germination
AGRA3207_000144	COG1846	Transcriptional regulator
AGRA3207_000145	COG0667	Aldo Keto reductase
AGRA3207_000147	COG1649	PFAM Uncharacterised BCR, COG1649
AGRA3207_000152	COG5006	permease, DMT superfamily
AGRA3207_000158	COG4941	Belongs to the sigma-70 factor family
AGRA3207_000159	COG3795	YCII-related domain
AGRA3207_000162	COG1472	Belongs to the glycosyl hydrolase 3 family
AGRA3207_000188	COG0270	DNA (cytosine-5-)-methyltransferase activity
AGRA3207_000219	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AGRA3207_000220	COG1295	ribonuclease BN
AGRA3207_000223	COG2197	response regulator
AGRA3207_000224	COG4585	Histidine kinase
AGRA3207_000228	COG4257	antibiotic catabolic process
AGRA3207_000237	COG0789	Transcriptional regulator
AGRA3207_000239	COG1309	transcriptional regulator
AGRA3207_000241	COG3485	protocatechuate 3,4-dioxygenase
AGRA3207_000247	COG1595	DNA-templated transcription, initiation
AGRA3207_000257	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_000261	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AGRA3207_000262	COG2807	transmembrane transport
AGRA3207_000265	COG1733	regulation of RNA biosynthetic process
AGRA3207_000284	COG4974	Belongs to the 'phage' integrase family
AGRA3207_000289	COG0640	Transcriptional regulator
AGRA3207_000291	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AGRA3207_000292	COG1247	-acetyltransferase
AGRA3207_000302	COG0702	epimerase
AGRA3207_000303	COG3631	Ketosteroid isomerase-related protein
AGRA3207_000304	COG3642	lipopolysaccharide core region biosynthetic process
AGRA3207_000308	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AGRA3207_000311	COG0590	tRNA wobble adenosine to inosine editing
AGRA3207_000312	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AGRA3207_000313	COG2111	Na H antiporter
AGRA3207_000313	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AGRA3207_000329	COG0657	acetylesterase activity
AGRA3207_000335	COG0477	Major facilitator Superfamily
AGRA3207_000348	COG2130	NADP-dependent
AGRA3207_000349	COG4566	intracellular signal transduction
AGRA3207_000354	COG1162	GTPase activity
AGRA3207_000356	COG0745	RESPONSE REGULATOR receiver
AGRA3207_000358	COG0300	oxidoreductase activity
AGRA3207_000361	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AGRA3207_000362	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AGRA3207_000362	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AGRA3207_000363	COG2154	pterin-4-alpha-carbinolamine dehydratase
AGRA3207_000366	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AGRA3207_000386	COG1739	Uncharacterized protein family UPF0029
AGRA3207_000389	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AGRA3207_000395	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AGRA3207_000396	COG1595	DNA-templated transcription, initiation
AGRA3207_000397	COG2197	response regulator
AGRA3207_000405	COG4974	Belongs to the 'phage' integrase family
AGRA3207_000414	COG0714	Associated with various cellular activities
AGRA3207_000416	COG2304	oxidoreductase activity
AGRA3207_000417	COG2813	Specifically methylates the guanine in position
AGRA3207_000418	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AGRA3207_000419	COG0477	Major facilitator Superfamily
AGRA3207_000425	COG2197	response regulator
AGRA3207_000426	COG4585	Histidine kinase
AGRA3207_000427	COG0657	acetylesterase activity
AGRA3207_000429	COG0740	serine-type endopeptidase activity
AGRA3207_000430	COG0740	serine-type endopeptidase activity
AGRA3207_000433	COG4585	Histidine kinase
AGRA3207_000437	COG3030	protein affecting phage T7 exclusion by the F plasmid
AGRA3207_000438	COG1216	Glycosyl transferase, family 2
AGRA3207_000440	COG1607	acyl-coa hydrolase
AGRA3207_000441	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AGRA3207_000442	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AGRA3207_000449	COG0604	alcohol dehydrogenase
AGRA3207_000450	COG1509	lysine 2,3-aminomutase activity
AGRA3207_000451	COG2124	cytochrome p450
AGRA3207_000454	COG1940	carbohydrate kinase activity
AGRA3207_000456	COG1175	transmembrane transport
AGRA3207_000457	COG0395	ABC-type sugar transport system, permease component
AGRA3207_000458	COG1486	melibiose metabolic process
AGRA3207_000463	COG1522	sequence-specific DNA binding
AGRA3207_000464	COG1609	Transcriptional regulator
AGRA3207_000468	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AGRA3207_000469	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGRA3207_000471	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AGRA3207_000473	COG0028	Belongs to the TPP enzyme family
AGRA3207_000476	COG1131	(ABC) transporter
AGRA3207_000481	COG0805	protein transport
AGRA3207_000482	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AGRA3207_000490	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AGRA3207_000491	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AGRA3207_000492	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AGRA3207_000495	COG4122	O-methyltransferase activity
AGRA3207_000496	COG1222	aaa ATPase
AGRA3207_000498	COG0517	IMP dehydrogenase activity
AGRA3207_000498	COG1994	Peptidase M50
AGRA3207_000500	COG4585	Histidine kinase
AGRA3207_000501	COG2197	response regulator
AGRA3207_000502	COG1136	(ABC) transporter
AGRA3207_000503	COG0577	efflux transmembrane transporter activity
AGRA3207_000506	COG4608	Belongs to the ABC transporter superfamily
AGRA3207_000508	COG0601	transmembrane transport
AGRA3207_000509	COG0747	negative chemotaxis
AGRA3207_000515	COG0215	cysteine-tRNA ligase activity
AGRA3207_000522	COG0598	Magnesium transport protein CorA
AGRA3207_000533	COG1968	undecaprenyl-diphosphatase activity
AGRA3207_000534	COG0667	Aldo Keto reductase
AGRA3207_000537	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_000540	COG3360	Dodecin
AGRA3207_000544	COG1703	isobutyryl-CoA mutase activity
AGRA3207_000544	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AGRA3207_000544	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AGRA3207_000545	COG1846	Transcriptional regulator
AGRA3207_000547	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGRA3207_000551	COG0746	molybdenum cofactor guanylyltransferase activity
AGRA3207_000552	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AGRA3207_000553	COG2267	carboxylic ester hydrolase activity
AGRA3207_000560	COG1690	Belongs to the RtcB family
AGRA3207_000565	COG0709	Synthesizes selenophosphate from selenide and ATP
AGRA3207_000573	COG2860	membrane
AGRA3207_000574	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AGRA3207_000578	COG0516	GMP reductase activity
AGRA3207_000578	COG0517	IMP dehydrogenase activity
AGRA3207_000579	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGRA3207_000581	COG1929	Belongs to the glycerate kinase type-1 family
AGRA3207_000583	COG1619	proteins homologs of microcin C7 resistance protein MccF
AGRA3207_000585	COG1132	(ABC) transporter
AGRA3207_000586	COG2936	dipeptidyl-peptidase activity
AGRA3207_000589	COG0488	(ABC) transporter
AGRA3207_000597	COG4585	Histidine kinase
AGRA3207_000599	COG2151	metal-sulfur cluster biosynthetic enzyme
AGRA3207_000600	COG0822	iron-sulfur transferase activity
AGRA3207_000601	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AGRA3207_000602	COG0396	ATPase activity
AGRA3207_000604	COG0719	Fe-S assembly protein
AGRA3207_000608	COG0531	amino acid
AGRA3207_000609	COG0549	Belongs to the carbamate kinase family
AGRA3207_000610	COG1131	(ABC) transporter
AGRA3207_000613	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AGRA3207_000614	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AGRA3207_000614	COG1796	DNA polymerase
AGRA3207_000615	COG1612	heme a metabolic process
AGRA3207_000617	COG0109	protoheme IX farnesyltransferase activity
AGRA3207_000619	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AGRA3207_000620	COG0166	Belongs to the GPI family
AGRA3207_000621	COG0166	Belongs to the GPI family
AGRA3207_000625	COG0363	glucosamine-6-phosphate deaminase activity
AGRA3207_000626	COG1376	ErfK ybiS ycfS ynhG family protein
AGRA3207_000627	COG0596	Alpha beta hydrolase
AGRA3207_000629	COG2197	response regulator
AGRA3207_000632	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AGRA3207_000639	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AGRA3207_000641	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AGRA3207_000642	COG0149	triose-phosphate isomerase activity
AGRA3207_000643	COG0126	phosphoglycerate kinase activity
AGRA3207_000644	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AGRA3207_000645	COG1481	regulation of sporulation
AGRA3207_000646	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AGRA3207_000647	COG1660	Displays ATPase and GTPase activities
AGRA3207_000648	COG0322	excinuclease ABC activity
AGRA3207_000652	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AGRA3207_000655	COG3629	intracellular signal transduction
AGRA3207_000655	COG3903	Transcriptional regulator
AGRA3207_000658	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AGRA3207_000662	COG0477	Major facilitator Superfamily
AGRA3207_000668	COG0477	Major facilitator Superfamily
AGRA3207_000670	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_000677	COG0497	DNA recombination
AGRA3207_000678	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AGRA3207_000682	COG0647	UMP catabolic process
AGRA3207_000685	COG2816	NAD+ diphosphatase activity
AGRA3207_000693	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AGRA3207_000694	COG2094	Belongs to the DNA glycosylase MPG family
AGRA3207_000695	COG0165	Argininosuccinate lyase
AGRA3207_000696	COG0137	argininosuccinate synthase activity
AGRA3207_000697	COG1438	arginine binding
AGRA3207_000698	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AGRA3207_000700	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AGRA3207_000701	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AGRA3207_000702	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AGRA3207_000704	COG1131	(ABC) transporter
AGRA3207_000708	COG0488	(ABC) transporter
AGRA3207_000709	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AGRA3207_000709	COG0072	phenylalanine-tRNA ligase activity
AGRA3207_000710	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AGRA3207_000711	COG5002	protein histidine kinase activity
AGRA3207_000712	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_000713	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AGRA3207_000714	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AGRA3207_000716	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AGRA3207_000721	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AGRA3207_000722	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AGRA3207_000723	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AGRA3207_000724	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AGRA3207_000733	COG1196	nuclear chromosome segregation
AGRA3207_000734	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AGRA3207_000736	COG0124	histidyl-tRNA synthetase
AGRA3207_000737	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AGRA3207_000738	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AGRA3207_000739	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AGRA3207_000740	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AGRA3207_000741	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AGRA3207_000743	COG2255	four-way junction helicase activity
AGRA3207_000744	COG0632	four-way junction helicase activity
AGRA3207_000745	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AGRA3207_000746	COG0217	transcriptional regulatory protein
AGRA3207_000747	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
AGRA3207_000749	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
AGRA3207_000752	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_000753	COG1560	Kdo2-lipid A biosynthetic process
AGRA3207_000754	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AGRA3207_000756	COG0726	polysaccharide deacetylase
AGRA3207_000761	COG1302	Protein conserved in bacteria
AGRA3207_000763	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AGRA3207_000764	COG0477	Major facilitator Superfamily
AGRA3207_000767	COG4585	Histidine kinase
AGRA3207_000768	COG2197	response regulator
AGRA3207_000770	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_000772	COG1940	carbohydrate kinase activity
AGRA3207_000774	COG1278	Cold shock
AGRA3207_000775	COG3844	kynureninase activity
AGRA3207_000777	COG1917	Cupin 2, conserved barrel domain protein
AGRA3207_000780	COG3971	2-oxopent-4-enoate hydratase activity
AGRA3207_000782	COG0583	DNA-binding transcription factor activity
AGRA3207_000793	COG4585	Histidine kinase
AGRA3207_000798	COG4608	Belongs to the ABC transporter superfamily
AGRA3207_000799	COG0444	Belongs to the ABC transporter superfamily
AGRA3207_000800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGRA3207_000801	COG0601	transmembrane transport
AGRA3207_000802	COG4166	transmembrane transport
AGRA3207_000803	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGRA3207_000806	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGRA3207_000816	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGRA3207_000817	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_000818	COG2188	Transcriptional regulator
AGRA3207_000821	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AGRA3207_000831	COG0673	inositol 2-dehydrogenase activity
AGRA3207_000833	COG1169	isochorismate synthase
AGRA3207_000834	COG3835	regulator
AGRA3207_000844	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AGRA3207_000854	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_000856	COG0383	alpha-mannosidase activity
AGRA3207_000858	COG3842	ATPase activity
AGRA3207_000859	COG0395	ABC-type sugar transport system, permease component
AGRA3207_000860	COG1175	transmembrane transport
AGRA3207_000861	COG2182	Extracellular solute-binding protein
AGRA3207_000862	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AGRA3207_000864	COG0640	Transcriptional regulator
AGRA3207_000885	COG0076	glutamate decarboxylase activity
AGRA3207_000893	COG3962	Belongs to the TPP enzyme family
AGRA3207_000894	COG3718	enzyme involved in inositol metabolism
AGRA3207_000897	COG1082	Xylose isomerase domain protein TIM barrel
AGRA3207_000898	COG0673	inositol 2-dehydrogenase activity
AGRA3207_000899	COG2188	Transcriptional regulator
AGRA3207_000901	COG0395	ABC-type sugar transport system, permease component
AGRA3207_000902	COG1175	transmembrane transport
AGRA3207_000905	COG1486	melibiose metabolic process
AGRA3207_000906	COG1349	DNA-binding transcription factor activity
AGRA3207_000908	COG0745	RESPONSE REGULATOR receiver
AGRA3207_000909	COG0475	glutathione-regulated potassium exporter activity
AGRA3207_000912	COG0492	ferredoxin-NADP+ reductase activity
AGRA3207_000913	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_000924	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_000927	COG0437	4 iron, 4 sulfur cluster binding
AGRA3207_000931	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AGRA3207_000934	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGRA3207_000936	COG3485	protocatechuate 3,4-dioxygenase
AGRA3207_000942	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
AGRA3207_000946	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AGRA3207_000949	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AGRA3207_000951	COG0640	Transcriptional regulator
AGRA3207_000956	COG2318	DinB family
AGRA3207_000960	COG2353	YceI-like domain
AGRA3207_000970	COG3591	Belongs to the peptidase S1B family
AGRA3207_000970	COG1864	DNA RNA non-specific endonuclease
AGRA3207_000972	COG0463	Glycosyl transferase, family 2
AGRA3207_000974	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AGRA3207_000975	COG0583	DNA-binding transcription factor activity
AGRA3207_000993	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AGRA3207_000995	COG1414	Transcriptional regulator
AGRA3207_000996	COG3971	2-oxopent-4-enoate hydratase activity
AGRA3207_001004	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_001014	COG1271	oxidase subunit
AGRA3207_001019	COG0366	Alpha amylase catalytic
AGRA3207_001021	COG0366	Alpha amylase catalytic
AGRA3207_001023	COG0791	NLP P60 protein
AGRA3207_001023	COG1388	LysM domain
AGRA3207_001024	COG0667	Aldo Keto reductase
AGRA3207_001026	COG2124	cytochrome p450
AGRA3207_001027	COG1657	PFAM Prenyltransferase squalene oxidase
AGRA3207_001029	COG0142	geranyltranstransferase activity
AGRA3207_001031	COG1077	Cell shape determining protein MreB Mrl
AGRA3207_001035	COG4715	Zinc finger, swim domain protein
AGRA3207_001036	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AGRA3207_001037	COG2425	protein containing a von Willebrand factor type A (vWA) domain
AGRA3207_001038	COG0714	Associated with various cellular activities
AGRA3207_001040	COG3831	ATPase activity
AGRA3207_001041	COG0446	pyridine nucleotide-disulphide oxidoreductase
AGRA3207_001043	COG0174	glutamine synthetase
AGRA3207_001049	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AGRA3207_001051	COG0235	Class ii aldolase
AGRA3207_001051	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AGRA3207_001054	COG0587	DNA-directed DNA polymerase activity
AGRA3207_001055	COG0726	polysaccharide deacetylase
AGRA3207_001057	COG2409	Drug exporters of the RND superfamily
AGRA3207_001058	COG0248	Ppx GppA phosphatase
AGRA3207_001061	COG0584	glycerophosphoryl diester phosphodiesterase
AGRA3207_001062	COG3540	Alkaline phosphatase
AGRA3207_001065	COG0656	L-ascorbic acid biosynthetic process
AGRA3207_001067	COG0531	amino acid
AGRA3207_001070	COG0247	lactate metabolic process
AGRA3207_001071	COG1139	Iron-sulfur cluster binding protein
AGRA3207_001072	COG1556	Lactate utilization protein
AGRA3207_001079	COG3467	pyridoxamine 5'-phosphate
AGRA3207_001087	COG1643	Atp-dependent helicase
AGRA3207_001091	COG0588	phosphoglycerate mutase activity
AGRA3207_001092	COG3284	Transcriptional regulator
AGRA3207_001100	COG2755	lipolytic protein G-D-S-L family
AGRA3207_001102	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AGRA3207_001107	COG3903	Transcriptional regulator
AGRA3207_001107	COG3629	intracellular signal transduction
AGRA3207_001108	COG0477	Major facilitator Superfamily
AGRA3207_001112	COG0204	Acyl-transferase
AGRA3207_001112	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_001117	COG0668	transmembrane transport
AGRA3207_001121	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_001122	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_001122	COG1672	PFAM Archaeal ATPase
AGRA3207_001123	COG0515	serine threonine protein kinase
AGRA3207_001125	COG1132	(ABC) transporter
AGRA3207_001127	COG2197	response regulator
AGRA3207_001138	COG0443	Heat shock 70 kDa protein
AGRA3207_001143	COG2814	Major facilitator Superfamily
AGRA3207_001147	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGRA3207_001153	COG3473	Maleate cis-trans isomerase
AGRA3207_001156	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AGRA3207_001160	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AGRA3207_001162	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AGRA3207_001166	COG0714	Associated with various cellular activities
AGRA3207_001167	COG2425	protein containing a von Willebrand factor type A (vWA) domain
AGRA3207_001168	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AGRA3207_001171	COG0640	Transcriptional regulator
AGRA3207_001174	COG1597	lipid kinase activity
AGRA3207_001179	COG0667	Aldo Keto reductase
AGRA3207_001183	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AGRA3207_001184	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AGRA3207_001188	COG0419	ATPase involved in DNA repair
AGRA3207_001189	COG0420	3'-5' exonuclease activity
AGRA3207_001190	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AGRA3207_001190	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AGRA3207_001193	COG1021	2,3-dihydroxybenzoate-AMP ligase
AGRA3207_001194	COG2197	response regulator
AGRA3207_001202	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGRA3207_001206	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AGRA3207_001214	COG0372	Belongs to the citrate synthase family
AGRA3207_001218	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AGRA3207_001219	COG0386	Belongs to the glutathione peroxidase family
AGRA3207_001223	COG1316	TRANSCRIPTIONal
AGRA3207_001224	COG1132	(ABC) transporter
AGRA3207_001227	COG1032	radical SAM domain protein
AGRA3207_001234	COG2018	Roadblock/LC7 domain
AGRA3207_001235	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AGRA3207_001238	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_001240	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AGRA3207_001241	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AGRA3207_001241	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AGRA3207_001244	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AGRA3207_001248	COG0277	FAD linked oxidase domain protein
AGRA3207_001259	COG0175	sulfate reduction
AGRA3207_001271	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AGRA3207_001271	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AGRA3207_001273	COG1793	dna ligase
AGRA3207_001274	COG3540	Alkaline phosphatase
AGRA3207_001276	COG3119	arylsulfatase activity
AGRA3207_001278	COG2936	dipeptidyl-peptidase activity
AGRA3207_001280	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AGRA3207_001283	COG3253	May function as heme-dependent peroxidase
AGRA3207_001284	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
AGRA3207_001286	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AGRA3207_001290	COG0672	)-iron permease
AGRA3207_001292	COG1136	(ABC) transporter
AGRA3207_001292	COG0577	efflux transmembrane transporter activity
AGRA3207_001293	COG0577	efflux transmembrane transporter activity
AGRA3207_001293	COG1136	(ABC) transporter
AGRA3207_001297	COG1309	transcriptional regulator
AGRA3207_001299	COG0745	RESPONSE REGULATOR receiver
AGRA3207_001300	COG2205	protein histidine kinase activity
AGRA3207_001301	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_001302	COG0183	Belongs to the thiolase family
AGRA3207_001303	COG1024	Enoyl-CoA hydratase
AGRA3207_001303	COG1250	3-hydroxyacyl-CoA dehydrogenase
AGRA3207_001304	COG0531	amino acid
AGRA3207_001307	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AGRA3207_001308	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AGRA3207_001310	COG1175	transmembrane transport
AGRA3207_001311	COG0395	ABC-type sugar transport system, permease component
AGRA3207_001315	COG0667	Aldo Keto reductase
AGRA3207_001317	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AGRA3207_001320	COG1562	ergosterol biosynthetic process
AGRA3207_001322	COG1233	COG1233 Phytoene dehydrogenase and related
AGRA3207_001324	COG1657	PFAM Prenyltransferase squalene oxidase
AGRA3207_001329	COG0583	DNA-binding transcription factor activity
AGRA3207_001331	COG0800	Aldolase
AGRA3207_001340	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_001344	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AGRA3207_001344	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AGRA3207_001345	COG1653	transport
AGRA3207_001346	COG0366	Alpha amylase catalytic
AGRA3207_001347	COG4336	lyase activity
AGRA3207_001348	COG1914	H( )-stimulated, divalent metal cation uptake system
AGRA3207_001349	COG2188	Transcriptional regulator
AGRA3207_001350	COG1802	Transcriptional regulator
AGRA3207_001351	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AGRA3207_001352	COG0022	dehydrogenase e1 component
AGRA3207_001353	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGRA3207_001358	COG1940	carbohydrate kinase activity
AGRA3207_001358	COG1846	Transcriptional regulator
AGRA3207_001369	COG2188	Transcriptional regulator
AGRA3207_001384	COG2318	DinB family
AGRA3207_001385	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_001388	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AGRA3207_001389	COG2226	methyltransferase
AGRA3207_001392	COG0477	Major facilitator Superfamily
AGRA3207_001401	COG4552	Acetyltransferase involved in intracellular survival and related
AGRA3207_001410	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AGRA3207_001411	COG0531	amino acid
AGRA3207_001412	COG0569	domain protein
AGRA3207_001417	COG1376	ErfK ybiS ycfS ynhG family protein
AGRA3207_001418	COG0384	phenazine biosynthesis protein PhzF
AGRA3207_001419	COG0728	peptidoglycan biosynthetic process
AGRA3207_001423	COG1136	(ABC) transporter
AGRA3207_001423	COG0577	efflux transmembrane transporter activity
AGRA3207_001431	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AGRA3207_001433	COG0756	dUTP diphosphatase activity
AGRA3207_001441	COG0706	membrane insertase activity
AGRA3207_001442	COG0525	valine-tRNA ligase activity
AGRA3207_001448	COG2205	protein histidine kinase activity
AGRA3207_001449	COG0745	RESPONSE REGULATOR receiver
AGRA3207_001451	COG0483	inositol monophosphate 1-phosphatase activity
AGRA3207_001452	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AGRA3207_001460	COG3402	PFAM membrane-flanked domain
AGRA3207_001464	COG1252	NADH dehydrogenase
AGRA3207_001465	COG1881	PFAM PEBP family protein
AGRA3207_001467	COG0288	reversible hydration of carbon dioxide
AGRA3207_001477	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AGRA3207_001486	COG1819	glycosyl
AGRA3207_001487	COG0596	Alpha beta hydrolase
AGRA3207_001487	COG2945	thiolester hydrolase activity
AGRA3207_001491	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AGRA3207_001502	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_001508	COG0517	IMP dehydrogenase activity
AGRA3207_001511	COG3268	Saccharopine dehydrogenase
AGRA3207_001512	COG0277	FAD linked oxidase domain protein
AGRA3207_001513	COG0179	Fumarylacetoacetate (FAA) hydrolase
AGRA3207_001515	COG1414	Transcriptional regulator
AGRA3207_001517	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AGRA3207_001518	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_001519	COG1486	melibiose metabolic process
AGRA3207_001521	COG0395	ABC-type sugar transport system, permease component
AGRA3207_001528	COG0432	Pfam Uncharacterised protein family UPF0047
AGRA3207_001530	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AGRA3207_001548	COG2378	regulation of single-species biofilm formation
AGRA3207_001549	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AGRA3207_001549	COG1796	DNA polymerase
AGRA3207_001550	COG4585	Histidine kinase
AGRA3207_001551	COG2197	response regulator
AGRA3207_001557	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AGRA3207_001558	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGRA3207_001577	COG0514	ATP-dependent DNA helicase (RecQ)
AGRA3207_001586	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AGRA3207_001588	COG2011	ABC-type metal ion transport system permease component
AGRA3207_001589	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AGRA3207_001591	COG2197	response regulator
AGRA3207_001592	COG4585	Histidine kinase
AGRA3207_001597	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AGRA3207_001601	COG2197	response regulator
AGRA3207_001603	COG0187	DNA topoisomerase II activity
AGRA3207_001604	COG1131	(ABC) transporter
AGRA3207_001606	COG3022	response to hydroperoxide
AGRA3207_001607	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AGRA3207_001608	COG4191	Histidine kinase
AGRA3207_001610	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AGRA3207_001617	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AGRA3207_001618	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AGRA3207_001619	COG1984	allophanate hydrolase subunit 2
AGRA3207_001620	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_001621	COG1309	transcriptional regulator
AGRA3207_001624	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AGRA3207_001626	COG0778	Nitroreductase
AGRA3207_001629	COG0673	inositol 2-dehydrogenase activity
AGRA3207_001633	COG1802	Transcriptional regulator
AGRA3207_001636	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGRA3207_001638	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AGRA3207_001639	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AGRA3207_001640	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AGRA3207_001642	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AGRA3207_001643	COG0495	leucyl-tRNA aminoacylation
AGRA3207_001646	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_001648	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_001653	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AGRA3207_001654	COG0277	FAD linked oxidase domain protein
AGRA3207_001656	COG0726	polysaccharide deacetylase
AGRA3207_001659	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AGRA3207_001662	COG0577	efflux transmembrane transporter activity
AGRA3207_001663	COG1136	(ABC) transporter
AGRA3207_001669	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGRA3207_001672	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_001696	COG0406	alpha-ribazole phosphatase activity
AGRA3207_001698	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AGRA3207_001699	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AGRA3207_001700	COG0501	Belongs to the peptidase M48B family
AGRA3207_001702	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AGRA3207_001703	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AGRA3207_001704	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AGRA3207_001705	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AGRA3207_001706	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AGRA3207_001707	COG1530	ribonuclease E activity
AGRA3207_001710	COG0772	Belongs to the SEDS family
AGRA3207_001711	COG0768	penicillin binding
AGRA3207_001714	COG1077	Cell shape determining protein MreB Mrl
AGRA3207_001715	COG0105	UTP biosynthetic process
AGRA3207_001718	COG0285	dihydrofolate synthase activity
AGRA3207_001721	COG0525	valine-tRNA ligase activity
AGRA3207_001724	COG2197	response regulator
AGRA3207_001725	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AGRA3207_001726	COG0740	serine-type endopeptidase activity
AGRA3207_001727	COG0740	serine-type endopeptidase activity
AGRA3207_001728	COG0544	peptidyl-prolyl cis-trans isomerase activity
AGRA3207_001730	COG2183	response to ionizing radiation
AGRA3207_001737	COG1733	regulation of RNA biosynthetic process
AGRA3207_001739	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AGRA3207_001754	COG2326	polyphosphate kinase activity
AGRA3207_001760	COG4585	Histidine kinase
AGRA3207_001761	COG2197	response regulator
AGRA3207_001764	COG0583	DNA-binding transcription factor activity
AGRA3207_001765	COG1454	alcohol dehydrogenase
AGRA3207_001766	COG3485	protocatechuate 3,4-dioxygenase
AGRA3207_001768	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGRA3207_001769	COG0402	S-adenosylhomocysteine deaminase activity
AGRA3207_001770	COG0657	acetylesterase activity
AGRA3207_001772	COG2271	Major facilitator Superfamily
AGRA3207_001776	COG2814	Major facilitator Superfamily
AGRA3207_001782	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AGRA3207_001784	COG0243	molybdopterin cofactor binding
AGRA3207_001784	COG3383	formate dehydrogenase (NAD+) activity
AGRA3207_001785	COG0243	molybdopterin cofactor binding
AGRA3207_001785	COG3383	formate dehydrogenase (NAD+) activity
AGRA3207_001786	COG0709	Synthesizes selenophosphate from selenide and ATP
AGRA3207_001789	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGRA3207_001794	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_001803	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_001805	COG0174	glutamine synthetase
AGRA3207_001809	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AGRA3207_001814	COG2078	PFAM AMMECR1 domain protein
AGRA3207_001814	COG3885	ferrous iron binding
AGRA3207_001818	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AGRA3207_001818	COG0519	Catalyzes the synthesis of GMP from XMP
AGRA3207_001821	COG2205	protein histidine kinase activity
AGRA3207_001825	COG0698	ribose 5-phosphate isomerase
AGRA3207_001828	COG1122	ATPase activity
AGRA3207_001831	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AGRA3207_001835	COG0154	amidase activity
AGRA3207_001837	COG0129	dihydroxy-acid dehydratase activity
AGRA3207_001840	COG1505	serine-type exopeptidase activity
AGRA3207_001841	COG2226	methyltransferase
AGRA3207_001845	COG0668	transmembrane transport
AGRA3207_001847	COG0366	Alpha amylase catalytic
AGRA3207_001851	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AGRA3207_001856	COG3800	Transcriptional regulator
AGRA3207_001856	COG1396	sequence-specific DNA binding
AGRA3207_001857	COG3706	GGDEF domain
AGRA3207_001858	COG0629	single-stranded DNA binding
AGRA3207_001861	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AGRA3207_001861	COG1648	precorrin-2 dehydrogenase activity
AGRA3207_001866	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
AGRA3207_001867	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AGRA3207_001868	COG1797	cobyrinic acid a,c-diamide synthase activity
AGRA3207_001874	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_001881	COG1136	(ABC) transporter
AGRA3207_001882	COG4585	Histidine kinase
AGRA3207_001883	COG2197	response regulator
AGRA3207_001886	COG0587	DNA-directed DNA polymerase activity
AGRA3207_001889	COG1309	transcriptional regulator
AGRA3207_001897	COG1174	glycine betaine transport
AGRA3207_001899	COG1492	cobalamin metabolic process
AGRA3207_001903	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AGRA3207_001904	COG1335	isochorismatase
AGRA3207_001907	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AGRA3207_001910	COG3842	ATPase activity
AGRA3207_001911	COG1177	transmembrane transport
AGRA3207_001912	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGRA3207_001914	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_001918	COG1802	Transcriptional regulator
AGRA3207_001921	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGRA3207_001923	COG0511	ligase activity, forming carbon-carbon bonds
AGRA3207_001923	COG5016	pyruvate
AGRA3207_001924	COG0439	Biotin carboxylase
AGRA3207_001929	COG1414	Transcriptional regulator
AGRA3207_001930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGRA3207_001933	COG3621	Patatin-like phospholipase
AGRA3207_001938	COG3629	intracellular signal transduction
AGRA3207_001938	COG3903	Transcriptional regulator
AGRA3207_001951	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AGRA3207_001952	COG1414	Transcriptional regulator
AGRA3207_001954	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGRA3207_001954	COG0596	Alpha beta hydrolase
AGRA3207_001957	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_001958	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_001960	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGRA3207_001960	COG0723	plastoquinol--plastocyanin reductase activity
AGRA3207_001962	COG1396	sequence-specific DNA binding
AGRA3207_001971	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AGRA3207_001975	COG4638	Rieske (2fe-2S)
AGRA3207_001987	COG0022	dehydrogenase e1 component
AGRA3207_001989	COG0477	Major facilitator Superfamily
AGRA3207_002001	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGRA3207_002002	COG1129	ABC transporter
AGRA3207_002004	COG1414	Transcriptional regulator
AGRA3207_002007	COG2311	Membrane
AGRA3207_002008	COG2197	response regulator
AGRA3207_002009	COG4585	Histidine kinase
AGRA3207_002011	COG1801	Protein of unknown function DUF72
AGRA3207_002024	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AGRA3207_002025	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_002026	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_002027	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGRA3207_002027	COG1116	anion transmembrane transporter activity
AGRA3207_002028	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGRA3207_002032	COG2186	Transcriptional regulator
AGRA3207_002047	COG0515	serine threonine protein kinase
AGRA3207_002053	COG4172	Belongs to the ABC transporter superfamily
AGRA3207_002054	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGRA3207_002055	COG0601	transmembrane transport
AGRA3207_002058	COG1609	Transcriptional regulator
AGRA3207_002066	COG2197	response regulator
AGRA3207_002069	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AGRA3207_002070	COG2175	clavaminate synthase activity
AGRA3207_002071	COG2124	cytochrome p450
AGRA3207_002072	COG0583	DNA-binding transcription factor activity
AGRA3207_002081	COG1446	asparaginase
AGRA3207_002085	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AGRA3207_002086	COG3618	amidohydrolase
AGRA3207_002087	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AGRA3207_002088	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AGRA3207_002093	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AGRA3207_002116	COG3191	aminopeptidase activity
AGRA3207_002117	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AGRA3207_002118	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AGRA3207_002124	COG2197	response regulator
AGRA3207_002134	COG2226	methyltransferase
AGRA3207_002136	COG3469	chitinase activity
AGRA3207_002138	COG1051	belongs to the nudix hydrolase family
AGRA3207_002139	COG4585	Histidine kinase
AGRA3207_002140	COG2197	response regulator
AGRA3207_002156	COG2226	methyltransferase
AGRA3207_002158	COG0708	Exodeoxyribonuclease III
AGRA3207_002160	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AGRA3207_002171	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGRA3207_002173	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AGRA3207_002181	COG2801	Transposase and inactivated derivatives
AGRA3207_002197	COG0765	amino acid transport
AGRA3207_002199	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AGRA3207_002203	COG2186	Transcriptional regulator
AGRA3207_002224	COG4608	Belongs to the ABC transporter superfamily
AGRA3207_002233	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_002234	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGRA3207_002235	COG0300	oxidoreductase activity
AGRA3207_002237	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AGRA3207_002239	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AGRA3207_002240	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGRA3207_002241	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGRA3207_002243	COG0477	Major facilitator Superfamily
AGRA3207_002261	COG0464	growth
AGRA3207_002268	COG3629	intracellular signal transduction
AGRA3207_002268	COG3903	Transcriptional regulator
AGRA3207_002275	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGRA3207_002278	COG0657	acetylesterase activity
AGRA3207_002280	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_002281	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AGRA3207_002285	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AGRA3207_002289	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AGRA3207_002290	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGRA3207_002292	COG0154	amidase activity
AGRA3207_002293	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AGRA3207_002300	COG1136	(ABC) transporter
AGRA3207_002300	COG0577	efflux transmembrane transporter activity
AGRA3207_002301	COG1136	(ABC) transporter
AGRA3207_002303	COG0745	RESPONSE REGULATOR receiver
AGRA3207_002304	COG2205	protein histidine kinase activity
AGRA3207_002305	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_002308	COG3655	Transcriptional regulator
AGRA3207_002313	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AGRA3207_002317	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AGRA3207_002319	COG1132	(ABC) transporter
AGRA3207_002320	COG0326	Molecular chaperone. Has ATPase activity
AGRA3207_002321	COG1278	Cold shock
AGRA3207_002327	COG1024	Enoyl-CoA hydratase
AGRA3207_002328	COG1024	Enoyl-CoA hydratase
AGRA3207_002342	COG1672	PFAM Archaeal ATPase
AGRA3207_002342	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_002344	COG3629	intracellular signal transduction
AGRA3207_002344	COG3903	Transcriptional regulator
AGRA3207_002348	COG0443	Heat shock 70 kDa protein
AGRA3207_002349	COG0443	Heat shock 70 kDa protein
AGRA3207_002351	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AGRA3207_002352	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AGRA3207_002353	COG3842	ATPase activity
AGRA3207_002354	COG1177	transmembrane transport
AGRA3207_002355	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGRA3207_002358	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_002360	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AGRA3207_002361	COG1024	Enoyl-CoA hydratase
AGRA3207_002362	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AGRA3207_002363	COG1024	Enoyl-CoA hydratase
AGRA3207_002364	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_002367	COG2032	superoxide dismutase activity
AGRA3207_002370	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AGRA3207_002374	COG0439	Biotin carboxylase
AGRA3207_002375	COG0511	ligase activity, forming carbon-carbon bonds
AGRA3207_002376	COG0825	malonyl-CoA metabolic process
AGRA3207_002376	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AGRA3207_002385	COG0745	RESPONSE REGULATOR receiver
AGRA3207_002386	COG2409	Drug exporters of the RND superfamily
AGRA3207_002387	COG2205	protein histidine kinase activity
AGRA3207_002388	COG4585	Histidine kinase
AGRA3207_002389	COG2197	response regulator
AGRA3207_002393	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AGRA3207_002409	COG0673	inositol 2-dehydrogenase activity
AGRA3207_002415	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_002426	COG1051	belongs to the nudix hydrolase family
AGRA3207_002436	COG0477	Major facilitator Superfamily
AGRA3207_002445	COG3279	Response regulator of the LytR AlgR family
AGRA3207_002452	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AGRA3207_002452	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AGRA3207_002453	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_002459	COG0515	serine threonine protein kinase
AGRA3207_002464	COG1136	(ABC) transporter
AGRA3207_002464	COG0577	efflux transmembrane transporter activity
AGRA3207_002465	COG0577	efflux transmembrane transporter activity
AGRA3207_002465	COG1136	(ABC) transporter
AGRA3207_002467	COG0745	RESPONSE REGULATOR receiver
AGRA3207_002468	COG2205	protein histidine kinase activity
AGRA3207_002476	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AGRA3207_002477	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AGRA3207_002478	COG2080	2 iron, 2 sulfur cluster binding
AGRA3207_002487	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AGRA3207_002488	COG1472	Belongs to the glycosyl hydrolase 3 family
AGRA3207_002492	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGRA3207_002493	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGRA3207_002495	COG0477	Major facilitator Superfamily
AGRA3207_002501	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AGRA3207_002510	COG1834	amidinotransferase
AGRA3207_002517	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AGRA3207_002519	COG0204	Acyl-transferase
AGRA3207_002521	COG0626	cystathionine gamma-synthase activity
AGRA3207_002523	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AGRA3207_002528	COG1846	Transcriptional regulator
AGRA3207_002536	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AGRA3207_002537	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AGRA3207_002540	COG1309	transcriptional regulator
AGRA3207_002542	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGRA3207_002543	COG1309	transcriptional regulator
AGRA3207_002548	COG1793	dna ligase
AGRA3207_002550	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AGRA3207_002551	COG0750	zinc metalloprotease
AGRA3207_002552	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AGRA3207_002553	COG0509	glycine decarboxylation via glycine cleavage system
AGRA3207_002554	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AGRA3207_002555	COG1760	l-serine dehydratase
AGRA3207_002557	COG0183	Belongs to the thiolase family
AGRA3207_002559	COG1396	sequence-specific DNA binding
AGRA3207_002562	COG1396	sequence-specific DNA binding
AGRA3207_002574	COG1302	Protein conserved in bacteria
AGRA3207_002576	COG4565	transcriptional regulatory protein
AGRA3207_002577	COG3290	protein histidine kinase activity
AGRA3207_002578	COG1301	dicarboxylic acid transport
AGRA3207_002583	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AGRA3207_002598	COG1595	DNA-templated transcription, initiation
AGRA3207_002600	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AGRA3207_002601	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AGRA3207_002602	COG1234	tRNA 3'-trailer cleavage
AGRA3207_002603	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AGRA3207_002613	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AGRA3207_002615	COG1335	isochorismatase
AGRA3207_002616	COG3265	gluconokinase activity
AGRA3207_002620	COG1678	Uncharacterized ACR, COG1678
AGRA3207_002627	COG2814	Major facilitator Superfamily
AGRA3207_002629	COG0183	Belongs to the thiolase family
AGRA3207_002632	COG0628	permease
AGRA3207_002636	COG1250	3-hydroxyacyl-CoA dehydrogenase
AGRA3207_002639	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
AGRA3207_002641	COG1994	Peptidase M50
AGRA3207_002643	COG0702	epimerase
AGRA3207_002644	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_002650	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AGRA3207_002651	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AGRA3207_002652	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AGRA3207_002653	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AGRA3207_002654	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AGRA3207_002655	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AGRA3207_002656	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AGRA3207_002660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AGRA3207_002662	COG4585	Histidine kinase
AGRA3207_002669	COG2197	response regulator
AGRA3207_002671	COG1131	(ABC) transporter
AGRA3207_002674	COG2890	protein-(glutamine-N5) methyltransferase activity
AGRA3207_002675	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AGRA3207_002676	COG0254	rRNA binding
AGRA3207_002677	COG2197	response regulator
AGRA3207_002680	COG0083	homoserine kinase activity
AGRA3207_002681	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AGRA3207_002682	COG0460	homoserine dehydrogenase
AGRA3207_002683	COG0019	diaminopimelate decarboxylase activity
AGRA3207_002689	COG2319	Wd-40 repeat
AGRA3207_002689	COG4249	Peptidase C14 caspase catalytic subunit p20
AGRA3207_002691	COG2197	response regulator
AGRA3207_002700	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AGRA3207_002701	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_002705	COG2345	Transcriptional regulator
AGRA3207_002709	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AGRA3207_002710	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AGRA3207_002711	COG2226	methyltransferase
AGRA3207_002712	COG2409	Drug exporters of the RND superfamily
AGRA3207_002713	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_002714	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_002715	COG2226	methyltransferase
AGRA3207_002715	COG1073	alpha beta
AGRA3207_002718	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_002729	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGRA3207_002736	COG1846	Transcriptional regulator
AGRA3207_002738	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGRA3207_002741	COG2226	methyltransferase
AGRA3207_002754	COG3467	pyridoxamine 5'-phosphate
AGRA3207_002756	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGRA3207_002757	COG1129	ABC transporter
AGRA3207_002758	COG1879	ABC-type sugar transport system periplasmic component
AGRA3207_002759	COG1869	D-ribose catabolic process
AGRA3207_002760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGRA3207_002761	COG1609	Transcriptional regulator
AGRA3207_002763	COG0596	Alpha beta hydrolase
AGRA3207_002773	COG0395	ABC-type sugar transport system, permease component
AGRA3207_002776	COG2130	NADP-dependent
AGRA3207_002780	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_002790	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AGRA3207_002791	COG3119	arylsulfatase activity
AGRA3207_002791	COG3408	Glycogen debranching enzyme
AGRA3207_002792	COG1132	(ABC) transporter
AGRA3207_002794	COG0517	IMP dehydrogenase activity
AGRA3207_002795	COG1316	TRANSCRIPTIONal
AGRA3207_002797	COG1686	Belongs to the peptidase S11 family
AGRA3207_002798	COG1309	transcriptional regulator
AGRA3207_002800	COG2197	response regulator
AGRA3207_002802	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AGRA3207_002806	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AGRA3207_002813	COG2124	cytochrome p450
AGRA3207_002817	COG2197	response regulator
AGRA3207_002819	COG0515	serine threonine protein kinase
AGRA3207_002832	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_002836	COG1846	Transcriptional regulator
AGRA3207_002842	COG1024	Enoyl-CoA hydratase
AGRA3207_002844	COG2070	2-Nitropropane dioxygenase
AGRA3207_002846	COG0500	methyltransferase
AGRA3207_002847	COG4981	capsule polysaccharide biosynthetic process
AGRA3207_002856	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGRA3207_002859	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGRA3207_002859	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AGRA3207_002867	COG0443	Heat shock 70 kDa protein
AGRA3207_002868	COG0596	Alpha beta hydrolase
AGRA3207_002873	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AGRA3207_002875	COG0745	RESPONSE REGULATOR receiver
AGRA3207_002876	COG2205	protein histidine kinase activity
AGRA3207_002887	COG0768	penicillin binding
AGRA3207_002888	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AGRA3207_002890	COG2884	Cell division ATP-binding protein ftsE
AGRA3207_002893	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AGRA3207_002895	COG2902	Dehydrogenase
AGRA3207_002897	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGRA3207_002899	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_002901	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AGRA3207_002902	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AGRA3207_002903	COG1737	Transcriptional regulator
AGRA3207_002905	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AGRA3207_002906	COG1472	Belongs to the glycosyl hydrolase 3 family
AGRA3207_002908	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AGRA3207_002909	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AGRA3207_002912	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AGRA3207_002913	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AGRA3207_002915	COG1263	PTS System
AGRA3207_002916	COG2188	Transcriptional regulator
AGRA3207_002917	COG1263	PTS System
AGRA3207_002919	COG0653	protein targeting
AGRA3207_002921	COG3214	Protein conserved in bacteria
AGRA3207_002922	COG1595	DNA-templated transcription, initiation
AGRA3207_002926	COG2197	response regulator
AGRA3207_002927	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AGRA3207_002929	COG5401	PFAM Sporulation and spore germination
AGRA3207_002930	COG5002	protein histidine kinase activity
AGRA3207_002930	COG5000	phosphorelay sensor kinase activity
AGRA3207_002931	COG0745	RESPONSE REGULATOR receiver
AGRA3207_002935	COG0714	Associated with various cellular activities
AGRA3207_002940	COG0402	S-adenosylhomocysteine deaminase activity
AGRA3207_002943	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AGRA3207_002944	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AGRA3207_002946	COG2197	response regulator
AGRA3207_002947	COG4585	Histidine kinase
AGRA3207_002949	COG2222	sugar isomerase
AGRA3207_002950	COG2835	tetraacyldisaccharide 4'-kinase activity
AGRA3207_002951	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AGRA3207_002958	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AGRA3207_002959	COG0778	Nitroreductase
AGRA3207_002959	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
AGRA3207_002960	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AGRA3207_002961	COG0583	DNA-binding transcription factor activity
AGRA3207_002965	COG2226	methyltransferase
AGRA3207_002965	COG1073	alpha beta
AGRA3207_002967	COG3118	belongs to the thioredoxin family
AGRA3207_002968	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_002972	COG1316	TRANSCRIPTIONal
AGRA3207_002973	COG3594	Acyltransferase
AGRA3207_002974	COG3594	Acyltransferase
AGRA3207_002975	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AGRA3207_002975	COG0463	Glycosyl transferase, family 2
AGRA3207_002976	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AGRA3207_002977	COG1215	transferase activity, transferring glycosyl groups
AGRA3207_002983	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_002987	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AGRA3207_002989	COG3973	AAA domain
AGRA3207_002990	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGRA3207_002992	COG1215	transferase activity, transferring glycosyl groups
AGRA3207_002998	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AGRA3207_003002	COG1316	TRANSCRIPTIONal
AGRA3207_003006	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_003007	COG1832	CoA-binding protein
AGRA3207_003011	COG2205	protein histidine kinase activity
AGRA3207_003012	COG0745	RESPONSE REGULATOR receiver
AGRA3207_003017	COG2193	ferroxidase activity
AGRA3207_003018	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_003019	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AGRA3207_003019	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AGRA3207_003020	COG1024	Enoyl-CoA hydratase
AGRA3207_003021	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AGRA3207_003022	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AGRA3207_003024	COG1432	Conserved Protein
AGRA3207_003038	COG1674	ftsk spoiiie
AGRA3207_003048	COG4770	biotin carboxylase activity
AGRA3207_003053	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AGRA3207_003055	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AGRA3207_003071	COG2936	dipeptidyl-peptidase activity
AGRA3207_003074	COG1079	Belongs to the binding-protein-dependent transport system permease family
AGRA3207_003076	COG3845	ABC transporter
AGRA3207_003077	COG1744	ABC transporter substrate-binding protein PnrA-like
AGRA3207_003078	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AGRA3207_003078	COG1473	amidohydrolase
AGRA3207_003079	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AGRA3207_003080	COG1686	Belongs to the peptidase S11 family
AGRA3207_003083	COG0180	Tryptophanyl-tRNA synthetase
AGRA3207_003084	COG1253	flavin adenine dinucleotide binding
AGRA3207_003086	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AGRA3207_003088	COG0326	Molecular chaperone. Has ATPase activity
AGRA3207_003089	COG0039	L-malate dehydrogenase activity
AGRA3207_003093	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AGRA3207_003096	COG0138	bifunctional purine biosynthesis protein purh
AGRA3207_003101	COG0045	succinate-CoA ligase (ADP-forming) activity
AGRA3207_003111	COG1461	Dihydroxyacetone kinase
AGRA3207_003112	COG2376	Dihydroxyacetone kinase
AGRA3207_003113	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AGRA3207_003118	COG2197	response regulator
AGRA3207_003122	COG1301	dicarboxylic acid transport
AGRA3207_003147	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AGRA3207_003148	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AGRA3207_003149	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AGRA3207_003154	COG0745	RESPONSE REGULATOR receiver
AGRA3207_003155	COG5002	protein histidine kinase activity
AGRA3207_003161	COG3220	belongs to the UPF0276 family
AGRA3207_003163	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_003164	COG1116	anion transmembrane transporter activity
AGRA3207_003175	COG0454	-acetyltransferase
AGRA3207_003176	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_003177	COG0431	NADPH-dependent FMN reductase
AGRA3207_003179	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_003180	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_003184	COG0640	Transcriptional regulator
AGRA3207_003189	COG0515	serine threonine protein kinase
AGRA3207_003197	COG1132	(ABC) transporter
AGRA3207_003198	COG1132	(ABC) transporter
AGRA3207_003206	COG2205	protein histidine kinase activity
AGRA3207_003211	COG2770	Histidine kinase
AGRA3207_003211	COG2208	phosphoserine phosphatase activity
AGRA3207_003214	COG0702	epimerase
AGRA3207_003217	COG0416	fatty acid biosynthetic process
AGRA3207_003219	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AGRA3207_003221	COG1233	COG1233 Phytoene dehydrogenase and related
AGRA3207_003224	COG0789	Transcriptional regulator
AGRA3207_003227	COG1129	ABC transporter
AGRA3207_003231	COG0477	Major facilitator Superfamily
AGRA3207_003235	COG2368	4-hydroxyphenylacetate
AGRA3207_003239	COG1733	regulation of RNA biosynthetic process
AGRA3207_003242	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_003249	COG2319	Wd-40 repeat
AGRA3207_003249	COG4249	Peptidase C14 caspase catalytic subunit p20
AGRA3207_003252	COG0402	S-adenosylhomocysteine deaminase activity
AGRA3207_003263	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AGRA3207_003266	COG1278	Cold shock
AGRA3207_003267	COG0513	Belongs to the DEAD box helicase family
AGRA3207_003268	COG2375	cellular response to nickel ion
AGRA3207_003273	COG0515	serine threonine protein kinase
AGRA3207_003283	COG4555	ABC transporter
AGRA3207_003285	COG0667	Aldo Keto reductase
AGRA3207_003291	COG4585	Histidine kinase
AGRA3207_003292	COG2197	response regulator
AGRA3207_003294	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AGRA3207_003295	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AGRA3207_003296	COG0829	nickel cation binding
AGRA3207_003297	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AGRA3207_003298	COG0830	nickel cation binding
AGRA3207_003299	COG0804	urea catabolic process
AGRA3207_003302	COG0831	urea catabolic process
AGRA3207_003303	COG4413	Urea transporter
AGRA3207_003305	COG0531	amino acid
AGRA3207_003308	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGRA3207_003315	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AGRA3207_003317	COG1120	ATPase activity
AGRA3207_003318	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGRA3207_003319	COG4558	Periplasmic binding protein
AGRA3207_003326	COG5398	heme oxygenase
AGRA3207_003327	COG2815	serine threonine protein kinase
AGRA3207_003327	COG0515	serine threonine protein kinase
AGRA3207_003333	COG2267	carboxylic ester hydrolase activity
AGRA3207_003335	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AGRA3207_003339	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
AGRA3207_003342	COG0604	alcohol dehydrogenase
AGRA3207_003342	COG3321	synthase
AGRA3207_003355	COG1472	Belongs to the glycosyl hydrolase 3 family
AGRA3207_003362	COG2197	response regulator
AGRA3207_003363	COG0483	inositol monophosphate 1-phosphatase activity
AGRA3207_003366	COG1260	myo-inositol-1-phosphate synthase
AGRA3207_003368	COG2986	histidine ammonia-lyase
AGRA3207_003369	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_003370	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AGRA3207_003373	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_003374	COG2814	Major facilitator Superfamily
AGRA3207_003377	COG1414	Transcriptional regulator
AGRA3207_003394	COG0189	ligase activity
AGRA3207_003395	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AGRA3207_003396	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AGRA3207_003398	COG3959	Transketolase, thiamine diphosphate binding domain
AGRA3207_003399	COG3958	Transketolase
AGRA3207_003401	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_003402	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_003405	COG0028	Belongs to the TPP enzyme family
AGRA3207_003409	COG0542	response to heat
AGRA3207_003414	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AGRA3207_003420	COG4585	Histidine kinase
AGRA3207_003421	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_003449	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_003450	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AGRA3207_003455	COG3629	intracellular signal transduction
AGRA3207_003455	COG3903	Transcriptional regulator
AGRA3207_003466	COG2197	response regulator
AGRA3207_003469	COG2192	nodulation
AGRA3207_003471	COG0505	Belongs to the CarA family
AGRA3207_003472	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AGRA3207_003475	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AGRA3207_003482	COG1131	(ABC) transporter
AGRA3207_003484	COG1131	(ABC) transporter
AGRA3207_003489	COG1595	DNA-templated transcription, initiation
AGRA3207_003497	COG1129	ABC transporter
AGRA3207_003501	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_003512	COG0464	growth
AGRA3207_003513	COG0583	DNA-binding transcription factor activity
AGRA3207_003515	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_003517	COG0277	FAD linked oxidase domain protein
AGRA3207_003517	COG0247	lactate metabolic process
AGRA3207_003520	COG0583	DNA-binding transcription factor activity
AGRA3207_003521	COG0584	glycerophosphoryl diester phosphodiesterase
AGRA3207_003523	COG1113	amino acid transport
AGRA3207_003536	COG1674	ftsk spoiiie
AGRA3207_003544	COG0019	diaminopimelate decarboxylase activity
AGRA3207_003554	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AGRA3207_003558	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
AGRA3207_003561	COG3246	L-lysine catabolic process to acetate
AGRA3207_003563	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AGRA3207_003564	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AGRA3207_003567	COG1116	anion transmembrane transporter activity
AGRA3207_003568	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_003569	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_003572	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGRA3207_003574	COG3290	protein histidine kinase activity
AGRA3207_003580	COG0443	Heat shock 70 kDa protein
AGRA3207_003581	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AGRA3207_003584	COG0542	response to heat
AGRA3207_003587	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
AGRA3207_003600	COG4977	sequence-specific DNA binding
AGRA3207_003605	COG0667	Aldo Keto reductase
AGRA3207_003610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGRA3207_003611	COG0601	transmembrane transport
AGRA3207_003616	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_003619	COG2508	Transcriptional regulator
AGRA3207_003623	COG1414	Transcriptional regulator
AGRA3207_003626	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AGRA3207_003628	COG0559	Belongs to the binding-protein-dependent transport system permease family
AGRA3207_003633	COG0346	lactoylglutathione lyase activity
AGRA3207_003634	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AGRA3207_003637	COG1902	pentaerythritol trinitrate reductase activity
AGRA3207_003639	COG4638	Rieske (2fe-2S)
AGRA3207_003640	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AGRA3207_003641	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AGRA3207_003645	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGRA3207_003648	COG0300	oxidoreductase activity
AGRA3207_003649	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AGRA3207_003649	COG0519	Catalyzes the synthesis of GMP from XMP
AGRA3207_003651	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_003652	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_003654	COG1021	2,3-dihydroxybenzoate-AMP ligase
AGRA3207_003658	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AGRA3207_003663	COG0154	amidase activity
AGRA3207_003665	COG5285	phytanoyl-CoA dioxygenase
AGRA3207_003667	COG0477	Major facilitator Superfamily
AGRA3207_003684	COG1672	PFAM Archaeal ATPase
AGRA3207_003684	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_003687	COG2197	response regulator
AGRA3207_003699	COG4941	Belongs to the sigma-70 factor family
AGRA3207_003704	COG2226	methyltransferase
AGRA3207_003716	COG0492	ferredoxin-NADP+ reductase activity
AGRA3207_003720	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_003724	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AGRA3207_003739	COG1396	sequence-specific DNA binding
AGRA3207_003740	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
AGRA3207_003748	COG0300	oxidoreductase activity
AGRA3207_003749	COG0789	Transcriptional regulator
AGRA3207_003756	COG0028	Belongs to the TPP enzyme family
AGRA3207_003767	COG0167	dihydroorotate dehydrogenase activity
AGRA3207_003768	COG2890	protein-(glutamine-N5) methyltransferase activity
AGRA3207_003770	COG0860	N-Acetylmuramoyl-L-alanine amidase
AGRA3207_003778	COG2949	membrane
AGRA3207_003779	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AGRA3207_003782	COG0406	alpha-ribazole phosphatase activity
AGRA3207_003787	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AGRA3207_003788	COG0047	phosphoribosylformylglycinamidine synthase activity
AGRA3207_003790	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AGRA3207_003796	COG0022	dehydrogenase e1 component
AGRA3207_003797	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGRA3207_003798	COG2885	chlorophyll binding
AGRA3207_003799	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_003804	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AGRA3207_003808	COG4221	oxidoreductase activity
AGRA3207_003820	COG0494	nUDIX hydrolase
AGRA3207_003820	COG0406	alpha-ribazole phosphatase activity
AGRA3207_003821	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AGRA3207_003824	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AGRA3207_003826	COG4251	negative regulation of phosphorylation
AGRA3207_003827	COG0784	Response regulator, receiver
AGRA3207_003831	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_003844	COG2226	methyltransferase
AGRA3207_003846	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AGRA3207_003864	COG0717	Belongs to the dCTP deaminase family
AGRA3207_003866	COG0247	lactate metabolic process
AGRA3207_003866	COG2181	nitrate reductase activity
AGRA3207_003868	COG0183	Belongs to the thiolase family
AGRA3207_003869	COG1250	3-hydroxyacyl-CoA dehydrogenase
AGRA3207_003872	COG0443	Heat shock 70 kDa protein
AGRA3207_003873	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AGRA3207_003874	COG0484	heat shock protein binding
AGRA3207_003875	COG0789	Transcriptional regulator
AGRA3207_003876	COG0542	response to heat
AGRA3207_003880	COG3973	AAA domain
AGRA3207_003885	COG1432	Conserved Protein
AGRA3207_003888	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AGRA3207_003890	COG0586	Pfam SNARE associated Golgi protein
AGRA3207_003900	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AGRA3207_003904	COG0598	Magnesium transport protein CorA
AGRA3207_003905	COG0151	Belongs to the GarS family
AGRA3207_003906	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AGRA3207_003908	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AGRA3207_003910	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AGRA3207_003912	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AGRA3207_003915	COG2268	Band 7 protein
AGRA3207_003918	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_003918	COG0204	Acyl-transferase
AGRA3207_003920	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_003924	COG0515	serine threonine protein kinase
AGRA3207_003926	COG1253	flavin adenine dinucleotide binding
AGRA3207_003927	COG1253	flavin adenine dinucleotide binding
AGRA3207_003929	COG1950	PFAM Membrane protein of
AGRA3207_003931	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AGRA3207_003932	COG0514	ATP-dependent DNA helicase (RecQ)
AGRA3207_003934	COG0745	RESPONSE REGULATOR receiver
AGRA3207_003935	COG2205	protein histidine kinase activity
AGRA3207_003937	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AGRA3207_003938	COG0745	RESPONSE REGULATOR receiver
AGRA3207_003939	COG0642	Histidine kinase
AGRA3207_003942	COG2318	DinB family
AGRA3207_003961	COG3237	CsbD-like
AGRA3207_003968	COG1131	(ABC) transporter
AGRA3207_003970	COG2197	response regulator
AGRA3207_003978	COG0705	Rhomboid family
AGRA3207_003981	COG3764	Sortase (surface protein transpeptidase)
AGRA3207_003984	COG0515	serine threonine protein kinase
AGRA3207_003985	COG0515	serine threonine protein kinase
AGRA3207_003986	COG0768	penicillin binding
AGRA3207_003989	COG1716	ATPase activity
AGRA3207_003993	COG1695	Transcriptional regulator
AGRA3207_004000	COG0477	Major facilitator Superfamily
AGRA3207_004009	COG1902	pentaerythritol trinitrate reductase activity
AGRA3207_004016	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AGRA3207_004018	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AGRA3207_004024	COG2235	arginine
AGRA3207_004026	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AGRA3207_004030	COG0745	RESPONSE REGULATOR receiver
AGRA3207_004033	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_004039	COG2264	protein methyltransferase activity
AGRA3207_004040	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AGRA3207_004041	COG0561	phosphatase activity
AGRA3207_004043	COG3321	synthase
AGRA3207_004043	COG0604	alcohol dehydrogenase
AGRA3207_004043	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_004050	COG0326	Molecular chaperone. Has ATPase activity
AGRA3207_004058	COG1595	DNA-templated transcription, initiation
AGRA3207_004062	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_004066	COG0513	Belongs to the DEAD box helicase family
AGRA3207_004071	COG0483	inositol monophosphate 1-phosphatase activity
AGRA3207_004075	COG1609	Transcriptional regulator
AGRA3207_004079	COG1674	ftsk spoiiie
AGRA3207_004093	COG1309	transcriptional regulator
AGRA3207_004095	COG2249	NAD(P)H dehydrogenase (quinone) activity
AGRA3207_004098	COG3266	domain, Protein
AGRA3207_004100	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AGRA3207_004102	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
AGRA3207_004103	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AGRA3207_004104	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AGRA3207_004105	COG0592	DNA-directed DNA polymerase activity
AGRA3207_004106	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AGRA3207_004107	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AGRA3207_004109	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AGRA3207_004110	COG0706	membrane insertase activity
AGRA3207_004115	COG1522	sequence-specific DNA binding
AGRA3207_004120	COG0357	Ribosomal RNA small subunit methyltransferase G
AGRA3207_004121	COG1192	Involved in chromosome partitioning
AGRA3207_004123	COG1181	Belongs to the D-alanine--D-alanine ligase family
AGRA3207_004124	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGRA3207_004126	COG0492	ferredoxin-NADP+ reductase activity
AGRA3207_004129	COG1595	DNA-templated transcription, initiation
AGRA3207_004130	COG2815	serine threonine protein kinase
AGRA3207_004130	COG0515	serine threonine protein kinase
AGRA3207_004135	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AGRA3207_004141	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AGRA3207_004143	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AGRA3207_004151	COG0360	Binds together with S18 to 16S ribosomal RNA
AGRA3207_004152	COG0629	single-stranded DNA binding
AGRA3207_004153	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AGRA3207_004154	COG0359	binds to the 23S rRNA
AGRA3207_004158	COG0534	Mate efflux family protein
AGRA3207_004159	COG0305	Participates in initiation and elongation during chromosome replication
AGRA3207_004160	COG1846	Transcriptional regulator
AGRA3207_004161	COG0446	pyridine nucleotide-disulphide oxidoreductase
AGRA3207_004162	COG0596	Alpha beta hydrolase
AGRA3207_004164	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AGRA3207_004171	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AGRA3207_004172	COG0592	DNA-directed DNA polymerase activity
AGRA3207_004183	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AGRA3207_004188	COG2186	Transcriptional regulator
AGRA3207_004189	COG2807	transmembrane transport
AGRA3207_004195	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AGRA3207_004200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_004211	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AGRA3207_004212	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AGRA3207_004217	COG1733	regulation of RNA biosynthetic process
AGRA3207_004223	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_004236	COG4977	sequence-specific DNA binding
AGRA3207_004237	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AGRA3207_004238	COG0745	RESPONSE REGULATOR receiver
AGRA3207_004241	COG2172	sigma factor antagonist activity
AGRA3207_004242	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_004243	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_004253	COG2226	methyltransferase
AGRA3207_004254	COG1408	metallophosphoesterase
AGRA3207_004256	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AGRA3207_004258	COG0003	Pfam Anion-transporting ATPase
AGRA3207_004264	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGRA3207_004265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGRA3207_004268	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGRA3207_004270	COG0596	Alpha beta hydrolase
AGRA3207_004272	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AGRA3207_004273	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGRA3207_004285	COG1205	dead DEAH box helicase
AGRA3207_004285	COG1111	helicase
AGRA3207_004286	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_004287	COG2172	sigma factor antagonist activity
AGRA3207_004288	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
AGRA3207_004291	COG3830	Belongs to the UPF0237 family
AGRA3207_004291	COG0560	Phosphoserine phosphatase
AGRA3207_004293	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AGRA3207_004297	COG2197	response regulator
AGRA3207_004302	COG1119	ATPase activity
AGRA3207_004306	COG0243	molybdopterin cofactor binding
AGRA3207_004306	COG3383	formate dehydrogenase (NAD+) activity
AGRA3207_004318	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AGRA3207_004322	COG1309	transcriptional regulator
AGRA3207_004326	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AGRA3207_004328	COG3339	Conserved Protein
AGRA3207_004332	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_004333	COG2409	Drug exporters of the RND superfamily
AGRA3207_004334	COG1819	glycosyl
AGRA3207_004348	COG4941	Belongs to the sigma-70 factor family
AGRA3207_004351	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AGRA3207_004356	COG3570	aminoglycoside hydroxyurea antibiotic resistance kinase
AGRA3207_004363	COG2205	protein histidine kinase activity
AGRA3207_004364	COG0745	RESPONSE REGULATOR receiver
AGRA3207_004368	COG2353	YceI-like domain
AGRA3207_004369	COG1595	DNA-templated transcription, initiation
AGRA3207_004372	COG0515	serine threonine protein kinase
AGRA3207_004378	COG2197	response regulator
AGRA3207_004387	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
AGRA3207_004388	COG2610	gluconate transmembrane transporter activity
AGRA3207_004391	COG2197	response regulator
AGRA3207_004392	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_004393	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGRA3207_004402	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AGRA3207_004408	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_004415	COG1024	Enoyl-CoA hydratase
AGRA3207_004419	COG0747	negative chemotaxis
AGRA3207_004421	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGRA3207_004424	COG0531	amino acid
AGRA3207_004425	COG2197	response regulator
AGRA3207_004439	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_004442	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AGRA3207_004446	COG3118	belongs to the thioredoxin family
AGRA3207_004448	COG1982	Orn Lys Arg decarboxylase major
AGRA3207_004456	COG0464	growth
AGRA3207_004456	COG4451	ribulose bisphosphate carboxylase, small
AGRA3207_004468	COG0010	Belongs to the arginase family
AGRA3207_004470	COG0242	peptide deformylase activity
AGRA3207_004475	COG3189	MarR family transcriptional regulator
AGRA3207_004482	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AGRA3207_004484	COG1032	radical SAM domain protein
AGRA3207_004498	COG2197	response regulator
AGRA3207_004499	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_004499	COG1672	PFAM Archaeal ATPase
AGRA3207_004502	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGRA3207_004502	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGRA3207_004505	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AGRA3207_004507	COG3629	intracellular signal transduction
AGRA3207_004507	COG3903	Transcriptional regulator
AGRA3207_004508	COG3903	Transcriptional regulator
AGRA3207_004508	COG3629	intracellular signal transduction
AGRA3207_004515	COG2197	response regulator
AGRA3207_004516	COG0076	glutamate decarboxylase activity
AGRA3207_004519	COG1595	DNA-templated transcription, initiation
AGRA3207_004526	COG2267	carboxylic ester hydrolase activity
AGRA3207_004528	COG0477	Major facilitator Superfamily
AGRA3207_004529	COG3903	Transcriptional regulator
AGRA3207_004529	COG3629	intracellular signal transduction
AGRA3207_004529	COG3903	Transcriptional regulator
AGRA3207_004529	COG3629	intracellular signal transduction
AGRA3207_004530	COG2124	cytochrome p450
AGRA3207_004532	COG2814	Major facilitator Superfamily
AGRA3207_004534	COG4044	May play a role in the intracellular transport of hydrophobic ligands
AGRA3207_004540	COG0300	oxidoreductase activity
AGRA3207_004548	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGRA3207_004553	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AGRA3207_004554	COG4770	biotin carboxylase activity
AGRA3207_004563	COG2080	2 iron, 2 sulfur cluster binding
AGRA3207_004564	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AGRA3207_004565	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AGRA3207_004566	COG2226	methyltransferase
AGRA3207_004569	COG0583	DNA-binding transcription factor activity
AGRA3207_004578	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_004579	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AGRA3207_004582	COG2814	Major facilitator Superfamily
AGRA3207_004585	COG0179	Fumarylacetoacetate (FAA) hydrolase
AGRA3207_004588	COG1959	2 iron, 2 sulfur cluster binding
AGRA3207_004595	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGRA3207_004599	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AGRA3207_004599	COG1754	DNA topoisomerase type I activity
AGRA3207_004600	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AGRA3207_004602	COG1404	Belongs to the peptidase S8 family
AGRA3207_004603	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AGRA3207_004606	COG1774	PSP1 C-terminal conserved region
AGRA3207_004612	COG0477	Major facilitator Superfamily
AGRA3207_004617	COG4585	Histidine kinase
AGRA3207_004618	COG2197	response regulator
AGRA3207_004634	COG0791	NLP P60 protein
AGRA3207_004634	COG3883	PFAM NLP P60 protein
AGRA3207_004635	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AGRA3207_004636	COG2027	D-alanyl-D-alanine carboxypeptidase
AGRA3207_004638	COG0037	tRNA processing
AGRA3207_004639	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AGRA3207_004641	COG0302	gtp cyclohydrolase
AGRA3207_004642	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AGRA3207_004644	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AGRA3207_004645	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AGRA3207_004647	COG0649	NAD binding
AGRA3207_004650	COG0596	Alpha beta hydrolase
AGRA3207_004652	COG2124	cytochrome p450
AGRA3207_004654	COG4585	Histidine kinase
AGRA3207_004655	COG2197	response regulator
AGRA3207_004657	COG1136	(ABC) transporter
AGRA3207_004658	COG0577	efflux transmembrane transporter activity
AGRA3207_004660	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AGRA3207_004662	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AGRA3207_004664	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AGRA3207_004665	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AGRA3207_004667	COG1609	Transcriptional regulator
AGRA3207_004670	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AGRA3207_004676	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AGRA3207_004681	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
AGRA3207_004682	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AGRA3207_004683	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AGRA3207_004684	COG0500	methyltransferase
AGRA3207_004685	COG1082	Xylose isomerase domain protein TIM barrel
AGRA3207_004689	COG1316	TRANSCRIPTIONal
AGRA3207_004690	COG0506	proline dehydrogenase activity
AGRA3207_004691	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AGRA3207_004694	COG0577	efflux transmembrane transporter activity
AGRA3207_004694	COG1136	(ABC) transporter
AGRA3207_004695	COG0577	efflux transmembrane transporter activity
AGRA3207_004695	COG1136	(ABC) transporter
AGRA3207_004697	COG0123	including yeast histone deacetylase and acetoin utilization protein
AGRA3207_004704	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AGRA3207_004707	COG1595	DNA-templated transcription, initiation
AGRA3207_004710	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AGRA3207_004712	COG0181	hydroxymethylbilane synthase activity
AGRA3207_004714	COG0113	porphobilinogen synthase activity
AGRA3207_004717	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AGRA3207_004718	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGRA3207_004719	COG0697	spore germination
AGRA3207_004721	COG0406	alpha-ribazole phosphatase activity
AGRA3207_004722	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AGRA3207_004723	COG0785	Cytochrome C biogenesis protein
AGRA3207_004724	COG1333	cytochrome c biogenesis protein
AGRA3207_004725	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AGRA3207_004730	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AGRA3207_004732	COG2226	methyltransferase
AGRA3207_004735	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004736	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004737	COG0649	NAD binding
AGRA3207_004740	COG1034	ATP synthesis coupled electron transport
AGRA3207_004741	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AGRA3207_004742	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004744	COG0713	ATP synthesis coupled electron transport
AGRA3207_004745	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AGRA3207_004748	COG0142	geranyltranstransferase activity
AGRA3207_004752	COG5002	protein histidine kinase activity
AGRA3207_004755	COG2124	cytochrome p450
AGRA3207_004758	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AGRA3207_004766	COG2197	response regulator
AGRA3207_004767	COG4585	Histidine kinase
AGRA3207_004775	COG1013	pyruvate-flavodoxin oxidoreductase activity
AGRA3207_004776	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AGRA3207_004776	COG0674	pyruvate-flavodoxin oxidoreductase activity
AGRA3207_004779	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004780	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004781	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004784	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004785	COG0839	Belongs to the complex I subunit 6 family
AGRA3207_004786	COG0713	ATP synthesis coupled electron transport
AGRA3207_004788	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_004789	COG1007	ATP synthesis coupled electron transport
AGRA3207_004790	COG0501	Belongs to the peptidase M48B family
AGRA3207_004792	COG0640	Transcriptional regulator
AGRA3207_004795	COG1666	GTP binding
AGRA3207_004813	COG1609	Transcriptional regulator
AGRA3207_004817	COG0789	Transcriptional regulator
AGRA3207_004826	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AGRA3207_004827	COG2030	dehydratase
AGRA3207_004829	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AGRA3207_004830	COG2119	membrane
AGRA3207_004831	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AGRA3207_004833	COG1595	DNA-templated transcription, initiation
AGRA3207_004835	COG0436	Aminotransferase
AGRA3207_004837	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AGRA3207_004839	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AGRA3207_004840	COG0081	regulation of translation
AGRA3207_004843	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AGRA3207_004844	COG0222	ribosome binding
AGRA3207_004845	COG1127	ABC transporter
AGRA3207_004846	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AGRA3207_004847	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AGRA3207_004856	COG0085	RNA polymerase activity
AGRA3207_004857	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AGRA3207_004860	COG0667	Aldo Keto reductase
AGRA3207_004862	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AGRA3207_004863	COG0049	tRNA binding
AGRA3207_004864	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AGRA3207_004865	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AGRA3207_004866	COG0051	transcription antitermination factor activity, RNA binding
AGRA3207_004867	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AGRA3207_004868	COG0088	Forms part of the polypeptide exit tunnel
AGRA3207_004869	COG0089	rRNA binding
AGRA3207_004870	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AGRA3207_004871	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AGRA3207_004872	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AGRA3207_004873	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AGRA3207_004874	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AGRA3207_004875	COG0255	Belongs to the universal ribosomal protein uL29 family
AGRA3207_004876	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AGRA3207_004877	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AGRA3207_004878	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AGRA3207_004879	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AGRA3207_004880	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AGRA3207_004881	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AGRA3207_004882	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AGRA3207_004883	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AGRA3207_004884	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AGRA3207_004886	COG0200	Binds to the 23S rRNA
AGRA3207_004887	COG0201	protein transport
AGRA3207_004888	COG0563	adenylate kinase activity
AGRA3207_004891	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AGRA3207_004893	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AGRA3207_004894	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AGRA3207_004895	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AGRA3207_004896	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AGRA3207_004897	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AGRA3207_004898	COG0202	RNA polymerase activity
AGRA3207_004899	COG0203	ribosomal protein L17
AGRA3207_004900	COG0101	tRNA pseudouridine synthase activity
AGRA3207_004904	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AGRA3207_004905	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AGRA3207_004906	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AGRA3207_004910	COG1131	(ABC) transporter
AGRA3207_004918	COG3831	ATPase activity
AGRA3207_004919	COG1072	(Pantothenic acid kinase))
AGRA3207_004920	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AGRA3207_004927	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AGRA3207_004929	COG0802	atpase or kinase
AGRA3207_004931	COG1214	PFAM Peptidase M22, glycoprotease
AGRA3207_004931	COG0456	acetyltransferase
AGRA3207_004933	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AGRA3207_004937	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AGRA3207_004938	COG0459	protein refolding
AGRA3207_004939	COG1595	DNA-templated transcription, initiation
AGRA3207_004943	COG0516	GMP reductase activity
AGRA3207_004944	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AGRA3207_004947	COG1309	transcriptional regulator
AGRA3207_004948	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_004954	COG0519	Catalyzes the synthesis of GMP from XMP
AGRA3207_004954	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AGRA3207_004955	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AGRA3207_004956	COG0450	alkyl hydroperoxide reductase
AGRA3207_004958	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AGRA3207_004959	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AGRA3207_004968	COG1132	(ABC) transporter
AGRA3207_004969	COG0493	'glutamate synthase
AGRA3207_004969	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
AGRA3207_004978	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AGRA3207_004979	COG1215	transferase activity, transferring glycosyl groups
AGRA3207_004983	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AGRA3207_004984	COG2188	Transcriptional regulator
AGRA3207_004989	COG0300	oxidoreductase activity
AGRA3207_004995	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_005001	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_005002	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_005010	COG2197	response regulator
AGRA3207_005013	COG0384	phenazine biosynthesis protein PhzF
AGRA3207_005019	COG1132	(ABC) transporter
AGRA3207_005024	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AGRA3207_005025	COG0395	ABC-type sugar transport system, permease component
AGRA3207_005026	COG1175	transmembrane transport
AGRA3207_005028	COG1063	alcohol dehydrogenase
AGRA3207_005040	COG1595	DNA-templated transcription, initiation
AGRA3207_005048	COG2176	DNA-directed DNA polymerase activity
AGRA3207_005050	COG0640	Transcriptional regulator
AGRA3207_005054	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AGRA3207_005055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGRA3207_005061	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_005062	COG2186	Transcriptional regulator
AGRA3207_005066	COG0235	Class ii aldolase
AGRA3207_005067	COG2267	carboxylic ester hydrolase activity
AGRA3207_005068	COG2267	carboxylic ester hydrolase activity
AGRA3207_005070	COG1414	Transcriptional regulator
AGRA3207_005071	COG4213	ABC transporter substrate-binding protein
AGRA3207_005072	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGRA3207_005073	COG1129	ABC transporter
AGRA3207_005077	COG0145	ligase activity
AGRA3207_005082	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGRA3207_005084	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AGRA3207_005085	COG1414	Transcriptional regulator
AGRA3207_005091	COG3629	intracellular signal transduction
AGRA3207_005094	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGRA3207_005095	COG1228	amidohydrolase
AGRA3207_005100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_005101	COG2124	cytochrome p450
AGRA3207_005104	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_005109	COG3321	synthase
AGRA3207_005109	COG0604	alcohol dehydrogenase
AGRA3207_005116	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AGRA3207_005117	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_005117	COG1672	PFAM Archaeal ATPase
AGRA3207_005118	COG0702	epimerase
AGRA3207_005119	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AGRA3207_005133	COG1902	pentaerythritol trinitrate reductase activity
AGRA3207_005140	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_005142	COG1024	Enoyl-CoA hydratase
AGRA3207_005143	COG0688	phosphatidylethanolamine metabolic process
AGRA3207_005148	COG0583	DNA-binding transcription factor activity
AGRA3207_005149	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_005150	COG2318	DinB family
AGRA3207_005153	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AGRA3207_005154	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGRA3207_005155	COG2205	protein histidine kinase activity
AGRA3207_005156	COG0745	RESPONSE REGULATOR receiver
AGRA3207_005157	COG0242	peptide deformylase activity
AGRA3207_005160	COG0464	growth
AGRA3207_005162	COG1392	Phosphate transport regulator
AGRA3207_005164	COG0737	Belongs to the 5'-nucleotidase family
AGRA3207_005164	COG4085	toxin activity
AGRA3207_005164	COG1525	nuclease
AGRA3207_005165	COG0456	acetyltransferase
AGRA3207_005166	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AGRA3207_005169	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AGRA3207_005170	COG0745	RESPONSE REGULATOR receiver
AGRA3207_005183	COG1404	Belongs to the peptidase S8 family
AGRA3207_005188	COG1674	ftsk spoiiie
AGRA3207_005191	COG4842	Belongs to the WXG100 family
AGRA3207_005192	COG4842	Belongs to the WXG100 family
AGRA3207_005195	COG1404	Belongs to the peptidase S8 family
AGRA3207_005201	COG1316	TRANSCRIPTIONal
AGRA3207_005218	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AGRA3207_005219	COG3442	glutamine amidotransferase
AGRA3207_005230	COG0515	serine threonine protein kinase
AGRA3207_005236	COG4044	May play a role in the intracellular transport of hydrophobic ligands
AGRA3207_005238	COG0354	folic acid binding
AGRA3207_005240	COG1490	D-aminoacyl-tRNA deacylase activity
AGRA3207_005241	COG3246	L-lysine catabolic process to acetate
AGRA3207_005244	COG2807	transmembrane transport
AGRA3207_005253	COG1271	oxidase subunit
AGRA3207_005258	COG0180	Tryptophanyl-tRNA synthetase
AGRA3207_005263	COG3384	dioxygenase
AGRA3207_005269	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_005271	COG0588	phosphoglycerate mutase activity
AGRA3207_005272	COG0596	Alpha beta hydrolase
AGRA3207_005273	COG3903	Transcriptional regulator
AGRA3207_005273	COG3629	intracellular signal transduction
AGRA3207_005276	COG5002	protein histidine kinase activity
AGRA3207_005281	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AGRA3207_005287	COG0596	Alpha beta hydrolase
AGRA3207_005288	COG0215	cysteine-tRNA ligase activity
AGRA3207_005289	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AGRA3207_005290	COG0697	spore germination
AGRA3207_005291	COG4941	Belongs to the sigma-70 factor family
AGRA3207_005294	COG0582	viral genome integration into host DNA
AGRA3207_005310	COG3903	Transcriptional regulator
AGRA3207_005310	COG3629	intracellular signal transduction
AGRA3207_005316	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_005320	COG0494	nUDIX hydrolase
AGRA3207_005321	COG0406	alpha-ribazole phosphatase activity
AGRA3207_005323	COG1522	sequence-specific DNA binding
AGRA3207_005327	COG1309	transcriptional regulator
AGRA3207_005328	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_005328	COG2030	dehydratase
AGRA3207_005329	COG3396	Phenylacetate-CoA oxygenase
AGRA3207_005330	COG3460	Phenylacetate-CoA oxygenase
AGRA3207_005331	COG3396	Phenylacetate-CoA oxygenase
AGRA3207_005332	COG2151	metal-sulfur cluster biosynthetic enzyme
AGRA3207_005333	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AGRA3207_005337	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AGRA3207_005338	COG1404	Belongs to the peptidase S8 family
AGRA3207_005344	COG1695	Transcriptional regulator
AGRA3207_005346	COG1595	DNA-templated transcription, initiation
AGRA3207_005348	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AGRA3207_005349	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AGRA3207_005353	COG1278	Cold shock
AGRA3207_005355	COG0459	protein refolding
AGRA3207_005361	COG1061	Type III restriction enzyme res subunit
AGRA3207_005364	COG1309	transcriptional regulator
AGRA3207_005367	COG1278	Cold shock
AGRA3207_005368	COG2814	Major facilitator Superfamily
AGRA3207_005374	COG2814	Major facilitator Superfamily
AGRA3207_005375	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AGRA3207_005381	COG0259	pyridoxamine-phosphate oxidase activity
AGRA3207_005382	COG0477	Major facilitator Superfamily
AGRA3207_005383	COG1573	uracil-dna glycosylase
AGRA3207_005387	COG2226	methyltransferase
AGRA3207_005390	COG0183	Belongs to the thiolase family
AGRA3207_005391	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AGRA3207_005392	COG0095	Lipoate-protein ligase
AGRA3207_005395	COG1672	PFAM Archaeal ATPase
AGRA3207_005395	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGRA3207_005397	COG1131	(ABC) transporter
AGRA3207_005398	COG1725	Transcriptional regulator
AGRA3207_005400	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AGRA3207_005401	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_005402	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_005405	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_005406	COG0018	arginyl-trna synthetase
AGRA3207_005407	COG0416	fatty acid biosynthetic process
AGRA3207_005415	COG1881	PFAM PEBP family protein
AGRA3207_005416	COG1388	LysM domain
AGRA3207_005416	COG1134	teichoic acid transport
AGRA3207_005418	COG1597	lipid kinase activity
AGRA3207_005425	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_005426	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGRA3207_005428	COG0442	prolyl-tRNA aminoacylation
AGRA3207_005435	COG1595	DNA-templated transcription, initiation
AGRA3207_005438	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_005438	COG2208	phosphoserine phosphatase activity
AGRA3207_005438	COG2172	sigma factor antagonist activity
AGRA3207_005444	COG0612	Peptidase, M16
AGRA3207_005445	COG1366	Belongs to the anti-sigma-factor antagonist family
AGRA3207_005453	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AGRA3207_005455	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AGRA3207_005458	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AGRA3207_005459	COG4941	Belongs to the sigma-70 factor family
AGRA3207_005465	COG1674	ftsk spoiiie
AGRA3207_005482	COG1136	(ABC) transporter
AGRA3207_005487	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_005489	COG3012	SEC-C Motif Domain Protein
AGRA3207_005492	COG1129	ABC transporter
AGRA3207_005494	COG2226	methyltransferase
AGRA3207_005497	COG0702	epimerase
AGRA3207_005498	COG0789	Transcriptional regulator
AGRA3207_005509	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AGRA3207_005510	COG1518	maintenance of DNA repeat elements
AGRA3207_005518	COG1876	peptidase activity
AGRA3207_005519	COG1970	mechanosensitive ion channel activity
AGRA3207_005521	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AGRA3207_005522	COG2409	Drug exporters of the RND superfamily
AGRA3207_005524	COG3263	regulation of cellular component size
AGRA3207_005525	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AGRA3207_005526	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AGRA3207_005528	COG0315	cyclic pyranopterin monophosphate synthase activity
AGRA3207_005529	COG0521	Mo-molybdopterin cofactor biosynthetic process
AGRA3207_005530	COG1349	DNA-binding transcription factor activity
AGRA3207_005531	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AGRA3207_005542	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
AGRA3207_005545	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AGRA3207_005546	COG2176	DNA-directed DNA polymerase activity
AGRA3207_005549	COG3485	protocatechuate 3,4-dioxygenase
AGRA3207_005550	COG1454	alcohol dehydrogenase
AGRA3207_005552	COG2084	Dehydrogenase
AGRA3207_005556	COG0747	negative chemotaxis
AGRA3207_005558	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGRA3207_005562	COG1802	Transcriptional regulator
AGRA3207_005563	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AGRA3207_005564	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_005571	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AGRA3207_005578	COG1396	sequence-specific DNA binding
AGRA3207_005580	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGRA3207_005585	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_005586	COG1063	alcohol dehydrogenase
AGRA3207_005587	COG2814	Major facilitator Superfamily
AGRA3207_005591	COG0375	protein maturation
AGRA3207_005593	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AGRA3207_005600	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AGRA3207_005602	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AGRA3207_005604	COG0409	Hydrogenase expression formation protein
AGRA3207_005611	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_005612	COG1695	Transcriptional regulator
AGRA3207_005626	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_005631	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AGRA3207_005632	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
AGRA3207_005634	COG0154	amidase activity
AGRA3207_005635	COG0358	DNA primase activity
AGRA3207_005638	COG0598	Magnesium transport protein CorA
AGRA3207_005639	COG1609	Transcriptional regulator
AGRA3207_005648	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AGRA3207_005649	COG0084	hydrolase, TatD family'
AGRA3207_005651	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AGRA3207_005653	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AGRA3207_005656	COG0488	(ABC) transporter
AGRA3207_005658	COG0667	Aldo Keto reductase
AGRA3207_005659	COG4106	trans-aconitate 2-methyltransferase activity
AGRA3207_005660	COG1309	transcriptional regulator
AGRA3207_005663	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AGRA3207_005664	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AGRA3207_005665	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AGRA3207_005666	COG0193	aminoacyl-tRNA hydrolase activity
AGRA3207_005668	COG1218	3'(2'),5'-bisphosphate nucleotidase
AGRA3207_005687	COG0730	response to heat
AGRA3207_005688	COG0529	Catalyzes the synthesis of activated sulfate
AGRA3207_005693	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AGRA3207_005694	COG0604	alcohol dehydrogenase
AGRA3207_005696	COG2205	protein histidine kinase activity
AGRA3207_005698	COG1116	anion transmembrane transporter activity
AGRA3207_005700	COG0148	phosphopyruvate hydratase activity
AGRA3207_005707	COG1252	NADH dehydrogenase
AGRA3207_005708	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AGRA3207_005712	COG0183	Belongs to the thiolase family
AGRA3207_005716	COG2755	lipolytic protein G-D-S-L family
AGRA3207_005719	COG0531	amino acid
AGRA3207_005723	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_005732	COG2409	Drug exporters of the RND superfamily
AGRA3207_005734	COG0657	acetylesterase activity
AGRA3207_005734	COG2755	lipolytic protein G-D-S-L family
AGRA3207_005737	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
AGRA3207_005740	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AGRA3207_005744	COG1714	RDD family
AGRA3207_005745	COG1714	RDD family
AGRA3207_005746	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AGRA3207_005748	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AGRA3207_005750	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AGRA3207_005753	COG1234	tRNA 3'-trailer cleavage
AGRA3207_005754	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AGRA3207_005755	COG1331	Highly conserved protein containing a thioredoxin domain
AGRA3207_005757	COG1309	transcriptional regulator
AGRA3207_005758	COG0477	Major facilitator Superfamily
AGRA3207_005760	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AGRA3207_005761	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AGRA3207_005763	COG0114	fumarate hydratase activity
AGRA3207_005765	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AGRA3207_005765	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AGRA3207_005771	COG1131	(ABC) transporter
AGRA3207_005776	COG1722	exodeoxyribonuclease VII activity
AGRA3207_005777	COG1570	exodeoxyribonuclease VII activity
AGRA3207_005780	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AGRA3207_005782	COG1322	Protein conserved in bacteria
AGRA3207_005783	COG0012	GTP binding
AGRA3207_005793	COG0494	nUDIX hydrolase
AGRA3207_005794	COG0791	NLP P60 protein
AGRA3207_005795	COG1217	gtp-binding protein TYPA
AGRA3207_005798	COG0542	response to heat
AGRA3207_005802	COG1316	TRANSCRIPTIONal
AGRA3207_005806	COG1053	succinate dehydrogenase
AGRA3207_005811	COG0583	DNA-binding transcription factor activity
AGRA3207_005815	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AGRA3207_005816	COG1053	succinate dehydrogenase
AGRA3207_005819	COG1132	(ABC) transporter
AGRA3207_005820	COG1132	(ABC) transporter
AGRA3207_005823	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AGRA3207_005828	COG1316	TRANSCRIPTIONal
AGRA3207_005830	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AGRA3207_005833	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AGRA3207_005838	COG1674	ftsk spoiiie
AGRA3207_005838	COG1674	ftsk spoiiie
AGRA3207_005839	COG2255	four-way junction helicase activity
AGRA3207_005848	COG0215	cysteine-tRNA ligase activity
AGRA3207_005849	COG2226	methyltransferase
AGRA3207_005849	COG1073	alpha beta
AGRA3207_005859	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AGRA3207_005861	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_005868	COG0443	Heat shock 70 kDa protein
AGRA3207_005875	COG1129	ABC transporter
AGRA3207_005875	COG0842	Transport permease protein
AGRA3207_005879	COG2171	N-acyltransferase activity
AGRA3207_005881	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGRA3207_005885	COG1611	Belongs to the LOG family
AGRA3207_005886	COG1611	Belongs to the LOG family
AGRA3207_005888	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AGRA3207_005891	COG2818	Glycosylase
AGRA3207_005893	COG1136	(ABC) transporter
AGRA3207_005893	COG0577	efflux transmembrane transporter activity
AGRA3207_005894	COG1024	Enoyl-CoA hydratase
AGRA3207_005896	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AGRA3207_005897	COG1595	DNA-templated transcription, initiation
AGRA3207_005900	COG4122	O-methyltransferase activity
AGRA3207_005904	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGRA3207_005905	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AGRA3207_005907	COG1846	Transcriptional regulator
AGRA3207_005909	COG2239	Acts as a magnesium transporter
AGRA3207_005917	COG0613	PHP domain protein
AGRA3207_005921	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AGRA3207_005923	COG0513	Belongs to the DEAD box helicase family
AGRA3207_005929	COG1793	dna ligase
AGRA3207_005929	COG3285	dna ligase
AGRA3207_005930	COG1793	dna ligase
AGRA3207_005930	COG3285	dna ligase
AGRA3207_005931	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AGRA3207_005934	COG2409	Drug exporters of the RND superfamily
AGRA3207_005937	COG2197	response regulator
AGRA3207_005943	COG0210	DNA helicase
AGRA3207_005944	COG2226	methyltransferase
AGRA3207_005946	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_005947	COG0019	diaminopimelate decarboxylase activity
AGRA3207_005949	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AGRA3207_005956	COG1946	Acyl-CoA thioesterase
AGRA3207_005960	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AGRA3207_005967	COG1615	UPF0182 protein
AGRA3207_005970	COG3480	Lon protease (S16) C-terminal proteolytic domain
AGRA3207_005974	COG2205	protein histidine kinase activity
AGRA3207_005975	COG0745	RESPONSE REGULATOR receiver
AGRA3207_005979	COG0506	proline dehydrogenase activity
AGRA3207_005980	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_005982	COG2176	DNA-directed DNA polymerase activity
AGRA3207_005982	COG5002	protein histidine kinase activity
AGRA3207_005985	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_005993	COG1733	regulation of RNA biosynthetic process
AGRA3207_005994	COG0596	Alpha beta hydrolase
AGRA3207_005996	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_005999	COG0579	oxidoreductase
AGRA3207_006001	COG0483	inositol monophosphate 1-phosphatase activity
AGRA3207_006003	COG0277	FAD linked oxidase domain protein
AGRA3207_006005	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AGRA3207_006010	COG2135	peptidase activity
AGRA3207_006012	COG1595	DNA-templated transcription, initiation
AGRA3207_006013	COG5662	AntiSigma factor
AGRA3207_006014	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGRA3207_006015	COG2199	diguanylate cyclase activity
AGRA3207_006015	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AGRA3207_006017	COG0439	Biotin carboxylase
AGRA3207_006020	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AGRA3207_006021	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AGRA3207_006023	COG2188	Transcriptional regulator
AGRA3207_006024	COG0156	8-amino-7-oxononanoate synthase activity
AGRA3207_006030	COG2172	sigma factor antagonist activity
AGRA3207_006036	COG0281	malic enzyme
AGRA3207_006037	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_006038	COG0765	amino acid transport
AGRA3207_006039	COG1126	abc transporter atp-binding protein
AGRA3207_006041	COG0604	alcohol dehydrogenase
AGRA3207_006045	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGRA3207_006045	COG0567	Dehydrogenase, E1 component
AGRA3207_006048	COG0586	Pfam SNARE associated Golgi protein
AGRA3207_006053	COG2018	Roadblock/LC7 domain
AGRA3207_006057	COG2018	Roadblock/LC7 domain
AGRA3207_006088	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_006089	COG0667	Aldo Keto reductase
AGRA3207_006095	COG2226	methyltransferase
AGRA3207_006096	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_006098	COG1063	alcohol dehydrogenase
AGRA3207_006099	COG2814	Major facilitator Superfamily
AGRA3207_006105	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AGRA3207_006106	COG0463	Glycosyl transferase, family 2
AGRA3207_006113	COG3835	regulator
AGRA3207_006115	COG2351	hydroxyisourate hydrolase activity
AGRA3207_006120	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AGRA3207_006121	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AGRA3207_006122	COG4266	Belongs to the allantoicase family
AGRA3207_006125	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGRA3207_006126	COG2188	Transcriptional regulator
AGRA3207_006129	COG1309	transcriptional regulator
AGRA3207_006130	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_006131	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_006132	COG1309	transcriptional regulator
AGRA3207_006133	COG0477	Major facilitator Superfamily
AGRA3207_006135	COG3572	ergothioneine biosynthetic process
AGRA3207_006136	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AGRA3207_006138	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
AGRA3207_006139	COG2755	lipolytic protein G-D-S-L family
AGRA3207_006143	COG1609	Transcriptional regulator
AGRA3207_006144	COG0517	IMP dehydrogenase activity
AGRA3207_006144	COG1125	glycine betaine transport
AGRA3207_006145	COG1174	glycine betaine transport
AGRA3207_006146	COG1174	glycine betaine transport
AGRA3207_006149	COG2197	response regulator
AGRA3207_006150	COG4585	Histidine kinase
AGRA3207_006153	COG2986	histidine ammonia-lyase
AGRA3207_006154	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AGRA3207_006156	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AGRA3207_006157	COG1228	amidohydrolase
AGRA3207_006159	COG0616	signal peptide processing
AGRA3207_006160	COG0515	serine threonine protein kinase
AGRA3207_006160	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AGRA3207_006165	COG2186	Transcriptional regulator
AGRA3207_006166	COG3281	Trehalose synthase
AGRA3207_006167	COG0366	Alpha amylase catalytic
AGRA3207_006168	COG0366	Alpha amylase catalytic
AGRA3207_006169	COG0058	SHG alpha-glucan phosphorylase activity
AGRA3207_006171	COG1476	TRANSCRIPTIONal
AGRA3207_006172	COG4279	zinc finger
AGRA3207_006173	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AGRA3207_006177	COG4221	oxidoreductase activity
AGRA3207_006180	COG0515	serine threonine protein kinase
AGRA3207_006180	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AGRA3207_006183	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AGRA3207_006184	COG0515	serine threonine protein kinase
AGRA3207_006190	COG0482	sulfurtransferase activity
AGRA3207_006192	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AGRA3207_006195	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AGRA3207_006196	COG0154	amidase activity
AGRA3207_006197	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AGRA3207_006198	COG2133	pyrroloquinoline quinone binding
AGRA3207_006199	COG5001	Diguanylate cyclase
AGRA3207_006202	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AGRA3207_006205	COG1136	(ABC) transporter
AGRA3207_006205	COG4591	ABC-type transport system involved in lipoprotein release permease component
AGRA3207_006214	COG0473	3-isopropylmalate dehydrogenase activity
AGRA3207_006215	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AGRA3207_006216	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AGRA3207_006220	COG0179	Fumarylacetoacetate (FAA) hydrolase
AGRA3207_006227	COG2409	Drug exporters of the RND superfamily
AGRA3207_006230	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGRA3207_006232	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AGRA3207_006234	COG0713	ATP synthesis coupled electron transport
AGRA3207_006235	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AGRA3207_006237	COG1007	ATP synthesis coupled electron transport
AGRA3207_006239	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
AGRA3207_006241	COG2149	membrane
AGRA3207_006242	COG0789	Transcriptional regulator
AGRA3207_006243	COG1414	Transcriptional regulator
AGRA3207_006244	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AGRA3207_006245	COG0066	3-isopropylmalate dehydratase activity
AGRA3207_006247	COG0776	regulation of translation
AGRA3207_006249	COG1920	GTP binding
AGRA3207_006251	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AGRA3207_006252	COG1181	Belongs to the D-alanine--D-alanine ligase family
AGRA3207_006262	COG0351	phosphomethylpyrimidine kinase
AGRA3207_006263	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AGRA3207_006266	COG0742	ribosomal rna small subunit methyltransferase
AGRA3207_006268	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AGRA3207_006270	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AGRA3207_006271	COG0571	ribonuclease III activity
AGRA3207_006272	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AGRA3207_006273	COG1254	Belongs to the acylphosphatase family
AGRA3207_006275	COG1196	nuclear chromosome segregation
AGRA3207_006277	COG4585	Histidine kinase
AGRA3207_006278	COG2197	response regulator
AGRA3207_006287	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AGRA3207_006289	COG0228	four-way junction DNA binding
AGRA3207_006290	COG1837	Belongs to the UPF0109 family
AGRA3207_006291	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AGRA3207_006292	COG0336	Belongs to the RNA methyltransferase TrmD family
AGRA3207_006293	COG0335	large ribosomal subunit rRNA binding
AGRA3207_006294	COG0681	Belongs to the peptidase S26 family
AGRA3207_006295	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AGRA3207_006299	COG0792	nuclease activity
AGRA3207_006302	COG0052	Belongs to the universal ribosomal protein uS2 family
AGRA3207_006303	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AGRA3207_006304	COG0528	UMP kinase activity
AGRA3207_006305	COG0233	cytoplasmic translational termination
AGRA3207_006308	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AGRA3207_006317	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_006318	COG3842	ATPase activity
AGRA3207_006320	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGRA3207_006321	COG1177	transmembrane transport
AGRA3207_006325	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_006330	COG0515	serine threonine protein kinase
AGRA3207_006333	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AGRA3207_006334	COG0596	Alpha beta hydrolase
AGRA3207_006336	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AGRA3207_006340	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AGRA3207_006342	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AGRA3207_006344	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AGRA3207_006345	COG0596	Alpha beta hydrolase
AGRA3207_006357	COG2205	protein histidine kinase activity
AGRA3207_006358	COG3979	chitinase
AGRA3207_006360	COG1309	transcriptional regulator
AGRA3207_006363	COG1309	transcriptional regulator
AGRA3207_006367	COG1515	deoxyribonuclease V activity
AGRA3207_006369	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AGRA3207_006369	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AGRA3207_006371	COG4585	Histidine kinase
AGRA3207_006372	COG2197	response regulator
AGRA3207_006374	COG2409	Drug exporters of the RND superfamily
AGRA3207_006380	COG4213	ABC transporter substrate-binding protein
AGRA3207_006382	COG4214	carbohydrate transport
AGRA3207_006384	COG1940	carbohydrate kinase activity
AGRA3207_006392	COG0779	Required for maturation of 30S ribosomal subunits
AGRA3207_006395	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AGRA3207_006397	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AGRA3207_006398	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AGRA3207_006399	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AGRA3207_006402	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AGRA3207_006403	COG1185	polyribonucleotide nucleotidyltransferase activity
AGRA3207_006404	COG0612	Peptidase, M16
AGRA3207_006406	COG1950	PFAM Membrane protein of
AGRA3207_006407	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AGRA3207_006409	COG1595	DNA-templated transcription, initiation
AGRA3207_006412	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AGRA3207_006414	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AGRA3207_006421	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AGRA3207_006422	COG0697	spore germination
AGRA3207_006435	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGRA3207_006436	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AGRA3207_006437	COG1674	ftsk spoiiie
AGRA3207_006439	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AGRA3207_006442	COG1546	Belongs to the CinA family
AGRA3207_006442	COG1058	Belongs to the CinA family
AGRA3207_006443	COG1396	sequence-specific DNA binding
AGRA3207_006444	COG0783	Belongs to the Dps family
AGRA3207_006446	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AGRA3207_006449	COG0395	ABC-type sugar transport system, permease component
AGRA3207_006450	COG1175	transmembrane transport
AGRA3207_006453	COG0653	protein targeting
AGRA3207_006454	COG1201	RNA secondary structure unwinding
AGRA3207_006457	COG0754	glutathionylspermidine amidase activity
AGRA3207_006461	COG2137	regulation of response to DNA damage stimulus
AGRA3207_006462	COG1418	mRNA catabolic process
AGRA3207_006463	COG1073	alpha beta
AGRA3207_006464	COG0765	amino acid transport
AGRA3207_006465	COG0765	amino acid transport
AGRA3207_006466	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_006467	COG1126	abc transporter atp-binding protein
AGRA3207_006468	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AGRA3207_006471	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AGRA3207_006472	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AGRA3207_006474	COG1309	transcriptional regulator
AGRA3207_006481	COG0247	lactate metabolic process
AGRA3207_006482	COG0277	FAD linked oxidase domain protein
AGRA3207_006483	COG0277	FAD linked oxidase domain protein
AGRA3207_006484	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AGRA3207_006485	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AGRA3207_006486	COG1228	amidohydrolase
AGRA3207_006488	COG1555	photosystem II stabilization
AGRA3207_006488	COG1596	polysaccharide export
AGRA3207_006490	COG1742	UPF0060 membrane protein
AGRA3207_006491	COG0789	Transcriptional regulator
AGRA3207_006494	COG0583	DNA-binding transcription factor activity
AGRA3207_006496	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
AGRA3207_006497	COG0268	Binds directly to 16S ribosomal RNA
AGRA3207_006498	COG0481	GTPase activity
AGRA3207_006507	COG1420	regulation of RNA biosynthetic process
AGRA3207_006508	COG0484	heat shock protein binding
AGRA3207_006512	COG0537	adenosine 5'-monophosphoramidase activity
AGRA3207_006514	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AGRA3207_006517	COG2409	Drug exporters of the RND superfamily
AGRA3207_006518	COG3903	Transcriptional regulator
AGRA3207_006518	COG3629	intracellular signal transduction
AGRA3207_006519	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AGRA3207_006522	COG1834	amidinotransferase
AGRA3207_006523	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AGRA3207_006526	COG1381	Involved in DNA repair and RecF pathway recombination
AGRA3207_006527	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AGRA3207_006528	COG1764	response to oxidative stress
AGRA3207_006530	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AGRA3207_006531	COG1121	(ABC) transporter
AGRA3207_006536	COG0423	glycine-tRNA ligase activity
AGRA3207_006537	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AGRA3207_006537	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AGRA3207_006539	COG3387	PFAM Glycoside hydrolase 15-related
AGRA3207_006540	COG0574	Belongs to the PEP-utilizing enzyme family
AGRA3207_006540	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AGRA3207_006542	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AGRA3207_006544	COG2223	nitrite transmembrane transporter activity
AGRA3207_006546	COG1595	DNA-templated transcription, initiation
AGRA3207_006547	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AGRA3207_006548	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_006554	COG3842	ATPase activity
AGRA3207_006556	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGRA3207_006558	COG0358	DNA primase activity
AGRA3207_006559	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AGRA3207_006560	COG0393	Putative heavy-metal-binding
AGRA3207_006562	COG2837	iron assimilation
AGRA3207_006570	COG1358	cellular component organization or biogenesis
AGRA3207_006572	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
AGRA3207_006576	COG1733	regulation of RNA biosynthetic process
AGRA3207_006581	COG3903	Transcriptional regulator
AGRA3207_006581	COG3629	intracellular signal transduction
AGRA3207_006583	COG2197	response regulator
AGRA3207_006584	COG4585	Histidine kinase
AGRA3207_006585	COG2409	Drug exporters of the RND superfamily
AGRA3207_006589	COG2409	Drug exporters of the RND superfamily
AGRA3207_006592	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGRA3207_006593	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGRA3207_006602	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGRA3207_006604	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_006606	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_006608	COG1024	Enoyl-CoA hydratase
AGRA3207_006609	COG3842	ATPase activity
AGRA3207_006610	COG1177	transmembrane transport
AGRA3207_006611	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGRA3207_006616	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AGRA3207_006619	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGRA3207_006621	COG2072	flavoprotein involved in K transport
AGRA3207_006629	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AGRA3207_006634	COG0405	Gamma-glutamyltransferase
AGRA3207_006637	COG1937	Protein conserved in bacteria
AGRA3207_006638	COG0406	alpha-ribazole phosphatase activity
AGRA3207_006640	COG1929	Belongs to the glycerate kinase type-1 family
AGRA3207_006641	COG2252	PERMEase
AGRA3207_006642	COG3835	regulator
AGRA3207_006646	COG3336	cytochrome c oxidase
AGRA3207_006647	COG4585	Histidine kinase
AGRA3207_006648	COG2197	response regulator
AGRA3207_006649	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_006651	COG0745	RESPONSE REGULATOR receiver
AGRA3207_006654	COG1733	regulation of RNA biosynthetic process
AGRA3207_006664	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AGRA3207_006665	COG0477	Major facilitator Superfamily
AGRA3207_006666	COG1309	transcriptional regulator
AGRA3207_006668	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AGRA3207_006668	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AGRA3207_006672	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_006673	COG0765	amino acid transport
AGRA3207_006674	COG1126	abc transporter atp-binding protein
AGRA3207_006675	COG0174	glutamine synthetase
AGRA3207_006676	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AGRA3207_006692	COG1714	RDD family
AGRA3207_006694	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AGRA3207_006696	COG0321	lipoyl(octanoyl) transferase activity
AGRA3207_006697	COG3340	Belongs to the peptidase S51 family
AGRA3207_006700	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AGRA3207_006701	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AGRA3207_006702	COG2188	Transcriptional regulator
AGRA3207_006708	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
AGRA3207_006711	COG0667	Aldo Keto reductase
AGRA3207_006715	COG0501	Belongs to the peptidase M48B family
AGRA3207_006717	COG0501	Belongs to the peptidase M48B family
AGRA3207_006719	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AGRA3207_006721	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGRA3207_006723	COG1104	cysteine desulfurase activity
AGRA3207_006724	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AGRA3207_006725	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGRA3207_006727	COG1376	ErfK ybiS ycfS ynhG family protein
AGRA3207_006728	COG0501	Belongs to the peptidase M48B family
AGRA3207_006731	COG0791	NLP P60 protein
AGRA3207_006738	COG3842	ATPase activity
AGRA3207_006739	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AGRA3207_006740	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGRA3207_006741	COG1177	transmembrane transport
AGRA3207_006742	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AGRA3207_006744	COG1845	cytochrome c oxidase, subunit III
AGRA3207_006745	COG2010	Cytochrome c
AGRA3207_006746	COG0723	plastoquinol--plastocyanin reductase activity
AGRA3207_006747	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AGRA3207_006748	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_006758	COG3142	Participates in the control of copper homeostasis
AGRA3207_006762	COG1940	carbohydrate kinase activity
AGRA3207_006767	COG2197	response regulator
AGRA3207_006769	COG0301	tRNA thio-modification
AGRA3207_006772	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AGRA3207_006773	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AGRA3207_006774	COG3275	phosphorelay sensor kinase activity
AGRA3207_006777	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AGRA3207_006778	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AGRA3207_006779	COG0515	serine threonine protein kinase
AGRA3207_006779	COG2815	serine threonine protein kinase
AGRA3207_006780	COG0697	spore germination
AGRA3207_006781	COG2022	thiamine diphosphate biosynthetic process
AGRA3207_006783	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGRA3207_006783	COG2022	thiamine diphosphate biosynthetic process
AGRA3207_006786	COG0352	thiamine-phosphate diphosphorylase activity
AGRA3207_006789	COG0142	geranyltranstransferase activity
AGRA3207_006798	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AGRA3207_006800	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AGRA3207_006801	COG0540	Belongs to the ATCase OTCase family
AGRA3207_006802	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AGRA3207_006803	COG0505	Belongs to the CarA family
AGRA3207_006804	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AGRA3207_006805	COG0543	2 iron, 2 sulfur cluster binding
AGRA3207_006806	COG0167	dihydroorotate dehydrogenase activity
AGRA3207_006807	COG0284	orotidine-5'-phosphate decarboxylase activity
AGRA3207_006809	COG0194	GDP metabolic process
AGRA3207_006810	COG1758	RNA polymerase activity
AGRA3207_006812	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AGRA3207_006814	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AGRA3207_006816	COG0242	peptide deformylase activity
AGRA3207_006817	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AGRA3207_006819	COG0671	phosphoesterase, PA-phosphatase related
AGRA3207_006820	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AGRA3207_006821	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AGRA3207_006824	COG3201	nicotinamide mononucleotide transporter
AGRA3207_006825	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AGRA3207_006825	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AGRA3207_006826	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AGRA3207_006827	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AGRA3207_006837	COG3608	succinylglutamate desuccinylase aspartoacylase
AGRA3207_006837	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AGRA3207_006838	COG0746	molybdenum cofactor guanylyltransferase activity
AGRA3207_006846	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AGRA3207_006847	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AGRA3207_006849	COG2508	Transcriptional regulator
AGRA3207_006850	COG2233	PERMEase
AGRA3207_006854	COG0726	polysaccharide deacetylase
AGRA3207_006860	COG0318	PFAM AMP-dependent synthetase and ligase
AGRA3207_006864	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AGRA3207_006865	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AGRA3207_006866	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AGRA3207_006867	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AGRA3207_006868	COG1024	Enoyl-CoA hydratase
AGRA3207_006869	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_006870	COG0006	proline dipeptidase activity
AGRA3207_006871	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AGRA3207_006872	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AGRA3207_006874	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AGRA3207_006878	COG0714	Associated with various cellular activities
AGRA3207_006879	COG2001	Belongs to the MraZ family
AGRA3207_006880	COG0275	rRNA processing
AGRA3207_006882	COG0768	penicillin binding
AGRA3207_006883	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AGRA3207_006884	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AGRA3207_006885	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AGRA3207_006886	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AGRA3207_006888	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AGRA3207_006889	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AGRA3207_006891	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AGRA3207_006892	COG1496	oxidoreductase activity
AGRA3207_006894	COG1799	cell septum assembly
AGRA3207_006896	COG3599	regulation of cell shape
AGRA3207_006899	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AGRA3207_006901	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AGRA3207_006907	COG0587	DNA-directed DNA polymerase activity
AGRA3207_006911	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AGRA3207_006912	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AGRA3207_006914	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AGRA3207_006915	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AGRA3207_006916	COG0131	Imidazoleglycerol-phosphate dehydratase
AGRA3207_006918	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AGRA3207_006919	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AGRA3207_006920	COG0107	imidazoleglycerol-phosphate synthase activity
AGRA3207_006928	COG1132	(ABC) transporter
AGRA3207_006931	COG1278	Cold shock
AGRA3207_006932	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AGRA3207_006936	COG0134	indole-3-glycerol-phosphate synthase activity
AGRA3207_006937	COG0133	tryptophan synthase activity
AGRA3207_006938	COG0159	tryptophan synthase activity
AGRA3207_006942	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AGRA3207_006946	COG0069	glutamate synthase activity
AGRA3207_006946	COG0070	glutamate synthase
AGRA3207_006946	COG0067	glutamate synthase
AGRA3207_006950	COG0693	protein deglycase activity
AGRA3207_006960	COG2050	protein possibly involved in aromatic compounds catabolism
AGRA3207_006966	COG0237	dephospho-CoA kinase activity
AGRA3207_006967	COG2319	Wd-40 repeat
AGRA3207_006967	COG5635	Nacht domain
AGRA3207_006968	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AGRA3207_006969	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
AGRA3207_006972	COG4585	Histidine kinase
AGRA3207_006973	COG0556	nucleotide-excision repair
AGRA3207_006980	COG1126	abc transporter atp-binding protein
AGRA3207_006981	COG0765	amino acid transport
AGRA3207_006982	COG0765	amino acid transport
AGRA3207_006984	COG5285	phytanoyl-CoA dioxygenase
AGRA3207_006985	COG1917	Cupin 2, conserved barrel domain protein
AGRA3207_006986	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AGRA3207_006987	COG0456	acetyltransferase
AGRA3207_006990	COG0504	CTP synthase activity
AGRA3207_006991	COG0494	nUDIX hydrolase
AGRA3207_006995	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AGRA3207_006996	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AGRA3207_006998	COG4401	Chorismate mutase type I
AGRA3207_007000	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AGRA3207_007001	COG1160	GTP binding
AGRA3207_007009	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
AGRA3207_007014	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AGRA3207_007015	COG0326	Molecular chaperone. Has ATPase activity
AGRA3207_007020	COG1140	nitrate reductase beta subunit
AGRA3207_007023	COG0542	response to heat
AGRA3207_007027	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGRA3207_007038	COG0248	Ppx GppA phosphatase
AGRA3207_007039	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGRA3207_007040	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AGRA3207_007041	COG0583	DNA-binding transcription factor activity
AGRA3207_007044	COG1357	PFAM Pentapeptide repeats (8 copies)
AGRA3207_007046	COG2890	protein-(glutamine-N5) methyltransferase activity
AGRA3207_007051	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_007055	COG0640	Transcriptional regulator
AGRA3207_007057	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AGRA3207_007068	COG2259	Doxx family
AGRA3207_007069	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AGRA3207_007072	COG0477	Major facilitator Superfamily
AGRA3207_007075	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_007078	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AGRA3207_007082	COG1120	ATPase activity
AGRA3207_007083	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGRA3207_007094	COG0640	Transcriptional regulator
AGRA3207_007096	COG1090	epimerase
AGRA3207_007103	COG3397	chitin binding
AGRA3207_007105	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AGRA3207_007106	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
AGRA3207_007111	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AGRA3207_007112	COG1088	dTDP-glucose 4,6-dehydratase activity
AGRA3207_007114	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_007116	COG2197	response regulator
AGRA3207_007118	COG4941	Belongs to the sigma-70 factor family
AGRA3207_007119	COG3795	YCII-related domain
AGRA3207_007120	COG3540	Alkaline phosphatase
AGRA3207_007127	COG2205	protein histidine kinase activity
AGRA3207_007127	COG3437	response regulator, receiver
AGRA3207_007127	COG3850	Histidine kinase
AGRA3207_007127	COG4999	Histidine kinase
AGRA3207_007131	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AGRA3207_007132	COG1304	FMN binding
AGRA3207_007133	COG0402	S-adenosylhomocysteine deaminase activity
AGRA3207_007134	COG2233	PERMEase
AGRA3207_007138	COG0549	Belongs to the carbamate kinase family
AGRA3207_007143	COG2272	Belongs to the type-B carboxylesterase lipase family
AGRA3207_007144	COG2814	Major facilitator Superfamily
AGRA3207_007148	COG0604	alcohol dehydrogenase
AGRA3207_007148	COG3321	synthase
AGRA3207_007149	COG5640	endopeptidase activity
AGRA3207_007150	COG0604	alcohol dehydrogenase
AGRA3207_007151	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AGRA3207_007152	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AGRA3207_007153	COG1024	Enoyl-CoA hydratase
AGRA3207_007155	COG3842	ATPase activity
AGRA3207_007156	COG1177	transmembrane transport
AGRA3207_007159	COG0154	amidase activity
AGRA3207_007161	COG1024	Enoyl-CoA hydratase
AGRA3207_007164	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_007166	COG1228	amidohydrolase
AGRA3207_007167	COG1414	Transcriptional regulator
AGRA3207_007169	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGRA3207_007169	COG0596	Alpha beta hydrolase
AGRA3207_007172	COG0596	Alpha beta hydrolase
AGRA3207_007177	COG0477	Major facilitator Superfamily
AGRA3207_007184	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AGRA3207_007188	COG0583	DNA-binding transcription factor activity
AGRA3207_007190	COG1250	3-hydroxyacyl-CoA dehydrogenase
AGRA3207_007191	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGRA3207_007192	COG1024	Enoyl-CoA hydratase
AGRA3207_007199	COG0154	amidase activity
AGRA3207_007208	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AGRA3207_007213	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AGRA3207_007217	COG1131	(ABC) transporter
AGRA3207_007221	COG0585	pseudouridine synthase activity
AGRA3207_007222	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AGRA3207_007224	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AGRA3207_007235	COG0105	UTP biosynthetic process
AGRA3207_007243	COG0604	alcohol dehydrogenase
AGRA3207_007245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGRA3207_007247	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AGRA3207_007249	COG0515	serine threonine protein kinase
AGRA3207_007251	COG2267	carboxylic ester hydrolase activity
AGRA3207_007255	COG1316	TRANSCRIPTIONal
AGRA3207_007269	COG3293	Transposase
AGRA3207_007275	COG2963	transposase activity
AGRA3207_007276	COG2801	Transposase and inactivated derivatives
AGRA3207_007289	COG1518	maintenance of DNA repeat elements
AGRA3207_007310	COG2801	Transposase and inactivated derivatives
AGRA3207_007317	COG3293	Transposase
AGRA3207_007324	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AGRA3207_007335	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AGRA3207_007355	COG3629	intracellular signal transduction
AGRA3207_007355	COG3903	Transcriptional regulator
AGRA3207_007356	COG0328	RNA-DNA hybrid ribonuclease activity
AGRA3207_007396	COG3293	Transposase
AGRA3207_007402	COG1309	transcriptional regulator
AGRA3207_007408	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_007412	COG2018	Roadblock/LC7 domain
AGRA3207_007418	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGRA3207_007426	COG0720	synthase
AGRA3207_007428	COG0546	phosphoglycolate phosphatase activity
AGRA3207_007432	COG2963	transposase activity
AGRA3207_007438	COG0667	Aldo Keto reductase
AGRA3207_007448	COG3293	Transposase
AGRA3207_007472	COG2801	Transposase and inactivated derivatives
AGRA3207_007490	COG0629	single-stranded DNA binding
AGRA3207_007536	COG4974	Belongs to the 'phage' integrase family
AGRA3207_007568	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AGRA3207_007569	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_007571	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AGRA3207_007573	COG1802	Transcriptional regulator
AGRA3207_007574	COG1024	Enoyl-CoA hydratase
AGRA3207_007575	COG0667	Aldo Keto reductase
AGRA3207_007577	COG0702	epimerase
AGRA3207_007578	COG1643	Atp-dependent helicase
AGRA3207_007584	COG1119	ATPase activity
AGRA3207_007593	COG2050	protein possibly involved in aromatic compounds catabolism
AGRA3207_007597	COG1131	(ABC) transporter
AGRA3207_007598	COG4585	Histidine kinase
AGRA3207_007599	COG2197	response regulator
AGRA3207_007627	COG0701	Predicted permease
AGRA3207_007631	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_007632	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGRA3207_007640	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AGRA3207_007645	COG0494	nUDIX hydrolase
AGRA3207_007648	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AGRA3207_007651	COG2205	protein histidine kinase activity
AGRA3207_007651	COG0784	Response regulator, receiver
AGRA3207_007655	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AGRA3207_007657	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AGRA3207_007666	COG0640	Transcriptional regulator
AGRA3207_007671	COG1316	TRANSCRIPTIONal
AGRA3207_007674	COG1522	sequence-specific DNA binding
AGRA3207_007688	COG0583	DNA-binding transcription factor activity
AGRA3207_007690	COG1376	ErfK ybiS ycfS ynhG family protein
AGRA3207_007691	COG1376	ErfK ybiS ycfS ynhG family protein
AGRA3207_007692	COG0438	transferase activity, transferring glycosyl groups
AGRA3207_007695	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGRA3207_007701	COG2205	protein histidine kinase activity
AGRA3207_007702	COG0745	RESPONSE REGULATOR receiver
AGRA3207_007703	COG0577	efflux transmembrane transporter activity
AGRA3207_007703	COG1136	(ABC) transporter
AGRA3207_007704	COG0577	efflux transmembrane transporter activity
AGRA3207_007705	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AGRA3207_007707	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_007708	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGRA3207_007709	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AGRA3207_007712	COG1028	Short-chain dehydrogenase reductase Sdr
AGRA3207_007714	COG0667	Aldo Keto reductase
AGRA3207_007715	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AGRA3207_007716	COG0657	acetylesterase activity
AGRA3207_007721	COG1063	alcohol dehydrogenase
AGRA3207_007723	COG3559	Exporter of polyketide antibiotics
AGRA3207_007724	COG1131	(ABC) transporter
AGRA3207_007726	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGRA3207_007727	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGRA3207_007728	COG1120	ATPase activity
AGRA3207_007730	COG0477	Major facilitator Superfamily
AGRA3207_007731	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
AGRA3207_007732	COG1021	2,3-dihydroxybenzoate-AMP ligase
AGRA3207_007733	COG2197	response regulator
AGRA3207_007735	COG3629	intracellular signal transduction
AGRA3207_007738	COG0604	alcohol dehydrogenase
AGRA3207_007738	COG3321	synthase
AGRA3207_007739	COG0604	alcohol dehydrogenase
AGRA3207_007739	COG3321	synthase
AGRA3207_007740	COG0604	alcohol dehydrogenase
AGRA3207_007740	COG3321	synthase
AGRA3207_007764	COG1309	transcriptional regulator
AGRA3207_007765	COG1131	(ABC) transporter
AGRA3207_007766	COG3559	Exporter of polyketide antibiotics
AGRA3207_007767	COG2124	cytochrome p450
AGRA3207_007770	COG1169	isochorismate synthase
AGRA3207_007772	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AGRA3207_007773	COG3486	L-lysine 6-monooxygenase (NADPH) activity
AGRA3207_007777	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AGRA3207_007778	COG3835	regulator
AGRA3207_007786	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AGRA3207_007796	COG0673	inositol 2-dehydrogenase activity
AGRA3207_007805	COG1012	belongs to the aldehyde dehydrogenase family
AGRA3207_007811	COG1131	(ABC) transporter
AGRA3207_007814	COG0308	aminopeptidase N
AGRA3207_007817	COG0463	Glycosyl transferase, family 2
AGRA3207_007818	COG1960	acyl-CoA dehydrogenase activity
AGRA3207_007820	COG1595	DNA-templated transcription, initiation
AGRA3207_007830	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AGRA3207_007831	COG2378	regulation of single-species biofilm formation
AGRA3207_007832	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AGRA3207_007836	COG1595	DNA-templated transcription, initiation
AGRA3207_007842	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AGRA3207_007843	COG0657	acetylesterase activity
AGRA3207_007845	COG0477	Major facilitator Superfamily
AGRA3207_007850	COG2234	aminopeptidase activity
AGRA3207_007856	COG4974	Belongs to the 'phage' integrase family
AGRA3207_007871	COG1674	ftsk spoiiie