locus-tag class description M3I41_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M3I41_00010 PF02767 DNA polymerase III beta subunit, central domain M3I41_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M3I41_00015 PF02463 RecF/RecN/SMC N terminal domain M3I41_00025 PF00204 DNA gyrase B M3I41_00025 PF00986 DNA gyrase B subunit, carboxyl terminus M3I41_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_00025 PF01751 Toprim domain M3I41_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller M3I41_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A M3I41_00055 PF00293 NUDIX domain M3I41_00060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M3I41_00070 PF03591 AzlC protein M3I41_00080 PF06781 Cell division protein CrgA M3I41_00085 PF04203 Sortase domain M3I41_00095 PF03793 PASTA domain M3I41_00095 PF00069 Protein kinase domain M3I41_00100 PF00069 Protein kinase domain M3I41_00105 PF00905 Penicillin binding protein transpeptidase domain M3I41_00110 PF01098 Cell cycle protein M3I41_00120 PF16697 Inner membrane component of T3SS, cytoplasmic domain M3I41_00125 PF12401 Protein of unknown function (DUF2662) M3I41_00125 PF00498 FHA domain M3I41_00140 PF06826 Predicted Permease Membrane Region M3I41_00140 PF02080 TrkA-C domain M3I41_00145 PF01594 AI-2E family transporter M3I41_00155 PF02664 S-Ribosylhomocysteinase (LuxS) M3I41_00160 PF01048 Phosphorylase superfamily M3I41_00175 PF07690 Major Facilitator Superfamily M3I41_00180 PF00754 F5/8 type C domain M3I41_00180 PF02973 Sialidase, N-terminal domain M3I41_00180 PF13088 BNR repeat-like domain M3I41_00230 PF00012 Hsp70 protein M3I41_00300 PF00005 ABC transporter M3I41_00320 PF00155 Aminotransferase class I and II M3I41_00325 PF08240 Alcohol dehydrogenase GroES-like domain M3I41_00325 PF00107 Zinc-binding dehydrogenase M3I41_00330 PF00664 ABC transporter transmembrane region M3I41_00330 PF00005 ABC transporter M3I41_00330 PF03412 Peptidase C39 family M3I41_00335 PF00664 ABC transporter transmembrane region M3I41_00335 PF00005 ABC transporter M3I41_00370 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M3I41_00375 PF07969 Amidohydrolase family M3I41_00390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3I41_00390 PF02403 Seryl-tRNA synthetase N-terminal domain M3I41_00395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3I41_00395 PF03466 LysR substrate binding domain M3I41_00415 PF00535 Glycosyl transferase family 2 M3I41_00425 PF03358 NADPH-dependent FMN reductase M3I41_00430 PF01042 Endoribonuclease L-PSP M3I41_00435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3I41_00435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3I41_00435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3I41_00435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3I41_00460 PF13088 BNR repeat-like domain M3I41_00460 PF00754 F5/8 type C domain M3I41_00460 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M3I41_00465 PF00206 Lyase M3I41_00465 PF08328 Adenylosuccinate lyase C-terminal M3I41_00475 PF00403 Heavy-metal-associated domain M3I41_00490 PF00860 Permease family M3I41_00505 PF00027 Cyclic nucleotide-binding domain M3I41_00505 PF13545 Crp-like helix-turn-helix domain M3I41_00515 PF02467 Transcription factor WhiB M3I41_00520 PF00912 Transglycosylase M3I41_00520 PF00905 Penicillin binding protein transpeptidase domain M3I41_00535 PF00117 Glutamine amidotransferase class-I M3I41_00535 PF00958 GMP synthase C terminal domain M3I41_00535 PF02540 NAD synthase M3I41_00540 PF04107 Glutamate-cysteine ligase family 2(GCS2) M3I41_00570 PF00437 Type II/IV secretion system protein M3I41_00600 PF04226 Transglycosylase associated protein M3I41_00615 PF00012 Hsp70 protein M3I41_00620 PF01025 GrpE M3I41_00625 PF00684 DnaJ central domain M3I41_00625 PF01556 DnaJ C terminal domain M3I41_00625 PF00226 DnaJ domain M3I41_00630 PF13411 MerR HTH family regulatory protein M3I41_00655 PF02754 Cysteine-rich domain M3I41_00655 PF13183 4Fe-4S dicluster domain M3I41_00655 PF02665 Nitrate reductase gamma subunit M3I41_00665 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_00670 PF00005 ABC transporter M3I41_00670 PF08402 TOBE domain M3I41_00690 PF02687 FtsX-like permease family M3I41_00690 PF00005 ABC transporter M3I41_00690 PF12704 MacB-like periplasmic core domain M3I41_00700 PF00962 Adenosine/AMP deaminase M3I41_00705 PF01734 Patatin-like phospholipase M3I41_00710 PF01053 Cys/Met metabolism PLP-dependent enzyme M3I41_00715 PF01061 ABC-2 type transporter M3I41_00720 PF01061 ABC-2 type transporter M3I41_00730 PF05661 Protein of unknown function (DUF808) M3I41_00735 PF00202 Aminotransferase class-III M3I41_00740 PF00490 Delta-aminolevulinic acid dehydratase M3I41_00750 PF03900 Porphobilinogen deaminase, C-terminal domain M3I41_00750 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M3I41_00755 PF01593 Flavin containing amine oxidoreductase M3I41_00760 PF01208 Uroporphyrinogen decarboxylase (URO-D) M3I41_00765 PF01488 Shikimate / quinate 5-dehydrogenase M3I41_00765 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M3I41_00765 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M3I41_00770 PF00762 Ferrochelatase M3I41_00775 PF06778 Chlorite dismutase M3I41_00775 PF00762 Ferrochelatase M3I41_00810 PF07685 CobB/CobQ-like glutamine amidotransferase domain M3I41_00815 PF08245 Mur ligase middle domain M3I41_00815 PF08353 Domain of unknown function (DUF1727) M3I41_00825 PF17871 AAA lid domain M3I41_00825 PF07724 AAA domain (Cdc48 subfamily) M3I41_00825 PF10431 C-terminal, D2-small domain, of ClpB protein M3I41_00825 PF02861 Clp amino terminal domain, pathogenicity island component M3I41_00825 PF00004 ATPase family associated with various cellular activities (AAA) M3I41_00830 PF18080 Galactose mutarotase-like fold domain M3I41_00830 PF08305 NPCBM/NEW2 domain M3I41_00830 PF17974 Galactose-binding domain-like M3I41_00830 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M3I41_00830 PF12905 Endo-alpha-N-acetylgalactosaminidase M3I41_00830 PF17451 Glycosyl hydrolase 101 beta sandwich domain M3I41_00840 PF01297 Zinc-uptake complex component A periplasmic M3I41_00845 PF00005 ABC transporter M3I41_00850 PF00950 ABC 3 transport family M3I41_00855 PF13396 Phospholipase_D-nuclease N-terminal M3I41_00855 PF13091 PLD-like domain M3I41_00870 PF00270 DEAD/DEAH box helicase M3I41_00870 PF11898 Domain of unknown function (DUF3418) M3I41_00870 PF04408 Helicase associated domain (HA2) M3I41_00870 PF00271 Helicase conserved C-terminal domain M3I41_00870 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M3I41_00885 PF12704 MacB-like periplasmic core domain M3I41_00885 PF02687 FtsX-like permease family M3I41_00885 PF00005 ABC transporter M3I41_00895 PF03458 UPF0126 domain M3I41_00900 PF00005 ABC transporter M3I41_00915 PF00005 ABC transporter M3I41_00925 PF00005 ABC transporter M3I41_00935 PF00664 ABC transporter transmembrane region M3I41_00935 PF00005 ABC transporter M3I41_00960 PF00692 dUTPase M3I41_00970 PF00929 Exonuclease M3I41_00970 PF02811 PHP domain M3I41_00970 PF07733 Bacterial DNA polymerase III alpha NTPase domain M3I41_00970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M3I41_00970 PF14579 Helix-hairpin-helix motif M3I41_00975 PF00144 Beta-lactamase M3I41_00990 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_00995 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_01005 PF08534 Redoxin M3I41_01010 PF00156 Phosphoribosyl transferase domain M3I41_01020 PF00588 SpoU rRNA Methylase family M3I41_01020 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3I41_01025 PF01116 Fructose-bisphosphate aldolase class-II M3I41_01030 PF01156 Inosine-uridine preferring nucleoside hydrolase M3I41_01035 PF07690 Major Facilitator Superfamily M3I41_01040 PF00294 pfkB family carbohydrate kinase M3I41_01045 PF00709 Adenylosuccinate synthetase M3I41_01090 PF00027 Cyclic nucleotide-binding domain M3I41_01090 PF00520 Ion transport protein M3I41_01150 PF03239 Iron permease FTR1 family M3I41_01155 PF13473 Cupredoxin-like domain M3I41_01155 PF09375 Imelysin M3I41_01160 PF04261 Dyp-type peroxidase family M3I41_01160 PF10518 TAT (twin-arginine translocation) pathway signal sequence M3I41_01165 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M3I41_01165 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M3I41_01175 PF13333 Integrase core domain M3I41_01175 PF00665 Integrase core domain M3I41_01175 PF13276 HTH-like domain M3I41_01180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M3I41_01180 PF02843 Phosphoribosylglycinamide synthetase, C domain M3I41_01180 PF02844 Phosphoribosylglycinamide synthetase, N domain M3I41_01185 PF01259 SAICAR synthetase M3I41_01190 PF00754 F5/8 type C domain M3I41_01190 PF00963 Cohesin domain M3I41_01190 PF07555 beta-N-acetylglucosaminidase M3I41_01190 PF00041 Fibronectin type III domain M3I41_01190 PF02838 Glycosyl hydrolase family 20, domain 2 M3I41_01205 PF00534 Glycosyl transferases group 1 M3I41_01210 PF00586 AIR synthase related protein, N-terminal domain M3I41_01210 PF02769 AIR synthase related protein, C-terminal domain M3I41_01210 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M3I41_01220 PF07664 Ferrous iron transport protein B C terminus M3I41_01220 PF02421 Ferrous iron transport protein B M3I41_01220 PF17910 FeoB cytosolic helical domain M3I41_01220 PF07670 Nucleoside recognition M3I41_01230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M3I41_01230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M3I41_01240 PF00156 Phosphoribosyl transferase domain M3I41_01245 PF02769 AIR synthase related protein, C-terminal domain M3I41_01245 PF00586 AIR synthase related protein, N-terminal domain M3I41_01290 PF01641 SelR domain M3I41_01300 PF17827 PrmC N-terminal domain M3I41_01300 PF05175 Methyltransferase small domain M3I41_01310 PF13368 Topoisomerase C-terminal repeat M3I41_01310 PF01131 DNA topoisomerase M3I41_01310 PF01751 Toprim domain M3I41_01315 PF02223 Thymidylate kinase M3I41_01320 PF12169 DNA polymerase III subunits gamma and tau domain III M3I41_01325 PF07690 Major Facilitator Superfamily M3I41_01330 PF00459 Inositol monophosphatase family M3I41_01375 PF13090 Polyphosphate kinase C-terminal domain 2 M3I41_01375 PF13089 Polyphosphate kinase N-terminal domain M3I41_01375 PF02503 Polyphosphate kinase middle domain M3I41_01375 PF17941 Polyphosphate kinase C-terminal domain 1 M3I41_01380 PF00293 NUDIX domain M3I41_01380 PF00300 Histidine phosphatase superfamily (branch 1) M3I41_01395 PF02127 Aminopeptidase I zinc metalloprotease (M18) M3I41_01400 PF00596 Class II Aldolase and Adducin N-terminal domain M3I41_01405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M3I41_01405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M3I41_01410 PF00465 Iron-containing alcohol dehydrogenase M3I41_01415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M3I41_01415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M3I41_01420 PF02080 TrkA-C domain M3I41_01420 PF02254 TrkA-N domain M3I41_01425 PF02386 Cation transport protein M3I41_01430 PF12728 Helix-turn-helix domain M3I41_01445 PF00300 Histidine phosphatase superfamily (branch 1) M3I41_01460 PF00501 AMP-binding enzyme M3I41_01460 PF13193 AMP-binding enzyme C-terminal domain M3I41_01465 PF01717 Cobalamin-independent synthase, Catalytic domain M3I41_01465 PF08267 Cobalamin-independent synthase, N-terminal domain M3I41_01470 PF02219 Methylenetetrahydrofolate reductase M3I41_01490 PF07726 ATPase family associated with various cellular activities (AAA) M3I41_01490 PF17863 AAA lid domain M3I41_01530 PF00069 Protein kinase domain M3I41_01530 PF13191 AAA ATPase domain M3I41_01540 PF12538 DNA transporter M3I41_01540 PF01580 FtsK/SpoIIIE family M3I41_01585 PF01497 Periplasmic binding protein M3I41_01590 PF01032 FecCD transport family M3I41_01595 PF01032 FecCD transport family M3I41_01600 PF00005 ABC transporter M3I41_01610 PF02652 L-lactate permease M3I41_01615 PF01266 FAD dependent oxidoreductase M3I41_01615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M3I41_01620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M3I41_01620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M3I41_01625 PF04198 Putative sugar-binding domain M3I41_01640 PF18073 Rubredoxin metal binding domain M3I41_01645 PF01497 Periplasmic binding protein M3I41_01650 PF01032 FecCD transport family M3I41_01655 PF01032 FecCD transport family M3I41_01660 PF00005 ABC transporter M3I41_01670 PF02502 Ribose/Galactose Isomerase M3I41_01680 PF18407 GCN5-related N-acetyltransferase like domain M3I41_01680 PF13344 Haloacid dehalogenase-like hydrolase M3I41_01685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M3I41_01685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M3I41_01690 PF02779 Transketolase, pyrimidine binding domain M3I41_01690 PF02780 Transketolase, C-terminal domain M3I41_01690 PF00456 Transketolase, thiamine diphosphate binding domain M3I41_01695 PF00012 Hsp70 protein M3I41_01700 PF01040 UbiA prenyltransferase family M3I41_01705 PF00378 Enoyl-CoA hydratase/isomerase M3I41_01715 PF13378 Enolase C-terminal domain-like M3I41_01715 PF18374 Enolase N-terminal domain-like M3I41_01720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3I41_01720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3I41_01725 PF13180 PDZ domain M3I41_01730 PF00425 chorismate binding enzyme M3I41_01735 PF01209 ubiE/COQ5 methyltransferase family M3I41_01740 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M3I41_01745 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M3I41_01750 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M3I41_01755 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M3I41_01765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M3I41_01765 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M3I41_01765 PF10531 SLBB domain M3I41_01770 PF00384 Molybdopterin oxidoreductase M3I41_01770 PF01568 Molydopterin dinucleotide binding domain M3I41_01770 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M3I41_01775 PF00146 NADH dehydrogenase M3I41_01780 PF12838 4Fe-4S dicluster domain M3I41_01785 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M3I41_01790 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M3I41_01795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M3I41_01795 PF00361 Proton-conducting membrane transporter M3I41_01800 PF00361 Proton-conducting membrane transporter M3I41_01805 PF00361 Proton-conducting membrane transporter M3I41_01810 PF00348 Polyprenyl synthetase M3I41_01815 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3I41_01820 PF02646 RmuC family M3I41_01830 PF06071 Protein of unknown function (DUF933) M3I41_01830 PF01926 50S ribosome-binding GTPase M3I41_01835 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB M3I41_01840 PF01381 Helix-turn-helix M3I41_01850 PF09957 Bacterial antitoxin of type II TA system, VapB M3I41_01855 PF01850 PIN domain M3I41_01915 PF03747 ADP-ribosylglycohydrolase M3I41_01940 PF13411 MerR HTH family regulatory protein M3I41_01940 PF00145 C-5 cytosine-specific DNA methylase M3I41_01950 PF00392 Bacterial regulatory proteins, gntR family M3I41_01955 PF00005 ABC transporter M3I41_01975 PF01906 Putative heavy-metal-binding M3I41_02005 PF03459 TOBE domain M3I41_02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3I41_02010 PF08240 Alcohol dehydrogenase GroES-like domain M3I41_02010 PF00107 Zinc-binding dehydrogenase M3I41_02030 PF00128 Alpha amylase, catalytic domain M3I41_02030 PF09154 Domain of unknown function (DUF1939) M3I41_02035 PF00561 alpha/beta hydrolase fold M3I41_02135 PF00120 Glutamine synthetase, catalytic domain M3I41_02135 PF03951 Glutamine synthetase, beta-Grasp domain M3I41_02140 PF00324 Amino acid permease M3I41_02155 PF01625 Peptide methionine sulfoxide reductase M3I41_02160 PF01272 Transcription elongation factor, GreA/GreB, C-term M3I41_02160 PF03449 Transcription elongation factor, N-terminal M3I41_02165 PF03006 Haemolysin-III related M3I41_02170 PF01255 Putative undecaprenyl diphosphate synthase M3I41_02180 PF00294 pfkB family carbohydrate kinase M3I41_02185 PF02609 Exonuclease VII small subunit M3I41_02190 PF13742 OB-fold nucleic acid binding domain M3I41_02190 PF02601 Exonuclease VII, large subunit M3I41_02195 PF02401 LytB protein M3I41_02200 PF01435 Peptidase family M48 M3I41_02205 PF04461 Protein of unknown function (DUF520) M3I41_02225 PF00471 Ribosomal protein L33 M3I41_02235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M3I41_02235 PF01565 FAD binding domain M3I41_02250 PF00155 Aminotransferase class I and II M3I41_02260 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M3I41_02265 PF02357 Transcription termination factor nusG M3I41_02270 PF00298 Ribosomal protein L11, RNA binding domain M3I41_02270 PF03946 Ribosomal protein L11, N-terminal domain M3I41_02275 PF00687 Ribosomal protein L1p/L10e family M3I41_02285 PF00466 Ribosomal protein L10 M3I41_02290 PF16320 Ribosomal protein L7/L12 dimerisation domain M3I41_02290 PF00542 Ribosomal protein L7/L12 C-terminal domain M3I41_02320 PF04561 RNA polymerase Rpb2, domain 2 M3I41_02320 PF04565 RNA polymerase Rpb2, domain 3 M3I41_02320 PF04560 RNA polymerase Rpb2, domain 7 M3I41_02320 PF00562 RNA polymerase Rpb2, domain 6 M3I41_02320 PF10385 RNA polymerase beta subunit external 1 domain M3I41_02320 PF04563 RNA polymerase beta subunit M3I41_02325 PF05000 RNA polymerase Rpb1, domain 4 M3I41_02325 PF04997 RNA polymerase Rpb1, domain 1 M3I41_02325 PF04998 RNA polymerase Rpb1, domain 5 M3I41_02325 PF04983 RNA polymerase Rpb1, domain 3 M3I41_02325 PF00623 RNA polymerase Rpb1, domain 2 M3I41_02345 PF00296 Luciferase-like monooxygenase M3I41_02350 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_02355 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_02355 PF12911 N-terminal TM domain of oligopeptide transport permease C M3I41_02360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3I41_02360 PF00005 ABC transporter M3I41_02365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3I41_02380 PF03144 Elongation factor Tu domain 2 M3I41_02380 PF00009 Elongation factor Tu GTP binding domain M3I41_02380 PF14492 Elongation Factor G, domain II M3I41_02380 PF00679 Elongation factor G C-terminus M3I41_02385 PF00037 4Fe-4S binding domain M3I41_02395 PF02545 Maf-like protein M3I41_02405 PF16701 Adenylate cyclase regulatory domain M3I41_02405 PF00211 Adenylate and Guanylate cyclase catalytic domain M3I41_02410 PF09335 SNARE associated Golgi protein M3I41_02430 PF02222 ATP-grasp domain M3I41_02430 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M3I41_02435 PF00731 AIR carboxylase M3I41_02440 PF01370 NAD dependent epimerase/dehydratase family M3I41_02445 PF03816 Cell envelope-related transcriptional attenuator domain M3I41_02450 PF03816 Cell envelope-related transcriptional attenuator domain M3I41_02470 PF00132 Bacterial transferase hexapeptide (six repeats) M3I41_02475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M3I41_02480 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M3I41_02500 PF00534 Glycosyl transferases group 1 M3I41_02500 PF13439 Glycosyltransferase Family 4 M3I41_02505 PF02350 UDP-N-acetylglucosamine 2-epimerase M3I41_02540 PF00005 ABC transporter M3I41_02540 PF00664 ABC transporter transmembrane region M3I41_02550 PF00534 Glycosyl transferases group 1 M3I41_02550 PF13439 Glycosyltransferase Family 4 M3I41_02555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M3I41_02555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M3I41_02555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M3I41_02565 PF16363 GDP-mannose 4,6 dehydratase M3I41_02570 PF01370 NAD dependent epimerase/dehydratase family M3I41_02575 PF05045 Rhamnan synthesis protein F M3I41_02585 PF00005 ABC transporter M3I41_02585 PF14524 Wzt C-terminal domain M3I41_02590 PF00535 Glycosyl transferase family 2 M3I41_02605 PF00534 Glycosyl transferases group 1 M3I41_02605 PF13477 Glycosyl transferase 4-like M3I41_02615 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M3I41_02625 PF00535 Glycosyl transferase family 2 M3I41_02645 PF04991 LicD family M3I41_02655 PF00892 EamA-like transporter family M3I41_02660 PF12804 MobA-like NTP transferase domain M3I41_02660 PF00132 Bacterial transferase hexapeptide (six repeats) M3I41_02665 PF00483 Nucleotidyl transferase M3I41_02670 PF01238 Phosphomannose isomerase type I M3I41_02685 PF02467 Transcription factor WhiB M3I41_02710 PF03641 Possible lysine decarboxylase M3I41_02725 PF01596 O-methyltransferase M3I41_02730 PF01883 Iron-sulfur cluster assembly protein M3I41_02730 PF10609 NUBPL iron-transfer P-loop NTPase M3I41_02740 PF00571 CBS domain M3I41_02740 PF03448 MgtE intracellular N domain M3I41_02740 PF01769 Divalent cation transporter M3I41_02745 PF05195 Aminopeptidase P, N-terminal domain M3I41_02745 PF00557 Metallopeptidase family M24 M3I41_02755 PF01914 MarC family integral membrane protein M3I41_02760 PF00270 DEAD/DEAH box helicase M3I41_02760 PF00271 Helicase conserved C-terminal domain M3I41_02780 PF00570 HRDC domain M3I41_02780 PF00580 UvrD/REP helicase N-terminal domain M3I41_02780 PF13361 UvrD-like helicase C-terminal domain M3I41_02795 PF00437 Type II/IV secretion system protein M3I41_02830 PF00005 ABC transporter M3I41_02850 PF03466 LysR substrate binding domain M3I41_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3I41_02855 PF02673 Bacitracin resistance protein BacA M3I41_02860 PF04055 Radical SAM superfamily M3I41_02860 PF06463 Molybdenum Cofactor Synthesis C M3I41_02875 PF07732 Multicopper oxidase M3I41_02885 PF03193 RsgA GTPase M3I41_02890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3I41_02900 PF08281 Sigma-70, region 4 M3I41_02900 PF04542 Sigma-70 region 2 M3I41_02915 PF16078 2-oxoglutarate dehydrogenase N-terminus M3I41_02915 PF00676 Dehydrogenase E1 component M3I41_02915 PF16870 2-oxoglutarate dehydrogenase C-terminal M3I41_02915 PF02779 Transketolase, pyrimidine binding domain M3I41_02915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3I41_02920 PF01595 Cyclin M transmembrane N-terminal domain M3I41_02920 PF00571 CBS domain M3I41_02920 PF03471 Transporter associated domain M3I41_02925 PF01595 Cyclin M transmembrane N-terminal domain M3I41_02925 PF00571 CBS domain M3I41_02930 PF01551 Peptidase family M23 M3I41_02930 PF10145 Phage-related minor tail protein M3I41_02930 PF01464 Transglycosylase SLT domain M3I41_02940 PF00156 Phosphoribosyl transferase domain M3I41_02955 PF08544 GHMP kinases C terminal M3I41_02955 PF00288 GHMP kinases N terminal domain M3I41_02955 PF10509 Galactokinase galactose-binding signature M3I41_02960 PF00483 Nucleotidyl transferase M3I41_02965 PF03358 NADPH-dependent FMN reductase M3I41_02965 PF01566 Natural resistance-associated macrophage protein M3I41_02970 PF03485 Arginyl tRNA synthetase N terminal domain M3I41_02970 PF00750 tRNA synthetases class I (R) M3I41_02970 PF05746 DALR anticodon binding domain M3I41_02975 PF01842 ACT domain M3I41_02975 PF00742 Homoserine dehydrogenase M3I41_02975 PF03447 Homoserine dehydrogenase, NAD binding domain M3I41_02980 PF00291 Pyridoxal-phosphate dependent enzyme M3I41_02985 PF00288 GHMP kinases N terminal domain M3I41_02990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3I41_02990 PF07497 Rho termination factor, RNA-binding domain M3I41_02990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3I41_02990 PF07498 Rho termination factor, N-terminal domain M3I41_02990 PF07497 Rho termination factor, RNA-binding domain M3I41_02990 PF07498 Rho termination factor, N-terminal domain M3I41_02995 PF01197 Ribosomal protein L31 M3I41_03000 PF00472 RF-1 domain M3I41_03000 PF03462 PCRF domain M3I41_03005 PF17827 PrmC N-terminal domain M3I41_03005 PF13649 Methyltransferase domain M3I41_03010 PF13361 UvrD-like helicase C-terminal domain M3I41_03010 PF00580 UvrD/REP helicase N-terminal domain M3I41_03015 PF00365 Phosphofructokinase M3I41_03020 PF08442 ATP-grasp domain M3I41_03020 PF00549 CoA-ligase M3I41_03025 PF02629 CoA binding domain M3I41_03025 PF00549 CoA-ligase M3I41_03030 PF00551 Formyl transferase M3I41_03035 PF02142 MGS-like domain M3I41_03035 PF01808 AICARFT/IMPCHase bienzyme M3I41_03050 PF00561 alpha/beta hydrolase fold M3I41_03055 PF00375 Sodium:dicarboxylate symporter family M3I41_03060 PF00005 ABC transporter M3I41_03060 PF00664 ABC transporter transmembrane region M3I41_03065 PF00005 ABC transporter M3I41_03065 PF00664 ABC transporter transmembrane region M3I41_03070 PF00056 lactate/malate dehydrogenase, NAD binding domain M3I41_03070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M3I41_03080 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_03085 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_03095 PF00392 Bacterial regulatory proteins, gntR family M3I41_03115 PF00085 Thioredoxin M3I41_03120 PF00343 Carbohydrate phosphorylase M3I41_03125 PF02806 Alpha amylase, C-terminal all-beta domain M3I41_03125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M3I41_03125 PF00128 Alpha amylase, catalytic domain M3I41_03130 PF01636 Phosphotransferase enzyme family M3I41_03130 PF18085 Maltokinase N-terminal cap domain M3I41_03135 PF00128 Alpha amylase, catalytic domain M3I41_03135 PF11896 Domain of unknown function (DUF3416) M3I41_03140 PF00830 Ribosomal L28 family M3I41_03145 PF13684 Dihydroxyacetone kinase family M3I41_03145 PF02734 DAK2 domain M3I41_03150 PF00270 DEAD/DEAH box helicase M3I41_03150 PF00271 Helicase conserved C-terminal domain M3I41_03150 PF17191 RecG wedge domain M3I41_03160 PF01467 Cytidylyltransferase-like M3I41_03175 PF00035 Double-stranded RNA binding motif M3I41_03175 PF14622 Ribonuclease-III-like M3I41_03180 PF06827 Zinc finger found in FPG and IleRS M3I41_03180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M3I41_03180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M3I41_03185 PF00072 Response regulator receiver domain M3I41_03185 PF00196 Bacterial regulatory proteins, luxR family M3I41_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_03190 PF07730 Histidine kinase M3I41_03190 PF13185 GAF domain M3I41_03195 PF00664 ABC transporter transmembrane region M3I41_03195 PF00005 ABC transporter M3I41_03200 PF00005 ABC transporter M3I41_03200 PF00664 ABC transporter transmembrane region M3I41_03205 PF02322 Cytochrome bd terminal oxidase subunit II M3I41_03210 PF01654 Cytochrome bd terminal oxidase subunit I M3I41_03215 PF10150 Ribonuclease E/G family M3I41_03220 PF00829 Ribosomal prokaryotic L21 protein M3I41_03225 PF01016 Ribosomal L27 protein M3I41_03230 PF09269 Domain of unknown function (DUF1967) M3I41_03230 PF01018 GTP1/OBG M3I41_03230 PF01926 50S ribosome-binding GTPase M3I41_03240 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain M3I41_03240 PF17386 Lacto-N-biose phosphorylase C-terminal domain M3I41_03240 PF17385 Lacto-N-biose phosphorylase central domain M3I41_03245 PF00455 DeoR C terminal sensor domain M3I41_03245 PF08220 DeoR-like helix-turn-helix domain M3I41_03250 PF01467 Cytidylyltransferase-like M3I41_03265 PF00300 Histidine phosphatase superfamily (branch 1) M3I41_03290 PF00571 CBS domain M3I41_03290 PF00005 ABC transporter M3I41_03295 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_03300 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_03315 PF00206 Lyase M3I41_03315 PF10415 Fumarase C C-terminus M3I41_03320 PF12848 ABC transporter M3I41_03320 PF00005 ABC transporter M3I41_03330 PF00391 PEP-utilising enzyme, mobile domain M3I41_03330 PF05524 PEP-utilising enzyme, N-terminal M3I41_03330 PF02896 PEP-utilising enzyme, TIM barrel domain M3I41_03335 PF02446 4-alpha-glucanotransferase M3I41_03345 PF00367 phosphotransferase system, EIIB M3I41_03350 PF02378 Phosphotransferase system, EIIC M3I41_03355 PF00367 phosphotransferase system, EIIB M3I41_03360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M3I41_03365 PF01433 Peptidase family M1 domain M3I41_03365 PF11838 ERAP1-like C-terminal domain M3I41_03370 PF01431 Peptidase family M13 M3I41_03370 PF05649 Peptidase family M13 M3I41_03375 PF02502 Ribose/Galactose Isomerase M3I41_03380 PF06827 Zinc finger found in FPG and IleRS M3I41_03380 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M3I41_03380 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M3I41_03385 PF00561 alpha/beta hydrolase fold M3I41_03390 PF00132 Bacterial transferase hexapeptide (six repeats) M3I41_03395 PF00291 Pyridoxal-phosphate dependent enzyme M3I41_03405 PF01205 Uncharacterized protein family UPF0029 M3I41_03405 PF09186 Domain of unknown function (DUF1949) M3I41_03410 PF01783 Ribosomal L32p protein family M3I41_03430 PF05697 Bacterial trigger factor protein (TF) M3I41_03430 PF05698 Bacterial trigger factor protein (TF) C-terminus M3I41_03430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3I41_03445 PF00574 Clp protease M3I41_03450 PF00574 Clp protease M3I41_03455 PF07724 AAA domain (Cdc48 subfamily) M3I41_03455 PF06689 ClpX C4-type zinc finger M3I41_03455 PF10431 C-terminal, D2-small domain, of ClpB protein M3I41_03465 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_03470 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_03480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M3I41_03480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M3I41_03485 PF00480 ROK family M3I41_03490 PF00005 ABC transporter M3I41_03505 PF03193 RsgA GTPase M3I41_03510 PF00501 AMP-binding enzyme M3I41_03515 PF00133 tRNA synthetases class I (I, L, M and V) M3I41_03515 PF08264 Anticodon-binding domain of tRNA M3I41_03525 PF02875 Mur ligase family, glutamate ligase domain M3I41_03525 PF08245 Mur ligase middle domain M3I41_03545 PF00334 Nucleoside diphosphate kinase M3I41_03550 PF00448 SRP54-type protein, GTPase domain M3I41_03550 PF02881 SRP54-type protein, helical bundle domain M3I41_03555 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M3I41_03555 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M3I41_03565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M3I41_03565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M3I41_03570 PF01925 Sulfite exporter TauE/SafE M3I41_03580 PF00248 Aldo/keto reductase family M3I41_03585 PF00209 Sodium:neurotransmitter symporter family M3I41_03610 PF01230 HIT domain M3I41_03620 PF00300 Histidine phosphatase superfamily (branch 1) M3I41_03630 PF00483 Nucleotidyl transferase M3I41_03635 PF00534 Glycosyl transferases group 1 M3I41_03635 PF13439 Glycosyltransferase Family 4 M3I41_03640 PF00005 ABC transporter M3I41_03650 PF01145 SPFH domain / Band 7 family M3I41_03655 PF00588 SpoU rRNA Methylase family M3I41_03665 PF00005 ABC transporter M3I41_03675 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M3I41_03675 PF02378 Phosphotransferase system, EIIC M3I41_03675 PF00367 phosphotransferase system, EIIB M3I41_03685 PF00005 ABC transporter M3I41_03685 PF12848 ABC transporter M3I41_03690 PF01521 Iron-sulphur cluster biosynthesis M3I41_03700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M3I41_03700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M3I41_03710 PF01541 GIY-YIG catalytic domain M3I41_03710 PF00929 Exonuclease M3I41_03720 PF00365 Phosphofructokinase M3I41_03725 PF01474 Class-II DAHP synthetase family M3I41_03730 PF03793 PASTA domain M3I41_03730 PF00069 Protein kinase domain M3I41_03735 PF00348 Polyprenyl synthetase M3I41_03745 PF04545 Sigma-70, region 4 M3I41_03745 PF04539 Sigma-70 region 3 M3I41_03745 PF04542 Sigma-70 region 2 M3I41_03745 PF00140 Sigma-70 factor, region 1.2 M3I41_03755 PF00204 DNA gyrase B M3I41_03755 PF01751 Toprim domain M3I41_03755 PF00986 DNA gyrase B subunit, carboxyl terminus M3I41_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_03760 PF00753 Metallo-beta-lactamase superfamily M3I41_03775 PF01432 Peptidase family M3 M3I41_03785 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3I41_03795 PF00248 Aldo/keto reductase family M3I41_03805 PF08704 tRNA methyltransferase complex GCD14 subunit M3I41_03810 PF16450 Proteasomal ATPase OB C-terminal domain M3I41_03810 PF00004 ATPase family associated with various cellular activities (AAA) M3I41_03810 PF17758 Proteasomal ATPase OB N-terminal domain M3I41_03815 PF03136 Pup-ligase protein M3I41_03820 PF05639 Pup-like protein M3I41_03825 PF03136 Pup-ligase protein M3I41_03840 PF00218 Indole-3-glycerol phosphate synthase M3I41_03845 PF01790 Prolipoprotein diacylglyceryl transferase M3I41_03850 PF00224 Pyruvate kinase, barrel domain M3I41_03850 PF02887 Pyruvate kinase, alpha/beta domain M3I41_03860 PF00072 Response regulator receiver domain M3I41_03860 PF03861 ANTAR domain M3I41_03870 PF01367 5'-3' exonuclease, C-terminal SAM fold M3I41_03870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M3I41_03870 PF00476 DNA polymerase family A M3I41_03875 PF00575 S1 RNA binding domain M3I41_03880 PF03553 Na+/H+ antiporter family M3I41_03880 PF13726 Na+-H+ antiporter family M3I41_03895 PF01914 MarC family integral membrane protein M3I41_03925 PF11208 Protein of unknown function (DUF2992) M3I41_03935 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system M3I41_03950 PF01867 CRISPR associated protein Cas1 M3I41_03955 PF09827 CRISPR associated protein Cas2 M3I41_03995 PF13683 Integrase core domain M3I41_03995 PF13276 HTH-like domain M3I41_04010 PF07859 alpha/beta hydrolase fold M3I41_04055 PF01470 Pyroglutamyl peptidase M3I41_04065 PF00271 Helicase conserved C-terminal domain M3I41_04065 PF02151 UvrB/uvrC motif M3I41_04065 PF12344 Ultra-violet resistance protein B M3I41_04065 PF17757 UvrB interaction domain M3I41_04065 PF04851 Type III restriction enzyme, res subunit M3I41_04070 PF03741 Integral membrane protein TerC family M3I41_04080 PF00356 Bacterial regulatory proteins, lacI family M3I41_04090 PF14785 Maltose transport system permease protein MalF P2 domain M3I41_04090 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_04095 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_04100 PF13593 SBF-like CPA transporter family (DUF4137) M3I41_04110 PF00005 ABC transporter M3I41_04110 PF17760 UvrA interaction domain M3I41_04110 PF17755 UvrA DNA-binding domain M3I41_04150 PF03129 Anticodon binding domain M3I41_04150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3I41_04150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3I41_04155 PF01230 HIT domain M3I41_04160 PF01066 CDP-alcohol phosphatidyltransferase M3I41_04165 PF03279 Bacterial lipid A biosynthesis acyltransferase M3I41_04170 PF13439 Glycosyltransferase Family 4 M3I41_04185 PF00293 NUDIX domain M3I41_04190 PF01709 Transcriptional regulator M3I41_04195 PF02075 Crossover junction endodeoxyribonuclease RuvC M3I41_04200 PF01330 RuvA N terminal domain M3I41_04200 PF07499 RuvA, C-terminal domain M3I41_04205 PF05496 Holliday junction DNA helicase RuvB P-loop domain M3I41_04205 PF05491 RuvB C-terminal winged helix domain M3I41_04205 PF17864 RuvB AAA lid domain M3I41_04215 PF02355 Protein export membrane protein M3I41_04215 PF07549 SecD/SecF GG Motif M3I41_04220 PF02355 Protein export membrane protein M3I41_04220 PF07549 SecD/SecF GG Motif M3I41_04225 PF00156 Phosphoribosyl transferase domain M3I41_04235 PF02824 TGS domain M3I41_04235 PF04607 Region found in RelA / SpoT proteins M3I41_04235 PF13291 ACT domain M3I41_04240 PF03993 Domain of Unknown Function (DUF349) M3I41_04245 PF00753 Metallo-beta-lactamase superfamily M3I41_04250 PF13393 Histidyl-tRNA synthetase M3I41_04250 PF03129 Anticodon binding domain M3I41_04260 PF00999 Sodium/hydrogen exchanger family M3I41_04275 PF13276 HTH-like domain M3I41_04275 PF00665 Integrase core domain M3I41_04275 PF13333 Integrase core domain M3I41_04280 PF00270 DEAD/DEAH box helicase M3I41_04280 PF00271 Helicase conserved C-terminal domain M3I41_04280 PF03880 DbpA RNA binding domain M3I41_04285 PF02938 GAD domain M3I41_04285 PF00152 tRNA synthetases class II (D, K and N) M3I41_04285 PF01336 OB-fold nucleic acid binding domain M3I41_04290 PF01300 Telomere recombination M3I41_04295 PF03176 MMPL family M3I41_04300 PF00004 ATPase family associated with various cellular activities (AAA) M3I41_04300 PF12002 MgsA AAA+ ATPase C terminal M3I41_04300 PF16193 AAA C-terminal domain M3I41_04305 PF01479 S4 domain M3I41_04305 PF00163 Ribosomal protein S4/S9 N-terminal domain M3I41_04310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3I41_04310 PF01411 tRNA synthetases class II (A) M3I41_04310 PF02272 DHHA1 domain M3I41_04315 PF03652 Holliday junction resolvase M3I41_04325 PF01488 Shikimate / quinate 5-dehydrogenase M3I41_04325 PF08501 Shikimate dehydrogenase substrate binding domain M3I41_04325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M3I41_04330 PF01264 Chorismate synthase M3I41_04335 PF01761 3-dehydroquinate synthase M3I41_04345 PF08207 Elongation factor P (EF-P) KOW-like domain M3I41_04345 PF01132 Elongation factor P (EF-P) OB domain M3I41_04345 PF09285 Elongation factor P, C-terminal M3I41_04350 PF01029 NusB family M3I41_04355 PF00156 Phosphoribosyl transferase domain M3I41_04360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3I41_04360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3I41_04365 PF01979 Amidohydrolase family M3I41_04370 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M3I41_04380 PF00625 Guanylate kinase M3I41_04385 PF01192 RNA polymerase Rpb6 M3I41_04390 PF04127 DNA / pantothenate metabolism flavoprotein M3I41_04390 PF02441 Flavoprotein M3I41_04395 PF02773 S-adenosylmethionine synthetase, C-terminal domain M3I41_04395 PF02772 S-adenosylmethionine synthetase, central domain M3I41_04395 PF00438 S-adenosylmethionine synthetase, N-terminal domain M3I41_04400 PF17764 3′ DNA-binding domain (3′BD) M3I41_04405 PF00551 Formyl transferase M3I41_04405 PF02911 Formyl transferase, C-terminal domain M3I41_04410 PF01189 16S rRNA methyltransferase RsmB/F M3I41_04410 PF01029 NusB family M3I41_04415 PF00834 Ribulose-phosphate 3 epimerase family M3I41_04420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3I41_04420 PF00364 Biotin-requiring enzyme M3I41_04420 PF02785 Biotin carboxylase C-terminal domain M3I41_04420 PF00289 Biotin carboxylase, N-terminal domain M3I41_04425 PF01039 Carboxyl transferase domain M3I41_04430 PF02801 Beta-ketoacyl synthase, C-terminal domain M3I41_04430 PF00109 Beta-ketoacyl synthase, N-terminal domain M3I41_04435 PF01648 4'-phosphopantetheinyl transferase superfamily M3I41_04440 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_04445 PF09084 NMT1/THI5 like M3I41_04470 PF02416 mttA/Hcf106 family M3I41_04475 PF00902 Sec-independent protein translocase protein (TatC) M3I41_04480 PF00781 Diacylglycerol kinase catalytic domain M3I41_04485 PF08148 DSHCT (NUC185) domain M3I41_04485 PF00271 Helicase conserved C-terminal domain M3I41_04485 PF00270 DEAD/DEAH box helicase M3I41_04490 PF00795 Carbon-nitrogen hydrolase M3I41_04495 PF00535 Glycosyl transferase family 2 M3I41_04500 PF13397 RNA polymerase-binding protein M3I41_04505 PF00365 Phosphofructokinase M3I41_04520 PF00356 Bacterial regulatory proteins, lacI family M3I41_04525 PF02378 Phosphotransferase system, EIIC M3I41_04525 PF00367 phosphotransferase system, EIIB M3I41_04525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M3I41_04530 PF00251 Glycosyl hydrolases family 32 N-terminal domain M3I41_04530 PF08244 Glycosyl hydrolases family 32 C terminal M3I41_04540 PF01384 Phosphate transporter family M3I41_04545 PF13411 MerR HTH family regulatory protein M3I41_04555 PF00498 FHA domain M3I41_04560 PF01066 CDP-alcohol phosphatidyltransferase M3I41_04565 PF11838 ERAP1-like C-terminal domain M3I41_04565 PF01433 Peptidase family M1 domain M3I41_04585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M3I41_04590 PF00271 Helicase conserved C-terminal domain M3I41_04590 PF04408 Helicase associated domain (HA2) M3I41_04590 PF00270 DEAD/DEAH box helicase M3I41_04590 PF08482 ATP-dependent helicase C-terminal M3I41_04595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3I41_04595 PF00205 Thiamine pyrophosphate enzyme, central domain M3I41_04595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3I41_04610 PF13493 Domain of unknown function (DUF4118) M3I41_04610 PF13426 PAS domain M3I41_04610 PF08447 PAS fold M3I41_04610 PF00989 PAS fold M3I41_04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_04610 PF00512 His Kinase A (phospho-acceptor) domain M3I41_04635 PF07690 Major Facilitator Superfamily M3I41_04670 PF01926 50S ribosome-binding GTPase M3I41_04670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M3I41_04680 PF01479 S4 domain M3I41_04680 PF00849 RNA pseudouridylate synthase M3I41_04685 PF13614 AAA domain M3I41_04690 PF02899 Phage integrase, N-terminal SAM-like domain M3I41_04690 PF00589 Phage integrase family M3I41_04695 PF03840 Preprotein translocase SecG subunit M3I41_04700 PF00121 Triosephosphate isomerase M3I41_04705 PF00162 Phosphoglycerate kinase M3I41_04710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M3I41_04710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3I41_04715 PF10298 WhiA N-terminal LAGLIDADG-like domain M3I41_04715 PF02650 WhiA C-terminal HTH domain M3I41_04715 PF14527 WhiA LAGLIDADG-like domain M3I41_04720 PF01933 Uncharacterised protein family UPF0052 M3I41_04725 PF03668 P-loop ATPase protein family M3I41_04730 PF08459 UvrC Helix-hairpin-helix N-terminal M3I41_04730 PF02151 UvrB/uvrC motif M3I41_04730 PF01541 GIY-YIG catalytic domain M3I41_04745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M3I41_04745 PF00128 Alpha amylase, catalytic domain M3I41_04760 PF04055 Radical SAM superfamily M3I41_04765 PF02901 Pyruvate formate lyase-like M3I41_04765 PF01228 Glycine radical M3I41_04770 PF02901 Pyruvate formate lyase-like M3I41_04770 PF01228 Glycine radical M3I41_04775 PF02780 Transketolase, C-terminal domain M3I41_04775 PF02779 Transketolase, pyrimidine binding domain M3I41_04775 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M3I41_04780 PF07859 alpha/beta hydrolase fold M3I41_04790 PF02789 Cytosol aminopeptidase family, N-terminal domain M3I41_04790 PF00883 Cytosol aminopeptidase family, catalytic domain M3I41_04795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3I41_04795 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3I41_04800 PF02817 e3 binding domain M3I41_04800 PF00364 Biotin-requiring enzyme M3I41_04800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3I41_04825 PF03099 Biotin/lipoate A/B protein ligase family M3I41_04830 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M3I41_04830 PF04055 Radical SAM superfamily M3I41_04840 PF00120 Glutamine synthetase, catalytic domain M3I41_04840 PF03951 Glutamine synthetase, beta-Grasp domain M3I41_04850 PF13086 AAA domain M3I41_04850 PF13195 Protein of unknown function (DUF4011) M3I41_04850 PF13086 AAA domain M3I41_04850 PF13087 AAA domain M3I41_04850 PF13195 Protein of unknown function (DUF4011) M3I41_04850 PF13087 AAA domain M3I41_04890 PF01263 Aldose 1-epimerase M3I41_04895 PF01594 AI-2E family transporter M3I41_04900 PF00877 NlpC/P60 family M3I41_04900 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain M3I41_04910 PF01569 PAP2 superfamily M3I41_04915 PF00106 short chain dehydrogenase M3I41_04920 PF01161 Phosphatidylethanolamine-binding protein M3I41_04925 PF00005 ABC transporter M3I41_04925 PF08402 TOBE domain M3I41_04930 PF16990 Carbohydrate binding module (family 35) M3I41_04930 PF03422 Carbohydrate binding module (family 6) M3I41_04930 PF13199 Glycosyl hydrolase family 66 M3I41_04935 PF00588 SpoU rRNA Methylase family M3I41_04990 PF05958 tRNA (Uracil-5-)-methyltransferase M3I41_04995 PF13520 Amino acid permease M3I41_05000 PF02254 TrkA-N domain M3I41_05000 PF02080 TrkA-C domain M3I41_05005 PF02080 TrkA-C domain M3I41_05005 PF02254 TrkA-N domain M3I41_05035 PF01676 Metalloenzyme superfamily M3I41_05040 PF03989 DNA gyrase C-terminal domain, beta-propeller M3I41_05040 PF00521 DNA gyrase/topoisomerase IV, subunit A M3I41_05045 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3I41_05050 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_05055 PF00005 ABC transporter M3I41_05065 PF08335 GlnD PII-uridylyltransferase M3I41_05065 PF03710 Glutamate-ammonia ligase adenylyltransferase M3I41_05070 PF08335 GlnD PII-uridylyltransferase M3I41_05070 PF03710 Glutamate-ammonia ligase adenylyltransferase M3I41_05075 PF00120 Glutamine synthetase, catalytic domain M3I41_05075 PF03951 Glutamine synthetase, beta-Grasp domain M3I41_05080 PF02548 Ketopantoate hydroxymethyltransferase M3I41_05085 PF00557 Metallopeptidase family M24 M3I41_05090 PF00480 ROK family M3I41_05100 PF01784 NIF3 (NGG1p interacting factor 3) M3I41_05115 PF03883 Peroxide stress protein YaaA M3I41_05125 PF00586 AIR synthase related protein, N-terminal domain M3I41_05125 PF02769 AIR synthase related protein, C-terminal domain M3I41_05130 PF07478 D-ala D-ala ligase C-terminus M3I41_05130 PF01820 D-ala D-ala ligase N-terminus M3I41_05135 PF01553 Acyltransferase M3I41_05140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3I41_05150 PF13439 Glycosyltransferase Family 4 M3I41_05150 PF00534 Glycosyl transferases group 1 M3I41_05155 PF03477 ATP cone domain M3I41_05165 PF01726 LexA DNA binding domain M3I41_05165 PF00717 Peptidase S24-like M3I41_05170 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M3I41_05170 PF00056 lactate/malate dehydrogenase, NAD binding domain M3I41_05175 PF13307 Helicase C-terminal domain M3I41_05180 PF01926 50S ribosome-binding GTPase M3I41_05180 PF16360 GTP-binding GTPase Middle Region M3I41_05180 PF13167 GTP-binding GTPase N-terminal M3I41_05185 PF08468 Methyltransferase small domain N-terminal M3I41_05185 PF05175 Methyltransferase small domain M3I41_05200 PF00654 Voltage gated chloride channel M3I41_05205 PF00919 Uncharacterized protein family UPF0004 M3I41_05205 PF04055 Radical SAM superfamily M3I41_05210 PF01268 Formate--tetrahydrofolate ligase M3I41_05215 PF02631 RecX family M3I41_05220 PF00154 recA bacterial DNA recombination protein M3I41_05235 PF00994 Probable molybdopterin binding domain M3I41_05235 PF18146 Damage-inducible protein CinA KH domain M3I41_05235 PF02464 Competence-damaged protein M3I41_05240 PF01066 CDP-alcohol phosphatidyltransferase M3I41_05245 PF01255 Putative undecaprenyl diphosphate synthase M3I41_05250 PF11967 Recombination protein O N terminal M3I41_05250 PF02565 Recombination protein O C terminal M3I41_05255 PF00682 HMGL-like M3I41_05255 PF08502 LeuA allosteric (dimerisation) domain M3I41_05260 PF01926 50S ribosome-binding GTPase M3I41_05260 PF07650 KH domain M3I41_05265 PF00571 CBS domain M3I41_05265 PF01595 Cyclin M transmembrane N-terminal domain M3I41_05265 PF03471 Transporter associated domain M3I41_05270 PF02130 Uncharacterized protein family UPF0054 M3I41_05275 PF02562 PhoH-like protein M3I41_05280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3I41_05285 PF04452 RNA methyltransferase M3I41_05290 PF01556 DnaJ C terminal domain M3I41_05290 PF00226 DnaJ domain M3I41_05290 PF00684 DnaJ central domain M3I41_05295 PF08220 DeoR-like helix-turn-helix domain M3I41_05295 PF01628 HrcA protein C terminal domain M3I41_05310 PF01168 Alanine racemase, N-terminal domain M3I41_05320 PF01063 Amino-transferase class IV M3I41_05325 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M3I41_05325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M3I41_05330 PF01842 ACT domain M3I41_05330 PF10369 Small subunit of acetolactate synthase M3I41_05335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3I41_05335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3I41_05335 PF00205 Thiamine pyrophosphate enzyme, central domain M3I41_05340 PF06826 Predicted Permease Membrane Region M3I41_05340 PF02080 TrkA-C domain M3I41_05355 PF07733 Bacterial DNA polymerase III alpha NTPase domain M3I41_05355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M3I41_05355 PF14579 Helix-hairpin-helix motif M3I41_05355 PF02811 PHP domain M3I41_05360 PF00849 RNA pseudouridylate synthase M3I41_05365 PF01252 Signal peptidase (SPase) II M3I41_05370 PF05103 DivIVA protein M3I41_05385 PF04472 Cell division protein SepF M3I41_05390 PF02578 Multi-copper polyphenol oxidoreductase laccase M3I41_05395 PF12327 FtsZ family, C-terminal domain M3I41_05395 PF00091 Tubulin/FtsZ family, GTPase domain M3I41_05405 PF01225 Mur ligase family, catalytic domain M3I41_05405 PF02875 Mur ligase family, glutamate ligase domain M3I41_05405 PF08245 Mur ligase middle domain M3I41_05410 PF04101 Glycosyltransferase family 28 C-terminal domain M3I41_05410 PF03033 Glycosyltransferase family 28 N-terminal domain M3I41_05415 PF01098 Cell cycle protein M3I41_05420 PF02875 Mur ligase family, glutamate ligase domain M3I41_05420 PF08245 Mur ligase middle domain M3I41_05425 PF00953 Glycosyl transferase family 4 M3I41_05425 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M3I41_05430 PF01225 Mur ligase family, catalytic domain M3I41_05430 PF02875 Mur ligase family, glutamate ligase domain M3I41_05430 PF08245 Mur ligase middle domain M3I41_05435 PF01225 Mur ligase family, catalytic domain M3I41_05435 PF02875 Mur ligase family, glutamate ligase domain M3I41_05435 PF08245 Mur ligase middle domain M3I41_05440 PF03717 Penicillin-binding Protein dimerisation domain M3I41_05440 PF00905 Penicillin binding protein transpeptidase domain M3I41_05450 PF01795 MraW methylase family M3I41_05455 PF02381 MraZ protein, putative antitoxin-like M3I41_05465 PF11799 impB/mucB/samB family C-terminal domain M3I41_05465 PF00817 impB/mucB/samB family M3I41_05490 PF13193 AMP-binding enzyme C-terminal domain M3I41_05490 PF00501 AMP-binding enzyme M3I41_05500 PF05193 Peptidase M16 inactive domain M3I41_05500 PF00675 Insulinase (Peptidase family M16) M3I41_05505 PF00005 ABC transporter M3I41_05520 PF00575 S1 RNA binding domain M3I41_05520 PF01138 3' exoribonuclease family, domain 1 M3I41_05520 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M3I41_05520 PF00013 KH domain M3I41_05525 PF00312 Ribosomal protein S15 M3I41_05535 PF01687 Riboflavin kinase M3I41_05535 PF06574 FAD synthetase M3I41_05545 PF16198 tRNA pseudouridylate synthase B C-terminal domain M3I41_05545 PF09142 tRNA Pseudouridine synthase II, C terminal M3I41_05545 PF01509 TruB family pseudouridylate synthase (N terminal domain) M3I41_05555 PF04760 Translation initiation factor IF-2, N-terminal region M3I41_05555 PF00009 Elongation factor Tu GTP binding domain M3I41_05555 PF00009 Elongation factor Tu GTP binding domain M3I41_05555 PF11987 Translation-initiation factor 2 M3I41_05555 PF04760 Translation initiation factor IF-2, N-terminal region M3I41_05555 PF11987 Translation-initiation factor 2 M3I41_05560 PF13184 NusA-like KH domain M3I41_05560 PF08529 NusA N-terminal domain M3I41_05565 PF02576 RimP N-terminal domain M3I41_05565 PF17384 RimP C-terminal SH3 domain M3I41_05575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3I41_05575 PF04073 Aminoacyl-tRNA editing domain M3I41_05575 PF03129 Anticodon binding domain M3I41_05585 PF04551 GcpE protein M3I41_05590 PF17820 PDZ domain M3I41_05590 PF02163 Peptidase family M50 M3I41_05595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M3I41_05595 PF13288 DXP reductoisomerase C-terminal domain M3I41_05595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M3I41_05605 PF04055 Radical SAM superfamily M3I41_05615 PF01765 Ribosome recycling factor M3I41_05620 PF00696 Amino acid kinase family M3I41_05625 PF00889 Elongation factor TS M3I41_05630 PF00318 Ribosomal protein S2 M3I41_05635 PF00324 Amino acid permease M3I41_05645 PF02899 Phage integrase, N-terminal SAM-like domain M3I41_05645 PF00589 Phage integrase family M3I41_05650 PF02481 DNA recombination-mediator protein A M3I41_05650 PF17782 DprA winged helix domain M3I41_05655 PF01078 Magnesium chelatase, subunit ChlI M3I41_05655 PF13335 Magnesium chelatase, subunit ChlI C-terminal M3I41_05660 PF02021 Uncharacterised protein family UPF0102 M3I41_05670 PF10611 Protein of unknown function (DUF2469) M3I41_05675 PF01351 Ribonuclease HII M3I41_05680 PF10502 Signal peptidase, peptidase S26 M3I41_05685 PF01245 Ribosomal protein L19 M3I41_05695 PF01782 RimM N-terminal domain M3I41_05705 PF00886 Ribosomal protein S16 M3I41_05710 PF00005 ABC transporter M3I41_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_05720 PF07730 Histidine kinase M3I41_05725 PF00072 Response regulator receiver domain M3I41_05725 PF00196 Bacterial regulatory proteins, luxR family M3I41_05730 PF01979 Amidohydrolase family M3I41_05735 PF02978 Signal peptide binding domain M3I41_05735 PF02881 SRP54-type protein, helical bundle domain M3I41_05735 PF00448 SRP54-type protein, GTPase domain M3I41_05740 PF08903 Domain of unknown function (DUF1846) M3I41_05750 PF04055 Radical SAM superfamily M3I41_05755 PF02390 Putative methyltransferase M3I41_05760 PF06421 GTP-binding protein LepA C-terminus M3I41_05760 PF00679 Elongation factor G C-terminus M3I41_05760 PF00009 Elongation factor Tu GTP binding domain M3I41_05770 PF01649 Ribosomal protein S20 M3I41_05785 PF10531 SLBB domain M3I41_05795 PF00210 Ferritin-like domain M3I41_05805 PF13603 Leucyl-tRNA synthetase, Domain 2 M3I41_05805 PF08264 Anticodon-binding domain of tRNA M3I41_05805 PF09334 tRNA synthetases class I (M) M3I41_05815 PF01207 Dihydrouridine synthase (Dus) M3I41_05825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3I41_05825 PF03129 Anticodon binding domain M3I41_05835 PF01297 Zinc-uptake complex component A periplasmic M3I41_05835 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M3I41_05840 PF00005 ABC transporter M3I41_05845 PF00950 ABC 3 transport family M3I41_05870 PF02463 RecF/RecN/SMC N terminal domain M3I41_05885 PF00005 ABC transporter M3I41_05890 PF08463 EcoEI R protein C-terminal M3I41_05890 PF00271 Helicase conserved C-terminal domain M3I41_05890 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) M3I41_05890 PF04851 Type III restriction enzyme, res subunit M3I41_05930 PF01527 Transposase M3I41_05960 PF04715 Anthranilate synthase component I, N terminal region M3I41_05960 PF00425 chorismate binding enzyme M3I41_05965 PF00117 Glutamine amidotransferase class-I M3I41_05970 PF02885 Glycosyl transferase family, helical bundle domain M3I41_05970 PF00591 Glycosyl transferase family, a/b domain M3I41_05975 PF00291 Pyridoxal-phosphate dependent enzyme M3I41_05980 PF00290 Tryptophan synthase alpha chain M3I41_05985 PF00977 Histidine biosynthesis protein M3I41_05990 PF17854 FtsK alpha domain M3I41_05990 PF09397 Ftsk gamma domain M3I41_05990 PF01580 FtsK/SpoIIIE family M3I41_05990 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M3I41_05995 PF00294 pfkB family carbohydrate kinase M3I41_06000 PF01336 OB-fold nucleic acid binding domain M3I41_06000 PF00152 tRNA synthetases class II (D, K and N) M3I41_06000 PF09924 Uncharacterised conserved protein (DUF2156) M3I41_06000 PF16995 Transmembrane region of lysyl-tRNA synthetase M3I41_06005 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M3I41_06005 PF12706 Beta-lactamase superfamily domain M3I41_06005 PF17770 Ribonuclease J C-terminal domain M3I41_06025 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3I41_06030 PF00155 Aminotransferase class I and II M3I41_06040 PF01235 Sodium:alanine symporter family M3I41_06045 PF01235 Sodium:alanine symporter family M3I41_06050 PF08148 DSHCT (NUC185) domain M3I41_06050 PF00271 Helicase conserved C-terminal domain M3I41_06050 PF00270 DEAD/DEAH box helicase M3I41_06055 PF04073 Aminoacyl-tRNA editing domain M3I41_06060 PF03733 Inner membrane component domain M3I41_06095 PF03725 3' exoribonuclease family, domain 2 M3I41_06095 PF01138 3' exoribonuclease family, domain 1 M3I41_06100 PF01725 Ham1 family M3I41_06105 PF12706 Beta-lactamase superfamily domain M3I41_06115 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M3I41_06115 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M3I41_06120 PF04851 Type III restriction enzyme, res subunit M3I41_06130 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M3I41_06140 PF13732 Domain of unknown function (DUF4162) M3I41_06140 PF00005 ABC transporter M3I41_06145 PF00216 Bacterial DNA-binding protein M3I41_06150 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M3I41_06155 PF00480 ROK family M3I41_06160 PF00701 Dihydrodipicolinate synthetase family M3I41_06165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3I41_06165 PF00005 ABC transporter M3I41_06170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3I41_06170 PF00005 ABC transporter M3I41_06175 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_06190 PF12833 Helix-turn-helix domain M3I41_06190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M3I41_06190 PF02805 Metal binding domain of Ada M3I41_06190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M3I41_06200 PF02384 N-6 DNA Methylase M3I41_06215 PF11867 Domain of unknown function (DUF3387) M3I41_06215 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M3I41_06215 PF18766 SWI2/SNF2 ATPase M3I41_06220 PF18766 SWI2/SNF2 ATPase M3I41_06220 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M3I41_06220 PF11867 Domain of unknown function (DUF3387) M3I41_06245 PF01668 SmpB protein M3I41_06250 PF08460 Bacterial SH3 domain M3I41_06250 PF01551 Peptidase family M23 M3I41_06255 PF18075 FtsX extracellular domain M3I41_06255 PF02687 FtsX-like permease family M3I41_06260 PF00005 ABC transporter M3I41_06270 PF00436 Single-strand binding protein family M3I41_06295 PF00929 Exonuclease M3I41_06300 PF03699 Uncharacterised protein family (UPF0182) M3I41_06315 PF13180 PDZ domain M3I41_06315 PF05362 Lon protease (S16) C-terminal proteolytic domain M3I41_06325 PF13361 UvrD-like helicase C-terminal domain M3I41_06325 PF00580 UvrD/REP helicase N-terminal domain M3I41_06325 PF00570 HRDC domain M3I41_06330 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M3I41_06330 PF09297 NADH pyrophosphatase zinc ribbon domain M3I41_06330 PF00293 NUDIX domain M3I41_06335 PF00266 Aminotransferase class-V M3I41_06355 PF01012 Electron transfer flavoprotein domain M3I41_06355 PF00766 Electron transfer flavoprotein FAD-binding domain M3I41_06360 PF01012 Electron transfer flavoprotein domain M3I41_06365 PF00128 Alpha amylase, catalytic domain M3I41_06365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M3I41_06370 PF00579 tRNA synthetases class I (W and Y) M3I41_06375 PF00561 alpha/beta hydrolase fold M3I41_06395 PF00456 Transketolase, thiamine diphosphate binding domain M3I41_06395 PF17831 Pyruvate dehydrogenase E1 component middle domain M3I41_06400 PF00206 Lyase M3I41_06400 PF10415 Fumarase C C-terminus M3I41_06405 PF13556 PucR C-terminal helix-turn-helix domain M3I41_06405 PF17853 GGDEF-like domain M3I41_06410 PF00550 Phosphopantetheine attachment site M3I41_06415 PF00109 Beta-ketoacyl synthase, N-terminal domain M3I41_06415 PF02801 Beta-ketoacyl synthase, C-terminal domain M3I41_06445 PF01327 Polypeptide deformylase M3I41_06450 PF13662 Toprim domain M3I41_06450 PF01807 CHC2 zinc finger M3I41_06450 PF10410 DnaB-helicase binding domain of primase M3I41_06450 PF08275 DNA primase catalytic core, N-terminal domain M3I41_06450 PF08278 DNA primase DnaG DnaB-binding M3I41_06455 PF01966 HD domain M3I41_06455 PF13286 Phosphohydrolase-associated domain M3I41_06465 PF07687 Peptidase dimerisation domain M3I41_06465 PF01546 Peptidase family M20/M25/M40 M3I41_06475 PF01180 Dihydroorotate dehydrogenase M3I41_06480 PF00999 Sodium/hydrogen exchanger family M3I41_06495 PF01883 Iron-sulfur cluster assembly protein M3I41_06500 PF01592 NifU-like N terminal domain M3I41_06505 PF00266 Aminotransferase class-V M3I41_06510 PF00005 ABC transporter M3I41_06515 PF01458 Uncharacterized protein family (UPF0051) M3I41_06520 PF01458 Uncharacterized protein family (UPF0051) M3I41_06535 PF00293 NUDIX domain M3I41_06540 PF06418 CTP synthase N-terminus M3I41_06540 PF00117 Glutamine amidotransferase class-I M3I41_06545 PF13579 Glycosyl transferase 4-like domain M3I41_06545 PF00534 Glycosyl transferases group 1 M3I41_06560 PF11382 Copper transport outer membrane protein, MctB M3I41_06570 PF02463 RecF/RecN/SMC N terminal domain M3I41_06575 PF01513 ATP-NAD kinase M3I41_06580 PF01728 FtsJ-like methyltransferase M3I41_06580 PF01479 S4 domain M3I41_06585 PF13344 Haloacid dehalogenase-like hydrolase M3I41_06610 PF00579 tRNA synthetases class I (W and Y) M3I41_06615 PF02863 Arginine repressor, C-terminal domain M3I41_06615 PF01316 Arginine repressor, DNA binding domain M3I41_06620 PF03484 tRNA synthetase B5 domain M3I41_06620 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M3I41_06620 PF01588 Putative tRNA binding domain M3I41_06620 PF03147 Ferredoxin-fold anticodon binding domain M3I41_06620 PF03483 B3/4 domain M3I41_06625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M3I41_06625 PF01409 tRNA synthetases class II core domain (F) M3I41_06630 PF00588 SpoU rRNA Methylase family M3I41_06630 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3I41_06635 PF00453 Ribosomal protein L20 M3I41_06640 PF01632 Ribosomal protein L35 M3I41_06645 PF05198 Translation initiation factor IF-3, N-terminal domain M3I41_06645 PF00707 Translation initiation factor IF-3, C-terminal domain M3I41_06655 PF00892 EamA-like transporter family M3I41_06670 PF01717 Cobalamin-independent synthase, Catalytic domain M3I41_06670 PF08267 Cobalamin-independent synthase, N-terminal domain M3I41_06690 PF03949 Malic enzyme, NAD binding domain M3I41_06690 PF00390 Malic enzyme, N-terminal domain M3I41_06695 PF02637 GatB domain M3I41_06695 PF02934 GatB/GatE catalytic domain M3I41_06700 PF01425 Amidase M3I41_06705 PF02686 Glu-tRNAGln amidotransferase C subunit M3I41_06715 PF00533 BRCA1 C Terminus (BRCT) domain M3I41_06715 PF12826 Helix-hairpin-helix motif M3I41_06715 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M3I41_06715 PF01653 NAD-dependent DNA ligase adenylation domain M3I41_06715 PF03120 NAD-dependent DNA ligase OB-fold domain M3I41_06720 PF01580 FtsK/SpoIIIE family M3I41_06720 PF12538 DNA transporter M3I41_06725 PF02467 Transcription factor WhiB M3I41_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_06730 PF12282 Signal transduction histidine kinase M3I41_06730 PF07568 Histidine kinase M3I41_06750 PF00303 Thymidylate synthase M3I41_06755 PF00186 Dihydrofolate reductase M3I41_06760 PF03462 PCRF domain M3I41_06760 PF00472 RF-1 domain M3I41_06765 PF12320 Type 5 capsule protein repressor C-terminal domain M3I41_06765 PF00149 Calcineurin-like phosphoesterase M3I41_06770 PF13476 AAA domain M3I41_06810 PF07516 SecA Wing and Scaffold domain M3I41_06810 PF07517 SecA DEAD-like domain M3I41_06810 PF01043 SecA preprotein cross-linking domain M3I41_06820 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M3I41_06820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M3I41_06825 PF10646 Sporulation and spore germination M3I41_06825 PF10647 Lipoprotein LpqB beta-propeller domain M3I41_06830 PF00672 HAMP domain M3I41_06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_06830 PF00512 His Kinase A (phospho-acceptor) domain M3I41_06835 PF00072 Response regulator receiver domain M3I41_06835 PF00486 Transcriptional regulatory protein, C terminal M3I41_06855 PF07726 ATPase family associated with various cellular activities (AAA) M3I41_06855 PF17863 AAA lid domain M3I41_06860 PF01882 Protein of unknown function DUF58 M3I41_06885 PF00483 Nucleotidyl transferase M3I41_06885 PF01050 Mannose-6-phosphate isomerase M3I41_06895 PF00696 Amino acid kinase family M3I41_06900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3I41_06900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3I41_06910 PF00455 DeoR C terminal sensor domain M3I41_06910 PF08220 DeoR-like helix-turn-helix domain M3I41_06915 PF10509 Galactokinase galactose-binding signature M3I41_06915 PF08544 GHMP kinases C terminal M3I41_06915 PF00288 GHMP kinases N terminal domain M3I41_06940 PF00005 ABC transporter M3I41_06940 PF02687 FtsX-like permease family M3I41_06940 PF12704 MacB-like periplasmic core domain M3I41_06945 PF02687 FtsX-like permease family M3I41_06945 PF12704 MacB-like periplasmic core domain M3I41_06945 PF00005 ABC transporter M3I41_06955 PF00708 Acylphosphatase M3I41_06965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M3I41_06965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M3I41_06970 PF00464 Serine hydroxymethyltransferase M3I41_06975 PF13419 Haloacid dehalogenase-like hydrolase M3I41_06980 PF01979 Amidohydrolase family M3I41_06985 PF01939 Endonuclease NucS M3I41_06995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M3I41_07000 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3I41_07000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3I41_07005 PF00231 ATP synthase M3I41_07010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3I41_07010 PF00306 ATP synthase alpha/beta chain, C terminal domain M3I41_07010 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3I41_07015 PF00213 ATP synthase delta (OSCP) subunit M3I41_07020 PF00430 ATP synthase B/B' CF(0) M3I41_07025 PF00137 ATP synthase subunit C M3I41_07030 PF00119 ATP synthase A chain M3I41_07045 PF01300 Telomere recombination M3I41_07055 PF00072 Response regulator receiver domain M3I41_07055 PF00196 Bacterial regulatory proteins, luxR family M3I41_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_07060 PF00512 His Kinase A (phospho-acceptor) domain M3I41_07060 PF00672 HAMP domain M3I41_07095 PF02661 Fic/DOC family M3I41_07095 PF12728 Helix-turn-helix domain M3I41_07100 PF00390 Malic enzyme, N-terminal domain M3I41_07100 PF03949 Malic enzyme, NAD binding domain M3I41_07105 PF03462 PCRF domain M3I41_07105 PF00472 RF-1 domain M3I41_07115 PF03167 Uracil DNA glycosylase superfamily M3I41_07125 PF00005 ABC transporter M3I41_07135 PF00440 Bacterial regulatory proteins, tetR family M3I41_07145 PF01661 Macro domain M3I41_07190 PF18543 Intracellular delivery domain M3I41_07190 PF02661 Fic/DOC family M3I41_07195 PF17755 UvrA DNA-binding domain M3I41_07195 PF17760 UvrA interaction domain M3I41_07195 PF00005 ABC transporter M3I41_07220 PF09957 Bacterial antitoxin of type II TA system, VapB M3I41_07225 PF01850 PIN domain M3I41_07245 PF00117 Glutamine amidotransferase class-I M3I41_07245 PF02540 NAD synthase M3I41_07245 PF00958 GMP synthase C terminal domain M3I41_07250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M3I41_07250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M3I41_07260 PF08240 Alcohol dehydrogenase GroES-like domain M3I41_07260 PF00107 Zinc-binding dehydrogenase M3I41_07275 PF00171 Aldehyde dehydrogenase family M3I41_07280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3I41_07280 PF00205 Thiamine pyrophosphate enzyme, central domain M3I41_07280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3I41_07285 PF04962 KduI/IolB family M3I41_07295 PF00294 pfkB family carbohydrate kinase M3I41_07300 PF07702 UTRA domain M3I41_07300 PF00392 Bacterial regulatory proteins, gntR family M3I41_07305 PF00923 Transaldolase/Fructose-6-phosphate aldolase M3I41_07310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M3I41_07310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M3I41_07320 PF00356 Bacterial regulatory proteins, lacI family M3I41_07325 PF00356 Bacterial regulatory proteins, lacI family M3I41_07325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M3I41_07330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M3I41_07330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M3I41_07335 PF00083 Sugar (and other) transporter M3I41_07340 PF01261 Xylose isomerase-like TIM barrel M3I41_07350 PF07085 DRTGG domain M3I41_07350 PF01515 Phosphate acetyl/butaryl transferase M3I41_07355 PF00871 Acetokinase family M3I41_07360 PF00075 RNase H M3I41_07365 PF00381 PTS HPr component phosphorylation site M3I41_07385 PF00571 CBS domain M3I41_07385 PF00478 IMP dehydrogenase / GMP reductase domain M3I41_07390 PF00166 Chaperonin 10 Kd subunit M3I41_07395 PF18096 THUMP domain-like M3I41_07405 PF00664 ABC transporter transmembrane region M3I41_07405 PF00005 ABC transporter M3I41_07410 PF00664 ABC transporter transmembrane region M3I41_07410 PF00005 ABC transporter M3I41_07415 PF00814 Glycoprotease family M3I41_07420 PF13183 4Fe-4S dicluster domain M3I41_07420 PF13085 2Fe-2S iron-sulfur cluster binding domain M3I41_07425 PF02910 Fumarate reductase flavoprotein C-term M3I41_07425 PF00890 FAD binding domain M3I41_07435 PF00583 Acetyltransferase (GNAT) family M3I41_07450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M3I41_07455 PF00842 Alanine racemase, C-terminal domain M3I41_07455 PF01168 Alanine racemase, N-terminal domain M3I41_07460 PF01256 Carbohydrate kinase M3I41_07460 PF03853 YjeF-related protein N-terminus M3I41_07465 PF01380 SIS domain M3I41_07470 PF00485 Phosphoribulokinase / Uridine kinase family M3I41_07475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3I41_07475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3I41_07475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3I41_07475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3I41_07480 PF00380 Ribosomal protein S9/S16 M3I41_07485 PF00572 Ribosomal protein L13 M3I41_07490 PF01416 tRNA pseudouridine synthase M3I41_07530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3I41_07530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3I41_07530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3I41_07530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3I41_07535 PF01196 Ribosomal protein L17 M3I41_07540 PF01000 RNA polymerase Rpb3/RpoA insert domain M3I41_07540 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M3I41_07540 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M3I41_07545 PF00411 Ribosomal protein S11 M3I41_07550 PF00416 Ribosomal protein S13/S18 M3I41_07555 PF00444 Ribosomal protein L36 M3I41_07560 PF01176 Translation initiation factor 1A / IF-1 M3I41_07565 PF00557 Metallopeptidase family M24 M3I41_07575 PF00344 SecY translocase M3I41_07580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M3I41_07585 PF00327 Ribosomal protein L30p/L7e M3I41_07590 PF00333 Ribosomal protein S5, N-terminal domain M3I41_07590 PF03719 Ribosomal protein S5, C-terminal domain M3I41_07595 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M3I41_07600 PF00347 Ribosomal protein L6 M3I41_07605 PF00410 Ribosomal protein S8 M3I41_07610 PF00253 Ribosomal protein S14p/S29e M3I41_07615 PF00281 Ribosomal protein L5 M3I41_07615 PF00673 ribosomal L5P family C-terminus M3I41_07620 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M3I41_07625 PF00238 Ribosomal protein L14p/L23e M3I41_07630 PF00366 Ribosomal protein S17 M3I41_07635 PF00831 Ribosomal L29 protein M3I41_07640 PF00252 Ribosomal protein L16p/L10e M3I41_07645 PF00189 Ribosomal protein S3, C-terminal domain M3I41_07645 PF07650 KH domain M3I41_07650 PF00237 Ribosomal protein L22p/L17e M3I41_07655 PF00203 Ribosomal protein S19 M3I41_07660 PF00181 Ribosomal Proteins L2, RNA binding domain M3I41_07660 PF03947 Ribosomal Proteins L2, C-terminal domain M3I41_07665 PF00276 Ribosomal protein L23 M3I41_07670 PF00573 Ribosomal protein L4/L1 family M3I41_07675 PF00297 Ribosomal protein L3 M3I41_07680 PF00338 Ribosomal protein S10p/S20e M3I41_07695 PF03143 Elongation factor Tu C-terminal domain M3I41_07695 PF00009 Elongation factor Tu GTP binding domain M3I41_07695 PF03144 Elongation factor Tu domain 2 M3I41_07700 PF03144 Elongation factor Tu domain 2 M3I41_07700 PF00679 Elongation factor G C-terminus M3I41_07700 PF14492 Elongation Factor G, domain II M3I41_07700 PF03764 Elongation factor G, domain IV M3I41_07700 PF00009 Elongation factor Tu GTP binding domain M3I41_07705 PF00177 Ribosomal protein S7p/S5e M3I41_07710 PF00164 Ribosomal protein S12/S23 M3I41_07715 PF00800 Prephenate dehydratase M3I41_07715 PF01842 ACT domain M3I41_07720 PF01336 OB-fold nucleic acid binding domain M3I41_07720 PF00152 tRNA synthetases class II (D, K and N) M3I41_07725 PF02261 Aspartate decarboxylase M3I41_07730 PF02569 Pantoate-beta-alanine ligase M3I41_07740 PF00005 ABC transporter M3I41_07740 PF02687 FtsX-like permease family M3I41_07740 PF12704 MacB-like periplasmic core domain M3I41_07745 PF00005 ABC transporter M3I41_07750 PF13936 Helix-turn-helix domain M3I41_07750 PF00665 Integrase core domain M3I41_07775 PF01022 Bacterial regulatory protein, arsR family M3I41_07785 PF02152 Dihydroneopterin aldolase M3I41_07790 PF00809 Pterin binding enzyme M3I41_07795 PF01227 GTP cyclohydrolase I M3I41_07800 PF17862 AAA+ lid domain M3I41_07800 PF00004 ATPase family associated with various cellular activities (AAA) M3I41_07800 PF01434 Peptidase family M41 M3I41_07805 PF11734 TilS substrate C-terminal domain M3I41_07805 PF01171 PP-loop family M3I41_07805 PF00156 Phosphoribosyl transferase domain M3I41_07810 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M3I41_07815 PF07690 Major Facilitator Superfamily M3I41_07825 PF00719 Inorganic pyrophosphatase M3I41_07830 PF00877 NlpC/P60 family M3I41_07835 PF01915 Glycosyl hydrolase family 3 C-terminal domain M3I41_07835 PF00933 Glycosyl hydrolase family 3 N terminal domain M3I41_07840 PF12146 Serine aminopeptidase, S33 M3I41_07850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M3I41_07850 PF00391 PEP-utilising enzyme, mobile domain M3I41_07850 PF02896 PEP-utilising enzyme, TIM barrel domain M3I41_07855 PF00004 ATPase family associated with various cellular activities (AAA) M3I41_07855 PF07724 AAA domain (Cdc48 subfamily) M3I41_07855 PF17871 AAA lid domain M3I41_07855 PF02861 Clp amino terminal domain, pathogenicity island component M3I41_07855 PF10431 C-terminal, D2-small domain, of ClpB protein M3I41_07865 PF02580 D-Tyr-tRNA(Tyr) deacylase M3I41_07875 PF01571 Aminomethyltransferase folate-binding domain M3I41_07880 PF08768 Domain of unknown function (DUF1794) M3I41_07890 PF00486 Transcriptional regulatory protein, C terminal M3I41_07895 PF14602 Hexapeptide repeat of succinyl-transferase M3I41_07895 PF12464 Maltose acetyltransferase M3I41_07930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3I41_07930 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3I41_07940 PF07691 PA14 domain M3I41_07940 PF02838 Glycosyl hydrolase family 20, domain 2 M3I41_07940 PF00728 Glycosyl hydrolase family 20, catalytic domain M3I41_07950 PF08241 Methyltransferase domain M3I41_07965 PF00005 ABC transporter M3I41_07975 PF01545 Cation efflux family M3I41_07990 PF00291 Pyridoxal-phosphate dependent enzyme M3I41_07990 PF00585 C-terminal regulatory domain of Threonine dehydratase M3I41_07995 PF00920 Dehydratase family M3I41_08000 PF03816 Cell envelope-related transcriptional attenuator domain M3I41_08005 PF00005 ABC transporter M3I41_08010 PF01195 Peptidyl-tRNA hydrolase M3I41_08015 PF01386 Ribosomal L25p family M3I41_08015 PF14693 Ribosomal protein TL5, C-terminal domain M3I41_08020 PF00072 Response regulator receiver domain M3I41_08020 PF00196 Bacterial regulatory proteins, luxR family M3I41_08035 PF00005 ABC transporter M3I41_08055 PF00664 ABC transporter transmembrane region M3I41_08055 PF00005 ABC transporter M3I41_08060 PF01757 Acyltransferase family M3I41_08070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M3I41_08070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3I41_08075 PF13614 AAA domain M3I41_08100 PF01487 Type I 3-dehydroquinase M3I41_08105 PF02541 Ppx/GppA phosphatase family M3I41_08120 PF00113 Enolase, C-terminal TIM barrel domain M3I41_08120 PF03952 Enolase, N-terminal domain M3I41_08140 PF17757 UvrB interaction domain M3I41_08140 PF03461 TRCF domain M3I41_08140 PF00271 Helicase conserved C-terminal domain M3I41_08140 PF02559 CarD-like/TRCF domain M3I41_08140 PF00270 DEAD/DEAH box helicase M3I41_08145 PF01531 Glycosyl transferase family 11 M3I41_08150 PF00534 Glycosyl transferases group 1 M3I41_08150 PF00535 Glycosyl transferase family 2 M3I41_08165 PF02348 Cytidylyltransferase M3I41_08170 PF03102 NeuB family M3I41_08170 PF08666 SAF domain M3I41_08180 PF13439 Glycosyltransferase Family 4 M3I41_08190 PF00535 Glycosyl transferase family 2 M3I41_08195 PF17101 Stealth protein CR1, conserved region 1 M3I41_08195 PF00534 Glycosyl transferases group 1 M3I41_08195 PF11380 Stealth protein CR2, conserved region 2 M3I41_08195 PF17103 Stealth protein CR4, conserved region 4 M3I41_08195 PF17102 Stealth protein CR3, conserved region 3 M3I41_08200 PF02397 Bacterial sugar transferase M3I41_08210 PF00535 Glycosyl transferase family 2 M3I41_08210 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 M3I41_08215 PF14572 Phosphoribosyl synthetase-associated domain M3I41_08215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M3I41_08220 PF00132 Bacterial transferase hexapeptide (six repeats) M3I41_08220 PF12804 MobA-like NTP transferase domain M3I41_08230 PF00440 Bacterial regulatory proteins, tetR family M3I41_08240 PF16326 ABC transporter C-terminal domain M3I41_08240 PF12848 ABC transporter M3I41_08240 PF00005 ABC transporter M3I41_08245 PF00288 GHMP kinases N terminal domain M3I41_08245 PF08544 GHMP kinases C terminal M3I41_08260 PF00293 NUDIX domain M3I41_08285 PF09594 Glycosyltransferase family 87 M3I41_08300 PF01026 TatD related DNase M3I41_08305 PF09334 tRNA synthetases class I (M) M3I41_08325 PF00857 Isochorismatase family M3I41_08330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M3I41_08335 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M3I41_08335 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase M3I41_08365 PF00561 alpha/beta hydrolase fold M3I41_08370 PF00710 Asparaginase, N-terminal M3I41_08370 PF17763 Glutaminase/Asparaginase C-terminal domain M3I41_08375 PF00324 Amino acid permease M3I41_08395 PF13823 Alcohol dehydrogenase GroES-associated M3I41_08395 PF00107 Zinc-binding dehydrogenase M3I41_08395 PF08240 Alcohol dehydrogenase GroES-like domain M3I41_08400 PF13411 MerR HTH family regulatory protein M3I41_08415 PF02384 N-6 DNA Methylase M3I41_08420 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M3I41_08420 PF00271 Helicase conserved C-terminal domain M3I41_08420 PF08463 EcoEI R protein C-terminal M3I41_08420 PF04851 Type III restriction enzyme, res subunit M3I41_08430 PF02463 RecF/RecN/SMC N terminal domain M3I41_08460 PF13936 Helix-turn-helix domain M3I41_08460 PF00665 Integrase core domain M3I41_08465 PF00005 ABC transporter M3I41_08485 PF01118 Semialdehyde dehydrogenase, NAD binding domain M3I41_08485 PF02774 Semialdehyde dehydrogenase, dimerisation domain M3I41_08490 PF13840 ACT domain M3I41_08490 PF01842 ACT domain M3I41_08490 PF00696 Amino acid kinase family M3I41_08495 PF02132 RecR protein M3I41_08495 PF00633 Helix-hairpin-helix motif M3I41_08495 PF13662 Toprim domain M3I41_08500 PF12169 DNA polymerase III subunits gamma and tau domain III M3I41_08520 PF00999 Sodium/hydrogen exchanger family M3I41_08535 PF05958 tRNA (Uracil-5-)-methyltransferase M3I41_08540 PF01209 ubiE/COQ5 methyltransferase family M3I41_08560 PF03453 MoeA N-terminal region (domain I and II) M3I41_08560 PF00994 Probable molybdopterin binding domain M3I41_08560 PF03454 MoeA C-terminal region (domain IV) M3I41_08565 PF01812 5-formyltetrahydrofolate cyclo-ligase family M3I41_08575 PF01741 Large-conductance mechanosensitive channel, MscL M3I41_08590 PF16859 Tetracyclin repressor-like, C-terminal domain M3I41_08590 PF00440 Bacterial regulatory proteins, tetR family M3I41_08595 PF07690 Major Facilitator Superfamily M3I41_08600 PF00795 Carbon-nitrogen hydrolase M3I41_08600 PF02540 NAD synthase M3I41_08620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3I41_08620 PF00005 ABC transporter M3I41_08625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3I41_08630 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_08635 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_08635 PF12911 N-terminal TM domain of oligopeptide transport permease C M3I41_08645 PF00183 Hsp90 protein M3I41_08660 PF00691 OmpA family M3I41_08660 PF00223 Photosystem I psaA/psaB protein M3I41_08670 PF00582 Universal stress protein family M3I41_08675 PF00877 NlpC/P60 family M3I41_08680 PF02742 Iron dependent repressor, metal binding and dimerisation domain M3I41_08680 PF18357 Diphteria toxin repressor SH3 domain M3I41_08680 PF01325 Iron dependent repressor, N-terminal DNA binding domain M3I41_08690 PF00860 Permease family M3I41_08700 PF11228 Protein of unknown function (DUF3027) M3I41_08705 PF00117 Glutamine amidotransferase class-I M3I41_08705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M3I41_08715 PF04012 PspA/IM30 family M3I41_08725 PF00072 Response regulator receiver domain M3I41_08725 PF00486 Transcriptional regulatory protein, C terminal M3I41_08730 PF00512 His Kinase A (phospho-acceptor) domain M3I41_08730 PF00672 HAMP domain M3I41_08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_08745 PF03734 L,D-transpeptidase catalytic domain M3I41_08745 PF17969 L,D-transpeptidase C-terminal domain M3I41_08750 PF00118 TCP-1/cpn60 chaperonin family M3I41_08760 PF03167 Uracil DNA glycosylase superfamily M3I41_08765 PF13823 Alcohol dehydrogenase GroES-associated M3I41_08765 PF00107 Zinc-binding dehydrogenase M3I41_08765 PF08240 Alcohol dehydrogenase GroES-like domain M3I41_08780 PF00342 Phosphoglucose isomerase M3I41_08790 PF00005 ABC transporter M3I41_08790 PF17912 MalK OB fold domain M3I41_08805 PF08532 Beta-galactosidase trimerisation domain M3I41_08805 PF08533 Beta-galactosidase C-terminal domain M3I41_08805 PF02449 Beta-galactosidase M3I41_08810 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3I41_08810 PF00588 SpoU rRNA Methylase family M3I41_08815 PF09190 DALR domain M3I41_08815 PF01406 tRNA synthetases class I (C) catalytic domain M3I41_08820 PF02542 YgbB family M3I41_08825 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M3I41_08830 PF02559 CarD-like/TRCF domain M3I41_08835 PF00300 Histidine phosphatase superfamily (branch 1) M3I41_08840 PF11774 Lsr2 M3I41_08865 PF14437 MafB19-like deaminase M3I41_08875 PF03180 NLPA lipoprotein M3I41_08880 PF00528 Binding-protein-dependent transport system inner membrane component M3I41_08885 PF09383 NIL domain M3I41_08885 PF00005 ABC transporter M3I41_08895 PF01451 Low molecular weight phosphotyrosine protein phosphatase M3I41_08915 PF00268 Ribonucleotide reductase, small chain M3I41_08925 PF07972 NrdI Flavodoxin like M3I41_08930 PF00462 Glutaredoxin M3I41_08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3I41_08935 PF00672 HAMP domain M3I41_08935 PF00512 His Kinase A (phospho-acceptor) domain M3I41_08940 PF00072 Response regulator receiver domain M3I41_08940 PF00486 Transcriptional regulatory protein, C terminal M3I41_08945 PF03313 Serine dehydratase alpha chain M3I41_08945 PF03315 Serine dehydratase beta chain M3I41_08950 PF08543 Phosphomethylpyrimidine kinase M3I41_08955 PF01554 MatE M3I41_08960 PF00772 DnaB-like helicase N terminal domain M3I41_08960 PF03796 DnaB-like helicase C terminal domain M3I41_08965 PF03948 Ribosomal protein L9, C-terminal domain M3I41_08965 PF01281 Ribosomal protein L9, N-terminal domain M3I41_08970 PF01084 Ribosomal protein S18 M3I41_08975 PF00436 Single-strand binding protein family M3I41_08980 PF01250 Ribosomal protein S6 M3I41_08985 PF00905 Penicillin binding protein transpeptidase domain M3I41_08985 PF00912 Transglycosylase M3I41_08995 PF01743 Poly A polymerase head domain M3I41_08995 PF12627 Probable RNA and SrmB- binding site of polymerase A M3I41_08995 PF13735 tRNA nucleotidyltransferase domain 2 putative M3I41_09000 PF00293 NUDIX domain M3I41_09010 PF03023 Lipid II flippase MurJ M3I41_09015 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3I41_09020 PF00085 Thioredoxin M3I41_09025 PF00155 Aminotransferase class I and II M3I41_09030 PF07478 D-ala D-ala ligase C-terminus M3I41_09030 PF01820 D-ala D-ala ligase N-terminus M3I41_09035 PF05525 Branched-chain amino acid transport protein M3I41_09040 PF00005 ABC transporter M3I41_09050 PF04954 Siderophore-interacting protein M3I41_09050 PF08021 Siderophore-interacting FAD-binding domain M3I41_09050 PF00664 ABC transporter transmembrane region M3I41_09050 PF00005 ABC transporter M3I41_09055 PF00005 ABC transporter M3I41_09070 PF17762 HTH domain found in ParB protein M3I41_09070 PF02195 ParB-like nuclease domain M3I41_09075 PF13614 AAA domain M3I41_09085 PF02527 rRNA small subunit methyltransferase G M3I41_09095 PF02096 60Kd inner membrane protein M3I41_09100 PF01809 Putative membrane protein insertion efficiency factor M3I41_09105 PF00825 Ribonuclease P M3I41_09110 PF00468 Ribosomal protein L34