locus-tag class description AM609_00015 PF02687 FtsX-like permease family AM609_00015 PF12704 MacB-like periplasmic core domain AM609_00015 PF00005 ABC transporter AM609_00020 PF01471 Putative peptidoglycan binding domain AM609_00020 PF08924 Domain of unknown function (DUF1906) AM609_00050 PF13419 Haloacid dehalogenase-like hydrolase AM609_00065 PF03613 PTS system mannose/fructose/sorbose family IID component AM609_00070 PF03609 PTS system sorbose-specific iic component AM609_00075 PF03830 PTS system sorbose subfamily IIB component AM609_00075 PF03610 PTS system fructose IIA component AM609_00080 PF03610 PTS system fructose IIA component AM609_00095 PF00392 Bacterial regulatory proteins, gntR family AM609_00100 PF00005 ABC transporter AM609_00120 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM609_00145 PF00664 ABC transporter transmembrane region AM609_00145 PF00005 ABC transporter AM609_00165 PF00480 ROK family AM609_00180 PF13396 Phospholipase_D-nuclease N-terminal AM609_00180 PF13091 PLD-like domain AM609_00200 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM609_00200 PF11898 Domain of unknown function (DUF3418) AM609_00200 PF04408 Helicase associated domain (HA2) AM609_00200 PF00271 Helicase conserved C-terminal domain AM609_00200 PF00270 DEAD/DEAH box helicase AM609_00225 PF00294 pfkB family carbohydrate kinase AM609_00250 PF02219 Methylenetetrahydrofolate reductase AM609_00255 PF01717 Cobalamin-independent synthase, Catalytic domain AM609_00255 PF08267 Cobalamin-independent synthase, N-terminal domain AM609_00260 PF03932 CutC family AM609_00270 PF00664 ABC transporter transmembrane region AM609_00270 PF00005 ABC transporter AM609_00275 PF00005 ABC transporter AM609_00275 PF00664 ABC transporter transmembrane region AM609_00290 PF07728 AAA domain (dynein-related subfamily) AM609_00305 PF16916 Dimerisation domain of Zinc Transporter AM609_00305 PF01545 Cation efflux family AM609_00335 PF03458 UPF0126 domain AM609_00345 PF09234 Domain of unknown function (DUF1963) AM609_00390 PF00999 Sodium/hydrogen exchanger family AM609_00390 PF02254 TrkA-N domain AM609_00395 PF00271 Helicase conserved C-terminal domain AM609_00395 PF00176 SNF2 family N-terminal domain AM609_00395 PF12419 SNF2 Helicase protein AM609_00445 PF02861 Clp amino terminal domain, pathogenicity island component AM609_00445 PF10431 C-terminal, D2-small domain, of ClpB protein AM609_00445 PF17871 AAA lid domain AM609_00445 PF00004 ATPase family associated with various cellular activities (AAA) AM609_00445 PF07724 AAA domain (Cdc48 subfamily) AM609_00475 PF03793 PASTA domain AM609_00475 PF00069 Protein kinase domain AM609_00510 PF00012 Hsp70 protein AM609_00695 PF00005 ABC transporter AM609_00695 PF08402 TOBE domain AM609_00725 PF00528 Binding-protein-dependent transport system inner membrane component AM609_00730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM609_00735 PF00005 ABC transporter AM609_00735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM609_00765 PF05731 TROVE domain AM609_00785 PF13086 AAA domain AM609_00785 PF13086 AAA domain AM609_00785 PF13195 Protein of unknown function (DUF4011) AM609_00785 PF13087 AAA domain AM609_00785 PF13087 AAA domain AM609_00785 PF13195 Protein of unknown function (DUF4011) AM609_00790 PF13086 AAA domain AM609_00790 PF13087 AAA domain AM609_00790 PF13195 Protein of unknown function (DUF4011) AM609_00790 PF13086 AAA domain AM609_00790 PF13087 AAA domain AM609_00790 PF13195 Protein of unknown function (DUF4011) AM609_00805 PF07726 ATPase family associated with various cellular activities (AAA) AM609_00805 PF17863 AAA lid domain AM609_00840 PF00293 NUDIX domain AM609_00870 PF00692 dUTPase AM609_00880 PF11490 DNA polymerase III polC-type N-terminus II AM609_00880 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM609_00880 PF00929 Exonuclease AM609_00880 PF02811 PHP domain AM609_00880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM609_00880 PF14579 Helix-hairpin-helix motif AM609_00885 PF00881 Nitroreductase family AM609_00900 PF00106 short chain dehydrogenase AM609_00905 PF08534 Redoxin AM609_00910 PF00156 Phosphoribosyl transferase domain AM609_00935 PF00011 Hsp20/alpha crystallin family AM609_00940 PF01116 Fructose-bisphosphate aldolase class-II AM609_00950 PF00528 Binding-protein-dependent transport system inner membrane component AM609_00955 PF00528 Binding-protein-dependent transport system inner membrane component AM609_00975 PF13340 Putative transposase of IS4/5 family (DUF4096) AM609_00980 PF00135 Carboxylesterase family AM609_00990 PF00709 Adenylosuccinate synthetase AM609_01030 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AM609_01030 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AM609_01035 PF08240 Alcohol dehydrogenase GroES-like domain AM609_01035 PF00107 Zinc-binding dehydrogenase AM609_01040 PF01850 PIN domain AM609_01045 PF09957 Bacterial antitoxin of type II TA system, VapB AM609_01065 PF02843 Phosphoribosylglycinamide synthetase, C domain AM609_01065 PF02844 Phosphoribosylglycinamide synthetase, N domain AM609_01065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM609_01070 PF01259 SAICAR synthetase AM609_01095 PF00586 AIR synthase related protein, N-terminal domain AM609_01095 PF02769 AIR synthase related protein, C-terminal domain AM609_01095 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM609_01110 PF00440 Bacterial regulatory proteins, tetR family AM609_01110 PF13977 BetI-type transcriptional repressor, C-terminal AM609_01120 PF00128 Alpha amylase, catalytic domain AM609_01120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM609_01140 PF13419 Haloacid dehalogenase-like hydrolase AM609_01165 PF01066 CDP-alcohol phosphatidyltransferase AM609_01185 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM609_01185 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM609_01195 PF00455 DeoR C terminal sensor domain AM609_01195 PF08220 DeoR-like helix-turn-helix domain AM609_01200 PF00294 pfkB family carbohydrate kinase AM609_01215 PF00156 Phosphoribosyl transferase domain AM609_01220 PF00586 AIR synthase related protein, N-terminal domain AM609_01220 PF02769 AIR synthase related protein, C-terminal domain AM609_01255 PF01209 ubiE/COQ5 methyltransferase family AM609_01260 PF02261 Aspartate decarboxylase AM609_01265 PF02569 Pantoate-beta-alanine ligase AM609_01295 PF00809 Pterin binding enzyme AM609_01300 PF00664 ABC transporter transmembrane region AM609_01300 PF00005 ABC transporter AM609_01310 PF01032 FecCD transport family AM609_01320 PF00005 ABC transporter AM609_01330 PF02687 FtsX-like permease family AM609_01330 PF12704 MacB-like periplasmic core domain AM609_01330 PF00005 ABC transporter AM609_01335 PF00196 Bacterial regulatory proteins, luxR family AM609_01335 PF00072 Response regulator receiver domain AM609_01355 PF01336 OB-fold nucleic acid binding domain AM609_01355 PF00152 tRNA synthetases class II (D, K and N) AM609_01375 PF01070 FMN-dependent dehydrogenase AM609_01385 PF00005 ABC transporter AM609_01405 PF01232 Mannitol dehydrogenase Rossmann domain AM609_01405 PF08125 Mannitol dehydrogenase C-terminal domain AM609_01410 PF02589 LUD domain AM609_01415 PF02589 LUD domain AM609_01415 PF13183 4Fe-4S dicluster domain AM609_01415 PF11870 Domain of unknown function (DUF3390) AM609_01420 PF02754 Cysteine-rich domain AM609_01450 PF13191 AAA ATPase domain AM609_01450 PF00069 Protein kinase domain AM609_01470 PF17863 AAA lid domain AM609_01470 PF07726 ATPase family associated with various cellular activities (AAA) AM609_01480 PF01467 Cytidylyltransferase-like AM609_01480 PF00294 pfkB family carbohydrate kinase AM609_01485 PF02397 Bacterial sugar transferase AM609_01545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM609_01545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM609_01550 PF01266 FAD dependent oxidoreductase AM609_01550 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM609_01560 PF00583 Acetyltransferase (GNAT) family AM609_01565 PF00730 HhH-GPD superfamily base excision DNA repair protein AM609_01565 PF00633 Helix-hairpin-helix motif AM609_01575 PF12826 Helix-hairpin-helix motif AM609_01575 PF10635 DisA bacterial checkpoint controller linker region AM609_01575 PF02457 DisA bacterial checkpoint controller nucleotide-binding AM609_01580 PF06745 KaiC AM609_01580 PF18073 Rubredoxin metal binding domain AM609_01590 PF00456 Transketolase, thiamine diphosphate binding domain AM609_01590 PF02779 Transketolase, pyrimidine binding domain AM609_01590 PF02780 Transketolase, C-terminal domain AM609_01610 PF00480 ROK family AM609_01620 PF00135 Carboxylesterase family AM609_01655 PF08281 Sigma-70, region 4 AM609_01655 PF04542 Sigma-70 region 2 AM609_01660 PF01263 Aldose 1-epimerase AM609_01685 PF02929 Beta galactosidase small chain AM609_01685 PF16353 Domain of unknown function(DUF4981) AM609_01685 PF00703 Glycosyl hydrolases family 2 AM609_01685 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM609_01685 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM609_01700 PF02386 Cation transport protein AM609_01705 PF12728 Helix-turn-helix domain AM609_01710 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM609_01710 PF01565 FAD binding domain AM609_01715 PF00962 Adenosine/AMP deaminase AM609_01725 PF01235 Sodium:alanine symporter family AM609_01730 PF00155 Aminotransferase class I and II AM609_01760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM609_01765 PF02357 Transcription termination factor nusG AM609_01770 PF03946 Ribosomal protein L11, N-terminal domain AM609_01770 PF00298 Ribosomal protein L11, RNA binding domain AM609_01775 PF00687 Ribosomal protein L1p/L10e family AM609_01780 PF00069 Protein kinase domain AM609_01785 PF00691 OmpA family AM609_01795 PF00466 Ribosomal protein L10 AM609_01800 PF16320 Ribosomal protein L7/L12 dimerisation domain AM609_01800 PF00542 Ribosomal protein L7/L12 C-terminal domain AM609_01805 PF04560 RNA polymerase Rpb2, domain 7 AM609_01805 PF00562 RNA polymerase Rpb2, domain 6 AM609_01805 PF10385 RNA polymerase beta subunit external 1 domain AM609_01805 PF04565 RNA polymerase Rpb2, domain 3 AM609_01805 PF04561 RNA polymerase Rpb2, domain 2 AM609_01805 PF04563 RNA polymerase beta subunit AM609_01810 PF00623 RNA polymerase Rpb1, domain 2 AM609_01810 PF04997 RNA polymerase Rpb1, domain 1 AM609_01810 PF04983 RNA polymerase Rpb1, domain 3 AM609_01810 PF05000 RNA polymerase Rpb1, domain 4 AM609_01810 PF04998 RNA polymerase Rpb1, domain 5 AM609_01820 PF00012 Hsp70 protein AM609_01920 PF00164 Ribosomal protein S12/S23 AM609_01925 PF00177 Ribosomal protein S7p/S5e AM609_01930 PF03764 Elongation factor G, domain IV AM609_01930 PF14492 Elongation Factor G, domain II AM609_01930 PF00679 Elongation factor G C-terminus AM609_01930 PF03144 Elongation factor Tu domain 2 AM609_01930 PF00009 Elongation factor Tu GTP binding domain AM609_01935 PF03143 Elongation factor Tu C-terminal domain AM609_01935 PF03144 Elongation factor Tu domain 2 AM609_01935 PF00009 Elongation factor Tu GTP binding domain AM609_01945 PF00746 LPXTG cell wall anchor motif AM609_01945 PF16555 Gram-positive pilin subunit D1, N-terminal domain AM609_01955 PF00338 Ribosomal protein S10p/S20e AM609_01960 PF00297 Ribosomal protein L3 AM609_01965 PF00573 Ribosomal protein L4/L1 family AM609_01970 PF00276 Ribosomal protein L23 AM609_01975 PF00181 Ribosomal Proteins L2, RNA binding domain AM609_01975 PF03947 Ribosomal Proteins L2, C-terminal domain AM609_01980 PF00203 Ribosomal protein S19 AM609_01985 PF00237 Ribosomal protein L22p/L17e AM609_01990 PF00189 Ribosomal protein S3, C-terminal domain AM609_01990 PF07650 KH domain AM609_01995 PF00252 Ribosomal protein L16p/L10e AM609_02000 PF00831 Ribosomal L29 protein AM609_02005 PF00366 Ribosomal protein S17 AM609_02015 PF00238 Ribosomal protein L14p/L23e AM609_02020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM609_02025 PF00673 ribosomal L5P family C-terminus AM609_02025 PF00281 Ribosomal protein L5 AM609_02030 PF00253 Ribosomal protein S14p/S29e AM609_02035 PF00410 Ribosomal protein S8 AM609_02040 PF00347 Ribosomal protein L6 AM609_02045 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM609_02050 PF00333 Ribosomal protein S5, N-terminal domain AM609_02050 PF03719 Ribosomal protein S5, C-terminal domain AM609_02055 PF00327 Ribosomal protein L30p/L7e AM609_02060 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM609_02075 PF00344 SecY translocase AM609_02085 PF00557 Metallopeptidase family M24 AM609_02090 PF01176 Translation initiation factor 1A / IF-1 AM609_02095 PF00444 Ribosomal protein L36 AM609_02100 PF00416 Ribosomal protein S13/S18 AM609_02105 PF00411 Ribosomal protein S11 AM609_02110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM609_02110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM609_02110 PF01000 RNA polymerase Rpb3/RpoA insert domain AM609_02115 PF01196 Ribosomal protein L17 AM609_02130 PF01416 tRNA pseudouridine synthase AM609_02135 PF00572 Ribosomal protein L13 AM609_02140 PF00380 Ribosomal protein S9/S16 AM609_02145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM609_02145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM609_02145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM609_02145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM609_02155 PF01061 ABC-2 type transporter AM609_02160 PF00005 ABC transporter AM609_02160 PF13732 Domain of unknown function (DUF4162) AM609_02175 PF00485 Phosphoribulokinase / Uridine kinase family AM609_02180 PF01380 SIS domain AM609_02185 PF01648 4'-phosphopantetheinyl transferase superfamily AM609_02190 PF01256 Carbohydrate kinase AM609_02190 PF03853 YjeF-related protein N-terminus AM609_02195 PF01168 Alanine racemase, N-terminal domain AM609_02195 PF00842 Alanine racemase, C-terminal domain AM609_02200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM609_02205 PF00814 Glycoprotease family AM609_02220 PF02910 Fumarate reductase flavoprotein C-term AM609_02220 PF00890 FAD binding domain AM609_02225 PF13085 2Fe-2S iron-sulfur cluster binding domain AM609_02225 PF13183 4Fe-4S dicluster domain AM609_02230 PF00814 Glycoprotease family AM609_02235 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM609_02245 PF02698 DUF218 domain AM609_02250 PF00166 Chaperonin 10 Kd subunit AM609_02255 PF02467 Transcription factor WhiB AM609_02260 PF00571 CBS domain AM609_02260 PF00478 IMP dehydrogenase / GMP reductase domain AM609_02275 PF00478 IMP dehydrogenase / GMP reductase domain AM609_02280 PF00381 PTS HPr component phosphorylation site AM609_02285 PF01914 MarC family integral membrane protein AM609_02290 PF00075 RNase H AM609_02295 PF00871 Acetokinase family AM609_02300 PF01515 Phosphate acetyl/butaryl transferase AM609_02300 PF07085 DRTGG domain AM609_02305 PF00083 Sugar (and other) transporter AM609_02320 PF07729 FCD domain AM609_02320 PF00392 Bacterial regulatory proteins, gntR family AM609_02325 PF00117 Glutamine amidotransferase class-I AM609_02325 PF02540 NAD synthase AM609_02325 PF00958 GMP synthase C terminal domain AM609_02340 PF07859 alpha/beta hydrolase fold AM609_02345 PF00248 Aldo/keto reductase family AM609_02370 PF00005 ABC transporter AM609_02375 PF07730 Histidine kinase AM609_02380 PF00196 Bacterial regulatory proteins, luxR family AM609_02380 PF00072 Response regulator receiver domain AM609_02395 PF13784 Fic/DOC family N-terminal AM609_02395 PF02661 Fic/DOC family AM609_02405 PF00248 Aldo/keto reductase family AM609_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM609_02410 PF03466 LysR substrate binding domain AM609_02435 PF00005 ABC transporter AM609_02450 PF12833 Helix-turn-helix domain AM609_02450 PF02311 AraC-like ligand binding domain AM609_02475 PF02627 Carboxymuconolactone decarboxylase family AM609_02480 PF07690 Major Facilitator Superfamily AM609_02490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM609_02490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM609_02505 PF02653 Branched-chain amino acid transport system / permease component AM609_02510 PF00005 ABC transporter AM609_02515 PF00356 Bacterial regulatory proteins, lacI family AM609_02520 PF02525 Flavodoxin-like fold AM609_02535 PF09154 Domain of unknown function (DUF1939) AM609_02535 PF00128 Alpha amylase, catalytic domain AM609_02570 PF00072 Response regulator receiver domain AM609_02570 PF00196 Bacterial regulatory proteins, luxR family AM609_02575 PF01300 Telomere recombination AM609_02580 PF00953 Glycosyl transferase family 4 AM609_02590 PF00119 ATP synthase A chain AM609_02595 PF00137 ATP synthase subunit C AM609_02600 PF00430 ATP synthase B/B' CF(0) AM609_02605 PF00213 ATP synthase delta (OSCP) subunit AM609_02610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM609_02610 PF00306 ATP synthase alpha/beta chain, C terminal domain AM609_02610 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM609_02615 PF00231 ATP synthase AM609_02620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM609_02620 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM609_02625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM609_02640 PF01939 Endonuclease NucS AM609_02650 PF00005 ABC transporter AM609_02660 PF01979 Amidohydrolase family AM609_02720 PF00005 ABC transporter AM609_02725 PF00551 Formyl transferase AM609_02735 PF00872 Transposase, Mutator family AM609_02740 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AM609_02745 PF01867 CRISPR associated protein Cas1 AM609_02755 PF09704 CRISPR-associated protein (Cas_Cas5) AM609_02760 PF09344 CT1975-like protein AM609_02775 PF18395 Cas3 C-terminal domain AM609_02775 PF00270 DEAD/DEAH box helicase AM609_02775 PF18019 HD domain AM609_02780 PF00464 Serine hydroxymethyltransferase AM609_02785 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM609_02785 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM609_02790 PF00708 Acylphosphatase AM609_02800 PF00696 Amino acid kinase family AM609_02830 PF00005 ABC transporter AM609_02830 PF02687 FtsX-like permease family AM609_02830 PF12704 MacB-like periplasmic core domain AM609_02835 PF12704 MacB-like periplasmic core domain AM609_02835 PF02687 FtsX-like permease family AM609_02835 PF00005 ABC transporter AM609_02845 PF10509 Galactokinase galactose-binding signature AM609_02845 PF08544 GHMP kinases C terminal AM609_02845 PF00288 GHMP kinases N terminal domain AM609_02860 PF00483 Nucleotidyl transferase AM609_02860 PF01050 Mannose-6-phosphate isomerase AM609_02885 PF02885 Glycosyl transferase family, helical bundle domain AM609_02885 PF00591 Glycosyl transferase family, a/b domain AM609_02885 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM609_02895 PF01791 DeoC/LacD family aldolase AM609_02900 PF01297 Zinc-uptake complex component A periplasmic AM609_02905 PF00005 ABC transporter AM609_02910 PF00950 ABC 3 transport family AM609_02920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM609_02920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM609_02920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM609_02920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM609_02930 PF01546 Peptidase family M20/M25/M40 AM609_02930 PF07687 Peptidase dimerisation domain AM609_02950 PF03641 Possible lysine decarboxylase AM609_02955 PF01596 O-methyltransferase AM609_02965 PF01883 Iron-sulfur cluster assembly protein AM609_02965 PF10609 NUBPL iron-transfer P-loop NTPase AM609_02970 PF01757 Acyltransferase family AM609_02980 PF03448 MgtE intracellular N domain AM609_02980 PF01769 Divalent cation transporter AM609_02980 PF00571 CBS domain AM609_02990 PF01261 Xylose isomerase-like TIM barrel AM609_02995 PF16916 Dimerisation domain of Zinc Transporter AM609_02995 PF01545 Cation efflux family AM609_03000 PF01022 Bacterial regulatory protein, arsR family AM609_03005 PF00557 Metallopeptidase family M24 AM609_03005 PF05195 Aminopeptidase P, N-terminal domain AM609_03020 PF01914 MarC family integral membrane protein AM609_03025 PF00270 DEAD/DEAH box helicase AM609_03025 PF00271 Helicase conserved C-terminal domain AM609_03050 PF00570 HRDC domain AM609_03050 PF13361 UvrD-like helicase C-terminal domain AM609_03060 PF00437 Type II/IV secretion system protein AM609_03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM609_03100 PF03466 LysR substrate binding domain AM609_03105 PF03462 PCRF domain AM609_03105 PF00472 RF-1 domain AM609_03110 PF12848 ABC transporter AM609_03110 PF00005 ABC transporter AM609_03135 PF00005 ABC transporter AM609_03145 PF02896 PEP-utilising enzyme, TIM barrel domain AM609_03145 PF00391 PEP-utilising enzyme, mobile domain AM609_03145 PF05524 PEP-utilising enzyme, N-terminal AM609_03150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM609_03150 PF00367 phosphotransferase system, EIIB AM609_03150 PF02378 Phosphotransferase system, EIIC AM609_03155 PF02446 4-alpha-glucanotransferase AM609_03160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM609_03165 PF02378 Phosphotransferase system, EIIC AM609_03165 PF00367 phosphotransferase system, EIIB AM609_03175 PF00367 phosphotransferase system, EIIB AM609_03175 PF02378 Phosphotransferase system, EIIC AM609_03180 PF01433 Peptidase family M1 domain AM609_03180 PF11838 ERAP1-like C-terminal domain AM609_03195 PF02595 Glycerate kinase family AM609_03200 PF05649 Peptidase family M13 AM609_03200 PF01431 Peptidase family M13 AM609_03205 PF02502 Ribose/Galactose Isomerase AM609_03210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM609_03210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM609_03210 PF06827 Zinc finger found in FPG and IleRS AM609_03215 PF00561 alpha/beta hydrolase fold AM609_03225 PF02686 Glu-tRNAGln amidotransferase C subunit AM609_03230 PF01425 Amidase AM609_03235 PF02637 GatB domain AM609_03235 PF02934 GatB/GatE catalytic domain AM609_03240 PF03949 Malic enzyme, NAD binding domain AM609_03240 PF00390 Malic enzyme, N-terminal domain AM609_03265 PF00528 Binding-protein-dependent transport system inner membrane component AM609_03270 PF00528 Binding-protein-dependent transport system inner membrane component AM609_03280 PF00356 Bacterial regulatory proteins, lacI family AM609_03290 PF02080 TrkA-C domain AM609_03290 PF06826 Predicted Permease Membrane Region AM609_03295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM609_03295 PF00205 Thiamine pyrophosphate enzyme, central domain AM609_03295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM609_03300 PF01842 ACT domain AM609_03300 PF10369 Small subunit of acetolactate synthase AM609_03305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM609_03305 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM609_03340 PF00180 Isocitrate/isopropylmalate dehydrogenase AM609_03345 PF01063 Amino-transferase class IV AM609_03350 PF03816 Cell envelope-related transcriptional attenuator domain AM609_03355 PF13614 AAA domain AM609_03375 PF01501 Glycosyl transferase family 8 AM609_03375 PF00535 Glycosyl transferase family 2 AM609_03390 PF00535 Glycosyl transferase family 2 AM609_03395 PF02397 Bacterial sugar transferase AM609_03400 PF03992 Antibiotic biosynthesis monooxygenase AM609_03450 PF01061 ABC-2 type transporter AM609_03450 PF00005 ABC transporter AM609_03450 PF00498 FHA domain AM609_03465 PF04760 Translation initiation factor IF-2, N-terminal region AM609_03465 PF11987 Translation-initiation factor 2 AM609_03465 PF00009 Elongation factor Tu GTP binding domain AM609_03480 PF00005 ABC transporter AM609_03485 PF02687 FtsX-like permease family AM609_03485 PF18075 FtsX extracellular domain AM609_03490 PF01551 Peptidase family M23 AM609_03490 PF08460 Bacterial SH3 domain AM609_03495 PF01668 SmpB protein AM609_03500 PF00248 Aldo/keto reductase family AM609_03510 PF00860 Permease family AM609_03515 PF00392 Bacterial regulatory proteins, gntR family AM609_03515 PF07702 UTRA domain AM609_03520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM609_03525 PF00528 Binding-protein-dependent transport system inner membrane component AM609_03530 PF00005 ABC transporter AM609_03530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM609_03535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM609_03535 PF00005 ABC transporter AM609_03540 PF00701 Dihydrodipicolinate synthetase family AM609_03550 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM609_03555 PF00216 Bacterial DNA-binding protein AM609_03560 PF00005 ABC transporter AM609_03560 PF13732 Domain of unknown function (DUF4162) AM609_03570 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM609_03580 PF04851 Type III restriction enzyme, res subunit AM609_03595 PF01548 Transposase AM609_03595 PF02371 Transposase IS116/IS110/IS902 family AM609_03600 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM609_03600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM609_03605 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM609_03620 PF12706 Beta-lactamase superfamily domain AM609_03635 PF03129 Anticodon binding domain AM609_03635 PF04073 Aminoacyl-tRNA editing domain AM609_03635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM609_03655 PF02576 RimP N-terminal domain AM609_03655 PF17384 RimP C-terminal SH3 domain AM609_03660 PF08529 NusA N-terminal domain AM609_03660 PF13184 NusA-like KH domain AM609_03670 PF00009 Elongation factor Tu GTP binding domain AM609_03670 PF11987 Translation-initiation factor 2 AM609_03670 PF00009 Elongation factor Tu GTP binding domain AM609_03670 PF04760 Translation initiation factor IF-2, N-terminal region AM609_03670 PF04760 Translation initiation factor IF-2, N-terminal region AM609_03670 PF11987 Translation-initiation factor 2 AM609_03685 PF02033 Ribosome-binding factor A AM609_03690 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM609_03690 PF09142 tRNA Pseudouridine synthase II, C terminal AM609_03690 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM609_03695 PF17922 Tetracyclin repressor-like, C-terminal domain AM609_03695 PF00440 Bacterial regulatory proteins, tetR family AM609_03700 PF01687 Riboflavin kinase AM609_03700 PF06574 FAD synthetase AM609_03705 PF00312 Ribosomal protein S15 AM609_03715 PF02687 FtsX-like permease family AM609_03715 PF12704 MacB-like periplasmic core domain AM609_03715 PF00005 ABC transporter AM609_03730 PF01138 3' exoribonuclease family, domain 1 AM609_03730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM609_03730 PF00013 KH domain AM609_03730 PF00575 S1 RNA binding domain AM609_03735 PF05193 Peptidase M16 inactive domain AM609_03735 PF00675 Insulinase (Peptidase family M16) AM609_03740 PF00106 short chain dehydrogenase AM609_03745 PF00440 Bacterial regulatory proteins, tetR family AM609_03750 PF01113 Dihydrodipicolinate reductase, N-terminus AM609_03750 PF05173 Dihydrodipicolinate reductase, C-terminus AM609_03775 PF00701 Dihydrodipicolinate synthetase family AM609_03780 PF00501 AMP-binding enzyme AM609_03780 PF13193 AMP-binding enzyme C-terminal domain AM609_03785 PF13193 AMP-binding enzyme C-terminal domain AM609_03785 PF00501 AMP-binding enzyme AM609_03815 PF02381 MraZ protein, putative antitoxin-like AM609_03820 PF01795 MraW methylase family AM609_03835 PF02875 Mur ligase family, glutamate ligase domain AM609_03835 PF08245 Mur ligase middle domain AM609_03835 PF01225 Mur ligase family, catalytic domain AM609_03840 PF01225 Mur ligase family, catalytic domain AM609_03840 PF02875 Mur ligase family, glutamate ligase domain AM609_03840 PF08245 Mur ligase middle domain AM609_03845 PF00953 Glycosyl transferase family 4 AM609_03845 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM609_03850 PF02875 Mur ligase family, glutamate ligase domain AM609_03850 PF08245 Mur ligase middle domain AM609_03855 PF01098 Cell cycle protein AM609_03860 PF03033 Glycosyltransferase family 28 N-terminal domain AM609_03860 PF04101 Glycosyltransferase family 28 C-terminal domain AM609_03865 PF08245 Mur ligase middle domain AM609_03865 PF01225 Mur ligase family, catalytic domain AM609_03865 PF02875 Mur ligase family, glutamate ligase domain AM609_03870 PF08478 POTRA domain, FtsQ-type AM609_03870 PF03799 Cell division protein FtsQ AM609_03875 PF12327 FtsZ family, C-terminal domain AM609_03875 PF00091 Tubulin/FtsZ family, GTPase domain AM609_03885 PF04472 Cell division protein SepF AM609_03895 PF05103 DivIVA protein AM609_03900 PF01252 Signal peptidase (SPase) II AM609_03905 PF00849 RNA pseudouridylate synthase AM609_03915 PF14579 Helix-hairpin-helix motif AM609_03915 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM609_03915 PF02811 PHP domain AM609_03915 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM609_04000 PF00815 Histidinol dehydrogenase AM609_04020 PF09382 RQC domain AM609_04020 PF00270 DEAD/DEAH box helicase AM609_04020 PF16124 RecQ zinc-binding AM609_04020 PF00271 Helicase conserved C-terminal domain AM609_04020 PF00570 HRDC domain AM609_04040 PF01717 Cobalamin-independent synthase, Catalytic domain AM609_04040 PF08267 Cobalamin-independent synthase, N-terminal domain AM609_04050 PF01871 AMMECR1 AM609_04055 PF01875 Memo-like protein AM609_04060 PF00155 Aminotransferase class I and II AM609_04065 PF00475 Imidazoleglycerol-phosphate dehydratase AM609_04080 PF00117 Glutamine amidotransferase class-I AM609_04085 PF00977 Histidine biosynthesis protein AM609_04100 PF00665 Integrase core domain AM609_04100 PF13276 HTH-like domain AM609_04100 PF13333 Integrase core domain AM609_04105 PF01527 Transposase AM609_04115 PF00707 Translation initiation factor IF-3, C-terminal domain AM609_04115 PF05198 Translation initiation factor IF-3, N-terminal domain AM609_04120 PF01632 Ribosomal protein L35 AM609_04125 PF00453 Ribosomal protein L20 AM609_04130 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM609_04130 PF00588 SpoU rRNA Methylase family AM609_04150 PF00005 ABC transporter AM609_04160 PF00528 Binding-protein-dependent transport system inner membrane component AM609_04165 PF00528 Binding-protein-dependent transport system inner membrane component AM609_04170 PF07690 Major Facilitator Superfamily AM609_04195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM609_04195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM609_04215 PF00561 alpha/beta hydrolase fold AM609_04235 PF03733 Inner membrane component domain AM609_04240 PF04073 Aminoacyl-tRNA editing domain AM609_04250 PF08148 DSHCT (NUC185) domain AM609_04250 PF00270 DEAD/DEAH box helicase AM609_04250 PF00271 Helicase conserved C-terminal domain AM609_04260 PF01235 Sodium:alanine symporter family AM609_04265 PF01235 Sodium:alanine symporter family AM609_04270 PF01235 Sodium:alanine symporter family AM609_04275 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM609_04280 PF00155 Aminotransferase class I and II AM609_04290 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM609_04315 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AM609_04315 PF17770 Ribonuclease J C-terminal domain AM609_04315 PF12706 Beta-lactamase superfamily domain AM609_04325 PF17854 FtsK alpha domain AM609_04325 PF01580 FtsK/SpoIIIE family AM609_04325 PF09397 Ftsk gamma domain AM609_04340 PF00994 Probable molybdopterin binding domain AM609_04340 PF18146 Damage-inducible protein CinA KH domain AM609_04340 PF02464 Competence-damaged protein AM609_04355 PF00154 recA bacterial DNA recombination protein AM609_04360 PF02631 RecX family AM609_04365 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AM609_04365 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AM609_04370 PF16874 Glycosyl hydrolase family 36 C-terminal domain AM609_04370 PF16875 Glycosyl hydrolase family 36 N-terminal domain AM609_04375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM609_04380 PF01597 Glycine cleavage H-protein AM609_04385 PF01571 Aminomethyltransferase folate-binding domain AM609_04385 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM609_04390 PF02347 Glycine cleavage system P-protein AM609_04400 PF04055 Radical SAM superfamily AM609_04400 PF00919 Uncharacterized protein family UPF0004 AM609_04415 PF00392 Bacterial regulatory proteins, gntR family AM609_04415 PF07702 UTRA domain AM609_04435 PF03239 Iron permease FTR1 family AM609_04440 PF10634 Fe2+ transport protein AM609_04455 PF02687 FtsX-like permease family AM609_04455 PF12704 MacB-like periplasmic core domain AM609_04460 PF02687 FtsX-like permease family AM609_04460 PF12704 MacB-like periplasmic core domain AM609_04460 PF00005 ABC transporter AM609_04525 PF08468 Methyltransferase small domain N-terminal AM609_04525 PF05175 Methyltransferase small domain AM609_04535 PF05525 Branched-chain amino acid transport protein AM609_04540 PF13167 GTP-binding GTPase N-terminal AM609_04540 PF01926 50S ribosome-binding GTPase AM609_04540 PF16360 GTP-binding GTPase Middle Region AM609_04545 PF13307 Helicase C-terminal domain AM609_04550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM609_04550 PF00056 lactate/malate dehydrogenase, NAD binding domain AM609_04555 PF01726 LexA DNA binding domain AM609_04555 PF00717 Peptidase S24-like AM609_04580 PF03477 ATP cone domain AM609_04590 PF13439 Glycosyltransferase Family 4 AM609_04590 PF00534 Glycosyl transferases group 1 AM609_04600 PF00330 Aconitase family (aconitate hydratase) AM609_04605 PF00694 Aconitase C-terminal domain AM609_04610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM609_04615 PF01553 Acyltransferase AM609_04620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM609_04620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM609_04650 PF01820 D-ala D-ala ligase N-terminus AM609_04650 PF07478 D-ala D-ala ligase C-terminus AM609_04655 PF02769 AIR synthase related protein, C-terminal domain AM609_04655 PF00586 AIR synthase related protein, N-terminal domain AM609_04680 PF00830 Ribosomal L28 family AM609_04685 PF13684 Dihydroxyacetone kinase family AM609_04685 PF02734 DAK2 domain AM609_04690 PF17191 RecG wedge domain AM609_04690 PF00271 Helicase conserved C-terminal domain AM609_04690 PF00270 DEAD/DEAH box helicase AM609_04710 PF01467 Cytidylyltransferase-like AM609_04730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM609_04730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM609_04730 PF06827 Zinc finger found in FPG and IleRS AM609_04740 PF03033 Glycosyltransferase family 28 N-terminal domain AM609_04745 PF00072 Response regulator receiver domain AM609_04745 PF00196 Bacterial regulatory proteins, luxR family AM609_04750 PF13185 GAF domain AM609_04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_04750 PF13492 GAF domain AM609_04750 PF07730 Histidine kinase AM609_04755 PF00005 ABC transporter AM609_04755 PF00664 ABC transporter transmembrane region AM609_04760 PF00005 ABC transporter AM609_04760 PF00664 ABC transporter transmembrane region AM609_04765 PF02322 Cytochrome bd terminal oxidase subunit II AM609_04770 PF01654 Cytochrome bd terminal oxidase subunit I AM609_04775 PF10150 Ribonuclease E/G family AM609_04780 PF00829 Ribosomal prokaryotic L21 protein AM609_04785 PF01016 Ribosomal L27 protein AM609_04790 PF01018 GTP1/OBG AM609_04790 PF01926 50S ribosome-binding GTPase AM609_04790 PF09269 Domain of unknown function (DUF1967) AM609_04795 PF01472 PUA domain AM609_04795 PF00696 Amino acid kinase family AM609_04850 PF00171 Aldehyde dehydrogenase family AM609_04860 PF00072 Response regulator receiver domain AM609_04860 PF00486 Transcriptional regulatory protein, C terminal AM609_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_04865 PF00512 His Kinase A (phospho-acceptor) domain AM609_04865 PF18719 ArlS sensor domain AM609_04870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM609_04870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM609_04870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM609_04885 PF00664 ABC transporter transmembrane region AM609_04885 PF00005 ABC transporter AM609_04905 PF08220 DeoR-like helix-turn-helix domain AM609_04905 PF00455 DeoR C terminal sensor domain AM609_04910 PF01467 Cytidylyltransferase-like AM609_04925 PF00300 Histidine phosphatase superfamily (branch 1) AM609_04945 PF02801 Beta-ketoacyl synthase, C-terminal domain AM609_04945 PF00109 Beta-ketoacyl synthase, N-terminal domain AM609_04945 PF00550 Phosphopantetheine attachment site AM609_04945 PF14765 Polyketide synthase dehydratase AM609_04945 PF00698 Acyl transferase domain AM609_04945 PF08240 Alcohol dehydrogenase GroES-like domain AM609_04945 PF08659 KR domain AM609_04945 PF16197 Ketoacyl-synthetase C-terminal extension AM609_04945 PF08990 Erythronolide synthase docking AM609_04955 PF02903 Alpha amylase, N-terminal ig-like domain AM609_04955 PF00128 Alpha amylase, catalytic domain AM609_04965 PF00480 ROK family AM609_04970 PF01048 Phosphorylase superfamily AM609_05005 PF01230 HIT domain AM609_05010 PF13603 Leucyl-tRNA synthetase, Domain 2 AM609_05010 PF09334 tRNA synthetases class I (M) AM609_05010 PF08264 Anticodon-binding domain of tRNA AM609_05015 PF08000 Bacterial PH domain AM609_05035 PF02645 Uncharacterised protein, DegV family COG1307 AM609_05055 PF08903 Domain of unknown function (DUF1846) AM609_05060 PF01649 Ribosomal protein S20 AM609_05085 PF00005 ABC transporter AM609_05085 PF12704 MacB-like periplasmic core domain AM609_05085 PF02687 FtsX-like permease family AM609_05095 PF00072 Response regulator receiver domain AM609_05095 PF00196 Bacterial regulatory proteins, luxR family AM609_05110 PF00005 ABC transporter AM609_05120 PF00196 Bacterial regulatory proteins, luxR family AM609_05120 PF00072 Response regulator receiver domain AM609_05140 PF00290 Tryptophan synthase alpha chain AM609_05145 PF00291 Pyridoxal-phosphate dependent enzyme AM609_05150 PF02885 Glycosyl transferase family, helical bundle domain AM609_05150 PF00591 Glycosyl transferase family, a/b domain AM609_05155 PF00117 Glutamine amidotransferase class-I AM609_05160 PF04715 Anthranilate synthase component I, N terminal region AM609_05160 PF00425 chorismate binding enzyme AM609_05175 PF00535 Glycosyl transferase family 2 AM609_05180 PF03275 UDP-galactopyranose mutase AM609_05185 PF06421 GTP-binding protein LepA C-terminus AM609_05185 PF00009 Elongation factor Tu GTP binding domain AM609_05185 PF00679 Elongation factor G C-terminus AM609_05195 PF02390 Putative methyltransferase AM609_05200 PF04055 Radical SAM superfamily AM609_05230 PF08220 DeoR-like helix-turn-helix domain AM609_05230 PF01628 HrcA protein C terminal domain AM609_05235 PF01556 DnaJ C terminal domain AM609_05235 PF00226 DnaJ domain AM609_05235 PF00684 DnaJ central domain AM609_05240 PF01168 Alanine racemase, N-terminal domain AM609_05245 PF04452 RNA methyltransferase AM609_05270 PF00005 ABC transporter AM609_05280 PF00892 EamA-like transporter family AM609_05285 PF01022 Bacterial regulatory protein, arsR family AM609_05300 PF00012 Hsp70 protein AM609_05310 PF02130 Uncharacterized protein family UPF0054 AM609_05315 PF01595 Cyclin M transmembrane N-terminal domain AM609_05315 PF00571 CBS domain AM609_05315 PF03471 Transporter associated domain AM609_05330 PF01619 Proline dehydrogenase AM609_05330 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM609_05330 PF14850 DNA-binding domain of Proline dehydrogenase AM609_05330 PF00171 Aldehyde dehydrogenase family AM609_05335 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM609_05340 PF01402 Ribbon-helix-helix protein, copG family AM609_05350 PF01381 Helix-turn-helix AM609_05360 PF00005 ABC transporter AM609_05370 PF00682 HMGL-like AM609_05370 PF08502 LeuA allosteric (dimerisation) domain AM609_05375 PF11967 Recombination protein O N terminal AM609_05375 PF02565 Recombination protein O C terminal AM609_05385 PF00950 ABC 3 transport family AM609_05390 PF00005 ABC transporter AM609_05395 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM609_05395 PF01297 Zinc-uptake complex component A periplasmic AM609_05400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM609_05400 PF03129 Anticodon binding domain AM609_05415 PF01207 Dihydrouridine synthase (Dus) AM609_05430 PF00483 Nucleotidyl transferase AM609_05435 PF00534 Glycosyl transferases group 1 AM609_05435 PF13439 Glycosyltransferase Family 4 AM609_05445 PF00005 ABC transporter AM609_05460 PF00664 ABC transporter transmembrane region AM609_05460 PF00005 ABC transporter AM609_05465 PF00664 ABC transporter transmembrane region AM609_05465 PF00005 ABC transporter AM609_05470 PF00588 SpoU rRNA Methylase family AM609_05475 PF03976 Polyphosphate kinase 2 (PPK2) AM609_05480 PF02378 Phosphotransferase system, EIIC AM609_05480 PF00367 phosphotransferase system, EIIB AM609_05480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM609_05490 PF12848 ABC transporter AM609_05490 PF00005 ABC transporter AM609_05495 PF01521 Iron-sulphur cluster biosynthesis AM609_05505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM609_05505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM609_05515 PF01541 GIY-YIG catalytic domain AM609_05515 PF00929 Exonuclease AM609_05540 PF00365 Phosphofructokinase AM609_05545 PF01474 Class-II DAHP synthetase family AM609_05555 PF03793 PASTA domain AM609_05555 PF00069 Protein kinase domain AM609_05565 PF04545 Sigma-70, region 4 AM609_05565 PF00140 Sigma-70 factor, region 1.2 AM609_05565 PF04542 Sigma-70 region 2 AM609_05565 PF04539 Sigma-70 region 3 AM609_05575 PF01751 Toprim domain AM609_05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_05575 PF00986 DNA gyrase B subunit, carboxyl terminus AM609_05575 PF00204 DNA gyrase B AM609_05585 PF03989 DNA gyrase C-terminal domain, beta-propeller AM609_05585 PF00521 DNA gyrase/topoisomerase IV, subunit A AM609_05630 PF02254 TrkA-N domain AM609_05630 PF02080 TrkA-C domain AM609_05635 PF02080 TrkA-C domain AM609_05635 PF02254 TrkA-N domain AM609_05640 PF13520 Amino acid permease AM609_05645 PF01938 TRAM domain AM609_05645 PF05958 tRNA (Uracil-5-)-methyltransferase AM609_05655 PF00694 Aconitase C-terminal domain AM609_05655 PF00330 Aconitase family (aconitate hydratase) AM609_05665 PF00196 Bacterial regulatory proteins, luxR family AM609_05665 PF00072 Response regulator receiver domain AM609_05675 PF00005 ABC transporter AM609_05695 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM609_05695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM609_05710 PF00588 SpoU rRNA Methylase family AM609_05715 PF00106 short chain dehydrogenase AM609_05720 PF01161 Phosphatidylethanolamine-binding protein AM609_05730 PF00265 Thymidine kinase AM609_05740 PF01594 AI-2E family transporter AM609_05745 PF01263 Aldose 1-epimerase AM609_05770 PF01432 Peptidase family M3 AM609_05775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM609_05785 PF01032 FecCD transport family AM609_05790 PF01032 FecCD transport family AM609_05795 PF00005 ABC transporter AM609_05800 PF00248 Aldo/keto reductase family AM609_05805 PF12705 PD-(D/E)XK nuclease superfamily AM609_05810 PF02163 Peptidase family M50 AM609_05810 PF00571 CBS domain AM609_05815 PF01522 Polysaccharide deacetylase AM609_05825 PF08704 tRNA methyltransferase complex GCD14 subunit AM609_05830 PF16450 Proteasomal ATPase OB C-terminal domain AM609_05830 PF17758 Proteasomal ATPase OB N-terminal domain AM609_05830 PF00004 ATPase family associated with various cellular activities (AAA) AM609_05835 PF03136 Pup-ligase protein AM609_05840 PF05639 Pup-like protein AM609_05845 PF03136 Pup-ligase protein AM609_05865 PF00218 Indole-3-glycerol phosphate synthase AM609_05875 PF02887 Pyruvate kinase, alpha/beta domain AM609_05875 PF00224 Pyruvate kinase, barrel domain AM609_05885 PF03861 ANTAR domain AM609_05885 PF00072 Response regulator receiver domain AM609_05890 PF03061 Thioesterase superfamily AM609_05895 PF00476 DNA polymerase family A AM609_05895 PF01367 5'-3' exonuclease, C-terminal SAM fold AM609_05895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM609_05900 PF00575 S1 RNA binding domain AM609_05910 PF01121 Dephospho-CoA kinase AM609_05915 PF17757 UvrB interaction domain AM609_05915 PF12344 Ultra-violet resistance protein B AM609_05915 PF02151 UvrB/uvrC motif AM609_05915 PF04851 Type III restriction enzyme, res subunit AM609_05915 PF00271 Helicase conserved C-terminal domain AM609_05920 PF03741 Integral membrane protein TerC family AM609_05925 PF03741 Integral membrane protein TerC family AM609_05935 PF00171 Aldehyde dehydrogenase family AM609_05945 PF17755 UvrA DNA-binding domain AM609_05945 PF17760 UvrA interaction domain AM609_05945 PF00005 ABC transporter AM609_06000 PF08459 UvrC Helix-hairpin-helix N-terminal AM609_06000 PF02151 UvrB/uvrC motif AM609_06000 PF01541 GIY-YIG catalytic domain AM609_06005 PF03459 TOBE domain AM609_06010 PF00232 Glycosyl hydrolase family 1 AM609_06015 PF02222 ATP-grasp domain AM609_06015 PF01370 NAD dependent epimerase/dehydratase family AM609_06020 PF03668 P-loop ATPase protein family AM609_06025 PF01933 Uncharacterised protein family UPF0052 AM609_06030 PF02650 WhiA C-terminal HTH domain AM609_06030 PF10298 WhiA N-terminal LAGLIDADG-like domain AM609_06030 PF14527 WhiA LAGLIDADG-like domain AM609_06035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM609_06035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM609_06040 PF00162 Phosphoglycerate kinase AM609_06045 PF00121 Triosephosphate isomerase AM609_06050 PF03840 Preprotein translocase SecG subunit AM609_06055 PF00589 Phage integrase family AM609_06055 PF02899 Phage integrase, N-terminal SAM-like domain AM609_06060 PF13614 AAA domain AM609_06065 PF02616 Segregation and condensation protein ScpA AM609_06070 PF04079 Segregation and condensation complex subunit ScpB AM609_06075 PF00849 RNA pseudouridylate synthase AM609_06075 PF01479 S4 domain AM609_06080 PF02153 Prephenate dehydrogenase AM609_06095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM609_06095 PF01926 50S ribosome-binding GTPase AM609_06110 PF00342 Phosphoglucose isomerase AM609_06160 PF00069 Protein kinase domain AM609_06190 PF00005 ABC transporter AM609_06195 PF17200 Single Cache domain 2 AM609_06195 PF07730 Histidine kinase AM609_06200 PF00196 Bacterial regulatory proteins, luxR family AM609_06200 PF00072 Response regulator receiver domain AM609_06220 PF17912 MalK OB fold domain AM609_06220 PF00005 ABC transporter AM609_06225 PF00528 Binding-protein-dependent transport system inner membrane component AM609_06230 PF00528 Binding-protein-dependent transport system inner membrane component AM609_06235 PF01547 Bacterial extracellular solute-binding protein AM609_06245 PF01261 Xylose isomerase-like TIM barrel AM609_06255 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM609_06255 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM609_06255 PF16353 Domain of unknown function(DUF4981) AM609_06255 PF02929 Beta galactosidase small chain AM609_06255 PF00703 Glycosyl hydrolases family 2 AM609_06260 PF04072 Leucine carboxyl methyltransferase AM609_06270 PF00248 Aldo/keto reductase family AM609_06415 PF01580 FtsK/SpoIIIE family AM609_06415 PF12538 DNA transporter AM609_06430 PF00069 Protein kinase domain AM609_06490 PF16197 Ketoacyl-synthetase C-terminal extension AM609_06490 PF00109 Beta-ketoacyl synthase, N-terminal domain AM609_06490 PF02801 Beta-ketoacyl synthase, C-terminal domain AM609_06490 PF00698 Acyl transferase domain AM609_06490 PF08240 Alcohol dehydrogenase GroES-like domain AM609_06490 PF08659 KR domain AM609_06490 PF00550 Phosphopantetheine attachment site AM609_06490 PF08990 Erythronolide synthase docking AM609_06490 PF14765 Polyketide synthase dehydratase AM609_06490 PF09277 Erythronolide synthase, docking AM609_06500 PF16859 Tetracyclin repressor-like, C-terminal domain AM609_06500 PF00440 Bacterial regulatory proteins, tetR family AM609_06505 PF01661 Macro domain AM609_06510 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM609_06515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM609_06535 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM609_06535 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM609_06540 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM609_06540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM609_06545 PF00498 FHA domain AM609_06550 PF00376 MerR family regulatory protein AM609_06560 PF13411 MerR HTH family regulatory protein AM609_06565 PF00012 Hsp70 protein AM609_06570 PF01384 Phosphate transporter family AM609_06580 PF08244 Glycosyl hydrolases family 32 C terminal AM609_06580 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM609_06585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM609_06585 PF00367 phosphotransferase system, EIIB AM609_06585 PF02378 Phosphotransferase system, EIIC AM609_06590 PF00356 Bacterial regulatory proteins, lacI family AM609_06605 PF00005 ABC transporter AM609_06610 PF02687 FtsX-like permease family AM609_06630 PF07690 Major Facilitator Superfamily AM609_06650 PF01965 DJ-1/PfpI family AM609_06665 PF00365 Phosphofructokinase AM609_06670 PF13397 RNA polymerase-binding protein AM609_06675 PF00535 Glycosyl transferase family 2 AM609_06680 PF00795 Carbon-nitrogen hydrolase AM609_06680 PF00535 Glycosyl transferase family 2 AM609_06690 PF00271 Helicase conserved C-terminal domain AM609_06690 PF08148 DSHCT (NUC185) domain AM609_06690 PF00270 DEAD/DEAH box helicase AM609_06695 PF00781 Diacylglycerol kinase catalytic domain AM609_06705 PF02416 mttA/Hcf106 family AM609_06725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM609_06730 PF01634 ATP phosphoribosyltransferase AM609_06730 PF08029 HisG, C-terminal domain AM609_06740 PF09084 NMT1/THI5 like AM609_06745 PF00528 Binding-protein-dependent transport system inner membrane component AM609_06750 PF00474 Sodium:solute symporter family AM609_06760 PF01648 4'-phosphopantetheinyl transferase superfamily AM609_06765 PF02801 Beta-ketoacyl synthase, C-terminal domain AM609_06765 PF00109 Beta-ketoacyl synthase, N-terminal domain AM609_06770 PF01039 Carboxyl transferase domain AM609_06775 PF02785 Biotin carboxylase C-terminal domain AM609_06775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM609_06775 PF00289 Biotin carboxylase, N-terminal domain AM609_06775 PF00364 Biotin-requiring enzyme AM609_06825 PF00834 Ribulose-phosphate 3 epimerase family AM609_06830 PF01029 NusB family AM609_06830 PF01189 16S rRNA methyltransferase RsmB/F AM609_06835 PF00551 Formyl transferase AM609_06835 PF02911 Formyl transferase, C-terminal domain AM609_06845 PF17764 3′ DNA-binding domain (3′BD) AM609_06850 PF02772 S-adenosylmethionine synthetase, central domain AM609_06850 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM609_06850 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM609_06855 PF04127 DNA / pantothenate metabolism flavoprotein AM609_06855 PF02441 Flavoprotein AM609_06860 PF01192 RNA polymerase Rpb6 AM609_06865 PF00625 Guanylate kinase AM609_06870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM609_06875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM609_06875 PF02142 MGS-like domain AM609_06875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM609_06885 PF01979 Amidohydrolase family AM609_06890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM609_06890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM609_06895 PF00156 Phosphoribosyl transferase domain AM609_06905 PF05368 NmrA-like family AM609_06910 PF01029 NusB family AM609_06915 PF01132 Elongation factor P (EF-P) OB domain AM609_06915 PF08207 Elongation factor P (EF-P) KOW-like domain AM609_06915 PF09285 Elongation factor P, C-terminal AM609_06930 PF01761 3-dehydroquinate synthase AM609_06935 PF01264 Chorismate synthase AM609_06940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM609_06940 PF01488 Shikimate / quinate 5-dehydrogenase AM609_06940 PF08501 Shikimate dehydrogenase substrate binding domain AM609_06950 PF03652 Holliday junction resolvase AM609_06955 PF02272 DHHA1 domain AM609_06955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM609_06955 PF01411 tRNA synthetases class II (A) AM609_06960 PF00163 Ribosomal protein S4/S9 N-terminal domain AM609_06960 PF01479 S4 domain AM609_06965 PF01925 Sulfite exporter TauE/SafE AM609_06970 PF16193 AAA C-terminal domain AM609_06970 PF00004 ATPase family associated with various cellular activities (AAA) AM609_06970 PF12002 MgsA AAA+ ATPase C terminal AM609_06995 PF00270 DEAD/DEAH box helicase AM609_06995 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AM609_06995 PF17191 RecG wedge domain AM609_07005 PF01300 Telomere recombination AM609_07020 PF08240 Alcohol dehydrogenase GroES-like domain AM609_07020 PF00107 Zinc-binding dehydrogenase AM609_07025 PF07690 Major Facilitator Superfamily AM609_07035 PF00664 ABC transporter transmembrane region AM609_07035 PF00005 ABC transporter AM609_07040 PF00664 ABC transporter transmembrane region AM609_07040 PF00005 ABC transporter AM609_07045 PF02938 GAD domain AM609_07045 PF00152 tRNA synthetases class II (D, K and N) AM609_07045 PF01336 OB-fold nucleic acid binding domain AM609_07060 PF09084 NMT1/THI5 like AM609_07070 PF00005 ABC transporter AM609_07085 PF03880 DbpA RNA binding domain AM609_07085 PF00270 DEAD/DEAH box helicase AM609_07085 PF00271 Helicase conserved C-terminal domain AM609_07090 PF00999 Sodium/hydrogen exchanger family AM609_07090 PF02254 TrkA-N domain AM609_07095 PF13393 Histidyl-tRNA synthetase AM609_07095 PF03129 Anticodon binding domain AM609_07100 PF00753 Metallo-beta-lactamase superfamily AM609_07110 PF00005 ABC transporter AM609_07115 PF03993 Domain of Unknown Function (DUF349) AM609_07125 PF02824 TGS domain AM609_07125 PF04607 Region found in RelA / SpoT proteins AM609_07125 PF13291 ACT domain AM609_07130 PF00156 Phosphoribosyl transferase domain AM609_07135 PF02355 Protein export membrane protein AM609_07135 PF07549 SecD/SecF GG Motif AM609_07140 PF07549 SecD/SecF GG Motif AM609_07140 PF02355 Protein export membrane protein AM609_07150 PF05491 RuvB C-terminal winged helix domain AM609_07150 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM609_07150 PF17864 RuvB AAA lid domain AM609_07155 PF07499 RuvA, C-terminal domain AM609_07155 PF01330 RuvA N terminal domain AM609_07160 PF02075 Crossover junction endodeoxyribonuclease RuvC AM609_07165 PF01709 Transcriptional regulator AM609_07185 PF13439 Glycosyltransferase Family 4 AM609_07190 PF03279 Bacterial lipid A biosynthesis acyltransferase AM609_07200 PF01230 HIT domain AM609_07205 PF03129 Anticodon binding domain AM609_07205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM609_07205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM609_07250 PF00570 HRDC domain AM609_07250 PF01612 3'-5' exonuclease AM609_07255 PF04055 Radical SAM superfamily AM609_07260 PF01228 Glycine radical AM609_07260 PF02901 Pyruvate formate lyase-like AM609_07265 PF02901 Pyruvate formate lyase-like AM609_07265 PF01228 Glycine radical AM609_07270 PF02779 Transketolase, pyrimidine binding domain AM609_07270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM609_07270 PF02780 Transketolase, C-terminal domain AM609_07280 PF00654 Voltage gated chloride channel AM609_07295 PF02789 Cytosol aminopeptidase family, N-terminal domain AM609_07295 PF00883 Cytosol aminopeptidase family, catalytic domain AM609_07300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM609_07300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM609_07305 PF00364 Biotin-requiring enzyme AM609_07305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM609_07305 PF02817 e3 binding domain AM609_07330 PF03099 Biotin/lipoate A/B protein ligase family AM609_07335 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM609_07335 PF04055 Radical SAM superfamily AM609_07345 PF00120 Glutamine synthetase, catalytic domain AM609_07345 PF03951 Glutamine synthetase, beta-Grasp domain AM609_07355 PF00528 Binding-protein-dependent transport system inner membrane component AM609_07360 PF00005 ABC transporter AM609_07380 PF00934 PE family AM609_07380 PF00300 Histidine phosphatase superfamily (branch 1) AM609_07390 PF03951 Glutamine synthetase, beta-Grasp domain AM609_07390 PF00120 Glutamine synthetase, catalytic domain AM609_07395 PF02548 Ketopantoate hydroxymethyltransferase AM609_07400 PF06965 Na+/H+ antiporter 1 AM609_07400 PF13462 Thioredoxin AM609_07410 PF00557 Metallopeptidase family M24 AM609_07440 PF01381 Helix-turn-helix AM609_07470 PF03030 Inorganic H+ pyrophosphatase AM609_07500 PF00456 Transketolase, thiamine diphosphate binding domain AM609_07500 PF17831 Pyruvate dehydrogenase E1 component middle domain AM609_07505 PF00206 Lyase AM609_07505 PF10415 Fumarase C C-terminus AM609_07510 PF13556 PucR C-terminal helix-turn-helix domain AM609_07510 PF17853 GGDEF-like domain AM609_07515 PF00550 Phosphopantetheine attachment site AM609_07520 PF02801 Beta-ketoacyl synthase, C-terminal domain AM609_07520 PF00109 Beta-ketoacyl synthase, N-terminal domain AM609_07535 PF01327 Polypeptide deformylase AM609_07560 PF10410 DnaB-helicase binding domain of primase AM609_07560 PF08278 DNA primase DnaG DnaB-binding AM609_07560 PF13662 Toprim domain AM609_07560 PF01807 CHC2 zinc finger AM609_07560 PF08275 DNA primase catalytic core, N-terminal domain AM609_07565 PF01966 HD domain AM609_07565 PF13286 Phosphohydrolase-associated domain AM609_07585 PF13416 Bacterial extracellular solute-binding protein AM609_07590 PF00528 Binding-protein-dependent transport system inner membrane component AM609_07590 PF14785 Maltose transport system permease protein MalF P2 domain AM609_07595 PF00528 Binding-protein-dependent transport system inner membrane component AM609_07600 PF00128 Alpha amylase, catalytic domain AM609_07600 PF02903 Alpha amylase, N-terminal ig-like domain AM609_07605 PF00356 Bacterial regulatory proteins, lacI family AM609_07610 PF02595 Glycerate kinase family AM609_07615 PF01546 Peptidase family M20/M25/M40 AM609_07615 PF07687 Peptidase dimerisation domain AM609_07620 PF11241 Protein of unknown function (DUF3043) AM609_07625 PF00248 Aldo/keto reductase family AM609_07655 PF01180 Dihydroorotate dehydrogenase AM609_07660 PF04228 Putative neutral zinc metallopeptidase AM609_07700 PF02675 S-adenosylmethionine decarboxylase AM609_07705 PF01883 Iron-sulfur cluster assembly protein AM609_07715 PF00266 Aminotransferase class-V AM609_07720 PF00005 ABC transporter AM609_07725 PF01458 Uncharacterized protein family (UPF0051) AM609_07730 PF01458 Uncharacterized protein family (UPF0051) AM609_07745 PF00356 Bacterial regulatory proteins, lacI family AM609_07755 PF00528 Binding-protein-dependent transport system inner membrane component AM609_07790 PF11382 Copper transport outer membrane protein, MctB AM609_07800 PF02463 RecF/RecN/SMC N terminal domain AM609_07805 PF01513 ATP-NAD kinase AM609_07810 PF01728 FtsJ-like methyltransferase AM609_07810 PF01479 S4 domain AM609_07820 PF13344 Haloacid dehalogenase-like hydrolase AM609_07845 PF00579 tRNA synthetases class I (W and Y) AM609_07855 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM609_07865 PF02245 Methylpurine-DNA glycosylase (MPG) AM609_07870 PF14698 Argininosuccinate lyase C-terminal AM609_07870 PF00206 Lyase AM609_07885 PF00764 Arginosuccinate synthase AM609_07890 PF02863 Arginine repressor, C-terminal domain AM609_07890 PF01316 Arginine repressor, DNA binding domain AM609_07895 PF00202 Aminotransferase class-III AM609_07900 PF00696 Amino acid kinase family AM609_07905 PF01960 ArgJ family AM609_07910 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM609_07910 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM609_07920 PF03483 B3/4 domain AM609_07920 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM609_07920 PF01588 Putative tRNA binding domain AM609_07920 PF03147 Ferredoxin-fold anticodon binding domain AM609_07920 PF03484 tRNA synthetase B5 domain AM609_07925 PF01409 tRNA synthetases class II core domain (F) AM609_07925 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM609_07940 PF13732 Domain of unknown function (DUF4162) AM609_07940 PF00005 ABC transporter AM609_07955 PF00528 Binding-protein-dependent transport system inner membrane component AM609_07980 PF01138 3' exoribonuclease family, domain 1 AM609_07980 PF03725 3' exoribonuclease family, domain 2 AM609_07985 PF01725 Ham1 family AM609_07990 PF00583 Acetyltransferase (GNAT) family AM609_07995 PF04551 GcpE protein AM609_08000 PF00288 GHMP kinases N terminal domain AM609_08000 PF10509 Galactokinase galactose-binding signature AM609_08000 PF08544 GHMP kinases C terminal AM609_08040 PF02163 Peptidase family M50 AM609_08040 PF17820 PDZ domain AM609_08045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM609_08045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM609_08045 PF13288 DXP reductoisomerase C-terminal domain AM609_08055 PF04055 Radical SAM superfamily AM609_08065 PF01765 Ribosome recycling factor AM609_08070 PF00696 Amino acid kinase family AM609_08075 PF00889 Elongation factor TS AM609_08080 PF00318 Ribosomal protein S2 AM609_08085 PF01551 Peptidase family M23 AM609_08090 PF02899 Phage integrase, N-terminal SAM-like domain AM609_08090 PF00589 Phage integrase family AM609_08095 PF02481 DNA recombination-mediator protein A AM609_08095 PF17782 DprA winged helix domain AM609_08100 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM609_08100 PF01078 Magnesium chelatase, subunit ChlI AM609_08105 PF02021 Uncharacterised protein family UPF0102 AM609_08110 PF10611 Protein of unknown function (DUF2469) AM609_08115 PF01351 Ribonuclease HII AM609_08120 PF10502 Signal peptidase, peptidase S26 AM609_08130 PF01245 Ribosomal protein L19 AM609_08135 PF10502 Signal peptidase, peptidase S26 AM609_08140 PF01746 tRNA (Guanine-1)-methyltransferase AM609_08145 PF01782 RimM N-terminal domain AM609_08155 PF00886 Ribosomal protein S16 AM609_08170 PF00005 ABC transporter AM609_08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_08180 PF07730 Histidine kinase AM609_08185 PF00196 Bacterial regulatory proteins, luxR family AM609_08185 PF00072 Response regulator receiver domain AM609_08190 PF02463 RecF/RecN/SMC N terminal domain AM609_08195 PF00448 SRP54-type protein, GTPase domain AM609_08195 PF02881 SRP54-type protein, helical bundle domain AM609_08195 PF02978 Signal peptide binding domain AM609_08200 PF00005 ABC transporter AM609_08210 PF07730 Histidine kinase AM609_08215 PF00196 Bacterial regulatory proteins, luxR family AM609_08215 PF00072 Response regulator receiver domain AM609_08220 PF02881 SRP54-type protein, helical bundle domain AM609_08220 PF00448 SRP54-type protein, GTPase domain AM609_08245 PF00196 Bacterial regulatory proteins, luxR family AM609_08245 PF00072 Response regulator receiver domain AM609_08255 PF00005 ABC transporter AM609_08265 PF03572 Peptidase family S41 AM609_08270 PF13732 Domain of unknown function (DUF4162) AM609_08270 PF00005 ABC transporter AM609_08280 PF00334 Nucleoside diphosphate kinase AM609_08290 PF02734 DAK2 domain AM609_08295 PF08245 Mur ligase middle domain AM609_08295 PF02875 Mur ligase family, glutamate ligase domain AM609_08300 PF02397 Bacterial sugar transferase AM609_08320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM609_08320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM609_08320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM609_08325 PF00535 Glycosyl transferase family 2 AM609_08370 PF13344 Haloacid dehalogenase-like hydrolase AM609_08380 PF02687 FtsX-like permease family AM609_08380 PF00005 ABC transporter AM609_08380 PF12704 MacB-like periplasmic core domain AM609_08385 PF00072 Response regulator receiver domain AM609_08385 PF03861 ANTAR domain AM609_08435 PF08264 Anticodon-binding domain of tRNA AM609_08435 PF00133 tRNA synthetases class I (I, L, M and V) AM609_08440 PF07702 UTRA domain AM609_08440 PF00392 Bacterial regulatory proteins, gntR family AM609_08445 PF02378 Phosphotransferase system, EIIC AM609_08445 PF00367 phosphotransferase system, EIIB AM609_08445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM609_08450 PF16657 Maltogenic Amylase, C-terminal domain AM609_08450 PF00128 Alpha amylase, catalytic domain AM609_08470 PF00106 short chain dehydrogenase AM609_08480 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AM609_08485 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM609_08495 PF13784 Fic/DOC family N-terminal AM609_08495 PF02661 Fic/DOC family AM609_08500 PF00005 ABC transporter AM609_08505 PF00005 ABC transporter AM609_08505 PF08021 Siderophore-interacting FAD-binding domain AM609_08505 PF00664 ABC transporter transmembrane region AM609_08505 PF04954 Siderophore-interacting protein AM609_08510 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM609_08510 PF03807 NADP oxidoreductase coenzyme F420-dependent AM609_08515 PF00005 ABC transporter AM609_08530 PF08264 Anticodon-binding domain of tRNA AM609_08530 PF00133 tRNA synthetases class I (I, L, M and V) AM609_08535 PF00501 AMP-binding enzyme AM609_08540 PF00501 AMP-binding enzyme AM609_08545 PF02153 Prephenate dehydrogenase AM609_08545 PF01817 Chorismate mutase type II AM609_08550 PF07724 AAA domain (Cdc48 subfamily) AM609_08550 PF06689 ClpX C4-type zinc finger AM609_08550 PF10431 C-terminal, D2-small domain, of ClpB protein AM609_08555 PF00574 Clp protease AM609_08560 PF00574 Clp protease AM609_08565 PF00005 ABC transporter AM609_08600 PF00005 ABC transporter AM609_08620 PF07690 Major Facilitator Superfamily AM609_08625 PF01547 Bacterial extracellular solute-binding protein AM609_08630 PF03992 Antibiotic biosynthesis monooxygenase AM609_08685 PF01527 Transposase AM609_08735 PF01783 Ribosomal L32p protein family AM609_08740 PF01205 Uncharacterized protein family UPF0029 AM609_08740 PF09186 Domain of unknown function (DUF1949) AM609_08745 PF00291 Pyridoxal-phosphate dependent enzyme AM609_08750 PF00132 Bacterial transferase hexapeptide (six repeats) AM609_08755 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM609_08755 PF03120 NAD-dependent DNA ligase OB-fold domain AM609_08755 PF01653 NAD-dependent DNA ligase adenylation domain AM609_08755 PF12826 Helix-hairpin-helix motif AM609_08755 PF00533 BRCA1 C Terminus (BRCT) domain AM609_08770 PF02467 Transcription factor WhiB AM609_08775 PF07568 Histidine kinase AM609_08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_08775 PF12282 Signal transduction histidine kinase AM609_08785 PF02566 OsmC-like protein AM609_08795 PF00303 Thymidylate synthase AM609_08800 PF00186 Dihydrofolate reductase AM609_08805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM609_08815 PF00528 Binding-protein-dependent transport system inner membrane component AM609_08820 PF00571 CBS domain AM609_08820 PF00005 ABC transporter AM609_08830 PF00698 Acyl transferase domain AM609_08830 PF00550 Phosphopantetheine attachment site AM609_08830 PF08659 KR domain AM609_08830 PF02801 Beta-ketoacyl synthase, C-terminal domain AM609_08830 PF00109 Beta-ketoacyl synthase, N-terminal domain AM609_08830 PF16197 Ketoacyl-synthetase C-terminal extension AM609_08830 PF08240 Alcohol dehydrogenase GroES-like domain AM609_08830 PF14765 Polyketide synthase dehydratase AM609_08845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM609_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_08860 PF00512 His Kinase A (phospho-acceptor) domain AM609_08860 PF00672 HAMP domain AM609_08875 PF00206 Lyase AM609_08875 PF10415 Fumarase C C-terminus AM609_08880 PF04237 YjbR AM609_08890 PF01048 Phosphorylase superfamily AM609_08900 PF00196 Bacterial regulatory proteins, luxR family AM609_08900 PF00072 Response regulator receiver domain AM609_08920 PF03699 Uncharacterised protein family (UPF0182) AM609_08935 PF05362 Lon protease (S16) C-terminal proteolytic domain AM609_08935 PF13180 PDZ domain AM609_08945 PF00580 UvrD/REP helicase N-terminal domain AM609_08945 PF00570 HRDC domain AM609_08945 PF13361 UvrD-like helicase C-terminal domain AM609_08950 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AM609_08950 PF09297 NADH pyrophosphatase zinc ribbon domain AM609_08950 PF00293 NUDIX domain AM609_08955 PF00266 Aminotransferase class-V AM609_09010 PF00005 ABC transporter AM609_09015 PF00392 Bacterial regulatory proteins, gntR family AM609_09040 PF13569 Domain of unknown function (DUF4132) AM609_09060 PF05762 VWA domain containing CoxE-like protein AM609_09070 PF07728 AAA domain (dynein-related subfamily) AM609_09075 PF07669 Eco57I restriction-modification methylase AM609_09080 PF00766 Electron transfer flavoprotein FAD-binding domain AM609_09080 PF01012 Electron transfer flavoprotein domain AM609_09085 PF01012 Electron transfer flavoprotein domain AM609_09090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM609_09090 PF00128 Alpha amylase, catalytic domain AM609_09100 PF00753 Metallo-beta-lactamase superfamily AM609_09100 PF12706 Beta-lactamase superfamily domain AM609_09110 PF00579 tRNA synthetases class I (W and Y) AM609_09120 PF11896 Domain of unknown function (DUF3416) AM609_09120 PF00128 Alpha amylase, catalytic domain AM609_09125 PF18085 Maltokinase N-terminal cap domain AM609_09125 PF01636 Phosphotransferase enzyme family AM609_09130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM609_09130 PF00128 Alpha amylase, catalytic domain AM609_09130 PF02806 Alpha amylase, C-terminal all-beta domain AM609_09135 PF00343 Carbohydrate phosphorylase AM609_09145 PF00085 Thioredoxin AM609_09175 PF00056 lactate/malate dehydrogenase, NAD binding domain AM609_09175 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM609_09180 PF00375 Sodium:dicarboxylate symporter family AM609_09190 PF02142 MGS-like domain AM609_09190 PF01808 AICARFT/IMPCHase bienzyme AM609_09200 PF00549 CoA-ligase AM609_09200 PF02629 CoA binding domain AM609_09205 PF08442 ATP-grasp domain AM609_09205 PF00549 CoA-ligase AM609_09215 PF00365 Phosphofructokinase AM609_09220 PF00005 ABC transporter AM609_09220 PF00664 ABC transporter transmembrane region AM609_09225 PF00664 ABC transporter transmembrane region AM609_09225 PF00005 ABC transporter AM609_09270 PF00356 Bacterial regulatory proteins, lacI family AM609_09280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM609_09280 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AM609_09295 PF02463 RecF/RecN/SMC N terminal domain AM609_09305 PF00528 Binding-protein-dependent transport system inner membrane component AM609_09310 PF00528 Binding-protein-dependent transport system inner membrane component AM609_09320 PF00480 ROK family AM609_09330 PF00356 Bacterial regulatory proteins, lacI family AM609_09340 PF00528 Binding-protein-dependent transport system inner membrane component AM609_09345 PF00528 Binding-protein-dependent transport system inner membrane component AM609_09360 PF07690 Major Facilitator Superfamily AM609_09385 PF13340 Putative transposase of IS4/5 family (DUF4096) AM609_09390 PF00580 UvrD/REP helicase N-terminal domain AM609_09390 PF13361 UvrD-like helicase C-terminal domain AM609_09420 PF17827 PrmC N-terminal domain AM609_09425 PF03462 PCRF domain AM609_09425 PF00472 RF-1 domain AM609_09430 PF01197 Ribosomal protein L31 AM609_09440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM609_09440 PF07497 Rho termination factor, RNA-binding domain AM609_09440 PF07498 Rho termination factor, N-terminal domain AM609_09450 PF00288 GHMP kinases N terminal domain AM609_09455 PF00742 Homoserine dehydrogenase AM609_09455 PF01842 ACT domain AM609_09455 PF03447 Homoserine dehydrogenase, NAD binding domain AM609_09465 PF00005 ABC transporter AM609_09475 PF00005 ABC transporter AM609_09475 PF08021 Siderophore-interacting FAD-binding domain AM609_09475 PF00664 ABC transporter transmembrane region AM609_09475 PF04954 Siderophore-interacting protein AM609_09480 PF00005 ABC transporter AM609_09520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM609_09520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM609_09525 PF00750 tRNA synthetases class I (R) AM609_09525 PF03485 Arginyl tRNA synthetase N terminal domain AM609_09525 PF05746 DALR anticodon binding domain AM609_09530 PF03358 NADPH-dependent FMN reductase AM609_09530 PF01566 Natural resistance-associated macrophage protein AM609_09560 PF00135 Carboxylesterase family AM609_09565 PF03009 Glycerophosphoryl diester phosphodiesterase family AM609_09570 PF01464 Transglycosylase SLT domain AM609_09570 PF10145 Phage-related minor tail protein AM609_09570 PF01551 Peptidase family M23 AM609_09585 PF00571 CBS domain AM609_09585 PF01595 Cyclin M transmembrane N-terminal domain AM609_09600 PF16870 2-oxoglutarate dehydrogenase C-terminal AM609_09600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM609_09600 PF02779 Transketolase, pyrimidine binding domain AM609_09600 PF16078 2-oxoglutarate dehydrogenase N-terminus AM609_09600 PF00676 Dehydrogenase E1 component AM609_09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM609_09630 PF16859 Tetracyclin repressor-like, C-terminal domain AM609_09630 PF00440 Bacterial regulatory proteins, tetR family AM609_09635 PF13732 Domain of unknown function (DUF4162) AM609_09635 PF00005 ABC transporter AM609_09645 PF13490 Putative zinc-finger AM609_09650 PF08281 Sigma-70, region 4 AM609_09650 PF04542 Sigma-70 region 2 AM609_09660 PF03971 Monomeric isocitrate dehydrogenase AM609_09665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM609_09670 PF03193 RsgA GTPase AM609_09700 PF06463 Molybdenum Cofactor Synthesis C AM609_09700 PF04055 Radical SAM superfamily AM609_09710 PF02391 MoaE protein AM609_09715 PF00994 Probable molybdopterin binding domain AM609_09715 PF03454 MoeA C-terminal region (domain IV) AM609_09715 PF03453 MoeA N-terminal region (domain I and II) AM609_09730 PF00994 Probable molybdopterin binding domain AM609_09730 PF01967 MoaC family AM609_09735 PF07690 Major Facilitator Superfamily AM609_09745 PF13247 4Fe-4S dicluster domain AM609_09745 PF14711 Respiratory nitrate reductase beta C-terminal AM609_09755 PF00384 Molybdopterin oxidoreductase AM609_09755 PF02613 Nitrate reductase delta subunit AM609_09755 PF02665 Nitrate reductase gamma subunit AM609_09780 PF03459 TOBE domain AM609_09780 PF00005 ABC transporter AM609_09790 PF00107 Zinc-binding dehydrogenase AM609_09790 PF08240 Alcohol dehydrogenase GroES-like domain AM609_09805 PF02384 N-6 DNA Methylase AM609_09810 PF00459 Inositol monophosphatase family AM609_09815 PF02673 Bacitracin resistance protein BacA AM609_09820 PF00691 OmpA family AM609_09820 PF05736 OprF membrane domain AM609_09850 PF00149 Calcineurin-like phosphoesterase AM609_09850 PF12320 Type 5 capsule protein repressor C-terminal domain AM609_09855 PF13476 AAA domain AM609_09895 PF07516 SecA Wing and Scaffold domain AM609_09895 PF01043 SecA preprotein cross-linking domain AM609_09895 PF07517 SecA DEAD-like domain AM609_09905 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AM609_09905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM609_09910 PF10646 Sporulation and spore germination AM609_09910 PF10647 Lipoprotein LpqB beta-propeller domain AM609_09915 PF00512 His Kinase A (phospho-acceptor) domain AM609_09915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_09915 PF00672 HAMP domain AM609_09920 PF00072 Response regulator receiver domain AM609_09920 PF00486 Transcriptional regulatory protein, C terminal AM609_09935 PF14258 Domain of unknown function (DUF4350) AM609_09940 PF17863 AAA lid domain AM609_09940 PF07726 ATPase family associated with various cellular activities (AAA) AM609_09945 PF01882 Protein of unknown function DUF58 AM609_09980 PF02467 Transcription factor WhiB AM609_09990 PF01238 Phosphomannose isomerase type I AM609_09995 PF00483 Nucleotidyl transferase AM609_10000 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM609_10025 PF14524 Wzt C-terminal domain AM609_10025 PF00005 ABC transporter AM609_10035 PF01370 NAD dependent epimerase/dehydratase family AM609_10050 PF01370 NAD dependent epimerase/dehydratase family AM609_10075 PF00892 EamA-like transporter family AM609_10085 PF16363 GDP-mannose 4,6 dehydratase AM609_10110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM609_10110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM609_10110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM609_10140 PF00534 Glycosyl transferases group 1 AM609_10140 PF13439 Glycosyltransferase Family 4 AM609_10155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM609_10160 PF00132 Bacterial transferase hexapeptide (six repeats) AM609_10180 PF03816 Cell envelope-related transcriptional attenuator domain AM609_10185 PF03816 Cell envelope-related transcriptional attenuator domain AM609_10190 PF01370 NAD dependent epimerase/dehydratase family AM609_10195 PF00731 AIR carboxylase AM609_10225 PF09335 SNARE associated Golgi protein AM609_10230 PF13426 PAS domain AM609_10230 PF00672 HAMP domain AM609_10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_10230 PF00512 His Kinase A (phospho-acceptor) domain AM609_10235 PF00486 Transcriptional regulatory protein, C terminal AM609_10235 PF00072 Response regulator receiver domain AM609_10240 PF16701 Adenylate cyclase regulatory domain AM609_10240 PF00211 Adenylate and Guanylate cyclase catalytic domain AM609_10250 PF00665 Integrase core domain AM609_10255 PF01695 IstB-like ATP binding protein AM609_10260 PF04945 YHS domain AM609_10275 PF00512 His Kinase A (phospho-acceptor) domain AM609_10275 PF00672 HAMP domain AM609_10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_10280 PF00486 Transcriptional regulatory protein, C terminal AM609_10280 PF00072 Response regulator receiver domain AM609_10290 PF02545 Maf-like protein AM609_10300 PF00471 Ribosomal protein L33 AM609_10320 PF00196 Bacterial regulatory proteins, luxR family AM609_10320 PF00072 Response regulator receiver domain AM609_10340 PF00004 ATPase family associated with various cellular activities (AAA) AM609_10340 PF17862 AAA+ lid domain AM609_10340 PF06480 FtsH Extracellular AM609_10340 PF01434 Peptidase family M41 AM609_10350 PF01435 Peptidase family M48 AM609_10355 PF00291 Pyridoxal-phosphate dependent enzyme AM609_10440 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM609_10440 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM609_10445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM609_10460 PF00361 Proton-conducting membrane transporter AM609_10465 PF00361 Proton-conducting membrane transporter AM609_10470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM609_10470 PF00361 Proton-conducting membrane transporter AM609_10475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM609_10485 PF12838 4Fe-4S dicluster domain AM609_10490 PF00146 NADH dehydrogenase AM609_10495 PF00384 Molybdopterin oxidoreductase AM609_10495 PF01568 Molydopterin dinucleotide binding domain AM609_10495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM609_10500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM609_10500 PF10531 SLBB domain AM609_10500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM609_10510 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM609_10515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM609_10520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM609_10525 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM609_10530 PF01494 FAD binding domain AM609_10545 PF01209 ubiE/COQ5 methyltransferase family AM609_10550 PF13180 PDZ domain AM609_10555 PF18374 Enolase N-terminal domain-like AM609_10555 PF13378 Enolase C-terminal domain-like AM609_10560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM609_10560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM609_10590 PF10099 Anti-sigma-K factor rskA AM609_10595 PF04542 Sigma-70 region 2 AM609_10595 PF04545 Sigma-70, region 4 AM609_10600 PF00578 AhpC/TSA family AM609_10600 PF17991 Thioredoxin like C-terminal domain AM609_10600 PF02683 Cytochrome C biogenesis protein transmembrane region AM609_10610 PF18255 DNA processing protein A sterile alpha motif domain AM609_10610 PF02481 DNA recombination-mediator protein A AM609_10625 PF01040 UbiA prenyltransferase family AM609_10650 PF00300 Histidine phosphatase superfamily (branch 1) AM609_10655 PF14602 Hexapeptide repeat of succinyl-transferase AM609_10655 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AM609_10665 PF02910 Fumarate reductase flavoprotein C-term AM609_10665 PF00890 FAD binding domain AM609_10690 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AM609_10695 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM609_10700 PF00232 Glycosyl hydrolase family 1 AM609_10710 PF00155 Aminotransferase class I and II AM609_10725 PF00037 4Fe-4S binding domain AM609_10745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM609_10750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM609_10750 PF00005 ABC transporter AM609_10755 PF12911 N-terminal TM domain of oligopeptide transport permease C AM609_10755 PF00528 Binding-protein-dependent transport system inner membrane component AM609_10760 PF00528 Binding-protein-dependent transport system inner membrane component AM609_10765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM609_10765 PF00005 ABC transporter AM609_10770 PF00528 Binding-protein-dependent transport system inner membrane component AM609_10770 PF12911 N-terminal TM domain of oligopeptide transport permease C AM609_10775 PF00528 Binding-protein-dependent transport system inner membrane component AM609_10785 PF00296 Luciferase-like monooxygenase AM609_10795 PF02632 BioY family AM609_10815 PF00293 NUDIX domain AM609_10815 PF13344 Haloacid dehalogenase-like hydrolase AM609_10825 PF01734 Patatin-like phospholipase AM609_10830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM609_10845 PF02127 Aminopeptidase I zinc metalloprotease (M18) AM609_10890 PF00485 Phosphoribulokinase / Uridine kinase family AM609_10905 PF12728 Helix-turn-helix domain AM609_10905 PF02661 Fic/DOC family AM609_10910 PF02502 Ribose/Galactose Isomerase AM609_10915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM609_10920 PF02308 MgtC family AM609_10975 PF00472 RF-1 domain AM609_10975 PF03462 PCRF domain AM609_10985 PF01381 Helix-turn-helix AM609_10995 PF01926 50S ribosome-binding GTPase AM609_10995 PF06071 Protein of unknown function (DUF933) AM609_11005 PF02646 RmuC family AM609_11015 PF02401 LytB protein AM609_11020 PF02601 Exonuclease VII, large subunit AM609_11020 PF13742 OB-fold nucleic acid binding domain AM609_11025 PF02609 Exonuclease VII small subunit AM609_11030 PF00294 pfkB family carbohydrate kinase AM609_11035 PF13638 PIN domain AM609_11035 PF02562 PhoH-like protein AM609_11040 PF01255 Putative undecaprenyl diphosphate synthase AM609_11045 PF03006 Haemolysin-III related AM609_11050 PF03449 Transcription elongation factor, N-terminal AM609_11050 PF01272 Transcription elongation factor, GreA/GreB, C-term AM609_11055 PF01625 Peptide methionine sulfoxide reductase AM609_11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM609_11070 PF03466 LysR substrate binding domain AM609_11085 PF03551 Transcriptional regulator PadR-like family AM609_11095 PF03358 NADPH-dependent FMN reductase AM609_11100 PF00291 Pyridoxal-phosphate dependent enzyme AM609_11100 PF00585 C-terminal regulatory domain of Threonine dehydratase AM609_11105 PF13026 Protein of unknown function (DUF3887) AM609_11105 PF12146 Serine aminopeptidase, S33 AM609_11120 PF08361 MAATS-type transcriptional repressor, C-terminal region AM609_11120 PF00440 Bacterial regulatory proteins, tetR family AM609_11135 PF00920 Dehydratase family AM609_11140 PF17676 LD-carboxypeptidase C-terminal domain AM609_11140 PF02016 LD-carboxypeptidase N-terminal domain AM609_11145 PF01425 Amidase AM609_11160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM609_11185 PF00005 ABC transporter AM609_11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_11195 PF00672 HAMP domain AM609_11195 PF07730 Histidine kinase AM609_11200 PF00072 Response regulator receiver domain AM609_11200 PF00196 Bacterial regulatory proteins, luxR family AM609_11205 PF01195 Peptidyl-tRNA hydrolase AM609_11210 PF01386 Ribosomal L25p family AM609_11210 PF14693 Ribosomal protein TL5, C-terminal domain AM609_11215 PF01487 Type I 3-dehydroquinase AM609_11220 PF02541 Ppx/GppA phosphatase family AM609_11235 PF00113 Enolase, C-terminal TIM barrel domain AM609_11235 PF03952 Enolase, N-terminal domain AM609_11245 PF00270 DEAD/DEAH box helicase AM609_11245 PF00271 Helicase conserved C-terminal domain AM609_11245 PF03461 TRCF domain AM609_11245 PF17757 UvrB interaction domain AM609_11245 PF02559 CarD-like/TRCF domain AM609_11255 PF14572 Phosphoribosyl synthetase-associated domain AM609_11255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM609_11260 PF12804 MobA-like NTP transferase domain AM609_11270 PF00440 Bacterial regulatory proteins, tetR family AM609_11275 PF00005 ABC transporter AM609_11275 PF16326 ABC transporter C-terminal domain AM609_11275 PF12848 ABC transporter AM609_11280 PF08544 GHMP kinases C terminal AM609_11280 PF00288 GHMP kinases N terminal domain AM609_11285 PF00398 Ribosomal RNA adenine dimethylase AM609_11295 PF01026 TatD related DNase AM609_11300 PF09334 tRNA synthetases class I (M) AM609_11310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM609_11315 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM609_11315 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase AM609_11345 PF02082 Transcriptional regulator AM609_11365 PF00994 Probable molybdopterin binding domain AM609_11365 PF03454 MoeA C-terminal region (domain IV) AM609_11365 PF03453 MoeA N-terminal region (domain I and II) AM609_11370 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM609_11380 PF01741 Large-conductance mechanosensitive channel, MscL AM609_11400 PF00582 Universal stress protein family AM609_11405 PF01476 LysM domain AM609_11405 PF00877 NlpC/P60 family AM609_11405 PF08239 Bacterial SH3 domain AM609_11410 PF01476 LysM domain AM609_11410 PF08239 Bacterial SH3 domain AM609_11410 PF00877 NlpC/P60 family AM609_11415 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM609_11415 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM609_11415 PF18357 Diphteria toxin repressor SH3 domain AM609_11425 PF00860 Permease family AM609_11430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM609_11440 PF11228 Protein of unknown function (DUF3027) AM609_11445 PF00171 Aldehyde dehydrogenase family AM609_11455 PF01227 GTP cyclohydrolase I AM609_11460 PF01434 Peptidase family M41 AM609_11460 PF17862 AAA+ lid domain AM609_11460 PF00004 ATPase family associated with various cellular activities (AAA) AM609_11550 PF01867 CRISPR associated protein Cas1 AM609_11555 PF09827 CRISPR associated protein Cas2 AM609_11570 PF00226 DnaJ domain AM609_11570 PF01556 DnaJ C terminal domain AM609_11570 PF00684 DnaJ central domain AM609_11605 PF00719 Inorganic pyrophosphatase AM609_11610 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AM609_11610 PF00877 NlpC/P60 family AM609_11615 PF01053 Cys/Met metabolism PLP-dependent enzyme AM609_11620 PF00561 alpha/beta hydrolase fold AM609_11625 PF09924 Uncharacterised conserved protein (DUF2156) AM609_11655 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM609_11660 PF07726 ATPase family associated with various cellular activities (AAA) AM609_11660 PF17863 AAA lid domain AM609_11670 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM609_11670 PF00391 PEP-utilising enzyme, mobile domain AM609_11670 PF02896 PEP-utilising enzyme, TIM barrel domain AM609_11690 PF00004 ATPase family associated with various cellular activities (AAA) AM609_11690 PF17871 AAA lid domain AM609_11690 PF07724 AAA domain (Cdc48 subfamily) AM609_11690 PF10431 C-terminal, D2-small domain, of ClpB protein AM609_11690 PF02861 Clp amino terminal domain, pathogenicity island component AM609_11700 PF00072 Response regulator receiver domain AM609_11700 PF00196 Bacterial regulatory proteins, luxR family AM609_11705 PF07730 Histidine kinase AM609_11715 PF00005 ABC transporter AM609_11715 PF13732 Domain of unknown function (DUF4162) AM609_11725 PF00072 Response regulator receiver domain AM609_11725 PF00196 Bacterial regulatory proteins, luxR family AM609_11740 PF13732 Domain of unknown function (DUF4162) AM609_11740 PF00005 ABC transporter AM609_11770 PF01580 FtsK/SpoIIIE family AM609_11830 PF00069 Protein kinase domain AM609_11830 PF13191 AAA ATPase domain AM609_11845 PF07726 ATPase family associated with various cellular activities (AAA) AM609_11845 PF17863 AAA lid domain AM609_11880 PF02580 D-Tyr-tRNA(Tyr) deacylase AM609_11895 PF08768 Domain of unknown function (DUF1794) AM609_11905 PF00486 Transcriptional regulatory protein, C terminal AM609_11910 PF00300 Histidine phosphatase superfamily (branch 1) AM609_11910 PF00293 NUDIX domain AM609_11915 PF17941 Polyphosphate kinase C-terminal domain 1 AM609_11915 PF13089 Polyphosphate kinase N-terminal domain AM609_11915 PF02503 Polyphosphate kinase middle domain AM609_11915 PF13090 Polyphosphate kinase C-terminal domain 2 AM609_11970 PF00271 Helicase conserved C-terminal domain AM609_11970 PF00270 DEAD/DEAH box helicase AM609_11985 PF13340 Putative transposase of IS4/5 family (DUF4096) AM609_12040 PF00005 ABC transporter AM609_12060 PF12704 MacB-like periplasmic core domain AM609_12060 PF02687 FtsX-like permease family AM609_12070 PF00933 Glycosyl hydrolase family 3 N terminal domain AM609_12075 PF06800 Sugar transport protein AM609_12085 PF04851 Type III restriction enzyme, res subunit AM609_12085 PF00271 Helicase conserved C-terminal domain AM609_12115 PF04536 TPM domain AM609_12130 PF00072 Response regulator receiver domain AM609_12130 PF00486 Transcriptional regulatory protein, C terminal AM609_12135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_12135 PF00512 His Kinase A (phospho-acceptor) domain AM609_12135 PF00672 HAMP domain AM609_12160 PF00118 TCP-1/cpn60 chaperonin family AM609_12175 PF03167 Uracil DNA glycosylase superfamily AM609_12200 PF00069 Protein kinase domain AM609_12200 PF00400 WD domain, G-beta repeat AM609_12205 PF00005 ABC transporter AM609_12205 PF17912 MalK OB fold domain AM609_12205 PF03459 TOBE domain AM609_12230 PF00588 SpoU rRNA Methylase family AM609_12230 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM609_12235 PF01406 tRNA synthetases class I (C) catalytic domain AM609_12235 PF09190 DALR domain AM609_12240 PF02542 YgbB family AM609_12250 PF05958 tRNA (Uracil-5-)-methyltransferase AM609_12290 PF01116 Fructose-bisphosphate aldolase class-II AM609_12295 PF00455 DeoR C terminal sensor domain AM609_12295 PF08220 DeoR-like helix-turn-helix domain AM609_12300 PF00854 POT family AM609_12305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM609_12305 PF02378 Phosphotransferase system, EIIC AM609_12310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM609_12315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM609_12315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM609_12325 PF02540 NAD synthase AM609_12325 PF00795 Carbon-nitrogen hydrolase AM609_12335 PF00440 Bacterial regulatory proteins, tetR family AM609_12345 PF00004 ATPase family associated with various cellular activities (AAA) AM609_12345 PF07724 AAA domain (Cdc48 subfamily) AM609_12345 PF17871 AAA lid domain AM609_12345 PF02861 Clp amino terminal domain, pathogenicity island component AM609_12345 PF10431 C-terminal, D2-small domain, of ClpB protein AM609_12355 PF13443 Cro/C1-type HTH DNA-binding domain AM609_12370 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM609_12370 PF00326 Prolyl oligopeptidase family AM609_12390 PF00072 Response regulator receiver domain AM609_12390 PF00486 Transcriptional regulatory protein, C terminal AM609_12400 PF13411 MerR HTH family regulatory protein AM609_12405 PF00684 DnaJ central domain AM609_12405 PF01556 DnaJ C terminal domain AM609_12405 PF00226 DnaJ domain AM609_12410 PF01025 GrpE AM609_12415 PF00012 Hsp70 protein AM609_12430 PF00005 ABC transporter AM609_12430 PF02687 FtsX-like permease family AM609_12430 PF12704 MacB-like periplasmic core domain AM609_12460 PF01850 PIN domain AM609_12505 PF00939 Sodium:sulfate symporter transmembrane region AM609_12545 PF12728 Helix-turn-helix domain AM609_12565 PF00271 Helicase conserved C-terminal domain AM609_12565 PF00176 SNF2 family N-terminal domain AM609_12565 PF18339 RapA N-terminal Tudor like domain 1 AM609_12565 PF18337 RapA N-terminal Tudor like domain AM609_12565 PF12137 RNA polymerase recycling family C-terminal AM609_12600 PF00271 Helicase conserved C-terminal domain AM609_12600 PF08494 DEAD/H associated AM609_12600 PF00270 DEAD/DEAH box helicase AM609_12605 PF13361 UvrD-like helicase C-terminal domain AM609_12605 PF00580 UvrD/REP helicase N-terminal domain AM609_12605 PF12462 DNA helicase IV / RNA helicase N terminal AM609_12630 PF12102 Domain of unknown function (DUF3578) AM609_12630 PF07728 AAA domain (dynein-related subfamily) AM609_12690 PF00440 Bacterial regulatory proteins, tetR family AM609_12710 PF00223 Photosystem I psaA/psaB protein AM609_12710 PF00691 OmpA family AM609_12720 PF00512 His Kinase A (phospho-acceptor) domain AM609_12720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_12720 PF00672 HAMP domain AM609_12725 PF00072 Response regulator receiver domain AM609_12725 PF00486 Transcriptional regulatory protein, C terminal AM609_12735 PF13368 Topoisomerase C-terminal repeat AM609_12735 PF01131 DNA topoisomerase AM609_12735 PF01751 Toprim domain AM609_12750 PF00486 Transcriptional regulatory protein, C terminal AM609_12750 PF00072 Response regulator receiver domain AM609_12755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_12755 PF00512 His Kinase A (phospho-acceptor) domain AM609_12755 PF00672 HAMP domain AM609_12760 PF14310 Fibronectin type III-like domain AM609_12760 PF00933 Glycosyl hydrolase family 3 N terminal domain AM609_12760 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM609_12775 PF05175 Methyltransferase small domain AM609_12775 PF17827 PrmC N-terminal domain AM609_12790 PF07690 Major Facilitator Superfamily AM609_12805 PF00437 Type II/IV secretion system protein AM609_12810 PF10609 NUBPL iron-transfer P-loop NTPase AM609_12845 PF00561 alpha/beta hydrolase fold AM609_12850 PF00730 HhH-GPD superfamily base excision DNA repair protein AM609_12850 PF10576 Iron-sulfur binding domain of endonuclease III AM609_12850 PF00633 Helix-hairpin-helix motif AM609_12855 PF00027 Cyclic nucleotide-binding domain AM609_12855 PF13545 Crp-like helix-turn-helix domain AM609_12860 PF02467 Transcription factor WhiB AM609_12865 PF00905 Penicillin binding protein transpeptidase domain AM609_12865 PF00912 Transglycosylase AM609_12895 PF00781 Diacylglycerol kinase catalytic domain AM609_12915 PF01850 PIN domain AM609_12920 PF01658 Myo-inositol-1-phosphate synthase AM609_12950 PF00005 ABC transporter AM609_12970 PF08245 Mur ligase middle domain AM609_12970 PF08353 Domain of unknown function (DUF1727) AM609_12975 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM609_12980 PF00293 NUDIX domain AM609_13000 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM609_13010 PF03900 Porphobilinogen deaminase, C-terminal domain AM609_13010 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM609_13015 PF00490 Delta-aminolevulinic acid dehydratase AM609_13025 PF00202 Aminotransferase class-III AM609_13030 PF02378 Phosphotransferase system, EIIC AM609_13030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM609_13030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM609_13045 PF00232 Glycosyl hydrolase family 1 AM609_13070 PF01661 Macro domain AM609_13075 PF00210 Ferritin-like domain AM609_13080 PF00005 ABC transporter AM609_13100 PF00196 Bacterial regulatory proteins, luxR family AM609_13100 PF00072 Response regulator receiver domain AM609_13105 PF00085 Thioredoxin AM609_13115 PF01418 Helix-turn-helix domain, rpiR family AM609_13115 PF01380 SIS domain AM609_13120 PF03949 Malic enzyme, NAD binding domain AM609_13120 PF00390 Malic enzyme, N-terminal domain AM609_13140 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM609_13140 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM609_13145 PF13840 ACT domain AM609_13145 PF00696 Amino acid kinase family AM609_13145 PF01842 ACT domain AM609_13170 PF00005 ABC transporter AM609_13190 PF02132 RecR protein AM609_13190 PF13662 Toprim domain AM609_13195 PF12169 DNA polymerase III subunits gamma and tau domain III AM609_13235 PF08450 SMP-30/Gluconolactonase/LRE-like region AM609_13245 PF00274 Fructose-bisphosphate aldolase class-I AM609_13250 PF00356 Bacterial regulatory proteins, lacI family AM609_13255 PF00703 Glycosyl hydrolases family 2 AM609_13255 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM609_13255 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM609_13255 PF16353 Domain of unknown function(DUF4981) AM609_13255 PF02929 Beta galactosidase small chain AM609_13300 PF01042 Endoribonuclease L-PSP AM609_13310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM609_13310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM609_13310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM609_13310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM609_13335 PF01850 PIN domain AM609_13360 PF00155 Aminotransferase class I and II AM609_13380 PF03848 Tellurite resistance protein TehB AM609_13390 PF03051 Peptidase C1-like family AM609_13405 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AM609_13410 PF08328 Adenylosuccinate lyase C-terminal AM609_13410 PF00206 Lyase AM609_13420 PF02583 Metal-sensitive transcriptional repressor AM609_13425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM609_13425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM609_13425 PF00403 Heavy-metal-associated domain AM609_13430 PF00403 Heavy-metal-associated domain AM609_13455 PF00367 phosphotransferase system, EIIB AM609_13455 PF02378 Phosphotransferase system, EIIC AM609_13460 PF13580 SIS domain AM609_13470 PF01418 Helix-turn-helix domain, rpiR family AM609_13470 PF01380 SIS domain AM609_13475 PF00268 Ribonucleotide reductase, small chain AM609_13510 PF00083 Sugar (and other) transporter AM609_13520 PF01121 Dephospho-CoA kinase AM609_13535 PF02867 Ribonucleotide reductase, barrel domain AM609_13535 PF08343 Ribonucleotide reductase N-terminal AM609_13535 PF00317 Ribonucleotide reductase, all-alpha domain AM609_13540 PF07972 NrdI Flavodoxin like AM609_13575 PF00128 Alpha amylase, catalytic domain AM609_13585 PF13657 HipA N-terminal domain AM609_13585 PF07804 HipA-like C-terminal domain AM609_13590 PF03313 Serine dehydratase alpha chain AM609_13590 PF03315 Serine dehydratase beta chain AM609_13605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM609_13610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM609_13615 PF00324 Amino acid permease AM609_13630 PF13462 Thioredoxin AM609_13630 PF06965 Na+/H+ antiporter 1 AM609_13725 PF12538 DNA transporter AM609_13725 PF01580 FtsK/SpoIIIE family AM609_13770 PF00437 Type II/IV secretion system protein AM609_13860 PF01594 AI-2E family transporter AM609_13870 PF00072 Response regulator receiver domain AM609_13870 PF00196 Bacterial regulatory proteins, luxR family AM609_13915 PF12704 MacB-like periplasmic core domain AM609_13915 PF02687 FtsX-like permease family AM609_13915 PF00005 ABC transporter AM609_13925 PF13784 Fic/DOC family N-terminal AM609_13925 PF02661 Fic/DOC family AM609_13935 PF00072 Response regulator receiver domain AM609_13935 PF00196 Bacterial regulatory proteins, luxR family AM609_13950 PF00005 ABC transporter AM609_13950 PF02687 FtsX-like permease family AM609_13950 PF12704 MacB-like periplasmic core domain AM609_13960 PF00005 ABC transporter AM609_13960 PF02687 FtsX-like permease family AM609_13960 PF12704 MacB-like periplasmic core domain AM609_13975 PF07690 Major Facilitator Superfamily AM609_14010 PF00939 Sodium:sulfate symporter transmembrane region AM609_14025 PF02664 S-Ribosylhomocysteinase (LuxS) AM609_14040 PF12146 Serine aminopeptidase, S33 AM609_14045 PF01048 Phosphorylase superfamily AM609_14050 PF02463 RecF/RecN/SMC N terminal domain AM609_14075 PF01910 Thiamine-binding protein AM609_14080 PF00156 Phosphoribosyl transferase domain AM609_14085 PF13340 Putative transposase of IS4/5 family (DUF4096) AM609_14100 PF12401 Protein of unknown function (DUF2662) AM609_14100 PF00498 FHA domain AM609_14105 PF16697 Inner membrane component of T3SS, cytoplasmic domain AM609_14120 PF00905 Penicillin binding protein transpeptidase domain AM609_14125 PF00069 Protein kinase domain AM609_14130 PF00069 Protein kinase domain AM609_14130 PF03793 PASTA domain AM609_14140 PF04203 Sortase domain AM609_14145 PF06781 Cell division protein CrgA AM609_14155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM609_14175 PF12089 Transmembrane domain of unknown function (DUF3566) AM609_14185 PF00204 DNA gyrase B AM609_14185 PF00986 DNA gyrase B subunit, carboxyl terminus AM609_14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_14185 PF01751 Toprim domain AM609_14195 PF02463 RecF/RecN/SMC N terminal domain AM609_14200 PF00712 DNA polymerase III beta subunit, N-terminal domain AM609_14200 PF02768 DNA polymerase III beta subunit, C-terminal domain AM609_14200 PF02767 DNA polymerase III beta subunit, central domain AM609_14205 PF00308 Bacterial dnaA protein AM609_14205 PF08299 Bacterial dnaA protein helix-turn-helix AM609_14210 PF00468 Ribosomal protein L34 AM609_14215 PF00825 Ribonuclease P AM609_14220 PF01809 Putative membrane protein insertion efficiency factor AM609_14225 PF02096 60Kd inner membrane protein AM609_14235 PF02527 rRNA small subunit methyltransferase G AM609_14240 PF13614 AAA domain AM609_14245 PF02195 ParB-like nuclease domain AM609_14245 PF17762 HTH domain found in ParB protein AM609_14255 PF01820 D-ala D-ala ligase N-terminus AM609_14255 PF07478 D-ala D-ala ligase C-terminus AM609_14260 PF00155 Aminotransferase class I and II AM609_14265 PF00291 Pyridoxal-phosphate dependent enzyme AM609_14265 PF14821 Threonine synthase N terminus AM609_14270 PF12464 Maltose acetyltransferase AM609_14270 PF14602 Hexapeptide repeat of succinyl-transferase AM609_14275 PF00085 Thioredoxin AM609_14290 PF03023 Lipid II flippase MurJ AM609_14300 PF00293 NUDIX domain AM609_14305 PF12627 Probable RNA and SrmB- binding site of polymerase A AM609_14305 PF01743 Poly A polymerase head domain AM609_14305 PF13735 tRNA nucleotidyltransferase domain 2 putative AM609_14380 PF00196 Bacterial regulatory proteins, luxR family AM609_14380 PF00072 Response regulator receiver domain AM609_14385 PF13185 GAF domain AM609_14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_14385 PF07730 Histidine kinase AM609_14390 PF00266 Aminotransferase class-V AM609_14395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM609_14395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM609_14415 PF00005 ABC transporter AM609_14450 PF07690 Major Facilitator Superfamily AM609_14460 PF07739 TipAS antibiotic-recognition domain AM609_14460 PF13411 MerR HTH family regulatory protein AM609_14465 PF00690 Cation transporter/ATPase, N-terminus AM609_14465 PF00689 Cation transporting ATPase, C-terminus AM609_14475 PF00912 Transglycosylase AM609_14475 PF17092 Penicillin-binding protein OB-like domain AM609_14475 PF00905 Penicillin binding protein transpeptidase domain AM609_14480 PF01250 Ribosomal protein S6 AM609_14485 PF00436 Single-strand binding protein family AM609_14490 PF01084 Ribosomal protein S18 AM609_14495 PF03948 Ribosomal protein L9, C-terminal domain AM609_14495 PF01281 Ribosomal protein L9, N-terminal domain AM609_14510 PF00196 Bacterial regulatory proteins, luxR family AM609_14510 PF00072 Response regulator receiver domain AM609_14515 PF01554 MatE AM609_14520 PF03796 DnaB-like helicase C terminal domain AM609_14520 PF00772 DnaB-like helicase N terminal domain AM609_14525 PF02661 Fic/DOC family AM609_14525 PF12728 Helix-turn-helix domain AM609_14535 PF00324 Amino acid permease AM609_14550 PF00005 ABC transporter AM609_14565 PF00270 DEAD/DEAH box helicase AM609_14565 PF17191 RecG wedge domain AM609_14565 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AM609_14570 PF08543 Phosphomethylpyrimidine kinase AM609_14590 PF00128 Alpha amylase, catalytic domain AM609_14605 PF01061 ABC-2 type transporter AM609_14605 PF00498 FHA domain AM609_14605 PF00005 ABC transporter AM609_14615 PF04151 Bacterial pre-peptidase C-terminal domain AM609_14615 PF00082 Subtilase family AM609_14620 PF00459 Inositol monophosphatase family AM609_14625 PF00072 Response regulator receiver domain AM609_14625 PF00196 Bacterial regulatory proteins, luxR family AM609_14695 PF09383 NIL domain AM609_14695 PF00005 ABC transporter AM609_14705 PF03180 NLPA lipoprotein AM609_14720 PF01965 DJ-1/PfpI family AM609_14750 PF00072 Response regulator receiver domain AM609_14750 PF00196 Bacterial regulatory proteins, luxR family AM609_14765 PF00132 Bacterial transferase hexapeptide (six repeats) AM609_14765 PF12464 Maltose acetyltransferase AM609_14790 PF01119 DNA mismatch repair protein, C-terminal domain AM609_14790 PF08676 MutL C terminal dimerisation domain AM609_14830 PF00872 Transposase, Mutator family AM609_14840 PF00860 Permease family AM609_14855 PF02146 Sir2 family AM609_14900 PF12464 Maltose acetyltransferase AM609_14900 PF00132 Bacterial transferase hexapeptide (six repeats) AM609_14900 PF14602 Hexapeptide repeat of succinyl-transferase AM609_14905 PF14437 MafB19-like deaminase AM609_14905 PF11734 TilS substrate C-terminal domain AM609_14905 PF01171 PP-loop family AM609_14910 PF02028 BCCT, betaine/carnitine/choline family transporter AM609_14920 PF02687 FtsX-like permease family AM609_14920 PF00005 ABC transporter AM609_14920 PF12704 MacB-like periplasmic core domain AM609_14925 PF17200 Single Cache domain 2 AM609_14925 PF07730 Histidine kinase AM609_14940 PF01842 ACT domain AM609_14940 PF00800 Prephenate dehydratase AM609_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM609_14950 PF03466 LysR substrate binding domain AM609_14955 PF02403 Seryl-tRNA synthetase N-terminal domain AM609_14955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM609_14965 PF01547 Bacterial extracellular solute-binding protein AM609_14995 PF00478 IMP dehydrogenase / GMP reductase domain AM609_14995 PF00571 CBS domain AM609_15000 PF12697 Alpha/beta hydrolase family AM609_15005 PF03621 MbtH-like protein AM609_15010 PF00550 Phosphopantetheine attachment site AM609_15010 PF00668 Condensation domain AM609_15010 PF13193 AMP-binding enzyme C-terminal domain AM609_15010 PF00501 AMP-binding enzyme AM609_15015 PF00550 Phosphopantetheine attachment site AM609_15015 PF00668 Condensation domain AM609_15015 PF13193 AMP-binding enzyme C-terminal domain AM609_15015 PF07993 Male sterility protein AM609_15015 PF00501 AMP-binding enzyme AM609_15020 PF00501 AMP-binding enzyme AM609_15020 PF00550 Phosphopantetheine attachment site AM609_15020 PF00668 Condensation domain AM609_15020 PF13193 AMP-binding enzyme C-terminal domain AM609_15025 PF00975 Thioesterase domain AM609_15045 PF00155 Aminotransferase class I and II AM609_15050 PF00664 ABC transporter transmembrane region AM609_15050 PF00005 ABC transporter AM609_15055 PF00664 ABC transporter transmembrane region AM609_15055 PF00005 ABC transporter AM609_15060 PF00294 pfkB family carbohydrate kinase AM609_15070 PF00440 Bacterial regulatory proteins, tetR family AM609_15070 PF13305 Tetracyclin repressor-like, C-terminal domain AM609_15080 PF00005 ABC transporter AM609_15085 PF18494 Pullulanase Ins domain AM609_15085 PF11852 Domain of unknown function (DUF3372) AM609_15085 PF03714 Bacterial pullanase-associated domain AM609_15085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM609_15085 PF17967 Pullulanase N2 domain AM609_15095 PF04343 Protein of unknown function, DUF488 AM609_15100 PF00004 ATPase family associated with various cellular activities (AAA) AM609_15100 PF12002 MgsA AAA+ ATPase C terminal AM609_15100 PF16193 AAA C-terminal domain AM609_15105 PF00480 ROK family AM609_15110 PF13419 Haloacid dehalogenase-like hydrolase AM609_15175 PF00005 ABC transporter AM609_15175 PF13732 Domain of unknown function (DUF4162) AM609_15190 PF03167 Uracil DNA glycosylase superfamily AM609_15195 PF00072 Response regulator receiver domain AM609_15195 PF00196 Bacterial regulatory proteins, luxR family AM609_15200 PF07730 Histidine kinase AM609_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM609_15205 PF00196 Bacterial regulatory proteins, luxR family AM609_15205 PF00072 Response regulator receiver domain AM609_15210 PF17967 Pullulanase N2 domain AM609_15210 PF03714 Bacterial pullanase-associated domain AM609_15210 PF18494 Pullulanase Ins domain AM609_15210 PF11852 Domain of unknown function (DUF3372) AM609_15210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM609_15220 PF06736 Protein of unknown function (DUF1211) AM609_15225 PF02754 Cysteine-rich domain AM609_15225 PF13183 4Fe-4S dicluster domain AM609_15225 PF02665 Nitrate reductase gamma subunit AM609_15240 PF02223 Thymidylate kinase AM609_15245 PF09115 DNA polymerase III, delta subunit, C terminal AM609_15260 PF00561 alpha/beta hydrolase fold AM609_15265 PF00710 Asparaginase, N-terminal AM609_15265 PF17763 Glutaminase/Asparaginase C-terminal domain AM609_15275 PF11774 Lsr2 AM609_15280 PF00300 Histidine phosphatase superfamily (branch 1) AM609_15285 PF01895 PhoU domain AM609_15295 PF00486 Transcriptional regulatory protein, C terminal AM609_15295 PF00072 Response regulator receiver domain AM609_15300 PF02559 CarD-like/TRCF domain AM609_15305 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM609_15320 PF03176 MMPL family