locus-tag class description JJJ15_00005 PF08275 DNA primase catalytic core, N-terminal domain JJJ15_00005 PF01807 CHC2 zinc finger JJJ15_00005 PF08278 DNA primase DnaG DnaB-binding JJJ15_00005 PF10410 DnaB-helicase binding domain of primase JJJ15_00005 PF13662 Toprim domain JJJ15_00010 PF01784 NIF3 (NGG1p interacting factor 3) JJJ15_00015 PF02591 C4-type zinc ribbon domain JJJ15_00030 PF00557 Metallopeptidase family M24 JJJ15_00040 PF02548 Ketopantoate hydroxymethyltransferase JJJ15_00045 PF00753 Metallo-beta-lactamase superfamily JJJ15_00050 PF03741 Integral membrane protein TerC family JJJ15_00070 PF01628 HrcA protein C terminal domain JJJ15_00070 PF08220 DeoR-like helix-turn-helix domain JJJ15_00075 PF00684 DnaJ central domain JJJ15_00075 PF00226 DnaJ domain JJJ15_00075 PF01556 DnaJ C terminal domain JJJ15_00080 PF01168 Alanine racemase, N-terminal domain JJJ15_00095 PF00005 ABC transporter JJJ15_00105 PF00109 Beta-ketoacyl synthase, N-terminal domain JJJ15_00105 PF16197 Ketoacyl-synthetase C-terminal extension JJJ15_00105 PF09277 Erythronolide synthase, docking JJJ15_00105 PF08990 Erythronolide synthase docking JJJ15_00105 PF08240 Alcohol dehydrogenase GroES-like domain JJJ15_00105 PF00698 Acyl transferase domain JJJ15_00105 PF00550 Phosphopantetheine attachment site JJJ15_00105 PF14765 Polyketide synthase dehydratase JJJ15_00105 PF08659 KR domain JJJ15_00105 PF02801 Beta-ketoacyl synthase, C-terminal domain JJJ15_00115 PF00005 ABC transporter JJJ15_00115 PF00664 ABC transporter transmembrane region JJJ15_00120 PF00664 ABC transporter transmembrane region JJJ15_00120 PF00005 ABC transporter JJJ15_00125 PF02562 PhoH-like protein JJJ15_00130 PF02130 Uncharacterized protein family UPF0054 JJJ15_00135 PF01595 Cyclin M transmembrane N-terminal domain JJJ15_00135 PF03471 Transporter associated domain JJJ15_00135 PF00571 CBS domain JJJ15_00140 PF01926 50S ribosome-binding GTPase JJJ15_00140 PF07650 KH domain JJJ15_00145 PF01619 Proline dehydrogenase JJJ15_00145 PF00171 Aldehyde dehydrogenase family JJJ15_00145 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JJJ15_00145 PF14850 DNA-binding domain of Proline dehydrogenase JJJ15_00150 PF00083 Sugar (and other) transporter JJJ15_00155 PF01381 Helix-turn-helix JJJ15_00165 PF00005 ABC transporter JJJ15_00170 PF00682 HMGL-like JJJ15_00170 PF08502 LeuA allosteric (dimerisation) domain JJJ15_00175 PF02565 Recombination protein O C terminal JJJ15_00175 PF11967 Recombination protein O N terminal JJJ15_00180 PF01255 Putative undecaprenyl diphosphate synthase JJJ15_00185 PF01475 Ferric uptake regulator family JJJ15_00190 PF00950 ABC 3 transport family JJJ15_00195 PF00005 ABC transporter JJJ15_00200 PF01297 Zinc-uptake complex component A periplasmic JJJ15_00200 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JJJ15_00205 PF03129 Anticodon binding domain JJJ15_00205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJJ15_00215 PF01207 Dihydrouridine synthase (Dus) JJJ15_00225 PF00300 Histidine phosphatase superfamily (branch 1) JJJ15_00235 PF00483 Nucleotidyl transferase JJJ15_00240 PF00534 Glycosyl transferases group 1 JJJ15_00240 PF13439 Glycosyltransferase Family 4 JJJ15_00250 PF00005 ABC transporter JJJ15_00260 PF01145 SPFH domain / Band 7 family JJJ15_00265 PF00588 SpoU rRNA Methylase family JJJ15_00275 PF02378 Phosphotransferase system, EIIC JJJ15_00275 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JJJ15_00275 PF00367 phosphotransferase system, EIIB JJJ15_00285 PF12848 ABC transporter JJJ15_00285 PF00005 ABC transporter JJJ15_00290 PF01521 Iron-sulphur cluster biosynthesis JJJ15_00300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JJJ15_00300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JJJ15_00315 PF00365 Phosphofructokinase JJJ15_00320 PF01474 Class-II DAHP synthetase family JJJ15_00325 PF00069 Protein kinase domain JJJ15_00325 PF03793 PASTA domain JJJ15_00330 PF00348 Polyprenyl synthetase JJJ15_00335 PF04545 Sigma-70, region 4 JJJ15_00335 PF00140 Sigma-70 factor, region 1.2 JJJ15_00335 PF04542 Sigma-70 region 2 JJJ15_00335 PF04539 Sigma-70 region 3 JJJ15_00340 PF01926 50S ribosome-binding GTPase JJJ15_00340 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JJJ15_00355 PF00342 Phosphoglucose isomerase JJJ15_00370 PF01381 Helix-turn-helix JJJ15_00385 PF07859 alpha/beta hydrolase fold JJJ15_00400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JJJ15_00410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JJJ15_00410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JJJ15_00415 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JJJ15_00415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJJ15_00420 PF11838 ERAP1-like C-terminal domain JJJ15_00420 PF01433 Peptidase family M1 domain JJJ15_00425 PF00498 FHA domain JJJ15_00430 PF00376 MerR family regulatory protein JJJ15_00435 PF13411 MerR HTH family regulatory protein JJJ15_00440 PF00012 Hsp70 protein JJJ15_00445 PF01384 Phosphate transporter family JJJ15_00455 PF00251 Glycosyl hydrolases family 32 N-terminal domain JJJ15_00455 PF08244 Glycosyl hydrolases family 32 C terminal JJJ15_00460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JJJ15_00460 PF00367 phosphotransferase system, EIIB JJJ15_00460 PF02378 Phosphotransferase system, EIIC JJJ15_00465 PF00356 Bacterial regulatory proteins, lacI family JJJ15_00475 PF13419 Haloacid dehalogenase-like hydrolase JJJ15_00495 PF00365 Phosphofructokinase JJJ15_00500 PF13397 RNA polymerase-binding protein JJJ15_00505 PF00535 Glycosyl transferase family 2 JJJ15_00505 PF00795 Carbon-nitrogen hydrolase JJJ15_00510 PF00270 DEAD/DEAH box helicase JJJ15_00510 PF08148 DSHCT (NUC185) domain JJJ15_00510 PF00271 Helicase conserved C-terminal domain JJJ15_00515 PF00781 Diacylglycerol kinase catalytic domain JJJ15_00520 PF00902 Sec-independent protein translocase protein (TatC) JJJ15_00525 PF02416 mttA/Hcf106 family JJJ15_00530 PF13280 WYL domain JJJ15_00545 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JJJ15_00550 PF01634 ATP phosphoribosyltransferase JJJ15_00550 PF08029 HisG, C-terminal domain JJJ15_00560 PF09084 NMT1/THI5 like JJJ15_00565 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_00570 PF01161 Phosphatidylethanolamine-binding protein JJJ15_00575 PF00106 short chain dehydrogenase JJJ15_00580 PF00588 SpoU rRNA Methylase family JJJ15_00590 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJJ15_00590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJJ15_00595 PF00330 Aconitase family (aconitate hydratase) JJJ15_00595 PF00694 Aconitase C-terminal domain JJJ15_00600 PF01938 TRAM domain JJJ15_00600 PF05958 tRNA (Uracil-5-)-methyltransferase JJJ15_00605 PF13520 Amino acid permease JJJ15_00610 PF02254 TrkA-N domain JJJ15_00610 PF02080 TrkA-C domain JJJ15_00615 PF02080 TrkA-C domain JJJ15_00615 PF02254 TrkA-N domain JJJ15_00640 PF11268 Protein of unknown function (DUF3071) JJJ15_00655 PF00521 DNA gyrase/topoisomerase IV, subunit A JJJ15_00655 PF03989 DNA gyrase C-terminal domain, beta-propeller JJJ15_00665 PF00204 DNA gyrase B JJJ15_00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_00665 PF01751 Toprim domain JJJ15_00665 PF00986 DNA gyrase B subunit, carboxyl terminus JJJ15_00685 PF02153 Prephenate dehydrogenase JJJ15_00690 PF01479 S4 domain JJJ15_00690 PF00849 RNA pseudouridylate synthase JJJ15_00695 PF04079 Segregation and condensation complex subunit ScpB JJJ15_00700 PF02616 Segregation and condensation protein ScpA JJJ15_00705 PF13614 AAA domain JJJ15_00710 PF00589 Phage integrase family JJJ15_00710 PF02899 Phage integrase, N-terminal SAM-like domain JJJ15_00715 PF03840 Preprotein translocase SecG subunit JJJ15_00720 PF00121 Triosephosphate isomerase JJJ15_00725 PF00162 Phosphoglycerate kinase JJJ15_00730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JJJ15_00730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JJJ15_00735 PF10298 WhiA N-terminal LAGLIDADG-like domain JJJ15_00735 PF14527 WhiA LAGLIDADG-like domain JJJ15_00735 PF02650 WhiA C-terminal HTH domain JJJ15_00740 PF01933 Uncharacterised protein family UPF0052 JJJ15_00745 PF03668 P-loop ATPase protein family JJJ15_00750 PF02222 ATP-grasp domain JJJ15_00750 PF01370 NAD dependent epimerase/dehydratase family JJJ15_00755 PF00232 Glycosyl hydrolase family 1 JJJ15_00770 PF01541 GIY-YIG catalytic domain JJJ15_00770 PF02151 UvrB/uvrC motif JJJ15_00770 PF08459 UvrC Helix-hairpin-helix N-terminal JJJ15_00800 PF00459 Inositol monophosphatase family JJJ15_00815 PF00005 ABC transporter JJJ15_00815 PF17755 UvrA DNA-binding domain JJJ15_00815 PF17760 UvrA interaction domain JJJ15_00840 PF02595 Glycerate kinase family JJJ15_00845 PF00474 Sodium:solute symporter family JJJ15_00850 PF01648 4'-phosphopantetheinyl transferase superfamily JJJ15_00855 PF02801 Beta-ketoacyl synthase, C-terminal domain JJJ15_00855 PF00109 Beta-ketoacyl synthase, N-terminal domain JJJ15_00860 PF01039 Carboxyl transferase domain JJJ15_00865 PF00364 Biotin-requiring enzyme JJJ15_00865 PF02785 Biotin carboxylase C-terminal domain JJJ15_00865 PF00289 Biotin carboxylase, N-terminal domain JJJ15_00865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJJ15_00885 PF00834 Ribulose-phosphate 3 epimerase family JJJ15_00890 PF01029 NusB family JJJ15_00890 PF01189 16S rRNA methyltransferase RsmB/F JJJ15_00895 PF00551 Formyl transferase JJJ15_00895 PF02911 Formyl transferase, C-terminal domain JJJ15_00905 PF08305 NPCBM/NEW2 domain JJJ15_00905 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase JJJ15_00905 PF12905 Endo-alpha-N-acetylgalactosaminidase JJJ15_00905 PF18080 Galactose mutarotase-like fold domain JJJ15_00905 PF17974 Galactose-binding domain-like JJJ15_00905 PF17451 Glycosyl hydrolase 101 beta sandwich domain JJJ15_00910 PF17764 3′ DNA-binding domain (3′BD) JJJ15_00915 PF02773 S-adenosylmethionine synthetase, C-terminal domain JJJ15_00915 PF02772 S-adenosylmethionine synthetase, central domain JJJ15_00915 PF00438 S-adenosylmethionine synthetase, N-terminal domain JJJ15_00920 PF04127 DNA / pantothenate metabolism flavoprotein JJJ15_00920 PF02441 Flavoprotein JJJ15_00925 PF01192 RNA polymerase Rpb6 JJJ15_00930 PF00625 Guanylate kinase JJJ15_00935 PF00625 Guanylate kinase JJJ15_00940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JJJ15_00945 PF02142 MGS-like domain JJJ15_00945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JJJ15_00945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJJ15_00950 PF00117 Glutamine amidotransferase class-I JJJ15_00950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JJJ15_00955 PF01979 Amidohydrolase family JJJ15_00960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJJ15_00960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJJ15_00965 PF00156 Phosphoribosyl transferase domain JJJ15_00975 PF05368 NmrA-like family JJJ15_00980 PF01029 NusB family JJJ15_00985 PF09285 Elongation factor P, C-terminal JJJ15_00985 PF08207 Elongation factor P (EF-P) KOW-like domain JJJ15_00985 PF01132 Elongation factor P (EF-P) OB domain JJJ15_01000 PF01761 3-dehydroquinate synthase JJJ15_01005 PF01264 Chorismate synthase JJJ15_01010 PF08501 Shikimate dehydrogenase substrate binding domain JJJ15_01010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JJJ15_01010 PF01488 Shikimate / quinate 5-dehydrogenase JJJ15_01020 PF03652 Holliday junction resolvase JJJ15_01025 PF02272 DHHA1 domain JJJ15_01025 PF01411 tRNA synthetases class II (A) JJJ15_01025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JJJ15_01030 PF01479 S4 domain JJJ15_01030 PF00163 Ribosomal protein S4/S9 N-terminal domain JJJ15_01035 PF12002 MgsA AAA+ ATPase C terminal JJJ15_01035 PF16193 AAA C-terminal domain JJJ15_01035 PF00004 ATPase family associated with various cellular activities (AAA) JJJ15_01040 PF03176 MMPL family JJJ15_01045 PF01300 Telomere recombination JJJ15_01060 PF01022 Bacterial regulatory protein, arsR family JJJ15_01070 PF01336 OB-fold nucleic acid binding domain JJJ15_01070 PF00152 tRNA synthetases class II (D, K and N) JJJ15_01070 PF02938 GAD domain JJJ15_01085 PF00270 DEAD/DEAH box helicase JJJ15_01085 PF00271 Helicase conserved C-terminal domain JJJ15_01085 PF03880 DbpA RNA binding domain JJJ15_01100 PF02254 TrkA-N domain JJJ15_01100 PF00999 Sodium/hydrogen exchanger family JJJ15_01105 PF03129 Anticodon binding domain JJJ15_01105 PF13393 Histidyl-tRNA synthetase JJJ15_01110 PF12344 Ultra-violet resistance protein B JJJ15_01110 PF00271 Helicase conserved C-terminal domain JJJ15_01110 PF04851 Type III restriction enzyme, res subunit JJJ15_01110 PF02151 UvrB/uvrC motif JJJ15_01110 PF17757 UvrB interaction domain JJJ15_01130 PF01121 Dephospho-CoA kinase JJJ15_01145 PF00575 S1 RNA binding domain JJJ15_01150 PF01367 5'-3' exonuclease, C-terminal SAM fold JJJ15_01150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JJJ15_01150 PF00476 DNA polymerase family A JJJ15_01155 PF03061 Thioesterase superfamily JJJ15_01160 PF00072 Response regulator receiver domain JJJ15_01160 PF03861 ANTAR domain JJJ15_01170 PF00224 Pyruvate kinase, barrel domain JJJ15_01170 PF02887 Pyruvate kinase, alpha/beta domain JJJ15_01175 PF01790 Prolipoprotein diacylglyceryl transferase JJJ15_01180 PF00218 Indole-3-glycerol phosphate synthase JJJ15_01190 PF01502 Phosphoribosyl-AMP cyclohydrolase JJJ15_01195 PF00977 Histidine biosynthesis protein JJJ15_01205 PF03136 Pup-ligase protein JJJ15_01210 PF05639 Pup-like protein JJJ15_01215 PF03136 Pup-ligase protein JJJ15_01220 PF17758 Proteasomal ATPase OB N-terminal domain JJJ15_01220 PF16450 Proteasomal ATPase OB C-terminal domain JJJ15_01220 PF00004 ATPase family associated with various cellular activities (AAA) JJJ15_01225 PF08704 tRNA methyltransferase complex GCD14 subunit JJJ15_01240 PF00571 CBS domain JJJ15_01240 PF02163 Peptidase family M50 JJJ15_01245 PF12705 PD-(D/E)XK nuclease superfamily JJJ15_01250 PF00248 Aldo/keto reductase family JJJ15_01260 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJJ15_01270 PF01432 Peptidase family M3 JJJ15_01275 PF07690 Major Facilitator Superfamily JJJ15_01285 PF01594 AI-2E family transporter JJJ15_01295 PF01263 Aldose 1-epimerase JJJ15_01300 PF13419 Haloacid dehalogenase-like hydrolase JJJ15_01305 PF01594 AI-2E family transporter JJJ15_01310 PF01569 PAP2 superfamily JJJ15_01325 PF00128 Alpha amylase, catalytic domain JJJ15_01325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJJ15_01330 PF00128 Alpha amylase, catalytic domain JJJ15_01350 PF04055 Radical SAM superfamily JJJ15_01355 PF01228 Glycine radical JJJ15_01355 PF02901 Pyruvate formate lyase-like JJJ15_01360 PF02901 Pyruvate formate lyase-like JJJ15_01360 PF01228 Glycine radical JJJ15_01365 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JJJ15_01365 PF02780 Transketolase, C-terminal domain JJJ15_01365 PF02779 Transketolase, pyrimidine binding domain JJJ15_01375 PF00654 Voltage gated chloride channel JJJ15_01385 PF02789 Cytosol aminopeptidase family, N-terminal domain JJJ15_01385 PF00883 Cytosol aminopeptidase family, catalytic domain JJJ15_01390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJJ15_01390 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJJ15_01395 PF02817 e3 binding domain JJJ15_01395 PF00364 Biotin-requiring enzyme JJJ15_01395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJJ15_01405 PF03099 Biotin/lipoate A/B protein ligase family JJJ15_01410 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JJJ15_01410 PF04055 Radical SAM superfamily JJJ15_01440 PF03951 Glutamine synthetase, beta-Grasp domain JJJ15_01440 PF00120 Glutamine synthetase, catalytic domain JJJ15_01450 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_01455 PF00005 ABC transporter JJJ15_01465 PF08335 GlnD PII-uridylyltransferase JJJ15_01465 PF03710 Glutamate-ammonia ligase adenylyltransferase JJJ15_01470 PF03951 Glutamine synthetase, beta-Grasp domain JJJ15_01470 PF00120 Glutamine synthetase, catalytic domain JJJ15_01485 PF00005 ABC transporter JJJ15_01495 PF00005 ABC transporter JJJ15_01500 PF03993 Domain of Unknown Function (DUF349) JJJ15_01510 PF02824 TGS domain JJJ15_01510 PF13291 ACT domain JJJ15_01510 PF04607 Region found in RelA / SpoT proteins JJJ15_01515 PF00156 Phosphoribosyl transferase domain JJJ15_01520 PF02355 Protein export membrane protein JJJ15_01520 PF07549 SecD/SecF GG Motif JJJ15_01525 PF02355 Protein export membrane protein JJJ15_01525 PF07549 SecD/SecF GG Motif JJJ15_01535 PF05496 Holliday junction DNA helicase RuvB P-loop domain JJJ15_01535 PF17864 RuvB AAA lid domain JJJ15_01535 PF05491 RuvB C-terminal winged helix domain JJJ15_01540 PF07499 RuvA, C-terminal domain JJJ15_01540 PF01330 RuvA N terminal domain JJJ15_01545 PF02075 Crossover junction endodeoxyribonuclease RuvC JJJ15_01550 PF01709 Transcriptional regulator JJJ15_01555 PF01174 SNO glutamine amidotransferase family JJJ15_01560 PF00293 NUDIX domain JJJ15_01565 PF01680 SOR/SNZ family JJJ15_01585 PF13439 Glycosyltransferase Family 4 JJJ15_01590 PF03279 Bacterial lipid A biosynthesis acyltransferase JJJ15_01595 PF01066 CDP-alcohol phosphatidyltransferase JJJ15_01600 PF01230 HIT domain JJJ15_01605 PF03129 Anticodon binding domain JJJ15_01605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JJJ15_01605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJJ15_01610 PF00762 Ferrochelatase JJJ15_01625 PF04055 Radical SAM superfamily JJJ15_01635 PF02390 Putative methyltransferase JJJ15_01640 PF00009 Elongation factor Tu GTP binding domain JJJ15_01640 PF00679 Elongation factor G C-terminus JJJ15_01640 PF06421 GTP-binding protein LepA C-terminus JJJ15_01650 PF00291 Pyridoxal-phosphate dependent enzyme JJJ15_01670 PF00117 Glutamine amidotransferase class-I JJJ15_01675 PF02885 Glycosyl transferase family, helical bundle domain JJJ15_01675 PF00591 Glycosyl transferase family, a/b domain JJJ15_01680 PF00291 Pyridoxal-phosphate dependent enzyme JJJ15_01685 PF00290 Tryptophan synthase alpha chain JJJ15_01705 PF00005 ABC transporter JJJ15_01710 PF01649 Ribosomal protein S20 JJJ15_01715 PF08903 Domain of unknown function (DUF1846) JJJ15_01730 PF00575 S1 RNA binding domain JJJ15_01730 PF17674 HHH domain JJJ15_01730 PF16921 Tex protein YqgF-like domain JJJ15_01730 PF09371 Tex-like protein N-terminal domain JJJ15_01735 PF02645 Uncharacterised protein, DegV family COG1307 JJJ15_01740 PF08264 Anticodon-binding domain of tRNA JJJ15_01740 PF13603 Leucyl-tRNA synthetase, Domain 2 JJJ15_01740 PF09334 tRNA synthetases class I (M) JJJ15_01745 PF01230 HIT domain JJJ15_01775 PF00209 Sodium:neurotransmitter symporter family JJJ15_01780 PF01048 Phosphorylase superfamily JJJ15_01790 PF01327 Polypeptide deformylase JJJ15_01830 PF00456 Transketolase, thiamine diphosphate binding domain JJJ15_01830 PF17831 Pyruvate dehydrogenase E1 component middle domain JJJ15_01835 PF10415 Fumarase C C-terminus JJJ15_01835 PF00206 Lyase JJJ15_01840 PF17853 GGDEF-like domain JJJ15_01840 PF13556 PucR C-terminal helix-turn-helix domain JJJ15_01845 PF00550 Phosphopantetheine attachment site JJJ15_01850 PF00109 Beta-ketoacyl synthase, N-terminal domain JJJ15_01850 PF02801 Beta-ketoacyl synthase, C-terminal domain JJJ15_01860 PF05762 VWA domain containing CoxE-like protein JJJ15_01865 PF07728 AAA domain (dynein-related subfamily) JJJ15_02050 PF14659 Phage integrase, N-terminal SAM-like domain JJJ15_02050 PF00589 Phage integrase family JJJ15_02085 PF01467 Cytidylyltransferase-like JJJ15_02090 PF00455 DeoR C terminal sensor domain JJJ15_02090 PF08220 DeoR-like helix-turn-helix domain JJJ15_02095 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain JJJ15_02095 PF17386 Lacto-N-biose phosphorylase C-terminal domain JJJ15_02095 PF17385 Lacto-N-biose phosphorylase central domain JJJ15_02105 PF00171 Aldehyde dehydrogenase family JJJ15_02110 PF01472 PUA domain JJJ15_02110 PF00696 Amino acid kinase family JJJ15_02115 PF01926 50S ribosome-binding GTPase JJJ15_02115 PF01018 GTP1/OBG JJJ15_02115 PF09269 Domain of unknown function (DUF1967) JJJ15_02120 PF01016 Ribosomal L27 protein JJJ15_02125 PF00829 Ribosomal prokaryotic L21 protein JJJ15_02130 PF10150 Ribonuclease E/G family JJJ15_02135 PF01654 Cytochrome bd terminal oxidase subunit I JJJ15_02140 PF02322 Cytochrome bd terminal oxidase subunit II JJJ15_02145 PF04055 Radical SAM superfamily JJJ15_02145 PF13186 Iron-sulfur cluster-binding domain JJJ15_02150 PF01925 Sulfite exporter TauE/SafE JJJ15_02160 PF00356 Bacterial regulatory proteins, lacI family JJJ15_02165 PF00005 ABC transporter JJJ15_02165 PF00664 ABC transporter transmembrane region JJJ15_02170 PF00664 ABC transporter transmembrane region JJJ15_02170 PF00005 ABC transporter JJJ15_02180 PF00072 Response regulator receiver domain JJJ15_02180 PF00196 Bacterial regulatory proteins, luxR family JJJ15_02185 PF06827 Zinc finger found in FPG and IleRS JJJ15_02185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JJJ15_02185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JJJ15_02190 PF00035 Double-stranded RNA binding motif JJJ15_02190 PF14622 Ribonuclease-III-like JJJ15_02195 PF02620 Large ribosomal RNA subunit accumulation protein YceD JJJ15_02205 PF01467 Cytidylyltransferase-like JJJ15_02210 PF05175 Methyltransferase small domain JJJ15_02215 PF00884 Sulfatase JJJ15_02225 PF00356 Bacterial regulatory proteins, lacI family JJJ15_02230 PF00083 Sugar (and other) transporter JJJ15_02235 PF00270 DEAD/DEAH box helicase JJJ15_02235 PF17191 RecG wedge domain JJJ15_02235 PF00271 Helicase conserved C-terminal domain JJJ15_02240 PF02734 DAK2 domain JJJ15_02240 PF13684 Dihydroxyacetone kinase family JJJ15_02245 PF00830 Ribosomal L28 family JJJ15_02260 PF00005 ABC transporter JJJ15_02260 PF00664 ABC transporter transmembrane region JJJ15_02265 PF00664 ABC transporter transmembrane region JJJ15_02265 PF00005 ABC transporter JJJ15_02270 PF00586 AIR synthase related protein, N-terminal domain JJJ15_02270 PF02769 AIR synthase related protein, C-terminal domain JJJ15_02275 PF01820 D-ala D-ala ligase N-terminus JJJ15_02275 PF07478 D-ala D-ala ligase C-terminus JJJ15_02285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JJJ15_02285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JJJ15_02295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JJJ15_02315 PF00005 ABC transporter JJJ15_02315 PF00664 ABC transporter transmembrane region JJJ15_02330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JJJ15_02330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JJJ15_02330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JJJ15_02335 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_02335 PF00672 HAMP domain JJJ15_02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_02340 PF00486 Transcriptional regulatory protein, C terminal JJJ15_02340 PF00072 Response regulator receiver domain JJJ15_02350 PF00694 Aconitase C-terminal domain JJJ15_02355 PF00330 Aconitase family (aconitate hydratase) JJJ15_02380 PF00534 Glycosyl transferases group 1 JJJ15_02380 PF13439 Glycosyltransferase Family 4 JJJ15_02390 PF03477 ATP cone domain JJJ15_02400 PF00717 Peptidase S24-like JJJ15_02400 PF01726 LexA DNA binding domain JJJ15_02405 PF00056 lactate/malate dehydrogenase, NAD binding domain JJJ15_02405 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JJJ15_02410 PF00933 Glycosyl hydrolase family 3 N terminal domain JJJ15_02410 PF01915 Glycosyl hydrolase family 3 C-terminal domain JJJ15_02415 PF13307 Helicase C-terminal domain JJJ15_02420 PF16360 GTP-binding GTPase Middle Region JJJ15_02420 PF01926 50S ribosome-binding GTPase JJJ15_02420 PF13167 GTP-binding GTPase N-terminal JJJ15_02430 PF05173 Dihydrodipicolinate reductase, C-terminus JJJ15_02430 PF01113 Dihydrodipicolinate reductase, N-terminus JJJ15_02435 PF05193 Peptidase M16 inactive domain JJJ15_02435 PF00675 Insulinase (Peptidase family M16) JJJ15_02445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JJJ15_02445 PF00575 S1 RNA binding domain JJJ15_02445 PF00013 KH domain JJJ15_02445 PF01138 3' exoribonuclease family, domain 1 JJJ15_02450 PF00312 Ribosomal protein S15 JJJ15_02455 PF01687 Riboflavin kinase JJJ15_02455 PF06574 FAD synthetase JJJ15_02460 PF08361 MAATS-type transcriptional repressor, C-terminal region JJJ15_02460 PF00440 Bacterial regulatory proteins, tetR family JJJ15_02465 PF07690 Major Facilitator Superfamily JJJ15_02470 PF09142 tRNA Pseudouridine synthase II, C terminal JJJ15_02470 PF16198 tRNA pseudouridylate synthase B C-terminal domain JJJ15_02470 PF01509 TruB family pseudouridylate synthase (N terminal domain) JJJ15_02475 PF02033 Ribosome-binding factor A JJJ15_02485 PF01580 FtsK/SpoIIIE family JJJ15_02485 PF09397 Ftsk gamma domain JJJ15_02485 PF17854 FtsK alpha domain JJJ15_02490 PF01467 Cytidylyltransferase-like JJJ15_02490 PF00294 pfkB family carbohydrate kinase JJJ15_02495 PF01336 OB-fold nucleic acid binding domain JJJ15_02495 PF16995 Transmembrane region of lysyl-tRNA synthetase JJJ15_02495 PF00152 tRNA synthetases class II (D, K and N) JJJ15_02495 PF09924 Uncharacterised conserved protein (DUF2156) JJJ15_02500 PF17770 Ribonuclease J C-terminal domain JJJ15_02500 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JJJ15_02500 PF12706 Beta-lactamase superfamily domain JJJ15_02505 PF01522 Polysaccharide deacetylase JJJ15_02530 PF00749 tRNA synthetases class I (E and Q), catalytic domain JJJ15_02540 PF00155 Aminotransferase class I and II JJJ15_02545 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJJ15_02550 PF01235 Sodium:alanine symporter family JJJ15_02555 PF01235 Sodium:alanine symporter family JJJ15_02560 PF00270 DEAD/DEAH box helicase JJJ15_02560 PF00271 Helicase conserved C-terminal domain JJJ15_02560 PF08148 DSHCT (NUC185) domain JJJ15_02565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JJJ15_02565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JJJ15_02570 PF02146 Sir2 family JJJ15_02580 PF01668 SmpB protein JJJ15_02585 PF01551 Peptidase family M23 JJJ15_02590 PF02687 FtsX-like permease family JJJ15_02590 PF18075 FtsX extracellular domain JJJ15_02595 PF00005 ABC transporter JJJ15_02620 PF00929 Exonuclease JJJ15_02625 PF00069 Protein kinase domain JJJ15_02630 PF00069 Protein kinase domain JJJ15_02635 PF00005 ABC transporter JJJ15_02635 PF01061 ABC-2 type transporter JJJ15_02635 PF00498 FHA domain JJJ15_02645 PF01063 Amino-transferase class IV JJJ15_02650 PF00180 Isocitrate/isopropylmalate dehydrogenase JJJ15_02655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JJJ15_02655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JJJ15_02660 PF10369 Small subunit of acetolactate synthase JJJ15_02660 PF01842 ACT domain JJJ15_02665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJJ15_02665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJJ15_02665 PF00205 Thiamine pyrophosphate enzyme, central domain JJJ15_02670 PF06826 Predicted Permease Membrane Region JJJ15_02670 PF02080 TrkA-C domain JJJ15_02680 PF00696 Amino acid kinase family JJJ15_02685 PF03372 Endonuclease/Exonuclease/phosphatase family JJJ15_02695 PF00708 Acylphosphatase JJJ15_02715 PF06463 Molybdenum Cofactor Synthesis C JJJ15_02715 PF04055 Radical SAM superfamily JJJ15_02725 PF02391 MoaE protein JJJ15_02730 PF03454 MoeA C-terminal region (domain IV) JJJ15_02730 PF00994 Probable molybdopterin binding domain JJJ15_02730 PF03453 MoeA N-terminal region (domain I and II) JJJ15_02735 PF01967 MoaC family JJJ15_02740 PF02542 YgbB family JJJ15_02740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JJJ15_02745 PF00994 Probable molybdopterin binding domain JJJ15_02745 PF01967 MoaC family JJJ15_02750 PF07690 Major Facilitator Superfamily JJJ15_02755 PF01568 Molydopterin dinucleotide binding domain JJJ15_02755 PF00384 Molybdopterin oxidoreductase JJJ15_02760 PF14711 Respiratory nitrate reductase beta C-terminal JJJ15_02760 PF13247 4Fe-4S dicluster domain JJJ15_02770 PF00384 Molybdopterin oxidoreductase JJJ15_02770 PF02665 Nitrate reductase gamma subunit JJJ15_02770 PF02613 Nitrate reductase delta subunit JJJ15_02780 PF00005 ABC transporter JJJ15_02780 PF03459 TOBE domain JJJ15_02785 PF00440 Bacterial regulatory proteins, tetR family JJJ15_02785 PF02909 Tetracyclin repressor-like, C-terminal domain JJJ15_02790 PF00005 ABC transporter JJJ15_02795 PF08021 Siderophore-interacting FAD-binding domain JJJ15_02795 PF00664 ABC transporter transmembrane region JJJ15_02795 PF00005 ABC transporter JJJ15_02795 PF04954 Siderophore-interacting protein JJJ15_02800 PF00005 ABC transporter JJJ15_02815 PF00899 ThiF family JJJ15_02825 PF01032 FecCD transport family JJJ15_02830 PF01032 FecCD transport family JJJ15_02840 PF00005 ABC transporter JJJ15_02850 PF02525 Flavodoxin-like fold JJJ15_02860 PF08240 Alcohol dehydrogenase GroES-like domain JJJ15_02860 PF00107 Zinc-binding dehydrogenase JJJ15_02865 PF00459 Inositol monophosphatase family JJJ15_02870 PF02673 Bacitracin resistance protein BacA JJJ15_02875 PF00149 Calcineurin-like phosphoesterase JJJ15_02875 PF12320 Type 5 capsule protein repressor C-terminal domain JJJ15_02880 PF13476 AAA domain JJJ15_02885 PF12804 MobA-like NTP transferase domain JJJ15_02890 PF00892 EamA-like transporter family JJJ15_02935 PF01043 SecA preprotein cross-linking domain JJJ15_02935 PF07516 SecA Wing and Scaffold domain JJJ15_02935 PF07517 SecA DEAD-like domain JJJ15_02940 PF00156 Phosphoribosyl transferase domain JJJ15_02945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JJJ15_02945 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JJJ15_02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_02955 PF00672 HAMP domain JJJ15_02955 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_02960 PF00486 Transcriptional regulatory protein, C terminal JJJ15_02960 PF00072 Response regulator receiver domain JJJ15_02980 PF07726 ATPase family associated with various cellular activities (AAA) JJJ15_02980 PF17863 AAA lid domain JJJ15_03000 PF03966 Trm112p-like protein JJJ15_03000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JJJ15_03025 PF02467 Transcription factor WhiB JJJ15_03035 PF01238 Phosphomannose isomerase type I JJJ15_03045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JJJ15_03045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JJJ15_03050 PF00464 Serine hydroxymethyltransferase JJJ15_03055 PF00551 Formyl transferase JJJ15_03060 PF00274 Fructose-bisphosphate aldolase class-I JJJ15_03075 PF00830 Ribosomal L28 family JJJ15_03080 PF00471 Ribosomal protein L33 JJJ15_03085 PF00253 Ribosomal protein S14p/S29e JJJ15_03090 PF01197 Ribosomal protein L31 JJJ15_03095 PF00444 Ribosomal protein L36 JJJ15_03100 PF01979 Amidohydrolase family JJJ15_03110 PF01939 Endonuclease NucS JJJ15_03120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JJJ15_03125 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJJ15_03125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJJ15_03130 PF00231 ATP synthase JJJ15_03135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJJ15_03135 PF00306 ATP synthase alpha/beta chain, C terminal domain JJJ15_03135 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJJ15_03140 PF00213 ATP synthase delta (OSCP) subunit JJJ15_03145 PF00430 ATP synthase B/B' CF(0) JJJ15_03150 PF00137 ATP synthase subunit C JJJ15_03155 PF00119 ATP synthase A chain JJJ15_03165 PF00953 Glycosyl transferase family 4 JJJ15_03170 PF01300 Telomere recombination JJJ15_03180 PF00196 Bacterial regulatory proteins, luxR family JJJ15_03180 PF00072 Response regulator receiver domain JJJ15_03200 PF01965 DJ-1/PfpI family JJJ15_03210 PF12146 Serine aminopeptidase, S33 JJJ15_03225 PF00270 DEAD/DEAH box helicase JJJ15_03225 PF00271 Helicase conserved C-terminal domain JJJ15_03230 PF01914 MarC family integral membrane protein JJJ15_03240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJJ15_03240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJJ15_03245 PF01497 Periplasmic binding protein JJJ15_03250 PF05195 Aminopeptidase P, N-terminal domain JJJ15_03250 PF00557 Metallopeptidase family M24 JJJ15_03270 PF07728 AAA domain (dynein-related subfamily) JJJ15_03285 PF16916 Dimerisation domain of Zinc Transporter JJJ15_03285 PF01545 Cation efflux family JJJ15_03290 PF01022 Bacterial regulatory protein, arsR family JJJ15_03300 PF00571 CBS domain JJJ15_03300 PF01769 Divalent cation transporter JJJ15_03300 PF03448 MgtE intracellular N domain JJJ15_03310 PF01757 Acyltransferase family JJJ15_03315 PF10609 NUBPL iron-transfer P-loop NTPase JJJ15_03315 PF01883 Iron-sulfur cluster assembly protein JJJ15_03320 PF02416 mttA/Hcf106 family JJJ15_03325 PF01596 O-methyltransferase JJJ15_03330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJJ15_03330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJJ15_03340 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_03345 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_03350 PF00334 Nucleoside diphosphate kinase JJJ15_03355 PF02875 Mur ligase family, glutamate ligase domain JJJ15_03355 PF08245 Mur ligase middle domain JJJ15_03360 PF02566 OsmC-like protein JJJ15_03370 PF00303 Thymidylate synthase JJJ15_03375 PF00186 Dihydrofolate reductase JJJ15_03380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJJ15_03400 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_03405 PF00571 CBS domain JJJ15_03405 PF00005 ABC transporter JJJ15_03410 PF00455 DeoR C terminal sensor domain JJJ15_03410 PF08220 DeoR-like helix-turn-helix domain JJJ15_03430 PF10415 Fumarase C C-terminus JJJ15_03430 PF00206 Lyase JJJ15_03435 PF04237 YjbR JJJ15_03440 PF01048 Phosphorylase superfamily JJJ15_03450 PF03747 ADP-ribosylglycohydrolase JJJ15_03495 PF17854 FtsK alpha domain JJJ15_03495 PF01580 FtsK/SpoIIIE family JJJ15_03495 PF09397 Ftsk gamma domain JJJ15_03520 PF00483 Nucleotidyl transferase JJJ15_03520 PF01050 Mannose-6-phosphate isomerase JJJ15_03535 PF08220 DeoR-like helix-turn-helix domain JJJ15_03535 PF00455 DeoR C terminal sensor domain JJJ15_03540 PF10509 Galactokinase galactose-binding signature JJJ15_03540 PF08544 GHMP kinases C terminal JJJ15_03540 PF00288 GHMP kinases N terminal domain JJJ15_03550 PF00005 ABC transporter JJJ15_03550 PF12704 MacB-like periplasmic core domain JJJ15_03555 PF00005 ABC transporter JJJ15_03555 PF12704 MacB-like periplasmic core domain JJJ15_03555 PF02687 FtsX-like permease family JJJ15_03565 PF00483 Nucleotidyl transferase JJJ15_03585 PF04991 LicD family JJJ15_03590 PF01370 NAD dependent epimerase/dehydratase family JJJ15_03595 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JJJ15_03605 PF00535 Glycosyl transferase family 2 JJJ15_03620 PF00005 ABC transporter JJJ15_03625 PF01061 ABC-2 type transporter JJJ15_03630 PF03275 UDP-galactopyranose mutase JJJ15_03635 PF17994 Galactofuranosyltransferase 2 N-terminal JJJ15_03640 PF03275 UDP-galactopyranose mutase JJJ15_03645 PF01757 Acyltransferase family JJJ15_03660 PF16363 GDP-mannose 4,6 dehydratase JJJ15_03665 PF00877 NlpC/P60 family JJJ15_03665 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JJJ15_03685 PF01370 NAD dependent epimerase/dehydratase family JJJ15_03695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JJJ15_03700 PF03816 Cell envelope-related transcriptional attenuator domain JJJ15_03705 PF03816 Cell envelope-related transcriptional attenuator domain JJJ15_03710 PF01370 NAD dependent epimerase/dehydratase family JJJ15_03715 PF00731 AIR carboxylase JJJ15_03720 PF02222 ATP-grasp domain JJJ15_03720 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JJJ15_03735 PF09335 SNARE associated Golgi protein JJJ15_03740 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_03740 PF00672 HAMP domain JJJ15_03740 PF13426 PAS domain JJJ15_03745 PF00072 Response regulator receiver domain JJJ15_03745 PF00486 Transcriptional regulatory protein, C terminal JJJ15_03750 PF16701 Adenylate cyclase regulatory domain JJJ15_03750 PF00211 Adenylate and Guanylate cyclase catalytic domain JJJ15_03760 PF02545 Maf-like protein JJJ15_03775 PF00471 Ribosomal protein L33 JJJ15_03795 PF04461 Protein of unknown function (DUF520) JJJ15_03800 PF07687 Peptidase dimerisation domain JJJ15_03800 PF01546 Peptidase family M20/M25/M40 JJJ15_03805 PF01435 Peptidase family M48 JJJ15_03820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JJJ15_03820 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JJJ15_03825 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJJ15_03855 PF03949 Malic enzyme, NAD binding domain JJJ15_03855 PF00390 Malic enzyme, N-terminal domain JJJ15_03860 PF02899 Phage integrase, N-terminal SAM-like domain JJJ15_03860 PF00589 Phage integrase family JJJ15_03865 PF17782 DprA winged helix domain JJJ15_03865 PF02481 DNA recombination-mediator protein A JJJ15_03870 PF01078 Magnesium chelatase, subunit ChlI JJJ15_03870 PF13335 Magnesium chelatase, subunit ChlI C-terminal JJJ15_03875 PF02021 Uncharacterised protein family UPF0102 JJJ15_03880 PF10611 Protein of unknown function (DUF2469) JJJ15_03885 PF01351 Ribonuclease HII JJJ15_03890 PF10502 Signal peptidase, peptidase S26 JJJ15_03895 PF01245 Ribosomal protein L19 JJJ15_03905 PF01746 tRNA (Guanine-1)-methyltransferase JJJ15_03910 PF05239 PRC-barrel domain JJJ15_03910 PF01782 RimM N-terminal domain JJJ15_03920 PF00886 Ribosomal protein S16 JJJ15_03930 PF00005 ABC transporter JJJ15_03945 PF00005 ABC transporter JJJ15_03955 PF07730 Histidine kinase JJJ15_03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_03960 PF00072 Response regulator receiver domain JJJ15_03960 PF00196 Bacterial regulatory proteins, luxR family JJJ15_03965 PF02780 Transketolase, C-terminal domain JJJ15_03965 PF00456 Transketolase, thiamine diphosphate binding domain JJJ15_03965 PF02779 Transketolase, pyrimidine binding domain JJJ15_03975 PF06745 KaiC JJJ15_03975 PF18073 Rubredoxin metal binding domain JJJ15_03980 PF02457 DisA bacterial checkpoint controller nucleotide-binding JJJ15_03980 PF12826 Helix-hairpin-helix motif JJJ15_03980 PF10635 DisA bacterial checkpoint controller linker region JJJ15_03990 PF00633 Helix-hairpin-helix motif JJJ15_03990 PF00730 HhH-GPD superfamily base excision DNA repair protein JJJ15_03990 PF10576 Iron-sulfur binding domain of endonuclease III JJJ15_04000 PF00196 Bacterial regulatory proteins, luxR family JJJ15_04000 PF00072 Response regulator receiver domain JJJ15_04010 PF01266 FAD dependent oxidoreductase JJJ15_04010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JJJ15_04015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJJ15_04015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJJ15_04020 PF00381 PTS HPr component phosphorylation site JJJ15_04025 PF14579 Helix-hairpin-helix motif JJJ15_04025 PF02811 PHP domain JJJ15_04025 PF00929 Exonuclease JJJ15_04025 PF14480 DNA polymerase III polC-type N-terminus I JJJ15_04025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JJJ15_04025 PF11490 DNA polymerase III polC-type N-terminus II JJJ15_04025 PF07733 Bacterial DNA polymerase III alpha NTPase domain JJJ15_04030 PF00478 IMP dehydrogenase / GMP reductase domain JJJ15_04030 PF00571 CBS domain JJJ15_04035 PF02467 Transcription factor WhiB JJJ15_04040 PF00166 Chaperonin 10 Kd subunit JJJ15_04045 PF02698 DUF218 domain JJJ15_04050 PF18096 THUMP domain-like JJJ15_04055 PF04107 Glutamate-cysteine ligase family 2(GCS2) JJJ15_04065 PF00814 Glycoprotease family JJJ15_04070 PF13183 4Fe-4S dicluster domain JJJ15_04070 PF13085 2Fe-2S iron-sulfur cluster binding domain JJJ15_04075 PF00890 FAD binding domain JJJ15_04075 PF02910 Fumarate reductase flavoprotein C-term JJJ15_04095 PF00814 Glycoprotease family JJJ15_04105 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JJJ15_04110 PF01168 Alanine racemase, N-terminal domain JJJ15_04110 PF00842 Alanine racemase, C-terminal domain JJJ15_04115 PF03853 YjeF-related protein N-terminus JJJ15_04115 PF01256 Carbohydrate kinase JJJ15_04120 PF01648 4'-phosphopantetheinyl transferase superfamily JJJ15_04125 PF01380 SIS domain JJJ15_04130 PF00485 Phosphoribulokinase / Uridine kinase family JJJ15_04145 PF13732 Domain of unknown function (DUF4162) JJJ15_04145 PF00005 ABC transporter JJJ15_04165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJJ15_04165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJJ15_04165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJJ15_04165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJJ15_04170 PF00380 Ribosomal protein S9/S16 JJJ15_04175 PF00572 Ribosomal protein L13 JJJ15_04180 PF01416 tRNA pseudouridine synthase JJJ15_04190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJJ15_04195 PF01196 Ribosomal protein L17 JJJ15_04200 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JJJ15_04200 PF01000 RNA polymerase Rpb3/RpoA insert domain JJJ15_04200 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JJJ15_04205 PF00411 Ribosomal protein S11 JJJ15_04210 PF00416 Ribosomal protein S13/S18 JJJ15_04215 PF00444 Ribosomal protein L36 JJJ15_04220 PF01176 Translation initiation factor 1A / IF-1 JJJ15_04235 PF00557 Metallopeptidase family M24 JJJ15_04245 PF00344 SecY translocase JJJ15_04250 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JJJ15_04255 PF00327 Ribosomal protein L30p/L7e JJJ15_04260 PF03719 Ribosomal protein S5, C-terminal domain JJJ15_04260 PF00333 Ribosomal protein S5, N-terminal domain JJJ15_04265 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JJJ15_04270 PF00347 Ribosomal protein L6 JJJ15_04275 PF00410 Ribosomal protein S8 JJJ15_04280 PF00253 Ribosomal protein S14p/S29e JJJ15_04285 PF00673 ribosomal L5P family C-terminus JJJ15_04285 PF00281 Ribosomal protein L5 JJJ15_04290 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JJJ15_04295 PF00238 Ribosomal protein L14p/L23e JJJ15_04300 PF00366 Ribosomal protein S17 JJJ15_04305 PF00831 Ribosomal L29 protein JJJ15_04310 PF00252 Ribosomal protein L16p/L10e JJJ15_04315 PF00189 Ribosomal protein S3, C-terminal domain JJJ15_04315 PF07650 KH domain JJJ15_04320 PF00237 Ribosomal protein L22p/L17e JJJ15_04325 PF00203 Ribosomal protein S19 JJJ15_04330 PF00181 Ribosomal Proteins L2, RNA binding domain JJJ15_04330 PF03947 Ribosomal Proteins L2, C-terminal domain JJJ15_04335 PF00276 Ribosomal protein L23 JJJ15_04340 PF00573 Ribosomal protein L4/L1 family JJJ15_04345 PF00297 Ribosomal protein L3 JJJ15_04350 PF00338 Ribosomal protein S10p/S20e JJJ15_04360 PF16555 Gram-positive pilin subunit D1, N-terminal domain JJJ15_04360 PF00746 LPXTG cell wall anchor motif JJJ15_04370 PF03144 Elongation factor Tu domain 2 JJJ15_04370 PF00009 Elongation factor Tu GTP binding domain JJJ15_04370 PF03143 Elongation factor Tu C-terminal domain JJJ15_04375 PF00009 Elongation factor Tu GTP binding domain JJJ15_04375 PF03764 Elongation factor G, domain IV JJJ15_04375 PF14492 Elongation Factor G, domain II JJJ15_04375 PF00679 Elongation factor G C-terminus JJJ15_04375 PF03144 Elongation factor Tu domain 2 JJJ15_04380 PF00177 Ribosomal protein S7p/S5e JJJ15_04385 PF00164 Ribosomal protein S12/S23 JJJ15_04445 PF01580 FtsK/SpoIIIE family JJJ15_04445 PF12538 DNA transporter JJJ15_04455 PF03793 PASTA domain JJJ15_04455 PF00069 Protein kinase domain JJJ15_04485 PF07726 ATPase family associated with various cellular activities (AAA) JJJ15_04485 PF17863 AAA lid domain JJJ15_04590 PF00092 von Willebrand factor type A domain JJJ15_04615 PF00196 Bacterial regulatory proteins, luxR family JJJ15_04615 PF00072 Response regulator receiver domain JJJ15_04640 PF00004 ATPase family associated with various cellular activities (AAA) JJJ15_04640 PF17862 AAA+ lid domain JJJ15_04640 PF01434 Peptidase family M41 JJJ15_04675 PF01580 FtsK/SpoIIIE family JJJ15_04680 PF04998 RNA polymerase Rpb1, domain 5 JJJ15_04680 PF04997 RNA polymerase Rpb1, domain 1 JJJ15_04680 PF00623 RNA polymerase Rpb1, domain 2 JJJ15_04680 PF05000 RNA polymerase Rpb1, domain 4 JJJ15_04680 PF04983 RNA polymerase Rpb1, domain 3 JJJ15_04685 PF04560 RNA polymerase Rpb2, domain 7 JJJ15_04685 PF10385 RNA polymerase beta subunit external 1 domain JJJ15_04685 PF00562 RNA polymerase Rpb2, domain 6 JJJ15_04685 PF04565 RNA polymerase Rpb2, domain 3 JJJ15_04685 PF04563 RNA polymerase beta subunit JJJ15_04685 PF04561 RNA polymerase Rpb2, domain 2 JJJ15_04690 PF16320 Ribosomal protein L7/L12 dimerisation domain JJJ15_04690 PF00542 Ribosomal protein L7/L12 C-terminal domain JJJ15_04695 PF00466 Ribosomal protein L10 JJJ15_04705 PF00687 Ribosomal protein L1p/L10e family JJJ15_04710 PF03946 Ribosomal protein L11, N-terminal domain JJJ15_04710 PF00298 Ribosomal protein L11, RNA binding domain JJJ15_04715 PF02357 Transcription termination factor nusG JJJ15_04720 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JJJ15_04730 PF00155 Aminotransferase class I and II JJJ15_04740 PF01209 ubiE/COQ5 methyltransferase family JJJ15_04745 PF00425 chorismate binding enzyme JJJ15_04750 PF13180 PDZ domain JJJ15_04755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJJ15_04755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJJ15_04760 PF18374 Enolase N-terminal domain-like JJJ15_04760 PF13378 Enolase C-terminal domain-like JJJ15_04765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJJ15_04765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJJ15_04780 PF00378 Enoyl-CoA hydratase/isomerase JJJ15_04785 PF07274 Protein of unknown function (DUF1440) JJJ15_04790 PF01040 UbiA prenyltransferase family JJJ15_04795 PF13193 AMP-binding enzyme C-terminal domain JJJ15_04795 PF00501 AMP-binding enzyme JJJ15_04810 PF00300 Histidine phosphatase superfamily (branch 1) JJJ15_04815 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JJJ15_04815 PF14602 Hexapeptide repeat of succinyl-transferase JJJ15_04825 PF00285 Citrate synthase, C-terminal domain JJJ15_04830 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JJJ15_04835 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JJJ15_04840 PF00155 Aminotransferase class I and II JJJ15_04845 PF00037 4Fe-4S binding domain JJJ15_04855 PF00009 Elongation factor Tu GTP binding domain JJJ15_04855 PF14492 Elongation Factor G, domain II JJJ15_04855 PF03144 Elongation factor Tu domain 2 JJJ15_04855 PF00679 Elongation factor G C-terminus JJJ15_04865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJJ15_04875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJJ15_04875 PF00005 ABC transporter JJJ15_04880 PF12911 N-terminal TM domain of oligopeptide transport permease C JJJ15_04880 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_04885 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_04890 PF00005 ABC transporter JJJ15_04890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJJ15_04895 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_04895 PF12911 N-terminal TM domain of oligopeptide transport permease C JJJ15_04900 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_04905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJJ15_04910 PF00296 Luciferase-like monooxygenase JJJ15_04930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJJ15_04935 PF02127 Aminopeptidase I zinc metalloprotease (M18) JJJ15_04995 PF00899 ThiF family JJJ15_05015 PF17871 AAA lid domain JJJ15_05015 PF07724 AAA domain (Cdc48 subfamily) JJJ15_05015 PF00004 ATPase family associated with various cellular activities (AAA) JJJ15_05015 PF10431 C-terminal, D2-small domain, of ClpB protein JJJ15_05015 PF02861 Clp amino terminal domain, pathogenicity island component JJJ15_05135 PF02665 Nitrate reductase gamma subunit JJJ15_05135 PF13183 4Fe-4S dicluster domain JJJ15_05135 PF02754 Cysteine-rich domain JJJ15_05145 PF00005 ABC transporter JJJ15_05150 PF00664 ABC transporter transmembrane region JJJ15_05150 PF00005 ABC transporter JJJ15_05150 PF08021 Siderophore-interacting FAD-binding domain JJJ15_05150 PF04954 Siderophore-interacting protein JJJ15_05155 PF00440 Bacterial regulatory proteins, tetR family JJJ15_05155 PF13305 Tetracyclin repressor-like, C-terminal domain JJJ15_05165 PF00754 F5/8 type C domain JJJ15_05165 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase JJJ15_05165 PF13088 BNR repeat-like domain JJJ15_05180 PF00005 ABC transporter JJJ15_05190 PF01297 Zinc-uptake complex component A periplasmic JJJ15_05200 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain JJJ15_05200 PF08531 Alpha-L-rhamnosidase N-terminal domain JJJ15_05200 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain JJJ15_05200 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain JJJ15_05205 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JJJ15_05205 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JJJ15_05215 PF02378 Phosphotransferase system, EIIC JJJ15_05215 PF00367 phosphotransferase system, EIIB JJJ15_05215 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JJJ15_05220 PF07724 AAA domain (Cdc48 subfamily) JJJ15_05220 PF00004 ATPase family associated with various cellular activities (AAA) JJJ15_05220 PF10431 C-terminal, D2-small domain, of ClpB protein JJJ15_05220 PF02861 Clp amino terminal domain, pathogenicity island component JJJ15_05220 PF17871 AAA lid domain JJJ15_05245 PF13411 MerR HTH family regulatory protein JJJ15_05250 PF01556 DnaJ C terminal domain JJJ15_05250 PF00684 DnaJ central domain JJJ15_05250 PF00226 DnaJ domain JJJ15_05255 PF01025 GrpE JJJ15_05260 PF00012 Hsp70 protein JJJ15_05270 PF00005 ABC transporter JJJ15_05280 PF00196 Bacterial regulatory proteins, luxR family JJJ15_05280 PF00072 Response regulator receiver domain JJJ15_05290 PF11774 Lsr2 JJJ15_05305 PF00437 Type II/IV secretion system protein JJJ15_05350 PF00069 Protein kinase domain JJJ15_05350 PF00400 WD domain, G-beta repeat JJJ15_05355 PF00005 ABC transporter JJJ15_05355 PF17912 MalK OB fold domain JJJ15_05380 PF03591 AzlC protein JJJ15_05390 PF00561 alpha/beta hydrolase fold JJJ15_05395 PF00633 Helix-hairpin-helix motif JJJ15_05395 PF10576 Iron-sulfur binding domain of endonuclease III JJJ15_05395 PF00730 HhH-GPD superfamily base excision DNA repair protein JJJ15_05400 PF00027 Cyclic nucleotide-binding domain JJJ15_05400 PF13545 Crp-like helix-turn-helix domain JJJ15_05410 PF02467 Transcription factor WhiB JJJ15_05415 PF00912 Transglycosylase JJJ15_05415 PF00905 Penicillin binding protein transpeptidase domain JJJ15_05415 PF17092 Penicillin-binding protein OB-like domain JJJ15_05420 PF00149 Calcineurin-like phosphoesterase JJJ15_05500 PF01381 Helix-turn-helix JJJ15_05545 PF08245 Mur ligase middle domain JJJ15_05545 PF08353 Domain of unknown function (DUF1727) JJJ15_05550 PF07685 CobB/CobQ-like glutamine amidotransferase domain JJJ15_05570 PF13087 AAA domain JJJ15_05570 PF13086 AAA domain JJJ15_05570 PF13195 Protein of unknown function (DUF4011) JJJ15_05570 PF13195 Protein of unknown function (DUF4011) JJJ15_05570 PF13087 AAA domain JJJ15_05570 PF13086 AAA domain JJJ15_05575 PF12169 DNA polymerase III subunits gamma and tau domain III JJJ15_05580 PF02132 RecR protein JJJ15_05580 PF13662 Toprim domain JJJ15_05585 PF07739 TipAS antibiotic-recognition domain JJJ15_05585 PF13411 MerR HTH family regulatory protein JJJ15_05595 PF00005 ABC transporter JJJ15_05630 PF01842 ACT domain JJJ15_05630 PF13840 ACT domain JJJ15_05630 PF00696 Amino acid kinase family JJJ15_05635 PF02774 Semialdehyde dehydrogenase, dimerisation domain JJJ15_05635 PF01118 Semialdehyde dehydrogenase, NAD binding domain JJJ15_05645 PF02675 S-adenosylmethionine decarboxylase JJJ15_05670 PF03949 Malic enzyme, NAD binding domain JJJ15_05670 PF00390 Malic enzyme, N-terminal domain JJJ15_05675 PF01380 SIS domain JJJ15_05675 PF01418 Helix-turn-helix domain, rpiR family JJJ15_05680 PF00950 ABC 3 transport family JJJ15_05685 PF00950 ABC 3 transport family JJJ15_05690 PF00005 ABC transporter JJJ15_05695 PF01297 Zinc-uptake complex component A periplasmic JJJ15_05700 PF00085 Thioredoxin JJJ15_05720 PF00440 Bacterial regulatory proteins, tetR family JJJ15_05720 PF17933 Tetracyclin repressor-like, C-terminal domain JJJ15_05725 PF00005 ABC transporter JJJ15_05725 PF13732 Domain of unknown function (DUF4162) JJJ15_05765 PF00860 Permease family JJJ15_05775 PF08032 RNA 2'-O ribose methyltransferase substrate binding JJJ15_05775 PF00588 SpoU rRNA Methylase family JJJ15_05780 PF09190 DALR domain JJJ15_05780 PF01406 tRNA synthetases class I (C) catalytic domain JJJ15_05785 PF02542 YgbB family JJJ15_05790 PF05958 tRNA (Uracil-5-)-methyltransferase JJJ15_05815 PF00440 Bacterial regulatory proteins, tetR family JJJ15_05840 PF00535 Glycosyl transferase family 2 JJJ15_05845 PF00005 ABC transporter JJJ15_05845 PF12848 ABC transporter JJJ15_05845 PF16326 ABC transporter C-terminal domain JJJ15_05850 PF00288 GHMP kinases N terminal domain JJJ15_05850 PF08544 GHMP kinases C terminal JJJ15_05855 PF00398 Ribosomal RNA adenine dimethylase JJJ15_05870 PF01026 TatD related DNase JJJ15_05875 PF09334 tRNA synthetases class I (M) JJJ15_05885 PF00857 Isochorismatase family JJJ15_05890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJJ15_05905 PF17763 Glutaminase/Asparaginase C-terminal domain JJJ15_05905 PF00710 Asparaginase, N-terminal JJJ15_05910 PF08386 TAP-like protein JJJ15_05910 PF00561 alpha/beta hydrolase fold JJJ15_05915 PF09115 DNA polymerase III, delta subunit, C terminal JJJ15_05920 PF02223 Thymidylate kinase JJJ15_05935 PF01906 Putative heavy-metal-binding JJJ15_05945 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JJJ15_05950 PF02559 CarD-like/TRCF domain JJJ15_05955 PF00486 Transcriptional regulatory protein, C terminal JJJ15_05955 PF00072 Response regulator receiver domain JJJ15_05960 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_05965 PF01895 PhoU domain JJJ15_05970 PF02709 N-terminal domain of galactosyltransferase JJJ15_05970 PF00535 Glycosyl transferase family 2 JJJ15_05975 PF02384 N-6 DNA Methylase JJJ15_05980 PF03951 Glutamine synthetase, beta-Grasp domain JJJ15_05980 PF00120 Glutamine synthetase, catalytic domain JJJ15_05985 PF01757 Acyltransferase family JJJ15_06000 PF02559 CarD-like/TRCF domain JJJ15_06000 PF00270 DEAD/DEAH box helicase JJJ15_06000 PF00271 Helicase conserved C-terminal domain JJJ15_06000 PF03461 TRCF domain JJJ15_06000 PF17757 UvrB interaction domain JJJ15_06030 PF00069 Protein kinase domain JJJ15_06050 PF07726 ATPase family associated with various cellular activities (AAA) JJJ15_06050 PF17863 AAA lid domain JJJ15_06060 PF01467 Cytidylyltransferase-like JJJ15_06060 PF00294 pfkB family carbohydrate kinase JJJ15_06065 PF02397 Bacterial sugar transferase JJJ15_06085 PF13439 Glycosyltransferase Family 4 JJJ15_06085 PF00534 Glycosyl transferases group 1 JJJ15_06145 PF00155 Aminotransferase class I and II JJJ15_06150 PF01053 Cys/Met metabolism PLP-dependent enzyme JJJ15_06160 PF07669 Eco57I restriction-modification methylase JJJ15_06175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JJJ15_06175 PF14572 Phosphoribosyl synthetase-associated domain JJJ15_06180 PF12804 MobA-like NTP transferase domain JJJ15_06190 PF13419 Haloacid dehalogenase-like hydrolase JJJ15_06205 PF00795 Carbon-nitrogen hydrolase JJJ15_06205 PF02540 NAD synthase JJJ15_06210 PF03009 Glycerophosphoryl diester phosphodiesterase family JJJ15_06220 PF05922 Peptidase inhibitor I9 JJJ15_06220 PF13860 FlgD Ig-like domain JJJ15_06220 PF00082 Subtilase family JJJ15_06220 PF02225 PA domain JJJ15_06240 PF01547 Bacterial extracellular solute-binding protein JJJ15_06250 PF02403 Seryl-tRNA synthetase N-terminal domain JJJ15_06250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJJ15_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJJ15_06260 PF03466 LysR substrate binding domain JJJ15_06270 PF18019 HD domain JJJ15_06270 PF00270 DEAD/DEAH box helicase JJJ15_06270 PF00271 Helicase conserved C-terminal domain JJJ15_06295 PF01842 ACT domain JJJ15_06295 PF00800 Prephenate dehydratase JJJ15_06315 PF00268 Ribonucleotide reductase, small chain JJJ15_06325 PF02378 Phosphotransferase system, EIIC JJJ15_06325 PF00367 phosphotransferase system, EIIB JJJ15_06330 PF01380 SIS domain JJJ15_06335 PF01380 SIS domain JJJ15_06335 PF01418 Helix-turn-helix domain, rpiR family JJJ15_06340 PF00356 Bacterial regulatory proteins, lacI family JJJ15_06345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JJJ15_06345 PF00703 Glycosyl hydrolases family 2 JJJ15_06345 PF16353 Domain of unknown function(DUF4981) JJJ15_06345 PF02929 Beta galactosidase small chain JJJ15_06345 PF02837 Glycosyl hydrolases family 2, sugar binding domain JJJ15_06365 PF02661 Fic/DOC family JJJ15_06365 PF12728 Helix-turn-helix domain JJJ15_06370 PF01758 Sodium Bile acid symporter family JJJ15_06380 PF12728 Helix-turn-helix domain JJJ15_06400 PF00989 PAS fold JJJ15_06400 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_06410 PF00939 Sodium:sulfate symporter transmembrane region JJJ15_06440 PF01497 Periplasmic binding protein JJJ15_06445 PF01032 FecCD transport family JJJ15_06450 PF01032 FecCD transport family JJJ15_06455 PF00005 ABC transporter JJJ15_06465 PF02664 S-Ribosylhomocysteinase (LuxS) JJJ15_06475 PF00072 Response regulator receiver domain JJJ15_06475 PF00486 Transcriptional regulatory protein, C terminal JJJ15_06480 PF00672 HAMP domain JJJ15_06480 PF18698 Histidine kinase sensor domain JJJ15_06480 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_06480 PF00989 PAS fold JJJ15_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_06485 PF00223 Photosystem I psaA/psaB protein JJJ15_06485 PF00691 OmpA family JJJ15_06490 PF01048 Phosphorylase superfamily JJJ15_06495 PF00391 PEP-utilising enzyme, mobile domain JJJ15_06495 PF03610 PTS system fructose IIA component JJJ15_06495 PF00381 PTS HPr component phosphorylation site JJJ15_06495 PF05524 PEP-utilising enzyme, N-terminal JJJ15_06500 PF02734 DAK2 domain JJJ15_06515 PF00440 Bacterial regulatory proteins, tetR family JJJ15_06585 PF17191 RecG wedge domain JJJ15_06585 PF00270 DEAD/DEAH box helicase JJJ15_06585 PF13749 Putative ATP-dependent DNA helicase recG C-terminal JJJ15_06590 PF08343 Ribonucleotide reductase N-terminal JJJ15_06590 PF00317 Ribonucleotide reductase, all-alpha domain JJJ15_06590 PF02867 Ribonucleotide reductase, barrel domain JJJ15_06595 PF07972 NrdI Flavodoxin like JJJ15_06600 PF00462 Glutaredoxin JJJ15_06605 PF08279 HTH domain JJJ15_06605 PF02829 3H domain JJJ15_06620 PF01042 Endoribonuclease L-PSP JJJ15_06635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJJ15_06635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJJ15_06635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJJ15_06635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJJ15_06645 PF00005 ABC transporter JJJ15_06655 PF00196 Bacterial regulatory proteins, luxR family JJJ15_06655 PF00072 Response regulator receiver domain JJJ15_06695 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JJJ15_06710 PF00155 Aminotransferase class I and II JJJ15_06730 PF03051 Peptidase C1-like family JJJ15_06745 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_06750 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_06755 PF01547 Bacterial extracellular solute-binding protein JJJ15_06770 PF00356 Bacterial regulatory proteins, lacI family JJJ15_06775 PF00356 Bacterial regulatory proteins, lacI family JJJ15_06790 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JJJ15_06800 PF02583 Metal-sensitive transcriptional repressor JJJ15_06810 PF00403 Heavy-metal-associated domain JJJ15_06830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJJ15_06830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJJ15_06835 PF00266 Aminotransferase class-V JJJ15_06850 PF01743 Poly A polymerase head domain JJJ15_06850 PF12627 Probable RNA and SrmB- binding site of polymerase A JJJ15_06850 PF13735 tRNA nucleotidyltransferase domain 2 putative JJJ15_06855 PF00293 NUDIX domain JJJ15_06865 PF03023 Lipid II flippase MurJ JJJ15_06870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJJ15_06885 PF00085 Thioredoxin JJJ15_06895 PF14821 Threonine synthase N terminus JJJ15_06895 PF00291 Pyridoxal-phosphate dependent enzyme JJJ15_06905 PF00107 Zinc-binding dehydrogenase JJJ15_06905 PF08240 Alcohol dehydrogenase GroES-like domain JJJ15_06910 PF00155 Aminotransferase class I and II JJJ15_06915 PF07478 D-ala D-ala ligase C-terminus JJJ15_06915 PF01820 D-ala D-ala ligase N-terminus JJJ15_06920 PF17762 HTH domain found in ParB protein JJJ15_06920 PF02195 ParB-like nuclease domain JJJ15_06925 PF13614 AAA domain JJJ15_06930 PF02527 rRNA small subunit methyltransferase G JJJ15_06940 PF02096 60Kd inner membrane protein JJJ15_06945 PF01809 Putative membrane protein insertion efficiency factor JJJ15_06950 PF00825 Ribonuclease P JJJ15_06955 PF00468 Ribosomal protein L34 JJJ15_06960 PF00308 Bacterial dnaA protein JJJ15_06960 PF08299 Bacterial dnaA protein helix-turn-helix JJJ15_06965 PF02768 DNA polymerase III beta subunit, C-terminal domain JJJ15_06965 PF02767 DNA polymerase III beta subunit, central domain JJJ15_06965 PF00712 DNA polymerase III beta subunit, N-terminal domain JJJ15_06970 PF02463 RecF/RecN/SMC N terminal domain JJJ15_06975 PF05258 Dna[CI] antecedent, DciA JJJ15_06980 PF00005 ABC transporter JJJ15_06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_06995 PF00986 DNA gyrase B subunit, carboxyl terminus JJJ15_06995 PF01751 Toprim domain JJJ15_06995 PF00204 DNA gyrase B JJJ15_07000 PF03989 DNA gyrase C-terminal domain, beta-propeller JJJ15_07000 PF00521 DNA gyrase/topoisomerase IV, subunit A JJJ15_07005 PF12089 Transmembrane domain of unknown function (DUF3566) JJJ15_07065 PF13657 HipA N-terminal domain JJJ15_07065 PF07804 HipA-like C-terminal domain JJJ15_07075 PF03315 Serine dehydratase beta chain JJJ15_07075 PF03313 Serine dehydratase alpha chain JJJ15_07080 PF08543 Phosphomethylpyrimidine kinase JJJ15_07090 PF12401 Protein of unknown function (DUF2662) JJJ15_07090 PF00498 FHA domain JJJ15_07095 PF16697 Inner membrane component of T3SS, cytoplasmic domain JJJ15_07105 PF01098 Cell cycle protein JJJ15_07110 PF00905 Penicillin binding protein transpeptidase domain JJJ15_07120 PF03793 PASTA domain JJJ15_07120 PF00069 Protein kinase domain JJJ15_07125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JJJ15_07130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JJJ15_07140 PF06965 Na+/H+ antiporter 1 JJJ15_07140 PF13462 Thioredoxin JJJ15_07145 PF00480 ROK family JJJ15_07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_07160 PF07730 Histidine kinase JJJ15_07160 PF05231 MASE1 JJJ15_07175 PF08241 Methyltransferase domain JJJ15_07185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JJJ15_07200 PF04203 Sortase domain JJJ15_07210 PF00155 Aminotransferase class I and II JJJ15_07215 PF08240 Alcohol dehydrogenase GroES-like domain JJJ15_07215 PF00107 Zinc-binding dehydrogenase JJJ15_07235 PF00689 Cation transporting ATPase, C-terminus JJJ15_07235 PF00690 Cation transporter/ATPase, N-terminus JJJ15_07245 PF01658 Myo-inositol-1-phosphate synthase JJJ15_07250 PF00905 Penicillin binding protein transpeptidase domain JJJ15_07250 PF00912 Transglycosylase JJJ15_07255 PF01250 Ribosomal protein S6 JJJ15_07260 PF00436 Single-strand binding protein family JJJ15_07265 PF01084 Ribosomal protein S18 JJJ15_07270 PF01281 Ribosomal protein L9, N-terminal domain JJJ15_07270 PF03948 Ribosomal protein L9, C-terminal domain JJJ15_07285 PF01554 MatE JJJ15_07290 PF00772 DnaB-like helicase N terminal domain JJJ15_07290 PF03796 DnaB-like helicase C terminal domain JJJ15_07315 PF00271 Helicase conserved C-terminal domain JJJ15_07315 PF12419 SNF2 Helicase protein JJJ15_07315 PF00176 SNF2 family N-terminal domain JJJ15_07360 PF01850 PIN domain JJJ15_07365 PF17827 PrmC N-terminal domain JJJ15_07365 PF05175 Methyltransferase small domain JJJ15_07395 PF01451 Low molecular weight phosphotyrosine protein phosphatase JJJ15_07405 PF00589 Phage integrase family JJJ15_07425 PF12307 Protein of unknown function (DUF3631) JJJ15_07440 PF14437 MafB19-like deaminase JJJ15_07440 PF01171 PP-loop family JJJ15_07440 PF11734 TilS substrate C-terminal domain JJJ15_07475 PF00005 ABC transporter JJJ15_07485 PF04408 Helicase associated domain (HA2) JJJ15_07485 PF00270 DEAD/DEAH box helicase JJJ15_07485 PF08482 ATP-dependent helicase C-terminal JJJ15_07485 PF00271 Helicase conserved C-terminal domain JJJ15_07500 PF03714 Bacterial pullanase-associated domain JJJ15_07500 PF11852 Domain of unknown function (DUF3372) JJJ15_07500 PF18494 Pullulanase Ins domain JJJ15_07500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJJ15_07500 PF17967 Pullulanase N2 domain JJJ15_07505 PF03852 DNA mismatch endonuclease Vsr JJJ15_07510 PF02540 NAD synthase JJJ15_07510 PF00958 GMP synthase C terminal domain JJJ15_07510 PF00117 Glutamine amidotransferase class-I JJJ15_07530 PF00145 C-5 cytosine-specific DNA methylase JJJ15_07585 PF03781 Sulfatase-modifying factor enzyme 1 JJJ15_07595 PF00440 Bacterial regulatory proteins, tetR family JJJ15_07600 PF07690 Major Facilitator Superfamily JJJ15_07605 PF18494 Pullulanase Ins domain JJJ15_07605 PF17967 Pullulanase N2 domain JJJ15_07605 PF11852 Domain of unknown function (DUF3372) JJJ15_07605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJJ15_07605 PF03714 Bacterial pullanase-associated domain JJJ15_07610 PF13460 NAD(P)H-binding JJJ15_07630 PF00156 Phosphoribosyl transferase domain JJJ15_07635 PF02463 RecF/RecN/SMC N terminal domain JJJ15_07645 PF06826 Predicted Permease Membrane Region JJJ15_07645 PF02080 TrkA-C domain JJJ15_07650 PF08281 Sigma-70, region 4 JJJ15_07650 PF04542 Sigma-70 region 2 JJJ15_07670 PF13732 Domain of unknown function (DUF4162) JJJ15_07670 PF00005 ABC transporter JJJ15_07680 PF00571 CBS domain JJJ15_07680 PF00478 IMP dehydrogenase / GMP reductase domain JJJ15_07690 PF08501 Shikimate dehydrogenase substrate binding domain JJJ15_07710 PF02397 Bacterial sugar transferase JJJ15_07735 PF03102 NeuB family JJJ15_07735 PF08666 SAF domain JJJ15_07740 PF02348 Cytidylyltransferase JJJ15_07755 PF00535 Glycosyl transferase family 2 JJJ15_07770 PF00005 ABC transporter JJJ15_07770 PF00664 ABC transporter transmembrane region JJJ15_07790 PF01751 Toprim domain JJJ15_07790 PF01131 DNA topoisomerase JJJ15_07790 PF13368 Topoisomerase C-terminal repeat JJJ15_07855 PF01741 Large-conductance mechanosensitive channel, MscL JJJ15_07865 PF01812 5-formyltetrahydrofolate cyclo-ligase family JJJ15_07870 PF03454 MoeA C-terminal region (domain IV) JJJ15_07870 PF03453 MoeA N-terminal region (domain I and II) JJJ15_07870 PF00994 Probable molybdopterin binding domain JJJ15_07885 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_07885 PF00672 HAMP domain JJJ15_07890 PF00072 Response regulator receiver domain JJJ15_07890 PF00486 Transcriptional regulatory protein, C terminal JJJ15_07905 PF03167 Uracil DNA glycosylase superfamily JJJ15_07920 PF00118 TCP-1/cpn60 chaperonin family JJJ15_07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_07935 PF00672 HAMP domain JJJ15_07935 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_07940 PF00072 Response regulator receiver domain JJJ15_07940 PF00486 Transcriptional regulatory protein, C terminal JJJ15_07950 PF00117 Glutamine amidotransferase class-I JJJ15_07950 PF02540 NAD synthase JJJ15_07950 PF00958 GMP synthase C terminal domain JJJ15_07960 PF04536 TPM domain JJJ15_07965 PF04012 PspA/IM30 family JJJ15_07990 PF00271 Helicase conserved C-terminal domain JJJ15_07990 PF04851 Type III restriction enzyme, res subunit JJJ15_08000 PF11228 Protein of unknown function (DUF3027) JJJ15_08005 PF00860 Permease family JJJ15_08015 PF02742 Iron dependent repressor, metal binding and dimerisation domain JJJ15_08015 PF01325 Iron dependent repressor, N-terminal DNA binding domain JJJ15_08015 PF18357 Diphteria toxin repressor SH3 domain JJJ15_08020 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JJJ15_08020 PF00877 NlpC/P60 family JJJ15_08025 PF00582 Universal stress protein family JJJ15_08035 PF00300 Histidine phosphatase superfamily (branch 1) JJJ15_08040 PF00113 Enolase, C-terminal TIM barrel domain JJJ15_08040 PF03952 Enolase, N-terminal domain JJJ15_08075 PF02541 Ppx/GppA phosphatase family JJJ15_08080 PF01487 Type I 3-dehydroquinase JJJ15_08100 PF13614 AAA domain JJJ15_08105 PF03816 Cell envelope-related transcriptional attenuator domain JJJ15_08110 PF00005 ABC transporter JJJ15_08110 PF08402 TOBE domain JJJ15_08115 PF01386 Ribosomal L25p family JJJ15_08115 PF14693 Ribosomal protein TL5, C-terminal domain JJJ15_08120 PF01195 Peptidyl-tRNA hydrolase JJJ15_08125 PF00072 Response regulator receiver domain JJJ15_08125 PF00196 Bacterial regulatory proteins, luxR family JJJ15_08140 PF00005 ABC transporter JJJ15_08150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJJ15_08165 PF00920 Dehydratase family JJJ15_08190 PF00291 Pyridoxal-phosphate dependent enzyme JJJ15_08190 PF00585 C-terminal regulatory domain of Threonine dehydratase JJJ15_08195 PF03358 NADPH-dependent FMN reductase JJJ15_08205 PF01757 Acyltransferase family JJJ15_08215 PF01625 Peptide methionine sulfoxide reductase JJJ15_08220 PF01272 Transcription elongation factor, GreA/GreB, C-term JJJ15_08220 PF03449 Transcription elongation factor, N-terminal JJJ15_08225 PF03976 Polyphosphate kinase 2 (PPK2) JJJ15_08230 PF03006 Haemolysin-III related JJJ15_08235 PF01255 Putative undecaprenyl diphosphate synthase JJJ15_08240 PF13638 PIN domain JJJ15_08240 PF02562 PhoH-like protein JJJ15_08245 PF00294 pfkB family carbohydrate kinase JJJ15_08250 PF02609 Exonuclease VII small subunit JJJ15_08255 PF02601 Exonuclease VII, large subunit JJJ15_08255 PF13742 OB-fold nucleic acid binding domain JJJ15_08260 PF02401 LytB protein JJJ15_08265 PF00069 Protein kinase domain JJJ15_08380 PF12538 DNA transporter JJJ15_08380 PF01580 FtsK/SpoIIIE family JJJ15_08455 PF06071 Protein of unknown function (DUF933) JJJ15_08455 PF01926 50S ribosome-binding GTPase JJJ15_08460 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain JJJ15_08460 PF01113 Dihydrodipicolinate reductase, N-terminus JJJ15_08475 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_08480 PF00005 ABC transporter JJJ15_08480 PF08402 TOBE domain JJJ15_08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_08495 PF00183 Hsp90 protein JJJ15_08505 PF12911 N-terminal TM domain of oligopeptide transport permease C JJJ15_08505 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_08510 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_08520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJJ15_08520 PF00005 ABC transporter JJJ15_08525 PF07885 Ion channel JJJ15_08530 PF00271 Helicase conserved C-terminal domain JJJ15_08530 PF00270 DEAD/DEAH box helicase JJJ15_08530 PF04408 Helicase associated domain (HA2) JJJ15_08530 PF00270 DEAD/DEAH box helicase JJJ15_08530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JJJ15_08530 PF11898 Domain of unknown function (DUF3418) JJJ15_08530 PF04408 Helicase associated domain (HA2) JJJ15_08530 PF11898 Domain of unknown function (DUF3418) JJJ15_08530 PF00271 Helicase conserved C-terminal domain JJJ15_08530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JJJ15_08540 PF02502 Ribose/Galactose Isomerase JJJ15_08545 PF00069 Protein kinase domain JJJ15_08565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJJ15_08575 PF11066 Protein of unknown function (DUF2867) JJJ15_08575 PF13460 NAD(P)H-binding JJJ15_08595 PF07690 Major Facilitator Superfamily JJJ15_08605 PF00485 Phosphoribulokinase / Uridine kinase family JJJ15_08625 PF00664 ABC transporter transmembrane region JJJ15_08625 PF00005 ABC transporter JJJ15_08625 PF08021 Siderophore-interacting FAD-binding domain JJJ15_08625 PF04954 Siderophore-interacting protein JJJ15_08630 PF00005 ABC transporter JJJ15_08640 PF07690 Major Facilitator Superfamily JJJ15_08655 PF01545 Cation efflux family JJJ15_08655 PF16916 Dimerisation domain of Zinc Transporter JJJ15_08660 PF03458 UPF0126 domain JJJ15_08670 PF00480 ROK family JJJ15_08685 PF09594 Glycosyltransferase family 87 JJJ15_08700 PF07726 ATPase family associated with various cellular activities (AAA) JJJ15_08700 PF17863 AAA lid domain JJJ15_08735 PF00293 NUDIX domain JJJ15_08760 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase JJJ15_08760 PF13088 BNR repeat-like domain JJJ15_08760 PF00754 F5/8 type C domain JJJ15_08765 PF00929 Exonuclease JJJ15_08765 PF02811 PHP domain JJJ15_08765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JJJ15_08765 PF07733 Bacterial DNA polymerase III alpha NTPase domain JJJ15_08765 PF14579 Helix-hairpin-helix motif JJJ15_08775 PF02838 Glycosyl hydrolase family 20, domain 2 JJJ15_08775 PF00728 Glycosyl hydrolase family 20, catalytic domain JJJ15_08780 PF00881 Nitroreductase family JJJ15_08800 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_08805 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_08815 PF00106 short chain dehydrogenase JJJ15_08820 PF08534 Redoxin JJJ15_08825 PF00156 Phosphoribosyl transferase domain JJJ15_08835 PF00011 Hsp20/alpha crystallin family JJJ15_08840 PF01116 Fructose-bisphosphate aldolase class-II JJJ15_08855 PF00072 Response regulator receiver domain JJJ15_08855 PF00196 Bacterial regulatory proteins, luxR family JJJ15_08885 PF00005 ABC transporter JJJ15_08885 PF02687 FtsX-like permease family JJJ15_08885 PF12704 MacB-like periplasmic core domain JJJ15_08915 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_08920 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_08930 PF00709 Adenylosuccinate synthetase JJJ15_08950 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JJJ15_08950 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JJJ15_08960 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JJJ15_08960 PF02843 Phosphoribosylglycinamide synthetase, C domain JJJ15_08960 PF02844 Phosphoribosylglycinamide synthetase, N domain JJJ15_08975 PF01259 SAICAR synthetase JJJ15_09020 PF00534 Glycosyl transferases group 1 JJJ15_09035 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JJJ15_09035 PF02769 AIR synthase related protein, C-terminal domain JJJ15_09035 PF00586 AIR synthase related protein, N-terminal domain JJJ15_09050 PF07690 Major Facilitator Superfamily JJJ15_09075 PF01066 CDP-alcohol phosphatidyltransferase JJJ15_09090 PF08241 Methyltransferase domain JJJ15_09095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JJJ15_09095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JJJ15_09100 PF00455 DeoR C terminal sensor domain JJJ15_09100 PF08220 DeoR-like helix-turn-helix domain JJJ15_09105 PF00294 pfkB family carbohydrate kinase JJJ15_09110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JJJ15_09110 PF02378 Phosphotransferase system, EIIC JJJ15_09125 PF00156 Phosphoribosyl transferase domain JJJ15_09130 PF00586 AIR synthase related protein, N-terminal domain JJJ15_09130 PF02769 AIR synthase related protein, C-terminal domain JJJ15_09150 PF00664 ABC transporter transmembrane region JJJ15_09150 PF00005 ABC transporter JJJ15_09180 PF01641 SelR domain JJJ15_09200 PF00270 DEAD/DEAH box helicase JJJ15_09200 PF00271 Helicase conserved C-terminal domain JJJ15_09210 PF00005 ABC transporter JJJ15_09265 PF00005 ABC transporter JJJ15_09270 PF02219 Methylenetetrahydrofolate reductase JJJ15_09275 PF08267 Cobalamin-independent synthase, N-terminal domain JJJ15_09275 PF01717 Cobalamin-independent synthase, Catalytic domain JJJ15_09285 PF00877 NlpC/P60 family JJJ15_09285 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JJJ15_09290 PF01053 Cys/Met metabolism PLP-dependent enzyme JJJ15_09295 PF00561 alpha/beta hydrolase fold JJJ15_09305 PF00719 Inorganic pyrophosphatase JJJ15_09320 PF00156 Phosphoribosyl transferase domain JJJ15_09330 PF01867 CRISPR associated protein Cas1 JJJ15_09335 PF09827 CRISPR associated protein Cas2 JJJ15_09395 PF17862 AAA+ lid domain JJJ15_09395 PF01434 Peptidase family M41 JJJ15_09395 PF00004 ATPase family associated with various cellular activities (AAA) JJJ15_09400 PF01227 GTP cyclohydrolase I JJJ15_09450 PF00072 Response regulator receiver domain JJJ15_09450 PF00196 Bacterial regulatory proteins, luxR family JJJ15_09455 PF02687 FtsX-like permease family JJJ15_09455 PF12704 MacB-like periplasmic core domain JJJ15_09455 PF00005 ABC transporter JJJ15_09460 PF12704 MacB-like periplasmic core domain JJJ15_09460 PF00005 ABC transporter JJJ15_09460 PF02687 FtsX-like permease family JJJ15_09465 PF00809 Pterin binding enzyme JJJ15_09470 PF02152 Dihydroneopterin aldolase JJJ15_09495 PF02569 Pantoate-beta-alanine ligase JJJ15_09500 PF02261 Aspartate decarboxylase JJJ15_09520 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family JJJ15_09530 PF00854 POT family JJJ15_09535 PF01232 Mannitol dehydrogenase Rossmann domain JJJ15_09535 PF08125 Mannitol dehydrogenase C-terminal domain JJJ15_09540 PF02589 LUD domain JJJ15_09545 PF13183 4Fe-4S dicluster domain JJJ15_09545 PF11870 Domain of unknown function (DUF3390) JJJ15_09545 PF02589 LUD domain JJJ15_09550 PF02754 Cysteine-rich domain JJJ15_09555 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_09555 PF00672 HAMP domain JJJ15_09555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_09560 PF00072 Response regulator receiver domain JJJ15_09560 PF00486 Transcriptional regulatory protein, C terminal JJJ15_09575 PF00005 ABC transporter JJJ15_09580 PF02687 FtsX-like permease family JJJ15_09580 PF12704 MacB-like periplasmic core domain JJJ15_09585 PF02652 L-lactate permease JJJ15_09590 PF01914 MarC family integral membrane protein JJJ15_09595 PF01914 MarC family integral membrane protein JJJ15_09600 PF01494 FAD binding domain JJJ15_09605 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JJJ15_09610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JJJ15_09615 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JJJ15_09620 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JJJ15_09630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JJJ15_09630 PF10531 SLBB domain JJJ15_09630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JJJ15_09635 PF00384 Molybdopterin oxidoreductase JJJ15_09635 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JJJ15_09635 PF01568 Molydopterin dinucleotide binding domain JJJ15_09640 PF00146 NADH dehydrogenase JJJ15_09645 PF12838 4Fe-4S dicluster domain JJJ15_09655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JJJ15_09660 PF00361 Proton-conducting membrane transporter JJJ15_09660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JJJ15_09665 PF00361 Proton-conducting membrane transporter JJJ15_09670 PF00361 Proton-conducting membrane transporter JJJ15_09675 PF00348 Polyprenyl synthetase JJJ15_09680 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) JJJ15_09685 PF01867 CRISPR associated protein Cas1 JJJ15_09695 PF09704 CRISPR-associated protein (Cas_Cas5) JJJ15_09700 PF09344 CT1975-like protein JJJ15_09710 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) JJJ15_09715 PF18395 Cas3 C-terminal domain JJJ15_09715 PF00270 DEAD/DEAH box helicase JJJ15_09715 PF18019 HD domain JJJ15_09720 PF00266 Aminotransferase class-V JJJ15_09725 PF09297 NADH pyrophosphatase zinc ribbon domain JJJ15_09725 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JJJ15_09725 PF00293 NUDIX domain JJJ15_09730 PF00570 HRDC domain JJJ15_09730 PF00580 UvrD/REP helicase N-terminal domain JJJ15_09730 PF13361 UvrD-like helicase C-terminal domain JJJ15_09740 PF05362 Lon protease (S16) C-terminal proteolytic domain JJJ15_09740 PF13180 PDZ domain JJJ15_09760 PF03641 Possible lysine decarboxylase JJJ15_09765 PF03699 Uncharacterised protein family (UPF0182) JJJ15_09770 PF07687 Peptidase dimerisation domain JJJ15_09770 PF01546 Peptidase family M20/M25/M40 JJJ15_09775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJJ15_09775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJJ15_09775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJJ15_09775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJJ15_09780 PF00950 ABC 3 transport family JJJ15_09780 PF02742 Iron dependent repressor, metal binding and dimerisation domain JJJ15_09790 PF00005 ABC transporter JJJ15_09795 PF01297 Zinc-uptake complex component A periplasmic JJJ15_09800 PF01791 DeoC/LacD family aldolase JJJ15_09805 PF02903 Alpha amylase, N-terminal ig-like domain JJJ15_09805 PF16657 Maltogenic Amylase, C-terminal domain JJJ15_09805 PF00128 Alpha amylase, catalytic domain JJJ15_09810 PF00106 short chain dehydrogenase JJJ15_09835 PF00005 ABC transporter JJJ15_09840 PF02687 FtsX-like permease family JJJ15_09840 PF12704 MacB-like periplasmic core domain JJJ15_09855 PF07690 Major Facilitator Superfamily JJJ15_09865 PF02386 Cation transport protein JJJ15_09870 PF12728 Helix-turn-helix domain JJJ15_09880 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JJJ15_09880 PF01565 FAD binding domain JJJ15_09890 PF17941 Polyphosphate kinase C-terminal domain 1 JJJ15_09890 PF13089 Polyphosphate kinase N-terminal domain JJJ15_09890 PF02503 Polyphosphate kinase middle domain JJJ15_09890 PF13090 Polyphosphate kinase C-terminal domain 2 JJJ15_09895 PF00300 Histidine phosphatase superfamily (branch 1) JJJ15_09895 PF00293 NUDIX domain JJJ15_09900 PF00005 ABC transporter JJJ15_09915 PF00486 Transcriptional regulatory protein, C terminal JJJ15_09930 PF13732 Domain of unknown function (DUF4162) JJJ15_09930 PF00005 ABC transporter JJJ15_09940 PF02463 RecF/RecN/SMC N terminal domain JJJ15_09940 PF06470 SMC proteins Flexible Hinge Domain JJJ15_09960 PF00448 SRP54-type protein, GTPase domain JJJ15_09960 PF02881 SRP54-type protein, helical bundle domain JJJ15_09970 PF00196 Bacterial regulatory proteins, luxR family JJJ15_09970 PF00072 Response regulator receiver domain JJJ15_09975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_09975 PF07730 Histidine kinase JJJ15_09985 PF00005 ABC transporter JJJ15_09990 PF02978 Signal peptide binding domain JJJ15_09990 PF02881 SRP54-type protein, helical bundle domain JJJ15_09990 PF00448 SRP54-type protein, GTPase domain JJJ15_09995 PF02806 Alpha amylase, C-terminal all-beta domain JJJ15_09995 PF00128 Alpha amylase, catalytic domain JJJ15_09995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJJ15_10000 PF18085 Maltokinase N-terminal cap domain JJJ15_10000 PF01636 Phosphotransferase enzyme family JJJ15_10005 PF00128 Alpha amylase, catalytic domain JJJ15_10005 PF11896 Domain of unknown function (DUF3416) JJJ15_10010 PF00664 ABC transporter transmembrane region JJJ15_10010 PF00005 ABC transporter JJJ15_10015 PF00664 ABC transporter transmembrane region JJJ15_10015 PF00005 ABC transporter JJJ15_10025 PF00579 tRNA synthetases class I (W and Y) JJJ15_10035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JJJ15_10035 PF00128 Alpha amylase, catalytic domain JJJ15_10040 PF01012 Electron transfer flavoprotein domain JJJ15_10045 PF00766 Electron transfer flavoprotein FAD-binding domain JJJ15_10045 PF01012 Electron transfer flavoprotein domain JJJ15_10050 PF07728 AAA domain (dynein-related subfamily) JJJ15_10065 PF05762 VWA domain containing CoxE-like protein JJJ15_10085 PF13569 Domain of unknown function (DUF4132) JJJ15_10090 PF13569 Domain of unknown function (DUF4132) JJJ15_10110 PF00133 tRNA synthetases class I (I, L, M and V) JJJ15_10110 PF08264 Anticodon-binding domain of tRNA JJJ15_10115 PF10698 Protein of unknown function (DUF2505) JJJ15_10120 PF07568 Histidine kinase JJJ15_10120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_10120 PF12282 Signal transduction histidine kinase JJJ15_10125 PF02467 Transcription factor WhiB JJJ15_10130 PF01580 FtsK/SpoIIIE family JJJ15_10140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JJJ15_10140 PF03120 NAD-dependent DNA ligase OB-fold domain JJJ15_10140 PF01653 NAD-dependent DNA ligase adenylation domain JJJ15_10140 PF00533 BRCA1 C Terminus (BRCT) domain JJJ15_10140 PF12826 Helix-hairpin-helix motif JJJ15_10160 PF01571 Aminomethyltransferase folate-binding domain JJJ15_10170 PF02580 D-Tyr-tRNA(Tyr) deacylase JJJ15_10185 PF03551 Transcriptional regulator PadR-like family JJJ15_10195 PF10431 C-terminal, D2-small domain, of ClpB protein JJJ15_10195 PF02861 Clp amino terminal domain, pathogenicity island component JJJ15_10195 PF17871 AAA lid domain JJJ15_10195 PF07724 AAA domain (Cdc48 subfamily) JJJ15_10195 PF00004 ATPase family associated with various cellular activities (AAA) JJJ15_10225 PF08271 TFIIB zinc-binding JJJ15_10235 PF00391 PEP-utilising enzyme, mobile domain JJJ15_10235 PF02896 PEP-utilising enzyme, TIM barrel domain JJJ15_10235 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JJJ15_10245 PF17863 AAA lid domain JJJ15_10245 PF07726 ATPase family associated with various cellular activities (AAA) JJJ15_10260 PF13191 AAA ATPase domain JJJ15_10260 PF00069 Protein kinase domain JJJ15_10265 PF00082 Subtilase family JJJ15_10270 PF05108 Type VII secretion system ESX-1, transport TM domain B JJJ15_10275 PF08817 WXG100 protein secretion system (Wss), protein YukD JJJ15_10305 PF01580 FtsK/SpoIIIE family JJJ15_10330 PF06259 Alpha/beta hydrolase JJJ15_10355 PF00075 RNase H JJJ15_10360 PF00072 Response regulator receiver domain JJJ15_10360 PF00196 Bacterial regulatory proteins, luxR family JJJ15_10365 PF07730 Histidine kinase JJJ15_10380 PF00005 ABC transporter JJJ15_10385 PF00871 Acetokinase family JJJ15_10390 PF07085 DRTGG domain JJJ15_10390 PF01515 Phosphate acetyl/butaryl transferase JJJ15_10405 PF00356 Bacterial regulatory proteins, lacI family JJJ15_10410 PF00083 Sugar (and other) transporter JJJ15_10415 PF00958 GMP synthase C terminal domain JJJ15_10415 PF00117 Glutamine amidotransferase class-I JJJ15_10415 PF02540 NAD synthase JJJ15_10425 PF04229 GrpB protein JJJ15_10450 PF00005 ABC transporter JJJ15_10455 PF07730 Histidine kinase JJJ15_10460 PF00196 Bacterial regulatory proteins, luxR family JJJ15_10460 PF00072 Response regulator receiver domain JJJ15_10470 PF00248 Aldo/keto reductase family JJJ15_10485 PF00248 Aldo/keto reductase family JJJ15_10490 PF01381 Helix-turn-helix JJJ15_10495 PF07690 Major Facilitator Superfamily JJJ15_10500 PF06772 Bacterial low temperature requirement A protein (LtrA) JJJ15_10505 PF10127 RNA repair pathway DNA polymerase beta family JJJ15_10530 PF06445 GyrI-like small molecule binding domain JJJ15_10530 PF13411 MerR HTH family regulatory protein JJJ15_10540 PF00437 Type II/IV secretion system protein JJJ15_10580 PF03466 LysR substrate binding domain JJJ15_10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJJ15_10585 PF00472 RF-1 domain JJJ15_10585 PF03462 PCRF domain JJJ15_10595 PF00005 ABC transporter JJJ15_10595 PF12848 ABC transporter JJJ15_10610 PF00005 ABC transporter JJJ15_10610 PF12704 MacB-like periplasmic core domain JJJ15_10610 PF02687 FtsX-like permease family JJJ15_10615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJJ15_10615 PF13493 Domain of unknown function (DUF4118) JJJ15_10615 PF02702 Osmosensitive K+ channel His kinase sensor domain JJJ15_10615 PF13492 GAF domain JJJ15_10615 PF00512 His Kinase A (phospho-acceptor) domain JJJ15_10620 PF00486 Transcriptional regulatory protein, C terminal JJJ15_10620 PF00072 Response regulator receiver domain JJJ15_10635 PF02896 PEP-utilising enzyme, TIM barrel domain JJJ15_10635 PF05524 PEP-utilising enzyme, N-terminal JJJ15_10635 PF00391 PEP-utilising enzyme, mobile domain JJJ15_10640 PF00367 phosphotransferase system, EIIB JJJ15_10645 PF02446 4-alpha-glucanotransferase JJJ15_10650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JJJ15_10655 PF00367 phosphotransferase system, EIIB JJJ15_10660 PF00367 phosphotransferase system, EIIB JJJ15_10665 PF00392 Bacterial regulatory proteins, gntR family JJJ15_10665 PF07702 UTRA domain JJJ15_10670 PF02378 Phosphotransferase system, EIIC JJJ15_10675 PF01433 Peptidase family M1 domain JJJ15_10675 PF11838 ERAP1-like C-terminal domain JJJ15_10695 PF00005 ABC transporter JJJ15_10705 PF05649 Peptidase family M13 JJJ15_10705 PF01431 Peptidase family M13 JJJ15_10710 PF02502 Ribose/Galactose Isomerase JJJ15_10715 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JJJ15_10715 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JJJ15_10715 PF06827 Zinc finger found in FPG and IleRS JJJ15_10725 PF00561 alpha/beta hydrolase fold JJJ15_10730 PF00132 Bacterial transferase hexapeptide (six repeats) JJJ15_10735 PF00291 Pyridoxal-phosphate dependent enzyme JJJ15_10740 PF01205 Uncharacterized protein family UPF0029 JJJ15_10740 PF09186 Domain of unknown function (DUF1949) JJJ15_10745 PF01783 Ribosomal L32p protein family JJJ15_10765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJJ15_10765 PF05698 Bacterial trigger factor protein (TF) C-terminus JJJ15_10765 PF05697 Bacterial trigger factor protein (TF) JJJ15_10785 PF00005 ABC transporter JJJ15_10790 PF00398 Ribosomal RNA adenine dimethylase JJJ15_10795 PF00574 Clp protease JJJ15_10800 PF00574 Clp protease JJJ15_10805 PF06689 ClpX C4-type zinc finger JJJ15_10805 PF10431 C-terminal, D2-small domain, of ClpB protein JJJ15_10805 PF07724 AAA domain (Cdc48 subfamily) JJJ15_10810 PF02153 Prephenate dehydrogenase JJJ15_10810 PF01817 Chorismate mutase type II JJJ15_10815 PF00501 AMP-binding enzyme JJJ15_10820 PF00501 AMP-binding enzyme JJJ15_10830 PF00133 tRNA synthetases class I (I, L, M and V) JJJ15_10830 PF08264 Anticodon-binding domain of tRNA JJJ15_10845 PF00005 ABC transporter JJJ15_10855 PF00005 ABC transporter JJJ15_10860 PF04954 Siderophore-interacting protein JJJ15_10860 PF08021 Siderophore-interacting FAD-binding domain JJJ15_10860 PF00664 ABC transporter transmembrane region JJJ15_10860 PF00005 ABC transporter JJJ15_10865 PF00005 ABC transporter JJJ15_10870 PF14748 Pyrroline-5-carboxylate reductase dimerisation JJJ15_10870 PF03807 NADP oxidoreductase coenzyme F420-dependent JJJ15_10875 PF00128 Alpha amylase, catalytic domain JJJ15_10875 PF16657 Maltogenic Amylase, C-terminal domain JJJ15_10880 PF02378 Phosphotransferase system, EIIC JJJ15_10880 PF00367 phosphotransferase system, EIIB JJJ15_10880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JJJ15_10885 PF00392 Bacterial regulatory proteins, gntR family JJJ15_10885 PF07702 UTRA domain JJJ15_10900 PF02686 Glu-tRNAGln amidotransferase C subunit JJJ15_10905 PF01425 Amidase JJJ15_10910 PF02637 GatB domain JJJ15_10910 PF02934 GatB/GatE catalytic domain JJJ15_10915 PF01551 Peptidase family M23 JJJ15_10920 PF00318 Ribosomal protein S2 JJJ15_10925 PF00889 Elongation factor TS JJJ15_10935 PF00474 Sodium:solute symporter family JJJ15_10940 PF00696 Amino acid kinase family JJJ15_10945 PF01765 Ribosome recycling factor JJJ15_10955 PF04055 Radical SAM superfamily JJJ15_10965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JJJ15_10965 PF13288 DXP reductoisomerase C-terminal domain JJJ15_10965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JJJ15_10970 PF02163 Peptidase family M50 JJJ15_10970 PF17820 PDZ domain JJJ15_10985 PF00860 Permease family JJJ15_10995 PF07859 alpha/beta hydrolase fold JJJ15_11000 PF07702 UTRA domain JJJ15_11000 PF00392 Bacterial regulatory proteins, gntR family JJJ15_11005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJJ15_11010 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJJ15_11015 PF00005 ABC transporter JJJ15_11020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJJ15_11020 PF00005 ABC transporter JJJ15_11025 PF00701 Dihydrodipicolinate synthetase family JJJ15_11030 PF00480 ROK family JJJ15_11035 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JJJ15_11040 PF00216 Bacterial DNA-binding protein JJJ15_11045 PF00005 ABC transporter JJJ15_11045 PF13732 Domain of unknown function (DUF4162) JJJ15_11055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JJJ15_11065 PF04851 Type III restriction enzyme, res subunit JJJ15_11070 PF00561 alpha/beta hydrolase fold JJJ15_11070 PF00364 Biotin-requiring enzyme JJJ15_11075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JJJ15_11075 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JJJ15_11080 PF02617 ATP-dependent Clp protease adaptor protein ClpS JJJ15_11095 PF12706 Beta-lactamase superfamily domain JJJ15_11110 PF01725 Ham1 family JJJ15_11115 PF03725 3' exoribonuclease family, domain 2 JJJ15_11115 PF01138 3' exoribonuclease family, domain 1 JJJ15_11120 PF03992 Antibiotic biosynthesis monooxygenase JJJ15_11155 PF00561 alpha/beta hydrolase fold JJJ15_11165 PF03733 Inner membrane component domain JJJ15_11170 PF00583 Acetyltransferase (GNAT) family JJJ15_11175 PF03193 RsgA GTPase JJJ15_11180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JJJ15_11185 PF03971 Monomeric isocitrate dehydrogenase JJJ15_11195 PF05731 TROVE domain JJJ15_11205 PF04542 Sigma-70 region 2 JJJ15_11205 PF08281 Sigma-70, region 4 JJJ15_11220 PF03932 CutC family JJJ15_11230 PF16870 2-oxoglutarate dehydrogenase C-terminal JJJ15_11230 PF02779 Transketolase, pyrimidine binding domain JJJ15_11230 PF00676 Dehydrogenase E1 component JJJ15_11230 PF16078 2-oxoglutarate dehydrogenase N-terminus JJJ15_11230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJJ15_11235 PF00571 CBS domain JJJ15_11235 PF03471 Transporter associated domain JJJ15_11235 PF01595 Cyclin M transmembrane N-terminal domain JJJ15_11240 PF00571 CBS domain JJJ15_11240 PF01595 Cyclin M transmembrane N-terminal domain JJJ15_11245 PF08460 Bacterial SH3 domain JJJ15_11245 PF01551 Peptidase family M23 JJJ15_11255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJJ15_11255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJJ15_11255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJJ15_11255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJJ15_11260 PF00005 ABC transporter JJJ15_11265 PF01032 FecCD transport family JJJ15_11270 PF01032 FecCD transport family JJJ15_11275 PF01497 Periplasmic binding protein JJJ15_11280 PF00483 Nucleotidyl transferase JJJ15_11285 PF00288 GHMP kinases N terminal domain JJJ15_11285 PF08544 GHMP kinases C terminal JJJ15_11285 PF10509 Galactokinase galactose-binding signature JJJ15_11305 PF03485 Arginyl tRNA synthetase N terminal domain JJJ15_11305 PF05746 DALR anticodon binding domain JJJ15_11305 PF00750 tRNA synthetases class I (R) JJJ15_11310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJJ15_11310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JJJ15_11330 PF01842 ACT domain JJJ15_11330 PF00742 Homoserine dehydrogenase JJJ15_11330 PF03447 Homoserine dehydrogenase, NAD binding domain JJJ15_11335 PF00288 GHMP kinases N terminal domain JJJ15_11340 PF07497 Rho termination factor, RNA-binding domain JJJ15_11340 PF07498 Rho termination factor, N-terminal domain JJJ15_11340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJJ15_11350 PF01197 Ribosomal protein L31 JJJ15_11355 PF03462 PCRF domain JJJ15_11355 PF00472 RF-1 domain JJJ15_11360 PF17827 PrmC N-terminal domain JJJ15_11360 PF05175 Methyltransferase small domain JJJ15_11365 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JJJ15_11370 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JJJ15_11405 PF13361 UvrD-like helicase C-terminal domain JJJ15_11405 PF00580 UvrD/REP helicase N-terminal domain JJJ15_11425 PF10099 Anti-sigma-K factor rskA JJJ15_11430 PF04545 Sigma-70, region 4 JJJ15_11430 PF04542 Sigma-70 region 2 JJJ15_11435 PF00578 AhpC/TSA family JJJ15_11435 PF17991 Thioredoxin like C-terminal domain JJJ15_11435 PF02683 Cytochrome C biogenesis protein transmembrane region JJJ15_11455 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_11460 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_11465 PF00128 Alpha amylase, catalytic domain JJJ15_11470 PF01070 FMN-dependent dehydrogenase JJJ15_11475 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JJJ15_11475 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JJJ15_11490 PF00365 Phosphofructokinase JJJ15_11570 PF00437 Type II/IV secretion system protein JJJ15_11610 PF12538 DNA transporter JJJ15_11610 PF01580 FtsK/SpoIIIE family JJJ15_11615 PF00549 CoA-ligase JJJ15_11615 PF08442 ATP-grasp domain JJJ15_11620 PF00549 CoA-ligase JJJ15_11620 PF02629 CoA binding domain JJJ15_11630 PF01808 AICARFT/IMPCHase bienzyme JJJ15_11630 PF02142 MGS-like domain JJJ15_11650 PF00561 alpha/beta hydrolase fold JJJ15_11660 PF00664 ABC transporter transmembrane region JJJ15_11660 PF00005 ABC transporter JJJ15_11665 PF00005 ABC transporter JJJ15_11670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JJJ15_11670 PF00056 lactate/malate dehydrogenase, NAD binding domain JJJ15_11680 PF00392 Bacterial regulatory proteins, gntR family JJJ15_11700 PF00085 Thioredoxin JJJ15_11705 PF00343 Carbohydrate phosphorylase JJJ15_11715 PF04551 GcpE protein JJJ15_11735 PF01070 FMN-dependent dehydrogenase JJJ15_11740 PF00288 GHMP kinases N terminal domain JJJ15_11740 PF08544 GHMP kinases C terminal JJJ15_11750 PF08544 GHMP kinases C terminal JJJ15_11750 PF00288 GHMP kinases N terminal domain JJJ15_11750 PF10509 Galactokinase galactose-binding signature JJJ15_11770 PF00196 Bacterial regulatory proteins, luxR family JJJ15_11770 PF00072 Response regulator receiver domain JJJ15_11780 PF00005 ABC transporter JJJ15_11810 PF03129 Anticodon binding domain JJJ15_11810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJJ15_11810 PF04073 Aminoacyl-tRNA editing domain JJJ15_11825 PF17384 RimP C-terminal SH3 domain JJJ15_11825 PF02576 RimP N-terminal domain JJJ15_11830 PF08529 NusA N-terminal domain JJJ15_11830 PF13184 NusA-like KH domain JJJ15_11840 PF04760 Translation initiation factor IF-2, N-terminal region JJJ15_11840 PF04760 Translation initiation factor IF-2, N-terminal region JJJ15_11840 PF00009 Elongation factor Tu GTP binding domain JJJ15_11840 PF11987 Translation-initiation factor 2 JJJ15_11840 PF11987 Translation-initiation factor 2 JJJ15_11840 PF00009 Elongation factor Tu GTP binding domain JJJ15_11850 PF01066 CDP-alcohol phosphatidyltransferase JJJ15_11855 PF18146 Damage-inducible protein CinA KH domain JJJ15_11855 PF02464 Competence-damaged protein JJJ15_11855 PF00994 Probable molybdopterin binding domain JJJ15_11870 PF00154 recA bacterial DNA recombination protein JJJ15_11885 PF01268 Formate--tetrahydrofolate ligase JJJ15_11890 PF02502 Ribose/Galactose Isomerase JJJ15_11895 PF02687 FtsX-like permease family JJJ15_11895 PF00005 ABC transporter JJJ15_11895 PF12704 MacB-like periplasmic core domain JJJ15_11905 PF00440 Bacterial regulatory proteins, tetR family JJJ15_11905 PF16859 Tetracyclin repressor-like, C-terminal domain JJJ15_11910 PF02525 Flavodoxin-like fold JJJ15_11915 PF01597 Glycine cleavage H-protein JJJ15_11920 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJJ15_11920 PF01571 Aminomethyltransferase folate-binding domain JJJ15_11925 PF02347 Glycine cleavage system P-protein JJJ15_11935 PF16874 Glycosyl hydrolase family 36 C-terminal domain JJJ15_11935 PF16875 Glycosyl hydrolase family 36 N-terminal domain JJJ15_11950 PF04055 Radical SAM superfamily JJJ15_11950 PF00919 Uncharacterized protein family UPF0004 JJJ15_11955 PF00857 Isochorismatase family JJJ15_11965 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJJ15_11965 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJJ15_11975 PF03239 Iron permease FTR1 family JJJ15_11995 PF02687 FtsX-like permease family JJJ15_11995 PF12704 MacB-like periplasmic core domain JJJ15_12000 PF12704 MacB-like periplasmic core domain JJJ15_12000 PF02687 FtsX-like permease family JJJ15_12000 PF00005 ABC transporter JJJ15_12025 PF01678 Diaminopimelate epimerase JJJ15_12030 PF05525 Branched-chain amino acid transport protein JJJ15_12035 PF07690 Major Facilitator Superfamily JJJ15_12045 PF05175 Methyltransferase small domain JJJ15_12080 PF00701 Dihydrodipicolinate synthetase family JJJ15_12090 PF13193 AMP-binding enzyme C-terminal domain JJJ15_12090 PF00501 AMP-binding enzyme JJJ15_12095 PF13193 AMP-binding enzyme C-terminal domain JJJ15_12095 PF00501 AMP-binding enzyme JJJ15_12115 PF00817 impB/mucB/samB family JJJ15_12115 PF11799 impB/mucB/samB family C-terminal domain JJJ15_12120 PF02308 MgtC family JJJ15_12130 PF02381 MraZ protein, putative antitoxin-like JJJ15_12135 PF01795 MraW methylase family JJJ15_12145 PF00905 Penicillin binding protein transpeptidase domain JJJ15_12145 PF03717 Penicillin-binding Protein dimerisation domain JJJ15_12150 PF08245 Mur ligase middle domain JJJ15_12150 PF02875 Mur ligase family, glutamate ligase domain JJJ15_12150 PF01225 Mur ligase family, catalytic domain JJJ15_12155 PF08245 Mur ligase middle domain JJJ15_12155 PF02875 Mur ligase family, glutamate ligase domain JJJ15_12155 PF01225 Mur ligase family, catalytic domain JJJ15_12160 PF00953 Glycosyl transferase family 4 JJJ15_12160 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JJJ15_12165 PF02875 Mur ligase family, glutamate ligase domain JJJ15_12165 PF08245 Mur ligase middle domain JJJ15_12170 PF01098 Cell cycle protein JJJ15_12175 PF03033 Glycosyltransferase family 28 N-terminal domain JJJ15_12175 PF04101 Glycosyltransferase family 28 C-terminal domain JJJ15_12180 PF08245 Mur ligase middle domain JJJ15_12180 PF02875 Mur ligase family, glutamate ligase domain JJJ15_12180 PF01225 Mur ligase family, catalytic domain JJJ15_12190 PF00091 Tubulin/FtsZ family, GTPase domain JJJ15_12190 PF12327 FtsZ family, C-terminal domain JJJ15_12195 PF02578 Multi-copper polyphenol oxidoreductase laccase JJJ15_12200 PF04472 Cell division protein SepF JJJ15_12210 PF05103 DivIVA protein JJJ15_12215 PF01252 Signal peptidase (SPase) II JJJ15_12220 PF00849 RNA pseudouridylate synthase JJJ15_12225 PF13673 Acetyltransferase (GNAT) domain JJJ15_12230 PF02811 PHP domain JJJ15_12230 PF14579 Helix-hairpin-helix motif JJJ15_12230 PF07733 Bacterial DNA polymerase III alpha NTPase domain JJJ15_12230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JJJ15_12265 PF00171 Aldehyde dehydrogenase family JJJ15_12270 PF00106 short chain dehydrogenase JJJ15_12280 PF00815 Histidinol dehydrogenase JJJ15_12320 PF18337 RapA N-terminal Tudor like domain JJJ15_12320 PF18339 RapA N-terminal Tudor like domain 1 JJJ15_12320 PF00176 SNF2 family N-terminal domain JJJ15_12320 PF12137 RNA polymerase recycling family C-terminal JJJ15_12320 PF00271 Helicase conserved C-terminal domain JJJ15_12325 PF07669 Eco57I restriction-modification methylase JJJ15_12345 PF02481 DNA recombination-mediator protein A JJJ15_12345 PF17782 DprA winged helix domain JJJ15_12360 PF00999 Sodium/hydrogen exchanger family JJJ15_12365 PF04055 Radical SAM superfamily JJJ15_12370 PF01871 AMMECR1 JJJ15_12375 PF01875 Memo-like protein JJJ15_12380 PF00155 Aminotransferase class I and II JJJ15_12385 PF00475 Imidazoleglycerol-phosphate dehydratase JJJ15_12395 PF13191 AAA ATPase domain JJJ15_12395 PF00069 Protein kinase domain JJJ15_12400 PF00117 Glutamine amidotransferase class-I JJJ15_12405 PF00977 Histidine biosynthesis protein JJJ15_12420 PF00005 ABC transporter JJJ15_12430 PF00707 Translation initiation factor IF-3, C-terminal domain JJJ15_12430 PF05198 Translation initiation factor IF-3, N-terminal domain JJJ15_12435 PF01632 Ribosomal protein L35 JJJ15_12440 PF00453 Ribosomal protein L20 JJJ15_12445 PF00005 ABC transporter JJJ15_12450 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJJ15_12455 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_12460 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_12465 PF08032 RNA 2'-O ribose methyltransferase substrate binding JJJ15_12465 PF00588 SpoU rRNA Methylase family JJJ15_12480 PF00005 ABC transporter JJJ15_12480 PF13732 Domain of unknown function (DUF4162) JJJ15_12490 PF01409 tRNA synthetases class II core domain (F) JJJ15_12490 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JJJ15_12495 PF03483 B3/4 domain JJJ15_12495 PF03484 tRNA synthetase B5 domain JJJ15_12495 PF01588 Putative tRNA binding domain JJJ15_12495 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JJJ15_12495 PF03147 Ferredoxin-fold anticodon binding domain JJJ15_12515 PF01960 ArgJ family JJJ15_12520 PF00696 Amino acid kinase family JJJ15_12525 PF00202 Aminotransferase class-III JJJ15_12530 PF01316 Arginine repressor, DNA binding domain JJJ15_12530 PF02863 Arginine repressor, C-terminal domain JJJ15_12535 PF00764 Arginosuccinate synthase JJJ15_12555 PF14698 Argininosuccinate lyase C-terminal JJJ15_12555 PF00206 Lyase JJJ15_12560 PF02245 Methylpurine-DNA glycosylase (MPG) JJJ15_12565 PF08241 Methyltransferase domain JJJ15_12575 PF00579 tRNA synthetases class I (W and Y) JJJ15_12610 PF01479 S4 domain JJJ15_12610 PF01728 FtsJ-like methyltransferase JJJ15_12615 PF01513 ATP-NAD kinase JJJ15_12620 PF02463 RecF/RecN/SMC N terminal domain JJJ15_12630 PF11382 Copper transport outer membrane protein, MctB JJJ15_12650 PF06418 CTP synthase N-terminus JJJ15_12650 PF00117 Glutamine amidotransferase class-I JJJ15_12655 PF00293 NUDIX domain JJJ15_12665 PF01458 Uncharacterized protein family (UPF0051) JJJ15_12670 PF01458 Uncharacterized protein family (UPF0051) JJJ15_12675 PF00005 ABC transporter JJJ15_12680 PF00266 Aminotransferase class-V JJJ15_12685 PF01592 NifU-like N terminal domain JJJ15_12690 PF01883 Iron-sulfur cluster assembly protein JJJ15_12695 PF04343 Protein of unknown function, DUF488 JJJ15_12715 PF01180 Dihydroorotate dehydrogenase JJJ15_12720 PF00248 Aldo/keto reductase family JJJ15_12725 PF11241 Protein of unknown function (DUF3043) JJJ15_12740 PF00356 Bacterial regulatory proteins, lacI family JJJ15_12745 PF00128 Alpha amylase, catalytic domain JJJ15_12745 PF02903 Alpha amylase, N-terminal ig-like domain JJJ15_12750 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_12755 PF00528 Binding-protein-dependent transport system inner membrane component JJJ15_12755 PF14785 Maltose transport system permease protein MalF P2 domain JJJ15_12760 PF13416 Bacterial extracellular solute-binding protein JJJ15_12770 PF13286 Phosphohydrolase-associated domain JJJ15_12770 PF01966 HD domain