locus-tag class description PGE45_00005 PF13614 AAA domain PGE45_00010 PF02527 rRNA small subunit methyltransferase G PGE45_00020 PF02096 60Kd inner membrane protein PGE45_00025 PF01809 Putative membrane protein insertion efficiency factor PGE45_00030 PF00825 Ribonuclease P PGE45_00035 PF00468 Ribosomal protein L34 PGE45_00040 PF00308 Bacterial dnaA protein PGE45_00040 PF08299 Bacterial dnaA protein helix-turn-helix PGE45_00045 PF02768 DNA polymerase III beta subunit, C-terminal domain PGE45_00045 PF02767 DNA polymerase III beta subunit, central domain PGE45_00045 PF00712 DNA polymerase III beta subunit, N-terminal domain PGE45_00050 PF02463 RecF/RecN/SMC N terminal domain PGE45_00055 PF05258 Dna[CI] antecedent, DciA PGE45_00060 PF00204 DNA gyrase B PGE45_00060 PF00986 DNA gyrase B subunit, carboxyl terminus PGE45_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_00060 PF01751 Toprim domain PGE45_00065 PF03989 DNA gyrase C-terminal domain, beta-propeller PGE45_00065 PF00521 DNA gyrase/topoisomerase IV, subunit A PGE45_00070 PF12089 Transmembrane domain of unknown function (DUF3566) PGE45_00100 PF01381 Helix-turn-helix PGE45_00110 PF08240 Alcohol dehydrogenase GroES-like domain PGE45_00110 PF00107 Zinc-binding dehydrogenase PGE45_00130 PF00005 ABC transporter PGE45_00160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PGE45_00165 PF01694 Rhomboid family PGE45_00175 PF04203 Sortase domain PGE45_00190 PF03605 Anaerobic c4-dicarboxylate membrane transporter PGE45_00195 PF00905 Penicillin binding protein transpeptidase domain PGE45_00195 PF00912 Transglycosylase PGE45_00200 PF01250 Ribosomal protein S6 PGE45_00205 PF00436 Single-strand binding protein family PGE45_00210 PF01084 Ribosomal protein S18 PGE45_00215 PF03948 Ribosomal protein L9, C-terminal domain PGE45_00215 PF01281 Ribosomal protein L9, N-terminal domain PGE45_00225 PF01554 MatE PGE45_00230 PF03796 DnaB-like helicase C terminal domain PGE45_00230 PF00772 DnaB-like helicase N terminal domain PGE45_00240 PF00005 ABC transporter PGE45_00250 PF08543 Phosphomethylpyrimidine kinase PGE45_00255 PF13460 NAD(P)H-binding PGE45_00260 PF01638 HxlR-like helix-turn-helix PGE45_00265 PF00128 Alpha amylase, catalytic domain PGE45_00270 PF03315 Serine dehydratase beta chain PGE45_00270 PF03313 Serine dehydratase alpha chain PGE45_00310 PF07972 NrdI Flavodoxin like PGE45_00315 PF02867 Ribonucleotide reductase, barrel domain PGE45_00315 PF00317 Ribonucleotide reductase, all-alpha domain PGE45_00315 PF08343 Ribonucleotide reductase N-terminal PGE45_00325 PF01758 Sodium Bile acid symporter family PGE45_00330 PF00485 Phosphoribulokinase / Uridine kinase family PGE45_00355 PF00268 Ribonucleotide reductase, small chain PGE45_00375 PF00356 Bacterial regulatory proteins, lacI family PGE45_00380 PF02929 Beta galactosidase small chain PGE45_00380 PF16353 Domain of unknown function(DUF4981) PGE45_00380 PF00703 Glycosyl hydrolases family 2 PGE45_00380 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PGE45_00380 PF02837 Glycosyl hydrolases family 2, sugar binding domain PGE45_00400 PF03466 LysR substrate binding domain PGE45_00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PGE45_00405 PF02403 Seryl-tRNA synthetase N-terminal domain PGE45_00405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PGE45_00415 PF01547 Bacterial extracellular solute-binding protein PGE45_00460 PF00561 alpha/beta hydrolase fold PGE45_00465 PF01053 Cys/Met metabolism PLP-dependent enzyme PGE45_00470 PF00155 Aminotransferase class I and II PGE45_00475 PF00403 Heavy-metal-associated domain PGE45_00480 PF00403 Heavy-metal-associated domain PGE45_00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGE45_00480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PGE45_00485 PF02583 Metal-sensitive transcriptional repressor PGE45_00495 PF00072 Response regulator receiver domain PGE45_00495 PF00196 Bacterial regulatory proteins, luxR family PGE45_00540 PF00206 Lyase PGE45_00540 PF08328 Adenylosuccinate lyase C-terminal PGE45_00565 PF08021 Siderophore-interacting FAD-binding domain PGE45_00565 PF04954 Siderophore-interacting protein PGE45_00565 PF00005 ABC transporter PGE45_00565 PF00664 ABC transporter transmembrane region PGE45_00570 PF00145 C-5 cytosine-specific DNA methylase PGE45_00585 PF01119 DNA mismatch repair protein, C-terminal domain PGE45_00585 PF08676 MutL C terminal dimerisation domain PGE45_00600 PF03852 DNA mismatch endonuclease Vsr PGE45_00605 PF03051 Peptidase C1-like family PGE45_00610 PF08468 Methyltransferase small domain N-terminal PGE45_00610 PF05175 Methyltransferase small domain PGE45_00630 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV PGE45_00635 PF00155 Aminotransferase class I and II PGE45_00655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGE45_00655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGE45_00655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGE45_00655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGE45_00665 PF01042 Endoribonuclease L-PSP PGE45_00735 PF00535 Glycosyl transferase family 2 PGE45_00750 PF01842 ACT domain PGE45_00750 PF00800 Prephenate dehydratase PGE45_00755 PF01451 Low molecular weight phosphotyrosine protein phosphatase PGE45_00765 PF00005 ABC transporter PGE45_00765 PF09383 NIL domain PGE45_00770 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_00775 PF03180 NLPA lipoprotein PGE45_00780 PF12728 Helix-turn-helix domain PGE45_00810 PF00176 SNF2 family N-terminal domain PGE45_00810 PF00271 Helicase conserved C-terminal domain PGE45_00815 PF04851 Type III restriction enzyme, res subunit PGE45_00815 PF08774 VRR-NUC domain PGE45_00820 PF01555 DNA methylase PGE45_00820 PF18273 Type III R-M EcoP15I C-terminal domain PGE45_00830 PF00005 ABC transporter PGE45_00830 PF02687 FtsX-like permease family PGE45_00830 PF12704 MacB-like periplasmic core domain PGE45_00840 PF07730 Histidine kinase PGE45_00845 PF00072 Response regulator receiver domain PGE45_00845 PF00196 Bacterial regulatory proteins, luxR family PGE45_00865 PF00072 Response regulator receiver domain PGE45_00865 PF00196 Bacterial regulatory proteins, luxR family PGE45_00870 PF13492 GAF domain PGE45_00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_00870 PF07730 Histidine kinase PGE45_00880 PF00005 ABC transporter PGE45_00880 PF12704 MacB-like periplasmic core domain PGE45_00880 PF02687 FtsX-like permease family PGE45_00890 PF00248 Aldo/keto reductase family PGE45_00895 PF02028 BCCT, betaine/carnitine/choline family transporter PGE45_00900 PF11734 TilS substrate C-terminal domain PGE45_00900 PF01171 PP-loop family PGE45_00900 PF14437 MafB19-like deaminase PGE45_00915 PF00270 DEAD/DEAH box helicase PGE45_00915 PF04408 Helicase associated domain (HA2) PGE45_00915 PF00271 Helicase conserved C-terminal domain PGE45_00915 PF08482 ATP-dependent helicase C-terminal PGE45_00980 PF00860 Permease family PGE45_01025 PF00484 Carbonic anhydrase PGE45_01030 PF12169 DNA polymerase III subunits gamma and tau domain III PGE45_01035 PF13662 Toprim domain PGE45_01035 PF02132 RecR protein PGE45_01045 PF13732 Domain of unknown function (DUF4162) PGE45_01045 PF00005 ABC transporter PGE45_01050 PF13840 ACT domain PGE45_01050 PF01842 ACT domain PGE45_01050 PF00696 Amino acid kinase family PGE45_01055 PF02774 Semialdehyde dehydrogenase, dimerisation domain PGE45_01055 PF01118 Semialdehyde dehydrogenase, NAD binding domain PGE45_01085 PF07885 Ion channel PGE45_01085 PF00027 Cyclic nucleotide-binding domain PGE45_01100 PF13784 Fic/DOC family N-terminal PGE45_01100 PF02661 Fic/DOC family PGE45_01110 PF00085 Thioredoxin PGE45_01115 PF01661 Macro domain PGE45_01120 PF00202 Aminotransferase class-III PGE45_01125 PF00490 Delta-aminolevulinic acid dehydratase PGE45_01135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PGE45_01135 PF03900 Porphobilinogen deaminase, C-terminal domain PGE45_01140 PF01593 Flavin containing amine oxidoreductase PGE45_01145 PF01208 Uroporphyrinogen decarboxylase (URO-D) PGE45_01150 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PGE45_01150 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PGE45_01150 PF01488 Shikimate / quinate 5-dehydrogenase PGE45_01155 PF00762 Ferrochelatase PGE45_01160 PF06778 Chlorite dismutase PGE45_01160 PF00762 Ferrochelatase PGE45_01180 PF00210 Ferritin-like domain PGE45_01190 PF00128 Alpha amylase, catalytic domain PGE45_01190 PF00686 Starch binding domain PGE45_01190 PF01833 IPT/TIG domain PGE45_01205 PF06445 GyrI-like small molecule binding domain PGE45_01205 PF12833 Helix-turn-helix domain PGE45_01225 PF07670 Nucleoside recognition PGE45_01225 PF02421 Ferrous iron transport protein B PGE45_01225 PF07664 Ferrous iron transport protein B C terminus PGE45_01230 PF07664 Ferrous iron transport protein B C terminus PGE45_01230 PF17910 FeoB cytosolic helical domain PGE45_01230 PF07670 Nucleoside recognition PGE45_01230 PF04023 FeoA domain PGE45_01230 PF02421 Ferrous iron transport protein B PGE45_01240 PF07664 Ferrous iron transport protein B C terminus PGE45_01240 PF07670 Nucleoside recognition PGE45_01240 PF02421 Ferrous iron transport protein B PGE45_01245 PF07664 Ferrous iron transport protein B C terminus PGE45_01245 PF17910 FeoB cytosolic helical domain PGE45_01245 PF02421 Ferrous iron transport protein B PGE45_01245 PF07670 Nucleoside recognition PGE45_01245 PF04023 FeoA domain PGE45_01255 PF07685 CobB/CobQ-like glutamine amidotransferase domain PGE45_01260 PF08353 Domain of unknown function (DUF1727) PGE45_01260 PF08245 Mur ligase middle domain PGE45_01265 PF00781 Diacylglycerol kinase catalytic domain PGE45_01285 PF01661 Macro domain PGE45_01295 PF00149 Calcineurin-like phosphoesterase PGE45_01300 PF00905 Penicillin binding protein transpeptidase domain PGE45_01300 PF00912 Transglycosylase PGE45_01305 PF02467 Transcription factor WhiB PGE45_01315 PF00027 Cyclic nucleotide-binding domain PGE45_01315 PF13545 Crp-like helix-turn-helix domain PGE45_01320 PF10576 Iron-sulfur binding domain of endonuclease III PGE45_01320 PF00730 HhH-GPD superfamily base excision DNA repair protein PGE45_01320 PF00633 Helix-hairpin-helix motif PGE45_01325 PF00005 ABC transporter PGE45_01335 PF00561 alpha/beta hydrolase fold PGE45_01340 PF06736 Protein of unknown function (DUF1211) PGE45_01350 PF03591 AzlC protein PGE45_01380 PF00437 Type II/IV secretion system protein PGE45_01395 PF02627 Carboxymuconolactone decarboxylase family PGE45_01400 PF00578 AhpC/TSA family PGE45_01405 PF00296 Luciferase-like monooxygenase PGE45_01410 PF17827 PrmC N-terminal domain PGE45_01410 PF05175 Methyltransferase small domain PGE45_01420 PF16555 Gram-positive pilin subunit D1, N-terminal domain PGE45_01420 PF00746 LPXTG cell wall anchor motif PGE45_01435 PF00672 HAMP domain PGE45_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_01435 PF00512 His Kinase A (phospho-acceptor) domain PGE45_01440 PF00486 Transcriptional regulatory protein, C terminal PGE45_01440 PF00072 Response regulator receiver domain PGE45_01455 PF01751 Toprim domain PGE45_01455 PF01131 DNA topoisomerase PGE45_01455 PF13368 Topoisomerase C-terminal repeat PGE45_01465 PF00072 Response regulator receiver domain PGE45_01465 PF00486 Transcriptional regulatory protein, C terminal PGE45_01470 PF00672 HAMP domain PGE45_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_01470 PF18698 Histidine kinase sensor domain PGE45_01470 PF00989 PAS fold PGE45_01470 PF00512 His Kinase A (phospho-acceptor) domain PGE45_01475 PF00223 Photosystem I psaA/psaB protein PGE45_01475 PF00691 OmpA family PGE45_01485 PF00392 Bacterial regulatory proteins, gntR family PGE45_01485 PF07702 UTRA domain PGE45_01490 PF00005 ABC transporter PGE45_01510 PF02223 Thymidylate kinase PGE45_01515 PF09115 DNA polymerase III, delta subunit, C terminal PGE45_01525 PF00561 alpha/beta hydrolase fold PGE45_01530 PF00561 alpha/beta hydrolase fold PGE45_01535 PF00561 alpha/beta hydrolase fold PGE45_01540 PF17763 Glutaminase/Asparaginase C-terminal domain PGE45_01540 PF00710 Asparaginase, N-terminal PGE45_01545 PF00324 Amino acid permease PGE45_01560 PF00300 Histidine phosphatase superfamily (branch 1) PGE45_01565 PF01895 PhoU domain PGE45_01570 PF00512 His Kinase A (phospho-acceptor) domain PGE45_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_01575 PF00486 Transcriptional regulatory protein, C terminal PGE45_01575 PF00072 Response regulator receiver domain PGE45_01580 PF02559 CarD-like/TRCF domain PGE45_01585 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PGE45_01600 PF01906 Putative heavy-metal-binding PGE45_01615 PF13396 Phospholipase_D-nuclease N-terminal PGE45_01615 PF13091 PLD-like domain PGE45_01630 PF04408 Helicase associated domain (HA2) PGE45_01630 PF00271 Helicase conserved C-terminal domain PGE45_01630 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PGE45_01630 PF00270 DEAD/DEAH box helicase PGE45_01630 PF11898 Domain of unknown function (DUF3418) PGE45_01645 PF03932 CutC family PGE45_01650 PF01545 Cation efflux family PGE45_01650 PF16916 Dimerisation domain of Zinc Transporter PGE45_01655 PF03458 UPF0126 domain PGE45_01685 PF09594 Glycosyltransferase family 87 PGE45_01725 PF17863 AAA lid domain PGE45_01725 PF07726 ATPase family associated with various cellular activities (AAA) PGE45_01755 PF00293 NUDIX domain PGE45_01790 PF00692 dUTPase PGE45_01800 PF00929 Exonuclease PGE45_01800 PF07733 Bacterial DNA polymerase III alpha NTPase domain PGE45_01800 PF14579 Helix-hairpin-helix motif PGE45_01800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PGE45_01800 PF02811 PHP domain PGE45_01815 PF00106 short chain dehydrogenase PGE45_01820 PF08534 Redoxin PGE45_01825 PF00156 Phosphoribosyl transferase domain PGE45_01830 PF00588 SpoU rRNA Methylase family PGE45_01830 PF08032 RNA 2'-O ribose methyltransferase substrate binding PGE45_01835 PF01116 Fructose-bisphosphate aldolase class-II PGE45_01845 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_01850 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_01865 PF00709 Adenylosuccinate synthetase PGE45_01900 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PGE45_01900 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain PGE45_01920 PF01850 PIN domain PGE45_01925 PF09957 Bacterial antitoxin of type II TA system, VapB PGE45_01940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PGE45_01940 PF02843 Phosphoribosylglycinamide synthetase, C domain PGE45_01940 PF02844 Phosphoribosylglycinamide synthetase, N domain PGE45_01945 PF01259 SAICAR synthetase PGE45_02005 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PGE45_02005 PF02769 AIR synthase related protein, C-terminal domain PGE45_02005 PF00586 AIR synthase related protein, N-terminal domain PGE45_02025 PF01066 CDP-alcohol phosphatidyltransferase PGE45_02035 PF01370 NAD dependent epimerase/dehydratase family PGE45_02035 PF08338 Domain of unknown function (DUF1731) PGE45_02040 PF13847 Methyltransferase domain PGE45_02040 PF03551 Transcriptional regulator PadR-like family PGE45_02045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PGE45_02045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PGE45_02050 PF02872 5'-nucleotidase, C-terminal domain PGE45_02050 PF00746 LPXTG cell wall anchor motif PGE45_02050 PF00149 Calcineurin-like phosphoesterase PGE45_02050 PF00565 Staphylococcal nuclease homologue PGE45_02055 PF00455 DeoR C terminal sensor domain PGE45_02055 PF08220 DeoR-like helix-turn-helix domain PGE45_02060 PF00294 pfkB family carbohydrate kinase PGE45_02065 PF02378 Phosphotransferase system, EIIC PGE45_02065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PGE45_02075 PF00575 S1 RNA binding domain PGE45_02075 PF00773 RNB domain PGE45_02075 PF17876 Cold shock domain PGE45_02095 PF02769 AIR synthase related protein, C-terminal domain PGE45_02095 PF00586 AIR synthase related protein, N-terminal domain PGE45_02120 PF00005 ABC transporter PGE45_02120 PF00664 ABC transporter transmembrane region PGE45_02125 PF00005 ABC transporter PGE45_02125 PF00664 ABC transporter transmembrane region PGE45_02130 PF12704 MacB-like periplasmic core domain PGE45_02130 PF02687 FtsX-like permease family PGE45_02135 PF00005 ABC transporter PGE45_02145 PF00933 Glycosyl hydrolase family 3 N terminal domain PGE45_02185 PF01641 SelR domain PGE45_02200 PF00294 pfkB family carbohydrate kinase PGE45_02205 PF02609 Exonuclease VII small subunit PGE45_02210 PF02601 Exonuclease VII, large subunit PGE45_02210 PF13742 OB-fold nucleic acid binding domain PGE45_02215 PF02401 LytB protein PGE45_02220 PF00324 Amino acid permease PGE45_02235 PF04542 Sigma-70 region 2 PGE45_02235 PF08281 Sigma-70, region 4 PGE45_02260 PF03780 Asp23 family, cell envelope-related function PGE45_02265 PF04226 Transglycosylase associated protein PGE45_02270 PF02646 RmuC family PGE45_02280 PF01926 50S ribosome-binding GTPase PGE45_02280 PF06071 Protein of unknown function (DUF933) PGE45_02310 PF08000 Bacterial PH domain PGE45_02345 PF00999 Sodium/hydrogen exchanger family PGE45_02355 PF01381 Helix-turn-helix PGE45_02360 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB PGE45_02365 PF13088 BNR repeat-like domain PGE45_02365 PF00754 F5/8 type C domain PGE45_02365 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase PGE45_02370 PF00561 alpha/beta hydrolase fold PGE45_02375 PF01053 Cys/Met metabolism PLP-dependent enzyme PGE45_02380 PF00877 NlpC/P60 family PGE45_02380 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain PGE45_02385 PF00719 Inorganic pyrophosphatase PGE45_02390 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PGE45_02400 PF00156 Phosphoribosyl transferase domain PGE45_02410 PF00004 ATPase family associated with various cellular activities (AAA) PGE45_02410 PF01434 Peptidase family M41 PGE45_02410 PF17862 AAA+ lid domain PGE45_02415 PF01227 GTP cyclohydrolase I PGE45_02425 PF00893 Small Multidrug Resistance protein PGE45_02430 PF00893 Small Multidrug Resistance protein PGE45_02435 PF00665 Integrase core domain PGE45_02435 PF13936 Helix-turn-helix domain PGE45_02450 PF00196 Bacterial regulatory proteins, luxR family PGE45_02450 PF00072 Response regulator receiver domain PGE45_02455 PF00005 ABC transporter PGE45_02455 PF02687 FtsX-like permease family PGE45_02455 PF12704 MacB-like periplasmic core domain PGE45_02460 PF00005 ABC transporter PGE45_02465 PF00005 ABC transporter PGE45_02465 PF02687 FtsX-like permease family PGE45_02465 PF12704 MacB-like periplasmic core domain PGE45_02470 PF00809 Pterin binding enzyme PGE45_02475 PF02152 Dihydroneopterin aldolase PGE45_02500 PF02569 Pantoate-beta-alanine ligase PGE45_02505 PF02261 Aspartate decarboxylase PGE45_02515 PF00152 tRNA synthetases class II (D, K and N) PGE45_02515 PF01336 OB-fold nucleic acid binding domain PGE45_02545 PF00005 ABC transporter PGE45_02555 PF01032 FecCD transport family PGE45_02560 PF01032 FecCD transport family PGE45_02565 PF00005 ABC transporter PGE45_02570 PF01497 Periplasmic binding protein PGE45_02575 PF00854 POT family PGE45_02580 PF00854 POT family PGE45_02585 PF01070 FMN-dependent dehydrogenase PGE45_02590 PF08125 Mannitol dehydrogenase C-terminal domain PGE45_02590 PF01232 Mannitol dehydrogenase Rossmann domain PGE45_02595 PF02589 LUD domain PGE45_02600 PF02589 LUD domain PGE45_02600 PF13183 4Fe-4S dicluster domain PGE45_02600 PF11870 Domain of unknown function (DUF3390) PGE45_02605 PF02754 Cysteine-rich domain PGE45_02610 PF02652 L-lactate permease PGE45_02615 PF00403 Heavy-metal-associated domain PGE45_02620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PGE45_02620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PGE45_02625 PF00230 Major intrinsic protein PGE45_02630 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PGE45_02630 PF01266 FAD dependent oxidoreductase PGE45_02635 PF13936 Helix-turn-helix domain PGE45_02635 PF04198 Putative sugar-binding domain PGE45_02640 PF00583 Acetyltransferase (GNAT) family PGE45_02665 PF00730 HhH-GPD superfamily base excision DNA repair protein PGE45_02665 PF00633 Helix-hairpin-helix motif PGE45_02675 PF12826 Helix-hairpin-helix motif PGE45_02675 PF10635 DisA bacterial checkpoint controller linker region PGE45_02675 PF02457 DisA bacterial checkpoint controller nucleotide-binding PGE45_02680 PF18073 Rubredoxin metal binding domain PGE45_02690 PF02780 Transketolase, C-terminal domain PGE45_02690 PF00456 Transketolase, thiamine diphosphate binding domain PGE45_02690 PF02779 Transketolase, pyrimidine binding domain PGE45_02720 PF02733 Dak1 domain PGE45_02725 PF02734 DAK2 domain PGE45_02730 PF00391 PEP-utilising enzyme, mobile domain PGE45_02730 PF00381 PTS HPr component phosphorylation site PGE45_02730 PF03610 PTS system fructose IIA component PGE45_02730 PF05524 PEP-utilising enzyme, N-terminal PGE45_02740 PF07690 Major Facilitator Superfamily PGE45_02750 PF02386 Cation transport protein PGE45_02755 PF12728 Helix-turn-helix domain PGE45_02765 PF01565 FAD binding domain PGE45_02765 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PGE45_02770 PF00962 Adenosine/AMP deaminase PGE45_02790 PF00155 Aminotransferase class I and II PGE45_02800 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PGE45_02805 PF02357 Transcription termination factor nusG PGE45_02815 PF00687 Ribosomal protein L1p/L10e family PGE45_02825 PF00691 OmpA family PGE45_02825 PF05736 OprF membrane domain PGE45_02830 PF00691 OmpA family PGE45_02830 PF05736 OprF membrane domain PGE45_02840 PF00223 Photosystem I psaA/psaB protein PGE45_02840 PF00691 OmpA family PGE45_02870 PF00691 OmpA family PGE45_02870 PF05736 OprF membrane domain PGE45_02880 PF00196 Bacterial regulatory proteins, luxR family PGE45_02880 PF00072 Response regulator receiver domain PGE45_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_02885 PF05231 MASE1 PGE45_02885 PF07730 Histidine kinase PGE45_02900 PF00437 Type II/IV secretion system protein PGE45_02910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PGE45_02935 PF00164 Ribosomal protein S12/S23 PGE45_02940 PF00177 Ribosomal protein S7p/S5e PGE45_02945 PF03764 Elongation factor G, domain IV PGE45_02945 PF00009 Elongation factor Tu GTP binding domain PGE45_02945 PF03144 Elongation factor Tu domain 2 PGE45_02945 PF00679 Elongation factor G C-terminus PGE45_02945 PF14492 Elongation Factor G, domain II PGE45_02950 PF00009 Elongation factor Tu GTP binding domain PGE45_02950 PF03144 Elongation factor Tu domain 2 PGE45_02950 PF03143 Elongation factor Tu C-terminal domain PGE45_02960 PF00746 LPXTG cell wall anchor motif PGE45_02960 PF16555 Gram-positive pilin subunit D1, N-terminal domain PGE45_02970 PF00338 Ribosomal protein S10p/S20e PGE45_02975 PF00297 Ribosomal protein L3 PGE45_02980 PF00573 Ribosomal protein L4/L1 family PGE45_02985 PF00276 Ribosomal protein L23 PGE45_02990 PF03947 Ribosomal Proteins L2, C-terminal domain PGE45_02990 PF00181 Ribosomal Proteins L2, RNA binding domain PGE45_02995 PF00203 Ribosomal protein S19 PGE45_03000 PF00237 Ribosomal protein L22p/L17e PGE45_03005 PF07650 KH domain PGE45_03005 PF00189 Ribosomal protein S3, C-terminal domain PGE45_03010 PF00252 Ribosomal protein L16p/L10e PGE45_03015 PF00831 Ribosomal L29 protein PGE45_03020 PF00366 Ribosomal protein S17 PGE45_03025 PF00238 Ribosomal protein L14p/L23e PGE45_03030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PGE45_03035 PF00281 Ribosomal protein L5 PGE45_03035 PF00673 ribosomal L5P family C-terminus PGE45_03040 PF00253 Ribosomal protein S14p/S29e PGE45_03045 PF00410 Ribosomal protein S8 PGE45_03050 PF00347 Ribosomal protein L6 PGE45_03055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PGE45_03060 PF03719 Ribosomal protein S5, C-terminal domain PGE45_03060 PF00333 Ribosomal protein S5, N-terminal domain PGE45_03065 PF00327 Ribosomal protein L30p/L7e PGE45_03070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PGE45_03075 PF00344 SecY translocase PGE45_03085 PF00557 Metallopeptidase family M24 PGE45_03090 PF01176 Translation initiation factor 1A / IF-1 PGE45_03095 PF00444 Ribosomal protein L36 PGE45_03100 PF00416 Ribosomal protein S13/S18 PGE45_03105 PF00411 Ribosomal protein S11 PGE45_03110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PGE45_03110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PGE45_03110 PF01000 RNA polymerase Rpb3/RpoA insert domain PGE45_03115 PF01196 Ribosomal protein L17 PGE45_03125 PF02308 MgtC family PGE45_03130 PF02233 NAD(P) transhydrogenase beta subunit PGE45_03135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PGE45_03135 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PGE45_03135 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PGE45_03145 PF01416 tRNA pseudouridine synthase PGE45_03150 PF00572 Ribosomal protein L13 PGE45_03155 PF00380 Ribosomal protein S9/S16 PGE45_03160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGE45_03160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGE45_03160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGE45_03160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGE45_03170 PF01061 ABC-2 type transporter PGE45_03175 PF00005 ABC transporter PGE45_03175 PF13732 Domain of unknown function (DUF4162) PGE45_03185 PF01381 Helix-turn-helix PGE45_03190 PF00561 alpha/beta hydrolase fold PGE45_03195 PF00485 Phosphoribulokinase / Uridine kinase family PGE45_03200 PF01380 SIS domain PGE45_03205 PF01648 4'-phosphopantetheinyl transferase superfamily PGE45_03210 PF03853 YjeF-related protein N-terminus PGE45_03210 PF01256 Carbohydrate kinase PGE45_03215 PF00842 Alanine racemase, C-terminal domain PGE45_03215 PF01168 Alanine racemase, N-terminal domain PGE45_03220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PGE45_03245 PF00890 FAD binding domain PGE45_03245 PF02910 Fumarate reductase flavoprotein C-term PGE45_03250 PF13085 2Fe-2S iron-sulfur cluster binding domain PGE45_03250 PF13183 4Fe-4S dicluster domain PGE45_03260 PF00814 Glycoprotease family PGE45_03270 PF04954 Siderophore-interacting protein PGE45_03270 PF08021 Siderophore-interacting FAD-binding domain PGE45_03270 PF00664 ABC transporter transmembrane region PGE45_03270 PF00005 ABC transporter PGE45_03275 PF04107 Glutamate-cysteine ligase family 2(GCS2) PGE45_03285 PF02698 DUF218 domain PGE45_03290 PF00166 Chaperonin 10 Kd subunit PGE45_03295 PF02467 Transcription factor WhiB PGE45_03300 PF00571 CBS domain PGE45_03300 PF00478 IMP dehydrogenase / GMP reductase domain PGE45_03310 PF00478 IMP dehydrogenase / GMP reductase domain PGE45_03315 PF00381 PTS HPr component phosphorylation site PGE45_03320 PF06800 Sugar transport protein PGE45_03350 PF00474 Sodium:solute symporter family PGE45_03355 PF00075 RNase H PGE45_03365 PF00072 Response regulator receiver domain PGE45_03365 PF00196 Bacterial regulatory proteins, luxR family PGE45_03370 PF07730 Histidine kinase PGE45_03385 PF00005 ABC transporter PGE45_03390 PF00871 Acetokinase family PGE45_03395 PF07085 DRTGG domain PGE45_03395 PF01515 Phosphate acetyl/butaryl transferase PGE45_03420 PF01261 Xylose isomerase-like TIM barrel PGE45_03425 PF00083 Sugar (and other) transporter PGE45_03430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PGE45_03430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PGE45_03435 PF00356 Bacterial regulatory proteins, lacI family PGE45_03440 PF01263 Aldose 1-epimerase PGE45_03445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PGE45_03445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PGE45_03450 PF00923 Transaldolase/Fructose-6-phosphate aldolase PGE45_03455 PF07702 UTRA domain PGE45_03455 PF00392 Bacterial regulatory proteins, gntR family PGE45_03460 PF00294 pfkB family carbohydrate kinase PGE45_03470 PF04962 KduI/IolB family PGE45_03475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PGE45_03475 PF00205 Thiamine pyrophosphate enzyme, central domain PGE45_03475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PGE45_03480 PF00171 Aldehyde dehydrogenase family PGE45_03485 PF00083 Sugar (and other) transporter PGE45_03495 PF00107 Zinc-binding dehydrogenase PGE45_03495 PF08240 Alcohol dehydrogenase GroES-like domain PGE45_03505 PF02540 NAD synthase PGE45_03505 PF00958 GMP synthase C terminal domain PGE45_03505 PF00117 Glutamine amidotransferase class-I PGE45_03525 PF00005 ABC transporter PGE45_03530 PF07730 Histidine kinase PGE45_03535 PF00196 Bacterial regulatory proteins, luxR family PGE45_03535 PF00072 Response regulator receiver domain PGE45_03550 PF14310 Fibronectin type III-like domain PGE45_03550 PF01915 Glycosyl hydrolase family 3 C-terminal domain PGE45_03550 PF00933 Glycosyl hydrolase family 3 N terminal domain PGE45_03570 PF12146 Serine aminopeptidase, S33 PGE45_03580 PF02661 Fic/DOC family PGE45_03590 PF07728 AAA domain (dynein-related subfamily) PGE45_03590 PF12102 Domain of unknown function (DUF3578) PGE45_03595 PF10117 McrBC 5-methylcytosine restriction system component PGE45_03600 PF00665 Integrase core domain PGE45_03600 PF13936 Helix-turn-helix domain PGE45_03605 PF00128 Alpha amylase, catalytic domain PGE45_03605 PF09154 Domain of unknown function (DUF1939) PGE45_03610 PF08402 TOBE domain PGE45_03610 PF00005 ABC transporter PGE45_03615 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_03625 PF00072 Response regulator receiver domain PGE45_03625 PF00486 Transcriptional regulatory protein, C terminal PGE45_03630 PF00672 HAMP domain PGE45_03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_03630 PF00512 His Kinase A (phospho-acceptor) domain PGE45_03655 PF00672 HAMP domain PGE45_03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_03655 PF00512 His Kinase A (phospho-acceptor) domain PGE45_03660 PF00196 Bacterial regulatory proteins, luxR family PGE45_03660 PF00072 Response regulator receiver domain PGE45_03665 PF01300 Telomere recombination PGE45_03670 PF00953 Glycosyl transferase family 4 PGE45_03680 PF00119 ATP synthase A chain PGE45_03685 PF00137 ATP synthase subunit C PGE45_03690 PF00430 ATP synthase B/B' CF(0) PGE45_03695 PF00213 ATP synthase delta (OSCP) subunit PGE45_03700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PGE45_03700 PF00306 ATP synthase alpha/beta chain, C terminal domain PGE45_03700 PF02874 ATP synthase alpha/beta family, beta-barrel domain PGE45_03705 PF00231 ATP synthase PGE45_03710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PGE45_03710 PF02874 ATP synthase alpha/beta family, beta-barrel domain PGE45_03715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PGE45_03725 PF01939 Endonuclease NucS PGE45_03735 PF01979 Amidohydrolase family PGE45_03755 PF00551 Formyl transferase PGE45_03765 PF01774 UreD urease accessory protein PGE45_03770 PF02492 CobW/HypB/UreG, nucleotide-binding domain PGE45_03775 PF01730 UreF PGE45_03780 PF02814 UreE urease accessory protein, N-terminal domain PGE45_03785 PF01979 Amidohydrolase family PGE45_03785 PF00449 Urease alpha-subunit, N-terminal domain PGE45_03790 PF00699 Urease beta subunit PGE45_03795 PF00547 Urease, gamma subunit PGE45_03800 PF00444 Ribosomal protein L36 PGE45_03805 PF01197 Ribosomal protein L31 PGE45_03810 PF00253 Ribosomal protein S14p/S29e PGE45_03815 PF00471 Ribosomal protein L33 PGE45_03820 PF00830 Ribosomal L28 family PGE45_03830 PF00464 Serine hydroxymethyltransferase PGE45_03835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PGE45_03835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PGE45_03840 PF08244 Glycosyl hydrolases family 32 C terminal PGE45_03840 PF00251 Glycosyl hydrolases family 32 N-terminal domain PGE45_03845 PF02435 Levansucrase/Invertase PGE45_03860 PF00708 Acylphosphatase PGE45_03870 PF12704 MacB-like periplasmic core domain PGE45_03870 PF00005 ABC transporter PGE45_03870 PF02687 FtsX-like permease family PGE45_03875 PF02687 FtsX-like permease family PGE45_03875 PF12704 MacB-like periplasmic core domain PGE45_03875 PF00005 ABC transporter PGE45_03885 PF00288 GHMP kinases N terminal domain PGE45_03885 PF08544 GHMP kinases C terminal PGE45_03885 PF10509 Galactokinase galactose-binding signature PGE45_03890 PF00455 DeoR C terminal sensor domain PGE45_03890 PF08220 DeoR-like helix-turn-helix domain PGE45_03905 PF01050 Mannose-6-phosphate isomerase PGE45_03905 PF00483 Nucleotidyl transferase PGE45_03910 PF02608 ABC transporter substrate-binding protein PnrA-like PGE45_03915 PF00005 ABC transporter PGE45_03920 PF02653 Branched-chain amino acid transport system / permease component PGE45_03925 PF02653 Branched-chain amino acid transport system / permease component PGE45_03930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PGE45_03935 PF02885 Glycosyl transferase family, helical bundle domain PGE45_03935 PF00591 Glycosyl transferase family, a/b domain PGE45_03935 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PGE45_03945 PF01791 DeoC/LacD family aldolase PGE45_03950 PF01297 Zinc-uptake complex component A periplasmic PGE45_03955 PF00005 ABC transporter PGE45_03960 PF00950 ABC 3 transport family PGE45_03965 PF00950 ABC 3 transport family PGE45_03965 PF02742 Iron dependent repressor, metal binding and dimerisation domain PGE45_03970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGE45_03970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGE45_03970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGE45_03970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGE45_03975 PF03641 Possible lysine decarboxylase PGE45_03985 PF01596 O-methyltransferase PGE45_03990 PF02416 mttA/Hcf106 family PGE45_03995 PF10609 NUBPL iron-transfer P-loop NTPase PGE45_03995 PF01883 Iron-sulfur cluster assembly protein PGE45_04005 PF03448 MgtE intracellular N domain PGE45_04005 PF01769 Divalent cation transporter PGE45_04005 PF00571 CBS domain PGE45_04015 PF01261 Xylose isomerase-like TIM barrel PGE45_04020 PF16916 Dimerisation domain of Zinc Transporter PGE45_04020 PF01545 Cation efflux family PGE45_04025 PF01022 Bacterial regulatory protein, arsR family PGE45_04030 PF05195 Aminopeptidase P, N-terminal domain PGE45_04030 PF00557 Metallopeptidase family M24 PGE45_04035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PGE45_04035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PGE45_04045 PF01914 MarC family integral membrane protein PGE45_04050 PF00270 DEAD/DEAH box helicase PGE45_04050 PF00271 Helicase conserved C-terminal domain PGE45_04075 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PGE45_04080 PF01048 Phosphorylase superfamily PGE45_04095 PF10415 Fumarase C C-terminus PGE45_04095 PF00206 Lyase PGE45_04110 PF00005 ABC transporter PGE45_04110 PF00571 CBS domain PGE45_04115 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_04135 PF01638 HxlR-like helix-turn-helix PGE45_04140 PF00186 Dihydrofolate reductase PGE45_04145 PF00303 Thymidylate synthase PGE45_04155 PF02566 OsmC-like protein PGE45_04165 PF12282 Signal transduction histidine kinase PGE45_04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_04165 PF07568 Histidine kinase PGE45_04170 PF02467 Transcription factor WhiB PGE45_04175 PF01580 FtsK/SpoIIIE family PGE45_04180 PF12826 Helix-hairpin-helix motif PGE45_04180 PF00533 BRCA1 C Terminus (BRCT) domain PGE45_04180 PF03120 NAD-dependent DNA ligase OB-fold domain PGE45_04180 PF01653 NAD-dependent DNA ligase adenylation domain PGE45_04180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PGE45_04190 PF02686 Glu-tRNAGln amidotransferase C subunit PGE45_04195 PF01425 Amidase PGE45_04200 PF02934 GatB/GatE catalytic domain PGE45_04200 PF02637 GatB domain PGE45_04205 PF00390 Malic enzyme, N-terminal domain PGE45_04205 PF03949 Malic enzyme, NAD binding domain PGE45_04230 PF06738 Putative threonine/serine exporter PGE45_04235 PF06826 Predicted Permease Membrane Region PGE45_04235 PF02080 TrkA-C domain PGE45_04240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PGE45_04240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PGE45_04240 PF00205 Thiamine pyrophosphate enzyme, central domain PGE45_04245 PF01842 ACT domain PGE45_04245 PF10369 Small subunit of acetolactate synthase PGE45_04250 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PGE45_04250 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PGE45_04260 PF18665 Tetracyclin repressor-like, C-terminal domain PGE45_04260 PF00440 Bacterial regulatory proteins, tetR family PGE45_04265 PF00180 Isocitrate/isopropylmalate dehydrogenase PGE45_04280 PF01063 Amino-transferase class IV PGE45_04285 PF03816 Cell envelope-related transcriptional attenuator domain PGE45_04290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PGE45_04290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PGE45_04290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PGE45_04295 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase PGE45_04300 PF01467 Cytidylyltransferase-like PGE45_04305 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase PGE45_04320 PF00535 Glycosyl transferase family 2 PGE45_04330 PF08239 Bacterial SH3 domain PGE45_04330 PF00005 ABC transporter PGE45_04350 PF00953 Glycosyl transferase family 4 PGE45_04360 PF01467 Cytidylyltransferase-like PGE45_04365 PF01522 Polysaccharide deacetylase PGE45_04375 PF00929 Exonuclease PGE45_04380 PF00069 Protein kinase domain PGE45_04385 PF01061 ABC-2 type transporter PGE45_04385 PF00005 ABC transporter PGE45_04385 PF00498 FHA domain PGE45_04395 PF03193 RsgA GTPase PGE45_04400 PF00009 Elongation factor Tu GTP binding domain PGE45_04400 PF04760 Translation initiation factor IF-2, N-terminal region PGE45_04400 PF11987 Translation-initiation factor 2 PGE45_04415 PF00005 ABC transporter PGE45_04420 PF18075 FtsX extracellular domain PGE45_04420 PF02687 FtsX-like permease family PGE45_04425 PF08460 Bacterial SH3 domain PGE45_04425 PF01551 Peptidase family M23 PGE45_04430 PF01668 SmpB protein PGE45_04440 PF07729 FCD domain PGE45_04445 PF07859 alpha/beta hydrolase fold PGE45_04450 PF07729 FCD domain PGE45_04460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PGE45_04465 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_04470 PF00005 ABC transporter PGE45_04470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PGE45_04475 PF00005 ABC transporter PGE45_04475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PGE45_04480 PF00701 Dihydrodipicolinate synthetase family PGE45_04485 PF00480 ROK family PGE45_04490 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase PGE45_04495 PF00216 Bacterial DNA-binding protein PGE45_04500 PF13732 Domain of unknown function (DUF4162) PGE45_04500 PF00005 ABC transporter PGE45_04510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PGE45_04520 PF04851 Type III restriction enzyme, res subunit PGE45_04525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PGE45_04525 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PGE45_04530 PF02617 ATP-dependent Clp protease adaptor protein ClpS PGE45_04540 PF01177 Asp/Glu/Hydantoin racemase PGE45_04545 PF12706 Beta-lactamase superfamily domain PGE45_04560 PF01725 Ham1 family PGE45_04565 PF01138 3' exoribonuclease family, domain 1 PGE45_04565 PF03725 3' exoribonuclease family, domain 2 PGE45_04570 PF03992 Antibiotic biosynthesis monooxygenase PGE45_04590 PF00578 AhpC/TSA family PGE45_04620 PF03733 Inner membrane component domain PGE45_04625 PF02574 Homocysteine S-methyltransferase PGE45_04640 PF00270 DEAD/DEAH box helicase PGE45_04640 PF08148 DSHCT (NUC185) domain PGE45_04640 PF00271 Helicase conserved C-terminal domain PGE45_04650 PF01235 Sodium:alanine symporter family PGE45_04655 PF01235 Sodium:alanine symporter family PGE45_04660 PF01235 Sodium:alanine symporter family PGE45_04665 PF01235 Sodium:alanine symporter family PGE45_04670 PF01557 Fumarylacetoacetate (FAA) hydrolase family PGE45_04680 PF00749 tRNA synthetases class I (E and Q), catalytic domain PGE45_04710 PF01522 Polysaccharide deacetylase PGE45_04715 PF12706 Beta-lactamase superfamily domain PGE45_04715 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PGE45_04715 PF17770 Ribonuclease J C-terminal domain PGE45_04725 PF17854 FtsK alpha domain PGE45_04725 PF09397 Ftsk gamma domain PGE45_04725 PF01580 FtsK/SpoIIIE family PGE45_04730 PF09587 Bacterial capsule synthesis protein PGA_cap PGE45_04735 PF01066 CDP-alcohol phosphatidyltransferase PGE45_04740 PF18146 Damage-inducible protein CinA KH domain PGE45_04740 PF00994 Probable molybdopterin binding domain PGE45_04740 PF02464 Competence-damaged protein PGE45_04755 PF00154 recA bacterial DNA recombination protein PGE45_04760 PF02631 RecX family PGE45_04770 PF01268 Formate--tetrahydrofolate ligase PGE45_04780 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_04785 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_04790 PF16875 Glycosyl hydrolase family 36 N-terminal domain PGE45_04790 PF16874 Glycosyl hydrolase family 36 C-terminal domain PGE45_04795 PF00480 ROK family PGE45_04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGE45_04805 PF01597 Glycine cleavage H-protein PGE45_04810 PF01571 Aminomethyltransferase folate-binding domain PGE45_04810 PF08669 Glycine cleavage T-protein C-terminal barrel domain PGE45_04815 PF02347 Glycine cleavage system P-protein PGE45_04820 PF00919 Uncharacterized protein family UPF0004 PGE45_04820 PF04055 Radical SAM superfamily PGE45_04840 PF01678 Diaminopimelate epimerase PGE45_04845 PF05525 Branched-chain amino acid transport protein PGE45_04850 PF07690 Major Facilitator Superfamily PGE45_04855 PF05175 Methyltransferase small domain PGE45_04855 PF08468 Methyltransferase small domain N-terminal PGE45_04865 PF16360 GTP-binding GTPase Middle Region PGE45_04865 PF13167 GTP-binding GTPase N-terminal PGE45_04865 PF01926 50S ribosome-binding GTPase PGE45_04870 PF13307 Helicase C-terminal domain PGE45_04875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PGE45_04875 PF00056 lactate/malate dehydrogenase, NAD binding domain PGE45_04880 PF01726 LexA DNA binding domain PGE45_04880 PF00717 Peptidase S24-like PGE45_04890 PF03477 ATP cone domain PGE45_04905 PF00330 Aconitase family (aconitate hydratase) PGE45_04910 PF00694 Aconitase C-terminal domain PGE45_04915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PGE45_04920 PF01553 Acyltransferase PGE45_04925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PGE45_04925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PGE45_04930 PF01820 D-ala D-ala ligase N-terminus PGE45_04930 PF07478 D-ala D-ala ligase C-terminus PGE45_04935 PF00586 AIR synthase related protein, N-terminal domain PGE45_04935 PF02769 AIR synthase related protein, C-terminal domain PGE45_04940 PF00830 Ribosomal L28 family PGE45_04945 PF13684 Dihydroxyacetone kinase family PGE45_04945 PF02734 DAK2 domain PGE45_04950 PF00270 DEAD/DEAH box helicase PGE45_04950 PF00271 Helicase conserved C-terminal domain PGE45_04950 PF17191 RecG wedge domain PGE45_04960 PF00596 Class II Aldolase and Adducin N-terminal domain PGE45_04965 PF02952 L-fucose isomerase, C-terminal domain PGE45_04965 PF07881 L-fucose isomerase, first N-terminal domain PGE45_04965 PF07882 L-fucose isomerase, second N-terminal domain PGE45_04970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PGE45_04975 PF05025 RbsD / FucU transport protein family PGE45_04980 PF07690 Major Facilitator Superfamily PGE45_04985 PF00356 Bacterial regulatory proteins, lacI family PGE45_04990 PF01467 Cytidylyltransferase-like PGE45_05000 PF02620 Large ribosomal RNA subunit accumulation protein YceD PGE45_05005 PF00035 Double-stranded RNA binding motif PGE45_05005 PF14622 Ribonuclease-III-like PGE45_05010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PGE45_05010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PGE45_05010 PF06827 Zinc finger found in FPG and IleRS PGE45_05015 PF00196 Bacterial regulatory proteins, luxR family PGE45_05015 PF00072 Response regulator receiver domain PGE45_05025 PF00005 ABC transporter PGE45_05025 PF00664 ABC transporter transmembrane region PGE45_05030 PF00664 ABC transporter transmembrane region PGE45_05030 PF00005 ABC transporter PGE45_05035 PF02322 Cytochrome bd terminal oxidase subunit II PGE45_05040 PF01654 Cytochrome bd terminal oxidase subunit I PGE45_05045 PF10150 Ribonuclease E/G family PGE45_05050 PF00829 Ribosomal prokaryotic L21 protein PGE45_05055 PF01016 Ribosomal L27 protein PGE45_05060 PF09269 Domain of unknown function (DUF1967) PGE45_05060 PF01018 GTP1/OBG PGE45_05060 PF01926 50S ribosome-binding GTPase PGE45_05065 PF00696 Amino acid kinase family PGE45_05065 PF01472 PUA domain PGE45_05070 PF02463 RecF/RecN/SMC N terminal domain PGE45_05075 PF00171 Aldehyde dehydrogenase family PGE45_05085 PF00072 Response regulator receiver domain PGE45_05085 PF00486 Transcriptional regulatory protein, C terminal PGE45_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_05090 PF00512 His Kinase A (phospho-acceptor) domain PGE45_05090 PF16736 Single Cache-like PGE45_05090 PF00989 PAS fold PGE45_05095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PGE45_05095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PGE45_05095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PGE45_05110 PF00005 ABC transporter PGE45_05110 PF00664 ABC transporter transmembrane region PGE45_05115 PF13439 Glycosyltransferase Family 4 PGE45_05115 PF00534 Glycosyl transferases group 1 PGE45_05120 PF00534 Glycosyl transferases group 1 PGE45_05125 PF04101 Glycosyltransferase family 28 C-terminal domain PGE45_05125 PF03033 Glycosyltransferase family 28 N-terminal domain PGE45_05130 PF00455 DeoR C terminal sensor domain PGE45_05130 PF08220 DeoR-like helix-turn-helix domain PGE45_05140 PF01467 Cytidylyltransferase-like PGE45_05155 PF00300 Histidine phosphatase superfamily (branch 1) PGE45_05170 PF01914 MarC family integral membrane protein PGE45_05185 PF01048 Phosphorylase superfamily PGE45_05190 PF00209 Sodium:neurotransmitter symporter family PGE45_05220 PF01230 HIT domain PGE45_05230 PF09334 tRNA synthetases class I (M) PGE45_05230 PF13603 Leucyl-tRNA synthetase, Domain 2 PGE45_05230 PF08264 Anticodon-binding domain of tRNA PGE45_05240 PF05872 Bacterial protein of unknown function (DUF853) PGE45_05245 PF13439 Glycosyltransferase Family 4 PGE45_05245 PF00534 Glycosyl transferases group 1 PGE45_05250 PF02645 Uncharacterised protein, DegV family COG1307 PGE45_05270 PF00885 6,7-dimethyl-8-ribityllumazine synthase PGE45_05275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PGE45_05275 PF00925 GTP cyclohydrolase II PGE45_05280 PF00677 Lumazine binding domain PGE45_05285 PF01872 RibD C-terminal domain PGE45_05285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PGE45_05290 PF08903 Domain of unknown function (DUF1846) PGE45_05295 PF01649 Ribosomal protein S20 PGE45_05315 PF00290 Tryptophan synthase alpha chain PGE45_05320 PF00291 Pyridoxal-phosphate dependent enzyme PGE45_05325 PF02885 Glycosyl transferase family, helical bundle domain PGE45_05325 PF00591 Glycosyl transferase family, a/b domain PGE45_05330 PF00117 Glutamine amidotransferase class-I PGE45_05335 PF00425 chorismate binding enzyme PGE45_05335 PF04715 Anthranilate synthase component I, N terminal region PGE45_05340 PF00082 Subtilase family PGE45_05340 PF04151 Bacterial pre-peptidase C-terminal domain PGE45_05350 PF06421 GTP-binding protein LepA C-terminus PGE45_05350 PF00009 Elongation factor Tu GTP binding domain PGE45_05350 PF00679 Elongation factor G C-terminus PGE45_05360 PF02390 Putative methyltransferase PGE45_05365 PF07690 Major Facilitator Superfamily PGE45_05370 PF04055 Radical SAM superfamily PGE45_05380 PF00762 Ferrochelatase PGE45_05395 PF01628 HrcA protein C terminal domain PGE45_05400 PF00226 DnaJ domain PGE45_05400 PF00684 DnaJ central domain PGE45_05400 PF01556 DnaJ C terminal domain PGE45_05405 PF01168 Alanine racemase, N-terminal domain PGE45_05410 PF04452 RNA methyltransferase PGE45_05425 PF13977 BetI-type transcriptional repressor, C-terminal PGE45_05425 PF00440 Bacterial regulatory proteins, tetR family PGE45_05430 PF00005 ABC transporter PGE45_05440 PF00892 EamA-like transporter family PGE45_05485 PF02562 PhoH-like protein PGE45_05490 PF02130 Uncharacterized protein family UPF0054 PGE45_05495 PF00571 CBS domain PGE45_05495 PF03471 Transporter associated domain PGE45_05495 PF01595 Cyclin M transmembrane N-terminal domain PGE45_05500 PF07650 KH domain PGE45_05500 PF01926 50S ribosome-binding GTPase PGE45_05505 PF14850 DNA-binding domain of Proline dehydrogenase PGE45_05505 PF01619 Proline dehydrogenase PGE45_05505 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PGE45_05505 PF00171 Aldehyde dehydrogenase family PGE45_05510 PF01402 Ribbon-helix-helix protein, copG family PGE45_05515 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PGE45_05520 PF01381 Helix-turn-helix PGE45_05530 PF00005 ABC transporter PGE45_05535 PF00682 HMGL-like PGE45_05535 PF08502 LeuA allosteric (dimerisation) domain PGE45_05540 PF02565 Recombination protein O C terminal PGE45_05540 PF11967 Recombination protein O N terminal PGE45_05545 PF01255 Putative undecaprenyl diphosphate synthase PGE45_05555 PF00950 ABC 3 transport family PGE45_05560 PF00005 ABC transporter PGE45_05565 PF01297 Zinc-uptake complex component A periplasmic PGE45_05565 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment PGE45_05570 PF03129 Anticodon binding domain PGE45_05570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PGE45_05580 PF01207 Dihydrouridine synthase (Dus) PGE45_05600 PF00483 Nucleotidyl transferase PGE45_05605 PF13439 Glycosyltransferase Family 4 PGE45_05605 PF00534 Glycosyl transferases group 1 PGE45_05615 PF00005 ABC transporter PGE45_05625 PF01145 SPFH domain / Band 7 family PGE45_05630 PF00588 SpoU rRNA Methylase family PGE45_05635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PGE45_05635 PF00367 phosphotransferase system, EIIB PGE45_05635 PF02378 Phosphotransferase system, EIIC PGE45_05645 PF12848 ABC transporter PGE45_05645 PF00005 ABC transporter PGE45_05650 PF01521 Iron-sulphur cluster biosynthesis PGE45_05655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PGE45_05655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PGE45_05660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PGE45_05660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PGE45_05670 PF00929 Exonuclease PGE45_05670 PF01541 GIY-YIG catalytic domain PGE45_05690 PF00365 Phosphofructokinase PGE45_05695 PF01474 Class-II DAHP synthetase family PGE45_05700 PF03793 PASTA domain PGE45_05700 PF00069 Protein kinase domain PGE45_05705 PF00348 Polyprenyl synthetase PGE45_05710 PF04545 Sigma-70, region 4 PGE45_05710 PF00140 Sigma-70 factor, region 1.2 PGE45_05710 PF04539 Sigma-70 region 3 PGE45_05710 PF04542 Sigma-70 region 2 PGE45_05735 PF00204 DNA gyrase B PGE45_05735 PF00986 DNA gyrase B subunit, carboxyl terminus PGE45_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_05735 PF01751 Toprim domain PGE45_05740 PF00583 Acetyltransferase (GNAT) family PGE45_05745 PF07969 Amidohydrolase family PGE45_05750 PF03989 DNA gyrase C-terminal domain, beta-propeller PGE45_05750 PF00521 DNA gyrase/topoisomerase IV, subunit A PGE45_05790 PF02254 TrkA-N domain PGE45_05790 PF02080 TrkA-C domain PGE45_05795 PF02254 TrkA-N domain PGE45_05795 PF02080 TrkA-C domain PGE45_05800 PF13520 Amino acid permease PGE45_05805 PF05958 tRNA (Uracil-5-)-methyltransferase PGE45_05805 PF01938 TRAM domain PGE45_05810 PF00330 Aconitase family (aconitate hydratase) PGE45_05810 PF00694 Aconitase C-terminal domain PGE45_05815 PF00561 alpha/beta hydrolase fold PGE45_05820 PF13305 Tetracyclin repressor-like, C-terminal domain PGE45_05820 PF00440 Bacterial regulatory proteins, tetR family PGE45_05825 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGE45_05825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PGE45_05840 PF00588 SpoU rRNA Methylase family PGE45_05845 PF00106 short chain dehydrogenase PGE45_05850 PF01161 Phosphatidylethanolamine-binding protein PGE45_05865 PF01569 PAP2 superfamily PGE45_05870 PF00265 Thymidine kinase PGE45_05890 PF01336 OB-fold nucleic acid binding domain PGE45_05890 PF02811 PHP domain PGE45_05890 PF14579 Helix-hairpin-helix motif PGE45_05890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PGE45_05890 PF07733 Bacterial DNA polymerase III alpha NTPase domain PGE45_05895 PF01594 AI-2E family transporter PGE45_05930 PF07690 Major Facilitator Superfamily PGE45_05940 PF01432 Peptidase family M3 PGE45_05945 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGE45_05955 PF01497 Periplasmic binding protein PGE45_05960 PF01032 FecCD transport family PGE45_05965 PF01032 FecCD transport family PGE45_05970 PF00005 ABC transporter PGE45_05975 PF00248 Aldo/keto reductase family PGE45_05980 PF01206 Sulfurtransferase TusA PGE45_05985 PF04143 Sulphur transport PGE45_05990 PF12705 PD-(D/E)XK nuclease superfamily PGE45_05995 PF02163 Peptidase family M50 PGE45_05995 PF00571 CBS domain PGE45_06000 PF04261 Dyp-type peroxidase family PGE45_06005 PF04454 Encapsulating protein for peroxidase PGE45_06010 PF08704 tRNA methyltransferase complex GCD14 subunit PGE45_06015 PF17758 Proteasomal ATPase OB N-terminal domain PGE45_06015 PF16450 Proteasomal ATPase OB C-terminal domain PGE45_06015 PF00004 ATPase family associated with various cellular activities (AAA) PGE45_06020 PF03136 Pup-ligase protein PGE45_06025 PF05639 Pup-like protein PGE45_06030 PF03136 Pup-ligase protein PGE45_06040 PF00977 Histidine biosynthesis protein PGE45_06055 PF01502 Phosphoribosyl-AMP cyclohydrolase PGE45_06060 PF00218 Indole-3-glycerol phosphate synthase PGE45_06065 PF01790 Prolipoprotein diacylglyceryl transferase PGE45_06070 PF02887 Pyruvate kinase, alpha/beta domain PGE45_06070 PF00224 Pyruvate kinase, barrel domain PGE45_06085 PF03861 ANTAR domain PGE45_06085 PF00072 Response regulator receiver domain PGE45_06090 PF03061 Thioesterase superfamily PGE45_06095 PF01367 5'-3' exonuclease, C-terminal SAM fold PGE45_06095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PGE45_06095 PF00476 DNA polymerase family A PGE45_06100 PF00575 S1 RNA binding domain PGE45_06110 PF01121 Dephospho-CoA kinase PGE45_06115 PF17757 UvrB interaction domain PGE45_06115 PF12344 Ultra-violet resistance protein B PGE45_06115 PF02151 UvrB/uvrC motif PGE45_06115 PF04851 Type III restriction enzyme, res subunit PGE45_06115 PF00271 Helicase conserved C-terminal domain PGE45_06120 PF03741 Integral membrane protein TerC family PGE45_06130 PF13847 Methyltransferase domain PGE45_06130 PF03551 Transcriptional regulator PadR-like family PGE45_06140 PF17760 UvrA interaction domain PGE45_06140 PF17755 UvrA DNA-binding domain PGE45_06140 PF00005 ABC transporter PGE45_06175 PF08459 UvrC Helix-hairpin-helix N-terminal PGE45_06175 PF02151 UvrB/uvrC motif PGE45_06175 PF01541 GIY-YIG catalytic domain PGE45_06180 PF03459 TOBE domain PGE45_06185 PF00232 Glycosyl hydrolase family 1 PGE45_06190 PF02222 ATP-grasp domain PGE45_06190 PF01370 NAD dependent epimerase/dehydratase family PGE45_06195 PF03668 P-loop ATPase protein family PGE45_06200 PF01933 Uncharacterised protein family UPF0052 PGE45_06205 PF14527 WhiA LAGLIDADG-like domain PGE45_06205 PF10298 WhiA N-terminal LAGLIDADG-like domain PGE45_06205 PF02650 WhiA C-terminal HTH domain PGE45_06210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PGE45_06210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PGE45_06215 PF00162 Phosphoglycerate kinase PGE45_06220 PF00121 Triosephosphate isomerase PGE45_06225 PF03840 Preprotein translocase SecG subunit PGE45_06230 PF02899 Phage integrase, N-terminal SAM-like domain PGE45_06230 PF00589 Phage integrase family PGE45_06235 PF13614 AAA domain PGE45_06240 PF02616 Segregation and condensation protein ScpA PGE45_06245 PF04079 Segregation and condensation complex subunit ScpB PGE45_06250 PF00849 RNA pseudouridylate synthase PGE45_06250 PF01479 S4 domain PGE45_06255 PF02153 Prephenate dehydrogenase PGE45_06260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PGE45_06260 PF01926 50S ribosome-binding GTPase PGE45_06280 PF00342 Phosphoglucose isomerase PGE45_06285 PF00581 Rhodanese-like domain PGE45_06290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PGE45_06315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PGE45_06325 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PGE45_06325 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PGE45_06330 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PGE45_06330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PGE45_06335 PF11838 ERAP1-like C-terminal domain PGE45_06335 PF01433 Peptidase family M1 domain PGE45_06340 PF00498 FHA domain PGE45_06345 PF00376 MerR family regulatory protein PGE45_06355 PF13411 MerR HTH family regulatory protein PGE45_06360 PF00248 Aldo/keto reductase family PGE45_06365 PF00012 Hsp70 protein PGE45_06370 PF01384 Phosphate transporter family PGE45_06380 PF08244 Glycosyl hydrolases family 32 C terminal PGE45_06380 PF00251 Glycosyl hydrolases family 32 N-terminal domain PGE45_06385 PF02378 Phosphotransferase system, EIIC PGE45_06385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PGE45_06385 PF00367 phosphotransferase system, EIIB PGE45_06390 PF00356 Bacterial regulatory proteins, lacI family PGE45_06400 PF00005 ABC transporter PGE45_06405 PF02687 FtsX-like permease family PGE45_06410 PF00005 ABC transporter PGE45_06410 PF17755 UvrA DNA-binding domain PGE45_06410 PF17760 UvrA interaction domain PGE45_06415 PF00005 ABC transporter PGE45_06415 PF17755 UvrA DNA-binding domain PGE45_06415 PF17760 UvrA interaction domain PGE45_06425 PF00365 Phosphofructokinase PGE45_06430 PF13397 RNA polymerase-binding protein PGE45_06435 PF00535 Glycosyl transferase family 2 PGE45_06440 PF00795 Carbon-nitrogen hydrolase PGE45_06445 PF05661 Protein of unknown function (DUF808) PGE45_06450 PF08148 DSHCT (NUC185) domain PGE45_06450 PF00270 DEAD/DEAH box helicase PGE45_06450 PF00271 Helicase conserved C-terminal domain PGE45_06455 PF00781 Diacylglycerol kinase catalytic domain PGE45_06460 PF00902 Sec-independent protein translocase protein (TatC) PGE45_06465 PF02416 mttA/Hcf106 family PGE45_06485 PF07730 Histidine kinase PGE45_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_06490 PF00196 Bacterial regulatory proteins, luxR family PGE45_06490 PF00072 Response regulator receiver domain PGE45_06495 PF00005 ABC transporter PGE45_06515 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PGE45_06520 PF01634 ATP phosphoribosyltransferase PGE45_06520 PF08029 HisG, C-terminal domain PGE45_06525 PF09084 NMT1/THI5 like PGE45_06530 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_06535 PF00474 Sodium:solute symporter family PGE45_06540 PF01648 4'-phosphopantetheinyl transferase superfamily PGE45_06545 PF00109 Beta-ketoacyl synthase, N-terminal domain PGE45_06545 PF02801 Beta-ketoacyl synthase, C-terminal domain PGE45_06550 PF01039 Carboxyl transferase domain PGE45_06555 PF02785 Biotin carboxylase C-terminal domain PGE45_06555 PF00289 Biotin carboxylase, N-terminal domain PGE45_06555 PF00364 Biotin-requiring enzyme PGE45_06555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PGE45_06560 PF00834 Ribulose-phosphate 3 epimerase family PGE45_06565 PF01189 16S rRNA methyltransferase RsmB/F PGE45_06565 PF01029 NusB family PGE45_06570 PF00551 Formyl transferase PGE45_06570 PF02911 Formyl transferase, C-terminal domain PGE45_06585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PGE45_06585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PGE45_06590 PF00696 Amino acid kinase family PGE45_06605 PF00083 Sugar (and other) transporter PGE45_06605 PF08946 Osmosensory transporter coiled coil PGE45_06615 PF17764 3′ DNA-binding domain (3′BD) PGE45_06620 PF02773 S-adenosylmethionine synthetase, C-terminal domain PGE45_06620 PF00438 S-adenosylmethionine synthetase, N-terminal domain PGE45_06620 PF02772 S-adenosylmethionine synthetase, central domain PGE45_06625 PF02441 Flavoprotein PGE45_06625 PF04127 DNA / pantothenate metabolism flavoprotein PGE45_06630 PF01192 RNA polymerase Rpb6 PGE45_06635 PF00625 Guanylate kinase PGE45_06645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PGE45_06650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PGE45_06650 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PGE45_06650 PF02142 MGS-like domain PGE45_06655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PGE45_06655 PF00117 Glutamine amidotransferase class-I PGE45_06660 PF01979 Amidohydrolase family PGE45_06665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PGE45_06665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PGE45_06670 PF00156 Phosphoribosyl transferase domain PGE45_06695 PF01029 NusB family PGE45_06700 PF08207 Elongation factor P (EF-P) KOW-like domain PGE45_06700 PF01132 Elongation factor P (EF-P) OB domain PGE45_06700 PF09285 Elongation factor P, C-terminal PGE45_06705 PF01202 Shikimate kinase PGE45_06710 PF01761 3-dehydroquinate synthase PGE45_06715 PF01264 Chorismate synthase PGE45_06720 PF08501 Shikimate dehydrogenase substrate binding domain PGE45_06720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PGE45_06730 PF03652 Holliday junction resolvase PGE45_06735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PGE45_06735 PF01411 tRNA synthetases class II (A) PGE45_06735 PF02272 DHHA1 domain PGE45_06740 PF01479 S4 domain PGE45_06740 PF00163 Ribosomal protein S4/S9 N-terminal domain PGE45_06745 PF00004 ATPase family associated with various cellular activities (AAA) PGE45_06745 PF16193 AAA C-terminal domain PGE45_06745 PF12002 MgsA AAA+ ATPase C terminal PGE45_06750 PF01300 Telomere recombination PGE45_06770 PF13191 AAA ATPase domain PGE45_06770 PF00069 Protein kinase domain PGE45_06775 PF02938 GAD domain PGE45_06775 PF00152 tRNA synthetases class II (D, K and N) PGE45_06775 PF01336 OB-fold nucleic acid binding domain PGE45_06805 PF00005 ABC transporter PGE45_06810 PF03880 DbpA RNA binding domain PGE45_06810 PF00270 DEAD/DEAH box helicase PGE45_06810 PF00271 Helicase conserved C-terminal domain PGE45_06825 PF12631 MnmE helical domain PGE45_06825 PF10396 GTP-binding protein TrmE N-terminus PGE45_06825 PF01926 50S ribosome-binding GTPase PGE45_06835 PF03129 Anticodon binding domain PGE45_06835 PF13393 Histidyl-tRNA synthetase PGE45_06840 PF00753 Metallo-beta-lactamase superfamily PGE45_06845 PF00005 ABC transporter PGE45_06845 PF12848 ABC transporter PGE45_06850 PF03993 Domain of Unknown Function (DUF349) PGE45_06860 PF13411 MerR HTH family regulatory protein PGE45_06860 PF07739 TipAS antibiotic-recognition domain PGE45_06870 PF13291 ACT domain PGE45_06870 PF04607 Region found in RelA / SpoT proteins PGE45_06870 PF02824 TGS domain PGE45_06875 PF00156 Phosphoribosyl transferase domain PGE45_06880 PF07549 SecD/SecF GG Motif PGE45_06880 PF02355 Protein export membrane protein PGE45_06885 PF07549 SecD/SecF GG Motif PGE45_06885 PF02355 Protein export membrane protein PGE45_06895 PF17864 RuvB AAA lid domain PGE45_06895 PF05491 RuvB C-terminal winged helix domain PGE45_06895 PF05496 Holliday junction DNA helicase RuvB P-loop domain PGE45_06900 PF07499 RuvA, C-terminal domain PGE45_06900 PF01330 RuvA N terminal domain PGE45_06905 PF02075 Crossover junction endodeoxyribonuclease RuvC PGE45_06910 PF01709 Transcriptional regulator PGE45_06915 PF01174 SNO glutamine amidotransferase family PGE45_06920 PF00293 NUDIX domain PGE45_06925 PF01680 SOR/SNZ family PGE45_06940 PF13439 Glycosyltransferase Family 4 PGE45_06950 PF01066 CDP-alcohol phosphatidyltransferase PGE45_06955 PF01230 HIT domain PGE45_06960 PF03129 Anticodon binding domain PGE45_06960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PGE45_06960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PGE45_06985 PF00128 Alpha amylase, catalytic domain PGE45_06985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PGE45_06990 PF00128 Alpha amylase, catalytic domain PGE45_06995 PF00128 Alpha amylase, catalytic domain PGE45_06995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PGE45_07010 PF04055 Radical SAM superfamily PGE45_07015 PF02901 Pyruvate formate lyase-like PGE45_07015 PF01228 Glycine radical PGE45_07020 PF02901 Pyruvate formate lyase-like PGE45_07020 PF01228 Glycine radical PGE45_07025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PGE45_07025 PF02779 Transketolase, pyrimidine binding domain PGE45_07025 PF02780 Transketolase, C-terminal domain PGE45_07030 PF12146 Serine aminopeptidase, S33 PGE45_07035 PF00654 Voltage gated chloride channel PGE45_07045 PF02789 Cytosol aminopeptidase family, N-terminal domain PGE45_07045 PF00883 Cytosol aminopeptidase family, catalytic domain PGE45_07050 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGE45_07050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PGE45_07055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PGE45_07055 PF00364 Biotin-requiring enzyme PGE45_07055 PF02817 e3 binding domain PGE45_07075 PF00970 Oxidoreductase FAD-binding domain PGE45_07075 PF00111 2Fe-2S iron-sulfur cluster binding domain PGE45_07075 PF00175 Oxidoreductase NAD-binding domain PGE45_07085 PF03099 Biotin/lipoate A/B protein ligase family PGE45_07090 PF04055 Radical SAM superfamily PGE45_07090 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PGE45_07100 PF00120 Glutamine synthetase, catalytic domain PGE45_07100 PF03951 Glutamine synthetase, beta-Grasp domain PGE45_07110 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_07115 PF00005 ABC transporter PGE45_07135 PF02423 Ornithine cyclodeaminase/mu-crystallin family PGE45_07140 PF00005 ABC transporter PGE45_07140 PF13732 Domain of unknown function (DUF4162) PGE45_07170 PF08335 GlnD PII-uridylyltransferase PGE45_07170 PF03710 Glutamate-ammonia ligase adenylyltransferase PGE45_07175 PF00120 Glutamine synthetase, catalytic domain PGE45_07175 PF03951 Glutamine synthetase, beta-Grasp domain PGE45_07180 PF02548 Ketopantoate hydroxymethyltransferase PGE45_07185 PF00557 Metallopeptidase family M24 PGE45_07200 PF03883 Peroxide stress protein YaaA PGE45_07210 PF01784 NIF3 (NGG1p interacting factor 3) PGE45_07230 PF00155 Aminotransferase class I and II PGE45_07280 PF00239 Resolvase, N terminal domain PGE45_07280 PF02796 Helix-turn-helix domain of resolvase PGE45_07295 PF17831 Pyruvate dehydrogenase E1 component middle domain PGE45_07295 PF00456 Transketolase, thiamine diphosphate binding domain PGE45_07305 PF10415 Fumarase C C-terminus PGE45_07305 PF00206 Lyase PGE45_07310 PF17853 GGDEF-like domain PGE45_07310 PF13556 PucR C-terminal helix-turn-helix domain PGE45_07315 PF00550 Phosphopantetheine attachment site PGE45_07320 PF00109 Beta-ketoacyl synthase, N-terminal domain PGE45_07320 PF02801 Beta-ketoacyl synthase, C-terminal domain PGE45_07330 PF01327 Polypeptide deformylase PGE45_07345 PF08278 DNA primase DnaG DnaB-binding PGE45_07345 PF13662 Toprim domain PGE45_07345 PF08275 DNA primase catalytic core, N-terminal domain PGE45_07345 PF01807 CHC2 zinc finger PGE45_07345 PF10410 DnaB-helicase binding domain of primase PGE45_07350 PF01966 HD domain PGE45_07350 PF13286 Phosphohydrolase-associated domain PGE45_07360 PF13416 Bacterial extracellular solute-binding protein PGE45_07365 PF14785 Maltose transport system permease protein MalF P2 domain PGE45_07365 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_07370 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_07375 PF00356 Bacterial regulatory proteins, lacI family PGE45_07385 PF01546 Peptidase family M20/M25/M40 PGE45_07385 PF07687 Peptidase dimerisation domain PGE45_07390 PF11241 Protein of unknown function (DUF3043) PGE45_07395 PF01180 Dihydroorotate dehydrogenase PGE45_07400 PF04228 Putative neutral zinc metallopeptidase PGE45_07430 PF02675 S-adenosylmethionine decarboxylase PGE45_07445 PF04343 Protein of unknown function, DUF488 PGE45_07450 PF01883 Iron-sulfur cluster assembly protein PGE45_07455 PF01592 NifU-like N terminal domain PGE45_07460 PF00266 Aminotransferase class-V PGE45_07465 PF00005 ABC transporter PGE45_07470 PF01458 Uncharacterized protein family (UPF0051) PGE45_07475 PF01458 Uncharacterized protein family (UPF0051) PGE45_07485 PF00293 NUDIX domain PGE45_07505 PF11382 Copper transport outer membrane protein, MctB PGE45_07515 PF02463 RecF/RecN/SMC N terminal domain PGE45_07520 PF01513 ATP-NAD kinase PGE45_07525 PF01728 FtsJ-like methyltransferase PGE45_07525 PF01479 S4 domain PGE45_07535 PF13344 Haloacid dehalogenase-like hydrolase PGE45_07565 PF00579 tRNA synthetases class I (W and Y) PGE45_07585 PF02245 Methylpurine-DNA glycosylase (MPG) PGE45_07590 PF14698 Argininosuccinate lyase C-terminal PGE45_07590 PF00206 Lyase PGE45_07595 PF01226 Formate/nitrite transporter PGE45_07600 PF00764 Arginosuccinate synthase PGE45_07605 PF02863 Arginine repressor, C-terminal domain PGE45_07605 PF01316 Arginine repressor, DNA binding domain PGE45_07610 PF00202 Aminotransferase class-III PGE45_07615 PF00696 Amino acid kinase family PGE45_07620 PF01960 ArgJ family PGE45_07625 PF01118 Semialdehyde dehydrogenase, NAD binding domain PGE45_07625 PF02774 Semialdehyde dehydrogenase, dimerisation domain PGE45_07635 PF03483 B3/4 domain PGE45_07635 PF03484 tRNA synthetase B5 domain PGE45_07635 PF01588 Putative tRNA binding domain PGE45_07635 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PGE45_07635 PF03147 Ferredoxin-fold anticodon binding domain PGE45_07640 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PGE45_07640 PF01409 tRNA synthetases class II core domain (F) PGE45_07650 PF00005 ABC transporter PGE45_07650 PF13732 Domain of unknown function (DUF4162) PGE45_07665 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_07670 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_07675 PF00497 Bacterial extracellular solute-binding proteins, family 3 PGE45_07680 PF00005 ABC transporter PGE45_07690 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase PGE45_07695 PF00588 SpoU rRNA Methylase family PGE45_07695 PF08032 RNA 2'-O ribose methyltransferase substrate binding PGE45_07700 PF00453 Ribosomal protein L20 PGE45_07705 PF01632 Ribosomal protein L35 PGE45_07710 PF00707 Translation initiation factor IF-3, C-terminal domain PGE45_07710 PF05198 Translation initiation factor IF-3, N-terminal domain PGE45_07720 PF00005 ABC transporter PGE45_07735 PF00977 Histidine biosynthesis protein PGE45_07740 PF00117 Glutamine amidotransferase class-I PGE45_07745 PF13191 AAA ATPase domain PGE45_07745 PF00069 Protein kinase domain PGE45_07755 PF00475 Imidazoleglycerol-phosphate dehydratase PGE45_07760 PF00155 Aminotransferase class I and II PGE45_07765 PF00999 Sodium/hydrogen exchanger family PGE45_07770 PF00270 DEAD/DEAH box helicase PGE45_07770 PF00271 Helicase conserved C-terminal domain PGE45_07770 PF00570 HRDC domain PGE45_07770 PF16124 RecQ zinc-binding PGE45_07770 PF09382 RQC domain PGE45_07785 PF02350 UDP-N-acetylglucosamine 2-epimerase PGE45_07795 PF00535 Glycosyl transferase family 2 PGE45_07805 PF00815 Histidinol dehydrogenase PGE45_07810 PF08267 Cobalamin-independent synthase, N-terminal domain PGE45_07810 PF01717 Cobalamin-independent synthase, Catalytic domain PGE45_07815 PF02219 Methylenetetrahydrofolate reductase PGE45_07835 PF02028 BCCT, betaine/carnitine/choline family transporter PGE45_07840 PF14579 Helix-hairpin-helix motif PGE45_07840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PGE45_07840 PF02811 PHP domain PGE45_07840 PF07733 Bacterial DNA polymerase III alpha NTPase domain PGE45_07845 PF02558 Ketopantoate reductase PanE/ApbA PGE45_07845 PF08546 Ketopantoate reductase PanE/ApbA C terminal PGE45_07855 PF00849 RNA pseudouridylate synthase PGE45_07860 PF01252 Signal peptidase (SPase) II PGE45_07865 PF05103 DivIVA protein PGE45_07875 PF04472 Cell division protein SepF PGE45_07880 PF02578 Multi-copper polyphenol oxidoreductase laccase PGE45_07885 PF00091 Tubulin/FtsZ family, GTPase domain PGE45_07885 PF12327 FtsZ family, C-terminal domain PGE45_07895 PF01225 Mur ligase family, catalytic domain PGE45_07895 PF02875 Mur ligase family, glutamate ligase domain PGE45_07895 PF08245 Mur ligase middle domain PGE45_07900 PF04101 Glycosyltransferase family 28 C-terminal domain PGE45_07900 PF03033 Glycosyltransferase family 28 N-terminal domain PGE45_07905 PF01098 Cell cycle protein PGE45_07910 PF02875 Mur ligase family, glutamate ligase domain PGE45_07910 PF08245 Mur ligase middle domain PGE45_07915 PF00953 Glycosyl transferase family 4 PGE45_07915 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PGE45_07920 PF08245 Mur ligase middle domain PGE45_07920 PF02875 Mur ligase family, glutamate ligase domain PGE45_07920 PF01225 Mur ligase family, catalytic domain PGE45_07925 PF08245 Mur ligase middle domain PGE45_07925 PF01225 Mur ligase family, catalytic domain PGE45_07925 PF02875 Mur ligase family, glutamate ligase domain PGE45_07930 PF03717 Penicillin-binding Protein dimerisation domain PGE45_07930 PF00905 Penicillin binding protein transpeptidase domain PGE45_07940 PF01795 MraW methylase family PGE45_07945 PF02381 MraZ protein, putative antitoxin-like PGE45_07955 PF00817 impB/mucB/samB family PGE45_07955 PF11799 impB/mucB/samB family C-terminal domain PGE45_07975 PF13193 AMP-binding enzyme C-terminal domain PGE45_07975 PF00501 AMP-binding enzyme PGE45_07980 PF13193 AMP-binding enzyme C-terminal domain PGE45_07980 PF00501 AMP-binding enzyme PGE45_07990 PF00701 Dihydrodipicolinate synthetase family PGE45_08000 PF05173 Dihydrodipicolinate reductase, C-terminus PGE45_08000 PF01113 Dihydrodipicolinate reductase, N-terminus PGE45_08005 PF00106 short chain dehydrogenase PGE45_08010 PF00675 Insulinase (Peptidase family M16) PGE45_08010 PF05193 Peptidase M16 inactive domain PGE45_08015 PF00575 S1 RNA binding domain PGE45_08015 PF01138 3' exoribonuclease family, domain 1 PGE45_08015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PGE45_08015 PF00013 KH domain PGE45_08020 PF00465 Iron-containing alcohol dehydrogenase PGE45_08025 PF00312 Ribosomal protein S15 PGE45_08030 PF06574 FAD synthetase PGE45_08030 PF01687 Riboflavin kinase PGE45_08040 PF00005 ABC transporter PGE45_08040 PF12704 MacB-like periplasmic core domain PGE45_08040 PF02687 FtsX-like permease family PGE45_08050 PF01509 TruB family pseudouridylate synthase (N terminal domain) PGE45_08050 PF16198 tRNA pseudouridylate synthase B C-terminal domain PGE45_08050 PF09142 tRNA Pseudouridine synthase II, C terminal PGE45_08055 PF02033 Ribosome-binding factor A PGE45_08060 PF00892 EamA-like transporter family PGE45_08065 PF01145 SPFH domain / Band 7 family PGE45_08065 PF16200 C-terminal region of band_7 PGE45_08080 PF00174 Oxidoreductase molybdopterin binding domain PGE45_08085 PF00009 Elongation factor Tu GTP binding domain PGE45_08085 PF11987 Translation-initiation factor 2 PGE45_08085 PF04760 Translation initiation factor IF-2, N-terminal region PGE45_08095 PF13184 NusA-like KH domain PGE45_08095 PF08529 NusA N-terminal domain PGE45_08100 PF02576 RimP N-terminal domain PGE45_08100 PF17384 RimP C-terminal SH3 domain PGE45_08120 PF04073 Aminoacyl-tRNA editing domain PGE45_08120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PGE45_08120 PF03129 Anticodon binding domain PGE45_08125 PF10509 Galactokinase galactose-binding signature PGE45_08125 PF08544 GHMP kinases C terminal PGE45_08125 PF00288 GHMP kinases N terminal domain PGE45_08135 PF00288 GHMP kinases N terminal domain PGE45_08135 PF08544 GHMP kinases C terminal PGE45_08140 PF01070 FMN-dependent dehydrogenase PGE45_08155 PF00583 Acetyltransferase (GNAT) family PGE45_08160 PF04551 GcpE protein PGE45_08165 PF02163 Peptidase family M50 PGE45_08165 PF17820 PDZ domain PGE45_08170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PGE45_08170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PGE45_08170 PF13288 DXP reductoisomerase C-terminal domain PGE45_08180 PF04055 Radical SAM superfamily PGE45_08190 PF01765 Ribosome recycling factor PGE45_08195 PF00696 Amino acid kinase family PGE45_08200 PF00889 Elongation factor TS PGE45_08205 PF00318 Ribosomal protein S2 PGE45_08210 PF01551 Peptidase family M23 PGE45_08215 PF02899 Phage integrase, N-terminal SAM-like domain PGE45_08215 PF00589 Phage integrase family PGE45_08225 PF12773 Double zinc ribbon PGE45_08225 PF00498 FHA domain PGE45_08230 PF13191 AAA ATPase domain PGE45_08230 PF00069 Protein kinase domain PGE45_08235 PF17782 DprA winged helix domain PGE45_08235 PF02481 DNA recombination-mediator protein A PGE45_08240 PF13335 Magnesium chelatase, subunit ChlI C-terminal PGE45_08240 PF01078 Magnesium chelatase, subunit ChlI PGE45_08245 PF02021 Uncharacterised protein family UPF0102 PGE45_08250 PF10611 Protein of unknown function (DUF2469) PGE45_08255 PF01351 Ribonuclease HII PGE45_08260 PF10502 Signal peptidase, peptidase S26 PGE45_08265 PF01245 Ribosomal protein L19 PGE45_08270 PF10502 Signal peptidase, peptidase S26 PGE45_08275 PF01746 tRNA (Guanine-1)-methyltransferase PGE45_08280 PF01782 RimM N-terminal domain PGE45_08280 PF05239 PRC-barrel domain PGE45_08290 PF00886 Ribosomal protein S16 PGE45_08305 PF00005 ABC transporter PGE45_08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_08315 PF07730 Histidine kinase PGE45_08320 PF00196 Bacterial regulatory proteins, luxR family PGE45_08320 PF00072 Response regulator receiver domain PGE45_08325 PF00448 SRP54-type protein, GTPase domain PGE45_08325 PF02881 SRP54-type protein, helical bundle domain PGE45_08325 PF02978 Signal peptide binding domain PGE45_08330 PF00005 ABC transporter PGE45_08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_08340 PF07730 Histidine kinase PGE45_08345 PF00072 Response regulator receiver domain PGE45_08345 PF00196 Bacterial regulatory proteins, luxR family PGE45_08350 PF00448 SRP54-type protein, GTPase domain PGE45_08350 PF02881 SRP54-type protein, helical bundle domain PGE45_08360 PF06470 SMC proteins Flexible Hinge Domain PGE45_08360 PF02463 RecF/RecN/SMC N terminal domain PGE45_08365 PF00005 ABC transporter PGE45_08365 PF13732 Domain of unknown function (DUF4162) PGE45_08375 PF00334 Nucleoside diphosphate kinase PGE45_08380 PF02734 DAK2 domain PGE45_08385 PF02875 Mur ligase family, glutamate ligase domain PGE45_08385 PF08245 Mur ligase middle domain PGE45_08390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PGE45_08390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PGE45_08390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PGE45_08420 PF13439 Glycosyltransferase Family 4 PGE45_08420 PF00534 Glycosyl transferases group 1 PGE45_08425 PF00535 Glycosyl transferase family 2 PGE45_08430 PF02397 Bacterial sugar transferase PGE45_08435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PGE45_08440 PF02719 Polysaccharide biosynthesis protein PGE45_08445 PF02706 Chain length determinant protein PGE45_08445 PF13807 G-rich domain on putative tyrosine kinase PGE45_08445 PF13614 AAA domain PGE45_08455 PF08264 Anticodon-binding domain of tRNA PGE45_08455 PF00133 tRNA synthetases class I (I, L, M and V) PGE45_08460 PF00248 Aldo/keto reductase family PGE45_08470 PF00106 short chain dehydrogenase PGE45_08475 PF03553 Na+/H+ antiporter family PGE45_08475 PF13726 Na+-H+ antiporter family PGE45_08480 PF03807 NADP oxidoreductase coenzyme F420-dependent PGE45_08480 PF14748 Pyrroline-5-carboxylate reductase dimerisation PGE45_08485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PGE45_08485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PGE45_08490 PF01507 Phosphoadenosine phosphosulfate reductase family PGE45_08495 PF01507 Phosphoadenosine phosphosulfate reductase family PGE45_08500 PF00009 Elongation factor Tu GTP binding domain PGE45_08505 PF10414 Sirohaem synthase dimerisation region PGE45_08505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGE45_08505 PF14824 Sirohaem biosynthesis protein central PGE45_08510 PF01925 Sulfite exporter TauE/SafE PGE45_08530 PF00005 ABC transporter PGE45_08530 PF13732 Domain of unknown function (DUF4162) PGE45_08535 PF00005 ABC transporter PGE45_08540 PF00664 ABC transporter transmembrane region PGE45_08540 PF00005 ABC transporter PGE45_08540 PF08021 Siderophore-interacting FAD-binding domain PGE45_08540 PF04954 Siderophore-interacting protein PGE45_08545 PF00005 ABC transporter PGE45_08555 PF00005 ABC transporter PGE45_08570 PF03136 Pup-ligase protein PGE45_08575 PF05639 Pup-like protein PGE45_08580 PF03136 Pup-ligase protein PGE45_08585 PF00004 ATPase family associated with various cellular activities (AAA) PGE45_08585 PF17758 Proteasomal ATPase OB N-terminal domain PGE45_08585 PF16450 Proteasomal ATPase OB C-terminal domain PGE45_08590 PF08264 Anticodon-binding domain of tRNA PGE45_08590 PF00133 tRNA synthetases class I (I, L, M and V) PGE45_08600 PF00356 Bacterial regulatory proteins, lacI family PGE45_08605 PF00128 Alpha amylase, catalytic domain PGE45_08610 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_08615 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_08620 PF01547 Bacterial extracellular solute-binding protein PGE45_08625 PF00501 AMP-binding enzyme PGE45_08630 PF00501 AMP-binding enzyme PGE45_08635 PF02153 Prephenate dehydrogenase PGE45_08635 PF01817 Chorismate mutase type II PGE45_08640 PF07724 AAA domain (Cdc48 subfamily) PGE45_08640 PF10431 C-terminal, D2-small domain, of ClpB protein PGE45_08640 PF06689 ClpX C4-type zinc finger PGE45_08645 PF00574 Clp protease PGE45_08650 PF00574 Clp protease PGE45_08665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PGE45_08665 PF05698 Bacterial trigger factor protein (TF) C-terminus PGE45_08665 PF05697 Bacterial trigger factor protein (TF) PGE45_08680 PF01783 Ribosomal L32p protein family PGE45_08685 PF09186 Domain of unknown function (DUF1949) PGE45_08685 PF01205 Uncharacterized protein family UPF0029 PGE45_08690 PF00291 Pyridoxal-phosphate dependent enzyme PGE45_08695 PF00132 Bacterial transferase hexapeptide (six repeats) PGE45_08700 PF00561 alpha/beta hydrolase fold PGE45_08705 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PGE45_08705 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PGE45_08705 PF06827 Zinc finger found in FPG and IleRS PGE45_08710 PF02502 Ribose/Galactose Isomerase PGE45_08715 PF05649 Peptidase family M13 PGE45_08715 PF01431 Peptidase family M13 PGE45_08735 PF01433 Peptidase family M1 domain PGE45_08735 PF11838 ERAP1-like C-terminal domain PGE45_08740 PF02378 Phosphotransferase system, EIIC PGE45_08745 PF00392 Bacterial regulatory proteins, gntR family PGE45_08745 PF07702 UTRA domain PGE45_08750 PF00367 phosphotransferase system, EIIB PGE45_08755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PGE45_08755 PF00367 phosphotransferase system, EIIB PGE45_08755 PF02378 Phosphotransferase system, EIIC PGE45_08760 PF02446 4-alpha-glucanotransferase PGE45_08765 PF00367 phosphotransferase system, EIIB PGE45_08770 PF05524 PEP-utilising enzyme, N-terminal PGE45_08770 PF00391 PEP-utilising enzyme, mobile domain PGE45_08770 PF02896 PEP-utilising enzyme, TIM barrel domain PGE45_08785 PF12848 ABC transporter PGE45_08785 PF00005 ABC transporter PGE45_08790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PGE45_08790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PGE45_08800 PF03462 PCRF domain PGE45_08800 PF00472 RF-1 domain PGE45_08805 PF03466 LysR substrate binding domain PGE45_08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PGE45_08845 PF00437 Type II/IV secretion system protein PGE45_08855 PF00580 UvrD/REP helicase N-terminal domain PGE45_08855 PF13361 UvrD-like helicase C-terminal domain PGE45_08875 PF02146 Sir2 family PGE45_08880 PF03976 Polyphosphate kinase 2 (PPK2) PGE45_08890 PF03699 Uncharacterised protein family (UPF0182) PGE45_08905 PF13180 PDZ domain PGE45_08905 PF05362 Lon protease (S16) C-terminal proteolytic domain PGE45_08915 PF00580 UvrD/REP helicase N-terminal domain PGE45_08915 PF13361 UvrD-like helicase C-terminal domain PGE45_08915 PF00570 HRDC domain PGE45_08920 PF00293 NUDIX domain PGE45_08920 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PGE45_08920 PF09297 NADH pyrophosphatase zinc ribbon domain PGE45_08925 PF00266 Aminotransferase class-V PGE45_08930 PF09827 CRISPR associated protein Cas2 PGE45_08970 PF02661 Fic/DOC family PGE45_08970 PF12728 Helix-turn-helix domain PGE45_08985 PF01012 Electron transfer flavoprotein domain PGE45_08985 PF00766 Electron transfer flavoprotein FAD-binding domain PGE45_08990 PF01012 Electron transfer flavoprotein domain PGE45_08995 PF00128 Alpha amylase, catalytic domain PGE45_08995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PGE45_09020 PF00579 tRNA synthetases class I (W and Y) PGE45_09025 PF00128 Alpha amylase, catalytic domain PGE45_09025 PF11896 Domain of unknown function (DUF3416) PGE45_09035 PF18085 Maltokinase N-terminal cap domain PGE45_09035 PF01636 Phosphotransferase enzyme family PGE45_09040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PGE45_09040 PF00128 Alpha amylase, catalytic domain PGE45_09040 PF02806 Alpha amylase, C-terminal all-beta domain PGE45_09045 PF00343 Carbohydrate phosphorylase PGE45_09050 PF00085 Thioredoxin PGE45_09080 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_09085 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_09090 PF01547 Bacterial extracellular solute-binding protein PGE45_09095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PGE45_09095 PF00056 lactate/malate dehydrogenase, NAD binding domain PGE45_09100 PF00005 ABC transporter PGE45_09100 PF00664 ABC transporter transmembrane region PGE45_09105 PF00664 ABC transporter transmembrane region PGE45_09105 PF00005 ABC transporter PGE45_09110 PF00375 Sodium:dicarboxylate symporter family PGE45_09120 PF01808 AICARFT/IMPCHase bienzyme PGE45_09120 PF02142 MGS-like domain PGE45_09135 PF00549 CoA-ligase PGE45_09135 PF02629 CoA binding domain PGE45_09140 PF08442 ATP-grasp domain PGE45_09140 PF00549 CoA-ligase PGE45_09150 PF00365 Phosphofructokinase PGE45_09155 PF00654 Voltage gated chloride channel PGE45_09170 PF00128 Alpha amylase, catalytic domain PGE45_09175 PF17137 Domain of unknown function (DUF5110) PGE45_09175 PF13802 Galactose mutarotase-like PGE45_09175 PF01055 Glycosyl hydrolases family 31 PGE45_09175 PF16338 Domain of unknown function (DUF4968) PGE45_09180 PF14602 Hexapeptide repeat of succinyl-transferase PGE45_09180 PF12464 Maltose acetyltransferase PGE45_09185 PF00881 Nitroreductase family PGE45_09195 PF00580 UvrD/REP helicase N-terminal domain PGE45_09195 PF13361 UvrD-like helicase C-terminal domain PGE45_09205 PF08240 Alcohol dehydrogenase GroES-like domain PGE45_09205 PF00107 Zinc-binding dehydrogenase PGE45_09210 PF01047 MarR family PGE45_09215 PF17827 PrmC N-terminal domain PGE45_09220 PF00472 RF-1 domain PGE45_09220 PF03462 PCRF domain PGE45_09225 PF01197 Ribosomal protein L31 PGE45_09230 PF07497 Rho termination factor, RNA-binding domain PGE45_09230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PGE45_09230 PF07498 Rho termination factor, N-terminal domain PGE45_09235 PF03358 NADPH-dependent FMN reductase PGE45_09240 PF00296 Luciferase-like monooxygenase PGE45_09245 PF00288 GHMP kinases N terminal domain PGE45_09250 PF01842 ACT domain PGE45_09250 PF00742 Homoserine dehydrogenase PGE45_09250 PF03447 Homoserine dehydrogenase, NAD binding domain PGE45_09265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PGE45_09265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PGE45_09270 PF03485 Arginyl tRNA synthetase N terminal domain PGE45_09270 PF05746 DALR anticodon binding domain PGE45_09270 PF00750 tRNA synthetases class I (R) PGE45_09310 PF00877 NlpC/P60 family PGE45_09350 PF00462 Glutaredoxin PGE45_09370 PF01443 Viral (Superfamily 1) RNA helicase PGE45_09370 PF03389 MobA/MobL family PGE45_09370 PF17841 BID domain of Bartonella effector protein (Bep) PGE45_09400 PF13614 AAA domain PGE45_09405 PF00589 Phage integrase family PGE45_09405 PF02899 Phage integrase, N-terminal SAM-like domain PGE45_09460 PF02796 Helix-turn-helix domain of resolvase PGE45_09460 PF00239 Resolvase, N terminal domain PGE45_09485 PF00436 Single-strand binding protein family PGE45_09520 PF01551 Peptidase family M23 PGE45_09520 PF08525 Opacity-associated protein A N-terminal motif PGE45_09520 PF01476 LysM domain PGE45_09525 PF01595 Cyclin M transmembrane N-terminal domain PGE45_09525 PF00571 CBS domain PGE45_09530 PF00571 CBS domain PGE45_09530 PF03471 Transporter associated domain PGE45_09530 PF01595 Cyclin M transmembrane N-terminal domain PGE45_09545 PF02779 Transketolase, pyrimidine binding domain PGE45_09545 PF00676 Dehydrogenase E1 component PGE45_09545 PF16078 2-oxoglutarate dehydrogenase N-terminus PGE45_09545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PGE45_09545 PF16870 2-oxoglutarate dehydrogenase C-terminal PGE45_09565 PF04542 Sigma-70 region 2 PGE45_09565 PF08281 Sigma-70, region 4 PGE45_09575 PF03971 Monomeric isocitrate dehydrogenase PGE45_09580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PGE45_09585 PF03193 RsgA GTPase PGE45_09595 PF07732 Multicopper oxidase PGE45_09615 PF06463 Molybdenum Cofactor Synthesis C PGE45_09615 PF04055 Radical SAM superfamily PGE45_09625 PF02391 MoaE protein PGE45_09630 PF03453 MoeA N-terminal region (domain I and II) PGE45_09630 PF03454 MoeA C-terminal region (domain IV) PGE45_09630 PF00994 Probable molybdopterin binding domain PGE45_09635 PF01967 MoaC family PGE45_09645 PF01967 MoaC family PGE45_09645 PF00994 Probable molybdopterin binding domain PGE45_09650 PF07690 Major Facilitator Superfamily PGE45_09655 PF00384 Molybdopterin oxidoreductase PGE45_09655 PF01568 Molydopterin dinucleotide binding domain PGE45_09660 PF13247 4Fe-4S dicluster domain PGE45_09660 PF14711 Respiratory nitrate reductase beta C-terminal PGE45_09670 PF00384 Molybdopterin oxidoreductase PGE45_09670 PF02613 Nitrate reductase delta subunit PGE45_09670 PF02665 Nitrate reductase gamma subunit PGE45_09680 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_09685 PF00899 ThiF family PGE45_09705 PF00107 Zinc-binding dehydrogenase PGE45_09705 PF13823 Alcohol dehydrogenase GroES-associated PGE45_09705 PF08240 Alcohol dehydrogenase GroES-like domain PGE45_09710 PF02525 Flavodoxin-like fold PGE45_09715 PF00583 Acetyltransferase (GNAT) family PGE45_09720 PF02525 Flavodoxin-like fold PGE45_09725 PF00459 Inositol monophosphatase family PGE45_09735 PF02673 Bacitracin resistance protein BacA PGE45_09755 PF00149 Calcineurin-like phosphoesterase PGE45_09755 PF12320 Type 5 capsule protein repressor C-terminal domain PGE45_09760 PF13476 AAA domain PGE45_09775 PF02449 Beta-galactosidase PGE45_09775 PF08533 Beta-galactosidase C-terminal domain PGE45_09775 PF08532 Beta-galactosidase trimerisation domain PGE45_09780 PF00754 F5/8 type C domain PGE45_09780 PF02973 Sialidase, N-terminal domain PGE45_09780 PF13088 BNR repeat-like domain PGE45_09790 PF00623 RNA polymerase Rpb1, domain 2 PGE45_09790 PF04983 RNA polymerase Rpb1, domain 3 PGE45_09790 PF04997 RNA polymerase Rpb1, domain 1 PGE45_09790 PF05000 RNA polymerase Rpb1, domain 4 PGE45_09790 PF04998 RNA polymerase Rpb1, domain 5 PGE45_09795 PF00562 RNA polymerase Rpb2, domain 6 PGE45_09795 PF10385 RNA polymerase beta subunit external 1 domain PGE45_09795 PF04565 RNA polymerase Rpb2, domain 3 PGE45_09795 PF04560 RNA polymerase Rpb2, domain 7 PGE45_09795 PF04563 RNA polymerase beta subunit PGE45_09795 PF04561 RNA polymerase Rpb2, domain 2 PGE45_09810 PF00542 Ribosomal protein L7/L12 C-terminal domain PGE45_09810 PF16320 Ribosomal protein L7/L12 dimerisation domain PGE45_09815 PF00466 Ribosomal protein L10 PGE45_09855 PF01043 SecA preprotein cross-linking domain PGE45_09855 PF07516 SecA Wing and Scaffold domain PGE45_09855 PF07517 SecA DEAD-like domain PGE45_09860 PF00156 Phosphoribosyl transferase domain PGE45_09865 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus PGE45_09865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PGE45_09870 PF10646 Sporulation and spore germination PGE45_09870 PF10647 Lipoprotein LpqB beta-propeller domain PGE45_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_09875 PF00672 HAMP domain PGE45_09875 PF00512 His Kinase A (phospho-acceptor) domain PGE45_09880 PF00486 Transcriptional regulatory protein, C terminal PGE45_09880 PF00072 Response regulator receiver domain PGE45_09900 PF07726 ATPase family associated with various cellular activities (AAA) PGE45_09900 PF17863 AAA lid domain PGE45_09905 PF01882 Protein of unknown function DUF58 PGE45_09920 PF03966 Trm112p-like protein PGE45_09945 PF02467 Transcription factor WhiB PGE45_09955 PF01238 Phosphomannose isomerase type I PGE45_09960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PGE45_09965 PF00483 Nucleotidyl transferase PGE45_09975 PF04321 RmlD substrate binding domain PGE45_09980 PF13477 Glycosyl transferase 4-like PGE45_09980 PF00534 Glycosyl transferases group 1 PGE45_09985 PF13439 Glycosyltransferase Family 4 PGE45_09985 PF00534 Glycosyl transferases group 1 PGE45_09995 PF00535 Glycosyl transferase family 2 PGE45_10000 PF00005 ABC transporter PGE45_10000 PF14524 Wzt C-terminal domain PGE45_10010 PF01370 NAD dependent epimerase/dehydratase family PGE45_10025 PF01370 NAD dependent epimerase/dehydratase family PGE45_10040 PF00535 Glycosyl transferase family 2 PGE45_10055 PF16363 GDP-mannose 4,6 dehydratase PGE45_10070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PGE45_10070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PGE45_10070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PGE45_10085 PF00534 Glycosyl transferases group 1 PGE45_10085 PF13439 Glycosyltransferase Family 4 PGE45_10095 PF02350 UDP-N-acetylglucosamine 2-epimerase PGE45_10100 PF00534 Glycosyl transferases group 1 PGE45_10100 PF13579 Glycosyl transferase 4-like domain PGE45_10115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PGE45_10120 PF12804 MobA-like NTP transferase domain PGE45_10120 PF00132 Bacterial transferase hexapeptide (six repeats) PGE45_10125 PF00534 Glycosyl transferases group 1 PGE45_10125 PF13439 Glycosyltransferase Family 4 PGE45_10150 PF03816 Cell envelope-related transcriptional attenuator domain PGE45_10155 PF01370 NAD dependent epimerase/dehydratase family PGE45_10160 PF00731 AIR carboxylase PGE45_10165 PF02222 ATP-grasp domain PGE45_10165 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PGE45_10180 PF09335 SNARE associated Golgi protein PGE45_10185 PF00672 HAMP domain PGE45_10185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_10185 PF00512 His Kinase A (phospho-acceptor) domain PGE45_10185 PF13426 PAS domain PGE45_10190 PF00072 Response regulator receiver domain PGE45_10190 PF00486 Transcriptional regulatory protein, C terminal PGE45_10195 PF00211 Adenylate and Guanylate cyclase catalytic domain PGE45_10195 PF16701 Adenylate cyclase regulatory domain PGE45_10205 PF02545 Maf-like protein PGE45_10220 PF00471 Ribosomal protein L33 PGE45_10240 PF04461 Protein of unknown function (DUF520) PGE45_10245 PF00072 Response regulator receiver domain PGE45_10245 PF00196 Bacterial regulatory proteins, luxR family PGE45_10250 PF05384 Sensor protein DegS PGE45_10250 PF07730 Histidine kinase PGE45_10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_10265 PF01435 Peptidase family M48 PGE45_10280 PF12399 Branched-chain amino acid ATP-binding cassette transporter PGE45_10280 PF00005 ABC transporter PGE45_10290 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGE45_10305 PF00348 Polyprenyl synthetase PGE45_10310 PF00361 Proton-conducting membrane transporter PGE45_10315 PF00361 Proton-conducting membrane transporter PGE45_10320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PGE45_10320 PF00361 Proton-conducting membrane transporter PGE45_10325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PGE45_10335 PF12838 4Fe-4S dicluster domain PGE45_10340 PF00146 NADH dehydrogenase PGE45_10345 PF01568 Molydopterin dinucleotide binding domain PGE45_10345 PF00384 Molybdopterin oxidoreductase PGE45_10345 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PGE45_10350 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PGE45_10350 PF10531 SLBB domain PGE45_10350 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PGE45_10360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PGE45_10365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PGE45_10370 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PGE45_10375 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PGE45_10380 PF01494 FAD binding domain PGE45_10385 PF01209 ubiE/COQ5 methyltransferase family PGE45_10390 PF00425 chorismate binding enzyme PGE45_10405 PF13180 PDZ domain PGE45_10410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PGE45_10410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PGE45_10415 PF18374 Enolase N-terminal domain-like PGE45_10415 PF13378 Enolase C-terminal domain-like PGE45_10435 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_10440 PF00005 ABC transporter PGE45_10440 PF00571 CBS domain PGE45_10445 PF00480 ROK family PGE45_10445 PF01325 Iron dependent repressor, N-terminal DNA binding domain PGE45_10450 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain PGE45_10450 PF17385 Lacto-N-biose phosphorylase central domain PGE45_10450 PF17386 Lacto-N-biose phosphorylase C-terminal domain PGE45_10460 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_10465 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_10470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGE45_10470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGE45_10470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGE45_10470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGE45_10480 PF00288 GHMP kinases N terminal domain PGE45_10480 PF10509 Galactokinase galactose-binding signature PGE45_10480 PF08544 GHMP kinases C terminal PGE45_10500 PF00196 Bacterial regulatory proteins, luxR family PGE45_10500 PF00072 Response regulator receiver domain PGE45_10505 PF00378 Enoyl-CoA hydratase/isomerase PGE45_10510 PF10099 Anti-sigma-K factor rskA PGE45_10515 PF04545 Sigma-70, region 4 PGE45_10515 PF04542 Sigma-70 region 2 PGE45_10520 PF00578 AhpC/TSA family PGE45_10520 PF02683 Cytochrome C biogenesis protein transmembrane region PGE45_10520 PF17991 Thioredoxin like C-terminal domain PGE45_10530 PF07274 Protein of unknown function (DUF1440) PGE45_10540 PF01040 UbiA prenyltransferase family PGE45_10545 PF03747 ADP-ribosylglycohydrolase PGE45_10550 PF01467 Cytidylyltransferase-like PGE45_10550 PF00294 pfkB family carbohydrate kinase PGE45_10555 PF00501 AMP-binding enzyme PGE45_10555 PF13193 AMP-binding enzyme C-terminal domain PGE45_10570 PF00300 Histidine phosphatase superfamily (branch 1) PGE45_10575 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PGE45_10575 PF14602 Hexapeptide repeat of succinyl-transferase PGE45_10585 PF02910 Fumarate reductase flavoprotein C-term PGE45_10585 PF00890 FAD binding domain PGE45_10625 PF00285 Citrate synthase, C-terminal domain PGE45_10635 PF00155 Aminotransferase class I and II PGE45_10640 PF00037 4Fe-4S binding domain PGE45_10650 PF00679 Elongation factor G C-terminus PGE45_10650 PF03144 Elongation factor Tu domain 2 PGE45_10650 PF00009 Elongation factor Tu GTP binding domain PGE45_10650 PF14492 Elongation Factor G, domain II PGE45_10660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PGE45_10665 PF00005 ABC transporter PGE45_10665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PGE45_10670 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_10670 PF12911 N-terminal TM domain of oligopeptide transport permease C PGE45_10675 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_10680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PGE45_10680 PF00005 ABC transporter PGE45_10685 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_10685 PF12911 N-terminal TM domain of oligopeptide transport permease C PGE45_10690 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_10700 PF00296 Luciferase-like monooxygenase PGE45_10710 PF12146 Serine aminopeptidase, S33 PGE45_10725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PGE45_10735 PF02127 Aminopeptidase I zinc metalloprotease (M18) PGE45_10740 PF13419 Haloacid dehalogenase-like hydrolase PGE45_10780 PF01022 Bacterial regulatory protein, arsR family PGE45_10795 PF01719 Plasmid replication protein PGE45_10795 PF00910 RNA helicase PGE45_10830 PF07690 Major Facilitator Superfamily PGE45_10840 PF02502 Ribose/Galactose Isomerase PGE45_10845 PF01381 Helix-turn-helix PGE45_10850 PF01925 Sulfite exporter TauE/SafE PGE45_10855 PF04055 Radical SAM superfamily PGE45_10855 PF13186 Iron-sulfur cluster-binding domain PGE45_10860 PF00480 ROK family PGE45_10865 PF00884 Sulfatase PGE45_10870 PF00083 Sugar (and other) transporter PGE45_10875 PF00561 alpha/beta hydrolase fold PGE45_10875 PF00364 Biotin-requiring enzyme PGE45_10890 PF09924 Uncharacterised conserved protein (DUF2156) PGE45_10900 PF00391 PEP-utilising enzyme, mobile domain PGE45_10900 PF02896 PEP-utilising enzyme, TIM barrel domain PGE45_10900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PGE45_10925 PF13439 Glycosyltransferase Family 4 PGE45_10925 PF00534 Glycosyl transferases group 1 PGE45_10935 PF00004 ATPase family associated with various cellular activities (AAA) PGE45_10935 PF07724 AAA domain (Cdc48 subfamily) PGE45_10935 PF02861 Clp amino terminal domain, pathogenicity island component PGE45_10935 PF17871 AAA lid domain PGE45_10935 PF10431 C-terminal, D2-small domain, of ClpB protein PGE45_11005 PF00294 pfkB family carbohydrate kinase PGE45_11005 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PGE45_11015 PF00291 Pyridoxal-phosphate dependent enzyme PGE45_11030 PF02580 D-Tyr-tRNA(Tyr) deacylase PGE45_11045 PF08768 Domain of unknown function (DUF1794) PGE45_11055 PF00486 Transcriptional regulatory protein, C terminal PGE45_11060 PF00005 ABC transporter PGE45_11065 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_11070 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_11075 PF12849 PBP superfamily domain PGE45_11080 PF00300 Histidine phosphatase superfamily (branch 1) PGE45_11080 PF00293 NUDIX domain PGE45_11085 PF02503 Polyphosphate kinase middle domain PGE45_11085 PF13090 Polyphosphate kinase C-terminal domain 2 PGE45_11085 PF13089 Polyphosphate kinase N-terminal domain PGE45_11085 PF17941 Polyphosphate kinase C-terminal domain 1 PGE45_11110 PF00270 DEAD/DEAH box helicase PGE45_11110 PF00271 Helicase conserved C-terminal domain PGE45_11115 PF01255 Putative undecaprenyl diphosphate synthase PGE45_11120 PF03006 Haemolysin-III related PGE45_11125 PF01272 Transcription elongation factor, GreA/GreB, C-term PGE45_11125 PF03449 Transcription elongation factor, N-terminal PGE45_11130 PF01625 Peptide methionine sulfoxide reductase PGE45_11165 PF03358 NADPH-dependent FMN reductase PGE45_11170 PF00291 Pyridoxal-phosphate dependent enzyme PGE45_11170 PF00585 C-terminal regulatory domain of Threonine dehydratase PGE45_11180 PF00528 Binding-protein-dependent transport system inner membrane component PGE45_11180 PF12911 N-terminal TM domain of oligopeptide transport permease C PGE45_11190 PF00005 ABC transporter PGE45_11195 PF00005 ABC transporter PGE45_11200 PF00920 Dehydratase family PGE45_11205 PF11208 Protein of unknown function (DUF2992) PGE45_11210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PGE45_11220 PF00005 ABC transporter PGE45_11230 PF07730 Histidine kinase PGE45_11235 PF00196 Bacterial regulatory proteins, luxR family PGE45_11235 PF00072 Response regulator receiver domain PGE45_11240 PF01195 Peptidyl-tRNA hydrolase PGE45_11245 PF01386 Ribosomal L25p family PGE45_11245 PF14693 Ribosomal protein TL5, C-terminal domain PGE45_11260 PF01487 Type I 3-dehydroquinase PGE45_11265 PF02541 Ppx/GppA phosphatase family PGE45_11280 PF00113 Enolase, C-terminal TIM barrel domain PGE45_11280 PF03952 Enolase, N-terminal domain PGE45_11290 PF03461 TRCF domain PGE45_11290 PF00271 Helicase conserved C-terminal domain PGE45_11290 PF00270 DEAD/DEAH box helicase PGE45_11290 PF02559 CarD-like/TRCF domain PGE45_11290 PF17757 UvrB interaction domain PGE45_11305 PF00072 Response regulator receiver domain PGE45_11305 PF00486 Transcriptional regulatory protein, C terminal PGE45_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_11310 PF00672 HAMP domain PGE45_11310 PF00512 His Kinase A (phospho-acceptor) domain PGE45_11325 PF00118 TCP-1/cpn60 chaperonin family PGE45_11340 PF03167 Uracil DNA glycosylase superfamily PGE45_11350 PF02542 YgbB family PGE45_11355 PF09190 DALR domain PGE45_11355 PF01406 tRNA synthetases class I (C) catalytic domain PGE45_11360 PF00588 SpoU rRNA Methylase family PGE45_11360 PF08032 RNA 2'-O ribose methyltransferase substrate binding PGE45_11380 PF00005 ABC transporter PGE45_11380 PF17912 MalK OB fold domain PGE45_11385 PF00069 Protein kinase domain PGE45_11385 PF00400 WD domain, G-beta repeat PGE45_11410 PF05958 tRNA (Uracil-5-)-methyltransferase PGE45_11450 PF03613 PTS system mannose/fructose/sorbose family IID component PGE45_11455 PF03609 PTS system sorbose-specific iic component PGE45_11460 PF03610 PTS system fructose IIA component PGE45_11460 PF03830 PTS system sorbose subfamily IIB component PGE45_11465 PF03610 PTS system fructose IIA component PGE45_11470 PF00795 Carbon-nitrogen hydrolase PGE45_11470 PF02540 NAD synthase PGE45_11480 PF08244 Glycosyl hydrolases family 32 C terminal PGE45_11480 PF00251 Glycosyl hydrolases family 32 N-terminal domain PGE45_11485 PF00356 Bacterial regulatory proteins, lacI family PGE45_11490 PF13419 Haloacid dehalogenase-like hydrolase PGE45_11495 PF18665 Tetracyclin repressor-like, C-terminal domain PGE45_11495 PF00440 Bacterial regulatory proteins, tetR family PGE45_11515 PF00004 ATPase family associated with various cellular activities (AAA) PGE45_11515 PF07724 AAA domain (Cdc48 subfamily) PGE45_11515 PF17871 AAA lid domain PGE45_11515 PF02861 Clp amino terminal domain, pathogenicity island component PGE45_11515 PF10431 C-terminal, D2-small domain, of ClpB protein PGE45_11535 PF13443 Cro/C1-type HTH DNA-binding domain PGE45_11550 PF12704 MacB-like periplasmic core domain PGE45_11550 PF02687 FtsX-like permease family PGE45_11550 PF00005 ABC transporter PGE45_11555 PF02687 FtsX-like permease family PGE45_11555 PF00005 ABC transporter PGE45_11555 PF12704 MacB-like periplasmic core domain PGE45_11570 PF00486 Transcriptional regulatory protein, C terminal PGE45_11570 PF00072 Response regulator receiver domain PGE45_11575 PF00672 HAMP domain PGE45_11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_11575 PF00512 His Kinase A (phospho-acceptor) domain PGE45_11595 PF04235 Protein of unknown function (DUF418) PGE45_11600 PF13411 MerR HTH family regulatory protein PGE45_11605 PF00684 DnaJ central domain PGE45_11605 PF00226 DnaJ domain PGE45_11605 PF01556 DnaJ C terminal domain PGE45_11610 PF01025 GrpE PGE45_11615 PF00012 Hsp70 protein PGE45_11635 PF07690 Major Facilitator Superfamily PGE45_11640 PF00004 ATPase family associated with various cellular activities (AAA) PGE45_11640 PF17862 AAA+ lid domain PGE45_11640 PF06480 FtsH Extracellular PGE45_11640 PF01434 Peptidase family M41 PGE45_11650 PF00005 ABC transporter PGE45_11655 PF01032 FecCD transport family PGE45_11680 PF00196 Bacterial regulatory proteins, luxR family PGE45_11680 PF00072 Response regulator receiver domain PGE45_11685 PF00672 HAMP domain PGE45_11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_11685 PF07730 Histidine kinase PGE45_11690 PF00005 ABC transporter PGE45_11735 PF00881 Nitroreductase family PGE45_11740 PF01850 PIN domain PGE45_11755 PF00199 Catalase PGE45_11755 PF06628 Catalase-related immune-responsive PGE45_11805 PF00664 ABC transporter transmembrane region PGE45_11805 PF00005 ABC transporter PGE45_11810 PF00664 ABC transporter transmembrane region PGE45_11810 PF00005 ABC transporter PGE45_11830 PF00271 Helicase conserved C-terminal domain PGE45_11830 PF00176 SNF2 family N-terminal domain PGE45_11830 PF12419 SNF2 Helicase protein PGE45_11850 PF01850 PIN domain PGE45_11900 PF00005 ABC transporter PGE45_11900 PF08402 TOBE domain PGE45_11920 PF17754 MftR C-terminal domain PGE45_11920 PF00440 Bacterial regulatory proteins, tetR family PGE45_11935 PF13183 4Fe-4S dicluster domain PGE45_11935 PF02665 Nitrate reductase gamma subunit PGE45_11935 PF02754 Cysteine-rich domain PGE45_11940 PF17967 Pullulanase N2 domain PGE45_11940 PF18494 Pullulanase Ins domain PGE45_11940 PF03714 Bacterial pullanase-associated domain PGE45_11940 PF11852 Domain of unknown function (DUF3372) PGE45_11940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PGE45_11945 PF02687 FtsX-like permease family PGE45_11945 PF00005 ABC transporter PGE45_11945 PF12704 MacB-like periplasmic core domain PGE45_11975 PF00005 ABC transporter PGE45_11975 PF08402 TOBE domain PGE45_11985 PF00196 Bacterial regulatory proteins, luxR family PGE45_11985 PF00072 Response regulator receiver domain PGE45_12040 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PGE45_12050 PF00196 Bacterial regulatory proteins, luxR family PGE45_12050 PF00072 Response regulator receiver domain PGE45_12055 PF00756 Putative esterase PGE45_12055 PF01476 LysM domain PGE45_12080 PF00069 Protein kinase domain PGE45_12100 PF00005 ABC transporter PGE45_12120 PF08241 Methyltransferase domain PGE45_12125 PF00202 Aminotransferase class-III PGE45_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PGE45_12140 PF07730 Histidine kinase PGE45_12140 PF05231 MASE1 PGE45_12145 PF00196 Bacterial regulatory proteins, luxR family PGE45_12145 PF00072 Response regulator receiver domain PGE45_12155 PF13472 GDSL-like Lipase/Acylhydrolase family PGE45_12160 PF00561 alpha/beta hydrolase fold PGE45_12165 PF07690 Major Facilitator Superfamily PGE45_12170 PF00459 Inositol monophosphatase family PGE45_12175 PF00324 Amino acid permease PGE45_12185 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PGE45_12190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PGE45_12195 PF13462 Thioredoxin PGE45_12195 PF06965 Na+/H+ antiporter 1 PGE45_12200 PF00480 ROK family PGE45_12205 PF01594 AI-2E family transporter PGE45_12215 PF02664 S-Ribosylhomocysteinase (LuxS) PGE45_12225 PF03176 MMPL family PGE45_12240 PF01048 Phosphorylase superfamily PGE45_12250 PF13411 MerR HTH family regulatory protein PGE45_12255 PF02627 Carboxymuconolactone decarboxylase family PGE45_12265 PF06826 Predicted Permease Membrane Region PGE45_12265 PF02080 TrkA-C domain PGE45_12270 PF13722 5TM C-terminal transporter carbon starvation CstA PGE45_12270 PF02554 Carbon starvation protein CstA PGE45_12290 PF12401 Protein of unknown function (DUF2662) PGE45_12290 PF00498 FHA domain PGE45_12295 PF16697 Inner membrane component of T3SS, cytoplasmic domain PGE45_12305 PF01098 Cell cycle protein PGE45_12310 PF00905 Penicillin binding protein transpeptidase domain PGE45_12315 PF00069 Protein kinase domain PGE45_12320 PF00069 Protein kinase domain PGE45_12320 PF03793 PASTA domain PGE45_12325 PF00072 Response regulator receiver domain PGE45_12325 PF00196 Bacterial regulatory proteins, luxR family PGE45_12330 PF07730 Histidine kinase PGE45_12340 PF02661 Fic/DOC family PGE45_12340 PF13784 Fic/DOC family N-terminal PGE45_12345 PF01842 ACT domain PGE45_12345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PGE45_12345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PGE45_12350 PF00266 Aminotransferase class-V PGE45_12395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PGE45_12395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PGE45_12400 PF13735 tRNA nucleotidyltransferase domain 2 putative PGE45_12400 PF12627 Probable RNA and SrmB- binding site of polymerase A PGE45_12400 PF01743 Poly A polymerase head domain PGE45_12405 PF00293 NUDIX domain PGE45_12415 PF03023 Lipid II flippase MurJ PGE45_12420 PF07992 Pyridine nucleotide-disulphide oxidoreductase PGE45_12425 PF00085 Thioredoxin PGE45_12430 PF14821 Threonine synthase N terminus PGE45_12430 PF00291 Pyridoxal-phosphate dependent enzyme PGE45_12435 PF00155 Aminotransferase class I and II PGE45_12440 PF01820 D-ala D-ala ligase N-terminus PGE45_12440 PF07478 D-ala D-ala ligase C-terminus PGE45_12445 PF01433 Peptidase family M1 domain PGE45_12445 PF11838 ERAP1-like C-terminal domain PGE45_12455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PGE45_12455 PF14572 Phosphoribosyl synthetase-associated domain PGE45_12460 PF12804 MobA-like NTP transferase domain PGE45_12475 PF00440 Bacterial regulatory proteins, tetR family PGE45_12510 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain PGE45_12510 PF01113 Dihydrodipicolinate reductase, N-terminus PGE45_12515 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PGE45_12520 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH PGE45_12565 PF02397 Bacterial sugar transferase PGE45_12570 PF00294 pfkB family carbohydrate kinase PGE45_12570 PF01467 Cytidylyltransferase-like PGE45_12580 PF07726 ATPase family associated with various cellular activities (AAA) PGE45_12580 PF17863 AAA lid domain PGE45_12605 PF13191 AAA ATPase domain PGE45_12605 PF00069 Protein kinase domain PGE45_12625 PF00005 ABC transporter PGE45_12625 PF16326 ABC transporter C-terminal domain PGE45_12625 PF12848 ABC transporter PGE45_12630 PF00288 GHMP kinases N terminal domain PGE45_12630 PF08544 GHMP kinases C terminal PGE45_12635 PF00398 Ribosomal RNA adenine dimethylase PGE45_12640 PF01476 LysM domain PGE45_12640 PF06737 Transglycosylase-like domain PGE45_12650 PF01026 TatD related DNase PGE45_12655 PF09334 tRNA synthetases class I (M) PGE45_12665 PF00857 Isochorismatase family PGE45_12670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PGE45_12675 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase PGE45_12675 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PGE45_12700 PF00480 ROK family PGE45_12705 PF03169 OPT oligopeptide transporter protein PGE45_12710 PF00535 Glycosyl transferase family 2 PGE45_12760 PF03454 MoeA C-terminal region (domain IV) PGE45_12760 PF00994 Probable molybdopterin binding domain PGE45_12760 PF03453 MoeA N-terminal region (domain I and II) PGE45_12765 PF01812 5-formyltetrahydrofolate cyclo-ligase family PGE45_12775 PF01741 Large-conductance mechanosensitive channel, MscL PGE45_12795 PF00582 Universal stress protein family PGE45_12800 PF01476 LysM domain PGE45_12800 PF00877 NlpC/P60 family PGE45_12800 PF08239 Bacterial SH3 domain PGE45_12805 PF02742 Iron dependent repressor, metal binding and dimerisation domain PGE45_12805 PF01325 Iron dependent repressor, N-terminal DNA binding domain PGE45_12805 PF18357 Diphteria toxin repressor SH3 domain PGE45_12835 PF00860 Permease family PGE45_12840 PF00270 DEAD/DEAH box helicase PGE45_12840 PF08494 DEAD/H associated PGE45_12840 PF00271 Helicase conserved C-terminal domain PGE45_12845 PF03167 Uracil DNA glycosylase superfamily PGE45_12850 PF11228 Protein of unknown function (DUF3027) PGE45_12865 PF04851 Type III restriction enzyme, res subunit PGE45_12865 PF00271 Helicase conserved C-terminal domain PGE45_12880 PF04012 PspA/IM30 family