locus-tag	class	description
ATCC27039_00010	COG0513	Belongs to the DEAD box helicase family
ATCC27039_00050	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ATCC27039_00100	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ATCC27039_00110	COG0745	RESPONSE REGULATOR receiver
ATCC27039_00140	COG3485	protocatechuate 3,4-dioxygenase
ATCC27039_00170	COG1490	D-aminoacyl-tRNA deacylase activity
ATCC27039_00220	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATCC27039_00310	COG4585	Histidine kinase
ATCC27039_00360	COG0297	glycogen (starch) synthase activity
ATCC27039_00360	COG0438	transferase activity, transferring glycosyl groups
ATCC27039_00380	COG2211	Major facilitator Superfamily
ATCC27039_00400	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATCC27039_00400	COG0574	Belongs to the PEP-utilizing enzyme family
ATCC27039_00420	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ATCC27039_00460	COG4585	Histidine kinase
ATCC27039_00470	COG2197	response regulator
ATCC27039_00560	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATCC27039_00570	COG2873	o-acetylhomoserine
ATCC27039_00600	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ATCC27039_00610	COG2027	D-alanyl-D-alanine carboxypeptidase
ATCC27039_00630	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ATCC27039_00650	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ATCC27039_00660	COG0302	gtp cyclohydrolase
ATCC27039_00690	COG2076	Multidrug Resistance protein
ATCC27039_00710	COG2197	response regulator
ATCC27039_00730	COG1136	(ABC) transporter
ATCC27039_00740	COG1136	(ABC) transporter
ATCC27039_00740	COG0577	efflux transmembrane transporter activity
ATCC27039_00760	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ATCC27039_00770	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ATCC27039_00830	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ATCC27039_00840	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ATCC27039_00850	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ATCC27039_00880	COG3599	regulation of cell shape
ATCC27039_00910	COG1136	(ABC) transporter
ATCC27039_00930	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ATCC27039_00940	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ATCC27039_00950	COG1120	ATPase activity
ATCC27039_00960	COG4592	Periplasmic binding protein
ATCC27039_00980	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ATCC27039_01050	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ATCC27039_01070	COG3104	oligopeptide transport
ATCC27039_01080	COG3104	oligopeptide transport
ATCC27039_01120	COG1556	Lactate utilization protein
ATCC27039_01130	COG1139	Iron-sulfur cluster binding protein
ATCC27039_01140	COG0247	lactate metabolic process
ATCC27039_01190	COG2217	Heavy metal translocating P-type atpase
ATCC27039_01200	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ATCC27039_01210	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ATCC27039_01220	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ATCC27039_01230	COG2390	Transcriptional regulator
ATCC27039_01240	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ATCC27039_01290	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
ATCC27039_01330	COG0477	Major facilitator Superfamily
ATCC27039_01380	COG2376	Dihydroxyacetone kinase
ATCC27039_01390	COG1461	Dihydroxyacetone kinase
ATCC27039_01400	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATCC27039_01400	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
ATCC27039_01400	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATCC27039_01440	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ATCC27039_01460	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ATCC27039_01470	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ATCC27039_01510	COG0436	Aminotransferase
ATCC27039_01520	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ATCC27039_01530	COG0250	Participates in transcription elongation, termination and antitermination
ATCC27039_01540	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ATCC27039_01550	COG0081	regulation of translation
ATCC27039_01580	COG2885	chlorophyll binding
ATCC27039_01610	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ATCC27039_01620	COG0049	tRNA binding
ATCC27039_01630	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ATCC27039_01640	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ATCC27039_01680	COG0051	transcription antitermination factor activity, RNA binding
ATCC27039_01690	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ATCC27039_01710	COG0089	rRNA binding
ATCC27039_01720	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ATCC27039_01730	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ATCC27039_01740	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ATCC27039_01750	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ATCC27039_01760	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ATCC27039_01770	COG0255	Belongs to the universal ribosomal protein uL29 family
ATCC27039_01780	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ATCC27039_01790	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ATCC27039_01800	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ATCC27039_01810	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ATCC27039_01820	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ATCC27039_01830	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ATCC27039_01840	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ATCC27039_01850	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ATCC27039_01860	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ATCC27039_01870	COG1841	ribosomal large subunit assembly
ATCC27039_01900	COG0563	adenylate kinase activity
ATCC27039_01910	COG0024	Methionine aminopeptidase
ATCC27039_01920	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ATCC27039_01930	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ATCC27039_01940	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ATCC27039_01950	COG0202	RNA polymerase activity
ATCC27039_01990	COG1285	pathogenesis
ATCC27039_02000	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ATCC27039_02010	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ATCC27039_02030	COG0101	tRNA pseudouridine synthase activity
ATCC27039_02040	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ATCC27039_02050	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ATCC27039_02150	COG1072	(Pantothenic acid kinase))
ATCC27039_02170	COG0736	holo-[acyl-carrier-protein] synthase activity
ATCC27039_02200	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ATCC27039_02210	COG0802	atpase or kinase
ATCC27039_02260	COG1053	succinate dehydrogenase
ATCC27039_02270	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ATCC27039_02310	COG2818	Glycosylase
ATCC27039_02320	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ATCC27039_02340	COG1132	(ABC) transporter
ATCC27039_02340	COG2375	cellular response to nickel ion
ATCC27039_02360	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ATCC27039_02380	COG2949	membrane
ATCC27039_02390	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ATCC27039_02440	COG0516	GMP reductase activity
ATCC27039_02450	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATCC27039_02480	COG0328	RNA-DNA hybrid ribonuclease activity
ATCC27039_02500	COG2197	response regulator
ATCC27039_02510	COG4585	Histidine kinase
ATCC27039_02540	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ATCC27039_02600	COG1082	Xylose isomerase domain protein TIM barrel
ATCC27039_02620	COG1609	Transcriptional regulator
ATCC27039_02640	COG1082	Xylose isomerase domain protein TIM barrel
ATCC27039_02650	COG2814	Major facilitator Superfamily
ATCC27039_02660	COG0673	inositol 2-dehydrogenase activity
ATCC27039_02680	COG2017	converts alpha-aldose to the beta-anomer
ATCC27039_02690	COG0673	inositol 2-dehydrogenase activity
ATCC27039_02700	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ATCC27039_02710	COG2188	Transcriptional regulator
ATCC27039_02740	COG3718	enzyme involved in inositol metabolism
ATCC27039_02750	COG3962	Belongs to the TPP enzyme family
ATCC27039_02790	COG0673	inositol 2-dehydrogenase activity
ATCC27039_02800	COG1082	Xylose isomerase domain protein TIM barrel
ATCC27039_02810	COG2814	Major facilitator Superfamily
ATCC27039_02850	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ATCC27039_02850	COG0519	Catalyzes the synthesis of GMP from XMP
ATCC27039_02940	COG1131	(ABC) transporter
ATCC27039_02950	COG4585	Histidine kinase
ATCC27039_02960	COG2197	response regulator
ATCC27039_02970	COG3845	ABC transporter
ATCC27039_03040	COG0656	L-ascorbic acid biosynthetic process
ATCC27039_03050	COG0583	DNA-binding transcription factor activity
ATCC27039_03100	COG2267	carboxylic ester hydrolase activity
ATCC27039_03120	COG1401	restriction endodeoxyribonuclease activity
ATCC27039_03130	COG4268	DNA restriction-modification system
ATCC27039_03140	COG3654	unkown
ATCC27039_03210	COG2205	protein histidine kinase activity
ATCC27039_03220	COG2197	response regulator
ATCC27039_03240	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATCC27039_03260	COG0356	it plays a direct role in the translocation of protons across the membrane
ATCC27039_03280	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ATCC27039_03290	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ATCC27039_03300	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ATCC27039_03310	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ATCC27039_03320	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ATCC27039_03330	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ATCC27039_03350	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
ATCC27039_03370	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ATCC27039_03460	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ATCC27039_03470	COG0830	nickel cation binding
ATCC27039_03490	COG0804	urea catabolic process
ATCC27039_03500	COG0832	Belongs to the urease beta subunit family
ATCC27039_03520	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ATCC27039_03530	COG0254	rRNA binding
ATCC27039_03540	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ATCC27039_03550	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ATCC27039_03560	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ATCC27039_03580	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ATCC27039_03590	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ATCC27039_03600	COG1621	beta-fructofuranosidase activity
ATCC27039_03660	COG0577	efflux transmembrane transporter activity
ATCC27039_03670	COG0577	efflux transmembrane transporter activity
ATCC27039_03670	COG1136	(ABC) transporter
ATCC27039_03690	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ATCC27039_03710	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
ATCC27039_03750	COG1744	ABC transporter substrate-binding protein PnrA-like
ATCC27039_03760	COG3845	ABC transporter
ATCC27039_03770	COG4603	Belongs to the binding-protein-dependent transport system permease family
ATCC27039_03780	COG1079	Belongs to the binding-protein-dependent transport system permease family
ATCC27039_03830	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ATCC27039_03840	COG0803	Belongs to the bacterial solute-binding protein 9 family
ATCC27039_03850	COG1121	(ABC) transporter
ATCC27039_03880	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATCC27039_03890	COG1611	Belongs to the LOG family
ATCC27039_03920	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ATCC27039_03950	COG2239	Acts as a magnesium transporter
ATCC27039_03970	COG1082	Xylose isomerase domain protein TIM barrel
ATCC27039_04010	COG0006	proline dipeptidase activity
ATCC27039_04020	COG0673	inositol 2-dehydrogenase activity
ATCC27039_04040	COG2095	MarC family integral membrane protein
ATCC27039_04050	COG0513	Belongs to the DEAD box helicase family
ATCC27039_04140	COG0114	fumarate hydratase activity
ATCC27039_04170	COG1349	DNA-binding transcription factor activity
ATCC27039_04180	COG0346	lactoylglutathione lyase activity
ATCC27039_04200	COG1125	glycine betaine transport
ATCC27039_04200	COG0517	IMP dehydrogenase activity
ATCC27039_04210	COG1174	glycine betaine transport
ATCC27039_04250	COG1733	regulation of RNA biosynthetic process
ATCC27039_04270	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ATCC27039_04330	COG1674	ftsk spoiiie
ATCC27039_04340	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ATCC27039_04360	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ATCC27039_04370	COG0154	amidase activity
ATCC27039_04380	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ATCC27039_04420	COG2966	Psort location CytoplasmicMembrane, score
ATCC27039_04430	COG0569	domain protein
ATCC27039_04430	COG2985	domain, Protein
ATCC27039_04460	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ATCC27039_04470	COG2814	Major facilitator Superfamily
ATCC27039_04480	COG1309	transcriptional regulator
ATCC27039_04490	COG0473	3-isopropylmalate dehydrogenase activity
ATCC27039_04520	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ATCC27039_04530	COG1316	TRANSCRIPTIONal
ATCC27039_04540	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ATCC27039_04550	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
ATCC27039_04560	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ATCC27039_04640	COG1134	teichoic acid transport
ATCC27039_04680	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATCC27039_04700	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ATCC27039_04720	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ATCC27039_04730	COG0515	serine threonine protein kinase
ATCC27039_04740	COG1131	(ABC) transporter
ATCC27039_04740	COG0842	Transport permease protein
ATCC27039_04740	COG1716	ATPase activity
ATCC27039_04750	COG1162	GTPase activity
ATCC27039_04760	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ATCC27039_04790	COG2884	Cell division ATP-binding protein ftsE
ATCC27039_04860	COG2188	Transcriptional regulator
ATCC27039_04880	COG0747	negative chemotaxis
ATCC27039_04900	COG0444	Belongs to the ABC transporter superfamily
ATCC27039_04910	COG4608	Belongs to the ABC transporter superfamily
ATCC27039_04940	COG1175	transmembrane transport
ATCC27039_04960	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATCC27039_04970	COG1940	carbohydrate kinase activity
ATCC27039_04980	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
ATCC27039_05020	COG0363	glucosamine-6-phosphate deaminase activity
ATCC27039_05060	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ATCC27039_05080	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ATCC27039_05120	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ATCC27039_05130	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ATCC27039_05190	COG0667	Aldo Keto reductase
ATCC27039_05200	COG0604	alcohol dehydrogenase
ATCC27039_05200	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ATCC27039_05200	COG3321	synthase
ATCC27039_05200	COG4221	oxidoreductase activity
ATCC27039_05490	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ATCC27039_05540	COG3304	Inner membrane component domain
ATCC27039_05550	COG0833	amino acid
ATCC27039_05560	COG2040	homocysteine
ATCC27039_05600	COG1115	amino acid carrier protein
ATCC27039_05610	COG1115	amino acid carrier protein
ATCC27039_05620	COG1115	amino acid carrier protein
ATCC27039_05630	COG1115	amino acid carrier protein
ATCC27039_05640	COG0179	Fumarylacetoacetate (FAA) hydrolase
ATCC27039_05670	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ATCC27039_05710	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ATCC27039_05730	COG1674	ftsk spoiiie
ATCC27039_05760	COG1058	Belongs to the CinA family
ATCC27039_05760	COG1546	Belongs to the CinA family
ATCC27039_05770	COG1396	sequence-specific DNA binding
ATCC27039_05790	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ATCC27039_05810	COG2759	Belongs to the formate--tetrahydrofolate ligase family
ATCC27039_05850	COG0395	ABC-type sugar transport system, permease component
ATCC27039_05880	COG1940	carbohydrate kinase activity
ATCC27039_05880	COG1846	Transcriptional regulator
ATCC27039_05890	COG1252	NADH dehydrogenase
ATCC27039_05900	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ATCC27039_05950	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ATCC27039_05960	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ATCC27039_05980	COG1114	Component of the transport system for branched-chain amino acids
ATCC27039_06000	COG2813	Specifically methylates the guanine in position
ATCC27039_06020	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ATCC27039_06050	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ATCC27039_06070	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ATCC27039_06110	COG0066	3-isopropylmalate dehydratase activity
ATCC27039_06120	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ATCC27039_06140	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ATCC27039_06170	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATCC27039_06190	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ATCC27039_06210	COG1461	Dihydroxyacetone kinase
ATCC27039_06240	COG0235	Class ii aldolase
ATCC27039_06260	COG1070	Carbohydrate kinase
ATCC27039_06270	COG4154	Belongs to the RbsD FucU family
ATCC27039_06280	COG0738	Major facilitator superfamily
ATCC27039_06300	COG0395	ABC-type sugar transport system, permease component
ATCC27039_06310	COG1175	transmembrane transport
ATCC27039_06330	COG1609	Transcriptional regulator
ATCC27039_06350	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ATCC27039_06380	COG0571	ribonuclease III activity
ATCC27039_06390	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ATCC27039_06420	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ATCC27039_06430	COG4988	ABC transporter
ATCC27039_06440	COG1294	oxidase, subunit
ATCC27039_06450	COG1271	oxidase subunit
ATCC27039_06460	COG1530	ribonuclease E activity
ATCC27039_06470	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ATCC27039_06480	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ATCC27039_06490	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ATCC27039_06500	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ATCC27039_06510	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ATCC27039_06540	COG5002	protein histidine kinase activity
ATCC27039_06550	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ATCC27039_06580	COG1132	(ABC) transporter
ATCC27039_06590	COG0297	glycogen (starch) synthase activity
ATCC27039_06620	COG1349	DNA-binding transcription factor activity
ATCC27039_06640	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ATCC27039_06660	COG0799	negative regulation of ribosome biogenesis
ATCC27039_06670	COG0406	alpha-ribazole phosphatase activity
ATCC27039_06680	COG2095	MarC family integral membrane protein
ATCC27039_06710	COG0813	purine-nucleoside phosphorylase activity
ATCC27039_06720	COG0733	neurotransmitter:sodium symporter activity
ATCC27039_06780	COG0537	adenosine 5'-monophosphoramidase activity
ATCC27039_06810	COG0789	Transcriptional regulator
ATCC27039_06820	COG0495	leucyl-tRNA aminoacylation
ATCC27039_06830	COG0433	COG0433 Predicted ATPase
ATCC27039_06840	COG0438	transferase activity, transferring glycosyl groups
ATCC27039_06850	COG1307	EDD domain protein, DegV family
ATCC27039_06890	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ATCC27039_06900	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ATCC27039_06900	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ATCC27039_06930	COG4868	Belongs to the UPF0371 family
ATCC27039_06940	COG0268	Binds directly to 16S ribosomal RNA
ATCC27039_06950	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ATCC27039_07040	COG0159	tryptophan synthase activity
ATCC27039_07070	COG0512	Glutamine amidotransferase of anthranilate synthase
ATCC27039_07080	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ATCC27039_07090	COG1404	Belongs to the peptidase S8 family
ATCC27039_07110	COG0481	GTPase activity
ATCC27039_07130	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ATCC27039_07140	COG2807	transmembrane transport
ATCC27039_07160	COG1673	EVE domain
ATCC27039_07210	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ATCC27039_07250	COG1420	regulation of RNA biosynthetic process
ATCC27039_07260	COG0484	heat shock protein binding
ATCC27039_07270	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ATCC27039_07330	COG0842	Transport permease protein
ATCC27039_07370	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ATCC27039_07390	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ATCC27039_07400	COG0506	proline dehydrogenase activity
ATCC27039_07400	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ATCC27039_07400	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ATCC27039_07410	COG0477	Major facilitator Superfamily
ATCC27039_07430	COG1476	TRANSCRIPTIONal
ATCC27039_07460	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ATCC27039_07470	COG1381	Involved in DNA repair and RecF pathway recombination
ATCC27039_07480	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ATCC27039_07500	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ATCC27039_07510	COG1116	anion transmembrane transporter activity
ATCC27039_07530	COG0423	glycine-tRNA ligase activity
ATCC27039_07590	COG1028	Short-chain dehydrogenase reductase Sdr
ATCC27039_07600	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ATCC27039_07620	COG0560	Phosphoserine phosphatase
ATCC27039_07640	COG0297	glycogen (starch) synthase activity
ATCC27039_07720	COG0488	(ABC) transporter
ATCC27039_07750	COG0545	Peptidyl-prolyl cis-trans isomerase
ATCC27039_07800	COG0205	6-phosphofructokinase activity
ATCC27039_07820	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ATCC27039_07830	COG0515	serine threonine protein kinase
ATCC27039_07830	COG2815	serine threonine protein kinase
ATCC27039_07840	COG0142	geranyltranstransferase activity
ATCC27039_07850	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATCC27039_07860	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
ATCC27039_07870	COG0352	thiamine-phosphate diphosphorylase activity
ATCC27039_07880	COG0351	phosphomethylpyrimidine kinase
ATCC27039_07940	COG0187	DNA topoisomerase II activity
ATCC27039_07950	COG0454	-acetyltransferase
ATCC27039_07950	COG0456	acetyltransferase
ATCC27039_07970	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ATCC27039_08060	COG0569	domain protein
ATCC27039_08070	COG0531	amino acid
ATCC27039_08080	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ATCC27039_08110	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ATCC27039_08130	COG1309	transcriptional regulator
ATCC27039_08140	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATCC27039_08170	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ATCC27039_08180	COG4221	oxidoreductase activity
ATCC27039_08190	COG1881	PFAM PEBP family protein
ATCC27039_08220	COG0671	phosphoesterase, PA-phosphatase related
ATCC27039_08230	COG1435	thymidine kinase activity
ATCC27039_08310	COG0587	DNA-directed DNA polymerase activity
ATCC27039_08390	COG0477	Major facilitator Superfamily
ATCC27039_08410	COG0028	Belongs to the TPP enzyme family
ATCC27039_08420	COG0339	signal peptide processing
ATCC27039_08430	COG1252	NADH dehydrogenase
ATCC27039_08450	COG0667	Aldo Keto reductase
ATCC27039_08460	COG0425	Belongs to the sulfur carrier protein TusA family
ATCC27039_08470	COG2391	methyltransferase activity
ATCC27039_08490	COG0517	IMP dehydrogenase activity
ATCC27039_08490	COG1994	Peptidase M50
ATCC27039_08500	COG2837	iron assimilation
ATCC27039_08530	COG1222	aaa ATPase
ATCC27039_08560	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
ATCC27039_08580	COG0107	imidazoleglycerol-phosphate synthase activity
ATCC27039_08630	COG0134	indole-3-glycerol-phosphate synthase activity
ATCC27039_08640	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ATCC27039_08680	COG2050	protein possibly involved in aromatic compounds catabolism
ATCC27039_08710	COG0539	negative regulation of cytoplasmic translation
ATCC27039_08730	COG0237	dephospho-CoA kinase activity
ATCC27039_08740	COG0556	nucleotide-excision repair
ATCC27039_08840	COG1595	DNA-templated transcription, initiation
ATCC27039_08870	COG0322	excinuclease ABC activity
ATCC27039_08880	COG3585	molybdate ion transport
ATCC27039_08900	COG1263	PTS System
ATCC27039_08900	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ATCC27039_08900	COG2190	(PTS) system
ATCC27039_08930	COG1660	Displays ATPase and GTPase activities
ATCC27039_08950	COG1481	regulation of sporulation
ATCC27039_08960	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ATCC27039_08970	COG0126	phosphoglycerate kinase activity
ATCC27039_08980	COG0149	triose-phosphate isomerase activity
ATCC27039_08990	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ATCC27039_09030	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ATCC27039_09060	COG1160	GTP binding
ATCC27039_09100	COG0166	Belongs to the GPI family
ATCC27039_09120	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ATCC27039_09130	COG0561	phosphatase activity
ATCC27039_09200	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ATCC27039_09220	COG1716	ATPase activity
ATCC27039_09260	COG0667	Aldo Keto reductase
ATCC27039_09270	COG0443	Heat shock 70 kDa protein
ATCC27039_09300	COG1621	beta-fructofuranosidase activity
ATCC27039_09310	COG1263	PTS System
ATCC27039_09310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ATCC27039_09310	COG2190	(PTS) system
ATCC27039_09320	COG1609	Transcriptional regulator
ATCC27039_09350	COG0577	efflux transmembrane transporter activity
ATCC27039_09360	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ATCC27039_09400	COG0205	6-phosphofructokinase activity
ATCC27039_09420	COG1216	Glycosyl transferase, family 2
ATCC27039_09450	COG1136	(ABC) transporter
ATCC27039_09470	COG2197	response regulator
ATCC27039_09480	COG2354	Protein conserved in bacteria
ATCC27039_09510	COG0805	protein transport
ATCC27039_09520	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ATCC27039_09560	COG4585	Histidine kinase
ATCC27039_09570	COG2197	response regulator
ATCC27039_09580	COG1131	(ABC) transporter
ATCC27039_09600	COG0140	phosphoribosyl-ATP diphosphatase activity
ATCC27039_09610	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ATCC27039_09620	COG0477	Major facilitator Superfamily
ATCC27039_09640	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ATCC27039_09650	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ATCC27039_09660	COG1929	Belongs to the glycerate kinase type-1 family
ATCC27039_09670	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ATCC27039_09690	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATCC27039_09700	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ATCC27039_09710	COG4770	biotin carboxylase activity
ATCC27039_09720	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ATCC27039_09740	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ATCC27039_09770	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ATCC27039_09780	COG0549	Belongs to the carbamate kinase family
ATCC27039_09790	COG1834	amidinotransferase
ATCC27039_09810	COG0477	Major facilitator Superfamily
ATCC27039_09840	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ATCC27039_09860	COG1758	RNA polymerase activity
ATCC27039_09870	COG0194	GDP metabolic process
ATCC27039_09890	COG0284	orotidine-5'-phosphate decarboxylase activity
ATCC27039_09900	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ATCC27039_09920	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ATCC27039_09930	COG0540	Belongs to the ATCase OTCase family
ATCC27039_09940	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ATCC27039_09980	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATCC27039_09990	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ATCC27039_10000	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ATCC27039_10020	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ATCC27039_10030	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ATCC27039_10040	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ATCC27039_10050	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ATCC27039_10060	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ATCC27039_10070	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ATCC27039_10090	COG0009	L-threonylcarbamoyladenylate synthase
ATCC27039_10150	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ATCC27039_10210	COG1116	anion transmembrane transporter activity
ATCC27039_10210	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ATCC27039_10230	COG1695	Transcriptional regulator
ATCC27039_10270	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ATCC27039_10290	COG0124	histidyl-tRNA synthetase
ATCC27039_10320	COG1196	nuclear chromosome segregation
ATCC27039_10330	COG0789	Transcriptional regulator
ATCC27039_10350	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATCC27039_10360	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ATCC27039_10370	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATCC27039_10380	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATCC27039_10400	COG2255	four-way junction helicase activity
ATCC27039_10410	COG0632	four-way junction helicase activity
ATCC27039_10420	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ATCC27039_10430	COG0217	transcriptional regulatory protein
ATCC27039_10450	COG1051	belongs to the nudix hydrolase family
ATCC27039_10460	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
ATCC27039_10490	COG0438	transferase activity, transferring glycosyl groups
ATCC27039_10500	COG1560	Kdo2-lipid A biosynthetic process
ATCC27039_10530	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ATCC27039_10640	COG1882	Formate acetyltransferase
ATCC27039_10690	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATCC27039_10700	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATCC27039_10710	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATCC27039_10750	COG0321	lipoyl(octanoyl) transferase activity
ATCC27039_10760	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ATCC27039_10800	COG0765	amino acid transport
ATCC27039_10830	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ATCC27039_10840	COG0174	glutamine synthetase
ATCC27039_10850	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ATCC27039_10880	COG3022	response to hydroperoxide
ATCC27039_10900	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ATCC27039_10920	COG0436	Aminotransferase
ATCC27039_10970	COG2814	Major facilitator Superfamily
ATCC27039_10990	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ATCC27039_11010	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ATCC27039_11030	COG1027	Aspartate ammonia-lyase
ATCC27039_11050	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATCC27039_11100	COG0358	DNA primase activity
ATCC27039_11130	COG2182	Extracellular solute-binding protein
ATCC27039_11150	COG3833	ABC-type maltose transport systems, permease component
ATCC27039_11160	COG1609	Transcriptional regulator
ATCC27039_11170	COG1929	Belongs to the glycerate kinase type-1 family
ATCC27039_11180	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATCC27039_11200	COG0667	Aldo Keto reductase
ATCC27039_11210	COG0167	dihydroorotate dehydrogenase activity
ATCC27039_11250	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ATCC27039_11280	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ATCC27039_11310	COG1131	(ABC) transporter
ATCC27039_11330	COG3189	MarR family transcriptional regulator
ATCC27039_11340	COG2151	metal-sulfur cluster biosynthetic enzyme
ATCC27039_11350	COG0822	iron-sulfur transferase activity
ATCC27039_11370	COG0396	ATPase activity
ATCC27039_11420	COG0504	CTP synthase activity
ATCC27039_11480	COG0497	DNA recombination
ATCC27039_11490	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ATCC27039_11520	COG0647	UMP catabolic process
ATCC27039_11550	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ATCC27039_11560	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATCC27039_11590	COG2094	Belongs to the DNA glycosylase MPG family
ATCC27039_11600	COG0165	Argininosuccinate lyase
ATCC27039_11620	COG0137	argininosuccinate synthase activity
ATCC27039_11630	COG1438	arginine binding
ATCC27039_11640	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ATCC27039_11650	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ATCC27039_11670	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ATCC27039_11720	COG1131	(ABC) transporter
ATCC27039_11800	COG0765	amino acid transport
ATCC27039_11810	COG0765	amino acid transport
ATCC27039_11820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ATCC27039_11830	COG1126	abc transporter atp-binding protein
ATCC27039_11860	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATCC27039_11890	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ATCC27039_11900	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ATCC27039_11910	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ATCC27039_11930	COG1121	(ABC) transporter
ATCC27039_11970	COG0575	Belongs to the CDS family
ATCC27039_11990	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ATCC27039_12000	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ATCC27039_12030	COG0131	Imidazoleglycerol-phosphate dehydratase
ATCC27039_12060	COG0514	ATP-dependent DNA helicase (RecQ)
ATCC27039_12090	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ATCC27039_12110	COG1215	transferase activity, transferring glycosyl groups
ATCC27039_12130	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ATCC27039_12140	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ATCC27039_12180	COG2501	S4 domain
ATCC27039_12190	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ATCC27039_12200	COG0587	DNA-directed DNA polymerase activity
ATCC27039_12210	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ATCC27039_12240	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ATCC27039_12250	COG3599	regulation of cell shape
ATCC27039_12270	COG1799	cell septum assembly
ATCC27039_12280	COG1496	oxidoreductase activity
ATCC27039_12300	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ATCC27039_12320	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATCC27039_12350	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ATCC27039_12360	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATCC27039_12370	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ATCC27039_12380	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ATCC27039_12390	COG0768	penicillin binding
ATCC27039_12410	COG0275	rRNA processing
ATCC27039_12420	COG2001	Belongs to the MraZ family
ATCC27039_12440	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ATCC27039_12480	COG0318	PFAM AMP-dependent synthetase and ligase
ATCC27039_12490	COG0318	PFAM AMP-dependent synthetase and ligase
ATCC27039_12530	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ATCC27039_12550	COG0300	oxidoreductase activity
ATCC27039_12560	COG0612	Peptidase, M16
ATCC27039_12570	COG1185	polyribonucleotide nucleotidyltransferase activity
ATCC27039_12580	COG1454	alcohol dehydrogenase
ATCC27039_12600	COG0196	riboflavin kinase activity
ATCC27039_12620	COG1136	(ABC) transporter
ATCC27039_12620	COG0577	efflux transmembrane transporter activity
ATCC27039_12640	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ATCC27039_12650	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ATCC27039_12670	COG0330	HflC and HflK could
ATCC27039_12710	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ATCC27039_12710	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ATCC27039_12740	COG0779	Required for maturation of 30S ribosomal subunits
ATCC27039_12770	COG0442	prolyl-tRNA aminoacylation
ATCC27039_12850	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ATCC27039_12860	COG0750	zinc metalloprotease
ATCC27039_12870	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ATCC27039_12890	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ATCC27039_12910	COG0233	cytoplasmic translational termination
ATCC27039_12930	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ATCC27039_12940	COG0052	Belongs to the universal ribosomal protein uS2 family
ATCC27039_12970	COG4974	Belongs to the 'phage' integrase family
ATCC27039_13030	COG0792	nuclease activity
ATCC27039_13050	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ATCC27039_13060	COG0681	Belongs to the peptidase S26 family
ATCC27039_13080	COG0681	Belongs to the peptidase S26 family
ATCC27039_13090	COG0336	Belongs to the RNA methyltransferase TrmD family
ATCC27039_13100	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ATCC27039_13110	COG1837	Belongs to the UPF0109 family
ATCC27039_13150	COG4585	Histidine kinase
ATCC27039_13160	COG2197	response regulator
ATCC27039_13190	COG1131	(ABC) transporter
ATCC27039_13200	COG0842	Transport permease protein
ATCC27039_13210	COG4585	Histidine kinase
ATCC27039_13220	COG2197	response regulator
ATCC27039_13250	COG1196	nuclear chromosome segregation
ATCC27039_13260	COG4152	abc transporter atp-binding protein
ATCC27039_13280	COG0105	UTP biosynthetic process
ATCC27039_13290	COG1461	Dihydroxyacetone kinase
ATCC27039_13320	COG1263	PTS System
ATCC27039_13320	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ATCC27039_13320	COG2190	(PTS) system
ATCC27039_13330	COG0366	Alpha amylase catalytic
ATCC27039_13360	COG0285	dihydrofolate synthase activity
ATCC27039_13370	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ATCC27039_13420	COG1215	transferase activity, transferring glycosyl groups
ATCC27039_13430	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ATCC27039_13440	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ATCC27039_13490	COG0656	L-ascorbic acid biosynthetic process
ATCC27039_13510	COG4221	oxidoreductase activity
ATCC27039_13520	COG2056	Na+-H+ antiporter family
ATCC27039_13530	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ATCC27039_13540	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ATCC27039_13550	COG0175	sulfate reduction
ATCC27039_13580	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ATCC27039_13580	COG1648	precorrin-2 dehydrogenase activity
ATCC27039_13590	COG0730	response to heat
ATCC27039_13640	COG1132	(ABC) transporter
ATCC27039_13650	COG1132	(ABC) transporter
ATCC27039_13650	COG2375	cellular response to nickel ion
ATCC27039_13660	COG1122	ATPase activity
ATCC27039_13680	COG1129	ABC transporter
ATCC27039_13710	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
ATCC27039_13730	COG4122	O-methyltransferase activity
ATCC27039_13740	COG1222	aaa ATPase
ATCC27039_13770	COG1609	Transcriptional regulator
ATCC27039_13780	COG0366	Alpha amylase catalytic
ATCC27039_13810	COG1653	transport
ATCC27039_13840	COG0287	Prephenate dehydrogenase
ATCC27039_13840	COG1605	Chorismate mutase
ATCC27039_13850	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ATCC27039_13860	COG0740	serine-type endopeptidase activity
ATCC27039_13900	COG0544	peptidyl-prolyl cis-trans isomerase activity
ATCC27039_13930	COG1739	Uncharacterized protein family UPF0029
ATCC27039_13950	COG1045	serine acetyltransferase
ATCC27039_13990	COG3590	peptidase
ATCC27039_14040	COG1263	PTS System
ATCC27039_14050	COG2188	Transcriptional regulator
ATCC27039_14060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ATCC27039_14090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ATCC27039_14100	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ATCC27039_14190	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ATCC27039_14300	COG0110	maltose O-acetyltransferase activity
ATCC27039_14320	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ATCC27039_14330	COG2326	polyphosphate kinase activity
ATCC27039_14340	COG1615	UPF0182 protein
ATCC27039_14380	COG3480	Lon protease (S16) C-terminal proteolytic domain
ATCC27039_14530	COG3547	Transposase (IS116 IS110 IS902 family)
ATCC27039_14540	COG3547	Transposase (IS116 IS110 IS902 family)
ATCC27039_14630	COG0482	sulfurtransferase activity
ATCC27039_14670	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ATCC27039_14680	COG2086	electron transfer activity
ATCC27039_14720	COG0366	Alpha amylase catalytic
ATCC27039_14750	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ATCC27039_14760	COG0058	SHG alpha-glucan phosphorylase activity
ATCC27039_14830	COG0395	ABC-type sugar transport system, permease component
ATCC27039_14840	COG1175	transmembrane transport
ATCC27039_14860	COG0039	L-malate dehydrogenase activity
ATCC27039_14890	COG1132	(ABC) transporter
ATCC27039_14900	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ATCC27039_14970	COG0045	succinate-CoA ligase (ADP-forming) activity
ATCC27039_15000	COG0205	6-phosphofructokinase activity
ATCC27039_15050	COG0366	Alpha amylase catalytic
ATCC27039_15060	COG1501	Belongs to the glycosyl hydrolase 31 family
ATCC27039_15070	COG0110	maltose O-acetyltransferase activity
ATCC27039_15110	COG0693	protein deglycase activity
ATCC27039_15170	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ATCC27039_15180	COG0254	rRNA binding
ATCC27039_15210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATCC27039_15220	COG0083	homoserine kinase activity
ATCC27039_15230	COG0460	homoserine dehydrogenase
ATCC27039_15270	COG0019	diaminopimelate decarboxylase activity
ATCC27039_15280	COG0018	arginyl-trna synthetase
ATCC27039_15300	COG0739	heme binding
ATCC27039_15320	COG1253	flavin adenine dinucleotide binding
ATCC27039_15330	COG0731	radical SAM domain protein
ATCC27039_15350	COG0567	Dehydrogenase, E1 component
ATCC27039_15350	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATCC27039_15390	COG1595	DNA-templated transcription, initiation
ATCC27039_15420	COG2838	Isocitrate dehydrogenase
ATCC27039_15430	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ATCC27039_15440	COG1162	GTPase activity
ATCC27039_15500	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ATCC27039_15520	COG0314	molybdopterin synthase activity
ATCC27039_15540	COG0315	cyclic pyranopterin monophosphate synthase activity
ATCC27039_15560	COG0315	cyclic pyranopterin monophosphate synthase activity
ATCC27039_15560	COG0521	Mo-molybdopterin cofactor biosynthetic process
ATCC27039_15590	COG1140	nitrate reductase beta subunit
ATCC27039_15640	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ATCC27039_15670	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ATCC27039_15680	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ATCC27039_15700	COG1120	ATPase activity
ATCC27039_15720	COG2249	NAD(P)H dehydrogenase (quinone) activity
ATCC27039_15730	COG0456	acetyltransferase
ATCC27039_15740	COG2249	NAD(P)H dehydrogenase (quinone) activity
ATCC27039_15750	COG0483	inositol monophosphate 1-phosphatase activity
ATCC27039_15770	COG1968	undecaprenyl-diphosphatase activity
ATCC27039_15800	COG0420	3'-5' exonuclease activity
ATCC27039_15810	COG0419	ATPase involved in DNA repair
ATCC27039_15870	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ATCC27039_15880	COG0085	RNA polymerase activity
ATCC27039_15920	COG0222	ribosome binding
ATCC27039_15930	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ATCC27039_16010	COG0653	protein targeting
ATCC27039_16030	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ATCC27039_16040	COG5401	PFAM Sporulation and spore germination
ATCC27039_16050	COG5000	phosphorelay sensor kinase activity
ATCC27039_16050	COG5002	protein histidine kinase activity
ATCC27039_16060	COG0745	RESPONSE REGULATOR receiver
ATCC27039_16100	COG0714	Associated with various cellular activities
ATCC27039_16110	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
ATCC27039_16140	COG2835	tetraacyldisaccharide 4'-kinase activity
ATCC27039_16210	COG1482	cell wall glycoprotein biosynthetic process
ATCC27039_16290	COG1215	transferase activity, transferring glycosyl groups
ATCC27039_16410	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ATCC27039_16430	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ATCC27039_16460	COG0297	glycogen (starch) synthase activity
ATCC27039_16500	COG0438	transferase activity, transferring glycosyl groups
ATCC27039_16510	COG0438	transferase activity, transferring glycosyl groups
ATCC27039_16600	COG1316	TRANSCRIPTIONal
ATCC27039_16690	COG5002	protein histidine kinase activity
ATCC27039_16700	COG0745	RESPONSE REGULATOR receiver
ATCC27039_16730	COG0424	maF-like protein
ATCC27039_16750	COG2030	dehydratase
ATCC27039_16760	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ATCC27039_16770	COG1666	GTP binding
ATCC27039_16780	COG2197	response regulator
ATCC27039_16840	COG0501	Belongs to the peptidase M48B family
ATCC27039_16860	COG0686	Belongs to the AlaDH PNT family
ATCC27039_16880	COG2885	chlorophyll binding
ATCC27039_16890	COG0142	geranyltranstransferase activity
ATCC27039_16920	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATCC27039_16930	COG0713	ATP synthesis coupled electron transport
ATCC27039_16960	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ATCC27039_16970	COG1034	ATP synthesis coupled electron transport
ATCC27039_16980	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ATCC27039_17000	COG0649	NAD binding
ATCC27039_17020	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATCC27039_17030	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATCC27039_17050	COG0644	oxidoreductase
ATCC27039_17060	COG2226	methyltransferase
ATCC27039_17070	COG1169	isochorismate synthase
ATCC27039_17080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATCC27039_17090	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
ATCC27039_17100	COG4948	Mandelate Racemase Muconate Lactonizing
ATCC27039_17140	COG4176	ABC-type proline glycine betaine transport system permease component
ATCC27039_17160	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ATCC27039_17170	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ATCC27039_17200	COG2197	response regulator
ATCC27039_17210	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ATCC27039_17260	COG3477	response to acidic pH
ATCC27039_17280	COG1397	ADP-ribosylglycohydrolase
ATCC27039_17290	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATCC27039_17330	COG0406	alpha-ribazole phosphatase activity
ATCC27039_17340	COG2171	N-acyltransferase activity
ATCC27039_17390	COG1053	succinate dehydrogenase
ATCC27039_17430	COG2814	Major facilitator Superfamily
ATCC27039_17510	COG1217	gtp-binding protein TYPA
ATCC27039_17540	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ATCC27039_17550	COG0601	transmembrane transport
ATCC27039_17570	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATCC27039_17590	COG2267	carboxylic ester hydrolase activity
ATCC27039_17620	COG1902	pentaerythritol trinitrate reductase activity
ATCC27039_17630	COG1733	regulation of RNA biosynthetic process
ATCC27039_17640	COG0604	alcohol dehydrogenase
ATCC27039_17650	COG3012	SEC-C Motif Domain Protein
ATCC27039_17660	COG1362	aminopeptidase activity
ATCC27039_17670	COG0546	phosphoglycolate phosphatase activity
ATCC27039_17700	COG0501	Belongs to the peptidase M48B family
ATCC27039_17900	COG0698	ribose 5-phosphate isomerase
ATCC27039_17920	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ATCC27039_17980	COG1733	regulation of RNA biosynthetic process
ATCC27039_18000	COG3549	Plasmid maintenance system killer
ATCC27039_18120	COG0563	adenylate kinase activity
ATCC27039_18140	COG0012	GTP binding
ATCC27039_18160	COG1322	Protein conserved in bacteria
ATCC27039_18180	COG1302	Protein conserved in bacteria
ATCC27039_18230	COG1595	DNA-templated transcription, initiation
ATCC27039_18260	COG0833	amino acid
ATCC27039_18280	COG1570	exodeoxyribonuclease VII activity
ATCC27039_18310	COG1722	exodeoxyribonuclease VII activity
ATCC27039_18350	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ATCC27039_18400	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ATCC27039_18420	COG1472	Belongs to the glycosyl hydrolase 3 family
ATCC27039_18440	COG1136	(ABC) transporter
ATCC27039_18450	COG0577	efflux transmembrane transporter activity
ATCC27039_18470	COG1132	(ABC) transporter
ATCC27039_18480	COG1132	(ABC) transporter
ATCC27039_18530	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ATCC27039_18580	COG1201	RNA secondary structure unwinding
ATCC27039_18590	COG3973	AAA domain
ATCC27039_18610	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ATCC27039_18630	COG0557	exoribonuclease II activity
ATCC27039_18650	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATCC27039_18650	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ATCC27039_18650	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATCC27039_18670	COG1349	DNA-binding transcription factor activity
ATCC27039_18680	COG0737	Belongs to the 5'-nucleotidase family
ATCC27039_18690	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ATCC27039_18710	COG1090	epimerase
ATCC27039_18770	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ATCC27039_18830	COG0047	phosphoribosylformylglycinamidine synthase activity
ATCC27039_18870	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ATCC27039_18880	COG0151	Belongs to the GarS family
ATCC27039_18990	COG2132	Multicopper oxidase
ATCC27039_19000	COG2205	protein histidine kinase activity
ATCC27039_19010	COG0745	RESPONSE REGULATOR receiver
ATCC27039_19030	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
ATCC27039_19100	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ATCC27039_19160	COG0191	fructose-bisphosphate aldolase activity
ATCC27039_19180	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ATCC27039_19190	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ATCC27039_19200	COG1028	Short-chain dehydrogenase reductase Sdr
ATCC27039_19270	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ATCC27039_19280	COG2176	DNA-directed DNA polymerase activity
ATCC27039_19300	COG0717	Belongs to the dCTP deaminase family
ATCC27039_19420	COG0714	Associated with various cellular activities
ATCC27039_19530	COG2860	membrane
ATCC27039_19540	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ATCC27039_19570	COG1643	Atp-dependent helicase
ATCC27039_19580	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATCC27039_19620	COG1609	Transcriptional regulator
ATCC27039_19640	COG2814	Major facilitator Superfamily
ATCC27039_19660	COG1070	Carbohydrate kinase
ATCC27039_19700	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ATCC27039_19720	COG0745	RESPONSE REGULATOR receiver
ATCC27039_19730	COG5002	protein histidine kinase activity
ATCC27039_19780	COG1113	amino acid transport
ATCC27039_19790	COG0252	asparaginase activity
ATCC27039_19840	COG0470	DNA polymerase III
ATCC27039_19850	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ATCC27039_19910	COG2188	Transcriptional regulator
ATCC27039_19950	COG0745	RESPONSE REGULATOR receiver
ATCC27039_19970	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ATCC27039_19970	COG1754	DNA topoisomerase type I activity
ATCC27039_20000	COG0745	RESPONSE REGULATOR receiver
ATCC27039_20010	COG2205	protein histidine kinase activity
ATCC27039_20090	COG2890	protein-(glutamine-N5) methyltransferase activity
ATCC27039_20100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATCC27039_20110	COG0450	alkyl hydroperoxide reductase
ATCC27039_20210	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ATCC27039_20230	COG3548	integral membrane protein
ATCC27039_20240	COG2267	carboxylic ester hydrolase activity
ATCC27039_20260	COG1136	(ABC) transporter
ATCC27039_20310	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ATCC27039_20320	COG1408	metallophosphoesterase
ATCC27039_20330	COG1028	Short-chain dehydrogenase reductase Sdr
ATCC27039_20360	COG1597	lipid kinase activity
ATCC27039_20400	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ATCC27039_20400	COG1918	ferrous iron import across plasma membrane
ATCC27039_20480	COG2207	Transcriptional regulator
ATCC27039_20480	COG3708	Transcriptional regulator
ATCC27039_20510	COG0783	Belongs to the Dps family
ATCC27039_20530	COG0783	Belongs to the Dps family
ATCC27039_20540	COG3253	May function as heme-dependent peroxidase
ATCC27039_20540	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ATCC27039_20550	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ATCC27039_20560	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ATCC27039_20570	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ATCC27039_20590	COG0181	hydroxymethylbilane synthase activity
ATCC27039_20610	COG0113	porphobilinogen synthase activity
ATCC27039_20620	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ATCC27039_20640	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATCC27039_20700	COG2140	Oxalate decarboxylase
ATCC27039_20730	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATCC27039_20810	COG1131	(ABC) transporter
ATCC27039_20820	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ATCC27039_20950	COG2233	PERMEase
ATCC27039_21330	COG0702	epimerase
ATCC27039_21350	COG2801	Transposase and inactivated derivatives
ATCC27039_21440	COG1131	(ABC) transporter
ATCC27039_21450	COG1132	(ABC) transporter
ATCC27039_21540	COG1643	Atp-dependent helicase
ATCC27039_21560	COG0590	tRNA wobble adenosine to inosine editing
ATCC27039_21560	COG0037	tRNA processing
ATCC27039_21580	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ATCC27039_21590	COG0656	L-ascorbic acid biosynthetic process
ATCC27039_21610	COG0577	efflux transmembrane transporter activity
ATCC27039_21610	COG1136	(ABC) transporter
ATCC27039_21640	COG2197	response regulator
ATCC27039_21650	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ATCC27039_21720	COG4585	Histidine kinase
ATCC27039_21740	COG3311	Transcriptional regulator
ATCC27039_21760	COG0577	efflux transmembrane transporter activity
ATCC27039_21760	COG1136	(ABC) transporter
ATCC27039_21780	COG2205	protein histidine kinase activity
ATCC27039_21800	COG1929	Belongs to the glycerate kinase type-1 family
ATCC27039_21810	COG1464	Belongs to the NlpA lipoprotein family
ATCC27039_21820	COG2011	ABC-type metal ion transport system permease component
ATCC27039_21850	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ATCC27039_21890	COG0463	Glycosyl transferase, family 2
ATCC27039_21960	COG1309	transcriptional regulator
ATCC27039_21970	COG2249	NAD(P)H dehydrogenase (quinone) activity
ATCC27039_21990	COG3739	integral membrane protein
ATCC27039_22150	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ATCC27039_22160	COG1950	PFAM Membrane protein of
ATCC27039_22200	COG3579	cysteine-type endopeptidase activity
ATCC27039_22250	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ATCC27039_22360	COG2197	response regulator
ATCC27039_22380	COG1937	Protein conserved in bacteria
ATCC27039_22410	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ATCC27039_22420	COG0626	cystathionine gamma-synthase activity
ATCC27039_22650	COG1653	transport
ATCC27039_22660	COG0561	phosphatase activity
ATCC27039_22670	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ATCC27039_22710	COG1309	transcriptional regulator
ATCC27039_22720	COG2814	Major facilitator Superfamily
ATCC27039_22730	COG2837	iron assimilation
ATCC27039_22750	COG0672	)-iron permease
ATCC27039_22760	COG2211	Major facilitator Superfamily
ATCC27039_22780	COG1609	Transcriptional regulator
ATCC27039_22820	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATCC27039_22830	COG1309	transcriptional regulator
ATCC27039_22850	COG1129	ABC transporter
ATCC27039_22850	COG0842	Transport permease protein
ATCC27039_22870	COG0477	Major facilitator Superfamily
ATCC27039_22910	COG2801	Transposase and inactivated derivatives
ATCC27039_22940	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ATCC27039_22950	COG1780	Probably involved in ribonucleotide reductase function
ATCC27039_23020	COG1760	l-serine dehydratase
ATCC27039_23040	COG1733	regulation of RNA biosynthetic process
ATCC27039_23070	COG1196	nuclear chromosome segregation
ATCC27039_23110	COG0351	phosphomethylpyrimidine kinase
ATCC27039_23130	COG1121	(ABC) transporter
ATCC27039_23150	COG0305	Participates in initiation and elongation during chromosome replication
ATCC27039_23160	COG0534	Mate efflux family protein
ATCC27039_23180	COG0359	binds to the 23S rRNA
ATCC27039_23190	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ATCC27039_23210	COG0360	Binds together with S18 to 16S ribosomal RNA
ATCC27039_23220	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ATCC27039_23240	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ATCC27039_23280	COG3764	Sortase (surface protein transpeptidase)
ATCC27039_23330	COG0656	L-ascorbic acid biosynthetic process
ATCC27039_23420	COG3321	synthase
ATCC27039_23420	COG4221	oxidoreductase activity
ATCC27039_23420	COG0604	alcohol dehydrogenase
ATCC27039_23420	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ATCC27039_23440	COG1476	TRANSCRIPTIONal
ATCC27039_23490	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ATCC27039_23500	COG0187	DNA topoisomerase II activity
ATCC27039_23510	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
ATCC27039_23520	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ATCC27039_23530	COG0592	DNA-directed DNA polymerase activity
ATCC27039_23540	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ATCC27039_23550	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ATCC27039_23560	COG0594	ribonuclease P activity
ATCC27039_23570	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ATCC27039_23580	COG0706	membrane insertase activity
ATCC27039_23600	COG0357	Ribosomal RNA small subunit methyltransferase G
ATCC27039_23610	COG1192	Involved in chromosome partitioning
ATCC27039_23640	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATCC27039_23650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ATCC27039_23670	COG3118	belongs to the thioredoxin family
ATCC27039_23680	COG0492	ferredoxin-NADP+ reductase activity
ATCC27039_23690	COG0728	peptidoglycan biosynthetic process
ATCC27039_23720	COG0617	tRNA 3'-terminal CCA addition
ATCC27039_23730	COG0673	inositol 2-dehydrogenase activity
ATCC27039_23740	COG3345	alpha-galactosidase
ATCC27039_23760	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ATCC27039_23770	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ATCC27039_23790	COG4585	Histidine kinase
ATCC27039_23800	COG2197	response regulator
ATCC27039_23820	COG0515	serine threonine protein kinase
ATCC27039_23830	COG0768	penicillin binding
ATCC27039_23860	COG1716	ATPase activity
ATCC27039_23870	COG1716	ATPase activity
ATCC27039_23900	COG1966	Carbon starvation protein
ATCC27039_23930	COG2985	domain, Protein
ATCC27039_23930	COG0569	domain protein
ATCC27039_23940	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ATCC27039_23950	COG0789	Transcriptional regulator
ATCC27039_23990	COG1733	regulation of RNA biosynthetic process
ATCC27039_24020	COG1854	S-ribosylhomocysteine lyase activity
ATCC27039_24040	COG0628	permease
ATCC27039_24060	COG1940	carbohydrate kinase activity
ATCC27039_24070	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ATCC27039_24070	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ATCC27039_24080	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ATCC27039_24090	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ATCC27039_24110	COG1113	amino acid transport
ATCC27039_24120	COG0483	inositol monophosphate 1-phosphatase activity
ATCC27039_24140	COG2755	lipolytic protein G-D-S-L family
ATCC27039_24150	COG2755	lipolytic protein G-D-S-L family
ATCC27039_24160	COG3547	Transposase (IS116 IS110 IS902 family)
ATCC27039_24180	COG2197	response regulator
ATCC27039_24240	COG2197	response regulator
ATCC27039_24250	COG4585	Histidine kinase
ATCC27039_24350	COG4585	Histidine kinase
ATCC27039_24360	COG2197	response regulator
ATCC27039_24390	COG1309	transcriptional regulator
ATCC27039_24440	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ATCC27039_24450	COG2181	nitrate reductase activity
ATCC27039_24450	COG0247	lactate metabolic process
ATCC27039_24500	COG1733	regulation of RNA biosynthetic process
ATCC27039_24540	COG3842	ATPase activity
ATCC27039_24700	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ATCC27039_24780	COG4585	Histidine kinase
ATCC27039_24790	COG2197	response regulator
ATCC27039_24830	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ATCC27039_24930	COG1848	Toxic component of a toxin-antitoxin (TA) module. An RNase
ATCC27039_24940	COG0778	Nitroreductase
ATCC27039_25070	COG1131	(ABC) transporter
ATCC27039_25080	COG4585	Histidine kinase
ATCC27039_25090	COG2197	response regulator
ATCC27039_25140	COG1131	(ABC) transporter
ATCC27039_25170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ATCC27039_25180	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ATCC27039_25190	COG2814	Major facilitator Superfamily
ATCC27039_25230	COG0443	Heat shock 70 kDa protein
ATCC27039_25240	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ATCC27039_25250	COG0484	heat shock protein binding
ATCC27039_25260	COG0789	Transcriptional regulator
ATCC27039_25320	COG2205	protein histidine kinase activity
ATCC27039_25330	COG0745	RESPONSE REGULATOR receiver
ATCC27039_25370	COG0577	efflux transmembrane transporter activity
ATCC27039_25370	COG1136	(ABC) transporter
ATCC27039_25400	COG3655	Transcriptional regulator
ATCC27039_25430	COG0542	response to heat
ATCC27039_25460	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ATCC27039_25470	COG1609	Transcriptional regulator
ATCC27039_25480	COG1621	beta-fructofuranosidase activity
ATCC27039_25510	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATCC27039_25520	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ATCC27039_25520	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ATCC27039_25530	COG3715	PTS system
ATCC27039_25540	COG3716	PTS system mannose fructose sorbose family IID component
ATCC27039_25580	COG0561	phosphatase activity
ATCC27039_25620	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ATCC27039_25700	COG3842	ATPase activity
ATCC27039_25760	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATCC27039_25770	COG0215	cysteine-tRNA ligase activity
ATCC27039_25780	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ATCC27039_25790	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ATCC27039_25840	COG2205	protein histidine kinase activity
ATCC27039_25850	COG0745	RESPONSE REGULATOR receiver
ATCC27039_25870	COG1842	Phage shock protein A
ATCC27039_25900	COG1061	Type III restriction enzyme res subunit
ATCC27039_25940	COG1201	RNA secondary structure unwinding
ATCC27039_25950	COG2252	PERMEase
ATCC27039_26080	COG2211	Major facilitator Superfamily
ATCC27039_26100	COG3103	Sh3 type 3 domain protein
ATCC27039_26100	COG1388	LysM domain
ATCC27039_26100	COG0791	NLP P60 protein
ATCC27039_26140	COG1970	mechanosensitive ion channel activity
ATCC27039_26160	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ATCC27039_26220	COG1136	(ABC) transporter
ATCC27039_26220	COG0577	efflux transmembrane transporter activity
ATCC27039_26250	COG0789	Transcriptional regulator
ATCC27039_26300	COG0640	Transcriptional regulator
ATCC27039_26310	COG2814	Major facilitator Superfamily
ATCC27039_26330	COG1733	regulation of RNA biosynthetic process
ATCC27039_26350	COG1297	OPT oligopeptide transporter protein
ATCC27039_26400	COG2197	response regulator
ATCC27039_26460	COG1335	isochorismatase
ATCC27039_26480	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATCC27039_26490	COG0084	hydrolase, TatD family'
ATCC27039_26520	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ATCC27039_26530	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ATCC27039_26540	COG0488	(ABC) transporter
ATCC27039_26630	COG0714	Associated with various cellular activities
ATCC27039_26650	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ATCC27039_26650	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ATCC27039_26660	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ATCC27039_26810	COG1309	transcriptional regulator
ATCC27039_26830	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ATCC27039_26890	COG4592	Periplasmic binding protein
ATCC27039_26910	COG0148	phosphopyruvate hydratase activity
ATCC27039_26990	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ATCC27039_27000	COG0193	aminoacyl-tRNA hydrolase activity
ATCC27039_27010	COG2197	response regulator
ATCC27039_27020	COG4585	Histidine kinase
ATCC27039_27040	COG1131	(ABC) transporter
ATCC27039_27080	COG1619	proteins homologs of microcin C7 resistance protein MccF
ATCC27039_27110	COG0129	dihydroxy-acid dehydratase activity
ATCC27039_27150	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ATCC27039_27170	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ATCC27039_27180	COG0431	NADPH-dependent FMN reductase
ATCC27039_27230	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ATCC27039_27270	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATCC27039_27300	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ATCC27039_27320	COG3265	gluconokinase activity