locus-tag class description AMIS_10 PF08299 Bacterial dnaA protein helix-turn-helix AMIS_10 PF00308 Bacterial dnaA protein AMIS_100 PF12089 Transmembrane domain of unknown function (DUF3566) AMIS_10010 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_10020 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_10040 PF08532 Beta-galactosidase trimerisation domain AMIS_10040 PF02449 Beta-galactosidase AMIS_10040 PF08533 Beta-galactosidase C-terminal domain AMIS_10050 PF01965 DJ-1/PfpI family AMIS_10070 PF01565 FAD binding domain AMIS_10070 PF04030 D-arabinono-1,4-lactone oxidase AMIS_10090 PF00072 Response regulator receiver domain AMIS_10090 PF00486 Transcriptional regulatory protein, C terminal AMIS_10100 PF03707 Bacterial signalling protein N terminal repeat AMIS_10100 PF00990 Diguanylate cyclase, GGDEF domain AMIS_10100 PF00563 EAL domain AMIS_10140 PF01544 CorA-like Mg2+ transporter protein AMIS_10160 PF00005 ABC transporter AMIS_10160 PF13732 Domain of unknown function (DUF4162) AMIS_10180 PF00583 Acetyltransferase (GNAT) family AMIS_10190 PF00583 Acetyltransferase (GNAT) family AMIS_10200 PF00728 Glycosyl hydrolase family 20, catalytic domain AMIS_10200 PF02838 Glycosyl hydrolase family 20, domain 2 AMIS_10210 PF00067 Cytochrome P450 AMIS_1030 PF01116 Fructose-bisphosphate aldolase class-II AMIS_10300 PF00356 Bacterial regulatory proteins, lacI family AMIS_10320 PF10282 Lactonase, 7-bladed beta-propeller AMIS_10340 PF00480 ROK family AMIS_10350 PF01261 Xylose isomerase-like TIM barrel AMIS_10360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_10360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_10370 PF01095 Pectinesterase AMIS_10380 PF00544 Pectate lyase AMIS_10400 PF00534 Glycosyl transferases group 1 AMIS_10400 PF13579 Glycosyl transferase 4-like domain AMIS_10420 PF00128 Alpha amylase, catalytic domain AMIS_10430 PF13291 ACT domain AMIS_10430 PF02824 TGS domain AMIS_10430 PF04607 Region found in RelA / SpoT proteins AMIS_10440 PF00990 Diguanylate cyclase, GGDEF domain AMIS_10440 PF03707 Bacterial signalling protein N terminal repeat AMIS_10440 PF00563 EAL domain AMIS_10490 PF02223 Thymidylate kinase AMIS_10510 PF04542 Sigma-70 region 2 AMIS_10510 PF04545 Sigma-70, region 4 AMIS_10510 PF00140 Sigma-70 factor, region 1.2 AMIS_10510 PF04539 Sigma-70 region 3 AMIS_10520 PF00877 NlpC/P60 family AMIS_10520 PF08239 Bacterial SH3 domain AMIS_10520 PF01476 LysM domain AMIS_10530 PF12823 Domain of unknown function (DUF3817) AMIS_10590 PF03992 Antibiotic biosynthesis monooxygenase AMIS_10600 PF07690 Major Facilitator Superfamily AMIS_10640 PF00196 Bacterial regulatory proteins, luxR family AMIS_10640 PF00072 Response regulator receiver domain AMIS_10670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIS_10670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIS_10710 PF00436 Single-strand binding protein family AMIS_10730 PF03186 CobD/Cbib protein AMIS_10740 PF01022 Bacterial regulatory protein, arsR family AMIS_10750 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIS_10750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_10760 PF01435 Peptidase family M48 AMIS_10770 PF01546 Peptidase family M20/M25/M40 AMIS_10770 PF07687 Peptidase dimerisation domain AMIS_10780 PF01494 FAD binding domain AMIS_10800 PF04679 ATP dependent DNA ligase C terminal region AMIS_10800 PF04675 DNA ligase N terminus AMIS_10800 PF01068 ATP dependent DNA ligase domain AMIS_10830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_10830 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIS_10850 PF00912 Transglycosylase AMIS_10850 PF00905 Penicillin binding protein transpeptidase domain AMIS_10850 PF17092 Penicillin-binding protein OB-like domain AMIS_10860 PF00155 Aminotransferase class I and II AMIS_10870 PF02277 Phosphoribosyltransferase AMIS_10880 PF10414 Sirohaem synthase dimerisation region AMIS_10880 PF14824 Sirohaem biosynthesis protein central AMIS_10880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIS_10890 PF00982 Glycosyltransferase family 20 AMIS_10910 PF00005 ABC transporter AMIS_10910 PF12848 ABC transporter AMIS_10960 PF01152 Bacterial-like globin AMIS_10980 PF00924 Mechanosensitive ion channel AMIS_11030 PF17174 Domain of unknown function (DUF5130) AMIS_11050 PF01433 Peptidase family M1 domain AMIS_11050 PF11838 ERAP1-like C-terminal domain AMIS_11060 PF01323 DSBA-like thioredoxin domain AMIS_11090 PF07859 alpha/beta hydrolase fold AMIS_1110 PF00709 Adenylosuccinate synthetase AMIS_11100 PF02502 Ribose/Galactose Isomerase AMIS_11130 PF13530 Sterol carrier protein domain AMIS_11130 PF17668 Acetyltransferase (GNAT) domain AMIS_11190 PF01022 Bacterial regulatory protein, arsR family AMIS_1120 PF02844 Phosphoribosylglycinamide synthetase, N domain AMIS_1120 PF02843 Phosphoribosylglycinamide synthetase, C domain AMIS_1120 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMIS_11220 PF05698 Bacterial trigger factor protein (TF) C-terminus AMIS_11220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIS_11220 PF05697 Bacterial trigger factor protein (TF) AMIS_11230 PF00574 Clp protease AMIS_11240 PF00574 Clp protease AMIS_11250 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_11250 PF07724 AAA domain (Cdc48 subfamily) AMIS_11250 PF06689 ClpX C4-type zinc finger AMIS_11260 PF00795 Carbon-nitrogen hydrolase AMIS_11290 PF10458 Valyl tRNA synthetase tRNA binding arm AMIS_11290 PF08264 Anticodon-binding domain of tRNA AMIS_11290 PF00133 tRNA synthetases class I (I, L, M and V) AMIS_11300 PF08245 Mur ligase middle domain AMIS_11300 PF02875 Mur ligase family, glutamate ligase domain AMIS_11330 PF00334 Nucleoside diphosphate kinase AMIS_11340 PF00989 PAS fold AMIS_11340 PF00672 HAMP domain AMIS_11340 PF00512 His Kinase A (phospho-acceptor) domain AMIS_11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_11350 PF00133 tRNA synthetases class I (I, L, M and V) AMIS_11350 PF08264 Anticodon-binding domain of tRNA AMIS_11380 PF12697 Alpha/beta hydrolase family AMIS_11400 PF01740 STAS domain AMIS_11430 PF10150 Ribonuclease E/G family AMIS_11440 PF00829 Ribosomal prokaryotic L21 protein AMIS_11450 PF01016 Ribosomal L27 protein AMIS_11460 PF01926 50S ribosome-binding GTPase AMIS_11460 PF01018 GTP1/OBG AMIS_11460 PF09269 Domain of unknown function (DUF1967) AMIS_11470 PF13673 Acetyltransferase (GNAT) domain AMIS_11480 PF00579 tRNA synthetases class I (W and Y) AMIS_11490 PF01433 Peptidase family M1 domain AMIS_11490 PF11838 ERAP1-like C-terminal domain AMIS_1150 PF00206 Lyase AMIS_1150 PF10397 Adenylosuccinate lyase C-terminus AMIS_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_11500 PF00512 His Kinase A (phospho-acceptor) domain AMIS_11500 PF08448 PAS fold AMIS_11500 PF00072 Response regulator receiver domain AMIS_11500 PF13188 PAS domain AMIS_11510 PF01467 Cytidylyltransferase-like AMIS_11530 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_11550 PF02645 Uncharacterised protein, DegV family COG1307 AMIS_11570 PF17827 PrmC N-terminal domain AMIS_11570 PF05175 Methyltransferase small domain AMIS_11590 PF13567 Domain of unknown function (DUF4131) AMIS_11590 PF03772 Competence protein AMIS_11590 PF00753 Metallo-beta-lactamase superfamily AMIS_11630 PF01649 Ribosomal protein S20 AMIS_11670 PF03144 Elongation factor Tu domain 2 AMIS_11670 PF00009 Elongation factor Tu GTP binding domain AMIS_11670 PF06421 GTP-binding protein LepA C-terminus AMIS_11670 PF00679 Elongation factor G C-terminus AMIS_11680 PF04226 Transglycosylase associated protein AMIS_1170 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMIS_11710 PF00378 Enoyl-CoA hydratase/isomerase AMIS_11720 PF04055 Radical SAM superfamily AMIS_11740 PF01628 HrcA protein C terminal domain AMIS_11750 PF01556 DnaJ C terminal domain AMIS_11750 PF00684 DnaJ central domain AMIS_11750 PF00226 DnaJ domain AMIS_11760 PF04452 RNA methyltransferase AMIS_11780 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_11780 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_11780 PF07691 PA14 domain AMIS_11780 PF14310 Fibronectin type III-like domain AMIS_11790 PF01230 HIT domain AMIS_11800 PF00144 Beta-lactamase AMIS_11810 PF02562 PhoH-like protein AMIS_11820 PF02130 Uncharacterized protein family UPF0054 AMIS_11830 PF01595 Cyclin M transmembrane N-terminal domain AMIS_11830 PF03471 Transporter associated domain AMIS_11830 PF00571 CBS domain AMIS_11850 PF01926 50S ribosome-binding GTPase AMIS_11850 PF07650 KH domain AMIS_11880 PF02565 Recombination protein O C terminal AMIS_11880 PF11967 Recombination protein O N terminal AMIS_11890 PF01255 Putative undecaprenyl diphosphate synthase AMIS_1190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMIS_1190 PF02769 AIR synthase related protein, C-terminal domain AMIS_1190 PF00586 AIR synthase related protein, N-terminal domain AMIS_11920 PF01910 Thiamine-binding protein AMIS_11970 PF00005 ABC transporter AMIS_11980 PF09819 ABC-type cobalt transport system, permease component AMIS_11990 PF00561 alpha/beta hydrolase fold AMIS_12020 PF01475 Ferric uptake regulator family AMIS_12030 PF01022 Bacterial regulatory protein, arsR family AMIS_12040 PF00950 ABC 3 transport family AMIS_12050 PF00005 ABC transporter AMIS_12060 PF01297 Zinc-uptake complex component A periplasmic AMIS_12060 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AMIS_12100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIS_12100 PF03129 Anticodon binding domain AMIS_12110 PF02625 XdhC and CoxI family AMIS_12110 PF13478 XdhC Rossmann domain AMIS_12120 PF01207 Dihydrouridine synthase (Dus) AMIS_12140 PF07730 Histidine kinase AMIS_12140 PF17200 Single Cache domain 2 AMIS_12150 PF00196 Bacterial regulatory proteins, luxR family AMIS_12150 PF00072 Response regulator receiver domain AMIS_12190 PF03259 Roadblock/LC7 domain AMIS_1220 PF00156 Phosphoribosyl transferase domain AMIS_12230 PF13286 Phosphohydrolase-associated domain AMIS_12230 PF01966 HD domain AMIS_12240 PF08278 DNA primase DnaG DnaB-binding AMIS_12240 PF08275 DNA primase catalytic core, N-terminal domain AMIS_12240 PF13662 Toprim domain AMIS_12240 PF01807 CHC2 zinc finger AMIS_12240 PF10410 DnaB-helicase binding domain of primase AMIS_12260 PF00005 ABC transporter AMIS_12290 PF03631 Virulence factor BrkB AMIS_1230 PF00586 AIR synthase related protein, N-terminal domain AMIS_1230 PF02769 AIR synthase related protein, C-terminal domain AMIS_12300 PF00480 ROK family AMIS_12310 PF00005 ABC transporter AMIS_12320 PF02653 Branched-chain amino acid transport system / permease component AMIS_12340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_12340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_12380 PF01593 Flavin containing amine oxidoreductase AMIS_1240 PF04055 Radical SAM superfamily AMIS_12420 PF06826 Predicted Permease Membrane Region AMIS_12420 PF02080 TrkA-C domain AMIS_12420 PF02080 TrkA-C domain AMIS_12420 PF06826 Predicted Permease Membrane Region AMIS_12430 PF00230 Major intrinsic protein AMIS_12510 PF00326 Prolyl oligopeptidase family AMIS_12510 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMIS_12610 PF01266 FAD dependent oxidoreductase AMIS_12610 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMIS_12620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_12620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_12630 PF09339 IclR helix-turn-helix domain AMIS_12630 PF01614 Bacterial transcriptional regulator AMIS_12640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_12640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_12650 PF01433 Peptidase family M1 domain AMIS_12650 PF11838 ERAP1-like C-terminal domain AMIS_12660 PF00756 Putative esterase AMIS_12660 PF00331 Glycosyl hydrolase family 10 AMIS_12670 PF01522 Polysaccharide deacetylase AMIS_12680 PF02839 Carbohydrate binding domain AMIS_1270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMIS_1270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMIS_12720 PF10145 Phage-related minor tail protein AMIS_12720 PF01464 Transglycosylase SLT domain AMIS_12720 PF01551 Peptidase family M23 AMIS_12880 PF05977 Transmembrane secretion effector AMIS_12890 PF00750 tRNA synthetases class I (R) AMIS_12890 PF05746 DALR anticodon binding domain AMIS_12890 PF03485 Arginyl tRNA synthetase N terminal domain AMIS_12900 PF02872 5'-nucleotidase, C-terminal domain AMIS_12900 PF00149 Calcineurin-like phosphoesterase AMIS_12920 PF00069 Protein kinase domain AMIS_12950 PF01975 Survival protein SurE AMIS_12960 PF00294 pfkB family carbohydrate kinase AMIS_12960 PF01467 Cytidylyltransferase-like AMIS_12980 PF01545 Cation efflux family AMIS_130 PF00293 NUDIX domain AMIS_130 PF09297 NADH pyrophosphatase zinc ribbon domain AMIS_13000 PF13538 UvrD-like helicase C-terminal domain AMIS_13050 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_13050 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_13060 PF01039 Carboxyl transferase domain AMIS_13070 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_13070 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_13080 PF00550 Phosphopantetheine attachment site AMIS_13090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIS_13090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIS_1310 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMIS_13100 PF00698 Acyl transferase domain AMIS_13110 PF17853 GGDEF-like domain AMIS_13110 PF13556 PucR C-terminal helix-turn-helix domain AMIS_13150 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMIS_13160 PF02743 Cache domain AMIS_13160 PF00672 HAMP domain AMIS_13160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_13170 PF17831 Pyruvate dehydrogenase E1 component middle domain AMIS_13170 PF00456 Transketolase, thiamine diphosphate binding domain AMIS_13180 PF01894 Uncharacterised protein family UPF0047 AMIS_13190 PF02780 Transketolase, C-terminal domain AMIS_13190 PF02779 Transketolase, pyrimidine binding domain AMIS_13200 PF11253 Protein of unknown function (DUF3052) AMIS_13210 PF00578 AhpC/TSA family AMIS_13220 PF04167 Protein of unknown function (DUF402) AMIS_13270 PF01784 NIF3 (NGG1p interacting factor 3) AMIS_13290 PF13456 Reverse transcriptase-like AMIS_13290 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_13300 PF00553 Cellulose binding domain AMIS_13300 PF00041 Fibronectin type III domain AMIS_13300 PF00704 Glycosyl hydrolases family 18 AMIS_13320 PF00474 Sodium:solute symporter family AMIS_13360 PF00925 GTP cyclohydrolase II AMIS_13380 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_13380 PF13291 ACT domain AMIS_13400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMIS_13400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIS_13420 PF01925 Sulfite exporter TauE/SafE AMIS_13430 PF01209 ubiE/COQ5 methyltransferase family AMIS_13440 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIS_13440 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMIS_13470 PF00773 RNB domain AMIS_13470 PF17876 Cold shock domain AMIS_13470 PF00575 S1 RNA binding domain AMIS_13470 PF08206 Ribonuclease B OB domain AMIS_13480 PF02548 Ketopantoate hydroxymethyltransferase AMIS_13490 PF02540 NAD synthase AMIS_13490 PF00795 Carbon-nitrogen hydrolase AMIS_13500 PF03951 Glutamine synthetase, beta-Grasp domain AMIS_13500 PF00120 Glutamine synthetase, catalytic domain AMIS_13520 PF04542 Sigma-70 region 2 AMIS_13520 PF04545 Sigma-70, region 4 AMIS_13530 PF03994 Domain of Unknown Function (DUF350) AMIS_13540 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_13540 PF00107 Zinc-binding dehydrogenase AMIS_13560 PF08335 GlnD PII-uridylyltransferase AMIS_13560 PF03710 Glutamate-ammonia ligase adenylyltransferase AMIS_13580 PF01047 MarR family AMIS_13620 PF09594 Glycosyltransferase family 87 AMIS_13650 PF03951 Glutamine synthetase, beta-Grasp domain AMIS_13650 PF00120 Glutamine synthetase, catalytic domain AMIS_13710 PF00082 Subtilase family AMIS_13710 PF05922 Peptidase inhibitor I9 AMIS_13720 PF05108 Type VII secretion system ESX-1, transport TM domain B AMIS_13740 PF01580 FtsK/SpoIIIE family AMIS_13770 PF17866 AAA lid domain AMIS_13770 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_13780 PF13829 Domain of unknown function (DUF4191) AMIS_13800 PF00211 Adenylate and Guanylate cyclase catalytic domain AMIS_13800 PF13191 AAA ATPase domain AMIS_13820 PF04055 Radical SAM superfamily AMIS_13820 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMIS_13830 PF01336 OB-fold nucleic acid binding domain AMIS_13830 PF00152 tRNA synthetases class II (D, K and N) AMIS_13850 PF03099 Biotin/lipoate A/B protein ligase family AMIS_13870 PF01370 NAD dependent epimerase/dehydratase family AMIS_13870 PF08338 Domain of unknown function (DUF1731) AMIS_13880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIS_13880 PF00364 Biotin-requiring enzyme AMIS_13880 PF02817 e3 binding domain AMIS_13890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIS_13890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_13910 PF00883 Cytosol aminopeptidase family, catalytic domain AMIS_13910 PF02789 Cytosol aminopeptidase family, N-terminal domain AMIS_13920 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIS_13920 PF01571 Aminomethyltransferase folate-binding domain AMIS_13930 PF02654 Cobalamin-5-phosphate synthase AMIS_13940 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMIS_13970 PF00248 Aldo/keto reductase family AMIS_14020 PF00005 ABC transporter AMIS_14040 PF03591 AzlC protein AMIS_14070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIS_14080 PF02445 Quinolinate synthetase A protein AMIS_14090 PF02595 Glycerate kinase family AMIS_14100 PF01521 Iron-sulphur cluster biosynthesis AMIS_14110 PF00294 pfkB family carbohydrate kinase AMIS_14130 PF01206 Sulfurtransferase TusA AMIS_14140 PF00266 Aminotransferase class-V AMIS_14150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMIS_14160 PF12270 Cytochrome c oxidase subunit IV AMIS_14180 PF00591 Glycosyl transferase family, a/b domain AMIS_14180 PF02885 Glycosyl transferase family, helical bundle domain AMIS_1420 PF03061 Thioesterase superfamily AMIS_14200 PF05425 Copper resistance protein D AMIS_14200 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AMIS_14210 PF00510 Cytochrome c oxidase subunit III AMIS_14220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMIS_14220 PF00034 Cytochrome c AMIS_14230 PF00355 Rieske [2Fe-2S] domain AMIS_14240 PF13631 Cytochrome b(N-terminal)/b6/petB AMIS_14260 PF00483 Nucleotidyl transferase AMIS_14280 PF04607 Region found in RelA / SpoT proteins AMIS_14280 PF02824 TGS domain AMIS_14280 PF13291 ACT domain AMIS_14290 PF00929 Exonuclease AMIS_14290 PF01541 GIY-YIG catalytic domain AMIS_14320 PF01435 Peptidase family M48 AMIS_14320 PF16491 CAAX prenyl protease N-terminal, five membrane helices AMIS_14330 PF00534 Glycosyl transferases group 1 AMIS_14330 PF13439 Glycosyltransferase Family 4 AMIS_14340 PF00005 ABC transporter AMIS_14340 PF03412 Peptidase C39 family AMIS_14340 PF00664 ABC transporter transmembrane region AMIS_14380 PF00072 Response regulator receiver domain AMIS_14380 PF00196 Bacterial regulatory proteins, luxR family AMIS_14390 PF07730 Histidine kinase AMIS_14390 PF17200 Single Cache domain 2 AMIS_14420 PF00480 ROK family AMIS_14460 PF00982 Glycosyltransferase family 20 AMIS_14490 PF00027 Cyclic nucleotide-binding domain AMIS_14490 PF13545 Crp-like helix-turn-helix domain AMIS_1450 PF00293 NUDIX domain AMIS_14510 PF16473 3' exoribonuclease, RNase T-like AMIS_14520 PF00440 Bacterial regulatory proteins, tetR family AMIS_14530 PF07690 Major Facilitator Superfamily AMIS_14540 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_14560 PF01047 MarR family AMIS_14560 PF00480 ROK family AMIS_14580 PF00365 Phosphofructokinase AMIS_14590 PF03807 NADP oxidoreductase coenzyme F420-dependent AMIS_14590 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMIS_1460 PF01593 Flavin containing amine oxidoreductase AMIS_14610 PF01266 FAD dependent oxidoreductase AMIS_14680 PF00704 Glycosyl hydrolases family 18 AMIS_14680 PF00553 Cellulose binding domain AMIS_14680 PF00041 Fibronectin type III domain AMIS_14690 PF01474 Class-II DAHP synthetase family AMIS_14700 PF01212 Beta-eliminating lyase AMIS_14710 PF06418 CTP synthase N-terminus AMIS_14710 PF00117 Glutamine amidotransferase class-I AMIS_14720 PF03466 LysR substrate binding domain AMIS_14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_14730 PF01261 Xylose isomerase-like TIM barrel AMIS_14740 PF03793 PASTA domain AMIS_14740 PF00069 Protein kinase domain AMIS_14780 PF02219 Methylenetetrahydrofolate reductase AMIS_14820 PF17925 Tetracyclin repressor-like, C-terminal domain AMIS_14820 PF00440 Bacterial regulatory proteins, tetR family AMIS_14840 PF13085 2Fe-2S iron-sulfur cluster binding domain AMIS_14850 PF00890 FAD binding domain AMIS_14850 PF02910 Fumarate reductase flavoprotein C-term AMIS_14880 PF13649 Methyltransferase domain AMIS_1490 PF03441 FAD binding domain of DNA photolyase AMIS_1490 PF00875 DNA photolyase AMIS_14900 PF01593 Flavin containing amine oxidoreductase AMIS_14950 PF03129 Anticodon binding domain AMIS_14950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIS_14950 PF04073 Aminoacyl-tRNA editing domain AMIS_14960 PF00106 short chain dehydrogenase AMIS_1500 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_1500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIS_15010 PF11798 IMS family HHH motif AMIS_15010 PF00817 impB/mucB/samB family AMIS_15010 PF11799 impB/mucB/samB family C-terminal domain AMIS_15020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMIS_15020 PF14579 Helix-hairpin-helix motif AMIS_15020 PF02811 PHP domain AMIS_15020 PF01336 OB-fold nucleic acid binding domain AMIS_15020 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMIS_15070 PF13559 Domain of unknown function (DUF4129) AMIS_15070 PF01841 Transglutaminase-like superfamily AMIS_15070 PF11992 Domain of unknown function (DUF3488) AMIS_15090 PF07726 ATPase family associated with various cellular activities (AAA) AMIS_15090 PF17863 AAA lid domain AMIS_15100 PF09334 tRNA synthetases class I (M) AMIS_15100 PF13603 Leucyl-tRNA synthetase, Domain 2 AMIS_15100 PF08264 Anticodon-binding domain of tRNA AMIS_15120 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIS_15130 PF01225 Mur ligase family, catalytic domain AMIS_15130 PF08245 Mur ligase middle domain AMIS_15130 PF02875 Mur ligase family, glutamate ligase domain AMIS_15140 PF00877 NlpC/P60 family AMIS_15140 PF08239 Bacterial SH3 domain AMIS_15140 PF01476 LysM domain AMIS_15150 PF02381 MraZ protein, putative antitoxin-like AMIS_15160 PF01795 MraW methylase family AMIS_15180 PF00905 Penicillin binding protein transpeptidase domain AMIS_15180 PF03717 Penicillin-binding Protein dimerisation domain AMIS_15190 PF01225 Mur ligase family, catalytic domain AMIS_15190 PF08245 Mur ligase middle domain AMIS_15190 PF02875 Mur ligase family, glutamate ligase domain AMIS_15200 PF08245 Mur ligase middle domain AMIS_15200 PF01225 Mur ligase family, catalytic domain AMIS_15200 PF02875 Mur ligase family, glutamate ligase domain AMIS_15210 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMIS_15210 PF00953 Glycosyl transferase family 4 AMIS_15220 PF01098 Cell cycle protein AMIS_15230 PF04101 Glycosyltransferase family 28 C-terminal domain AMIS_15230 PF03033 Glycosyltransferase family 28 N-terminal domain AMIS_15240 PF08245 Mur ligase middle domain AMIS_15240 PF02875 Mur ligase family, glutamate ligase domain AMIS_15240 PF01225 Mur ligase family, catalytic domain AMIS_15250 PF03799 Cell division protein FtsQ AMIS_15250 PF08478 POTRA domain, FtsQ-type AMIS_15260 PF12327 FtsZ family, C-terminal domain AMIS_15260 PF00091 Tubulin/FtsZ family, GTPase domain AMIS_15270 PF01168 Alanine racemase, N-terminal domain AMIS_15280 PF04472 Cell division protein SepF AMIS_15300 PF05103 DivIVA protein AMIS_15340 PF01252 Signal peptidase (SPase) II AMIS_15350 PF00849 RNA pseudouridylate synthase AMIS_15380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMIS_15380 PF14579 Helix-hairpin-helix motif AMIS_15380 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMIS_15380 PF02811 PHP domain AMIS_15400 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMIS_15400 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIS_15400 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_15410 PF00815 Histidinol dehydrogenase AMIS_15420 PF00155 Aminotransferase class I and II AMIS_15430 PF00475 Imidazoleglycerol-phosphate dehydratase AMIS_15450 PF00117 Glutamine amidotransferase class-I AMIS_15470 PF00977 Histidine biosynthesis protein AMIS_15480 PF03466 LysR substrate binding domain AMIS_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_15490 PF00892 EamA-like transporter family AMIS_15500 PF00977 Histidine biosynthesis protein AMIS_15530 PF00155 Aminotransferase class I and II AMIS_15540 PF00501 AMP-binding enzyme AMIS_15560 PF00005 ABC transporter AMIS_15560 PF00664 ABC transporter transmembrane region AMIS_15570 PF00005 ABC transporter AMIS_15570 PF00664 ABC transporter transmembrane region AMIS_15580 PF01479 S4 domain AMIS_15580 PF00163 Ribosomal protein S4/S9 N-terminal domain AMIS_1560 PF00534 Glycosyl transferases group 1 AMIS_1560 PF17101 Stealth protein CR1, conserved region 1 AMIS_1560 PF11380 Stealth protein CR2, conserved region 2 AMIS_1560 PF17102 Stealth protein CR3, conserved region 3 AMIS_1560 PF17103 Stealth protein CR4, conserved region 4 AMIS_15610 PF01502 Phosphoribosyl-AMP cyclohydrolase AMIS_15620 PF04715 Anthranilate synthase component I, N terminal region AMIS_15620 PF00425 chorismate binding enzyme AMIS_15650 PF00218 Indole-3-glycerol phosphate synthase AMIS_15660 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_15670 PF00290 Tryptophan synthase alpha chain AMIS_15680 PF01790 Prolipoprotein diacylglyceryl transferase AMIS_15690 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMIS_15690 PF01266 FAD dependent oxidoreductase AMIS_15710 PF01493 GXGXG motif AMIS_15710 PF01645 Conserved region in glutamate synthase AMIS_15710 PF04898 Glutamate synthase central domain AMIS_15710 PF00310 Glutamine amidotransferases class-II AMIS_15720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_15720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMIS_15730 PF00224 Pyruvate kinase, barrel domain AMIS_15730 PF02887 Pyruvate kinase, alpha/beta domain AMIS_15760 PF03861 ANTAR domain AMIS_15760 PF00072 Response regulator receiver domain AMIS_15770 PF02653 Branched-chain amino acid transport system / permease component AMIS_15780 PF02653 Branched-chain amino acid transport system / permease component AMIS_15780 PF11862 Domain of unknown function (DUF3382) AMIS_15790 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIS_15790 PF00005 ABC transporter AMIS_15800 PF00005 ABC transporter AMIS_15820 PF00476 DNA polymerase family A AMIS_15820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMIS_15820 PF01367 5'-3' exonuclease, C-terminal SAM fold AMIS_15860 PF08241 Methyltransferase domain AMIS_15870 PF00575 S1 RNA binding domain AMIS_15880 PF04229 GrpB protein AMIS_15880 PF01121 Dephospho-CoA kinase AMIS_15890 PF04851 Type III restriction enzyme, res subunit AMIS_15890 PF00271 Helicase conserved C-terminal domain AMIS_15890 PF17757 UvrB interaction domain AMIS_15890 PF02151 UvrB/uvrC motif AMIS_15890 PF12344 Ultra-violet resistance protein B AMIS_1590 PF17101 Stealth protein CR1, conserved region 1 AMIS_1590 PF17102 Stealth protein CR3, conserved region 3 AMIS_1590 PF17103 Stealth protein CR4, conserved region 4 AMIS_1590 PF11380 Stealth protein CR2, conserved region 2 AMIS_15900 PF03992 Antibiotic biosynthesis monooxygenase AMIS_15910 PF03741 Integral membrane protein TerC family AMIS_15940 PF03946 Ribosomal protein L11, N-terminal domain AMIS_15940 PF00298 Ribosomal protein L11, RNA binding domain AMIS_15950 PF00574 Clp protease AMIS_160 PF01323 DSBA-like thioredoxin domain AMIS_16000 PF00753 Metallo-beta-lactamase superfamily AMIS_16020 PF03193 RsgA GTPase AMIS_16040 PF00005 ABC transporter AMIS_16040 PF17760 UvrA interaction domain AMIS_16040 PF17755 UvrA DNA-binding domain AMIS_16060 PF08459 UvrC Helix-hairpin-helix N-terminal AMIS_16060 PF02151 UvrB/uvrC motif AMIS_16060 PF01541 GIY-YIG catalytic domain AMIS_16070 PF03668 P-loop ATPase protein family AMIS_16080 PF01933 Uncharacterised protein family UPF0052 AMIS_16090 PF02650 WhiA C-terminal HTH domain AMIS_16090 PF14527 WhiA LAGLIDADG-like domain AMIS_16090 PF10298 WhiA N-terminal LAGLIDADG-like domain AMIS_16100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMIS_16100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIS_16110 PF00162 Phosphoglycerate kinase AMIS_16120 PF00121 Triosephosphate isomerase AMIS_16130 PF03840 Preprotein translocase SecG subunit AMIS_16150 PF00583 Acetyltransferase (GNAT) family AMIS_16160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMIS_16180 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMIS_16180 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMIS_16190 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMIS_16200 PF02780 Transketolase, C-terminal domain AMIS_16200 PF00456 Transketolase, thiamine diphosphate binding domain AMIS_16200 PF02779 Transketolase, pyrimidine binding domain AMIS_16210 PF01040 UbiA prenyltransferase family AMIS_16240 PF02628 Cytochrome oxidase assembly protein AMIS_16260 PF01458 Uncharacterized protein family (UPF0051) AMIS_16270 PF01458 Uncharacterized protein family (UPF0051) AMIS_16290 PF00005 ABC transporter AMIS_16300 PF00266 Aminotransferase class-V AMIS_16310 PF01592 NifU-like N terminal domain AMIS_16320 PF01883 Iron-sulfur cluster assembly protein AMIS_16340 PF12697 Alpha/beta hydrolase family AMIS_16400 PF04228 Putative neutral zinc metallopeptidase AMIS_16410 PF00005 ABC transporter AMIS_16410 PF12848 ABC transporter AMIS_16430 PF00378 Enoyl-CoA hydratase/isomerase AMIS_16440 PF00005 ABC transporter AMIS_16440 PF00664 ABC transporter transmembrane region AMIS_16450 PF03167 Uracil DNA glycosylase superfamily AMIS_16470 PF00440 Bacterial regulatory proteins, tetR family AMIS_1650 PF01741 Large-conductance mechanosensitive channel, MscL AMIS_16500 PF10944 Protein of unknown function (DUF2630) AMIS_16520 PF00330 Aconitase family (aconitate hydratase) AMIS_16520 PF00694 Aconitase C-terminal domain AMIS_16540 PF18494 Pullulanase Ins domain AMIS_16540 PF03714 Bacterial pullanase-associated domain AMIS_16540 PF11852 Domain of unknown function (DUF3372) AMIS_16540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIS_16540 PF17967 Pullulanase N2 domain AMIS_16560 PF07859 alpha/beta hydrolase fold AMIS_16570 PF00931 NB-ARC domain AMIS_16570 PF03704 Bacterial transcriptional activator domain AMIS_16570 PF00486 Transcriptional regulatory protein, C terminal AMIS_16580 PF05195 Aminopeptidase P, N-terminal domain AMIS_16580 PF00557 Metallopeptidase family M24 AMIS_16600 PF00294 pfkB family carbohydrate kinase AMIS_16640 PF17863 AAA lid domain AMIS_16640 PF07726 ATPase family associated with various cellular activities (AAA) AMIS_16650 PF01882 Protein of unknown function DUF58 AMIS_16660 PF13519 von Willebrand factor type A domain AMIS_16660 PF07584 Aerotolerance regulator N-terminal AMIS_16670 PF00072 Response regulator receiver domain AMIS_16670 PF00196 Bacterial regulatory proteins, luxR family AMIS_16680 PF07730 Histidine kinase AMIS_1670 PF08678 Rsbr N terminal AMIS_1670 PF01740 STAS domain AMIS_16720 PF13344 Haloacid dehalogenase-like hydrolase AMIS_16730 PF13344 Haloacid dehalogenase-like hydrolase AMIS_16730 PF00293 NUDIX domain AMIS_16750 PF00293 NUDIX domain AMIS_16780 PF00392 Bacterial regulatory proteins, gntR family AMIS_16780 PF00155 Aminotransferase class I and II AMIS_1680 PF01740 STAS domain AMIS_16800 PF01145 SPFH domain / Band 7 family AMIS_16820 PF00144 Beta-lactamase AMIS_16850 PF00072 Response regulator receiver domain AMIS_16850 PF00486 Transcriptional regulatory protein, C terminal AMIS_16860 PF00175 Oxidoreductase NAD-binding domain AMIS_16870 PF00588 SpoU rRNA Methylase family AMIS_1690 PF13581 Histidine kinase-like ATPase domain AMIS_16910 PF08245 Mur ligase middle domain AMIS_16920 PF01380 SIS domain AMIS_16920 PF01418 Helix-turn-helix domain, rpiR family AMIS_16940 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_16950 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_16980 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_170 PF02657 Fe-S metabolism associated domain AMIS_17000 PF02310 B12 binding domain AMIS_17000 PF02607 B12 binding domain AMIS_17000 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMIS_17000 PF00809 Pterin binding enzyme AMIS_17000 PF02574 Homocysteine S-methyltransferase AMIS_17030 PF07730 Histidine kinase AMIS_17040 PF00072 Response regulator receiver domain AMIS_17040 PF00196 Bacterial regulatory proteins, luxR family AMIS_17050 PF13344 Haloacid dehalogenase-like hydrolase AMIS_17050 PF00293 NUDIX domain AMIS_17060 PF00072 Response regulator receiver domain AMIS_17060 PF00990 Diguanylate cyclase, GGDEF domain AMIS_1710 PF00072 Response regulator receiver domain AMIS_1710 PF09456 RcsC Alpha-Beta-Loop (ABL) AMIS_1710 PF00512 His Kinase A (phospho-acceptor) domain AMIS_1710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17120 PF00425 chorismate binding enzyme AMIS_17120 PF00117 Glutamine amidotransferase class-I AMIS_17140 PF00486 Transcriptional regulatory protein, C terminal AMIS_17140 PF00072 Response regulator receiver domain AMIS_17150 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_17150 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_17150 PF14310 Fibronectin type III-like domain AMIS_1720 PF00072 Response regulator receiver domain AMIS_1720 PF00486 Transcriptional regulatory protein, C terminal AMIS_17210 PF00817 impB/mucB/samB family AMIS_17210 PF11799 impB/mucB/samB family C-terminal domain AMIS_17220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_17220 PF00205 Thiamine pyrophosphate enzyme, central domain AMIS_17220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIS_17230 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIS_17250 PF17933 Tetracyclin repressor-like, C-terminal domain AMIS_17250 PF00440 Bacterial regulatory proteins, tetR family AMIS_17280 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMIS_17310 PF13193 AMP-binding enzyme C-terminal domain AMIS_17310 PF00501 AMP-binding enzyme AMIS_17320 PF00535 Glycosyl transferase family 2 AMIS_17330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIS_17330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIS_17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17340 PF00072 Response regulator receiver domain AMIS_17340 PF13188 PAS domain AMIS_17340 PF08448 PAS fold AMIS_17340 PF00512 His Kinase A (phospho-acceptor) domain AMIS_17350 PF03793 PASTA domain AMIS_17350 PF00069 Protein kinase domain AMIS_17390 PF00563 EAL domain AMIS_17390 PF00989 PAS fold AMIS_17390 PF00990 Diguanylate cyclase, GGDEF domain AMIS_17390 PF01590 GAF domain AMIS_1740 PF00005 ABC transporter AMIS_17410 PF08361 MAATS-type transcriptional repressor, C-terminal region AMIS_17410 PF00440 Bacterial regulatory proteins, tetR family AMIS_17420 PF00890 FAD binding domain AMIS_17430 PF00571 CBS domain AMIS_17430 PF03471 Transporter associated domain AMIS_17430 PF01595 Cyclin M transmembrane N-terminal domain AMIS_17440 PF02040 Arsenical pump membrane protein AMIS_17450 PF03814 Potassium-transporting ATPase A subunit AMIS_17470 PF02669 K+-transporting ATPase, c chain AMIS_17480 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIS_17480 PF00512 His Kinase A (phospho-acceptor) domain AMIS_17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17480 PF13493 Domain of unknown function (DUF4118) AMIS_17480 PF00582 Universal stress protein family AMIS_17490 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIS_17490 PF13493 Domain of unknown function (DUF4118) AMIS_17490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17500 PF00486 Transcriptional regulatory protein, C terminal AMIS_17500 PF00072 Response regulator receiver domain AMIS_17510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_17570 PF07690 Major Facilitator Superfamily AMIS_17590 PF01568 Molydopterin dinucleotide binding domain AMIS_17590 PF00384 Molybdopterin oxidoreductase AMIS_1760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMIS_1760 PF00326 Prolyl oligopeptidase family AMIS_17620 PF01467 Cytidylyltransferase-like AMIS_17620 PF00294 pfkB family carbohydrate kinase AMIS_17630 PF00989 PAS fold AMIS_17630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17630 PF16736 Single Cache-like AMIS_17630 PF00512 His Kinase A (phospho-acceptor) domain AMIS_17640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_17650 PF00082 Subtilase family AMIS_17650 PF05922 Peptidase inhibitor I9 AMIS_17660 PF13492 GAF domain AMIS_17660 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIS_17660 PF00512 His Kinase A (phospho-acceptor) domain AMIS_17660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17660 PF13493 Domain of unknown function (DUF4118) AMIS_17670 PF00989 PAS fold AMIS_17670 PF00990 Diguanylate cyclase, GGDEF domain AMIS_17670 PF00563 EAL domain AMIS_17670 PF01590 GAF domain AMIS_17690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17690 PF00672 HAMP domain AMIS_17690 PF18698 Histidine kinase sensor domain AMIS_17690 PF00989 PAS fold AMIS_17690 PF00512 His Kinase A (phospho-acceptor) domain AMIS_17700 PF00360 Phytochrome region AMIS_17700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_17700 PF08446 PAS fold AMIS_17700 PF01590 GAF domain AMIS_17700 PF00512 His Kinase A (phospho-acceptor) domain AMIS_17710 PF00155 Aminotransferase class I and II AMIS_1780 PF01872 RibD C-terminal domain AMIS_17810 PF01594 AI-2E family transporter AMIS_17850 PF01740 STAS domain AMIS_17850 PF00916 Sulfate permease family AMIS_17880 PF00072 Response regulator receiver domain AMIS_17880 PF00196 Bacterial regulatory proteins, luxR family AMIS_1790 PF01872 RibD C-terminal domain AMIS_17900 PF03472 Autoinducer binding domain AMIS_17900 PF00196 Bacterial regulatory proteins, luxR family AMIS_17980 PF07690 Major Facilitator Superfamily AMIS_18030 PF03976 Polyphosphate kinase 2 (PPK2) AMIS_18090 PF01546 Peptidase family M20/M25/M40 AMIS_18090 PF07687 Peptidase dimerisation domain AMIS_1810 PF09308 LuxQ, periplasmic AMIS_1810 PF00512 His Kinase A (phospho-acceptor) domain AMIS_1810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_1810 PF00072 Response regulator receiver domain AMIS_18110 PF13520 Amino acid permease AMIS_18140 PF07690 Major Facilitator Superfamily AMIS_18150 PF01321 Creatinase/Prolidase N-terminal domain AMIS_18150 PF00557 Metallopeptidase family M24 AMIS_18170 PF00196 Bacterial regulatory proteins, luxR family AMIS_18170 PF00072 Response regulator receiver domain AMIS_18180 PF00005 ABC transporter AMIS_18180 PF00664 ABC transporter transmembrane region AMIS_18190 PF00005 ABC transporter AMIS_18190 PF00664 ABC transporter transmembrane region AMIS_1820 PF00072 Response regulator receiver domain AMIS_1820 PF00486 Transcriptional regulatory protein, C terminal AMIS_18210 PF12146 Serine aminopeptidase, S33 AMIS_18230 PF00989 PAS fold AMIS_18230 PF00512 His Kinase A (phospho-acceptor) domain AMIS_18230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_1830 PF03211 Pectate lyase AMIS_18300 PF00534 Glycosyl transferases group 1 AMIS_18300 PF13439 Glycosyltransferase Family 4 AMIS_18310 PF00535 Glycosyl transferase family 2 AMIS_18360 PF01384 Phosphate transporter family AMIS_18390 PF01699 Sodium/calcium exchanger protein AMIS_18400 PF03773 Predicted permease AMIS_18430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIS_18440 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_18450 PF00266 Aminotransferase class-V AMIS_1850 PF01740 STAS domain AMIS_18520 PF01925 Sulfite exporter TauE/SafE AMIS_18560 PF02867 Ribonucleotide reductase, barrel domain AMIS_18560 PF00317 Ribonucleotide reductase, all-alpha domain AMIS_18560 PF03477 ATP cone domain AMIS_18570 PF00781 Diacylglycerol kinase catalytic domain AMIS_18580 PF00196 Bacterial regulatory proteins, luxR family AMIS_1860 PF00202 Aminotransferase class-III AMIS_18600 PF04294 VanW like protein AMIS_18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_18610 PF00512 His Kinase A (phospho-acceptor) domain AMIS_18610 PF08448 PAS fold AMIS_18610 PF13188 PAS domain AMIS_18610 PF00072 Response regulator receiver domain AMIS_18620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMIS_18620 PF00672 HAMP domain AMIS_18620 PF00072 Response regulator receiver domain AMIS_18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_18620 PF00512 His Kinase A (phospho-acceptor) domain AMIS_18620 PF01627 Hpt domain AMIS_18630 PF03741 Integral membrane protein TerC family AMIS_18650 PF07690 Major Facilitator Superfamily AMIS_18660 PF00534 Glycosyl transferases group 1 AMIS_18660 PF13439 Glycosyltransferase Family 4 AMIS_18690 PF16657 Maltogenic Amylase, C-terminal domain AMIS_18690 PF02903 Alpha amylase, N-terminal ig-like domain AMIS_18690 PF00128 Alpha amylase, catalytic domain AMIS_1870 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_18720 PF00753 Metallo-beta-lactamase superfamily AMIS_18730 PF03793 PASTA domain AMIS_18730 PF00069 Protein kinase domain AMIS_18740 PF08281 Sigma-70, region 4 AMIS_18740 PF04542 Sigma-70 region 2 AMIS_18760 PF01476 LysM domain AMIS_18770 PF01594 AI-2E family transporter AMIS_1880 PF00578 AhpC/TSA family AMIS_18800 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMIS_18800 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMIS_18800 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMIS_18860 PF11847 Alpha-(1->3)-arabinofuranosyltransferase AMIS_18880 PF01568 Molydopterin dinucleotide binding domain AMIS_18880 PF00384 Molybdopterin oxidoreductase AMIS_18880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMIS_18910 PF00144 Beta-lactamase AMIS_18930 PF13188 PAS domain AMIS_18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_18930 PF00512 His Kinase A (phospho-acceptor) domain AMIS_18930 PF08448 PAS fold AMIS_18930 PF00072 Response regulator receiver domain AMIS_18940 PF01095 Pectinesterase AMIS_18950 PF06445 GyrI-like small molecule binding domain AMIS_18950 PF13411 MerR HTH family regulatory protein AMIS_190 PF04073 Aminoacyl-tRNA editing domain AMIS_190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIS_190 PF03129 Anticodon binding domain AMIS_1900 PF05140 ResB-like family AMIS_19000 PF00890 FAD binding domain AMIS_19020 PF00440 Bacterial regulatory proteins, tetR family AMIS_19020 PF17925 Tetracyclin repressor-like, C-terminal domain AMIS_19030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_19030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19040 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_19040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_19080 PF13460 NAD(P)H-binding AMIS_19100 PF07836 DmpG-like communication domain AMIS_19100 PF00682 HMGL-like AMIS_19110 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIS_19110 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AMIS_19120 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIS_19130 PF00890 FAD binding domain AMIS_19140 PF00890 FAD binding domain AMIS_19150 PF00970 Oxidoreductase FAD-binding domain AMIS_19150 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_19150 PF00175 Oxidoreductase NAD-binding domain AMIS_19170 PF00355 Rieske [2Fe-2S] domain AMIS_19180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_19180 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19190 PF12697 Alpha/beta hydrolase family AMIS_19200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIS_19210 PF01613 Flavin reductase like domain AMIS_19230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_19230 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_19230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19240 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_19240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_19250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_19250 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_19250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19260 PF00378 Enoyl-CoA hydratase/isomerase AMIS_19270 PF00501 AMP-binding enzyme AMIS_19270 PF13193 AMP-binding enzyme C-terminal domain AMIS_19280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19280 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_19280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_1930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMIS_19300 PF11271 Porin PorA AMIS_19320 PF02803 Thiolase, C-terminal domain AMIS_19320 PF00108 Thiolase, N-terminal domain AMIS_19330 PF00067 Cytochrome P450 AMIS_19350 PF01042 Endoribonuclease L-PSP AMIS_19360 PF03704 Bacterial transcriptional activator domain AMIS_19360 PF00931 NB-ARC domain AMIS_19360 PF00486 Transcriptional regulatory protein, C terminal AMIS_19370 PF00082 Subtilase family AMIS_19380 PF13229 Right handed beta helix region AMIS_19390 PF00732 GMC oxidoreductase AMIS_19390 PF05199 GMC oxidoreductase AMIS_1940 PF01040 UbiA prenyltransferase family AMIS_19430 PF00501 AMP-binding enzyme AMIS_19430 PF13193 AMP-binding enzyme C-terminal domain AMIS_19440 PF00378 Enoyl-CoA hydratase/isomerase AMIS_19450 PF13193 AMP-binding enzyme C-terminal domain AMIS_19450 PF00501 AMP-binding enzyme AMIS_19460 PF03060 Nitronate monooxygenase AMIS_19480 PF00392 Bacterial regulatory proteins, gntR family AMIS_19480 PF07702 UTRA domain AMIS_1950 PF04542 Sigma-70 region 2 AMIS_1950 PF08281 Sigma-70, region 4 AMIS_19680 PF02151 UvrB/uvrC motif AMIS_19680 PF01541 GIY-YIG catalytic domain AMIS_19680 PF08459 UvrC Helix-hairpin-helix N-terminal AMIS_1970 PF02441 Flavoprotein AMIS_20 PF00712 DNA polymerase III beta subunit, N-terminal domain AMIS_20 PF02768 DNA polymerase III beta subunit, C-terminal domain AMIS_20 PF02767 DNA polymerase III beta subunit, central domain AMIS_2010 PF00271 Helicase conserved C-terminal domain AMIS_2010 PF00270 DEAD/DEAH box helicase AMIS_2040 PF00877 NlpC/P60 family AMIS_2050 PF04055 Radical SAM superfamily AMIS_2080 PF01497 Periplasmic binding protein AMIS_20830 PF00041 Fibronectin type III domain AMIS_20830 PF00553 Cellulose binding domain AMIS_20830 PF02011 Glycosyl hydrolase family 48 AMIS_2090 PF01032 FecCD transport family AMIS_210 PF00581 Rhodanese-like domain AMIS_2100 PF00005 ABC transporter AMIS_21070 PF03796 DnaB-like helicase C terminal domain AMIS_21070 PF00772 DnaB-like helicase N terminal domain AMIS_2110 PF01313 Bacterial export proteins, family 3 AMIS_21140 PF00196 Bacterial regulatory proteins, luxR family AMIS_21140 PF00072 Response regulator receiver domain AMIS_2140 PF13538 UvrD-like helicase C-terminal domain AMIS_21510 PF00145 C-5 cytosine-specific DNA methylase AMIS_21580 PF00005 ABC transporter AMIS_21580 PF00664 ABC transporter transmembrane region AMIS_21630 PF00296 Luciferase-like monooxygenase AMIS_21640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_21640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_21650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_21650 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_21650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_21660 PF00108 Thiolase, N-terminal domain AMIS_21660 PF02803 Thiolase, C-terminal domain AMIS_21670 PF03060 Nitronate monooxygenase AMIS_21690 PF01144 Coenzyme A transferase AMIS_2170 PF02621 Menaquinone biosynthesis AMIS_21700 PF00378 Enoyl-CoA hydratase/isomerase AMIS_21720 PF00171 Aldehyde dehydrogenase family AMIS_21730 PF00753 Metallo-beta-lactamase superfamily AMIS_21730 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMIS_21740 PF16859 Tetracyclin repressor-like, C-terminal domain AMIS_21740 PF00440 Bacterial regulatory proteins, tetR family AMIS_21780 PF17932 Tetracyclin repressor-like, C-terminal domain AMIS_21780 PF00440 Bacterial regulatory proteins, tetR family AMIS_21790 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_21790 PF00107 Zinc-binding dehydrogenase AMIS_2180 PF00248 Aldo/keto reductase family AMIS_21800 PF00296 Luciferase-like monooxygenase AMIS_21840 PF00392 Bacterial regulatory proteins, gntR family AMIS_21840 PF07729 FCD domain AMIS_21850 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_2190 PF04434 SWIM zinc finger AMIS_21900 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AMIS_21900 PF06165 Glycosyltransferase family 36 AMIS_21910 PF00248 Aldo/keto reductase family AMIS_21990 PF05103 DivIVA protein AMIS_220 PF00183 Hsp90 protein AMIS_2200 PF12419 SNF2 Helicase protein AMIS_2200 PF00271 Helicase conserved C-terminal domain AMIS_2200 PF00176 SNF2 family N-terminal domain AMIS_22020 PF01565 FAD binding domain AMIS_22020 PF08031 Berberine and berberine like AMIS_22030 PF00294 pfkB family carbohydrate kinase AMIS_22060 PF00196 Bacterial regulatory proteins, luxR family AMIS_22060 PF00072 Response regulator receiver domain AMIS_22070 PF04075 F420H(2)-dependent quinone reductase AMIS_22080 PF00664 ABC transporter transmembrane region AMIS_22080 PF00005 ABC transporter AMIS_22090 PF00664 ABC transporter transmembrane region AMIS_22090 PF00005 ABC transporter AMIS_2210 PF04055 Radical SAM superfamily AMIS_22140 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AMIS_22150 PF16859 Tetracyclin repressor-like, C-terminal domain AMIS_22150 PF00440 Bacterial regulatory proteins, tetR family AMIS_22170 PF08281 Sigma-70, region 4 AMIS_22170 PF04542 Sigma-70 region 2 AMIS_22190 PF02743 Cache domain AMIS_22190 PF00672 HAMP domain AMIS_22190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_22200 PF00723 Glycosyl hydrolases family 15 AMIS_22250 PF00440 Bacterial regulatory proteins, tetR family AMIS_22260 PF07690 Major Facilitator Superfamily AMIS_22270 PF00196 Bacterial regulatory proteins, luxR family AMIS_2230 PF00392 Bacterial regulatory proteins, gntR family AMIS_2230 PF00155 Aminotransferase class I and II AMIS_22320 PF01183 Glycosyl hydrolases family 25 AMIS_22350 PF00561 alpha/beta hydrolase fold AMIS_22370 PF00486 Transcriptional regulatory protein, C terminal AMIS_22370 PF00931 NB-ARC domain AMIS_22370 PF03704 Bacterial transcriptional activator domain AMIS_22380 PF00196 Bacterial regulatory proteins, luxR family AMIS_22390 PF00892 EamA-like transporter family AMIS_22410 PF13087 AAA domain AMIS_22410 PF13195 Protein of unknown function (DUF4011) AMIS_22410 PF13086 AAA domain AMIS_22430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_22430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_22440 PF00202 Aminotransferase class-III AMIS_22450 PF17853 GGDEF-like domain AMIS_22450 PF13556 PucR C-terminal helix-turn-helix domain AMIS_22460 PF01494 FAD binding domain AMIS_22470 PF00797 N-acetyltransferase AMIS_22480 PF00072 Response regulator receiver domain AMIS_22480 PF00990 Diguanylate cyclase, GGDEF domain AMIS_22490 PF00067 Cytochrome P450 AMIS_22530 PF03733 Inner membrane component domain AMIS_22570 PF00293 NUDIX domain AMIS_22590 PF01212 Beta-eliminating lyase AMIS_22690 PF07690 Major Facilitator Superfamily AMIS_22700 PF00271 Helicase conserved C-terminal domain AMIS_22700 PF03880 DbpA RNA binding domain AMIS_22700 PF00270 DEAD/DEAH box helicase AMIS_22710 PF05175 Methyltransferase small domain AMIS_22740 PF00563 EAL domain AMIS_22760 PF07690 Major Facilitator Superfamily AMIS_22770 PF01638 HxlR-like helix-turn-helix AMIS_22800 PF07702 UTRA domain AMIS_22800 PF00392 Bacterial regulatory proteins, gntR family AMIS_22850 PF13520 Amino acid permease AMIS_22880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIS_22880 PF13378 Enolase C-terminal domain-like AMIS_22890 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_22900 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_22910 PF00005 ABC transporter AMIS_22910 PF08402 TOBE domain AMIS_22930 PF00356 Bacterial regulatory proteins, lacI family AMIS_22960 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_22980 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_22980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_22980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_22990 PF00171 Aldehyde dehydrogenase family AMIS_23000 PF07729 FCD domain AMIS_23000 PF00392 Bacterial regulatory proteins, gntR family AMIS_23020 PF17932 Tetracyclin repressor-like, C-terminal domain AMIS_23020 PF00440 Bacterial regulatory proteins, tetR family AMIS_23030 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_23030 PF00107 Zinc-binding dehydrogenase AMIS_23050 PF02013 Cellulose or protein binding domain AMIS_23050 PF00150 Cellulase (glycosyl hydrolase family 5) AMIS_23060 PF00384 Molybdopterin oxidoreductase AMIS_23060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMIS_23060 PF01568 Molydopterin dinucleotide binding domain AMIS_23090 PF02687 FtsX-like permease family AMIS_23090 PF12704 MacB-like periplasmic core domain AMIS_23090 PF00005 ABC transporter AMIS_23100 PF00005 ABC transporter AMIS_23140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIS_23140 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_23150 PF00005 ABC transporter AMIS_23170 PF00582 Universal stress protein family AMIS_23180 PF03466 LysR substrate binding domain AMIS_23180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_23200 PF04607 Region found in RelA / SpoT proteins AMIS_23220 PF00296 Luciferase-like monooxygenase AMIS_23240 PF07690 Major Facilitator Superfamily AMIS_23270 PF00128 Alpha amylase, catalytic domain AMIS_23270 PF00686 Starch binding domain AMIS_23270 PF02806 Alpha amylase, C-terminal all-beta domain AMIS_23350 PF03633 Glycosyl hydrolase family 65, C-terminal domain AMIS_23350 PF03632 Glycosyl hydrolase family 65 central catalytic domain AMIS_23350 PF03636 Glycosyl hydrolase family 65, N-terminal domain AMIS_23380 PF00196 Bacterial regulatory proteins, luxR family AMIS_23380 PF00072 Response regulator receiver domain AMIS_23390 PF07730 Histidine kinase AMIS_23490 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_23510 PF13580 SIS domain AMIS_23520 PF01380 SIS domain AMIS_23520 PF01418 Helix-turn-helix domain, rpiR family AMIS_23560 PF00486 Transcriptional regulatory protein, C terminal AMIS_23560 PF00931 NB-ARC domain AMIS_23560 PF03704 Bacterial transcriptional activator domain AMIS_23580 PF02522 Aminoglycoside 3-N-acetyltransferase AMIS_23620 PF03466 LysR substrate binding domain AMIS_23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_23640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_23690 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIS_23720 PF00440 Bacterial regulatory proteins, tetR family AMIS_23760 PF00999 Sodium/hydrogen exchanger family AMIS_23770 PF00313 'Cold-shock' DNA-binding domain AMIS_23780 PF00196 Bacterial regulatory proteins, luxR family AMIS_23780 PF00072 Response regulator receiver domain AMIS_23790 PF07730 Histidine kinase AMIS_23810 PF00083 Sugar (and other) transporter AMIS_23840 PF03176 MMPL family AMIS_23860 PF04616 Glycosyl hydrolases family 43 AMIS_23870 PF00544 Pectate lyase AMIS_23880 PF07944 Beta-L-arabinofuranosidase, GH127 AMIS_23890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIS_23890 PF00289 Biotin carboxylase, N-terminal domain AMIS_23890 PF02785 Biotin carboxylase C-terminal domain AMIS_23900 PF00571 CBS domain AMIS_23900 PF03471 Transporter associated domain AMIS_23900 PF01595 Cyclin M transmembrane N-terminal domain AMIS_23910 PF01595 Cyclin M transmembrane N-terminal domain AMIS_23910 PF00571 CBS domain AMIS_23910 PF03471 Transporter associated domain AMIS_23930 PF00082 Subtilase family AMIS_23930 PF05922 Peptidase inhibitor I9 AMIS_23940 PF07075 Protein of unknown function (DUF1343) AMIS_23970 PF00171 Aldehyde dehydrogenase family AMIS_23980 PF00202 Aminotransferase class-III AMIS_23990 PF03466 LysR substrate binding domain AMIS_23990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_24000 PF01263 Aldose 1-epimerase AMIS_24010 PF03176 MMPL family AMIS_24020 PF07730 Histidine kinase AMIS_24030 PF00196 Bacterial regulatory proteins, luxR family AMIS_24030 PF00072 Response regulator receiver domain AMIS_24060 PF08279 HTH domain AMIS_24060 PF13280 WYL domain AMIS_24090 PF00155 Aminotransferase class I and II AMIS_24090 PF13480 Acetyltransferase (GNAT) domain AMIS_24100 PF10905 Protein of unknown function (DUF2695) AMIS_24120 PF00999 Sodium/hydrogen exchanger family AMIS_24130 PF00171 Aldehyde dehydrogenase family AMIS_24140 PF01266 FAD dependent oxidoreductase AMIS_24150 PF00027 Cyclic nucleotide-binding domain AMIS_24150 PF00325 Bacterial regulatory proteins, crp family AMIS_24220 PF00196 Bacterial regulatory proteins, luxR family AMIS_24230 PF00563 EAL domain AMIS_24230 PF03707 Bacterial signalling protein N terminal repeat AMIS_24230 PF00990 Diguanylate cyclase, GGDEF domain AMIS_24240 PF01726 LexA DNA binding domain AMIS_24240 PF00717 Peptidase S24-like AMIS_24260 PF05532 CsbD-like AMIS_24270 PF01545 Cation efflux family AMIS_24270 PF16916 Dimerisation domain of Zinc Transporter AMIS_24320 PF00248 Aldo/keto reductase family AMIS_24330 PF04321 RmlD substrate binding domain AMIS_24340 PF16363 GDP-mannose 4,6 dehydratase AMIS_24350 PF00483 Nucleotidyl transferase AMIS_24360 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMIS_24440 PF01494 FAD binding domain AMIS_24450 PF17754 MftR C-terminal domain AMIS_24450 PF00440 Bacterial regulatory proteins, tetR family AMIS_24460 PF07690 Major Facilitator Superfamily AMIS_24470 PF00356 Bacterial regulatory proteins, lacI family AMIS_24490 PF00005 ABC transporter AMIS_24510 PF09819 ABC-type cobalt transport system, permease component AMIS_24530 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_24530 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_24530 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_24530 PF17871 AAA lid domain AMIS_24530 PF07724 AAA domain (Cdc48 subfamily) AMIS_24550 PF03704 Bacterial transcriptional activator domain AMIS_24550 PF00931 NB-ARC domain AMIS_24550 PF00486 Transcriptional regulatory protein, C terminal AMIS_24560 PF00392 Bacterial regulatory proteins, gntR family AMIS_24560 PF07729 FCD domain AMIS_24570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIS_24580 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_24590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_24590 PF00005 ABC transporter AMIS_24600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_24600 PF00005 ABC transporter AMIS_24610 PF00701 Dihydrodipicolinate synthetase family AMIS_24620 PF00480 ROK family AMIS_24630 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AMIS_24640 PF07859 alpha/beta hydrolase fold AMIS_24650 PF13419 Haloacid dehalogenase-like hydrolase AMIS_24670 PF12697 Alpha/beta hydrolase family AMIS_24680 PF00196 Bacterial regulatory proteins, luxR family AMIS_24690 PF00196 Bacterial regulatory proteins, luxR family AMIS_24710 PF00561 alpha/beta hydrolase fold AMIS_24770 PF09339 IclR helix-turn-helix domain AMIS_24770 PF01614 Bacterial transcriptional regulator AMIS_2480 PF00704 Glycosyl hydrolases family 18 AMIS_2480 PF00041 Fibronectin type III domain AMIS_24820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_24820 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_24820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_24850 PF14256 YwiC-like protein AMIS_24870 PF00005 ABC transporter AMIS_24870 PF03459 TOBE domain AMIS_24880 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_24940 PF04199 Putative cyclase AMIS_24950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIS_24950 PF00205 Thiamine pyrophosphate enzyme, central domain AMIS_24950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_24980 PF01070 FMN-dependent dehydrogenase AMIS_24990 PF07311 Dodecin AMIS_250 PF00289 Biotin carboxylase, N-terminal domain AMIS_250 PF02785 Biotin carboxylase C-terminal domain AMIS_250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIS_25000 PF01381 Helix-turn-helix AMIS_25010 PF07690 Major Facilitator Superfamily AMIS_25030 PF00072 Response regulator receiver domain AMIS_25030 PF13188 PAS domain AMIS_25030 PF08448 PAS fold AMIS_25030 PF00512 His Kinase A (phospho-acceptor) domain AMIS_25030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_25050 PF01209 ubiE/COQ5 methyltransferase family AMIS_25060 PF00005 ABC transporter AMIS_25080 PF01032 FecCD transport family AMIS_25100 PF01566 Natural resistance-associated macrophage protein AMIS_25100 PF03358 NADPH-dependent FMN reductase AMIS_25120 PF05199 GMC oxidoreductase AMIS_25120 PF00732 GMC oxidoreductase AMIS_25140 PF01752 Collagenase AMIS_25140 PF08453 Peptidase family M9 N-terminal AMIS_25160 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMIS_25180 PF01022 Bacterial regulatory protein, arsR family AMIS_25240 PF00544 Pectate lyase AMIS_25250 PF00459 Inositol monophosphatase family AMIS_25260 PF01047 MarR family AMIS_25310 PF00440 Bacterial regulatory proteins, tetR family AMIS_25310 PF16925 Tetracyclin repressor-like, C-terminal domain AMIS_25320 PF03358 NADPH-dependent FMN reductase AMIS_25330 PF03060 Nitronate monooxygenase AMIS_25380 PF00685 Sulfotransferase domain AMIS_25400 PF01878 EVE domain AMIS_25420 PF13673 Acetyltransferase (GNAT) domain AMIS_25420 PF04229 GrpB protein AMIS_25430 PF00989 PAS fold AMIS_25430 PF01627 Hpt domain AMIS_25430 PF00072 Response regulator receiver domain AMIS_25430 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMIS_25430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_25430 PF00512 His Kinase A (phospho-acceptor) domain AMIS_25470 PF13419 Haloacid dehalogenase-like hydrolase AMIS_25500 PF07690 Major Facilitator Superfamily AMIS_25510 PF02082 Transcriptional regulator AMIS_25530 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_25530 PF00107 Zinc-binding dehydrogenase AMIS_25540 PF02310 B12 binding domain AMIS_25540 PF04055 Radical SAM superfamily AMIS_25560 PF13193 AMP-binding enzyme C-terminal domain AMIS_25560 PF00501 AMP-binding enzyme AMIS_25570 PF00378 Enoyl-CoA hydratase/isomerase AMIS_25640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_25640 PF13188 PAS domain AMIS_25640 PF00072 Response regulator receiver domain AMIS_25640 PF00512 His Kinase A (phospho-acceptor) domain AMIS_25640 PF08448 PAS fold AMIS_25700 PF07730 Histidine kinase AMIS_25700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_25720 PF00072 Response regulator receiver domain AMIS_25720 PF00196 Bacterial regulatory proteins, luxR family AMIS_25760 PF00196 Bacterial regulatory proteins, luxR family AMIS_25760 PF17874 MalT-like TPR region AMIS_25770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIS_25770 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_25780 PF00578 AhpC/TSA family AMIS_25780 PF02683 Cytochrome C biogenesis protein transmembrane region AMIS_25780 PF17991 Thioredoxin like C-terminal domain AMIS_25790 PF01027 Inhibitor of apoptosis-promoting Bax1 AMIS_25810 PF12697 Alpha/beta hydrolase family AMIS_25820 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding AMIS_25820 PF01565 FAD binding domain AMIS_25860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_25860 PF00205 Thiamine pyrophosphate enzyme, central domain AMIS_25860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIS_25870 PF01494 FAD binding domain AMIS_25890 PF04542 Sigma-70 region 2 AMIS_25890 PF08281 Sigma-70, region 4 AMIS_25910 PF00196 Bacterial regulatory proteins, luxR family AMIS_25910 PF00072 Response regulator receiver domain AMIS_25930 PF06441 Epoxide hydrolase N terminus AMIS_25970 PF05368 NmrA-like family AMIS_25980 PF01638 HxlR-like helix-turn-helix AMIS_260 PF00682 HMGL-like AMIS_26060 PF08281 Sigma-70, region 4 AMIS_26060 PF04542 Sigma-70 region 2 AMIS_26080 PF00989 PAS fold AMIS_26080 PF00512 His Kinase A (phospho-acceptor) domain AMIS_26080 PF18698 Histidine kinase sensor domain AMIS_26080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_26080 PF00672 HAMP domain AMIS_26090 PF00072 Response regulator receiver domain AMIS_26090 PF00486 Transcriptional regulatory protein, C terminal AMIS_26100 PF00106 short chain dehydrogenase AMIS_26120 PF12704 MacB-like periplasmic core domain AMIS_26120 PF00005 ABC transporter AMIS_26120 PF02687 FtsX-like permease family AMIS_26130 PF00005 ABC transporter AMIS_26130 PF02687 FtsX-like permease family AMIS_26130 PF12704 MacB-like periplasmic core domain AMIS_26150 PF00486 Transcriptional regulatory protein, C terminal AMIS_26150 PF00072 Response regulator receiver domain AMIS_26160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_26160 PF16736 Single Cache-like AMIS_26160 PF00989 PAS fold AMIS_26160 PF00512 His Kinase A (phospho-acceptor) domain AMIS_26170 PF00005 ABC transporter AMIS_26170 PF02687 FtsX-like permease family AMIS_26170 PF12704 MacB-like periplasmic core domain AMIS_26180 PF00005 ABC transporter AMIS_26180 PF02687 FtsX-like permease family AMIS_26180 PF12704 MacB-like periplasmic core domain AMIS_26200 PF00072 Response regulator receiver domain AMIS_26200 PF00196 Bacterial regulatory proteins, luxR family AMIS_26210 PF07730 Histidine kinase AMIS_26210 PF00672 HAMP domain AMIS_26210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_26210 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMIS_26260 PF01638 HxlR-like helix-turn-helix AMIS_26270 PF01341 Glycosyl hydrolases family 6 AMIS_26300 PF00356 Bacterial regulatory proteins, lacI family AMIS_26360 PF00232 Glycosyl hydrolase family 1 AMIS_26370 PF00135 Carboxylesterase family AMIS_26400 PF01494 FAD binding domain AMIS_26430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_26430 PF03466 LysR substrate binding domain AMIS_26460 PF00360 Phytochrome region AMIS_26460 PF00990 Diguanylate cyclase, GGDEF domain AMIS_26460 PF01590 GAF domain AMIS_26460 PF00563 EAL domain AMIS_26520 PF00196 Bacterial regulatory proteins, luxR family AMIS_26520 PF00072 Response regulator receiver domain AMIS_26530 PF00512 His Kinase A (phospho-acceptor) domain AMIS_26530 PF00672 HAMP domain AMIS_26530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_26540 PF03176 MMPL family AMIS_26580 PF00107 Zinc-binding dehydrogenase AMIS_26580 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_26710 PF03358 NADPH-dependent FMN reductase AMIS_26760 PF01494 FAD binding domain AMIS_26820 PF00005 ABC transporter AMIS_26820 PF00664 ABC transporter transmembrane region AMIS_26840 PF00534 Glycosyl transferases group 1 AMIS_26840 PF13579 Glycosyl transferase 4-like domain AMIS_26850 PF07730 Histidine kinase AMIS_26860 PF00072 Response regulator receiver domain AMIS_26860 PF00196 Bacterial regulatory proteins, luxR family AMIS_26870 PF00005 ABC transporter AMIS_26890 PF00072 Response regulator receiver domain AMIS_26890 PF00486 Transcriptional regulatory protein, C terminal AMIS_26900 PF09335 SNARE associated Golgi protein AMIS_26910 PF00999 Sodium/hydrogen exchanger family AMIS_26910 PF02080 TrkA-C domain AMIS_26910 PF03471 Transporter associated domain AMIS_26920 PF01594 AI-2E family transporter AMIS_26930 PF00486 Transcriptional regulatory protein, C terminal AMIS_26930 PF00072 Response regulator receiver domain AMIS_26950 PF00152 tRNA synthetases class II (D, K and N) AMIS_26950 PF09924 Uncharacterised conserved protein (DUF2156) AMIS_26950 PF16995 Transmembrane region of lysyl-tRNA synthetase AMIS_26950 PF01336 OB-fold nucleic acid binding domain AMIS_26960 PF01522 Polysaccharide deacetylase AMIS_26990 PF01593 Flavin containing amine oxidoreductase AMIS_27000 PF08362 YcdC-like protein, C-terminal region AMIS_27000 PF00440 Bacterial regulatory proteins, tetR family AMIS_27010 PF00440 Bacterial regulatory proteins, tetR family AMIS_27010 PF17754 MftR C-terminal domain AMIS_27020 PF05199 GMC oxidoreductase AMIS_27020 PF00732 GMC oxidoreductase AMIS_27030 PF00171 Aldehyde dehydrogenase family AMIS_27050 PF00107 Zinc-binding dehydrogenase AMIS_27050 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_27100 PF00440 Bacterial regulatory proteins, tetR family AMIS_27120 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_27120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_27120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_27130 PF00549 CoA-ligase AMIS_27130 PF08442 ATP-grasp domain AMIS_27150 PF07694 5TMR of 5TMR-LYT AMIS_27150 PF00990 Diguanylate cyclase, GGDEF domain AMIS_27190 PF00535 Glycosyl transferase family 2 AMIS_27200 PF02633 Creatinine amidohydrolase AMIS_27210 PF01070 FMN-dependent dehydrogenase AMIS_27220 PF13186 Iron-sulfur cluster-binding domain AMIS_27220 PF04055 Radical SAM superfamily AMIS_27260 PF00296 Luciferase-like monooxygenase AMIS_27280 PF00202 Aminotransferase class-III AMIS_27300 PF00743 Flavin-binding monooxygenase-like AMIS_27310 PF01613 Flavin reductase like domain AMIS_27330 PF00067 Cytochrome P450 AMIS_27360 PF07690 Major Facilitator Superfamily AMIS_27370 PF01494 FAD binding domain AMIS_27380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIS_27380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIS_27390 PF03176 MMPL family AMIS_27410 PF00561 alpha/beta hydrolase fold AMIS_27430 PF00196 Bacterial regulatory proteins, luxR family AMIS_27430 PF00072 Response regulator receiver domain AMIS_27440 PF07730 Histidine kinase AMIS_27450 PF00005 ABC transporter AMIS_27470 PF01022 Bacterial regulatory protein, arsR family AMIS_27570 PF00144 Beta-lactamase AMIS_27600 PF08450 SMP-30/Gluconolactonase/LRE-like region AMIS_27610 PF02522 Aminoglycoside 3-N-acetyltransferase AMIS_27630 PF01494 FAD binding domain AMIS_27640 PF12802 MarR family AMIS_27670 PF03793 PASTA domain AMIS_27670 PF00069 Protein kinase domain AMIS_27710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_27710 PF03466 LysR substrate binding domain AMIS_27800 PF00491 Arginase family AMIS_27810 PF04199 Putative cyclase AMIS_27880 PF01614 Bacterial transcriptional regulator AMIS_27880 PF09339 IclR helix-turn-helix domain AMIS_2790 PF14659 Phage integrase, N-terminal SAM-like domain AMIS_2790 PF00589 Phage integrase family AMIS_27900 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_27910 PF00331 Glycosyl hydrolase family 10 AMIS_27910 PF00553 Cellulose binding domain AMIS_27920 PF00920 Dehydratase family AMIS_27930 PF03707 Bacterial signalling protein N terminal repeat AMIS_27930 PF00990 Diguanylate cyclase, GGDEF domain AMIS_27930 PF00563 EAL domain AMIS_27960 PF16499 Alpha galactosidase A AMIS_27960 PF17801 Alpha galactosidase C-terminal beta sandwich domain AMIS_27990 PF04616 Glycosyl hydrolases family 43 AMIS_2800 PF01209 ubiE/COQ5 methyltransferase family AMIS_28010 PF01638 HxlR-like helix-turn-helix AMIS_28030 PF01297 Zinc-uptake complex component A periplasmic AMIS_28050 PF00950 ABC 3 transport family AMIS_28060 PF00005 ABC transporter AMIS_28090 PF07944 Beta-L-arabinofuranosidase, GH127 AMIS_28100 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_28110 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_28130 PF13407 Periplasmic binding protein domain AMIS_28130 PF00356 Bacterial regulatory proteins, lacI family AMIS_28160 PF00950 ABC 3 transport family AMIS_28170 PF00005 ABC transporter AMIS_28190 PF01297 Zinc-uptake complex component A periplasmic AMIS_2820 PF01494 FAD binding domain AMIS_28230 PF00830 Ribosomal L28 family AMIS_28240 PF00471 Ribosomal protein L33 AMIS_28250 PF00253 Ribosomal protein S14p/S29e AMIS_28280 PF00553 Cellulose binding domain AMIS_28280 PF01341 Glycosyl hydrolases family 6 AMIS_28290 PF00331 Glycosyl hydrolase family 10 AMIS_28290 PF00652 Ricin-type beta-trefoil lectin domain AMIS_2830 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMIS_28300 PF00331 Glycosyl hydrolase family 10 AMIS_28300 PF00652 Ricin-type beta-trefoil lectin domain AMIS_28310 PF16499 Alpha galactosidase A AMIS_28310 PF17801 Alpha galactosidase C-terminal beta sandwich domain AMIS_28320 PF04616 Glycosyl hydrolases family 43 AMIS_28320 PF03422 Carbohydrate binding module (family 6) AMIS_28340 PF03664 Glycosyl hydrolase family 62 AMIS_28340 PF00652 Ricin-type beta-trefoil lectin domain AMIS_2840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMIS_28430 PF01370 NAD dependent epimerase/dehydratase family AMIS_28490 PF04545 Sigma-70, region 4 AMIS_28490 PF04542 Sigma-70 region 2 AMIS_2850 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMIS_28500 PF02687 FtsX-like permease family AMIS_28510 PF00005 ABC transporter AMIS_28510 PF02687 FtsX-like permease family AMIS_28510 PF12704 MacB-like periplasmic core domain AMIS_28530 PF00990 Diguanylate cyclase, GGDEF domain AMIS_28530 PF00563 EAL domain AMIS_28530 PF08447 PAS fold AMIS_28530 PF08448 PAS fold AMIS_28540 PF00248 Aldo/keto reductase family AMIS_28580 PF01804 Penicillin amidase AMIS_2860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMIS_28610 PF00487 Fatty acid desaturase AMIS_28630 PF07690 Major Facilitator Superfamily AMIS_28650 PF04542 Sigma-70 region 2 AMIS_28650 PF08281 Sigma-70, region 4 AMIS_28650 PF12680 SnoaL-like domain AMIS_28670 PF00440 Bacterial regulatory proteins, tetR family AMIS_28670 PF09209 Tetracyclin repressor-like, C-terminal domain AMIS_28690 PF07690 Major Facilitator Superfamily AMIS_28710 PF01494 FAD binding domain AMIS_28780 PF00196 Bacterial regulatory proteins, luxR family AMIS_28780 PF00072 Response regulator receiver domain AMIS_28790 PF03211 Pectate lyase AMIS_2880 PF10531 SLBB domain AMIS_2880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIS_2880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMIS_28820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMIS_28830 PF00072 Response regulator receiver domain AMIS_28850 PF00072 Response regulator receiver domain AMIS_28850 PF00486 Transcriptional regulatory protein, C terminal AMIS_2890 PF00384 Molybdopterin oxidoreductase AMIS_2890 PF01568 Molydopterin dinucleotide binding domain AMIS_2890 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMIS_28910 PF01593 Flavin containing amine oxidoreductase AMIS_28940 PF00665 Integrase core domain AMIS_290 PF01039 Carboxyl transferase domain AMIS_2900 PF00146 NADH dehydrogenase AMIS_29030 PF01638 HxlR-like helix-turn-helix AMIS_29050 PF00072 Response regulator receiver domain AMIS_29050 PF00672 HAMP domain AMIS_29050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_29050 PF00512 His Kinase A (phospho-acceptor) domain AMIS_29050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMIS_29050 PF01627 Hpt domain AMIS_29060 PF04542 Sigma-70 region 2 AMIS_29060 PF04545 Sigma-70, region 4 AMIS_29080 PF02469 Fasciclin domain AMIS_2910 PF12838 4Fe-4S dicluster domain AMIS_29110 PF00196 Bacterial regulatory proteins, luxR family AMIS_29110 PF00072 Response regulator receiver domain AMIS_29120 PF07730 Histidine kinase AMIS_29120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_29120 PF05231 MASE1 AMIS_29140 PF09383 NIL domain AMIS_29140 PF00005 ABC transporter AMIS_29190 PF04261 Dyp-type peroxidase family AMIS_2920 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMIS_29210 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AMIS_29210 PF05425 Copper resistance protein D AMIS_29230 PF01032 FecCD transport family AMIS_29240 PF01032 FecCD transport family AMIS_29250 PF00005 ABC transporter AMIS_29260 PF00180 Isocitrate/isopropylmalate dehydrogenase AMIS_29270 PF16483 Beta-1,3-glucanase AMIS_29270 PF00652 Ricin-type beta-trefoil lectin domain AMIS_29280 PF00005 ABC transporter AMIS_29280 PF02687 FtsX-like permease family AMIS_29280 PF12704 MacB-like periplasmic core domain AMIS_2930 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMIS_29310 PF00144 Beta-lactamase AMIS_29350 PF00561 alpha/beta hydrolase fold AMIS_29360 PF07730 Histidine kinase AMIS_29370 PF00196 Bacterial regulatory proteins, luxR family AMIS_29370 PF00072 Response regulator receiver domain AMIS_29390 PF00196 Bacterial regulatory proteins, luxR family AMIS_2940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMIS_2940 PF00361 Proton-conducting membrane transporter AMIS_29400 PF00196 Bacterial regulatory proteins, luxR family AMIS_29420 PF00881 Nitroreductase family AMIS_29490 PF00356 Bacterial regulatory proteins, lacI family AMIS_2950 PF00361 Proton-conducting membrane transporter AMIS_29510 PF06983 3-demethylubiquinone-9 3-methyltransferase AMIS_29520 PF00672 HAMP domain AMIS_29520 PF16591 Helical bimodular sensor domain AMIS_29520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_29570 PF13546 DDE superfamily endonuclease AMIS_2960 PF00361 Proton-conducting membrane transporter AMIS_29600 PF07729 FCD domain AMIS_29600 PF00392 Bacterial regulatory proteins, gntR family AMIS_29610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIS_29610 PF13378 Enolase C-terminal domain-like AMIS_29620 PF00248 Aldo/keto reductase family AMIS_29640 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIS_29650 PF13378 Enolase C-terminal domain-like AMIS_29650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIS_29680 PF07729 FCD domain AMIS_29680 PF00392 Bacterial regulatory proteins, gntR family AMIS_2970 PF00348 Polyprenyl synthetase AMIS_29710 PF00293 NUDIX domain AMIS_29730 PF00480 ROK family AMIS_29740 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_29750 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_29790 PF04542 Sigma-70 region 2 AMIS_29790 PF08281 Sigma-70, region 4 AMIS_29890 PF05448 Acetyl xylan esterase (AXE1) AMIS_29900 PF16875 Glycosyl hydrolase family 36 N-terminal domain AMIS_29900 PF16874 Glycosyl hydrolase family 36 C-terminal domain AMIS_29910 PF00480 ROK family AMIS_29970 PF00072 Response regulator receiver domain AMIS_29970 PF00486 Transcriptional regulatory protein, C terminal AMIS_29980 PF00512 His Kinase A (phospho-acceptor) domain AMIS_29980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_29980 PF00672 HAMP domain AMIS_29990 PF06965 Na+/H+ antiporter 1 AMIS_30 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMIS_30 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIS_300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_300 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_30010 PF00072 Response regulator receiver domain AMIS_30030 PF00672 HAMP domain AMIS_30030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_30030 PF00512 His Kinase A (phospho-acceptor) domain AMIS_3010 PF00892 EamA-like transporter family AMIS_30100 PF01740 STAS domain AMIS_30100 PF00916 Sulfate permease family AMIS_30110 PF13411 MerR HTH family regulatory protein AMIS_30110 PF07739 TipAS antibiotic-recognition domain AMIS_30120 PF00392 Bacterial regulatory proteins, gntR family AMIS_30120 PF07729 FCD domain AMIS_30130 PF07690 Major Facilitator Superfamily AMIS_30150 PF00210 Ferritin-like domain AMIS_3020 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AMIS_30220 PF02417 Chromate transporter AMIS_30240 PF04539 Sigma-70 region 3 AMIS_30240 PF04545 Sigma-70, region 4 AMIS_30240 PF04542 Sigma-70 region 2 AMIS_30310 PF09594 Glycosyltransferase family 87 AMIS_30320 PF00512 His Kinase A (phospho-acceptor) domain AMIS_30320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_30320 PF00672 HAMP domain AMIS_30330 PF00072 Response regulator receiver domain AMIS_30330 PF00486 Transcriptional regulatory protein, C terminal AMIS_30350 PF00072 Response regulator receiver domain AMIS_30350 PF00486 Transcriptional regulatory protein, C terminal AMIS_30360 PF00067 Cytochrome P450 AMIS_30380 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_30380 PF14759 Reductase C-terminal AMIS_30420 PF07730 Histidine kinase AMIS_30420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_30430 PF00196 Bacterial regulatory proteins, luxR family AMIS_30430 PF00072 Response regulator receiver domain AMIS_30440 PF03176 MMPL family AMIS_30460 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIS_30460 PF13180 PDZ domain AMIS_30470 PF13188 PAS domain AMIS_30470 PF00563 EAL domain AMIS_30470 PF00990 Diguanylate cyclase, GGDEF domain AMIS_30470 PF03707 Bacterial signalling protein N terminal repeat AMIS_30480 PF03707 Bacterial signalling protein N terminal repeat AMIS_30480 PF00563 EAL domain AMIS_30480 PF00990 Diguanylate cyclase, GGDEF domain AMIS_30490 PF03480 Bacterial extracellular solute-binding protein, family 7 AMIS_30520 PF13411 MerR HTH family regulatory protein AMIS_30550 PF01197 Ribosomal protein L31 AMIS_30580 PF00444 Ribosomal protein L36 AMIS_30600 PF01494 FAD binding domain AMIS_30650 PF10503 Esterase PHB depolymerase AMIS_30690 PF03976 Polyphosphate kinase 2 (PPK2) AMIS_30700 PF00689 Cation transporting ATPase, C-terminus AMIS_30700 PF00690 Cation transporter/ATPase, N-terminus AMIS_30710 PF12697 Alpha/beta hydrolase family AMIS_30720 PF07690 Major Facilitator Superfamily AMIS_30730 PF00072 Response regulator receiver domain AMIS_30730 PF00196 Bacterial regulatory proteins, luxR family AMIS_30770 PF01522 Polysaccharide deacetylase AMIS_30780 PF00890 FAD binding domain AMIS_3080 PF00561 alpha/beta hydrolase fold AMIS_30890 PF00069 Protein kinase domain AMIS_30890 PF03793 PASTA domain AMIS_30930 PF01467 Cytidylyltransferase-like AMIS_30950 PF00005 ABC transporter AMIS_30960 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_30980 PF09084 NMT1/THI5 like AMIS_30990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMIS_30990 PF00072 Response regulator receiver domain AMIS_30990 PF01627 Hpt domain AMIS_30990 PF00512 His Kinase A (phospho-acceptor) domain AMIS_30990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_30990 PF00672 HAMP domain AMIS_310 PF01047 MarR family AMIS_31000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_31000 PF00512 His Kinase A (phospho-acceptor) domain AMIS_31000 PF07689 KaiB domain AMIS_31010 PF00512 His Kinase A (phospho-acceptor) domain AMIS_31010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_31010 PF08448 PAS fold AMIS_31010 PF00072 Response regulator receiver domain AMIS_31010 PF13188 PAS domain AMIS_31020 PF01740 STAS domain AMIS_31020 PF00916 Sulfate permease family AMIS_31040 PF00011 Hsp20/alpha crystallin family AMIS_31050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_3110 PF13193 AMP-binding enzyme C-terminal domain AMIS_3110 PF00501 AMP-binding enzyme AMIS_3110 PF16177 Acetyl-coenzyme A synthetase N-terminus AMIS_31150 PF01590 GAF domain AMIS_31150 PF00360 Phytochrome region AMIS_31150 PF00563 EAL domain AMIS_31150 PF00990 Diguanylate cyclase, GGDEF domain AMIS_31170 PF01209 ubiE/COQ5 methyltransferase family AMIS_31250 PF01494 FAD binding domain AMIS_31260 PF09335 SNARE associated Golgi protein AMIS_31270 PF00296 Luciferase-like monooxygenase AMIS_31280 PF00296 Luciferase-like monooxygenase AMIS_31380 PF00400 WD domain, G-beta repeat AMIS_31380 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AMIS_31390 PF00067 Cytochrome P450 AMIS_31400 PF00144 Beta-lactamase AMIS_3150 PF01740 STAS domain AMIS_31570 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_31570 PF00107 Zinc-binding dehydrogenase AMIS_31630 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMIS_31630 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMIS_31640 PF03781 Sulfatase-modifying factor enzyme 1 AMIS_31670 PF00196 Bacterial regulatory proteins, luxR family AMIS_31680 PF00196 Bacterial regulatory proteins, luxR family AMIS_31690 PF00196 Bacterial regulatory proteins, luxR family AMIS_31690 PF00072 Response regulator receiver domain AMIS_3170 PF00437 Type II/IV secretion system protein AMIS_31720 PF00196 Bacterial regulatory proteins, luxR family AMIS_31730 PF00561 alpha/beta hydrolase fold AMIS_31830 PF00107 Zinc-binding dehydrogenase AMIS_31830 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_31830 PF13823 Alcohol dehydrogenase GroES-associated AMIS_31900 PF00486 Transcriptional regulatory protein, C terminal AMIS_31900 PF00072 Response regulator receiver domain AMIS_31910 PF00672 HAMP domain AMIS_31910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_31910 PF00512 His Kinase A (phospho-acceptor) domain AMIS_31920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_31920 PF00672 HAMP domain AMIS_31920 PF17200 Single Cache domain 2 AMIS_31950 PF00561 alpha/beta hydrolase fold AMIS_31960 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMIS_31990 PF00144 Beta-lactamase AMIS_320 PF04264 YceI-like domain AMIS_32000 PF00005 ABC transporter AMIS_32000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_32010 PF00005 ABC transporter AMIS_32010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_32040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIS_32100 PF00155 Aminotransferase class I and II AMIS_32110 PF01979 Amidohydrolase family AMIS_32120 PF01323 DSBA-like thioredoxin domain AMIS_32130 PF01037 Lrp/AsnC ligand binding domain AMIS_32150 PF01761 3-dehydroquinate synthase AMIS_32160 PF13419 Haloacid dehalogenase-like hydrolase AMIS_32200 PF00534 Glycosyl transferases group 1 AMIS_32210 PF00106 short chain dehydrogenase AMIS_32220 PF02585 GlcNAc-PI de-N-acetylase AMIS_32230 PF00107 Zinc-binding dehydrogenase AMIS_32230 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_32240 PF00067 Cytochrome P450 AMIS_32260 PF01494 FAD binding domain AMIS_32280 PF07690 Major Facilitator Superfamily AMIS_32290 PF17760 UvrA interaction domain AMIS_32290 PF17755 UvrA DNA-binding domain AMIS_3230 PF00271 Helicase conserved C-terminal domain AMIS_3230 PF00270 DEAD/DEAH box helicase AMIS_3230 PF09369 Domain of unknown function (DUF1998) AMIS_32320 PF00501 AMP-binding enzyme AMIS_32320 PF13193 AMP-binding enzyme C-terminal domain AMIS_32320 PF00668 Condensation domain AMIS_32320 PF00550 Phosphopantetheine attachment site AMIS_32330 PF00668 Condensation domain AMIS_32330 PF00550 Phosphopantetheine attachment site AMIS_32330 PF00501 AMP-binding enzyme AMIS_32330 PF13193 AMP-binding enzyme C-terminal domain AMIS_32330 PF07993 Male sterility protein AMIS_32360 PF03621 MbtH-like protein AMIS_32370 PF01565 FAD binding domain AMIS_32370 PF08031 Berberine and berberine like AMIS_3240 PF01740 STAS domain AMIS_32420 PF00550 Phosphopantetheine attachment site AMIS_32420 PF00668 Condensation domain AMIS_32420 PF00975 Thioesterase domain AMIS_32420 PF13193 AMP-binding enzyme C-terminal domain AMIS_32420 PF00501 AMP-binding enzyme AMIS_32430 PF04820 Tryptophan halogenase AMIS_32440 PF00394 Multicopper oxidase AMIS_32440 PF07731 Multicopper oxidase AMIS_32440 PF07732 Multicopper oxidase AMIS_32450 PF00999 Sodium/hydrogen exchanger family AMIS_32470 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_32490 PF01547 Bacterial extracellular solute-binding protein AMIS_32500 PF00331 Glycosyl hydrolase family 10 AMIS_32500 PF00652 Ricin-type beta-trefoil lectin domain AMIS_32520 PF00376 MerR family regulatory protein AMIS_32520 PF09278 MerR, DNA binding AMIS_32550 PF08543 Phosphomethylpyrimidine kinase AMIS_32580 PF00440 Bacterial regulatory proteins, tetR family AMIS_32580 PF02909 Tetracyclin repressor-like, C-terminal domain AMIS_3260 PF03030 Inorganic H+ pyrophosphatase AMIS_32600 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_32600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_32600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_32620 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_32620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_32620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_32690 PF12833 Helix-turn-helix domain AMIS_32770 PF01209 ubiE/COQ5 methyltransferase family AMIS_32830 PF00501 AMP-binding enzyme AMIS_32830 PF13193 AMP-binding enzyme C-terminal domain AMIS_32840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_32840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_32840 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_32850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_32850 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_32850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_32860 PF00171 Aldehyde dehydrogenase family AMIS_32870 PF00067 Cytochrome P450 AMIS_32890 PF07690 Major Facilitator Superfamily AMIS_3290 PF13368 Topoisomerase C-terminal repeat AMIS_3290 PF01131 DNA topoisomerase AMIS_3290 PF01751 Toprim domain AMIS_32900 PF05199 GMC oxidoreductase AMIS_32900 PF00732 GMC oxidoreductase AMIS_32920 PF01654 Cytochrome bd terminal oxidase subunit I AMIS_32940 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMIS_32940 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMIS_32960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIS_32960 PF01411 tRNA synthetases class II (A) AMIS_3300 PF04030 D-arabinono-1,4-lactone oxidase AMIS_3300 PF01565 FAD binding domain AMIS_33010 PF13411 MerR HTH family regulatory protein AMIS_33010 PF07739 TipAS antibiotic-recognition domain AMIS_33020 PF01061 ABC-2 type transporter AMIS_33030 PF13732 Domain of unknown function (DUF4162) AMIS_33030 PF00005 ABC transporter AMIS_33060 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_33060 PF00107 Zinc-binding dehydrogenase AMIS_33090 PF00440 Bacterial regulatory proteins, tetR family AMIS_33090 PF17754 MftR C-terminal domain AMIS_3310 PF17925 Tetracyclin repressor-like, C-terminal domain AMIS_3310 PF00440 Bacterial regulatory proteins, tetR family AMIS_33100 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_33100 PF00107 Zinc-binding dehydrogenase AMIS_33100 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_33100 PF00698 Acyl transferase domain AMIS_33100 PF14765 Polyketide synthase dehydratase AMIS_33100 PF08659 KR domain AMIS_33100 PF00550 Phosphopantetheine attachment site AMIS_33100 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_33100 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_33150 PF04542 Sigma-70 region 2 AMIS_33150 PF08281 Sigma-70, region 4 AMIS_33150 PF12680 SnoaL-like domain AMIS_33180 PF08448 PAS fold AMIS_33180 PF00072 Response regulator receiver domain AMIS_33180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_33180 PF00512 His Kinase A (phospho-acceptor) domain AMIS_33180 PF13188 PAS domain AMIS_33200 PF00582 Universal stress protein family AMIS_33220 PF03631 Virulence factor BrkB AMIS_33240 PF03795 YCII-related domain AMIS_33290 PF00255 Glutathione peroxidase AMIS_3330 PF02223 Thymidylate kinase AMIS_33300 PF03099 Biotin/lipoate A/B protein ligase family AMIS_33330 PF03167 Uracil DNA glycosylase superfamily AMIS_33360 PF01276 Orn/Lys/Arg decarboxylase, major domain AMIS_33360 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AMIS_33370 PF00005 ABC transporter AMIS_33380 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_33390 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIS_3340 PF12169 DNA polymerase III subunits gamma and tau domain III AMIS_33410 PF00578 AhpC/TSA family AMIS_33480 PF00457 Glycosyl hydrolases family 11 AMIS_33500 PF00196 Bacterial regulatory proteins, luxR family AMIS_33540 PF12833 Helix-turn-helix domain AMIS_33570 PF00892 EamA-like transporter family AMIS_33580 PF00155 Aminotransferase class I and II AMIS_33620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_33620 PF07730 Histidine kinase AMIS_33630 PF00196 Bacterial regulatory proteins, luxR family AMIS_33630 PF00072 Response regulator receiver domain AMIS_33640 PF00005 ABC transporter AMIS_33640 PF02687 FtsX-like permease family AMIS_33640 PF12704 MacB-like periplasmic core domain AMIS_33670 PF02016 LD-carboxypeptidase N-terminal domain AMIS_33670 PF17676 LD-carboxypeptidase C-terminal domain AMIS_33680 PF00056 lactate/malate dehydrogenase, NAD binding domain AMIS_33680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMIS_33690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIS_33690 PF00364 Biotin-requiring enzyme AMIS_33690 PF02817 e3 binding domain AMIS_33700 PF02779 Transketolase, pyrimidine binding domain AMIS_33700 PF02780 Transketolase, C-terminal domain AMIS_33710 PF00676 Dehydrogenase E1 component AMIS_33720 PF01037 Lrp/AsnC ligand binding domain AMIS_33720 PF13404 AsnC-type helix-turn-helix domain AMIS_33730 PF00155 Aminotransferase class I and II AMIS_33740 PF00155 Aminotransferase class I and II AMIS_33740 PF00392 Bacterial regulatory proteins, gntR family AMIS_33880 PF00512 His Kinase A (phospho-acceptor) domain AMIS_33880 PF02743 Cache domain AMIS_33880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_33890 PF00293 NUDIX domain AMIS_3390 PF04468 PSP1 C-terminal conserved region AMIS_33970 PF18255 DNA processing protein A sterile alpha motif domain AMIS_33970 PF02481 DNA recombination-mediator protein A AMIS_34000 PF07690 Major Facilitator Superfamily AMIS_34010 PF08281 Sigma-70, region 4 AMIS_34010 PF04542 Sigma-70 region 2 AMIS_3410 PF00589 Phage integrase family AMIS_3410 PF02899 Phage integrase, N-terminal SAM-like domain AMIS_34110 PF02136 Nuclear transport factor 2 (NTF2) domain AMIS_34120 PF01546 Peptidase family M20/M25/M40 AMIS_34120 PF07687 Peptidase dimerisation domain AMIS_34140 PF00266 Aminotransferase class-V AMIS_34150 PF03707 Bacterial signalling protein N terminal repeat AMIS_34150 PF00563 EAL domain AMIS_34150 PF00990 Diguanylate cyclase, GGDEF domain AMIS_34160 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMIS_34160 PF07971 Glycosyl hydrolase family 92 AMIS_34210 PF13350 Tyrosine phosphatase family AMIS_34220 PF00069 Protein kinase domain AMIS_34220 PF03793 PASTA domain AMIS_34230 PF00196 Bacterial regulatory proteins, luxR family AMIS_34230 PF00072 Response regulator receiver domain AMIS_34240 PF07730 Histidine kinase AMIS_34240 PF17200 Single Cache domain 2 AMIS_34270 PF00296 Luciferase-like monooxygenase AMIS_34430 PF01425 Amidase AMIS_34460 PF00392 Bacterial regulatory proteins, gntR family AMIS_34460 PF07729 FCD domain AMIS_34470 PF00356 Bacterial regulatory proteins, lacI family AMIS_34500 PF01738 Dienelactone hydrolase family AMIS_34510 PF01139 tRNA-splicing ligase RtcB AMIS_34530 PF00753 Metallo-beta-lactamase superfamily AMIS_34540 PF12681 Glyoxalase-like domain AMIS_34560 PF00561 alpha/beta hydrolase fold AMIS_34590 PF07690 Major Facilitator Superfamily AMIS_34600 PF00440 Bacterial regulatory proteins, tetR family AMIS_34610 PF14602 Hexapeptide repeat of succinyl-transferase AMIS_34610 PF12464 Maltose acetyltransferase AMIS_34620 PF00596 Class II Aldolase and Adducin N-terminal domain AMIS_34630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_34630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_34640 PF02754 Cysteine-rich domain AMIS_34650 PF02589 LUD domain AMIS_34650 PF11870 Domain of unknown function (DUF3390) AMIS_34650 PF13183 4Fe-4S dicluster domain AMIS_34660 PF02589 LUD domain AMIS_34690 PF07228 Stage II sporulation protein E (SpoIIE) AMIS_34690 PF00672 HAMP domain AMIS_34700 PF04055 Radical SAM superfamily AMIS_34710 PF00743 Flavin-binding monooxygenase-like AMIS_34730 PF00144 Beta-lactamase AMIS_34740 PF00891 O-methyltransferase domain AMIS_34750 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMIS_34790 PF00196 Bacterial regulatory proteins, luxR family AMIS_34790 PF00072 Response regulator receiver domain AMIS_34800 PF07730 Histidine kinase AMIS_34810 PF00005 ABC transporter AMIS_34840 PF03176 MMPL family AMIS_34860 PF00583 Acetyltransferase (GNAT) family AMIS_34900 PF01593 Flavin containing amine oxidoreductase AMIS_34910 PF00892 EamA-like transporter family AMIS_34960 PF00723 Glycosyl hydrolases family 15 AMIS_34970 PF01980 tRNA-methyltransferase O AMIS_34980 PF00440 Bacterial regulatory proteins, tetR family AMIS_34990 PF01494 FAD binding domain AMIS_35000 PF11606 Family 31 carbohydrate binding protein AMIS_35020 PF01144 Coenzyme A transferase AMIS_35030 PF01144 Coenzyme A transferase AMIS_35050 PF00356 Bacterial regulatory proteins, lacI family AMIS_35090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMIS_35090 PF00384 Molybdopterin oxidoreductase AMIS_35090 PF01568 Molydopterin dinucleotide binding domain AMIS_35140 PF00942 Cellulose binding domain AMIS_35140 PF00041 Fibronectin type III domain AMIS_35140 PF00759 Glycosyl hydrolase family 9 AMIS_35140 PF00553 Cellulose binding domain AMIS_35150 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_35160 PF01546 Peptidase family M20/M25/M40 AMIS_35160 PF07687 Peptidase dimerisation domain AMIS_35200 PF00196 Bacterial regulatory proteins, luxR family AMIS_35210 PF01061 ABC-2 type transporter AMIS_35220 PF00005 ABC transporter AMIS_35220 PF13732 Domain of unknown function (DUF4162) AMIS_35280 PF03795 YCII-related domain AMIS_35290 PF04542 Sigma-70 region 2 AMIS_35290 PF08281 Sigma-70, region 4 AMIS_3530 PF01965 DJ-1/PfpI family AMIS_35340 PF00486 Transcriptional regulatory protein, C terminal AMIS_35340 PF00931 NB-ARC domain AMIS_35340 PF03704 Bacterial transcriptional activator domain AMIS_35360 PF01027 Inhibitor of apoptosis-promoting Bax1 AMIS_35390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_35390 PF01627 Hpt domain AMIS_35390 PF00072 Response regulator receiver domain AMIS_35390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMIS_35390 PF00672 HAMP domain AMIS_35390 PF00512 His Kinase A (phospho-acceptor) domain AMIS_3540 PF07690 Major Facilitator Superfamily AMIS_35400 PF00106 short chain dehydrogenase AMIS_35410 PF01047 MarR family AMIS_35450 PF00005 ABC transporter AMIS_35450 PF00664 ABC transporter transmembrane region AMIS_35460 PF00664 ABC transporter transmembrane region AMIS_35460 PF00005 ABC transporter AMIS_35470 PF00005 ABC transporter AMIS_35480 PF01032 FecCD transport family AMIS_35490 PF01032 FecCD transport family AMIS_3550 PF00293 NUDIX domain AMIS_35530 PF08448 PAS fold AMIS_35530 PF13188 PAS domain AMIS_35530 PF00072 Response regulator receiver domain AMIS_35530 PF00512 His Kinase A (phospho-acceptor) domain AMIS_35530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_3560 PF02735 Ku70/Ku80 beta-barrel domain AMIS_35620 PF01593 Flavin containing amine oxidoreductase AMIS_35630 PF00248 Aldo/keto reductase family AMIS_35660 PF01638 HxlR-like helix-turn-helix AMIS_35670 PF00106 short chain dehydrogenase AMIS_3570 PF01068 ATP dependent DNA ligase domain AMIS_3570 PF04679 ATP dependent DNA ligase C terminal region AMIS_3570 PF13298 DNA polymerase Ligase (LigD) AMIS_35700 PF00440 Bacterial regulatory proteins, tetR family AMIS_35710 PF07690 Major Facilitator Superfamily AMIS_35720 PF01522 Polysaccharide deacetylase AMIS_35720 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AMIS_3580 PF13298 DNA polymerase Ligase (LigD) AMIS_3580 PF01068 ATP dependent DNA ligase domain AMIS_3580 PF04679 ATP dependent DNA ligase C terminal region AMIS_35840 PF01022 Bacterial regulatory protein, arsR family AMIS_35870 PF00196 Bacterial regulatory proteins, luxR family AMIS_35870 PF00072 Response regulator receiver domain AMIS_35880 PF07730 Histidine kinase AMIS_35910 PF07732 Multicopper oxidase AMIS_35910 PF07731 Multicopper oxidase AMIS_35910 PF00394 Multicopper oxidase AMIS_35960 PF07691 PA14 domain AMIS_35960 PF14310 Fibronectin type III-like domain AMIS_35960 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_35960 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_35980 PF03816 Cell envelope-related transcriptional attenuator domain AMIS_36040 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMIS_36040 PF00391 PEP-utilising enzyme, mobile domain AMIS_36060 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_36060 PF00107 Zinc-binding dehydrogenase AMIS_36070 PF00512 His Kinase A (phospho-acceptor) domain AMIS_36070 PF00072 Response regulator receiver domain AMIS_36070 PF01627 Hpt domain AMIS_36070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_36070 PF00672 HAMP domain AMIS_36070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMIS_36080 PF00486 Transcriptional regulatory protein, C terminal AMIS_36080 PF00072 Response regulator receiver domain AMIS_36100 PF00072 Response regulator receiver domain AMIS_36100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMIS_36100 PF01627 Hpt domain AMIS_36100 PF00512 His Kinase A (phospho-acceptor) domain AMIS_36100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_36100 PF00672 HAMP domain AMIS_36130 PF02687 FtsX-like permease family AMIS_36130 PF00005 ABC transporter AMIS_36130 PF12704 MacB-like periplasmic core domain AMIS_36140 PF00005 ABC transporter AMIS_36140 PF02687 FtsX-like permease family AMIS_36140 PF12704 MacB-like periplasmic core domain AMIS_36170 PF01546 Peptidase family M20/M25/M40 AMIS_36170 PF07687 Peptidase dimerisation domain AMIS_36200 PF13378 Enolase C-terminal domain-like AMIS_36200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIS_36290 PF00665 Integrase core domain AMIS_36310 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_36330 PF00561 alpha/beta hydrolase fold AMIS_36360 PF00202 Aminotransferase class-III AMIS_3640 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_36400 PF13520 Amino acid permease AMIS_36460 PF04389 Peptidase family M28 AMIS_36460 PF01483 Proprotein convertase P-domain AMIS_36470 PF00561 alpha/beta hydrolase fold AMIS_36480 PF00005 ABC transporter AMIS_36490 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_3650 PF00290 Tryptophan synthase alpha chain AMIS_36500 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_36520 PF09339 IclR helix-turn-helix domain AMIS_36520 PF01614 Bacterial transcriptional regulator AMIS_36530 PF00990 Diguanylate cyclase, GGDEF domain AMIS_36530 PF08447 PAS fold AMIS_36530 PF08448 PAS fold AMIS_36530 PF00563 EAL domain AMIS_36540 PF00440 Bacterial regulatory proteins, tetR family AMIS_36550 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) AMIS_36650 PF01494 FAD binding domain AMIS_36660 PF01614 Bacterial transcriptional regulator AMIS_36660 PF09339 IclR helix-turn-helix domain AMIS_36670 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMIS_36670 PF00775 Dioxygenase AMIS_36680 PF00775 Dioxygenase AMIS_36690 PF10397 Adenylosuccinate lyase C-terminus AMIS_36690 PF00206 Lyase AMIS_3670 PF00271 Helicase conserved C-terminal domain AMIS_3670 PF04851 Type III restriction enzyme, res subunit AMIS_36700 PF12146 Serine aminopeptidase, S33 AMIS_36720 PF00553 Cellulose binding domain AMIS_36720 PF01341 Glycosyl hydrolases family 6 AMIS_36780 PF03466 LysR substrate binding domain AMIS_36780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_36790 PF01494 FAD binding domain AMIS_36810 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIS_36820 PF01738 Dienelactone hydrolase family AMIS_36880 PF00072 Response regulator receiver domain AMIS_36880 PF13188 PAS domain AMIS_36880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_36880 PF00512 His Kinase A (phospho-acceptor) domain AMIS_36880 PF08448 PAS fold AMIS_36890 PF00723 Glycosyl hydrolases family 15 AMIS_36890 PF09137 Glucodextranase, domain N AMIS_36950 PF01209 ubiE/COQ5 methyltransferase family AMIS_36990 PF17760 UvrA interaction domain AMIS_36990 PF00005 ABC transporter AMIS_36990 PF17755 UvrA DNA-binding domain AMIS_3700 PF13419 Haloacid dehalogenase-like hydrolase AMIS_37010 PF00072 Response regulator receiver domain AMIS_37010 PF00486 Transcriptional regulatory protein, C terminal AMIS_37020 PF08021 Siderophore-interacting FAD-binding domain AMIS_37020 PF04954 Siderophore-interacting protein AMIS_37060 PF03466 LysR substrate binding domain AMIS_37060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_37080 PF00120 Glutamine synthetase, catalytic domain AMIS_37080 PF03951 Glutamine synthetase, beta-Grasp domain AMIS_3710 PF00313 'Cold-shock' DNA-binding domain AMIS_37100 PF01740 STAS domain AMIS_37130 PF07497 Rho termination factor, RNA-binding domain AMIS_37130 PF07498 Rho termination factor, N-terminal domain AMIS_37130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIS_37180 PF00440 Bacterial regulatory proteins, tetR family AMIS_37180 PF02909 Tetracyclin repressor-like, C-terminal domain AMIS_37190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_37190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_37190 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_3720 PF02621 Menaquinone biosynthesis AMIS_37210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_37210 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_37210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_37240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIS_37240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_37250 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_37250 PF14310 Fibronectin type III-like domain AMIS_37250 PF07691 PA14 domain AMIS_37250 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_37260 PF00356 Bacterial regulatory proteins, lacI family AMIS_37280 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_37290 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_37300 PF01055 Glycosyl hydrolases family 31 AMIS_37300 PF13802 Galactose mutarotase-like AMIS_37330 PF09364 XFP N-terminal domain AMIS_37330 PF09363 XFP C-terminal domain AMIS_37330 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AMIS_37350 PF00005 ABC transporter AMIS_37380 PF01891 Cobalt uptake substrate-specific transmembrane region AMIS_37380 PF13190 PDGLE domain AMIS_37400 PF13492 GAF domain AMIS_37400 PF07730 Histidine kinase AMIS_37400 PF13185 GAF domain AMIS_37400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_37410 PF00196 Bacterial regulatory proteins, luxR family AMIS_37410 PF00072 Response regulator receiver domain AMIS_37430 PF00672 HAMP domain AMIS_37430 PF02743 Cache domain AMIS_37430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_37440 PF00989 PAS fold AMIS_37440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_37440 PF00512 His Kinase A (phospho-acceptor) domain AMIS_37440 PF16736 Single Cache-like AMIS_37450 PF00158 Sigma-54 interaction domain AMIS_37450 PF00072 Response regulator receiver domain AMIS_37470 PF01261 Xylose isomerase-like TIM barrel AMIS_37480 PF02653 Branched-chain amino acid transport system / permease component AMIS_37490 PF02653 Branched-chain amino acid transport system / permease component AMIS_3750 PF00232 Glycosyl hydrolase family 1 AMIS_37500 PF00005 ABC transporter AMIS_37510 PF13407 Periplasmic binding protein domain AMIS_37540 PF00459 Inositol monophosphatase family AMIS_37550 PF03793 PASTA domain AMIS_37550 PF00069 Protein kinase domain AMIS_37580 PF00171 Aldehyde dehydrogenase family AMIS_37590 PF00202 Aminotransferase class-III AMIS_37600 PF00171 Aldehyde dehydrogenase family AMIS_37610 PF00005 ABC transporter AMIS_37610 PF08402 TOBE domain AMIS_37630 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_37640 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_37650 PF00202 Aminotransferase class-III AMIS_37670 PF00072 Response regulator receiver domain AMIS_37670 PF00486 Transcriptional regulatory protein, C terminal AMIS_37680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_37680 PF00512 His Kinase A (phospho-acceptor) domain AMIS_37680 PF00672 HAMP domain AMIS_37690 PF01266 FAD dependent oxidoreductase AMIS_37700 PF01037 Lrp/AsnC ligand binding domain AMIS_37710 PF00202 Aminotransferase class-III AMIS_37720 PF00171 Aldehyde dehydrogenase family AMIS_37730 PF13426 PAS domain AMIS_37730 PF07228 Stage II sporulation protein E (SpoIIE) AMIS_37740 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_37740 PF14310 Fibronectin type III-like domain AMIS_37740 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_37760 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_37770 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_37780 PF00356 Bacterial regulatory proteins, lacI family AMIS_3780 PF01048 Phosphorylase superfamily AMIS_37820 PF00296 Luciferase-like monooxygenase AMIS_37830 PF02541 Ppx/GppA phosphatase family AMIS_37840 PF03781 Sulfatase-modifying factor enzyme 1 AMIS_37850 PF00011 Hsp20/alpha crystallin family AMIS_37880 PF00199 Catalase AMIS_37880 PF18011 C-terminal domain found in long catalases AMIS_37880 PF06628 Catalase-related immune-responsive AMIS_37890 PF03576 Peptidase family S58 AMIS_3790 PF07690 Major Facilitator Superfamily AMIS_37900 PF00296 Luciferase-like monooxygenase AMIS_37920 PF03129 Anticodon binding domain AMIS_37920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIS_37920 PF04073 Aminoacyl-tRNA editing domain AMIS_37930 PF05368 NmrA-like family AMIS_37940 PF01638 HxlR-like helix-turn-helix AMIS_37970 PF00990 Diguanylate cyclase, GGDEF domain AMIS_37970 PF07694 5TMR of 5TMR-LYT AMIS_37980 PF02515 CoA-transferase family III AMIS_37990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_37990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_37990 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_3800 PF11228 Protein of unknown function (DUF3027) AMIS_38010 PF13193 AMP-binding enzyme C-terminal domain AMIS_38010 PF00501 AMP-binding enzyme AMIS_38010 PF16177 Acetyl-coenzyme A synthetase N-terminus AMIS_38050 PF00296 Luciferase-like monooxygenase AMIS_38060 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_38060 PF14765 Polyketide synthase dehydratase AMIS_38060 PF00698 Acyl transferase domain AMIS_38060 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_38060 PF00550 Phosphopantetheine attachment site AMIS_38060 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_38060 PF08659 KR domain AMIS_38060 PF08990 Erythronolide synthase docking AMIS_38060 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_38080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_38080 PF03466 LysR substrate binding domain AMIS_38110 PF00005 ABC transporter AMIS_38120 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_38190 PF00128 Alpha amylase, catalytic domain AMIS_3820 PF00860 Permease family AMIS_38200 PF00356 Bacterial regulatory proteins, lacI family AMIS_38280 PF00296 Luciferase-like monooxygenase AMIS_38290 PF03176 MMPL family AMIS_3830 PF01047 MarR family AMIS_38310 PF00664 ABC transporter transmembrane region AMIS_38310 PF00005 ABC transporter AMIS_38350 PF00881 Nitroreductase family AMIS_38370 PF00285 Citrate synthase, C-terminal domain AMIS_38380 PF00285 Citrate synthase, C-terminal domain AMIS_3840 PF05977 Transmembrane secretion effector AMIS_38400 PF00561 alpha/beta hydrolase fold AMIS_38410 PF00106 short chain dehydrogenase AMIS_38420 PF00743 Flavin-binding monooxygenase-like AMIS_38500 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_38500 PF04324 BFD-like [2Fe-2S] binding domain AMIS_38500 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMIS_38500 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIS_38500 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIS_38510 PF00355 Rieske [2Fe-2S] domain AMIS_38520 PF07690 Major Facilitator Superfamily AMIS_38560 PF00356 Bacterial regulatory proteins, lacI family AMIS_38570 PF07690 Major Facilitator Superfamily AMIS_38600 PF00990 Diguanylate cyclase, GGDEF domain AMIS_38600 PF08448 PAS fold AMIS_38620 PF02687 FtsX-like permease family AMIS_38620 PF12704 MacB-like periplasmic core domain AMIS_38620 PF00005 ABC transporter AMIS_38630 PF02687 FtsX-like permease family AMIS_38630 PF12704 MacB-like periplasmic core domain AMIS_38650 PF00106 short chain dehydrogenase AMIS_38670 PF00106 short chain dehydrogenase AMIS_38720 PF00106 short chain dehydrogenase AMIS_38740 PF00356 Bacterial regulatory proteins, lacI family AMIS_38790 PF00722 Glycosyl hydrolases family 16 AMIS_3880 PF00266 Aminotransferase class-V AMIS_38800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_38810 PF00356 Bacterial regulatory proteins, lacI family AMIS_38820 PF00155 Aminotransferase class I and II AMIS_38840 PF01037 Lrp/AsnC ligand binding domain AMIS_38880 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIS_38880 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIS_38890 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMIS_38890 PF00941 FAD binding domain in molybdopterin dehydrogenase AMIS_3890 PF00285 Citrate synthase, C-terminal domain AMIS_38900 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_38900 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMIS_38900 PF01799 [2Fe-2S] binding domain AMIS_38970 PF03466 LysR substrate binding domain AMIS_38970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_38980 PF16363 GDP-mannose 4,6 dehydratase AMIS_38990 PF00041 Fibronectin type III domain AMIS_38990 PF00150 Cellulase (glycosyl hydrolase family 5) AMIS_38990 PF00553 Cellulose binding domain AMIS_3900 PF01243 Pyridoxamine 5'-phosphate oxidase AMIS_3900 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMIS_39010 PF13823 Alcohol dehydrogenase GroES-associated AMIS_39010 PF00107 Zinc-binding dehydrogenase AMIS_39010 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_39030 PF07690 Major Facilitator Superfamily AMIS_39050 PF00440 Bacterial regulatory proteins, tetR family AMIS_39050 PF16859 Tetracyclin repressor-like, C-terminal domain AMIS_39060 PF02096 60Kd inner membrane protein AMIS_39070 PF07690 Major Facilitator Superfamily AMIS_39080 PF01047 MarR family AMIS_3910 PF07690 Major Facilitator Superfamily AMIS_39100 PF12697 Alpha/beta hydrolase family AMIS_39110 PF00265 Thymidine kinase AMIS_39120 PF00294 pfkB family carbohydrate kinase AMIS_39130 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIS_39160 PF00144 Beta-lactamase AMIS_3920 PF01263 Aldose 1-epimerase AMIS_39200 PF05977 Transmembrane secretion effector AMIS_39220 PF07730 Histidine kinase AMIS_39220 PF05231 MASE1 AMIS_39220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_39230 PF00072 Response regulator receiver domain AMIS_39230 PF00196 Bacterial regulatory proteins, luxR family AMIS_39240 PF13426 PAS domain AMIS_39240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_39240 PF00072 Response regulator receiver domain AMIS_39240 PF08448 PAS fold AMIS_39240 PF00512 His Kinase A (phospho-acceptor) domain AMIS_39270 PF00107 Zinc-binding dehydrogenase AMIS_39270 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_39280 PF00196 Bacterial regulatory proteins, luxR family AMIS_39300 PF00211 Adenylate and Guanylate cyclase catalytic domain AMIS_39300 PF13191 AAA ATPase domain AMIS_39310 PF00196 Bacterial regulatory proteins, luxR family AMIS_39360 PF01161 Phosphatidylethanolamine-binding protein AMIS_39380 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIS_39390 PF01209 ubiE/COQ5 methyltransferase family AMIS_39400 PF00990 Diguanylate cyclase, GGDEF domain AMIS_39400 PF00563 EAL domain AMIS_39400 PF03707 Bacterial signalling protein N terminal repeat AMIS_39430 PF00296 Luciferase-like monooxygenase AMIS_39440 PF08448 PAS fold AMIS_39440 PF13426 PAS domain AMIS_39440 PF08447 PAS fold AMIS_39440 PF00563 EAL domain AMIS_39440 PF05231 MASE1 AMIS_39440 PF00990 Diguanylate cyclase, GGDEF domain AMIS_39450 PF00440 Bacterial regulatory proteins, tetR family AMIS_39450 PF02909 Tetracyclin repressor-like, C-terminal domain AMIS_39460 PF07690 Major Facilitator Superfamily AMIS_39540 PF00378 Enoyl-CoA hydratase/isomerase AMIS_39570 PF07859 alpha/beta hydrolase fold AMIS_39580 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMIS_39580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIS_39580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIS_39590 PF02233 NAD(P) transhydrogenase beta subunit AMIS_39600 PF18698 Histidine kinase sensor domain AMIS_39600 PF00989 PAS fold AMIS_39600 PF00512 His Kinase A (phospho-acceptor) domain AMIS_39600 PF00672 HAMP domain AMIS_39600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_39610 PF00296 Luciferase-like monooxygenase AMIS_39630 PF00005 ABC transporter AMIS_39640 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_39660 PF01613 Flavin reductase like domain AMIS_39740 PF00440 Bacterial regulatory proteins, tetR family AMIS_39740 PF13977 BetI-type transcriptional repressor, C-terminal AMIS_39750 PF00391 PEP-utilising enzyme, mobile domain AMIS_39750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMIS_39760 PF01546 Peptidase family M20/M25/M40 AMIS_39760 PF07687 Peptidase dimerisation domain AMIS_39770 PF12833 Helix-turn-helix domain AMIS_39770 PF06445 GyrI-like small molecule binding domain AMIS_3980 PF00005 ABC transporter AMIS_3980 PF17912 MalK OB fold domain AMIS_39800 PF00905 Penicillin binding protein transpeptidase domain AMIS_39800 PF00912 Transglycosylase AMIS_39810 PF01494 FAD binding domain AMIS_39820 PF07690 Major Facilitator Superfamily AMIS_39830 PF00356 Bacterial regulatory proteins, lacI family AMIS_39850 PF04616 Glycosyl hydrolases family 43 AMIS_39850 PF03422 Carbohydrate binding module (family 6) AMIS_39860 PF07532 Bacterial Ig-like domain (group 4) AMIS_39870 PF17871 AAA lid domain AMIS_39870 PF07724 AAA domain (Cdc48 subfamily) AMIS_39870 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_39870 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_39870 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_39880 PF01266 FAD dependent oxidoreductase AMIS_39920 PF01580 FtsK/SpoIIIE family AMIS_39980 PF00378 Enoyl-CoA hydratase/isomerase AMIS_39990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIS_39990 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_40 PF02463 RecF/RecN/SMC N terminal domain AMIS_400 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMIS_4000 PF13419 Haloacid dehalogenase-like hydrolase AMIS_40000 PF00704 Glycosyl hydrolases family 18 AMIS_40000 PF00041 Fibronectin type III domain AMIS_40000 PF02018 Carbohydrate binding domain AMIS_40020 PF00392 Bacterial regulatory proteins, gntR family AMIS_40020 PF07729 FCD domain AMIS_40030 PF13183 4Fe-4S dicluster domain AMIS_40030 PF01565 FAD binding domain AMIS_40030 PF02913 FAD linked oxidases, C-terminal domain AMIS_40040 PF00743 Flavin-binding monooxygenase-like AMIS_40050 PF16995 Transmembrane region of lysyl-tRNA synthetase AMIS_40050 PF00152 tRNA synthetases class II (D, K and N) AMIS_40050 PF01336 OB-fold nucleic acid binding domain AMIS_40050 PF09924 Uncharacterised conserved protein (DUF2156) AMIS_4010 PF03636 Glycosyl hydrolase family 65, N-terminal domain AMIS_4010 PF03632 Glycosyl hydrolase family 65 central catalytic domain AMIS_4010 PF03633 Glycosyl hydrolase family 65, C-terminal domain AMIS_40110 PF01568 Molydopterin dinucleotide binding domain AMIS_40110 PF00384 Molybdopterin oxidoreductase AMIS_40120 PF13247 4Fe-4S dicluster domain AMIS_40120 PF14711 Respiratory nitrate reductase beta C-terminal AMIS_40130 PF02613 Nitrate reductase delta subunit AMIS_40140 PF02665 Nitrate reductase gamma subunit AMIS_40190 PF00128 Alpha amylase, catalytic domain AMIS_40190 PF02806 Alpha amylase, C-terminal all-beta domain AMIS_40190 PF03714 Bacterial pullanase-associated domain AMIS_40200 PF00012 Hsp70 protein AMIS_40240 PF00487 Fatty acid desaturase AMIS_40250 PF00682 HMGL-like AMIS_40270 PF18158 Adaptive response protein AidB N-terminal domain AMIS_40270 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_40270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_40290 PF16347 Domain of unknown function (DUF4976) AMIS_40290 PF00884 Sulfatase AMIS_40300 PF00563 EAL domain AMIS_40300 PF00990 Diguanylate cyclase, GGDEF domain AMIS_40300 PF03707 Bacterial signalling protein N terminal repeat AMIS_40300 PF13188 PAS domain AMIS_40320 PF00672 HAMP domain AMIS_40320 PF00512 His Kinase A (phospho-acceptor) domain AMIS_40320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_40330 PF00486 Transcriptional regulatory protein, C terminal AMIS_40330 PF00072 Response regulator receiver domain AMIS_40360 PF01341 Glycosyl hydrolases family 6 AMIS_40360 PF00553 Cellulose binding domain AMIS_40370 PF00480 ROK family AMIS_40380 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMIS_4040 PF01476 LysM domain AMIS_4040 PF00005 ABC transporter AMIS_40410 PF00491 Arginase family AMIS_40420 PF00150 Cellulase (glycosyl hydrolase family 5) AMIS_40420 PF02013 Cellulose or protein binding domain AMIS_40450 PF00480 ROK family AMIS_40530 PF12697 Alpha/beta hydrolase family AMIS_40550 PF00072 Response regulator receiver domain AMIS_40590 PF17863 AAA lid domain AMIS_40590 PF07726 ATPase family associated with various cellular activities (AAA) AMIS_4060 PF00440 Bacterial regulatory proteins, tetR family AMIS_4060 PF16859 Tetracyclin repressor-like, C-terminal domain AMIS_40610 PF00561 alpha/beta hydrolase fold AMIS_40680 PF03422 Carbohydrate binding module (family 6) AMIS_40680 PF04616 Glycosyl hydrolases family 43 AMIS_40700 PF01522 Polysaccharide deacetylase AMIS_40710 PF00989 PAS fold AMIS_40710 PF00512 His Kinase A (phospho-acceptor) domain AMIS_40710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_40710 PF16736 Single Cache-like AMIS_40720 PF00107 Zinc-binding dehydrogenase AMIS_40720 PF13823 Alcohol dehydrogenase GroES-associated AMIS_40720 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_40750 PF00440 Bacterial regulatory proteins, tetR family AMIS_40750 PF16925 Tetracyclin repressor-like, C-terminal domain AMIS_40790 PF13977 BetI-type transcriptional repressor, C-terminal AMIS_40790 PF00440 Bacterial regulatory proteins, tetR family AMIS_40850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_40850 PF03466 LysR substrate binding domain AMIS_40860 PF00892 EamA-like transporter family AMIS_40960 PF08241 Methyltransferase domain AMIS_410 PF00498 FHA domain AMIS_410 PF12401 Protein of unknown function (DUF2662) AMIS_410 PF12401 Protein of unknown function (DUF2662) AMIS_410 PF00498 FHA domain AMIS_41070 PF06441 Epoxide hydrolase N terminus AMIS_4110 PF04545 Sigma-70, region 4 AMIS_4110 PF04542 Sigma-70 region 2 AMIS_41100 PF00701 Dihydrodipicolinate synthetase family AMIS_41110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_41110 PF03466 LysR substrate binding domain AMIS_41130 PF02899 Phage integrase, N-terminal SAM-like domain AMIS_41130 PF00589 Phage integrase family AMIS_41160 PF05661 Protein of unknown function (DUF808) AMIS_41180 PF00391 PEP-utilising enzyme, mobile domain AMIS_41180 PF02896 PEP-utilising enzyme, TIM barrel domain AMIS_41180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMIS_41200 PF00005 ABC transporter AMIS_41240 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_41270 PF00005 ABC transporter AMIS_41290 PF07730 Histidine kinase AMIS_41290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_4130 PF07690 Major Facilitator Superfamily AMIS_41300 PF00196 Bacterial regulatory proteins, luxR family AMIS_41300 PF00072 Response regulator receiver domain AMIS_41310 PF04545 Sigma-70, region 4 AMIS_41310 PF04539 Sigma-70 region 3 AMIS_41310 PF04542 Sigma-70 region 2 AMIS_41350 PF02673 Bacitracin resistance protein BacA AMIS_4140 PF00486 Transcriptional regulatory protein, C terminal AMIS_4140 PF00072 Response regulator receiver domain AMIS_41440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_41440 PF07730 Histidine kinase AMIS_41450 PF00072 Response regulator receiver domain AMIS_41450 PF00196 Bacterial regulatory proteins, luxR family AMIS_41490 PF00350 Dynamin family AMIS_4150 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_4150 PF00107 Zinc-binding dehydrogenase AMIS_41500 PF00350 Dynamin family AMIS_41510 PF00196 Bacterial regulatory proteins, luxR family AMIS_41510 PF00072 Response regulator receiver domain AMIS_41560 PF00893 Small Multidrug Resistance protein AMIS_41600 PF03664 Glycosyl hydrolase family 62 AMIS_41600 PF00652 Ricin-type beta-trefoil lectin domain AMIS_41610 PF00589 Phage integrase family AMIS_41610 PF02899 Phage integrase, N-terminal SAM-like domain AMIS_41660 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_41660 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_41660 PF00550 Phosphopantetheine attachment site AMIS_41660 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_41660 PF08990 Erythronolide synthase docking AMIS_41660 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_41660 PF00698 Acyl transferase domain AMIS_41660 PF14765 Polyketide synthase dehydratase AMIS_41660 PF08659 KR domain AMIS_41680 PF02566 OsmC-like protein AMIS_41690 PF01047 MarR family AMIS_4170 PF02348 Cytidylyltransferase AMIS_41720 PF01925 Sulfite exporter TauE/SafE AMIS_41730 PF03928 Haem-degrading AMIS_41780 PF07690 Major Facilitator Superfamily AMIS_41850 PF00890 FAD binding domain AMIS_41860 PF04183 IucA / IucC family AMIS_41860 PF06276 Ferric iron reductase FhuF-like transporter AMIS_41880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIS_41880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIS_41890 PF08241 Methyltransferase domain AMIS_41960 PF01327 Polypeptide deformylase AMIS_41980 PF04715 Anthranilate synthase component I, N terminal region AMIS_41980 PF00425 chorismate binding enzyme AMIS_420 PF16697 Inner membrane component of T3SS, cytoplasmic domain AMIS_4200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIS_42000 PF02347 Glycine cleavage system P-protein AMIS_42010 PF00248 Aldo/keto reductase family AMIS_42060 PF13340 Putative transposase of IS4/5 family (DUF4096) AMIS_42070 PF03707 Bacterial signalling protein N terminal repeat AMIS_42070 PF00563 EAL domain AMIS_42070 PF00990 Diguanylate cyclase, GGDEF domain AMIS_42090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_42090 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_42090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_4210 PF02719 Polysaccharide biosynthesis protein AMIS_42100 PF00440 Bacterial regulatory proteins, tetR family AMIS_42110 PF00378 Enoyl-CoA hydratase/isomerase AMIS_42120 PF00501 AMP-binding enzyme AMIS_42120 PF13193 AMP-binding enzyme C-terminal domain AMIS_42130 PF05103 DivIVA protein AMIS_42140 PF03466 LysR substrate binding domain AMIS_42140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_42150 PF02540 NAD synthase AMIS_42210 PF05977 Transmembrane secretion effector AMIS_42250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIS_42270 PF00175 Oxidoreductase NAD-binding domain AMIS_42270 PF00970 Oxidoreductase FAD-binding domain AMIS_42270 PF00042 Globin AMIS_42300 PF00072 Response regulator receiver domain AMIS_42300 PF00196 Bacterial regulatory proteins, luxR family AMIS_42340 PF00364 Biotin-requiring enzyme AMIS_42340 PF00561 alpha/beta hydrolase fold AMIS_42370 PF00132 Bacterial transferase hexapeptide (six repeats) AMIS_42370 PF12464 Maltose acetyltransferase AMIS_4240 PF00550 Phosphopantetheine attachment site AMIS_4240 PF00668 Condensation domain AMIS_4240 PF13193 AMP-binding enzyme C-terminal domain AMIS_4240 PF00501 AMP-binding enzyme AMIS_4240 PF00975 Thioesterase domain AMIS_42410 PF01494 FAD binding domain AMIS_42430 PF00155 Aminotransferase class I and II AMIS_42450 PF01494 FAD binding domain AMIS_42530 PF13419 Haloacid dehalogenase-like hydrolase AMIS_42540 PF13649 Methyltransferase domain AMIS_42570 PF07687 Peptidase dimerisation domain AMIS_42570 PF01546 Peptidase family M20/M25/M40 AMIS_42620 PF16656 Purple acid Phosphatase, N-terminal domain AMIS_42620 PF00149 Calcineurin-like phosphoesterase AMIS_42640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_42640 PF03466 LysR substrate binding domain AMIS_42650 PF02803 Thiolase, C-terminal domain AMIS_42650 PF00108 Thiolase, N-terminal domain AMIS_42660 PF01144 Coenzyme A transferase AMIS_42670 PF01144 Coenzyme A transferase AMIS_42680 PF06722 Protein of unknown function (DUF1205) AMIS_42710 PF00106 short chain dehydrogenase AMIS_42720 PF00512 His Kinase A (phospho-acceptor) domain AMIS_42720 PF18698 Histidine kinase sensor domain AMIS_42720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_42720 PF00672 HAMP domain AMIS_42720 PF00989 PAS fold AMIS_42860 PF00106 short chain dehydrogenase AMIS_4290 PF00072 Response regulator receiver domain AMIS_4290 PF00196 Bacterial regulatory proteins, luxR family AMIS_42900 PF00072 Response regulator receiver domain AMIS_42900 PF00196 Bacterial regulatory proteins, luxR family AMIS_42920 PF00881 Nitroreductase family AMIS_42960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMIS_4300 PF03176 MMPL family AMIS_43040 PF00072 Response regulator receiver domain AMIS_43040 PF00196 Bacterial regulatory proteins, luxR family AMIS_43050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_43090 PF02810 SEC-C motif AMIS_4310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMIS_43110 PF00571 CBS domain AMIS_43110 PF00478 IMP dehydrogenase / GMP reductase domain AMIS_43130 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_43130 PF00107 Zinc-binding dehydrogenase AMIS_43160 PF01547 Bacterial extracellular solute-binding protein AMIS_43170 PF00106 short chain dehydrogenase AMIS_43180 PF03060 Nitronate monooxygenase AMIS_43190 PF00378 Enoyl-CoA hydratase/isomerase AMIS_4320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMIS_43200 PF00009 Elongation factor Tu GTP binding domain AMIS_43200 PF00679 Elongation factor G C-terminus AMIS_43200 PF03764 Elongation factor G, domain IV AMIS_43210 PF08281 Sigma-70, region 4 AMIS_43210 PF04542 Sigma-70 region 2 AMIS_43230 PF00005 ABC transporter AMIS_43270 PF00188 Cysteine-rich secretory protein family AMIS_43280 PF00005 ABC transporter AMIS_43290 PF01032 FecCD transport family AMIS_43300 PF01032 FecCD transport family AMIS_43320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_43320 PF00672 HAMP domain AMIS_43320 PF05227 CHASE3 domain AMIS_43340 PF00196 Bacterial regulatory proteins, luxR family AMIS_43370 PF17932 Tetracyclin repressor-like, C-terminal domain AMIS_43370 PF00440 Bacterial regulatory proteins, tetR family AMIS_43440 PF18665 Tetracyclin repressor-like, C-terminal domain AMIS_43440 PF00440 Bacterial regulatory proteins, tetR family AMIS_43460 PF00970 Oxidoreductase FAD-binding domain AMIS_43460 PF00175 Oxidoreductase NAD-binding domain AMIS_43460 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_43470 PF01883 Iron-sulfur cluster assembly protein AMIS_43480 PF05138 Phenylacetic acid catabolic protein AMIS_43490 PF06243 Phenylacetic acid degradation B AMIS_43500 PF05138 Phenylacetic acid catabolic protein AMIS_43510 PF01575 MaoC like domain AMIS_43510 PF00171 Aldehyde dehydrogenase family AMIS_43570 PF00563 EAL domain AMIS_43570 PF00990 Diguanylate cyclase, GGDEF domain AMIS_43570 PF03707 Bacterial signalling protein N terminal repeat AMIS_43580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMIS_43590 PF00440 Bacterial regulatory proteins, tetR family AMIS_43610 PF00106 short chain dehydrogenase AMIS_43640 PF00440 Bacterial regulatory proteins, tetR family AMIS_43640 PF13977 BetI-type transcriptional repressor, C-terminal AMIS_43740 PF14765 Polyketide synthase dehydratase AMIS_43740 PF00550 Phosphopantetheine attachment site AMIS_43740 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_43740 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_43740 PF08659 KR domain AMIS_43740 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_43740 PF00107 Zinc-binding dehydrogenase AMIS_43740 PF00698 Acyl transferase domain AMIS_43740 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_43750 PF01381 Helix-turn-helix AMIS_43800 PF12802 MarR family AMIS_43830 PF04545 Sigma-70, region 4 AMIS_43830 PF04542 Sigma-70 region 2 AMIS_43830 PF04539 Sigma-70 region 3 AMIS_43840 PF00582 Universal stress protein family AMIS_43850 PF00582 Universal stress protein family AMIS_43860 PF04389 Peptidase family M28 AMIS_43860 PF01483 Proprotein convertase P-domain AMIS_43920 PF01022 Bacterial regulatory protein, arsR family AMIS_43940 PF00107 Zinc-binding dehydrogenase AMIS_43940 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_43980 PF00544 Pectate lyase AMIS_43990 PF00544 Pectate lyase AMIS_440 PF01098 Cell cycle protein AMIS_44010 PF05544 Proline racemase AMIS_44030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_44040 PF01047 MarR family AMIS_44060 PF07690 Major Facilitator Superfamily AMIS_44080 PF00106 short chain dehydrogenase AMIS_44090 PF00440 Bacterial regulatory proteins, tetR family AMIS_44110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_44120 PF04542 Sigma-70 region 2 AMIS_44120 PF04545 Sigma-70, region 4 AMIS_44170 PF04616 Glycosyl hydrolases family 43 AMIS_44180 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_44190 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_44200 PF13416 Bacterial extracellular solute-binding protein AMIS_44210 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMIS_44220 PF00356 Bacterial regulatory proteins, lacI family AMIS_44270 PF00474 Sodium:solute symporter family AMIS_4430 PF03102 NeuB family AMIS_4430 PF08666 SAF domain AMIS_44300 PF14602 Hexapeptide repeat of succinyl-transferase AMIS_44300 PF12464 Maltose acetyltransferase AMIS_44310 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_44310 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_44390 PF03239 Iron permease FTR1 family AMIS_44400 PF13473 Cupredoxin-like domain AMIS_44400 PF09375 Imelysin AMIS_44410 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMIS_44410 PF04261 Dyp-type peroxidase family AMIS_44440 PF00931 NB-ARC domain AMIS_44440 PF03704 Bacterial transcriptional activator domain AMIS_44440 PF00486 Transcriptional regulatory protein, C terminal AMIS_4450 PF00535 Glycosyl transferase family 2 AMIS_4460 PF00563 EAL domain AMIS_4460 PF13188 PAS domain AMIS_4460 PF00990 Diguanylate cyclase, GGDEF domain AMIS_4460 PF03707 Bacterial signalling protein N terminal repeat AMIS_44600 PF12833 Helix-turn-helix domain AMIS_44610 PF00005 ABC transporter AMIS_44630 PF01032 FecCD transport family AMIS_44670 PF00248 Aldo/keto reductase family AMIS_44690 PF04542 Sigma-70 region 2 AMIS_44690 PF04545 Sigma-70, region 4 AMIS_44740 PF00005 ABC transporter AMIS_44770 PF12146 Serine aminopeptidase, S33 AMIS_44780 PF00005 ABC transporter AMIS_44800 PF00672 HAMP domain AMIS_44800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_44800 PF07730 Histidine kinase AMIS_44810 PF00196 Bacterial regulatory proteins, luxR family AMIS_44810 PF00072 Response regulator receiver domain AMIS_44840 PF03737 Aldolase/RraA AMIS_44860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMIS_44870 PF00005 ABC transporter AMIS_44880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMIS_44890 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_4490 PF00561 alpha/beta hydrolase fold AMIS_44960 PF13569 Domain of unknown function (DUF4132) AMIS_44990 PF01494 FAD binding domain AMIS_450 PF00905 Penicillin binding protein transpeptidase domain AMIS_4500 PF01169 Uncharacterized protein family UPF0016 AMIS_45020 PF00534 Glycosyl transferases group 1 AMIS_45020 PF13439 Glycosyltransferase Family 4 AMIS_45030 PF01209 ubiE/COQ5 methyltransferase family AMIS_45070 PF01209 ubiE/COQ5 methyltransferase family AMIS_45160 PF01022 Bacterial regulatory protein, arsR family AMIS_45190 PF03069 Acetamidase/Formamidase family AMIS_4530 PF01042 Endoribonuclease L-PSP AMIS_45410 PF01209 ubiE/COQ5 methyltransferase family AMIS_45420 PF16363 GDP-mannose 4,6 dehydratase AMIS_45440 PF00534 Glycosyl transferases group 1 AMIS_45440 PF17103 Stealth protein CR4, conserved region 4 AMIS_45440 PF17101 Stealth protein CR1, conserved region 1 AMIS_45440 PF17102 Stealth protein CR3, conserved region 3 AMIS_45440 PF11380 Stealth protein CR2, conserved region 2 AMIS_4550 PF00704 Glycosyl hydrolases family 18 AMIS_4550 PF00041 Fibronectin type III domain AMIS_4550 PF00553 Cellulose binding domain AMIS_45500 PF01040 UbiA prenyltransferase family AMIS_45520 PF03795 YCII-related domain AMIS_45530 PF08281 Sigma-70, region 4 AMIS_45530 PF04542 Sigma-70 region 2 AMIS_45540 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIS_45540 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMIS_45580 PF00950 ABC 3 transport family AMIS_45590 PF00005 ABC transporter AMIS_45600 PF01297 Zinc-uptake complex component A periplasmic AMIS_45610 PF01475 Ferric uptake regulator family AMIS_45620 PF00141 Peroxidase AMIS_45640 PF00155 Aminotransferase class I and II AMIS_45670 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_45670 PF01799 [2Fe-2S] binding domain AMIS_45680 PF00034 Cytochrome c AMIS_45680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIS_45680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMIS_45690 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) AMIS_45700 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) AMIS_45710 PF00440 Bacterial regulatory proteins, tetR family AMIS_45740 PF00149 Calcineurin-like phosphoesterase AMIS_45770 PF02627 Carboxymuconolactone decarboxylase family AMIS_45790 PF01979 Amidohydrolase family AMIS_4580 PF00106 short chain dehydrogenase AMIS_45800 PF02515 CoA-transferase family III AMIS_45820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMIS_45890 PF00196 Bacterial regulatory proteins, luxR family AMIS_45910 PF00196 Bacterial regulatory proteins, luxR family AMIS_45910 PF13426 PAS domain AMIS_45920 PF07859 alpha/beta hydrolase fold AMIS_45960 PF06969 HemN C-terminal domain AMIS_45960 PF04055 Radical SAM superfamily AMIS_460 PF00069 Protein kinase domain AMIS_46040 PF00486 Transcriptional regulatory protein, C terminal AMIS_46040 PF00931 NB-ARC domain AMIS_46040 PF03704 Bacterial transcriptional activator domain AMIS_46070 PF00990 Diguanylate cyclase, GGDEF domain AMIS_46070 PF17151 Periplasmic sensor domain AMIS_46090 PF01145 SPFH domain / Band 7 family AMIS_46090 PF15975 Flotillin AMIS_46100 PF12826 Helix-hairpin-helix motif AMIS_46100 PF00533 BRCA1 C Terminus (BRCT) domain AMIS_46100 PF01653 NAD-dependent DNA ligase adenylation domain AMIS_46100 PF03120 NAD-dependent DNA ligase OB-fold domain AMIS_46100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMIS_46110 PF01047 MarR family AMIS_46120 PF07690 Major Facilitator Superfamily AMIS_46130 PF00248 Aldo/keto reductase family AMIS_46150 PF00561 alpha/beta hydrolase fold AMIS_46170 PF00270 DEAD/DEAH box helicase AMIS_46170 PF00271 Helicase conserved C-terminal domain AMIS_46170 PF08148 DSHCT (NUC185) domain AMIS_4620 PF09335 SNARE associated Golgi protein AMIS_46210 PF00005 ABC transporter AMIS_46230 PF00211 Adenylate and Guanylate cyclase catalytic domain AMIS_46230 PF13191 AAA ATPase domain AMIS_46240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_46260 PF00561 alpha/beta hydrolase fold AMIS_46270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_46270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIS_46280 PF00107 Zinc-binding dehydrogenase AMIS_46280 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_4630 PF04542 Sigma-70 region 2 AMIS_4630 PF04539 Sigma-70 region 3 AMIS_4630 PF04545 Sigma-70, region 4 AMIS_46320 PF06441 Epoxide hydrolase N terminus AMIS_46330 PF06441 Epoxide hydrolase N terminus AMIS_46350 PF13472 GDSL-like Lipase/Acylhydrolase family AMIS_46390 PF00196 Bacterial regulatory proteins, luxR family AMIS_46390 PF00072 Response regulator receiver domain AMIS_46400 PF07730 Histidine kinase AMIS_46420 PF00005 ABC transporter AMIS_46440 PF01063 Amino-transferase class IV AMIS_46460 PF04116 Fatty acid hydroxylase superfamily AMIS_4650 PF00464 Serine hydroxymethyltransferase AMIS_46510 PF00294 pfkB family carbohydrate kinase AMIS_46520 PF01081 KDPG and KHG aldolase AMIS_46530 PF01232 Mannitol dehydrogenase Rossmann domain AMIS_46530 PF08125 Mannitol dehydrogenase C-terminal domain AMIS_46540 PF02614 Glucuronate isomerase AMIS_46550 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AMIS_46550 PF08666 SAF domain AMIS_46570 PF00356 Bacterial regulatory proteins, lacI family AMIS_4660 PF00356 Bacterial regulatory proteins, lacI family AMIS_46610 PF00440 Bacterial regulatory proteins, tetR family AMIS_46620 PF07690 Major Facilitator Superfamily AMIS_46630 PF00753 Metallo-beta-lactamase superfamily AMIS_46630 PF14863 Alkyl sulfatase dimerisation AMIS_46630 PF14864 Alkyl sulfatase C-terminal AMIS_46640 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMIS_46650 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase AMIS_46650 PF00754 F5/8 type C domain AMIS_46650 PF13088 BNR repeat-like domain AMIS_4670 PF13407 Periplasmic binding protein domain AMIS_46720 PF03315 Serine dehydratase beta chain AMIS_46720 PF03313 Serine dehydratase alpha chain AMIS_46730 PF01597 Glycine cleavage H-protein AMIS_46740 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIS_46740 PF01571 Aminomethyltransferase folate-binding domain AMIS_46770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIS_46790 PF08448 PAS fold AMIS_46790 PF13426 PAS domain AMIS_46790 PF00072 Response regulator receiver domain AMIS_46790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_46790 PF00512 His Kinase A (phospho-acceptor) domain AMIS_4680 PF02653 Branched-chain amino acid transport system / permease component AMIS_46810 PF03060 Nitronate monooxygenase AMIS_46830 PF00005 ABC transporter AMIS_46840 PF00392 Bacterial regulatory proteins, gntR family AMIS_46840 PF07702 UTRA domain AMIS_46890 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AMIS_46890 PF04616 Glycosyl hydrolases family 43 AMIS_4690 PF00005 ABC transporter AMIS_46910 PF00293 NUDIX domain AMIS_46920 PF02417 Chromate transporter AMIS_46930 PF09828 Chromate resistance exported protein AMIS_46950 PF01925 Sulfite exporter TauE/SafE AMIS_46960 PF06737 Transglycosylase-like domain AMIS_46960 PF01476 LysM domain AMIS_46990 PF12697 Alpha/beta hydrolase family AMIS_470 PF03793 PASTA domain AMIS_470 PF00069 Protein kinase domain AMIS_47020 PF00676 Dehydrogenase E1 component AMIS_47030 PF00962 Adenosine/AMP deaminase AMIS_47060 PF00561 alpha/beta hydrolase fold AMIS_47070 PF00072 Response regulator receiver domain AMIS_47070 PF00196 Bacterial regulatory proteins, luxR family AMIS_47080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_47080 PF07730 Histidine kinase AMIS_4710 PF00563 EAL domain AMIS_4710 PF03707 Bacterial signalling protein N terminal repeat AMIS_4710 PF00990 Diguanylate cyclase, GGDEF domain AMIS_47100 PF00005 ABC transporter AMIS_47150 PF00356 Bacterial regulatory proteins, lacI family AMIS_47160 PF00356 Bacterial regulatory proteins, lacI family AMIS_47180 PF04536 TPM domain AMIS_47210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIS_47220 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_47240 PF00005 ABC transporter AMIS_47240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_47250 PF00005 ABC transporter AMIS_47250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_47270 PF01645 Conserved region in glutamate synthase AMIS_4730 PF17933 Tetracyclin repressor-like, C-terminal domain AMIS_4730 PF00440 Bacterial regulatory proteins, tetR family AMIS_47310 PF13492 GAF domain AMIS_47310 PF13493 Domain of unknown function (DUF4118) AMIS_47310 PF00512 His Kinase A (phospho-acceptor) domain AMIS_47310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_47310 PF02702 Osmosensitive K+ channel His kinase sensor domain AMIS_47320 PF00672 HAMP domain AMIS_47320 PF00512 His Kinase A (phospho-acceptor) domain AMIS_47320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_47330 PF05067 Manganese containing catalase AMIS_47340 PF01566 Natural resistance-associated macrophage protein AMIS_47350 PF00196 Bacterial regulatory proteins, luxR family AMIS_47350 PF00072 Response regulator receiver domain AMIS_47360 PF00512 His Kinase A (phospho-acceptor) domain AMIS_47360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_47380 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIS_47390 PF01740 STAS domain AMIS_4740 PF00005 ABC transporter AMIS_4740 PF13732 Domain of unknown function (DUF4162) AMIS_47470 PF00480 ROK family AMIS_47470 PF01047 MarR family AMIS_47500 PF00248 Aldo/keto reductase family AMIS_47520 PF13397 RNA polymerase-binding protein AMIS_47540 PF00535 Glycosyl transferase family 2 AMIS_47550 PF00795 Carbon-nitrogen hydrolase AMIS_47550 PF00535 Glycosyl transferase family 2 AMIS_47560 PF13538 UvrD-like helicase C-terminal domain AMIS_47570 PF13941 MutL protein AMIS_47580 PF03061 Thioesterase superfamily AMIS_47590 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase AMIS_47590 PF02310 B12 binding domain AMIS_4760 PF00999 Sodium/hydrogen exchanger family AMIS_47600 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit AMIS_47610 PF01979 Amidohydrolase family AMIS_47630 PF12544 Lysine-2,3-aminomutase AMIS_47630 PF04055 Radical SAM superfamily AMIS_47650 PF08241 Methyltransferase domain AMIS_47670 PF03466 LysR substrate binding domain AMIS_47670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_47690 PF01037 Lrp/AsnC ligand binding domain AMIS_47700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_47700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_47700 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_47710 PF00196 Bacterial regulatory proteins, luxR family AMIS_47710 PF00072 Response regulator receiver domain AMIS_47720 PF07730 Histidine kinase AMIS_47730 PF00005 ABC transporter AMIS_47750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMIS_47750 PF01367 5'-3' exonuclease, C-terminal SAM fold AMIS_47760 PF00563 EAL domain AMIS_47760 PF00498 FHA domain AMIS_47760 PF00990 Diguanylate cyclase, GGDEF domain AMIS_47790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_47790 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIS_4780 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIS_4780 PF05221 S-adenosyl-L-homocysteine hydrolase AMIS_47800 PF00990 Diguanylate cyclase, GGDEF domain AMIS_47800 PF05230 MASE2 domain AMIS_47850 PF07690 Major Facilitator Superfamily AMIS_47860 PF00563 EAL domain AMIS_47860 PF08448 PAS fold AMIS_47860 PF00990 Diguanylate cyclase, GGDEF domain AMIS_47860 PF05231 MASE1 AMIS_47860 PF13426 PAS domain AMIS_47860 PF08447 PAS fold AMIS_47950 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_47950 PF00107 Zinc-binding dehydrogenase AMIS_47980 PF12852 Cupin AMIS_47980 PF12833 Helix-turn-helix domain AMIS_480 PF00117 Glutamine amidotransferase class-I AMIS_48020 PF05368 NmrA-like family AMIS_48040 PF00248 Aldo/keto reductase family AMIS_48050 PF13411 MerR HTH family regulatory protein AMIS_48070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIS_48070 PF00128 Alpha amylase, catalytic domain AMIS_48080 PF07690 Major Facilitator Superfamily AMIS_48100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_48120 PF05139 Erythromycin esterase AMIS_48120 PF00156 Phosphoribosyl transferase domain AMIS_48160 PF00563 EAL domain AMIS_48160 PF00990 Diguanylate cyclase, GGDEF domain AMIS_48160 PF03707 Bacterial signalling protein N terminal repeat AMIS_48170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIS_48170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMIS_48190 PF00563 EAL domain AMIS_48190 PF03707 Bacterial signalling protein N terminal repeat AMIS_48190 PF00990 Diguanylate cyclase, GGDEF domain AMIS_48200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIS_48200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIS_48200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIS_48200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIS_48230 PF03883 Peroxide stress protein YaaA AMIS_48250 PF03176 MMPL family AMIS_48260 PF00106 short chain dehydrogenase AMIS_48280 PF02096 60Kd inner membrane protein AMIS_4830 PF16363 GDP-mannose 4,6 dehydratase AMIS_48310 PF00271 Helicase conserved C-terminal domain AMIS_48310 PF12419 SNF2 Helicase protein AMIS_48310 PF00176 SNF2 family N-terminal domain AMIS_48350 PF02018 Carbohydrate binding domain AMIS_48350 PF02927 Cellulase N-terminal ig-like domain AMIS_48350 PF00759 Glycosyl hydrolase family 9 AMIS_48360 PF00067 Cytochrome P450 AMIS_48380 PF13520 Amino acid permease AMIS_48400 PF00069 Protein kinase domain AMIS_48450 PF00485 Phosphoribulokinase / Uridine kinase family AMIS_48460 PF00149 Calcineurin-like phosphoesterase AMIS_4850 PF00083 Sugar (and other) transporter AMIS_48500 PF00005 ABC transporter AMIS_48500 PF00664 ABC transporter transmembrane region AMIS_48510 PF00595 PDZ domain AMIS_48530 PF00561 alpha/beta hydrolase fold AMIS_48550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_48550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_48560 PF00005 ABC transporter AMIS_48570 PF02653 Branched-chain amino acid transport system / permease component AMIS_48590 PF01261 Xylose isomerase-like TIM barrel AMIS_4860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_4860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_48600 PF00171 Aldehyde dehydrogenase family AMIS_48610 PF00205 Thiamine pyrophosphate enzyme, central domain AMIS_48610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIS_48610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_48620 PF04962 KduI/IolB family AMIS_48660 PF03741 Integral membrane protein TerC family AMIS_48680 PF00072 Response regulator receiver domain AMIS_48680 PF00196 Bacterial regulatory proteins, luxR family AMIS_48700 PF00005 ABC transporter AMIS_48700 PF02687 FtsX-like permease family AMIS_48700 PF12704 MacB-like periplasmic core domain AMIS_48710 PF00005 ABC transporter AMIS_48730 PF00672 HAMP domain AMIS_48730 PF00512 His Kinase A (phospho-acceptor) domain AMIS_48730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_48740 PF00486 Transcriptional regulatory protein, C terminal AMIS_48740 PF00072 Response regulator receiver domain AMIS_48770 PF01738 Dienelactone hydrolase family AMIS_48780 PF00196 Bacterial regulatory proteins, luxR family AMIS_48780 PF00072 Response regulator receiver domain AMIS_48800 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_48830 PF00398 Ribosomal RNA adenine dimethylase AMIS_48840 PF13847 Methyltransferase domain AMIS_48860 PF00356 Bacterial regulatory proteins, lacI family AMIS_48880 PF00893 Small Multidrug Resistance protein AMIS_48890 PF00440 Bacterial regulatory proteins, tetR family AMIS_48890 PF13977 BetI-type transcriptional repressor, C-terminal AMIS_48910 PF00144 Beta-lactamase AMIS_48960 PF00069 Protein kinase domain AMIS_4900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_4900 PF03459 TOBE domain AMIS_49000 PF00072 Response regulator receiver domain AMIS_49000 PF00196 Bacterial regulatory proteins, luxR family AMIS_49010 PF07730 Histidine kinase AMIS_49010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_49040 PF03358 NADPH-dependent FMN reductase AMIS_49050 PF00296 Luciferase-like monooxygenase AMIS_49080 PF00005 ABC transporter AMIS_49080 PF00664 ABC transporter transmembrane region AMIS_49090 PF00440 Bacterial regulatory proteins, tetR family AMIS_49100 PF01580 FtsK/SpoIIIE family AMIS_49100 PF12538 DNA transporter AMIS_49120 PF00041 Fibronectin type III domain AMIS_49120 PF00704 Glycosyl hydrolases family 18 AMIS_49140 PF00342 Phosphoglucose isomerase AMIS_49170 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_49180 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_49190 PF13416 Bacterial extracellular solute-binding protein AMIS_49200 PF00356 Bacterial regulatory proteins, lacI family AMIS_49260 PF07532 Bacterial Ig-like domain (group 4) AMIS_49270 PF11606 Family 31 carbohydrate binding protein AMIS_49310 PF00196 Bacterial regulatory proteins, luxR family AMIS_49310 PF00072 Response regulator receiver domain AMIS_49330 PF00005 ABC transporter AMIS_49390 PF02653 Branched-chain amino acid transport system / permease component AMIS_4940 PF03435 Saccharopine dehydrogenase NADP binding domain AMIS_49400 PF00005 ABC transporter AMIS_49410 PF13407 Periplasmic binding protein domain AMIS_49420 PF00480 ROK family AMIS_49430 PF02652 L-lactate permease AMIS_49440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIS_49440 PF01799 [2Fe-2S] binding domain AMIS_49440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIS_49460 PF01654 Cytochrome bd terminal oxidase subunit I AMIS_49470 PF02322 Cytochrome bd terminal oxidase subunit II AMIS_49480 PF00005 ABC transporter AMIS_49480 PF00664 ABC transporter transmembrane region AMIS_49490 PF00664 ABC transporter transmembrane region AMIS_49490 PF00005 ABC transporter AMIS_4950 PF06737 Transglycosylase-like domain AMIS_49500 PF00072 Response regulator receiver domain AMIS_49500 PF13426 PAS domain AMIS_49500 PF00512 His Kinase A (phospho-acceptor) domain AMIS_49500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_49500 PF08448 PAS fold AMIS_49550 PF13340 Putative transposase of IS4/5 family (DUF4096) AMIS_49570 PF00440 Bacterial regulatory proteins, tetR family AMIS_49590 PF00990 Diguanylate cyclase, GGDEF domain AMIS_49590 PF08448 PAS fold AMIS_49590 PF08447 PAS fold AMIS_49590 PF05231 MASE1 AMIS_49590 PF00563 EAL domain AMIS_49590 PF13426 PAS domain AMIS_49610 PF01063 Amino-transferase class IV AMIS_49620 PF12680 SnoaL-like domain AMIS_49630 PF00975 Thioesterase domain AMIS_49640 PF00501 AMP-binding enzyme AMIS_49640 PF00550 Phosphopantetheine attachment site AMIS_49640 PF13193 AMP-binding enzyme C-terminal domain AMIS_49640 PF00668 Condensation domain AMIS_49640 PF00975 Thioesterase domain AMIS_49650 PF00550 Phosphopantetheine attachment site AMIS_49650 PF00668 Condensation domain AMIS_49650 PF13193 AMP-binding enzyme C-terminal domain AMIS_49650 PF00501 AMP-binding enzyme AMIS_49660 PF00005 ABC transporter AMIS_49660 PF13732 Domain of unknown function (DUF4162) AMIS_49690 PF03621 MbtH-like protein AMIS_4970 PF03466 LysR substrate binding domain AMIS_4970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_49710 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_49720 PF00550 Phosphopantetheine attachment site AMIS_49720 PF00668 Condensation domain AMIS_49720 PF13193 AMP-binding enzyme C-terminal domain AMIS_49720 PF00501 AMP-binding enzyme AMIS_49730 PF00583 Acetyltransferase (GNAT) family AMIS_49740 PF03734 L,D-transpeptidase catalytic domain AMIS_49740 PF17964 Bacterial Ig domain AMIS_49810 PF00196 Bacterial regulatory proteins, luxR family AMIS_49810 PF00072 Response regulator receiver domain AMIS_49820 PF07730 Histidine kinase AMIS_49820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_49830 PF02028 BCCT, betaine/carnitine/choline family transporter AMIS_49850 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_49850 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMIS_49850 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIS_49860 PF00150 Cellulase (glycosyl hydrolase family 5) AMIS_49900 PF00440 Bacterial regulatory proteins, tetR family AMIS_49900 PF18665 Tetracyclin repressor-like, C-terminal domain AMIS_49930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_49930 PF00512 His Kinase A (phospho-acceptor) domain AMIS_49930 PF00672 HAMP domain AMIS_49940 PF00072 Response regulator receiver domain AMIS_49940 PF00486 Transcriptional regulatory protein, C terminal AMIS_50 PF05258 Dna[CI] antecedent, DciA AMIS_50000 PF01434 Peptidase family M41 AMIS_50000 PF06480 FtsH Extracellular AMIS_50000 PF17862 AAA+ lid domain AMIS_50000 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_50010 PF00877 NlpC/P60 family AMIS_50010 PF08239 Bacterial SH3 domain AMIS_50010 PF01476 LysM domain AMIS_50020 PF01435 Peptidase family M48 AMIS_50030 PF03965 Penicillinase repressor AMIS_50040 PF01654 Cytochrome bd terminal oxidase subunit I AMIS_50050 PF02322 Cytochrome bd terminal oxidase subunit II AMIS_50060 PF00664 ABC transporter transmembrane region AMIS_50060 PF00005 ABC transporter AMIS_50070 PF00108 Thiolase, N-terminal domain AMIS_50070 PF02803 Thiolase, C-terminal domain AMIS_50100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMIS_50110 PF00106 short chain dehydrogenase AMIS_50120 PF00294 pfkB family carbohydrate kinase AMIS_50120 PF01467 Cytidylyltransferase-like AMIS_50130 PF13580 SIS domain AMIS_50140 PF00534 Glycosyl transferases group 1 AMIS_50140 PF13439 Glycosyltransferase Family 4 AMIS_50180 PF02543 Carbamoyltransferase N-terminus AMIS_50180 PF16861 Carbamoyltransferase C-terminus AMIS_50190 PF00171 Aldehyde dehydrogenase family AMIS_50230 PF00296 Luciferase-like monooxygenase AMIS_50270 PF00809 Pterin binding enzyme AMIS_50290 PF07690 Major Facilitator Superfamily AMIS_50330 PF00296 Luciferase-like monooxygenase AMIS_50350 PF00550 Phosphopantetheine attachment site AMIS_50350 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_50350 PF00698 Acyl transferase domain AMIS_50350 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_50350 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_50350 PF08659 KR domain AMIS_50360 PF00378 Enoyl-CoA hydratase/isomerase AMIS_50370 PF00378 Enoyl-CoA hydratase/isomerase AMIS_50380 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AMIS_50380 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AMIS_50390 PF00550 Phosphopantetheine attachment site AMIS_5040 PF00360 Phytochrome region AMIS_5040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_5040 PF08446 PAS fold AMIS_5040 PF00512 His Kinase A (phospho-acceptor) domain AMIS_5040 PF01590 GAF domain AMIS_50410 PF14765 Polyketide synthase dehydratase AMIS_50410 PF00550 Phosphopantetheine attachment site AMIS_50410 PF08659 KR domain AMIS_50410 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_50410 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_50410 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_50420 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_50420 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_50430 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_50430 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_50440 PF00550 Phosphopantetheine attachment site AMIS_50450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMIS_50450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMIS_50470 PF00296 Luciferase-like monooxygenase AMIS_50490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_50490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIS_5050 PF00768 D-alanyl-D-alanine carboxypeptidase AMIS_50500 PF03704 Bacterial transcriptional activator domain AMIS_50530 PF04075 F420H(2)-dependent quinone reductase AMIS_50550 PF00067 Cytochrome P450 AMIS_50560 PF06722 Protein of unknown function (DUF1205) AMIS_50570 PF00144 Beta-lactamase AMIS_50580 PF03559 NDP-hexose 2,3-dehydratase AMIS_50590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIS_5060 PF01791 DeoC/LacD family aldolase AMIS_50600 PF13649 Methyltransferase domain AMIS_50610 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMIS_50640 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_50640 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_50650 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_50650 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_50660 PF10604 Polyketide cyclase / dehydrase and lipid transport AMIS_50680 PF00106 short chain dehydrogenase AMIS_50690 PF00005 ABC transporter AMIS_50690 PF00664 ABC transporter transmembrane region AMIS_50700 PF16363 GDP-mannose 4,6 dehydratase AMIS_50710 PF00483 Nucleotidyl transferase AMIS_50720 PF03358 NADPH-dependent FMN reductase AMIS_50740 PF02447 GntP family permease AMIS_50750 PF17754 MftR C-terminal domain AMIS_50750 PF00440 Bacterial regulatory proteins, tetR family AMIS_50760 PF07690 Major Facilitator Superfamily AMIS_50780 PF00294 pfkB family carbohydrate kinase AMIS_5080 PF00565 Staphylococcal nuclease homologue AMIS_5080 PF00149 Calcineurin-like phosphoesterase AMIS_5080 PF00746 LPXTG cell wall anchor motif AMIS_5080 PF02872 5'-nucleotidase, C-terminal domain AMIS_50800 PF00183 Hsp90 protein AMIS_50800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_50830 PF00561 alpha/beta hydrolase fold AMIS_50860 PF01497 Periplasmic binding protein AMIS_50900 PF13439 Glycosyltransferase Family 4 AMIS_50900 PF00534 Glycosyl transferases group 1 AMIS_50940 PF00925 GTP cyclohydrolase II AMIS_50960 PF00271 Helicase conserved C-terminal domain AMIS_50960 PF09382 RQC domain AMIS_50960 PF16124 RecQ zinc-binding AMIS_50960 PF00570 HRDC domain AMIS_50960 PF00270 DEAD/DEAH box helicase AMIS_50970 PF04264 YceI-like domain AMIS_5100 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMIS_51000 PF02896 PEP-utilising enzyme, TIM barrel domain AMIS_51000 PF00391 PEP-utilising enzyme, mobile domain AMIS_51000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMIS_51020 PF02913 FAD linked oxidases, C-terminal domain AMIS_51020 PF01565 FAD binding domain AMIS_51030 PF01565 FAD binding domain AMIS_51030 PF02913 FAD linked oxidases, C-terminal domain AMIS_51040 PF02754 Cysteine-rich domain AMIS_51040 PF13183 4Fe-4S dicluster domain AMIS_51050 PF00553 Cellulose binding domain AMIS_51050 PF01341 Glycosyl hydrolases family 6 AMIS_51080 PF01668 SmpB protein AMIS_51090 PF00296 Luciferase-like monooxygenase AMIS_5110 PF00793 DAHP synthetase I family AMIS_51100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIS_51100 PF01411 tRNA synthetases class II (A) AMIS_51100 PF02272 DHHA1 domain AMIS_51110 PF13407 Periplasmic binding protein domain AMIS_51120 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_51130 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_51140 PF13416 Bacterial extracellular solute-binding protein AMIS_51160 PF00171 Aldehyde dehydrogenase family AMIS_51170 PF00128 Alpha amylase, catalytic domain AMIS_51180 PF02720 Domain of unknown function (DUF222) AMIS_51190 PF01300 Telomere recombination AMIS_5120 PF00512 His Kinase A (phospho-acceptor) domain AMIS_5120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_5120 PF00672 HAMP domain AMIS_51210 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIS_51210 PF00553 Cellulose binding domain AMIS_51220 PF00553 Cellulose binding domain AMIS_51220 PF00041 Fibronectin type III domain AMIS_51220 PF02011 Glycosyl hydrolase family 48 AMIS_51250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMIS_51250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMIS_51250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMIS_51260 PF01547 Bacterial extracellular solute-binding protein AMIS_51270 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_51280 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_51290 PF12704 MacB-like periplasmic core domain AMIS_51290 PF02687 FtsX-like permease family AMIS_51290 PF00005 ABC transporter AMIS_5130 PF00486 Transcriptional regulatory protein, C terminal AMIS_5130 PF00072 Response regulator receiver domain AMIS_51300 PF00005 ABC transporter AMIS_51350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_51350 PF00512 His Kinase A (phospho-acceptor) domain AMIS_51350 PF00672 HAMP domain AMIS_51360 PF00486 Transcriptional regulatory protein, C terminal AMIS_51360 PF00072 Response regulator receiver domain AMIS_51380 PF00400 WD domain, G-beta repeat AMIS_51380 PF00069 Protein kinase domain AMIS_51430 PF09055 Nickel-containing superoxide dismutase AMIS_51490 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_5150 PF00488 MutS domain V AMIS_5150 PF01713 Smr domain AMIS_51500 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_51510 PF00571 CBS domain AMIS_51510 PF00005 ABC transporter AMIS_51520 PF00221 Aromatic amino acid lyase AMIS_51550 PF00356 Bacterial regulatory proteins, lacI family AMIS_51560 PF00221 Aromatic amino acid lyase AMIS_51590 PF01266 FAD dependent oxidoreductase AMIS_51650 PF00753 Metallo-beta-lactamase superfamily AMIS_51660 PF00107 Zinc-binding dehydrogenase AMIS_51660 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_51680 PF00440 Bacterial regulatory proteins, tetR family AMIS_51680 PF09209 Tetracyclin repressor-like, C-terminal domain AMIS_51690 PF01842 ACT domain AMIS_51690 PF00551 Formyl transferase AMIS_51700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_51700 PF00512 His Kinase A (phospho-acceptor) domain AMIS_51700 PF00672 HAMP domain AMIS_51710 PF00486 Transcriptional regulatory protein, C terminal AMIS_51710 PF00072 Response regulator receiver domain AMIS_51720 PF00733 Asparagine synthase AMIS_51720 PF13537 Glutamine amidotransferase domain AMIS_51740 PF00072 Response regulator receiver domain AMIS_51740 PF00486 Transcriptional regulatory protein, C terminal AMIS_51750 PF00672 HAMP domain AMIS_51750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_51750 PF00512 His Kinase A (phospho-acceptor) domain AMIS_51780 PF04542 Sigma-70 region 2 AMIS_51780 PF08281 Sigma-70, region 4 AMIS_51780 PF12680 SnoaL-like domain AMIS_51790 PF00561 alpha/beta hydrolase fold AMIS_5180 PF00072 Response regulator receiver domain AMIS_5180 PF00486 Transcriptional regulatory protein, C terminal AMIS_51800 PF00005 ABC transporter AMIS_51800 PF17755 UvrA DNA-binding domain AMIS_51800 PF17760 UvrA interaction domain AMIS_51810 PF13411 MerR HTH family regulatory protein AMIS_51820 PF02577 Bifunctional nuclease AMIS_51830 PF00376 MerR family regulatory protein AMIS_51840 PF00498 FHA domain AMIS_51850 PF01597 Glycine cleavage H-protein AMIS_51870 PF06947 Protein of unknown function (DUF1290) AMIS_5190 PF08446 PAS fold AMIS_5190 PF01590 GAF domain AMIS_5190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_5190 PF00512 His Kinase A (phospho-acceptor) domain AMIS_5190 PF00360 Phytochrome region AMIS_51920 PF17863 AAA lid domain AMIS_51920 PF01078 Magnesium chelatase, subunit ChlI AMIS_51930 PF02567 Phenazine biosynthesis-like protein AMIS_51940 PF01243 Pyridoxamine 5'-phosphate oxidase AMIS_51950 PF00005 ABC transporter AMIS_51970 PF00561 alpha/beta hydrolase fold AMIS_51980 PF02638 Glycosyl hydrolase-like 10 AMIS_51990 PF13439 Glycosyltransferase Family 4 AMIS_51990 PF00534 Glycosyl transferases group 1 AMIS_520 PF06781 Cell division protein CrgA AMIS_5200 PF00072 Response regulator receiver domain AMIS_52000 PF00483 Nucleotidyl transferase AMIS_52020 PF14525 AraC-binding-like domain AMIS_52020 PF12833 Helix-turn-helix domain AMIS_52060 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIS_52060 PF18416 N-acetylglucosamine binding protein domain 2 AMIS_52070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMIS_5210 PF00459 Inositol monophosphatase family AMIS_52150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMIS_52150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMIS_52160 PF01740 STAS domain AMIS_52170 PF00480 ROK family AMIS_52200 PF02653 Branched-chain amino acid transport system / permease component AMIS_52210 PF00005 ABC transporter AMIS_52220 PF13407 Periplasmic binding protein domain AMIS_52230 PF11762 L-arabinose isomerase C-terminal domain AMIS_52230 PF02610 L-arabinose isomerase AMIS_52240 PF00356 Bacterial regulatory proteins, lacI family AMIS_52260 PF01243 Pyridoxamine 5'-phosphate oxidase AMIS_52280 PF02678 Pirin AMIS_52280 PF05726 Pirin C-terminal cupin domain AMIS_52330 PF00990 Diguanylate cyclase, GGDEF domain AMIS_52340 PF02687 FtsX-like permease family AMIS_52340 PF12704 MacB-like periplasmic core domain AMIS_52340 PF00005 ABC transporter AMIS_52350 PF02687 FtsX-like permease family AMIS_52350 PF12704 MacB-like periplasmic core domain AMIS_52350 PF00005 ABC transporter AMIS_52360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMIS_52380 PF00188 Cysteine-rich secretory protein family AMIS_52410 PF01739 CheR methyltransferase, SAM binding domain AMIS_52410 PF03705 CheR methyltransferase, all-alpha domain AMIS_52430 PF00672 HAMP domain AMIS_52430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_52430 PF17200 Single Cache domain 2 AMIS_52440 PF01627 Hpt domain AMIS_52440 PF01584 CheW-like domain AMIS_52440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_52440 PF00072 Response regulator receiver domain AMIS_52450 PF00072 Response regulator receiver domain AMIS_52450 PF01339 CheB methylesterase AMIS_52460 PF00072 Response regulator receiver domain AMIS_52460 PF00990 Diguanylate cyclase, GGDEF domain AMIS_52480 PF12704 MacB-like periplasmic core domain AMIS_52480 PF02687 FtsX-like permease family AMIS_52480 PF00005 ABC transporter AMIS_52490 PF02687 FtsX-like permease family AMIS_52490 PF00005 ABC transporter AMIS_52490 PF12704 MacB-like periplasmic core domain AMIS_52510 PF00072 Response regulator receiver domain AMIS_52510 PF00196 Bacterial regulatory proteins, luxR family AMIS_52540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_52540 PF03466 LysR substrate binding domain AMIS_52570 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIS_52590 PF00463 Isocitrate lyase family AMIS_5260 PF00069 Protein kinase domain AMIS_5260 PF03793 PASTA domain AMIS_52610 PF01329 Pterin 4 alpha carbinolamine dehydratase AMIS_52630 PF00884 Sulfatase AMIS_52670 PF01569 PAP2 superfamily AMIS_52680 PF00672 HAMP domain AMIS_52680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_52680 PF05227 CHASE3 domain AMIS_52690 PF00069 Protein kinase domain AMIS_52690 PF00400 WD domain, G-beta repeat AMIS_52700 PF01434 Peptidase family M41 AMIS_52700 PF06480 FtsH Extracellular AMIS_52700 PF17862 AAA+ lid domain AMIS_52700 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_52710 PF04389 Peptidase family M28 AMIS_52710 PF02225 PA domain AMIS_52750 PF01810 LysE type translocator AMIS_52800 PF08402 TOBE domain AMIS_52800 PF00005 ABC transporter AMIS_52810 PF00150 Cellulase (glycosyl hydrolase family 5) AMIS_52810 PF00553 Cellulose binding domain AMIS_52860 PF00196 Bacterial regulatory proteins, luxR family AMIS_52860 PF00072 Response regulator receiver domain AMIS_52870 PF00005 ABC transporter AMIS_52880 PF01032 FecCD transport family AMIS_52890 PF01032 FecCD transport family AMIS_52900 PF01497 Periplasmic binding protein AMIS_52920 PF01032 FecCD transport family AMIS_52930 PF01032 FecCD transport family AMIS_52940 PF00005 ABC transporter AMIS_52950 PF00672 HAMP domain AMIS_52950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_52960 PF01266 FAD dependent oxidoreductase AMIS_52990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_52990 PF00672 HAMP domain AMIS_52990 PF00512 His Kinase A (phospho-acceptor) domain AMIS_530 PF02754 Cysteine-rich domain AMIS_530 PF13183 4Fe-4S dicluster domain AMIS_5300 PF00570 HRDC domain AMIS_5300 PF00271 Helicase conserved C-terminal domain AMIS_5300 PF09382 RQC domain AMIS_5300 PF16124 RecQ zinc-binding AMIS_5300 PF00270 DEAD/DEAH box helicase AMIS_53000 PF00486 Transcriptional regulatory protein, C terminal AMIS_53000 PF00072 Response regulator receiver domain AMIS_53020 PF00970 Oxidoreductase FAD-binding domain AMIS_53020 PF00042 Globin AMIS_53020 PF00175 Oxidoreductase NAD-binding domain AMIS_53130 PF00072 Response regulator receiver domain AMIS_53130 PF00990 Diguanylate cyclase, GGDEF domain AMIS_53140 PF00196 Bacterial regulatory proteins, luxR family AMIS_53150 PF13732 Domain of unknown function (DUF4162) AMIS_53150 PF00005 ABC transporter AMIS_53160 PF01061 ABC-2 type transporter AMIS_53190 PF02687 FtsX-like permease family AMIS_53190 PF12704 MacB-like periplasmic core domain AMIS_53190 PF00005 ABC transporter AMIS_53200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_53200 PF07730 Histidine kinase AMIS_53200 PF00672 HAMP domain AMIS_53240 PF00563 EAL domain AMIS_53240 PF08668 HDOD domain AMIS_53250 PF00501 AMP-binding enzyme AMIS_53250 PF13193 AMP-binding enzyme C-terminal domain AMIS_53270 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIS_53290 PF16918 Protein kinase G tetratricopeptide repeat AMIS_53290 PF16919 Protein kinase G rubredoxin domain AMIS_53290 PF00069 Protein kinase domain AMIS_53330 PF03704 Bacterial transcriptional activator domain AMIS_53330 PF00931 NB-ARC domain AMIS_53330 PF00486 Transcriptional regulatory protein, C terminal AMIS_53340 PF00561 alpha/beta hydrolase fold AMIS_53380 PF00459 Inositol monophosphatase family AMIS_53400 PF00501 AMP-binding enzyme AMIS_53440 PF00271 Helicase conserved C-terminal domain AMIS_53440 PF08148 DSHCT (NUC185) domain AMIS_53440 PF00270 DEAD/DEAH box helicase AMIS_53450 PF13419 Haloacid dehalogenase-like hydrolase AMIS_53470 PF00781 Diacylglycerol kinase catalytic domain AMIS_53480 PF00902 Sec-independent protein translocase protein (TatC) AMIS_53490 PF02416 mttA/Hcf106 family AMIS_53510 PF13280 WYL domain AMIS_53520 PF13280 WYL domain AMIS_53550 PF01596 O-methyltransferase AMIS_53570 PF03136 Pup-ligase protein AMIS_53580 PF00227 Proteasome subunit AMIS_53590 PF00227 Proteasome subunit AMIS_5360 PF00271 Helicase conserved C-terminal domain AMIS_5360 PF00270 DEAD/DEAH box helicase AMIS_53600 PF05639 Pup-like protein AMIS_53610 PF03136 Pup-ligase protein AMIS_53630 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_53630 PF16450 Proteasomal ATPase OB C-terminal domain AMIS_53630 PF17758 Proteasomal ATPase OB N-terminal domain AMIS_53660 PF08704 tRNA methyltransferase complex GCD14 subunit AMIS_53670 PF00571 CBS domain AMIS_53670 PF02163 Peptidase family M50 AMIS_53690 PF00196 Bacterial regulatory proteins, luxR family AMIS_53690 PF00072 Response regulator receiver domain AMIS_53710 PF13419 Haloacid dehalogenase-like hydrolase AMIS_53730 PF00248 Aldo/keto reductase family AMIS_53740 PF02687 FtsX-like permease family AMIS_53740 PF00005 ABC transporter AMIS_53740 PF12704 MacB-like periplasmic core domain AMIS_53750 PF12704 MacB-like periplasmic core domain AMIS_53750 PF02687 FtsX-like permease family AMIS_53750 PF00005 ABC transporter AMIS_53850 PF00196 Bacterial regulatory proteins, luxR family AMIS_53850 PF00072 Response regulator receiver domain AMIS_53860 PF00665 Integrase core domain AMIS_53880 PF07730 Histidine kinase AMIS_53890 PF00072 Response regulator receiver domain AMIS_53890 PF00196 Bacterial regulatory proteins, luxR family AMIS_53910 PF01406 tRNA synthetases class I (C) catalytic domain AMIS_53940 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_53950 PF00296 Luciferase-like monooxygenase AMIS_53960 PF00248 Aldo/keto reductase family AMIS_53990 PF07687 Peptidase dimerisation domain AMIS_53990 PF01546 Peptidase family M20/M25/M40 AMIS_54010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_54010 PF03466 LysR substrate binding domain AMIS_54020 PF17871 AAA lid domain AMIS_54020 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_54020 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_54020 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_54020 PF07724 AAA domain (Cdc48 subfamily) AMIS_54060 PF12538 DNA transporter AMIS_54060 PF01580 FtsK/SpoIIIE family AMIS_54130 PF00072 Response regulator receiver domain AMIS_54130 PF00486 Transcriptional regulatory protein, C terminal AMIS_54140 PF12796 Ankyrin repeats (3 copies) AMIS_54140 PF00023 Ankyrin repeat AMIS_54150 PF07517 SecA DEAD-like domain AMIS_54150 PF01043 SecA preprotein cross-linking domain AMIS_54150 PF07516 SecA Wing and Scaffold domain AMIS_54160 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_54160 PF00107 Zinc-binding dehydrogenase AMIS_54170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_54170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_54180 PF00535 Glycosyl transferase family 2 AMIS_54190 PF13439 Glycosyltransferase Family 4 AMIS_54190 PF00534 Glycosyl transferases group 1 AMIS_54210 PF00072 Response regulator receiver domain AMIS_54210 PF01339 CheB methylesterase AMIS_54220 PF01339 CheB methylesterase AMIS_54220 PF08448 PAS fold AMIS_54220 PF03705 CheR methyltransferase, all-alpha domain AMIS_54220 PF01739 CheR methyltransferase, SAM binding domain AMIS_54240 PF04545 Sigma-70, region 4 AMIS_54240 PF04542 Sigma-70 region 2 AMIS_54240 PF04539 Sigma-70 region 3 AMIS_54290 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMIS_54290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_54300 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMIS_54300 PF12557 Cob(I)alamin adenosyltransferase N terminal AMIS_54310 PF13519 von Willebrand factor type A domain AMIS_54310 PF17863 AAA lid domain AMIS_54310 PF07728 AAA domain (dynein-related subfamily) AMIS_54320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_54320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_54330 PF00285 Citrate synthase, C-terminal domain AMIS_54350 PF00563 EAL domain AMIS_54350 PF00990 Diguanylate cyclase, GGDEF domain AMIS_54350 PF03707 Bacterial signalling protein N terminal repeat AMIS_54370 PF03372 Endonuclease/Exonuclease/phosphatase family AMIS_54430 PF00271 Helicase conserved C-terminal domain AMIS_54430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMIS_54430 PF11898 Domain of unknown function (DUF3418) AMIS_54430 PF04408 Helicase associated domain (HA2) AMIS_54430 PF00270 DEAD/DEAH box helicase AMIS_54440 PF03816 Cell envelope-related transcriptional attenuator domain AMIS_54450 PF00072 Response regulator receiver domain AMIS_54460 PF00360 Phytochrome region AMIS_54460 PF08446 PAS fold AMIS_54460 PF00512 His Kinase A (phospho-acceptor) domain AMIS_54460 PF01590 GAF domain AMIS_54460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_54470 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMIS_54470 PF10135 Rod binding protein AMIS_5450 PF00581 Rhodanese-like domain AMIS_5450 PF00899 ThiF family AMIS_54500 PF04545 Sigma-70, region 4 AMIS_54500 PF04539 Sigma-70 region 3 AMIS_54500 PF04542 Sigma-70 region 2 AMIS_54510 PF00480 ROK family AMIS_54550 PF11896 Domain of unknown function (DUF3416) AMIS_54550 PF00128 Alpha amylase, catalytic domain AMIS_54560 PF16657 Maltogenic Amylase, C-terminal domain AMIS_54560 PF00128 Alpha amylase, catalytic domain AMIS_54570 PF18085 Maltokinase N-terminal cap domain AMIS_54580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIS_54580 PF00128 Alpha amylase, catalytic domain AMIS_54580 PF02806 Alpha amylase, C-terminal all-beta domain AMIS_54590 PF13302 Acetyltransferase (GNAT) domain AMIS_54620 PF16921 Tex protein YqgF-like domain AMIS_54620 PF09371 Tex-like protein N-terminal domain AMIS_54620 PF00575 S1 RNA binding domain AMIS_54620 PF17674 HHH domain AMIS_54630 PF00400 WD domain, G-beta repeat AMIS_54630 PF00069 Protein kinase domain AMIS_54650 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AMIS_54680 PF00578 AhpC/TSA family AMIS_54690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMIS_54690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIS_54690 PF10531 SLBB domain AMIS_5470 PF00171 Aldehyde dehydrogenase family AMIS_54730 PF00553 Cellulose binding domain AMIS_54730 PF01341 Glycosyl hydrolases family 6 AMIS_54730 PF00041 Fibronectin type III domain AMIS_54740 PF08447 PAS fold AMIS_54740 PF08448 PAS fold AMIS_54740 PF00990 Diguanylate cyclase, GGDEF domain AMIS_54740 PF00563 EAL domain AMIS_54760 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_54760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_54760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_54770 PF02091 Glycyl-tRNA synthetase alpha subunit AMIS_54770 PF02092 Glycyl-tRNA synthetase beta subunit AMIS_54790 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIS_5480 PF01472 PUA domain AMIS_5480 PF00696 Amino acid kinase family AMIS_54810 PF01384 Phosphate transporter family AMIS_54840 PF00202 Aminotransferase class-III AMIS_54850 PF00155 Aminotransferase class I and II AMIS_54850 PF00392 Bacterial regulatory proteins, gntR family AMIS_54860 PF00795 Carbon-nitrogen hydrolase AMIS_54870 PF01979 Amidohydrolase family AMIS_54890 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_54900 PF00005 ABC transporter AMIS_54910 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_54920 PF09084 NMT1/THI5 like AMIS_54960 PF00563 EAL domain AMIS_54960 PF08448 PAS fold AMIS_54960 PF08447 PAS fold AMIS_54960 PF00990 Diguanylate cyclase, GGDEF domain AMIS_54980 PF00069 Protein kinase domain AMIS_54990 PF00356 Bacterial regulatory proteins, lacI family AMIS_550 PF00571 CBS domain AMIS_550 PF03471 Transporter associated domain AMIS_550 PF01595 Cyclin M transmembrane N-terminal domain AMIS_5500 PF04072 Leucine carboxyl methyltransferase AMIS_55000 PF12833 Helix-turn-helix domain AMIS_55000 PF01965 DJ-1/PfpI family AMIS_55010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMIS_55010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIS_55020 PF00356 Bacterial regulatory proteins, lacI family AMIS_55040 PF13649 Methyltransferase domain AMIS_55080 PF00544 Pectate lyase AMIS_5510 PF13305 Tetracyclin repressor-like, C-terminal domain AMIS_5510 PF00440 Bacterial regulatory proteins, tetR family AMIS_55100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_55100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_55110 PF01232 Mannitol dehydrogenase Rossmann domain AMIS_55110 PF08125 Mannitol dehydrogenase C-terminal domain AMIS_55120 PF02614 Glucuronate isomerase AMIS_55130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_55130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_55140 PF00356 Bacterial regulatory proteins, lacI family AMIS_55160 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_55170 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_55190 PF01037 Lrp/AsnC ligand binding domain AMIS_55200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIS_55200 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIS_55220 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIS_55230 PF03180 NLPA lipoprotein AMIS_55240 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_55250 PF00005 ABC transporter AMIS_55250 PF09383 NIL domain AMIS_55260 PF00196 Bacterial regulatory proteins, luxR family AMIS_55260 PF00072 Response regulator receiver domain AMIS_55270 PF07730 Histidine kinase AMIS_55290 PF17853 GGDEF-like domain AMIS_55290 PF13556 PucR C-terminal helix-turn-helix domain AMIS_55300 PF00175 Oxidoreductase NAD-binding domain AMIS_55300 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_55300 PF00970 Oxidoreductase FAD-binding domain AMIS_55310 PF00487 Fatty acid desaturase AMIS_55320 PF02056 Family 4 glycosyl hydrolase AMIS_55320 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMIS_55370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_55370 PF00672 HAMP domain AMIS_55370 PF12729 Four helix bundle sensory module for signal transduction AMIS_55380 PF07690 Major Facilitator Superfamily AMIS_55420 PF00970 Oxidoreductase FAD-binding domain AMIS_55420 PF00175 Oxidoreductase NAD-binding domain AMIS_55420 PF00042 Globin AMIS_55450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_55450 PF02203 Tar ligand binding domain homologue AMIS_55450 PF00672 HAMP domain AMIS_55460 PF01301 Glycosyl hydrolases family 35 AMIS_55480 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_55490 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_5550 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMIS_55500 PF00356 Bacterial regulatory proteins, lacI family AMIS_55510 PF07745 Glycosyl hydrolase family 53 AMIS_55520 PF07745 Glycosyl hydrolase family 53 AMIS_55530 PF00196 Bacterial regulatory proteins, luxR family AMIS_55580 PF03176 MMPL family AMIS_55620 PF07969 Amidohydrolase family AMIS_55650 PF11762 L-arabinose isomerase C-terminal domain AMIS_55650 PF02610 L-arabinose isomerase AMIS_55660 PF02653 Branched-chain amino acid transport system / permease component AMIS_55670 PF02653 Branched-chain amino acid transport system / permease component AMIS_55680 PF00005 ABC transporter AMIS_55690 PF13407 Periplasmic binding protein domain AMIS_5570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMIS_55700 PF00356 Bacterial regulatory proteins, lacI family AMIS_55720 PF00596 Class II Aldolase and Adducin N-terminal domain AMIS_55730 PF12849 PBP superfamily domain AMIS_55760 PF13195 Protein of unknown function (DUF4011) AMIS_55760 PF13087 AAA domain AMIS_55760 PF13086 AAA domain AMIS_55760 PF13087 AAA domain AMIS_55760 PF13195 Protein of unknown function (DUF4011) AMIS_55760 PF13086 AAA domain AMIS_55780 PF00107 Zinc-binding dehydrogenase AMIS_55780 PF16884 N-terminal domain of oxidoreductase AMIS_55790 PF00440 Bacterial regulatory proteins, tetR family AMIS_5580 PF03900 Porphobilinogen deaminase, C-terminal domain AMIS_5580 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMIS_55800 PF02080 TrkA-C domain AMIS_55800 PF02254 TrkA-N domain AMIS_55850 PF00672 HAMP domain AMIS_55850 PF16591 Helical bimodular sensor domain AMIS_55850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_55860 PF03816 Cell envelope-related transcriptional attenuator domain AMIS_55860 PF13399 LytR cell envelope-related transcriptional attenuator AMIS_55910 PF00005 ABC transporter AMIS_55920 PF01738 Dienelactone hydrolase family AMIS_55920 PF00156 Phosphoribosyl transferase domain AMIS_55930 PF00156 Phosphoribosyl transferase domain AMIS_55930 PF01738 Dienelactone hydrolase family AMIS_560 PF01595 Cyclin M transmembrane N-terminal domain AMIS_560 PF00571 CBS domain AMIS_56060 PF03466 LysR substrate binding domain AMIS_56060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_56070 PF00171 Aldehyde dehydrogenase family AMIS_56090 PF13419 Haloacid dehalogenase-like hydrolase AMIS_56110 PF01565 FAD binding domain AMIS_56110 PF08031 Berberine and berberine like AMIS_56120 PF00171 Aldehyde dehydrogenase family AMIS_56130 PF09339 IclR helix-turn-helix domain AMIS_56130 PF01614 Bacterial transcriptional regulator AMIS_56140 PF00171 Aldehyde dehydrogenase family AMIS_56150 PF00248 Aldo/keto reductase family AMIS_56170 PF05448 Acetyl xylan esterase (AXE1) AMIS_56180 PF13538 UvrD-like helicase C-terminal domain AMIS_56180 PF14490 Helix-hairpin-helix containing domain AMIS_56180 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMIS_5620 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMIS_56220 PF12729 Four helix bundle sensory module for signal transduction AMIS_56220 PF00672 HAMP domain AMIS_56220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_56230 PF02734 DAK2 domain AMIS_56240 PF02733 Dak1 domain AMIS_56250 PF00381 PTS HPr component phosphorylation site AMIS_56250 PF00391 PEP-utilising enzyme, mobile domain AMIS_56250 PF03610 PTS system fructose IIA component AMIS_56250 PF05524 PEP-utilising enzyme, N-terminal AMIS_56270 PF02803 Thiolase, C-terminal domain AMIS_56270 PF00108 Thiolase, N-terminal domain AMIS_5630 PF00146 NADH dehydrogenase AMIS_56300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_56300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_56300 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_56310 PF13193 AMP-binding enzyme C-terminal domain AMIS_56310 PF00501 AMP-binding enzyme AMIS_56340 PF13195 Protein of unknown function (DUF4011) AMIS_56340 PF13086 AAA domain AMIS_56340 PF13087 AAA domain AMIS_56340 PF13087 AAA domain AMIS_56340 PF13086 AAA domain AMIS_56340 PF13195 Protein of unknown function (DUF4011) AMIS_56350 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_56350 PF13192 Thioredoxin domain AMIS_56370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIS_5640 PF00037 4Fe-4S binding domain AMIS_56410 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMIS_56410 PF02018 Carbohydrate binding domain AMIS_56420 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AMIS_56420 PF04616 Glycosyl hydrolases family 43 AMIS_56430 PF02082 Transcriptional regulator AMIS_56440 PF00970 Oxidoreductase FAD-binding domain AMIS_56440 PF00042 Globin AMIS_56440 PF00175 Oxidoreductase NAD-binding domain AMIS_56450 PF00743 Flavin-binding monooxygenase-like AMIS_56460 PF05199 GMC oxidoreductase AMIS_56490 PF02146 Sir2 family AMIS_5650 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMIS_56500 PF13193 AMP-binding enzyme C-terminal domain AMIS_56500 PF00501 AMP-binding enzyme AMIS_56550 PF01425 Amidase AMIS_56560 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIS_56560 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMIS_56590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_56590 PF00005 ABC transporter AMIS_5660 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMIS_56600 PF00005 ABC transporter AMIS_56600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_56610 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIS_56610 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_56620 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_56630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIS_56640 PF00563 EAL domain AMIS_56640 PF00990 Diguanylate cyclase, GGDEF domain AMIS_56640 PF03707 Bacterial signalling protein N terminal repeat AMIS_56650 PF16859 Tetracyclin repressor-like, C-terminal domain AMIS_56650 PF00440 Bacterial regulatory proteins, tetR family AMIS_56660 PF07690 Major Facilitator Superfamily AMIS_56670 PF13086 AAA domain AMIS_56670 PF13086 AAA domain AMIS_56670 PF13087 AAA domain AMIS_56670 PF13195 Protein of unknown function (DUF4011) AMIS_56670 PF13195 Protein of unknown function (DUF4011) AMIS_56670 PF13087 AAA domain AMIS_56680 PF02719 Polysaccharide biosynthesis protein AMIS_56690 PF13614 AAA domain AMIS_5670 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AMIS_5670 PF00361 Proton-conducting membrane transporter AMIS_5670 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMIS_56710 PF00456 Transketolase, thiamine diphosphate binding domain AMIS_56720 PF02779 Transketolase, pyrimidine binding domain AMIS_56720 PF02780 Transketolase, C-terminal domain AMIS_56730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIS_56740 PF00535 Glycosyl transferase family 2 AMIS_56750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIS_56760 PF02397 Bacterial sugar transferase AMIS_56790 PF00717 Peptidase S24-like AMIS_56790 PF01726 LexA DNA binding domain AMIS_5680 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMIS_5680 PF00361 Proton-conducting membrane transporter AMIS_56860 PF00005 ABC transporter AMIS_56870 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIS_56870 PF00005 ABC transporter AMIS_56880 PF13458 Periplasmic binding protein AMIS_5690 PF00361 Proton-conducting membrane transporter AMIS_56950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_56960 PF00265 Thymidine kinase AMIS_57000 PF00440 Bacterial regulatory proteins, tetR family AMIS_57000 PF02909 Tetracyclin repressor-like, C-terminal domain AMIS_57030 PF03328 HpcH/HpaI aldolase/citrate lyase family AMIS_57040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_57040 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_57040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_57060 PF02803 Thiolase, C-terminal domain AMIS_57060 PF00108 Thiolase, N-terminal domain AMIS_57110 PF02515 CoA-transferase family III AMIS_57150 PF09339 IclR helix-turn-helix domain AMIS_57150 PF01614 Bacterial transcriptional regulator AMIS_57160 PF01613 Flavin reductase like domain AMIS_57170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_57170 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_57170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_57180 PF00171 Aldehyde dehydrogenase family AMIS_5720 PF01435 Peptidase family M48 AMIS_57200 PF01494 FAD binding domain AMIS_57210 PF00171 Aldehyde dehydrogenase family AMIS_5730 PF00296 Luciferase-like monooxygenase AMIS_57340 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIS_57340 PF00005 ABC transporter AMIS_57350 PF00005 ABC transporter AMIS_57420 PF02515 CoA-transferase family III AMIS_57430 PF01979 Amidohydrolase family AMIS_57480 PF00501 AMP-binding enzyme AMIS_57480 PF13193 AMP-binding enzyme C-terminal domain AMIS_57490 PF00682 HMGL-like AMIS_57500 PF02515 CoA-transferase family III AMIS_57510 PF00857 Isochorismatase family AMIS_57540 PF00939 Sodium:sulfate symporter transmembrane region AMIS_57570 PF01341 Glycosyl hydrolases family 6 AMIS_57570 PF00553 Cellulose binding domain AMIS_57590 PF08281 Sigma-70, region 4 AMIS_57590 PF04542 Sigma-70 region 2 AMIS_5760 PF04542 Sigma-70 region 2 AMIS_5760 PF08281 Sigma-70, region 4 AMIS_57640 PF08532 Beta-galactosidase trimerisation domain AMIS_57640 PF08533 Beta-galactosidase C-terminal domain AMIS_57640 PF02449 Beta-galactosidase AMIS_57670 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_57680 PF00356 Bacterial regulatory proteins, lacI family AMIS_57730 PF04616 Glycosyl hydrolases family 43 AMIS_57750 PF03466 LysR substrate binding domain AMIS_57750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_57780 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIS_57780 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMIS_57780 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_57790 PF01066 CDP-alcohol phosphatidyltransferase AMIS_57790 PF12804 MobA-like NTP transferase domain AMIS_57810 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIS_57810 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMIS_57820 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_57820 PF01799 [2Fe-2S] binding domain AMIS_57830 PF00941 FAD binding domain in molybdopterin dehydrogenase AMIS_57830 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMIS_57850 PF02583 Metal-sensitive transcriptional repressor AMIS_57880 PF00403 Heavy-metal-associated domain AMIS_57890 PF03144 Elongation factor Tu domain 2 AMIS_57890 PF00009 Elongation factor Tu GTP binding domain AMIS_57890 PF03143 Elongation factor Tu C-terminal domain AMIS_5790 PF04461 Protein of unknown function (DUF520) AMIS_57900 PF00294 pfkB family carbohydrate kinase AMIS_57940 PF00128 Alpha amylase, catalytic domain AMIS_57940 PF00686 Starch binding domain AMIS_57940 PF02806 Alpha amylase, C-terminal all-beta domain AMIS_57950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMIS_57950 PF01266 FAD dependent oxidoreductase AMIS_57960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_57960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_57970 PF00230 Major intrinsic protein AMIS_57980 PF09339 IclR helix-turn-helix domain AMIS_57980 PF01614 Bacterial transcriptional regulator AMIS_57990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMIS_57990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMIS_58090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMIS_5810 PF00581 Rhodanese-like domain AMIS_58110 PF01883 Iron-sulfur cluster assembly protein AMIS_58110 PF10609 NUBPL iron-transfer P-loop NTPase AMIS_58160 PF01494 FAD binding domain AMIS_58190 PF00107 Zinc-binding dehydrogenase AMIS_58190 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_58250 PF02397 Bacterial sugar transferase AMIS_58260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMIS_58260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMIS_58260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMIS_58270 PF02719 Polysaccharide biosynthesis protein AMIS_58280 PF00534 Glycosyl transferases group 1 AMIS_58280 PF13439 Glycosyltransferase Family 4 AMIS_5830 PF00563 EAL domain AMIS_5830 PF00990 Diguanylate cyclase, GGDEF domain AMIS_5830 PF03707 Bacterial signalling protein N terminal repeat AMIS_5830 PF13188 PAS domain AMIS_58300 PF00196 Bacterial regulatory proteins, luxR family AMIS_58300 PF00072 Response regulator receiver domain AMIS_58340 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMIS_58350 PF07690 Major Facilitator Superfamily AMIS_58380 PF03144 Elongation factor Tu domain 2 AMIS_58380 PF14492 Elongation Factor G, domain II AMIS_58380 PF03764 Elongation factor G, domain IV AMIS_58380 PF00679 Elongation factor G C-terminus AMIS_58380 PF00009 Elongation factor Tu GTP binding domain AMIS_5840 PF00471 Ribosomal protein L33 AMIS_58470 PF08241 Methyltransferase domain AMIS_58480 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMIS_58480 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMIS_58490 PF00072 Response regulator receiver domain AMIS_5850 PF13452 N-terminal half of MaoC dehydratase AMIS_58500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMIS_58500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_58510 PF00375 Sodium:dicarboxylate symporter family AMIS_58520 PF01593 Flavin containing amine oxidoreductase AMIS_58540 PF13732 Domain of unknown function (DUF4162) AMIS_58540 PF00005 ABC transporter AMIS_58550 PF01061 ABC-2 type transporter AMIS_58560 PF00196 Bacterial regulatory proteins, luxR family AMIS_58570 PF02080 TrkA-C domain AMIS_58570 PF02254 TrkA-N domain AMIS_58580 PF02386 Cation transport protein AMIS_58590 PF00544 Pectate lyase AMIS_58620 PF00128 Alpha amylase, catalytic domain AMIS_58620 PF02806 Alpha amylase, C-terminal all-beta domain AMIS_58620 PF00686 Starch binding domain AMIS_58640 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_58640 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_58640 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_58640 PF17871 AAA lid domain AMIS_58640 PF07724 AAA domain (Cdc48 subfamily) AMIS_58660 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMIS_58660 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIS_58670 PF02225 PA domain AMIS_58670 PF04389 Peptidase family M28 AMIS_58690 PF01734 Patatin-like phospholipase AMIS_5870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMIS_58720 PF02350 UDP-N-acetylglucosamine 2-epimerase AMIS_58740 PF00535 Glycosyl transferase family 2 AMIS_58750 PF02585 GlcNAc-PI de-N-acetylase AMIS_58770 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_58770 PF00202 Aminotransferase class-III AMIS_58770 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_58770 PF00501 AMP-binding enzyme AMIS_58770 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_58770 PF13193 AMP-binding enzyme C-terminal domain AMIS_58770 PF00668 Condensation domain AMIS_58770 PF00550 Phosphopantetheine attachment site AMIS_58790 PF05922 Peptidase inhibitor I9 AMIS_58790 PF00082 Subtilase family AMIS_5880 PF02357 Transcription termination factor nusG AMIS_58880 PF00248 Aldo/keto reductase family AMIS_5890 PF00687 Ribosomal protein L1p/L10e family AMIS_58950 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_58950 PF00107 Zinc-binding dehydrogenase AMIS_58960 PF02901 Pyruvate formate lyase-like AMIS_58960 PF01228 Glycine radical AMIS_58970 PF04055 Radical SAM superfamily AMIS_590 PF00692 dUTPase AMIS_5900 PF00005 ABC transporter AMIS_59050 PF00009 Elongation factor Tu GTP binding domain AMIS_59050 PF09107 Elongation factor SelB, winged helix AMIS_59050 PF09105 Elongation factor SelB, winged helix AMIS_59050 PF03144 Elongation factor Tu domain 2 AMIS_59050 PF09106 Elongation factor SelB, winged helix AMIS_59060 PF03841 L-seryl-tRNA selenium transferase AMIS_59060 PF12390 Selenocysteine synthase N terminal AMIS_59080 PF00586 AIR synthase related protein, N-terminal domain AMIS_59080 PF02769 AIR synthase related protein, C-terminal domain AMIS_59100 PF04978 Protein of unknown function (DUF664) AMIS_59130 PF13247 4Fe-4S dicluster domain AMIS_59130 PF12800 4Fe-4S binding domain AMIS_59140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMIS_59140 PF00384 Molybdopterin oxidoreductase AMIS_59140 PF01568 Molydopterin dinucleotide binding domain AMIS_59150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMIS_59150 PF00384 Molybdopterin oxidoreductase AMIS_59150 PF01568 Molydopterin dinucleotide binding domain AMIS_5920 PF00466 Ribosomal protein L10 AMIS_59240 PF02031 Streptomyces extracellular neutral proteinase (M7) family AMIS_59260 PF08281 Sigma-70, region 4 AMIS_59260 PF04542 Sigma-70 region 2 AMIS_59290 PF00440 Bacterial regulatory proteins, tetR family AMIS_59290 PF16859 Tetracyclin repressor-like, C-terminal domain AMIS_5930 PF00542 Ribosomal protein L7/L12 C-terminal domain AMIS_5930 PF16320 Ribosomal protein L7/L12 dimerisation domain AMIS_59300 PF00296 Luciferase-like monooxygenase AMIS_59310 PF12833 Helix-turn-helix domain AMIS_59310 PF01965 DJ-1/PfpI family AMIS_59380 PF01522 Polysaccharide deacetylase AMIS_59380 PF00457 Glycosyl hydrolases family 11 AMIS_5940 PF04560 RNA polymerase Rpb2, domain 7 AMIS_5940 PF10385 RNA polymerase beta subunit external 1 domain AMIS_5940 PF04565 RNA polymerase Rpb2, domain 3 AMIS_5940 PF04561 RNA polymerase Rpb2, domain 2 AMIS_5940 PF04563 RNA polymerase beta subunit AMIS_5940 PF00562 RNA polymerase Rpb2, domain 6 AMIS_59470 PF00245 Alkaline phosphatase AMIS_59480 PF12833 Helix-turn-helix domain AMIS_59480 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AMIS_5950 PF00623 RNA polymerase Rpb1, domain 2 AMIS_5950 PF04983 RNA polymerase Rpb1, domain 3 AMIS_5950 PF05000 RNA polymerase Rpb1, domain 4 AMIS_5950 PF04997 RNA polymerase Rpb1, domain 1 AMIS_5950 PF04998 RNA polymerase Rpb1, domain 5 AMIS_59510 PF13407 Periplasmic binding protein domain AMIS_59520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_59520 PF16591 Helical bimodular sensor domain AMIS_59520 PF00672 HAMP domain AMIS_59590 PF00392 Bacterial regulatory proteins, gntR family AMIS_59590 PF07702 UTRA domain AMIS_59600 PF01266 FAD dependent oxidoreductase AMIS_59620 PF01547 Bacterial extracellular solute-binding protein AMIS_59630 PF00005 ABC transporter AMIS_59630 PF08402 TOBE domain AMIS_59640 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_59650 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_59670 PF07859 alpha/beta hydrolase fold AMIS_59700 PF00005 ABC transporter AMIS_59700 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIS_59710 PF00005 ABC transporter AMIS_59740 PF01047 MarR family AMIS_59760 PF17754 MftR C-terminal domain AMIS_59760 PF00440 Bacterial regulatory proteins, tetR family AMIS_59770 PF00106 short chain dehydrogenase AMIS_59780 PF01209 ubiE/COQ5 methyltransferase family AMIS_5980 PF00164 Ribosomal protein S12/S23 AMIS_59800 PF00557 Metallopeptidase family M24 AMIS_59820 PF00854 POT family AMIS_59860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMIS_59860 PF13378 Enolase C-terminal domain-like AMIS_59870 PF00701 Dihydrodipicolinate synthetase family AMIS_59880 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_59890 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_5990 PF00177 Ribosomal protein S7p/S5e AMIS_59900 PF01547 Bacterial extracellular solute-binding protein AMIS_59910 PF01370 NAD dependent epimerase/dehydratase family AMIS_59920 PF00171 Aldehyde dehydrogenase family AMIS_59930 PF01614 Bacterial transcriptional regulator AMIS_59930 PF09339 IclR helix-turn-helix domain AMIS_59950 PF02156 Glycosyl hydrolase family 26 AMIS_59970 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_59980 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_6000 PF00009 Elongation factor Tu GTP binding domain AMIS_6000 PF00679 Elongation factor G C-terminus AMIS_6000 PF14492 Elongation Factor G, domain II AMIS_6000 PF03764 Elongation factor G, domain IV AMIS_6000 PF03144 Elongation factor Tu domain 2 AMIS_60010 PF01047 MarR family AMIS_60010 PF00480 ROK family AMIS_60060 PF00440 Bacterial regulatory proteins, tetR family AMIS_60060 PF02909 Tetracyclin repressor-like, C-terminal domain AMIS_60070 PF08659 KR domain AMIS_60070 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_60070 PF00698 Acyl transferase domain AMIS_60070 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_60070 PF00107 Zinc-binding dehydrogenase AMIS_60070 PF14765 Polyketide synthase dehydratase AMIS_60070 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_60070 PF00550 Phosphopantetheine attachment site AMIS_60070 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_60080 PF04055 Radical SAM superfamily AMIS_60090 PF00912 Transglycosylase AMIS_60090 PF17092 Penicillin-binding protein OB-like domain AMIS_60090 PF00905 Penicillin binding protein transpeptidase domain AMIS_6010 PF03143 Elongation factor Tu C-terminal domain AMIS_6010 PF03144 Elongation factor Tu domain 2 AMIS_6010 PF00009 Elongation factor Tu GTP binding domain AMIS_60100 PF16658 Class II release factor RF3, C-terminal domain AMIS_60100 PF00009 Elongation factor Tu GTP binding domain AMIS_60110 PF01433 Peptidase family M1 domain AMIS_60110 PF11838 ERAP1-like C-terminal domain AMIS_60120 PF00550 Phosphopantetheine attachment site AMIS_60120 PF00668 Condensation domain AMIS_60120 PF13193 AMP-binding enzyme C-terminal domain AMIS_60120 PF07993 Male sterility protein AMIS_60120 PF00501 AMP-binding enzyme AMIS_60130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIS_60130 PF00128 Alpha amylase, catalytic domain AMIS_60150 PF01374 Glycosyl hydrolase family 46 AMIS_60190 PF13087 AAA domain AMIS_60190 PF13086 AAA domain AMIS_60190 PF13086 AAA domain AMIS_60190 PF13195 Protein of unknown function (DUF4011) AMIS_60190 PF13195 Protein of unknown function (DUF4011) AMIS_60190 PF13087 AAA domain AMIS_6020 PF00338 Ribosomal protein S10p/S20e AMIS_60200 PF00570 HRDC domain AMIS_60200 PF13361 UvrD-like helicase C-terminal domain AMIS_60210 PF00069 Protein kinase domain AMIS_60220 PF13361 UvrD-like helicase C-terminal domain AMIS_60220 PF00570 HRDC domain AMIS_60250 PF18337 RapA N-terminal Tudor like domain AMIS_60250 PF00176 SNF2 family N-terminal domain AMIS_60250 PF12137 RNA polymerase recycling family C-terminal AMIS_60250 PF00271 Helicase conserved C-terminal domain AMIS_60250 PF18339 RapA N-terminal Tudor like domain 1 AMIS_60260 PF00069 Protein kinase domain AMIS_60260 PF13360 PQQ-like domain AMIS_6030 PF00297 Ribosomal protein L3 AMIS_60330 PF04542 Sigma-70 region 2 AMIS_60330 PF08281 Sigma-70, region 4 AMIS_60340 PF07690 Major Facilitator Superfamily AMIS_60350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMIS_60350 PF01926 50S ribosome-binding GTPase AMIS_60360 PF02224 Cytidylate kinase AMIS_60390 PF00925 GTP cyclohydrolase II AMIS_6040 PF00573 Ribosomal protein L4/L1 family AMIS_60400 PF07690 Major Facilitator Superfamily AMIS_60470 PF13443 Cro/C1-type HTH DNA-binding domain AMIS_6050 PF00276 Ribosomal protein L23 AMIS_60510 PF00704 Glycosyl hydrolases family 18 AMIS_60520 PF00246 Zinc carboxypeptidase AMIS_60550 PF00089 Trypsin AMIS_60590 PF00501 AMP-binding enzyme AMIS_6060 PF00181 Ribosomal Proteins L2, RNA binding domain AMIS_6060 PF03947 Ribosomal Proteins L2, C-terminal domain AMIS_60610 PF00108 Thiolase, N-terminal domain AMIS_60610 PF02803 Thiolase, C-terminal domain AMIS_60620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIS_60620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIS_60620 PF00378 Enoyl-CoA hydratase/isomerase AMIS_60630 PF02585 GlcNAc-PI de-N-acetylase AMIS_60670 PF00664 ABC transporter transmembrane region AMIS_60670 PF00005 ABC transporter AMIS_60680 PF00501 AMP-binding enzyme AMIS_60680 PF13193 AMP-binding enzyme C-terminal domain AMIS_60690 PF03707 Bacterial signalling protein N terminal repeat AMIS_60690 PF00563 EAL domain AMIS_60690 PF00990 Diguanylate cyclase, GGDEF domain AMIS_6070 PF00203 Ribosomal protein S19 AMIS_60730 PF07690 Major Facilitator Superfamily AMIS_60740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_60740 PF03466 LysR substrate binding domain AMIS_60760 PF00849 RNA pseudouridylate synthase AMIS_60760 PF01479 S4 domain AMIS_60770 PF04079 Segregation and condensation complex subunit ScpB AMIS_60780 PF02616 Segregation and condensation protein ScpA AMIS_60790 PF13302 Acetyltransferase (GNAT) domain AMIS_6080 PF00237 Ribosomal protein L22p/L17e AMIS_60800 PF01209 ubiE/COQ5 methyltransferase family AMIS_60820 PF13614 AAA domain AMIS_60830 PF02899 Phage integrase, N-terminal SAM-like domain AMIS_60830 PF00589 Phage integrase family AMIS_60840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMIS_60840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMIS_60880 PF00293 NUDIX domain AMIS_60890 PF00117 Glutamine amidotransferase class-I AMIS_60890 PF06418 CTP synthase N-terminus AMIS_6090 PF00189 Ribosomal protein S3, C-terminal domain AMIS_6090 PF07650 KH domain AMIS_60940 PF11382 Copper transport outer membrane protein, MctB AMIS_60960 PF02463 RecF/RecN/SMC N terminal domain AMIS_60970 PF01513 ATP-NAD kinase AMIS_60980 PF01728 FtsJ-like methyltransferase AMIS_60980 PF01479 S4 domain AMIS_6100 PF00252 Ribosomal protein L16p/L10e AMIS_61020 PF00672 HAMP domain AMIS_61020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_61040 PF18407 GCN5-related N-acetyltransferase like domain AMIS_61040 PF13344 Haloacid dehalogenase-like hydrolase AMIS_61080 PF00579 tRNA synthetases class I (W and Y) AMIS_61090 PF03976 Polyphosphate kinase 2 (PPK2) AMIS_6110 PF00831 Ribosomal L29 protein AMIS_61100 PF00391 PEP-utilising enzyme, mobile domain AMIS_61100 PF02896 PEP-utilising enzyme, TIM barrel domain AMIS_61100 PF05524 PEP-utilising enzyme, N-terminal AMIS_61110 PF00381 PTS HPr component phosphorylation site AMIS_61120 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_61120 PF00107 Zinc-binding dehydrogenase AMIS_61130 PF00381 PTS HPr component phosphorylation site AMIS_61130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMIS_61140 PF02378 Phosphotransferase system, EIIC AMIS_61140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMIS_61140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMIS_61150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMIS_61150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMIS_61150 PF02378 Phosphotransferase system, EIIC AMIS_61160 PF00294 pfkB family carbohydrate kinase AMIS_61170 PF08220 DeoR-like helix-turn-helix domain AMIS_61170 PF00455 DeoR C terminal sensor domain AMIS_61190 PF05191 Adenylate kinase, active site lid AMIS_6120 PF00366 Ribosomal protein S17 AMIS_61220 PF00491 Arginase family AMIS_61270 PF02245 Methylpurine-DNA glycosylase (MPG) AMIS_61290 PF13538 UvrD-like helicase C-terminal domain AMIS_6130 PF00238 Ribosomal protein L14p/L23e AMIS_61330 PF00571 CBS domain AMIS_61340 PF01256 Carbohydrate kinase AMIS_61350 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_61370 PF01925 Sulfite exporter TauE/SafE AMIS_61380 PF00563 EAL domain AMIS_61380 PF00990 Diguanylate cyclase, GGDEF domain AMIS_61380 PF03707 Bacterial signalling protein N terminal repeat AMIS_6140 PF00467 KOW motif AMIS_6140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMIS_61400 PF00392 Bacterial regulatory proteins, gntR family AMIS_61400 PF07729 FCD domain AMIS_61420 PF00128 Alpha amylase, catalytic domain AMIS_61420 PF02806 Alpha amylase, C-terminal all-beta domain AMIS_61420 PF03714 Bacterial pullanase-associated domain AMIS_61430 PF02903 Alpha amylase, N-terminal ig-like domain AMIS_61430 PF16657 Maltogenic Amylase, C-terminal domain AMIS_61430 PF00128 Alpha amylase, catalytic domain AMIS_61440 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_61450 PF14785 Maltose transport system permease protein MalF P2 domain AMIS_61450 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_61470 PF00356 Bacterial regulatory proteins, lacI family AMIS_61480 PF00356 Bacterial regulatory proteins, lacI family AMIS_61490 PF14698 Argininosuccinate lyase C-terminal AMIS_61490 PF00206 Lyase AMIS_6150 PF00673 ribosomal L5P family C-terminus AMIS_6150 PF00281 Ribosomal protein L5 AMIS_61500 PF01546 Peptidase family M20/M25/M40 AMIS_61500 PF07687 Peptidase dimerisation domain AMIS_61510 PF00764 Arginosuccinate synthase AMIS_61530 PF01316 Arginine repressor, DNA binding domain AMIS_61530 PF02863 Arginine repressor, C-terminal domain AMIS_61540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMIS_61540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMIS_61550 PF00202 Aminotransferase class-III AMIS_61560 PF00696 Amino acid kinase family AMIS_61570 PF01960 ArgJ family AMIS_61580 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMIS_61580 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIS_6160 PF00253 Ribosomal protein S14p/S29e AMIS_61610 PF13649 Methyltransferase domain AMIS_61620 PF01638 HxlR-like helix-turn-helix AMIS_61630 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_61630 PF14310 Fibronectin type III-like domain AMIS_61630 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_61640 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIS_61650 PF03781 Sulfatase-modifying factor enzyme 1 AMIS_61650 PF12867 DinB superfamily AMIS_61670 PF10017 Histidine-specific methyltransferase, SAM-dependent AMIS_6170 PF00410 Ribosomal protein S8 AMIS_61700 PF05762 VWA domain containing CoxE-like protein AMIS_61720 PF07728 AAA domain (dynein-related subfamily) AMIS_61730 PF13569 Domain of unknown function (DUF4132) AMIS_6180 PF00347 Ribosomal protein L6 AMIS_61800 PF04389 Peptidase family M28 AMIS_61800 PF04151 Bacterial pre-peptidase C-terminal domain AMIS_61810 PF03147 Ferredoxin-fold anticodon binding domain AMIS_61810 PF03483 B3/4 domain AMIS_61810 PF01588 Putative tRNA binding domain AMIS_61810 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMIS_61810 PF03484 tRNA synthetase B5 domain AMIS_61820 PF01409 tRNA synthetases class II core domain (F) AMIS_61820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMIS_61830 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIS_61830 PF00588 SpoU rRNA Methylase family AMIS_61840 PF00453 Ribosomal protein L20 AMIS_61850 PF01632 Ribosomal protein L35 AMIS_61860 PF00707 Translation initiation factor IF-3, C-terminal domain AMIS_61860 PF05198 Translation initiation factor IF-3, N-terminal domain AMIS_61880 PF08029 HisG, C-terminal domain AMIS_61880 PF01634 ATP phosphoribosyltransferase AMIS_61890 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMIS_6190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMIS_61900 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIS_61910 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_61920 PF00005 ABC transporter AMIS_61930 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMIS_61940 PF00925 GTP cyclohydrolase II AMIS_61940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMIS_61950 PF00677 Lumazine binding domain AMIS_61960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIS_61960 PF01872 RibD C-terminal domain AMIS_61980 PF01553 Acyltransferase AMIS_61990 PF00072 Response regulator receiver domain AMIS_61990 PF00486 Transcriptional regulatory protein, C terminal AMIS_6200 PF00333 Ribosomal protein S5, N-terminal domain AMIS_6200 PF03719 Ribosomal protein S5, C-terminal domain AMIS_62000 PF00834 Ribulose-phosphate 3 epimerase family AMIS_62020 PF01189 16S rRNA methyltransferase RsmB/F AMIS_62020 PF01029 NusB family AMIS_62030 PF00551 Formyl transferase AMIS_62030 PF02911 Formyl transferase, C-terminal domain AMIS_62040 PF01327 Polypeptide deformylase AMIS_62050 PF17764 3′ DNA-binding domain (3′BD) AMIS_62060 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMIS_62060 PF02772 S-adenosylmethionine synthetase, central domain AMIS_62060 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMIS_62070 PF04127 DNA / pantothenate metabolism flavoprotein AMIS_62070 PF02441 Flavoprotein AMIS_62080 PF01192 RNA polymerase Rpb6 AMIS_62090 PF00625 Guanylate kinase AMIS_6210 PF00327 Ribosomal protein L30p/L7e AMIS_62110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMIS_62120 PF00202 Aminotransferase class-III AMIS_62130 PF01180 Dihydroorotate dehydrogenase AMIS_62140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMIS_62140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIS_62140 PF02142 MGS-like domain AMIS_62150 PF00117 Glutamine amidotransferase class-I AMIS_62150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMIS_62160 PF01979 Amidohydrolase family AMIS_62170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMIS_62170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMIS_62180 PF00156 Phosphoribosyl transferase domain AMIS_6220 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMIS_62200 PF01029 NusB family AMIS_62210 PF08207 Elongation factor P (EF-P) KOW-like domain AMIS_62210 PF09285 Elongation factor P, C-terminal AMIS_62210 PF01132 Elongation factor P (EF-P) OB domain AMIS_62220 PF01220 Dehydroquinase class II AMIS_62230 PF01761 3-dehydroquinate synthase AMIS_62240 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_62240 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_62240 PF17871 AAA lid domain AMIS_62240 PF07724 AAA domain (Cdc48 subfamily) AMIS_62240 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_62250 PF01522 Polysaccharide deacetylase AMIS_62250 PF11738 Protein of unknown function (DUF3298) AMIS_62250 PF13739 Deacetylase PdaC AMIS_62260 PF01202 Shikimate kinase AMIS_62270 PF01264 Chorismate synthase AMIS_62280 PF07690 Major Facilitator Superfamily AMIS_62290 PF08501 Shikimate dehydrogenase substrate binding domain AMIS_62290 PF01488 Shikimate / quinate 5-dehydrogenase AMIS_62290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMIS_6230 PF00344 SecY translocase AMIS_62310 PF02618 YceG-like family AMIS_62320 PF03652 Holliday junction resolvase AMIS_62330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIS_62330 PF01411 tRNA synthetases class II (A) AMIS_62330 PF02272 DHHA1 domain AMIS_62370 PF12002 MgsA AAA+ ATPase C terminal AMIS_62370 PF16193 AAA C-terminal domain AMIS_62370 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_6240 PF05191 Adenylate kinase, active site lid AMIS_62420 PF02938 GAD domain AMIS_62420 PF01336 OB-fold nucleic acid binding domain AMIS_62420 PF00152 tRNA synthetases class II (D, K and N) AMIS_62470 PF02838 Glycosyl hydrolase family 20, domain 2 AMIS_62470 PF07691 PA14 domain AMIS_62470 PF00728 Glycosyl hydrolase family 20, catalytic domain AMIS_62480 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_62490 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_6250 PF00557 Metallopeptidase family M24 AMIS_62520 PF01979 Amidohydrolase family AMIS_62530 PF01042 Endoribonuclease L-PSP AMIS_62540 PF00069 Protein kinase domain AMIS_62550 PF01757 Acyltransferase family AMIS_62560 PF00547 Urease, gamma subunit AMIS_62570 PF00699 Urease beta subunit AMIS_62580 PF00449 Urease alpha-subunit, N-terminal domain AMIS_62580 PF01979 Amidohydrolase family AMIS_62590 PF01730 UreF AMIS_62600 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMIS_62610 PF01774 UreD urease accessory protein AMIS_62620 PF04542 Sigma-70 region 2 AMIS_62620 PF04545 Sigma-70, region 4 AMIS_62620 PF04539 Sigma-70 region 3 AMIS_62650 PF00069 Protein kinase domain AMIS_62660 PF02875 Mur ligase family, glutamate ligase domain AMIS_62660 PF08245 Mur ligase middle domain AMIS_62660 PF08443 RimK-like ATP-grasp domain AMIS_62670 PF03575 Peptidase family S51 AMIS_62690 PF01638 HxlR-like helix-turn-helix AMIS_6270 PF01176 Translation initiation factor 1A / IF-1 AMIS_62710 PF13393 Histidyl-tRNA synthetase AMIS_62710 PF03129 Anticodon binding domain AMIS_62720 PF00753 Metallo-beta-lactamase superfamily AMIS_62750 PF13291 ACT domain AMIS_62750 PF04607 Region found in RelA / SpoT proteins AMIS_62750 PF02824 TGS domain AMIS_62760 PF00156 Phosphoribosyl transferase domain AMIS_62770 PF07549 SecD/SecF GG Motif AMIS_62770 PF02355 Protein export membrane protein AMIS_62780 PF07549 SecD/SecF GG Motif AMIS_62780 PF02355 Protein export membrane protein AMIS_62790 PF02699 Preprotein translocase subunit AMIS_6280 PF00444 Ribosomal protein L36 AMIS_62800 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMIS_62800 PF05491 RuvB C-terminal winged helix domain AMIS_62800 PF17864 RuvB AAA lid domain AMIS_62810 PF01330 RuvA N terminal domain AMIS_62810 PF07499 RuvA, C-terminal domain AMIS_62820 PF02075 Crossover junction endodeoxyribonuclease RuvC AMIS_62840 PF01709 Transcriptional regulator AMIS_62850 PF01174 SNO glutamine amidotransferase family AMIS_62860 PF01680 SOR/SNZ family AMIS_62880 PF13439 Glycosyltransferase Family 4 AMIS_62890 PF03279 Bacterial lipid A biosynthesis acyltransferase AMIS_6290 PF00416 Ribosomal protein S13/S18 AMIS_62910 PF03764 Elongation factor G, domain IV AMIS_62910 PF00679 Elongation factor G C-terminus AMIS_62910 PF00009 Elongation factor Tu GTP binding domain AMIS_62910 PF14492 Elongation Factor G, domain II AMIS_62910 PF03144 Elongation factor Tu domain 2 AMIS_62920 PF01494 FAD binding domain AMIS_62940 PF01230 HIT domain AMIS_62950 PF03707 Bacterial signalling protein N terminal repeat AMIS_62950 PF00563 EAL domain AMIS_62950 PF00990 Diguanylate cyclase, GGDEF domain AMIS_62960 PF03129 Anticodon binding domain AMIS_62960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIS_62960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMIS_62980 PF00486 Transcriptional regulatory protein, C terminal AMIS_62980 PF00072 Response regulator receiver domain AMIS_62990 PF00512 His Kinase A (phospho-acceptor) domain AMIS_62990 PF00672 HAMP domain AMIS_62990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_630 PF07228 Stage II sporulation protein E (SpoIIE) AMIS_630 PF00672 HAMP domain AMIS_6300 PF00411 Ribosomal protein S11 AMIS_63020 PF00962 Adenosine/AMP deaminase AMIS_63040 PF00248 Aldo/keto reductase family AMIS_63060 PF00313 'Cold-shock' DNA-binding domain AMIS_6310 PF00163 Ribosomal protein S4/S9 N-terminal domain AMIS_6310 PF01479 S4 domain AMIS_63140 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_63140 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_63160 PF00296 Luciferase-like monooxygenase AMIS_63170 PF00570 HRDC domain AMIS_63170 PF00270 DEAD/DEAH box helicase AMIS_63170 PF00271 Helicase conserved C-terminal domain AMIS_63170 PF16124 RecQ zinc-binding AMIS_63170 PF09382 RQC domain AMIS_6320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMIS_6320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMIS_6320 PF01000 RNA polymerase Rpb3/RpoA insert domain AMIS_63230 PF07732 Multicopper oxidase AMIS_63250 PF13458 Periplasmic binding protein AMIS_63260 PF02653 Branched-chain amino acid transport system / permease component AMIS_63280 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIS_63280 PF00005 ABC transporter AMIS_63290 PF00005 ABC transporter AMIS_6330 PF01196 Ribosomal protein L17 AMIS_63320 PF00753 Metallo-beta-lactamase superfamily AMIS_63330 PF00211 Adenylate and Guanylate cyclase catalytic domain AMIS_63330 PF13191 AAA ATPase domain AMIS_63360 PF01494 FAD binding domain AMIS_6340 PF01416 tRNA pseudouridine synthase AMIS_63400 PF04542 Sigma-70 region 2 AMIS_63400 PF08281 Sigma-70, region 4 AMIS_63410 PF00196 Bacterial regulatory proteins, luxR family AMIS_63410 PF00072 Response regulator receiver domain AMIS_63440 PF00005 ABC transporter AMIS_63450 PF13439 Glycosyltransferase Family 4 AMIS_63450 PF00534 Glycosyl transferases group 1 AMIS_63490 PF03364 Polyketide cyclase / dehydrase and lipid transport AMIS_63580 PF13419 Haloacid dehalogenase-like hydrolase AMIS_6360 PF05175 Methyltransferase small domain AMIS_6360 PF08468 Methyltransferase small domain N-terminal AMIS_63640 PF17871 AAA lid domain AMIS_63640 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_63640 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_63640 PF07724 AAA domain (Cdc48 subfamily) AMIS_63640 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_63670 PF02678 Pirin AMIS_63670 PF05726 Pirin C-terminal cupin domain AMIS_6370 PF00005 ABC transporter AMIS_63720 PF03561 Allantoicase repeat AMIS_63730 PF01979 Amidohydrolase family AMIS_63780 PF01979 Amidohydrolase family AMIS_63790 PF01014 Uricase AMIS_6380 PF02581 Thiamine monophosphate synthase AMIS_63800 PF00576 HIUase/Transthyretin family AMIS_63810 PF09349 OHCU decarboxylase AMIS_63810 PF01014 Uricase AMIS_63820 PF04408 Helicase associated domain (HA2) AMIS_63820 PF00271 Helicase conserved C-terminal domain AMIS_63820 PF00270 DEAD/DEAH box helicase AMIS_63820 PF08482 ATP-dependent helicase C-terminal AMIS_63830 PF00990 Diguanylate cyclase, GGDEF domain AMIS_63830 PF00563 EAL domain AMIS_63830 PF03707 Bacterial signalling protein N terminal repeat AMIS_63870 PF01809 Putative membrane protein insertion efficiency factor AMIS_63880 PF00128 Alpha amylase, catalytic domain AMIS_63880 PF11941 Domain of unknown function (DUF3459) AMIS_63890 PF00128 Alpha amylase, catalytic domain AMIS_6390 PF05690 Thiazole biosynthesis protein ThiG AMIS_6390 PF01266 FAD dependent oxidoreductase AMIS_63900 PF00128 Alpha amylase, catalytic domain AMIS_63900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIS_63920 PF13439 Glycosyltransferase Family 4 AMIS_63920 PF00534 Glycosyl transferases group 1 AMIS_63930 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMIS_63930 PF02558 Ketopantoate reductase PanE/ApbA AMIS_63950 PF00999 Sodium/hydrogen exchanger family AMIS_64040 PF00989 PAS fold AMIS_64040 PF00512 His Kinase A (phospho-acceptor) domain AMIS_64040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_64050 PF02390 Putative methyltransferase AMIS_64080 PF00561 alpha/beta hydrolase fold AMIS_64080 PF08386 TAP-like protein AMIS_64090 PF07995 Glucose / Sorbosone dehydrogenase AMIS_6410 PF05690 Thiazole biosynthesis protein ThiG AMIS_64120 PF00474 Sodium:solute symporter family AMIS_64130 PF13419 Haloacid dehalogenase-like hydrolase AMIS_64140 PF00535 Glycosyl transferase family 2 AMIS_64150 PF00296 Luciferase-like monooxygenase AMIS_6420 PF02581 Thiamine monophosphate synthase AMIS_64210 PF11774 Lsr2 AMIS_64230 PF07943 Penicillin-binding protein 5, C-terminal domain AMIS_64230 PF00768 D-alanyl-D-alanine carboxypeptidase AMIS_64240 PF04542 Sigma-70 region 2 AMIS_64240 PF04539 Sigma-70 region 3 AMIS_64240 PF04545 Sigma-70, region 4 AMIS_64260 PF13538 UvrD-like helicase C-terminal domain AMIS_64280 PF04542 Sigma-70 region 2 AMIS_64280 PF04545 Sigma-70, region 4 AMIS_64280 PF04539 Sigma-70 region 3 AMIS_64290 PF00270 DEAD/DEAH box helicase AMIS_64290 PF00271 Helicase conserved C-terminal domain AMIS_6430 PF08543 Phosphomethylpyrimidine kinase AMIS_64380 PF02146 Sir2 family AMIS_64390 PF00356 Bacterial regulatory proteins, lacI family AMIS_6440 PF13667 ThiC-associated domain AMIS_6440 PF01964 Radical SAM ThiC family AMIS_64400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIS_64410 PF00005 ABC transporter AMIS_64410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_64420 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_64430 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_64430 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIS_64440 PF00005 ABC transporter AMIS_64440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_64450 PF00232 Glycosyl hydrolase family 1 AMIS_64480 PF00248 Aldo/keto reductase family AMIS_64500 PF00521 DNA gyrase/topoisomerase IV, subunit A AMIS_64500 PF03989 DNA gyrase C-terminal domain, beta-propeller AMIS_64510 PF01751 Toprim domain AMIS_64510 PF00204 DNA gyrase B AMIS_64510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_64510 PF00986 DNA gyrase B subunit, carboxyl terminus AMIS_64520 PF00211 Adenylate and Guanylate cyclase catalytic domain AMIS_64520 PF00672 HAMP domain AMIS_64530 PF00196 Bacterial regulatory proteins, luxR family AMIS_64560 PF00512 His Kinase A (phospho-acceptor) domain AMIS_64560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_64560 PF00672 HAMP domain AMIS_64570 PF00486 Transcriptional regulatory protein, C terminal AMIS_64570 PF00072 Response regulator receiver domain AMIS_64580 PF13409 Glutathione S-transferase, N-terminal domain AMIS_64610 PF07728 AAA domain (dynein-related subfamily) AMIS_64630 PF05762 VWA domain containing CoxE-like protein AMIS_64730 PF00709 Adenylosuccinate synthetase AMIS_64780 PF04075 F420H(2)-dependent quinone reductase AMIS_64790 PF00082 Subtilase family AMIS_64800 PF00174 Oxidoreductase molybdopterin binding domain AMIS_64810 PF00042 Globin AMIS_64810 PF00970 Oxidoreductase FAD-binding domain AMIS_64810 PF00175 Oxidoreductase NAD-binding domain AMIS_64830 PF16874 Glycosyl hydrolase family 36 C-terminal domain AMIS_64830 PF16875 Glycosyl hydrolase family 36 N-terminal domain AMIS_64850 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_64860 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_64870 PF08533 Beta-galactosidase C-terminal domain AMIS_64870 PF02449 Beta-galactosidase AMIS_64870 PF08532 Beta-galactosidase trimerisation domain AMIS_64880 PF00356 Bacterial regulatory proteins, lacI family AMIS_64900 PF13472 GDSL-like Lipase/Acylhydrolase family AMIS_64920 PF00069 Protein kinase domain AMIS_64930 PF00072 Response regulator receiver domain AMIS_64930 PF13188 PAS domain AMIS_64930 PF08448 PAS fold AMIS_64930 PF00512 His Kinase A (phospho-acceptor) domain AMIS_64930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_64940 PF14572 Phosphoribosyl synthetase-associated domain AMIS_64940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMIS_64950 PF00005 ABC transporter AMIS_64960 PF00005 ABC transporter AMIS_650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_650 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_650 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMIS_650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_65000 PF04973 Nicotinamide mononucleotide transporter AMIS_65010 PF07690 Major Facilitator Superfamily AMIS_65020 PF00440 Bacterial regulatory proteins, tetR family AMIS_65030 PF00128 Alpha amylase, catalytic domain AMIS_65030 PF03423 Carbohydrate binding domain (family 25) AMIS_65030 PF01373 Glycosyl hydrolase family 14 AMIS_65100 PF01613 Flavin reductase like domain AMIS_65140 PF00486 Transcriptional regulatory protein, C terminal AMIS_65140 PF03704 Bacterial transcriptional activator domain AMIS_65150 PF00072 Response regulator receiver domain AMIS_65150 PF00486 Transcriptional regulatory protein, C terminal AMIS_65160 PF06745 KaiC AMIS_6520 PF03259 Roadblock/LC7 domain AMIS_65210 PF07730 Histidine kinase AMIS_65220 PF00072 Response regulator receiver domain AMIS_65220 PF00196 Bacterial regulatory proteins, luxR family AMIS_65270 PF00561 alpha/beta hydrolase fold AMIS_65280 PF00931 NB-ARC domain AMIS_65280 PF03704 Bacterial transcriptional activator domain AMIS_65280 PF00486 Transcriptional regulatory protein, C terminal AMIS_65300 PF04686 Streptomyces sporulation and cell division protein, SsgA AMIS_65320 PF02082 Transcriptional regulator AMIS_65360 PF00072 Response regulator receiver domain AMIS_65360 PF00990 Diguanylate cyclase, GGDEF domain AMIS_65370 PF00561 alpha/beta hydrolase fold AMIS_65390 PF04978 Protein of unknown function (DUF664) AMIS_65410 PF01569 PAP2 superfamily AMIS_65430 PF00781 Diacylglycerol kinase catalytic domain AMIS_65430 PF02142 MGS-like domain AMIS_65490 PF00089 Trypsin AMIS_65490 PF02983 Alpha-lytic protease prodomain AMIS_65500 PF00072 Response regulator receiver domain AMIS_65500 PF00486 Transcriptional regulatory protein, C terminal AMIS_65510 PF01613 Flavin reductase like domain AMIS_65520 PF03358 NADPH-dependent FMN reductase AMIS_65530 PF05922 Peptidase inhibitor I9 AMIS_65530 PF00082 Subtilase family AMIS_65540 PF00196 Bacterial regulatory proteins, luxR family AMIS_65540 PF00072 Response regulator receiver domain AMIS_65550 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMIS_65550 PF07730 Histidine kinase AMIS_65550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_65550 PF00672 HAMP domain AMIS_65590 PF03211 Pectate lyase AMIS_6560 PF00572 Ribosomal protein L13 AMIS_65600 PF13419 Haloacid dehalogenase-like hydrolase AMIS_65610 PF01965 DJ-1/PfpI family AMIS_65620 PF00857 Isochorismatase family AMIS_65640 PF13411 MerR HTH family regulatory protein AMIS_65660 PF00294 pfkB family carbohydrate kinase AMIS_65670 PF01081 KDPG and KHG aldolase AMIS_65690 PF00196 Bacterial regulatory proteins, luxR family AMIS_6570 PF00380 Ribosomal protein S9/S16 AMIS_65710 PF00107 Zinc-binding dehydrogenase AMIS_65710 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_65740 PF03073 TspO/MBR family AMIS_65770 PF00862 Sucrose synthase AMIS_65770 PF00534 Glycosyl transferases group 1 AMIS_65780 PF13439 Glycosyltransferase Family 4 AMIS_6580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIS_6580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIS_6580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIS_6580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIS_65810 PF01209 ubiE/COQ5 methyltransferase family AMIS_65820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_65820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_65840 PF00266 Aminotransferase class-V AMIS_65850 PF03301 Tryptophan 2,3-dioxygenase AMIS_65870 PF00672 HAMP domain AMIS_65870 PF17200 Single Cache domain 2 AMIS_65870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_65880 PF00356 Bacterial regulatory proteins, lacI family AMIS_65890 PF13416 Bacterial extracellular solute-binding protein AMIS_6590 PF00155 Aminotransferase class I and II AMIS_65900 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_65910 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_65920 PF00128 Alpha amylase, catalytic domain AMIS_65940 PF01740 STAS domain AMIS_65940 PF00916 Sulfate permease family AMIS_65950 PF16363 GDP-mannose 4,6 dehydratase AMIS_65960 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIS_65960 PF14403 Circularly permuted ATP-grasp type 2 AMIS_65970 PF00733 Asparagine synthase AMIS_65970 PF13537 Glutamine amidotransferase domain AMIS_65980 PF00326 Prolyl oligopeptidase family AMIS_660 PF00082 Subtilase family AMIS_66020 PF00072 Response regulator receiver domain AMIS_66020 PF08448 PAS fold AMIS_66020 PF00512 His Kinase A (phospho-acceptor) domain AMIS_66020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_66020 PF13188 PAS domain AMIS_66030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_66040 PF01513 ATP-NAD kinase AMIS_66070 PF03551 Transcriptional regulator PadR-like family AMIS_66070 PF13847 Methyltransferase domain AMIS_6610 PF01380 SIS domain AMIS_66100 PF13302 Acetyltransferase (GNAT) domain AMIS_66140 PF00664 ABC transporter transmembrane region AMIS_66140 PF00005 ABC transporter AMIS_66150 PF00664 ABC transporter transmembrane region AMIS_66150 PF00005 ABC transporter AMIS_66170 PF00196 Bacterial regulatory proteins, luxR family AMIS_66170 PF00072 Response regulator receiver domain AMIS_6620 PF06259 Alpha/beta hydrolase AMIS_66200 PF13732 Domain of unknown function (DUF4162) AMIS_66200 PF00005 ABC transporter AMIS_66220 PF00005 ABC transporter AMIS_66230 PF00075 RNase H AMIS_66250 PF01068 ATP dependent DNA ligase domain AMIS_66250 PF04679 ATP dependent DNA ligase C terminal region AMIS_66250 PF13298 DNA polymerase Ligase (LigD) AMIS_66270 PF07730 Histidine kinase AMIS_66280 PF00072 Response regulator receiver domain AMIS_66280 PF00196 Bacterial regulatory proteins, luxR family AMIS_66290 PF08447 PAS fold AMIS_66290 PF00990 Diguanylate cyclase, GGDEF domain AMIS_66290 PF00563 EAL domain AMIS_66290 PF08448 PAS fold AMIS_66300 PF00296 Luciferase-like monooxygenase AMIS_66330 PF00817 impB/mucB/samB family AMIS_66330 PF11799 impB/mucB/samB family C-terminal domain AMIS_66340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIS_66350 PF02514 CobN/Magnesium Chelatase AMIS_66360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIS_66360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIS_66370 PF02570 Precorrin-8X methylmutase AMIS_66380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIS_6640 PF01648 4'-phosphopantetheinyl transferase superfamily AMIS_66450 PF00534 Glycosyl transferases group 1 AMIS_66450 PF13439 Glycosyltransferase Family 4 AMIS_66460 PF00535 Glycosyl transferase family 2 AMIS_66480 PF01266 FAD dependent oxidoreductase AMIS_66490 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMIS_66490 PF01571 Aminomethyltransferase folate-binding domain AMIS_66490 PF16350 FAD dependent oxidoreductase central domain AMIS_66490 PF01266 FAD dependent oxidoreductase AMIS_6650 PF01256 Carbohydrate kinase AMIS_6650 PF03853 YjeF-related protein N-terminus AMIS_66520 PF08021 Siderophore-interacting FAD-binding domain AMIS_66520 PF04954 Siderophore-interacting protein AMIS_66530 PF07690 Major Facilitator Superfamily AMIS_66560 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AMIS_66560 PF01648 4'-phosphopantetheinyl transferase superfamily AMIS_66570 PF00343 Carbohydrate phosphorylase AMIS_6660 PF00842 Alanine racemase, C-terminal domain AMIS_6660 PF01168 Alanine racemase, N-terminal domain AMIS_66620 PF00746 LPXTG cell wall anchor motif AMIS_66640 PF00348 Polyprenyl synthetase AMIS_66650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_66650 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_66650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_66670 PF00440 Bacterial regulatory proteins, tetR family AMIS_66670 PF17938 Tetracyclin repressor-like, C-terminal domain AMIS_66680 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMIS_66680 PF08501 Shikimate dehydrogenase substrate binding domain AMIS_6670 PF00561 alpha/beta hydrolase fold AMIS_66720 PF00589 Phage integrase family AMIS_66740 PF13519 von Willebrand factor type A domain AMIS_66770 PF13519 von Willebrand factor type A domain AMIS_66770 PF07584 Aerotolerance regulator N-terminal AMIS_66780 PF00092 von Willebrand factor type A domain AMIS_66780 PF07584 Aerotolerance regulator N-terminal AMIS_66790 PF01882 Protein of unknown function DUF58 AMIS_6680 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMIS_66800 PF07726 ATPase family associated with various cellular activities (AAA) AMIS_66800 PF17863 AAA lid domain AMIS_66810 PF13180 PDZ domain AMIS_66820 PF00331 Glycosyl hydrolase family 10 AMIS_66820 PF06452 Carbohydrate family 9 binding domain-like AMIS_66820 PF02018 Carbohydrate binding domain AMIS_66840 PF07728 AAA domain (dynein-related subfamily) AMIS_66850 PF05762 VWA domain containing CoxE-like protein AMIS_66880 PF03176 MMPL family AMIS_66890 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_66890 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_66890 PF14765 Polyketide synthase dehydratase AMIS_66890 PF08659 KR domain AMIS_66890 PF00550 Phosphopantetheine attachment site AMIS_66890 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_66890 PF00698 Acyl transferase domain AMIS_6690 PF03167 Uracil DNA glycosylase superfamily AMIS_6700 PF00814 Glycoprotease family AMIS_6700 PF00583 Acetyltransferase (GNAT) family AMIS_67070 PF02384 N-6 DNA Methylase AMIS_67090 PF18766 SWI2/SNF2 ATPase AMIS_67090 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMIS_67090 PF11867 Domain of unknown function (DUF3387) AMIS_67190 PF00459 Inositol monophosphatase family AMIS_6720 PF00814 Glycoprotease family AMIS_67230 PF02899 Phage integrase, N-terminal SAM-like domain AMIS_67230 PF00589 Phage integrase family AMIS_67290 PF13180 PDZ domain AMIS_67390 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_67390 PF00175 Oxidoreductase NAD-binding domain AMIS_67390 PF00970 Oxidoreductase FAD-binding domain AMIS_6740 PF00005 ABC transporter AMIS_6740 PF00664 ABC transporter transmembrane region AMIS_67400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIS_67410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIS_67420 PF02571 Precorrin-6x reductase CbiJ/CobK AMIS_67490 PF01804 Penicillin amidase AMIS_6750 PF00005 ABC transporter AMIS_6750 PF00664 ABC transporter transmembrane region AMIS_67500 PF04183 IucA / IucC family AMIS_67500 PF06276 Ferric iron reductase FhuF-like transporter AMIS_67510 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMIS_67520 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMIS_67530 PF16483 Beta-1,3-glucanase AMIS_67530 PF00652 Ricin-type beta-trefoil lectin domain AMIS_67540 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMIS_67550 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_67560 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_67570 PF01547 Bacterial extracellular solute-binding protein AMIS_67580 PF00356 Bacterial regulatory proteins, lacI family AMIS_6760 PF00118 TCP-1/cpn60 chaperonin family AMIS_67610 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_67610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_67610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_67610 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMIS_67620 PF13426 PAS domain AMIS_67620 PF00990 Diguanylate cyclase, GGDEF domain AMIS_67620 PF00563 EAL domain AMIS_67660 PF00196 Bacterial regulatory proteins, luxR family AMIS_67660 PF00072 Response regulator receiver domain AMIS_67680 PF00487 Fatty acid desaturase AMIS_67690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_67690 PF00205 Thiamine pyrophosphate enzyme, central domain AMIS_67690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIS_6770 PF00166 Chaperonin 10 Kd subunit AMIS_67730 PF05199 GMC oxidoreductase AMIS_67750 PF13286 Phosphohydrolase-associated domain AMIS_67750 PF01966 HD domain AMIS_67770 PF12706 Beta-lactamase superfamily domain AMIS_6790 PF04073 Aminoacyl-tRNA editing domain AMIS_67900 PF04545 Sigma-70, region 4 AMIS_67900 PF04542 Sigma-70 region 2 AMIS_67920 PF13476 AAA domain AMIS_67930 PF12320 Type 5 capsule protein repressor C-terminal domain AMIS_67930 PF00149 Calcineurin-like phosphoesterase AMIS_67990 PF06968 Biotin and Thiamin Synthesis associated domain AMIS_67990 PF04055 Radical SAM superfamily AMIS_6800 PF13407 Periplasmic binding protein domain AMIS_68000 PF00155 Aminotransferase class I and II AMIS_68050 PF00990 Diguanylate cyclase, GGDEF domain AMIS_68050 PF03707 Bacterial signalling protein N terminal repeat AMIS_68050 PF00563 EAL domain AMIS_68060 PF11774 Lsr2 AMIS_68070 PF16363 GDP-mannose 4,6 dehydratase AMIS_6810 PF00005 ABC transporter AMIS_68130 PF04679 ATP dependent DNA ligase C terminal region AMIS_68130 PF01068 ATP dependent DNA ligase domain AMIS_68140 PF00561 alpha/beta hydrolase fold AMIS_68150 PF02254 TrkA-N domain AMIS_68150 PF07885 Ion channel AMIS_68170 PF01068 ATP dependent DNA ligase domain AMIS_68170 PF13298 DNA polymerase Ligase (LigD) AMIS_68170 PF04679 ATP dependent DNA ligase C terminal region AMIS_6820 PF02653 Branched-chain amino acid transport system / permease component AMIS_68200 PF01641 SelR domain AMIS_68220 PF00535 Glycosyl transferase family 2 AMIS_68230 PF00186 Dihydrofolate reductase AMIS_68240 PF00303 Thymidylate synthase AMIS_68250 PF03358 NADPH-dependent FMN reductase AMIS_68260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMIS_68260 PF02806 Alpha amylase, C-terminal all-beta domain AMIS_68260 PF00128 Alpha amylase, catalytic domain AMIS_68270 PF13673 Acetyltransferase (GNAT) domain AMIS_6830 PF00480 ROK family AMIS_68300 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMIS_68320 PF13180 PDZ domain AMIS_68330 PF01612 3'-5' exonuclease AMIS_68330 PF00570 HRDC domain AMIS_68340 PF02803 Thiolase, C-terminal domain AMIS_68340 PF00108 Thiolase, N-terminal domain AMIS_68350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIS_68350 PF00378 Enoyl-CoA hydratase/isomerase AMIS_68350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIS_68370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_68370 PF00512 His Kinase A (phospho-acceptor) domain AMIS_68370 PF00672 HAMP domain AMIS_68380 PF00072 Response regulator receiver domain AMIS_68380 PF00486 Transcriptional regulatory protein, C terminal AMIS_68420 PF02779 Transketolase, pyrimidine binding domain AMIS_68420 PF02780 Transketolase, C-terminal domain AMIS_68420 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMIS_68430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMIS_68430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMIS_68440 PF05958 tRNA (Uracil-5-)-methyltransferase AMIS_68440 PF01938 TRAM domain AMIS_68450 PF13520 Amino acid permease AMIS_68460 PF02080 TrkA-C domain AMIS_68460 PF02254 TrkA-N domain AMIS_68470 PF02254 TrkA-N domain AMIS_68470 PF02080 TrkA-C domain AMIS_68510 PF00692 dUTPase AMIS_68560 PF00459 Inositol monophosphatase family AMIS_68570 PF04539 Sigma-70 region 3 AMIS_68570 PF04542 Sigma-70 region 2 AMIS_68570 PF00140 Sigma-70 factor, region 1.2 AMIS_68570 PF04545 Sigma-70, region 4 AMIS_68590 PF04851 Type III restriction enzyme, res subunit AMIS_68600 PF03458 UPF0126 domain AMIS_68620 PF04227 Indigoidine synthase A like protein AMIS_68680 PF02743 Cache domain AMIS_68680 PF00672 HAMP domain AMIS_68680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_6870 PF00174 Oxidoreductase molybdopterin binding domain AMIS_68710 PF01584 CheW-like domain AMIS_68710 PF07194 P2 response regulator binding domain AMIS_68710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_68710 PF02895 Signal transducing histidine kinase, homodimeric domain AMIS_68710 PF01627 Hpt domain AMIS_68720 PF00072 Response regulator receiver domain AMIS_68730 PF03705 CheR methyltransferase, all-alpha domain AMIS_68730 PF01739 CheR methyltransferase, SAM binding domain AMIS_68750 PF01339 CheB methylesterase AMIS_68750 PF00072 Response regulator receiver domain AMIS_68760 PF01584 CheW-like domain AMIS_68770 PF17202 Single cache domain 3 AMIS_68770 PF00672 HAMP domain AMIS_68770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_68790 PF02580 D-Tyr-tRNA(Tyr) deacylase AMIS_6880 PF02467 Transcription factor WhiB AMIS_68820 PF04542 Sigma-70 region 2 AMIS_68820 PF00140 Sigma-70 factor, region 1.2 AMIS_68820 PF04539 Sigma-70 region 3 AMIS_68820 PF04545 Sigma-70, region 4 AMIS_68840 PF00850 Histone deacetylase domain AMIS_68850 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMIS_68850 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMIS_68850 PF18357 Diphteria toxin repressor SH3 domain AMIS_6890 PF00196 Bacterial regulatory proteins, luxR family AMIS_6890 PF00072 Response regulator receiver domain AMIS_68920 PF03477 ATP cone domain AMIS_68930 PF01726 LexA DNA binding domain AMIS_68930 PF00717 Peptidase S24-like AMIS_68950 PF16360 GTP-binding GTPase Middle Region AMIS_68950 PF13167 GTP-binding GTPase N-terminal AMIS_68950 PF01926 50S ribosome-binding GTPase AMIS_68960 PF03949 Malic enzyme, NAD binding domain AMIS_68960 PF00390 Malic enzyme, N-terminal domain AMIS_68970 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIS_68980 PF01678 Diaminopimelate epimerase AMIS_690 PF03006 Haemolysin-III related AMIS_6900 PF17252 Family of unknown function (DUF5319) AMIS_69000 PF03993 Domain of Unknown Function (DUF349) AMIS_69010 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_69020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_69030 PF00919 Uncharacterized protein family UPF0004 AMIS_69030 PF04055 Radical SAM superfamily AMIS_69050 PF00005 ABC transporter AMIS_69060 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMIS_69070 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_69080 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_69090 PF12072 Domain of unknown function (DUF3552) AMIS_69090 PF00013 KH domain AMIS_69090 PF01966 HD domain AMIS_6910 PF00571 CBS domain AMIS_6910 PF00478 IMP dehydrogenase / GMP reductase domain AMIS_69100 PF02631 RecX family AMIS_69110 PF00154 recA bacterial DNA recombination protein AMIS_69120 PF03167 Uracil DNA glycosylase superfamily AMIS_69130 PF00155 Aminotransferase class I and II AMIS_69130 PF00392 Bacterial regulatory proteins, gntR family AMIS_69150 PF01810 LysE type translocator AMIS_69160 PF03793 PASTA domain AMIS_69160 PF00069 Protein kinase domain AMIS_69170 PF00270 DEAD/DEAH box helicase AMIS_69170 PF08494 DEAD/H associated AMIS_69170 PF00271 Helicase conserved C-terminal domain AMIS_6920 PF00478 IMP dehydrogenase / GMP reductase domain AMIS_69210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIS_69210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIS_69250 PF18146 Damage-inducible protein CinA KH domain AMIS_69250 PF00994 Probable molybdopterin binding domain AMIS_69250 PF02464 Competence-damaged protein AMIS_69270 PF00919 Uncharacterized protein family UPF0004 AMIS_69270 PF04055 Radical SAM superfamily AMIS_69270 PF18693 TRAM domain AMIS_6930 PF01433 Peptidase family M1 domain AMIS_6930 PF11838 ERAP1-like C-terminal domain AMIS_69320 PF01580 FtsK/SpoIIIE family AMIS_69320 PF17854 FtsK alpha domain AMIS_69320 PF09397 Ftsk gamma domain AMIS_69340 PF02983 Alpha-lytic protease prodomain AMIS_69350 PF17770 Ribonuclease J C-terminal domain AMIS_69350 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMIS_69350 PF12706 Beta-lactamase superfamily domain AMIS_69360 PF00701 Dihydrodipicolinate synthetase family AMIS_69380 PF06224 Winged helix DNA-binding domain AMIS_6940 PF03816 Cell envelope-related transcriptional attenuator domain AMIS_6950 PF00082 Subtilase family AMIS_69510 PF05173 Dihydrodipicolinate reductase, C-terminus AMIS_69510 PF01113 Dihydrodipicolinate reductase, N-terminus AMIS_69530 PF05193 Peptidase M16 inactive domain AMIS_69530 PF00675 Insulinase (Peptidase family M16) AMIS_69540 PF01138 3' exoribonuclease family, domain 1 AMIS_69540 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMIS_69540 PF00575 S1 RNA binding domain AMIS_69540 PF00013 KH domain AMIS_69550 PF00312 Ribosomal protein S15 AMIS_69560 PF06574 FAD synthetase AMIS_69560 PF01687 Riboflavin kinase AMIS_69570 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMIS_69570 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMIS_69570 PF09142 tRNA Pseudouridine synthase II, C terminal AMIS_6960 PF00117 Glutamine amidotransferase class-I AMIS_6960 PF02540 NAD synthase AMIS_6960 PF00958 GMP synthase C terminal domain AMIS_69600 PF01368 DHH family AMIS_69600 PF02272 DHHA1 domain AMIS_69610 PF02033 Ribosome-binding factor A AMIS_69640 PF04760 Translation initiation factor IF-2, N-terminal region AMIS_69640 PF00009 Elongation factor Tu GTP binding domain AMIS_69640 PF11987 Translation-initiation factor 2 AMIS_69650 PF13184 NusA-like KH domain AMIS_69650 PF08529 NusA N-terminal domain AMIS_69660 PF02576 RimP N-terminal domain AMIS_69660 PF17384 RimP C-terminal SH3 domain AMIS_6970 PF00293 NUDIX domain AMIS_69710 PF00557 Metallopeptidase family M24 AMIS_69740 PF07722 Peptidase C26 AMIS_69750 PF07722 Peptidase C26 AMIS_69770 PF00171 Aldehyde dehydrogenase family AMIS_69780 PF00120 Glutamine synthetase, catalytic domain AMIS_6980 PF13344 Haloacid dehalogenase-like hydrolase AMIS_6980 PF00293 NUDIX domain AMIS_69810 PF07730 Histidine kinase AMIS_69810 PF13492 GAF domain AMIS_69810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_69820 PF00072 Response regulator receiver domain AMIS_69820 PF00196 Bacterial regulatory proteins, luxR family AMIS_69830 PF00005 ABC transporter AMIS_69830 PF13732 Domain of unknown function (DUF4162) AMIS_69850 PF08359 YsiA-like protein, C-terminal region AMIS_69850 PF00440 Bacterial regulatory proteins, tetR family AMIS_69870 PF00005 ABC transporter AMIS_6990 PF01066 CDP-alcohol phosphatidyltransferase AMIS_69920 PF13188 PAS domain AMIS_69920 PF00512 His Kinase A (phospho-acceptor) domain AMIS_69920 PF00072 Response regulator receiver domain AMIS_69920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_69920 PF08448 PAS fold AMIS_69950 PF04551 GcpE protein AMIS_69960 PF17820 PDZ domain AMIS_69960 PF02163 Peptidase family M50 AMIS_69970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMIS_69970 PF13288 DXP reductoisomerase C-terminal domain AMIS_69970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMIS_700 PF02682 Carboxyltransferase domain, subdomain C and D AMIS_7000 PF02666 Phosphatidylserine decarboxylase AMIS_70000 PF00355 Rieske [2Fe-2S] domain AMIS_70030 PF04055 Radical SAM superfamily AMIS_70050 PF01765 Ribosome recycling factor AMIS_70060 PF00696 Amino acid kinase family AMIS_70070 PF00889 Elongation factor TS AMIS_70080 PF00318 Ribosomal protein S2 AMIS_70100 PF02021 Uncharacterised protein family UPF0102 AMIS_70110 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMIS_70110 PF01078 Magnesium chelatase, subunit ChlI AMIS_70120 PF02481 DNA recombination-mediator protein A AMIS_70120 PF17782 DprA winged helix domain AMIS_70150 PF00589 Phage integrase family AMIS_70150 PF02899 Phage integrase, N-terminal SAM-like domain AMIS_70170 PF01551 Peptidase family M23 AMIS_70180 PF10611 Protein of unknown function (DUF2469) AMIS_70190 PF01351 Ribonuclease HII AMIS_70200 PF00293 NUDIX domain AMIS_70210 PF10502 Signal peptidase, peptidase S26 AMIS_70220 PF10502 Signal peptidase, peptidase S26 AMIS_70230 PF01245 Ribosomal protein L19 AMIS_70240 PF01746 tRNA (Guanine-1)-methyltransferase AMIS_70250 PF01782 RimM N-terminal domain AMIS_70250 PF05239 PRC-barrel domain AMIS_70270 PF00886 Ribosomal protein S16 AMIS_70290 PF03129 Anticodon binding domain AMIS_70290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIS_7030 PF07730 Histidine kinase AMIS_7030 PF13492 GAF domain AMIS_7030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_70340 PF01979 Amidohydrolase family AMIS_70360 PF02978 Signal peptide binding domain AMIS_70360 PF02881 SRP54-type protein, helical bundle domain AMIS_70360 PF00448 SRP54-type protein, GTPase domain AMIS_70380 PF17101 Stealth protein CR1, conserved region 1 AMIS_70380 PF11380 Stealth protein CR2, conserved region 2 AMIS_70380 PF17102 Stealth protein CR3, conserved region 3 AMIS_70380 PF17103 Stealth protein CR4, conserved region 4 AMIS_70390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMIS_70390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMIS_70390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMIS_7040 PF00196 Bacterial regulatory proteins, luxR family AMIS_7040 PF00072 Response regulator receiver domain AMIS_70410 PF00535 Glycosyl transferase family 2 AMIS_70450 PF00535 Glycosyl transferase family 2 AMIS_70460 PF01757 Acyltransferase family AMIS_70480 PF01501 Glycosyl transferase family 8 AMIS_70480 PF00535 Glycosyl transferase family 2 AMIS_70490 PF01966 HD domain AMIS_70490 PF08335 GlnD PII-uridylyltransferase AMIS_70490 PF01909 Nucleotidyltransferase domain AMIS_7050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIS_70500 PF00543 Nitrogen regulatory protein P-II AMIS_70510 PF00909 Ammonium Transporter Family AMIS_70530 PF02881 SRP54-type protein, helical bundle domain AMIS_70530 PF00448 SRP54-type protein, GTPase domain AMIS_70550 PF04978 Protein of unknown function (DUF664) AMIS_70590 PF06470 SMC proteins Flexible Hinge Domain AMIS_70590 PF02463 RecF/RecN/SMC N terminal domain AMIS_70640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIS_70640 PF06827 Zinc finger found in FPG and IleRS AMIS_70640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIS_70660 PF00035 Double-stranded RNA binding motif AMIS_70660 PF14622 Ribonuclease-III-like AMIS_70670 PF02504 Fatty acid synthesis protein AMIS_70680 PF01783 Ribosomal L32p protein family AMIS_70690 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMIS_7070 PF12911 N-terminal TM domain of oligopeptide transport permease C AMIS_7070 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_70710 PF01467 Cytidylyltransferase-like AMIS_70760 PF00271 Helicase conserved C-terminal domain AMIS_70760 PF00270 DEAD/DEAH box helicase AMIS_70760 PF17191 RecG wedge domain AMIS_70770 PF02734 DAK2 domain AMIS_70770 PF13684 Dihydroxyacetone kinase family AMIS_70780 PF00830 Ribosomal L28 family AMIS_70790 PF00583 Acetyltransferase (GNAT) family AMIS_7080 PF00005 ABC transporter AMIS_7080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_70800 PF02769 AIR synthase related protein, C-terminal domain AMIS_70800 PF00586 AIR synthase related protein, N-terminal domain AMIS_70830 PF07478 D-ala D-ala ligase C-terminus AMIS_70830 PF01820 D-ala D-ala ligase N-terminus AMIS_70860 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIS_70870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMIS_70870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMIS_70880 PF00501 AMP-binding enzyme AMIS_70880 PF01553 Acyltransferase AMIS_7090 PF00005 ABC transporter AMIS_7090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_70910 PF13089 Polyphosphate kinase N-terminal domain AMIS_70910 PF13090 Polyphosphate kinase C-terminal domain 2 AMIS_70910 PF02503 Polyphosphate kinase middle domain AMIS_70910 PF17941 Polyphosphate kinase C-terminal domain 1 AMIS_70920 PF00293 NUDIX domain AMIS_70920 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_70940 PF00216 Bacterial DNA-binding protein AMIS_70950 PF00694 Aconitase C-terminal domain AMIS_70960 PF00330 Aconitase family (aconitate hydratase) AMIS_710 PF02626 Carboxyltransferase domain, subdomain A and B AMIS_7100 PF01817 Chorismate mutase type II AMIS_71010 PF00753 Metallo-beta-lactamase superfamily AMIS_71030 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMIS_71040 PF01381 Helix-turn-helix AMIS_71060 PF00005 ABC transporter AMIS_71080 PF00472 RF-1 domain AMIS_71080 PF03462 PCRF domain AMIS_7110 PF00149 Calcineurin-like phosphoesterase AMIS_7110 PF00565 Staphylococcal nuclease homologue AMIS_7110 PF00746 LPXTG cell wall anchor motif AMIS_7110 PF02872 5'-nucleotidase, C-terminal domain AMIS_71120 PF13302 Acetyltransferase (GNAT) domain AMIS_71130 PF08502 LeuA allosteric (dimerisation) domain AMIS_71130 PF00682 HMGL-like AMIS_71160 PF01063 Amino-transferase class IV AMIS_71170 PF00180 Isocitrate/isopropylmalate dehydrogenase AMIS_71190 PF01842 ACT domain AMIS_71190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMIS_71190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMIS_7120 PF00580 UvrD/REP helicase N-terminal domain AMIS_7120 PF13361 UvrD-like helicase C-terminal domain AMIS_71200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMIS_71200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMIS_71210 PF10369 Small subunit of acetolactate synthase AMIS_71220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIS_71220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_71220 PF00205 Thiamine pyrophosphate enzyme, central domain AMIS_71230 PF13188 PAS domain AMIS_71230 PF03707 Bacterial signalling protein N terminal repeat AMIS_71230 PF00563 EAL domain AMIS_71230 PF00990 Diguanylate cyclase, GGDEF domain AMIS_71240 PF00920 Dehydratase family AMIS_71250 PF13344 Haloacid dehalogenase-like hydrolase AMIS_71250 PF00293 NUDIX domain AMIS_71260 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_71270 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_71290 PF00356 Bacterial regulatory proteins, lacI family AMIS_7130 PF01551 Peptidase family M23 AMIS_7130 PF01476 LysM domain AMIS_71300 PF00563 EAL domain AMIS_71300 PF03707 Bacterial signalling protein N terminal repeat AMIS_71300 PF00990 Diguanylate cyclase, GGDEF domain AMIS_71320 PF07995 Glucose / Sorbosone dehydrogenase AMIS_71340 PF03211 Pectate lyase AMIS_71350 PF02637 GatB domain AMIS_71350 PF02934 GatB/GatE catalytic domain AMIS_71360 PF01425 Amidase AMIS_71370 PF02686 Glu-tRNAGln amidotransferase C subunit AMIS_71380 PF00990 Diguanylate cyclase, GGDEF domain AMIS_71380 PF03707 Bacterial signalling protein N terminal repeat AMIS_71380 PF00563 EAL domain AMIS_71390 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMIS_71390 PF12826 Helix-hairpin-helix motif AMIS_71390 PF03120 NAD-dependent DNA ligase OB-fold domain AMIS_71390 PF00533 BRCA1 C Terminus (BRCT) domain AMIS_71390 PF01653 NAD-dependent DNA ligase adenylation domain AMIS_7140 PF08460 Bacterial SH3 domain AMIS_7140 PF01551 Peptidase family M23 AMIS_71420 PF00266 Aminotransferase class-V AMIS_71430 PF00766 Electron transfer flavoprotein FAD-binding domain AMIS_71430 PF01012 Electron transfer flavoprotein domain AMIS_71440 PF01012 Electron transfer flavoprotein domain AMIS_71450 PF02656 Domain of unknown function (DUF202) AMIS_71480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMIS_71480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_71480 PF00205 Thiamine pyrophosphate enzyme, central domain AMIS_71490 PF00012 Hsp70 protein AMIS_7150 PF02310 B12 binding domain AMIS_71500 PF00378 Enoyl-CoA hydratase/isomerase AMIS_71530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_71530 PF12729 Four helix bundle sensory module for signal transduction AMIS_71530 PF00672 HAMP domain AMIS_71540 PF08447 PAS fold AMIS_71540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMIS_71550 PF00294 pfkB family carbohydrate kinase AMIS_71560 PF00005 ABC transporter AMIS_71580 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_7160 PF00549 CoA-ligase AMIS_7160 PF08442 ATP-grasp domain AMIS_71600 PF05088 Bacterial NAD-glutamate dehydrogenase AMIS_71620 PF00491 Arginase family AMIS_71630 PF00085 Thioredoxin AMIS_71650 PF01494 FAD binding domain AMIS_71680 PF02803 Thiolase, C-terminal domain AMIS_71680 PF00108 Thiolase, N-terminal domain AMIS_7170 PF00549 CoA-ligase AMIS_7170 PF02629 CoA binding domain AMIS_71750 PF00171 Aldehyde dehydrogenase family AMIS_71760 PF00005 ABC transporter AMIS_71780 PF01939 Endonuclease NucS AMIS_71810 PF01580 FtsK/SpoIIIE family AMIS_71840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMIS_71840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMIS_71860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIS_71870 PF01923 Cobalamin adenosyltransferase AMIS_71880 PF02567 Phenazine biosynthesis-like protein AMIS_71900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMIS_71920 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIS_71920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIS_71930 PF00231 ATP synthase AMIS_71940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIS_71940 PF00306 ATP synthase alpha/beta chain, C terminal domain AMIS_71940 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIS_71950 PF00213 ATP synthase delta (OSCP) subunit AMIS_71960 PF00430 ATP synthase B/B' CF(0) AMIS_71970 PF00137 ATP synthase subunit C AMIS_71980 PF00119 ATP synthase A chain AMIS_720 PF03746 LamB/YcsF family AMIS_7200 PF00551 Formyl transferase AMIS_72010 PF00464 Serine hydroxymethyltransferase AMIS_72020 PF11066 Protein of unknown function (DUF2867) AMIS_72020 PF13460 NAD(P)H-binding AMIS_72030 PF03481 Putative GTP-binding controlling metal-binding AMIS_72030 PF01300 Telomere recombination AMIS_72040 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMIS_72050 PF01300 Telomere recombination AMIS_72060 PF05175 Methyltransferase small domain AMIS_72060 PF17827 PrmC N-terminal domain AMIS_72070 PF00990 Diguanylate cyclase, GGDEF domain AMIS_7210 PF01808 AICARFT/IMPCHase bienzyme AMIS_7210 PF02142 MGS-like domain AMIS_72100 PF03462 PCRF domain AMIS_72100 PF00472 RF-1 domain AMIS_72110 PF01197 Ribosomal protein L31 AMIS_72150 PF02898 Nitric oxide synthase, oxygenase domain AMIS_72160 PF07498 Rho termination factor, N-terminal domain AMIS_72160 PF07497 Rho termination factor, RNA-binding domain AMIS_72160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIS_72160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIS_72160 PF07498 Rho termination factor, N-terminal domain AMIS_72160 PF07497 Rho termination factor, RNA-binding domain AMIS_72170 PF00288 GHMP kinases N terminal domain AMIS_72190 PF00873 AcrB/AcrD/AcrF family AMIS_72230 PF05746 DALR anticodon binding domain AMIS_72230 PF00750 tRNA synthetases class I (R) AMIS_72230 PF03485 Arginyl tRNA synthetase N terminal domain AMIS_72240 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMIS_72240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMIS_72250 PF01842 ACT domain AMIS_72250 PF00742 Homoserine dehydrogenase AMIS_72250 PF03447 Homoserine dehydrogenase, NAD binding domain AMIS_72260 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_72270 PF01380 SIS domain AMIS_72280 PF01522 Polysaccharide deacetylase AMIS_72320 PF00069 Protein kinase domain AMIS_72350 PF00440 Bacterial regulatory proteins, tetR family AMIS_72350 PF16859 Tetracyclin repressor-like, C-terminal domain AMIS_72360 PF07690 Major Facilitator Superfamily AMIS_72370 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMIS_72390 PF12833 Helix-turn-helix domain AMIS_72390 PF14525 AraC-binding-like domain AMIS_7240 PF00180 Isocitrate/isopropylmalate dehydrogenase AMIS_72420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_72420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_72450 PF03738 Glutathionylspermidine synthase preATP-grasp AMIS_72480 PF00128 Alpha amylase, catalytic domain AMIS_72480 PF16657 Maltogenic Amylase, C-terminal domain AMIS_7250 PF00171 Aldehyde dehydrogenase family AMIS_7250 PF00465 Iron-containing alcohol dehydrogenase AMIS_72520 PF09335 SNARE associated Golgi protein AMIS_72540 PF00704 Glycosyl hydrolases family 18 AMIS_72540 PF00041 Fibronectin type III domain AMIS_72560 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIS_72570 PF01522 Polysaccharide deacetylase AMIS_72580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIS_72580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIS_72580 PF06827 Zinc finger found in FPG and IleRS AMIS_72590 PF00574 Clp protease AMIS_7260 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AMIS_7260 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AMIS_72620 PF00202 Aminotransferase class-III AMIS_72670 PF00376 MerR family regulatory protein AMIS_72670 PF09278 MerR, DNA binding AMIS_72680 PF00085 Thioredoxin AMIS_7270 PF08220 DeoR-like helix-turn-helix domain AMIS_7270 PF00455 DeoR C terminal sensor domain AMIS_72720 PF13180 PDZ domain AMIS_72730 PF00512 His Kinase A (phospho-acceptor) domain AMIS_72730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_72730 PF00672 HAMP domain AMIS_72740 PF00486 Transcriptional regulatory protein, C terminal AMIS_72740 PF00072 Response regulator receiver domain AMIS_72750 PF01553 Acyltransferase AMIS_72780 PF02779 Transketolase, pyrimidine binding domain AMIS_72780 PF16078 2-oxoglutarate dehydrogenase N-terminus AMIS_72780 PF00676 Dehydrogenase E1 component AMIS_72780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIS_72780 PF16870 2-oxoglutarate dehydrogenase C-terminal AMIS_72800 PF01515 Phosphate acetyl/butaryl transferase AMIS_72800 PF07085 DRTGG domain AMIS_72810 PF00871 Acetokinase family AMIS_72830 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_72830 PF00107 Zinc-binding dehydrogenase AMIS_72840 PF03949 Malic enzyme, NAD binding domain AMIS_72840 PF00390 Malic enzyme, N-terminal domain AMIS_72860 PF09055 Nickel-containing superoxide dismutase AMIS_72870 PF13581 Histidine kinase-like ATPase domain AMIS_72880 PF07702 UTRA domain AMIS_72880 PF00392 Bacterial regulatory proteins, gntR family AMIS_72900 PF00781 Diacylglycerol kinase catalytic domain AMIS_72910 PF02467 Transcription factor WhiB AMIS_72930 PF01507 Phosphoadenosine phosphosulfate reductase family AMIS_72950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMIS_72950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMIS_72970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_72970 PF07568 Histidine kinase AMIS_72970 PF12282 Signal transduction histidine kinase AMIS_72980 PF01380 SIS domain AMIS_730 PF02683 Cytochrome C biogenesis protein transmembrane region AMIS_730 PF00578 AhpC/TSA family AMIS_730 PF17991 Thioredoxin like C-terminal domain AMIS_7300 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMIS_73000 PF00364 Biotin-requiring enzyme AMIS_73010 PF13490 Putative zinc-finger AMIS_73020 PF04542 Sigma-70 region 2 AMIS_73020 PF08281 Sigma-70, region 4 AMIS_73050 PF02586 SOS response associated peptidase (SRAP) AMIS_73060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMIS_73070 PF03193 RsgA GTPase AMIS_73080 PF00459 Inositol monophosphatase family AMIS_73110 PF00704 Glycosyl hydrolases family 18 AMIS_73110 PF00041 Fibronectin type III domain AMIS_73120 PF00722 Glycosyl hydrolases family 16 AMIS_73130 PF01374 Glycosyl hydrolase family 46 AMIS_73150 PF02446 4-alpha-glucanotransferase AMIS_73210 PF03741 Integral membrane protein TerC family AMIS_73220 PF00805 Pentapeptide repeats (8 copies) AMIS_73240 PF03699 Uncharacterised protein family (UPF0182) AMIS_73250 PF13180 PDZ domain AMIS_73250 PF05362 Lon protease (S16) C-terminal proteolytic domain AMIS_73310 PF03109 ABC1 family AMIS_73320 PF02467 Transcription factor WhiB AMIS_73340 PF00580 UvrD/REP helicase N-terminal domain AMIS_73340 PF13361 UvrD-like helicase C-terminal domain AMIS_73340 PF00570 HRDC domain AMIS_73350 PF00462 Glutaredoxin AMIS_73370 PF09297 NADH pyrophosphatase zinc ribbon domain AMIS_73370 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMIS_73370 PF00293 NUDIX domain AMIS_73400 PF02082 Transcriptional regulator AMIS_73410 PF09084 NMT1/THI5 like AMIS_73420 PF00005 ABC transporter AMIS_73430 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_73460 PF00313 'Cold-shock' DNA-binding domain AMIS_73480 PF13361 UvrD-like helicase C-terminal domain AMIS_73480 PF00580 UvrD/REP helicase N-terminal domain AMIS_73490 PF00580 UvrD/REP helicase N-terminal domain AMIS_73490 PF13361 UvrD-like helicase C-terminal domain AMIS_73490 PF12705 PD-(D/E)XK nuclease superfamily AMIS_73510 PF03641 Possible lysine decarboxylase AMIS_73520 PF03641 Possible lysine decarboxylase AMIS_73540 PF01546 Peptidase family M20/M25/M40 AMIS_73540 PF07687 Peptidase dimerisation domain AMIS_73550 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AMIS_73550 PF14602 Hexapeptide repeat of succinyl-transferase AMIS_73580 PF09278 MerR, DNA binding AMIS_73580 PF00376 MerR family regulatory protein AMIS_73610 PF00106 short chain dehydrogenase AMIS_73610 PF00561 alpha/beta hydrolase fold AMIS_73640 PF00155 Aminotransferase class I and II AMIS_73650 PF00037 4Fe-4S binding domain AMIS_73660 PF00583 Acetyltransferase (GNAT) family AMIS_73690 PF02585 GlcNAc-PI de-N-acetylase AMIS_73700 PF00326 Prolyl oligopeptidase family AMIS_73700 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMIS_73720 PF01523 Putative modulator of DNA gyrase AMIS_73750 PF02910 Fumarate reductase flavoprotein C-term AMIS_73750 PF00890 FAD binding domain AMIS_73760 PF13183 4Fe-4S dicluster domain AMIS_73760 PF13085 2Fe-2S iron-sulfur cluster binding domain AMIS_73780 PF00005 ABC transporter AMIS_73780 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMIS_73790 PF00005 ABC transporter AMIS_7380 PF02706 Chain length determinant protein AMIS_7380 PF13807 G-rich domain on putative tyrosine kinase AMIS_7380 PF13614 AAA domain AMIS_73810 PF02653 Branched-chain amino acid transport system / permease component AMIS_73810 PF11862 Domain of unknown function (DUF3382) AMIS_73860 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_73860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_73860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_73880 PF01850 PIN domain AMIS_73890 PF01402 Ribbon-helix-helix protein, copG family AMIS_73910 PF00392 Bacterial regulatory proteins, gntR family AMIS_73910 PF07702 UTRA domain AMIS_73920 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_73920 PF00107 Zinc-binding dehydrogenase AMIS_73930 PF00171 Aldehyde dehydrogenase family AMIS_73940 PF02909 Tetracyclin repressor-like, C-terminal domain AMIS_73940 PF00440 Bacterial regulatory proteins, tetR family AMIS_73950 PF13193 AMP-binding enzyme C-terminal domain AMIS_73950 PF00501 AMP-binding enzyme AMIS_73960 PF00293 NUDIX domain AMIS_7410 PF13732 Domain of unknown function (DUF4162) AMIS_7410 PF00005 ABC transporter AMIS_74150 PF01926 50S ribosome-binding GTPase AMIS_74150 PF06071 Protein of unknown function (DUF933) AMIS_74170 PF02805 Metal binding domain of Ada AMIS_74170 PF06029 AlkA N-terminal domain AMIS_74170 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIS_74170 PF12833 Helix-turn-helix domain AMIS_74180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMIS_74180 PF02805 Metal binding domain of Ada AMIS_74180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMIS_74180 PF12833 Helix-turn-helix domain AMIS_74190 PF00133 tRNA synthetases class I (I, L, M and V) AMIS_74190 PF08264 Anticodon-binding domain of tRNA AMIS_74220 PF02646 RmuC family AMIS_74230 PF02401 LytB protein AMIS_74260 PF02601 Exonuclease VII, large subunit AMIS_74260 PF13742 OB-fold nucleic acid binding domain AMIS_74270 PF02609 Exonuclease VII small subunit AMIS_74290 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMIS_7430 PF00005 ABC transporter AMIS_74300 PF01694 Rhomboid family AMIS_74310 PF00089 Trypsin AMIS_74330 PF02562 PhoH-like protein AMIS_74330 PF13638 PIN domain AMIS_74340 PF02358 Trehalose-phosphatase AMIS_74350 PF01255 Putative undecaprenyl diphosphate synthase AMIS_74360 PF01494 FAD binding domain AMIS_74370 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AMIS_74370 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AMIS_74420 PF08279 HTH domain AMIS_74420 PF03099 Biotin/lipoate A/B protein ligase family AMIS_74420 PF02237 Biotin protein ligase C terminal domain AMIS_74440 PF01039 Carboxyl transferase domain AMIS_74470 PF00069 Protein kinase domain AMIS_74470 PF03793 PASTA domain AMIS_74510 PF02545 Maf-like protein AMIS_74520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIS_74520 PF02785 Biotin carboxylase C-terminal domain AMIS_74520 PF00289 Biotin carboxylase, N-terminal domain AMIS_74520 PF00364 Biotin-requiring enzyme AMIS_74540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMIS_74540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMIS_7460 PF00311 Phosphoenolpyruvate carboxylase AMIS_74610 PF01546 Peptidase family M20/M25/M40 AMIS_74610 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMIS_74620 PF02310 B12 binding domain AMIS_74620 PF01642 Methylmalonyl-CoA mutase AMIS_74630 PF03793 PASTA domain AMIS_74630 PF00069 Protein kinase domain AMIS_74640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIS_74640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIS_74640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIS_74640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIS_74660 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AMIS_74670 PF00293 NUDIX domain AMIS_74690 PF01791 DeoC/LacD family aldolase AMIS_7470 PF01341 Glycosyl hydrolases family 6 AMIS_7470 PF00553 Cellulose binding domain AMIS_74700 PF00171 Aldehyde dehydrogenase family AMIS_74710 PF00171 Aldehyde dehydrogenase family AMIS_74760 PF03259 Roadblock/LC7 domain AMIS_74780 PF00962 Adenosine/AMP deaminase AMIS_74810 PF02885 Glycosyl transferase family, helical bundle domain AMIS_74810 PF00591 Glycosyl transferase family, a/b domain AMIS_74810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMIS_74820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMIS_74860 PF02608 ABC transporter substrate-binding protein PnrA-like AMIS_74910 PF00579 tRNA synthetases class I (W and Y) AMIS_74920 PF01370 NAD dependent epimerase/dehydratase family AMIS_74930 PF10509 Galactokinase galactose-binding signature AMIS_74930 PF08544 GHMP kinases C terminal AMIS_74930 PF00288 GHMP kinases N terminal domain AMIS_74960 PF00009 Elongation factor Tu GTP binding domain AMIS_74970 PF01507 Phosphoadenosine phosphosulfate reductase family AMIS_74980 PF00459 Inositol monophosphatase family AMIS_74990 PF02397 Bacterial sugar transferase AMIS_7500 PF02911 Formyl transferase, C-terminal domain AMIS_7500 PF00551 Formyl transferase AMIS_75000 PF01195 Peptidyl-tRNA hydrolase AMIS_75010 PF01386 Ribosomal L25p family AMIS_75010 PF14693 Ribosomal protein TL5, C-terminal domain AMIS_75020 PF14572 Phosphoribosyl synthetase-associated domain AMIS_75020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMIS_75030 PF00483 Nucleotidyl transferase AMIS_75030 PF00132 Bacterial transferase hexapeptide (six repeats) AMIS_75050 PF00440 Bacterial regulatory proteins, tetR family AMIS_75050 PF16295 Tetracyclin repressor-like, C-terminal domain AMIS_75070 PF12848 ABC transporter AMIS_75070 PF16326 ABC transporter C-terminal domain AMIS_75070 PF00005 ABC transporter AMIS_75080 PF08544 GHMP kinases C terminal AMIS_75080 PF00288 GHMP kinases N terminal domain AMIS_7510 PF00270 DEAD/DEAH box helicase AMIS_7510 PF17757 UvrB interaction domain AMIS_7510 PF03461 TRCF domain AMIS_7510 PF00271 Helicase conserved C-terminal domain AMIS_7510 PF02559 CarD-like/TRCF domain AMIS_75100 PF00398 Ribosomal RNA adenine dimethylase AMIS_75120 PF01026 TatD related DNase AMIS_75150 PF09334 tRNA synthetases class I (M) AMIS_75170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIS_75180 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase AMIS_75180 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AMIS_75230 PF01522 Polysaccharide deacetylase AMIS_7530 PF03819 MazG nucleotide pyrophosphohydrolase domain AMIS_75300 PF03453 MoeA N-terminal region (domain I and II) AMIS_75300 PF00994 Probable molybdopterin binding domain AMIS_75300 PF03454 MoeA C-terminal region (domain IV) AMIS_75310 PF00483 Nucleotidyl transferase AMIS_75320 PF00990 Diguanylate cyclase, GGDEF domain AMIS_75320 PF00072 Response regulator receiver domain AMIS_75330 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMIS_75410 PF01914 MarC family integral membrane protein AMIS_75420 PF02811 PHP domain AMIS_75470 PF00085 Thioredoxin AMIS_75480 PF04055 Radical SAM superfamily AMIS_75480 PF04055 Radical SAM superfamily AMIS_75500 PF00106 short chain dehydrogenase AMIS_75530 PF13419 Haloacid dehalogenase-like hydrolase AMIS_75550 PF02567 Phenazine biosynthesis-like protein AMIS_75560 PF03448 MgtE intracellular N domain AMIS_75560 PF01769 Divalent cation transporter AMIS_75560 PF00571 CBS domain AMIS_75580 PF01883 Iron-sulfur cluster assembly protein AMIS_75580 PF10609 NUBPL iron-transfer P-loop NTPase AMIS_75590 PF02416 mttA/Hcf106 family AMIS_75600 PF13180 PDZ domain AMIS_75610 PF01596 O-methyltransferase AMIS_75620 PF02789 Cytosol aminopeptidase family, N-terminal domain AMIS_75620 PF00883 Cytosol aminopeptidase family, catalytic domain AMIS_75650 PF00378 Enoyl-CoA hydratase/isomerase AMIS_75670 PF00117 Glutamine amidotransferase class-I AMIS_75670 PF03352 Methyladenine glycosylase AMIS_75670 PF13302 Acetyltransferase (GNAT) domain AMIS_75670 PF13673 Acetyltransferase (GNAT) domain AMIS_75670 PF00958 GMP synthase C terminal domain AMIS_7570 PF03952 Enolase, N-terminal domain AMIS_7570 PF00113 Enolase, C-terminal TIM barrel domain AMIS_75700 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMIS_75710 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMIS_75710 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMIS_75710 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMIS_75720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMIS_75730 PF07885 Ion channel AMIS_75730 PF02254 TrkA-N domain AMIS_75750 PF00196 Bacterial regulatory proteins, luxR family AMIS_75790 PF00490 Delta-aminolevulinic acid dehydratase AMIS_75800 PF10414 Sirohaem synthase dimerisation region AMIS_75800 PF14824 Sirohaem biosynthesis protein central AMIS_75800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMIS_75810 PF03900 Porphobilinogen deaminase, C-terminal domain AMIS_75810 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMIS_75820 PF01488 Shikimate / quinate 5-dehydrogenase AMIS_75820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMIS_75820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMIS_75830 PF06971 Putative DNA-binding protein N-terminus AMIS_75830 PF02629 CoA binding domain AMIS_75850 PF05768 Glutaredoxin-like domain (DUF836) AMIS_75860 PF13193 AMP-binding enzyme C-terminal domain AMIS_75860 PF00501 AMP-binding enzyme AMIS_75870 PF04542 Sigma-70 region 2 AMIS_75870 PF08281 Sigma-70, region 4 AMIS_75890 PF01553 Acyltransferase AMIS_75900 PF01370 NAD dependent epimerase/dehydratase family AMIS_75910 PF08213 Mitochondrial domain of unknown function (DUF1713) AMIS_75920 PF12728 Helix-turn-helix domain AMIS_75930 PF01619 Proline dehydrogenase AMIS_75950 PF01261 Xylose isomerase-like TIM barrel AMIS_75980 PF00072 Response regulator receiver domain AMIS_75980 PF00486 Transcriptional regulatory protein, C terminal AMIS_75990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_75990 PF00512 His Kinase A (phospho-acceptor) domain AMIS_760 PF02817 e3 binding domain AMIS_760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMIS_760 PF00364 Biotin-requiring enzyme AMIS_7600 PF00583 Acetyltransferase (GNAT) family AMIS_76000 PF01895 PhoU domain AMIS_76010 PF00300 Histidine phosphatase superfamily (branch 1) AMIS_76030 PF10722 Putative bacterial sensory transduction regulator AMIS_76040 PF13439 Glycosyltransferase Family 4 AMIS_76040 PF00534 Glycosyl transferases group 1 AMIS_76050 PF00106 short chain dehydrogenase AMIS_76070 PF00072 Response regulator receiver domain AMIS_76070 PF00486 Transcriptional regulatory protein, C terminal AMIS_76080 PF00082 Subtilase family AMIS_76080 PF05922 Peptidase inhibitor I9 AMIS_7610 PF02541 Ppx/GppA phosphatase family AMIS_76100 PF00989 PAS fold AMIS_76100 PF00512 His Kinase A (phospho-acceptor) domain AMIS_76100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_76100 PF18698 Histidine kinase sensor domain AMIS_76100 PF00672 HAMP domain AMIS_76110 PF03364 Polyketide cyclase / dehydrase and lipid transport AMIS_76130 PF01551 Peptidase family M23 AMIS_76130 PF04225 Opacity-associated protein A LysM-like domain AMIS_76140 PF02599 Global regulator protein family AMIS_76150 PF02623 FliW protein AMIS_76170 PF00460 Flagella basal body rod protein AMIS_76170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIS_76190 PF00700 Bacterial flagellin C-terminal helical region AMIS_76190 PF00669 Bacterial flagellin N-terminal helical region AMIS_76230 PF00460 Flagella basal body rod protein AMIS_76240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIS_76240 PF00460 Flagella basal body rod protein AMIS_76250 PF02049 Flagellar hook-basal body complex protein FliE AMIS_76260 PF01514 Secretory protein of YscJ/FliF family AMIS_76260 PF08345 Flagellar M-ring protein C-terminal AMIS_76270 PF14841 FliG middle domain AMIS_76270 PF01706 FliG C-terminal domain AMIS_76270 PF14842 FliG N-terminal domain AMIS_76290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMIS_76290 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMIS_76290 PF18269 T3SS EscN ATPase C-terminal domain AMIS_76310 PF01464 Transglycosylase SLT domain AMIS_76310 PF10145 Phage-related minor tail protein AMIS_76310 PF01551 Peptidase family M23 AMIS_76350 PF00771 FHIPEP family AMIS_76360 PF01312 FlhB HrpN YscU SpaS Family AMIS_76370 PF01311 Bacterial export proteins, family 1 AMIS_76380 PF00813 FliP family AMIS_76400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMIS_76400 PF04509 CheC-like family AMIS_76430 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMIS_76430 PF00691 OmpA family AMIS_76440 PF01618 MotA/TolQ/ExbB proton channel family AMIS_76460 PF00460 Flagella basal body rod protein AMIS_76460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMIS_76460 PF07559 Flagellar basal body protein FlaE AMIS_76470 PF13860 FlgD Ig-like domain AMIS_76470 PF13861 FlgD Tudor-like domain AMIS_76470 PF03963 Flagellar hook capping protein - N-terminal region AMIS_76490 PF00072 Response regulator receiver domain AMIS_7650 PF03167 Uracil DNA glycosylase superfamily AMIS_76520 PF01739 CheR methyltransferase, SAM binding domain AMIS_76520 PF03705 CheR methyltransferase, all-alpha domain AMIS_76530 PF00072 Response regulator receiver domain AMIS_76530 PF01339 CheB methylesterase AMIS_76560 PF01627 Hpt domain AMIS_76560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_76560 PF02895 Signal transducing histidine kinase, homodimeric domain AMIS_76560 PF01584 CheW-like domain AMIS_76570 PF02895 Signal transducing histidine kinase, homodimeric domain AMIS_76570 PF01584 CheW-like domain AMIS_76570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_76570 PF09078 CheY binding AMIS_76570 PF01627 Hpt domain AMIS_76580 PF00072 Response regulator receiver domain AMIS_76580 PF00486 Transcriptional regulatory protein, C terminal AMIS_76590 PF00188 Cysteine-rich secretory protein family AMIS_76600 PF01565 FAD binding domain AMIS_76600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMIS_76620 PF00232 Glycosyl hydrolase family 1 AMIS_76630 PF00356 Bacterial regulatory proteins, lacI family AMIS_76690 PF01381 Helix-turn-helix AMIS_76710 PF05853 beta-keto acid cleavage enzyme AMIS_76730 PF01475 Ferric uptake regulator family AMIS_76750 PF08768 Domain of unknown function (DUF1794) AMIS_76780 PF00293 NUDIX domain AMIS_76790 PF13307 Helicase C-terminal domain AMIS_7680 PF07726 ATPase family associated with various cellular activities (AAA) AMIS_7680 PF17863 AAA lid domain AMIS_76810 PF08281 Sigma-70, region 4 AMIS_76810 PF04542 Sigma-70 region 2 AMIS_76810 PF12680 SnoaL-like domain AMIS_76840 PF01384 Phosphate transporter family AMIS_76850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_76850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_76880 PF00005 ABC transporter AMIS_76890 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_76900 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_76910 PF12849 PBP superfamily domain AMIS_76920 PF00583 Acetyltransferase (GNAT) family AMIS_76930 PF00486 Transcriptional regulatory protein, C terminal AMIS_76960 PF00581 Rhodanese-like domain AMIS_76970 PF07210 Protein of unknown function (DUF1416) AMIS_76980 PF01594 AI-2E family transporter AMIS_770 PF02779 Transketolase, pyrimidine binding domain AMIS_770 PF02780 Transketolase, C-terminal domain AMIS_77000 PF13367 PrsW family intramembrane metalloprotease AMIS_77040 PF01266 FAD dependent oxidoreductase AMIS_77040 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMIS_77060 PF00118 TCP-1/cpn60 chaperonin family AMIS_77090 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_77110 PF00005 ABC transporter AMIS_77130 PF17862 AAA+ lid domain AMIS_77130 PF01434 Peptidase family M41 AMIS_77130 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_77160 PF00005 ABC transporter AMIS_77170 PF08220 DeoR-like helix-turn-helix domain AMIS_77170 PF00455 DeoR C terminal sensor domain AMIS_77190 PF00480 ROK family AMIS_77190 PF01047 MarR family AMIS_77200 PF01979 Amidohydrolase family AMIS_77290 PF00005 ABC transporter AMIS_77290 PF17912 MalK OB fold domain AMIS_77310 PF00313 'Cold-shock' DNA-binding domain AMIS_77330 PF00588 SpoU rRNA Methylase family AMIS_77330 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMIS_77340 PF01406 tRNA synthetases class I (C) catalytic domain AMIS_77340 PF09190 DALR domain AMIS_77350 PF00082 Subtilase family AMIS_77360 PF00206 Lyase AMIS_77360 PF10415 Fumarase C C-terminus AMIS_77390 PF05683 Fumarase C-terminus AMIS_77390 PF05681 Fumarate hydratase (Fumerase) AMIS_77430 PF00155 Aminotransferase class I and II AMIS_77450 PF00480 ROK family AMIS_77450 PF01047 MarR family AMIS_7750 PF00108 Thiolase, N-terminal domain AMIS_7750 PF02803 Thiolase, C-terminal domain AMIS_77510 PF02542 YgbB family AMIS_77520 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMIS_77530 PF02559 CarD-like/TRCF domain AMIS_77560 PF02797 Chalcone and stilbene synthases, C-terminal domain AMIS_77560 PF00195 Chalcone and stilbene synthases, N-terminal domain AMIS_77570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_77570 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMIS_77570 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_77610 PF18073 Rubredoxin metal binding domain AMIS_77610 PF06745 KaiC AMIS_77620 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMIS_77620 PF12826 Helix-hairpin-helix motif AMIS_77620 PF10635 DisA bacterial checkpoint controller linker region AMIS_77670 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIS_77670 PF00633 Helix-hairpin-helix motif AMIS_77690 PF07724 AAA domain (Cdc48 subfamily) AMIS_77690 PF17871 AAA lid domain AMIS_77690 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_77690 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_77690 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_77700 PF11774 Lsr2 AMIS_77710 PF01336 OB-fold nucleic acid binding domain AMIS_77710 PF00152 tRNA synthetases class II (D, K and N) AMIS_77720 PF03309 Type III pantothenate kinase AMIS_77730 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMIS_77730 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMIS_77740 PF02910 Fumarate reductase flavoprotein C-term AMIS_77740 PF00890 FAD binding domain AMIS_77760 PF02261 Aspartate decarboxylase AMIS_77770 PF02569 Pantoate-beta-alanine ligase AMIS_7780 PF06803 Protein of unknown function (DUF1232) AMIS_77800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMIS_77860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMIS_77870 PF02152 Dihydroneopterin aldolase AMIS_77880 PF00809 Pterin binding enzyme AMIS_7790 PF00571 CBS domain AMIS_7790 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_77940 PF01464 Transglycosylase SLT domain AMIS_77940 PF10145 Phage-related minor tail protein AMIS_77940 PF01551 Peptidase family M23 AMIS_780 PF00676 Dehydrogenase E1 component AMIS_78000 PF01580 FtsK/SpoIIIE family AMIS_78030 PF01227 GTP cyclohydrolase I AMIS_78040 PF17862 AAA+ lid domain AMIS_78040 PF01434 Peptidase family M41 AMIS_78040 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_78060 PF01171 PP-loop family AMIS_78060 PF09179 TilS substrate binding domain AMIS_78080 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AMIS_78090 PF00719 Inorganic pyrophosphatase AMIS_78100 PF08817 WXG100 protein secretion system (Wss), protein YukD AMIS_78110 PF01580 FtsK/SpoIIIE family AMIS_78120 PF00082 Subtilase family AMIS_78130 PF02674 Colicin V production protein AMIS_78140 PF00293 NUDIX domain AMIS_78150 PF08534 Redoxin AMIS_78160 PF10576 Iron-sulfur binding domain of endonuclease III AMIS_78160 PF00730 HhH-GPD superfamily base excision DNA repair protein AMIS_78170 PF09587 Bacterial capsule synthesis protein PGA_cap AMIS_78180 PF00027 Cyclic nucleotide-binding domain AMIS_78180 PF13545 Crp-like helix-turn-helix domain AMIS_78200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMIS_78200 PF02785 Biotin carboxylase C-terminal domain AMIS_78200 PF00289 Biotin carboxylase, N-terminal domain AMIS_78200 PF00364 Biotin-requiring enzyme AMIS_78210 PF13191 AAA ATPase domain AMIS_78210 PF00069 Protein kinase domain AMIS_78220 PF00211 Adenylate and Guanylate cyclase catalytic domain AMIS_78220 PF00072 Response regulator receiver domain AMIS_78230 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMIS_78230 PF00753 Metallo-beta-lactamase superfamily AMIS_78270 PF02374 Anion-transporting ATPase AMIS_78280 PF02374 Anion-transporting ATPase AMIS_78280 PF17886 HSP20-like domain found in ArsA AMIS_78290 PF02467 Transcription factor WhiB AMIS_78300 PF00912 Transglycosylase AMIS_78300 PF00905 Penicillin binding protein transpeptidase domain AMIS_78300 PF17092 Penicillin-binding protein OB-like domain AMIS_78310 PF09424 Yqey-like protein AMIS_78320 PF00149 Calcineurin-like phosphoesterase AMIS_78340 PF00156 Phosphoribosyl transferase domain AMIS_78360 PF03091 CutA1 divalent ion tolerance protein AMIS_78370 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMIS_78370 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMIS_78380 PF13840 ACT domain AMIS_78380 PF01842 ACT domain AMIS_78380 PF00696 Amino acid kinase family AMIS_7840 PF00753 Metallo-beta-lactamase superfamily AMIS_7840 PF12706 Beta-lactamase superfamily domain AMIS_78400 PF08502 LeuA allosteric (dimerisation) domain AMIS_78400 PF00682 HMGL-like AMIS_78450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_78450 PF00005 ABC transporter AMIS_78460 PF00005 ABC transporter AMIS_78460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMIS_78470 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_78480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMIS_7850 PF03976 Polyphosphate kinase 2 (PPK2) AMIS_78500 PF00633 Helix-hairpin-helix motif AMIS_78500 PF02132 RecR protein AMIS_78500 PF13662 Toprim domain AMIS_78510 PF02575 YbaB/EbfC DNA-binding family AMIS_78520 PF12169 DNA polymerase III subunits gamma and tau domain III AMIS_78590 PF01048 Phosphorylase superfamily AMIS_7860 PF05235 CHAD domain AMIS_7860 PF01928 CYTH domain AMIS_78600 PF14437 MafB19-like deaminase AMIS_78640 PF02153 Prephenate dehydrogenase AMIS_78650 PF04978 Protein of unknown function (DUF664) AMIS_78660 PF01008 Initiation factor 2 subunit family AMIS_78660 PF00596 Class II Aldolase and Adducin N-terminal domain AMIS_78670 PF14791 DNA polymerase beta thumb AMIS_78670 PF02811 PHP domain AMIS_78670 PF14716 Helix-hairpin-helix domain AMIS_78700 PF00512 His Kinase A (phospho-acceptor) domain AMIS_78700 PF08521 Two-component sensor kinase N-terminal AMIS_78700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_78710 PF03259 Roadblock/LC7 domain AMIS_78750 PF02350 UDP-N-acetylglucosamine 2-epimerase AMIS_78790 PF01738 Dienelactone hydrolase family AMIS_78800 PF00440 Bacterial regulatory proteins, tetR family AMIS_78830 PF07690 Major Facilitator Superfamily AMIS_78840 PF00990 Diguanylate cyclase, GGDEF domain AMIS_78840 PF17158 Membrane-associated sensor, integral membrane domain AMIS_7890 PF01625 Peptide methionine sulfoxide reductase AMIS_78930 PF00881 Nitroreductase family AMIS_78940 PF01259 SAICAR synthetase AMIS_79000 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AMIS_79020 PF00072 Response regulator receiver domain AMIS_79020 PF00486 Transcriptional regulatory protein, C terminal AMIS_79040 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMIS_79040 PF01447 Thermolysin metallopeptidase, catalytic domain AMIS_79040 PF04389 Peptidase family M28 AMIS_79050 PF02632 BioY family AMIS_79070 PF13302 Acetyltransferase (GNAT) domain AMIS_79110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMIS_79110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMIS_79130 PF00248 Aldo/keto reductase family AMIS_79160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMIS_79160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMIS_79170 PF01212 Beta-eliminating lyase AMIS_79180 PF13569 Domain of unknown function (DUF4132) AMIS_79190 PF01126 Heme oxygenase AMIS_79230 PF01497 Periplasmic binding protein AMIS_79240 PF01032 FecCD transport family AMIS_79250 PF00005 ABC transporter AMIS_79280 PF03707 Bacterial signalling protein N terminal repeat AMIS_79280 PF00563 EAL domain AMIS_79280 PF00990 Diguanylate cyclase, GGDEF domain AMIS_79290 PF05199 GMC oxidoreductase AMIS_79320 PF07732 Multicopper oxidase AMIS_79320 PF07731 Multicopper oxidase AMIS_79320 PF00394 Multicopper oxidase AMIS_79420 PF00106 short chain dehydrogenase AMIS_79450 PF00072 Response regulator receiver domain AMIS_79450 PF00486 Transcriptional regulatory protein, C terminal AMIS_79460 PF00512 His Kinase A (phospho-acceptor) domain AMIS_79460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_79460 PF00672 HAMP domain AMIS_79490 PF12704 MacB-like periplasmic core domain AMIS_79490 PF00005 ABC transporter AMIS_79490 PF02687 FtsX-like permease family AMIS_79500 PF00005 ABC transporter AMIS_79500 PF02687 FtsX-like permease family AMIS_79500 PF12704 MacB-like periplasmic core domain AMIS_79520 PF00005 ABC transporter AMIS_79540 PF07730 Histidine kinase AMIS_79540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_79550 PF00072 Response regulator receiver domain AMIS_79550 PF00196 Bacterial regulatory proteins, luxR family AMIS_79560 PF03551 Transcriptional regulator PadR-like family AMIS_79600 PF00005 ABC transporter AMIS_79620 PF00196 Bacterial regulatory proteins, luxR family AMIS_79620 PF00072 Response regulator receiver domain AMIS_79630 PF12697 Alpha/beta hydrolase family AMIS_79650 PF00931 NB-ARC domain AMIS_79650 PF03704 Bacterial transcriptional activator domain AMIS_79650 PF00486 Transcriptional regulatory protein, C terminal AMIS_79690 PF06445 GyrI-like small molecule binding domain AMIS_79690 PF13411 MerR HTH family regulatory protein AMIS_7970 PF01625 Peptide methionine sulfoxide reductase AMIS_79700 PF00072 Response regulator receiver domain AMIS_79700 PF00196 Bacterial regulatory proteins, luxR family AMIS_79710 PF07730 Histidine kinase AMIS_79710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_79760 PF07730 Histidine kinase AMIS_79770 PF00072 Response regulator receiver domain AMIS_79770 PF00196 Bacterial regulatory proteins, luxR family AMIS_7980 PF01230 HIT domain AMIS_79800 PF13382 Adenine deaminase C-terminal domain AMIS_79800 PF01979 Amidohydrolase family AMIS_79820 PF07690 Major Facilitator Superfamily AMIS_79860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_79860 PF03466 LysR substrate binding domain AMIS_7990 PF01053 Cys/Met metabolism PLP-dependent enzyme AMIS_79910 PF07859 alpha/beta hydrolase fold AMIS_79920 PF13026 Protein of unknown function (DUF3887) AMIS_79920 PF12146 Serine aminopeptidase, S33 AMIS_79930 PF00144 Beta-lactamase AMIS_79960 PF00970 Oxidoreductase FAD-binding domain AMIS_79960 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_79960 PF00175 Oxidoreductase NAD-binding domain AMIS_79970 PF01327 Polypeptide deformylase AMIS_80 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_80 PF00204 DNA gyrase B AMIS_80 PF01751 Toprim domain AMIS_80 PF00986 DNA gyrase B subunit, carboxyl terminus AMIS_8000 PF01425 Amidase AMIS_80010 PF01161 Phosphatidylethanolamine-binding protein AMIS_80040 PF08659 KR domain AMIS_80040 PF00550 Phosphopantetheine attachment site AMIS_80040 PF14765 Polyketide synthase dehydratase AMIS_80040 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_80040 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_80040 PF00107 Zinc-binding dehydrogenase AMIS_80040 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_80040 PF00698 Acyl transferase domain AMIS_80040 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_80050 PF00376 MerR family regulatory protein AMIS_80050 PF09278 MerR, DNA binding AMIS_80060 PF00456 Transketolase, thiamine diphosphate binding domain AMIS_80070 PF02779 Transketolase, pyrimidine binding domain AMIS_8010 PF13291 ACT domain AMIS_8010 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_80100 PF01694 Rhomboid family AMIS_80110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMIS_80130 PF05108 Type VII secretion system ESX-1, transport TM domain B AMIS_80140 PF01544 CorA-like Mg2+ transporter protein AMIS_80150 PF00155 Aminotransferase class I and II AMIS_80150 PF00392 Bacterial regulatory proteins, gntR family AMIS_80160 PF00483 Nucleotidyl transferase AMIS_80170 PF00465 Iron-containing alcohol dehydrogenase AMIS_8020 PF03449 Transcription elongation factor, N-terminal AMIS_8020 PF01272 Transcription elongation factor, GreA/GreB, C-term AMIS_80210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMIS_80210 PF06827 Zinc finger found in FPG and IleRS AMIS_80220 PF02397 Bacterial sugar transferase AMIS_80230 PF07694 5TMR of 5TMR-LYT AMIS_80230 PF06580 Histidine kinase AMIS_80240 PF00072 Response regulator receiver domain AMIS_80240 PF04397 LytTr DNA-binding domain AMIS_80250 PF00486 Transcriptional regulatory protein, C terminal AMIS_80250 PF00072 Response regulator receiver domain AMIS_80260 PF00672 HAMP domain AMIS_80260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_80260 PF00512 His Kinase A (phospho-acceptor) domain AMIS_80280 PF00474 Sodium:solute symporter family AMIS_80290 PF00005 ABC transporter AMIS_80290 PF13732 Domain of unknown function (DUF4162) AMIS_80350 PF00474 Sodium:solute symporter family AMIS_80360 PF03816 Cell envelope-related transcriptional attenuator domain AMIS_80380 PF00581 Rhodanese-like domain AMIS_80390 PF03009 Glycerophosphoryl diester phosphodiesterase family AMIS_8040 PF02585 GlcNAc-PI de-N-acetylase AMIS_80400 PF00672 HAMP domain AMIS_80400 PF00512 His Kinase A (phospho-acceptor) domain AMIS_80400 PF18698 Histidine kinase sensor domain AMIS_80400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_80470 PF01842 ACT domain AMIS_80470 PF00800 Prephenate dehydratase AMIS_80500 PF02566 OsmC-like protein AMIS_80520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMIS_80520 PF02403 Seryl-tRNA synthetase N-terminal domain AMIS_80550 PF10759 Protein of unknown function (DUF2587) AMIS_80570 PF01037 Lrp/AsnC ligand binding domain AMIS_8060 PF00563 EAL domain AMIS_8060 PF03707 Bacterial signalling protein N terminal repeat AMIS_8060 PF00990 Diguanylate cyclase, GGDEF domain AMIS_80610 PF02634 FdhD/NarQ family AMIS_80620 PF16655 PhoD-like phosphatase, N-terminal domain AMIS_80620 PF09423 PhoD-like phosphatase AMIS_80630 PF16655 PhoD-like phosphatase, N-terminal domain AMIS_80630 PF09423 PhoD-like phosphatase AMIS_80670 PF06463 Molybdenum Cofactor Synthesis C AMIS_80670 PF04055 Radical SAM superfamily AMIS_80700 PF00149 Calcineurin-like phosphoesterase AMIS_80710 PF13361 UvrD-like helicase C-terminal domain AMIS_80710 PF00580 UvrD/REP helicase N-terminal domain AMIS_80720 PF01478 Type IV leader peptidase family AMIS_80720 PF06750 Bacterial Peptidase A24 N-terminal domain AMIS_80770 PF02391 MoaE protein AMIS_80780 PF03454 MoeA C-terminal region (domain IV) AMIS_80780 PF03453 MoeA N-terminal region (domain I and II) AMIS_80780 PF00994 Probable molybdopterin binding domain AMIS_80790 PF00994 Probable molybdopterin binding domain AMIS_80790 PF01967 MoaC family AMIS_80800 PF01967 MoaC family AMIS_80810 PF08448 PAS fold AMIS_80810 PF00990 Diguanylate cyclase, GGDEF domain AMIS_80810 PF00563 EAL domain AMIS_80810 PF08447 PAS fold AMIS_80850 PF00772 DnaB-like helicase N terminal domain AMIS_80850 PF03796 DnaB-like helicase C terminal domain AMIS_80880 PF03948 Ribosomal protein L9, C-terminal domain AMIS_80880 PF01281 Ribosomal protein L9, N-terminal domain AMIS_80890 PF01084 Ribosomal protein S18 AMIS_80900 PF00436 Single-strand binding protein family AMIS_80910 PF01250 Ribosomal protein S6 AMIS_80930 PF01261 Xylose isomerase-like TIM barrel AMIS_80960 PF00912 Transglycosylase AMIS_80960 PF00905 Penicillin binding protein transpeptidase domain AMIS_80970 PF17249 Family of unknown function (DUF5318) AMIS_80980 PF03551 Transcriptional regulator PadR-like family AMIS_80990 PF01658 Myo-inositol-1-phosphate synthase AMIS_8100 PF03190 Protein of unknown function, DUF255 AMIS_81000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMIS_81000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMIS_81010 PF04542 Sigma-70 region 2 AMIS_81010 PF08281 Sigma-70, region 4 AMIS_81010 PF12680 SnoaL-like domain AMIS_81050 PF13735 tRNA nucleotidyltransferase domain 2 putative AMIS_81050 PF12627 Probable RNA and SrmB- binding site of polymerase A AMIS_81050 PF01743 Poly A polymerase head domain AMIS_81070 PF03023 Lipid II flippase MurJ AMIS_81080 PF03793 PASTA domain AMIS_81080 PF00069 Protein kinase domain AMIS_81090 PF08281 Sigma-70, region 4 AMIS_81090 PF04542 Sigma-70 region 2 AMIS_81130 PF01471 Putative peptidoglycan binding domain AMIS_81130 PF01520 N-acetylmuramoyl-L-alanine amidase AMIS_81150 PF00155 Aminotransferase class I and II AMIS_81160 PF07478 D-ala D-ala ligase C-terminus AMIS_81160 PF01820 D-ala D-ala ligase N-terminus AMIS_81180 PF17762 HTH domain found in ParB protein AMIS_81180 PF02195 ParB-like nuclease domain AMIS_81190 PF13614 AAA domain AMIS_8120 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMIS_8120 PF02222 ATP-grasp domain AMIS_81200 PF02527 rRNA small subunit methyltransferase G AMIS_81220 PF02096 60Kd inner membrane protein AMIS_81230 PF01809 Putative membrane protein insertion efficiency factor AMIS_81240 PF00825 Ribonuclease P AMIS_81250 PF00468 Ribosomal protein L34 AMIS_8130 PF00731 AIR carboxylase AMIS_8150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMIS_8150 PF02770 Acyl-CoA dehydrogenase, middle domain AMIS_8150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMIS_8160 PF00356 Bacterial regulatory proteins, lacI family AMIS_8170 PF01614 Bacterial transcriptional regulator AMIS_8170 PF09339 IclR helix-turn-helix domain AMIS_8190 PF00067 Cytochrome P450 AMIS_8200 PF00107 Zinc-binding dehydrogenase AMIS_8200 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_8210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMIS_8210 PF03466 LysR substrate binding domain AMIS_8230 PF00356 Bacterial regulatory proteins, lacI family AMIS_8250 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_8260 PF00528 Binding-protein-dependent transport system inner membrane component AMIS_8280 PF00356 Bacterial regulatory proteins, lacI family AMIS_830 PF00012 Hsp70 protein AMIS_8340 PF01594 AI-2E family transporter AMIS_8390 PF01638 HxlR-like helix-turn-helix AMIS_840 PF01025 GrpE AMIS_8410 PF00356 Bacterial regulatory proteins, lacI family AMIS_8420 PF00652 Ricin-type beta-trefoil lectin domain AMIS_8420 PF16483 Beta-1,3-glucanase AMIS_8450 PF07690 Major Facilitator Superfamily AMIS_8480 PF13193 AMP-binding enzyme C-terminal domain AMIS_8480 PF00501 AMP-binding enzyme AMIS_850 PF00684 DnaJ central domain AMIS_850 PF01556 DnaJ C terminal domain AMIS_850 PF00226 DnaJ domain AMIS_8500 PF13439 Glycosyltransferase Family 4 AMIS_8510 PF00483 Nucleotidyl transferase AMIS_8510 PF01050 Mannose-6-phosphate isomerase AMIS_8530 PF00881 Nitroreductase family AMIS_8530 PF01996 F420-0:Gamma-glutamyl ligase AMIS_8560 PF04055 Radical SAM superfamily AMIS_8570 PF02467 Transcription factor WhiB AMIS_860 PF13411 MerR HTH family regulatory protein AMIS_8600 PF01522 Polysaccharide deacetylase AMIS_8620 PF00171 Aldehyde dehydrogenase family AMIS_8640 PF04493 Endonuclease V AMIS_8650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMIS_8650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMIS_8650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMIS_8650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMIS_8660 PF03966 Trm112p-like protein AMIS_8690 PF01238 Phosphomannose isomerase type I AMIS_8700 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIS_8700 PF05221 S-adenosyl-L-homocysteine hydrolase AMIS_8730 PF00072 Response regulator receiver domain AMIS_8730 PF00486 Transcriptional regulatory protein, C terminal AMIS_8740 PF00512 His Kinase A (phospho-acceptor) domain AMIS_8740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMIS_8740 PF00672 HAMP domain AMIS_8770 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMIS_8770 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMIS_8780 PF13302 Acetyltransferase (GNAT) domain AMIS_8790 PF02810 SEC-C motif AMIS_8790 PF07517 SecA DEAD-like domain AMIS_8790 PF01043 SecA preprotein cross-linking domain AMIS_8790 PF07516 SecA Wing and Scaffold domain AMIS_880 PF00999 Sodium/hydrogen exchanger family AMIS_880 PF02254 TrkA-N domain AMIS_8850 PF03462 PCRF domain AMIS_8850 PF00472 RF-1 domain AMIS_8860 PF00005 ABC transporter AMIS_8870 PF18075 FtsX extracellular domain AMIS_8870 PF02687 FtsX-like permease family AMIS_8880 PF01551 Peptidase family M23 AMIS_8880 PF01464 Transglycosylase SLT domain AMIS_8880 PF10145 Phage-related minor tail protein AMIS_8890 PF01668 SmpB protein AMIS_8910 PF12802 MarR family AMIS_8920 PF08659 KR domain AMIS_8920 PF08240 Alcohol dehydrogenase GroES-like domain AMIS_8920 PF02801 Beta-ketoacyl synthase, C-terminal domain AMIS_8920 PF00109 Beta-ketoacyl synthase, N-terminal domain AMIS_8920 PF00698 Acyl transferase domain AMIS_8920 PF16197 Ketoacyl-synthetase C-terminal extension AMIS_8920 PF14765 Polyketide synthase dehydratase AMIS_8920 PF00550 Phosphopantetheine attachment site AMIS_8960 PF01048 Phosphorylase superfamily AMIS_8970 PF02622 Uncharacterized ACR, COG1678 AMIS_90 PF03989 DNA gyrase C-terminal domain, beta-propeller AMIS_90 PF00521 DNA gyrase/topoisomerase IV, subunit A AMIS_900 PF07690 Major Facilitator Superfamily AMIS_9020 PF06750 Bacterial Peptidase A24 N-terminal domain AMIS_9020 PF01478 Type IV leader peptidase family AMIS_9030 PF07963 Prokaryotic N-terminal methylation motif AMIS_9030 PF00114 Pilin (bacterial filament) AMIS_9040 PF00482 Type II secretion system (T2SS), protein F AMIS_9050 PF00437 Type II/IV secretion system protein AMIS_9060 PF00437 Type II/IV secretion system protein AMIS_9060 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMIS_9070 PF12833 Helix-turn-helix domain AMIS_9090 PF01740 STAS domain AMIS_910 PF17871 AAA lid domain AMIS_910 PF10431 C-terminal, D2-small domain, of ClpB protein AMIS_910 PF02861 Clp amino terminal domain, pathogenicity island component AMIS_910 PF00004 ATPase family associated with various cellular activities (AAA) AMIS_910 PF07724 AAA domain (Cdc48 subfamily) AMIS_9110 PF03707 Bacterial signalling protein N terminal repeat AMIS_9110 PF00990 Diguanylate cyclase, GGDEF domain AMIS_9110 PF00563 EAL domain AMIS_9250 PF13195 Protein of unknown function (DUF4011) AMIS_9250 PF13086 AAA domain AMIS_9250 PF13087 AAA domain AMIS_9260 PF08448 PAS fold AMIS_9260 PF00563 EAL domain AMIS_9260 PF00990 Diguanylate cyclase, GGDEF domain AMIS_9280 PF01047 MarR family AMIS_9300 PF04679 ATP dependent DNA ligase C terminal region AMIS_9300 PF01068 ATP dependent DNA ligase domain AMIS_9300 PF13298 DNA polymerase Ligase (LigD) AMIS_9320 PF01494 FAD binding domain AMIS_9330 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMIS_9340 PF07690 Major Facilitator Superfamily AMIS_9370 PF00857 Isochorismatase family AMIS_9380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMIS_9380 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMIS_9390 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMIS_9410 PF14464 Prokaryotic homologs of the JAB domain AMIS_9420 PF02597 ThiS family AMIS_9430 PF00291 Pyridoxal-phosphate dependent enzyme AMIS_9450 PF12706 Beta-lactamase superfamily domain AMIS_9460 PF00534 Glycosyl transferases group 1 AMIS_9460 PF13579 Glycosyl transferase 4-like domain AMIS_9470 PF01138 3' exoribonuclease family, domain 1 AMIS_9470 PF03725 3' exoribonuclease family, domain 2 AMIS_9480 PF01725 Ham1 family AMIS_9500 PF00221 Aromatic amino acid lyase AMIS_9510 PF01979 Amidohydrolase family AMIS_9520 PF01979 Amidohydrolase family AMIS_9530 PF01546 Peptidase family M20/M25/M40 AMIS_9530 PF07687 Peptidase dimerisation domain AMIS_9540 PF17391 Urocanase N-terminal domain AMIS_9540 PF01175 Urocanase Rossmann-like domain AMIS_9540 PF17392 Urocanase C-terminal domain AMIS_9570 PF03476 MOSC N-terminal beta barrel domain AMIS_9570 PF03473 MOSC domain AMIS_9570 PF00111 2Fe-2S iron-sulfur cluster binding domain AMIS_960 PF01022 Bacterial regulatory protein, arsR family AMIS_9610 PF00578 AhpC/TSA family AMIS_9620 PF02675 S-adenosylmethionine decarboxylase AMIS_9670 PF04542 Sigma-70 region 2 AMIS_9670 PF08281 Sigma-70, region 4 AMIS_9680 PF05425 Copper resistance protein D AMIS_9710 PF00929 Exonuclease AMIS_9720 PF00553 Cellulose binding domain AMIS_9720 PF00041 Fibronectin type III domain AMIS_9720 PF01341 Glycosyl hydrolases family 6 AMIS_9760 PF13977 BetI-type transcriptional repressor, C-terminal AMIS_9760 PF00440 Bacterial regulatory proteins, tetR family AMIS_9780 PF17964 Bacterial Ig domain AMIS_9780 PF03734 L,D-transpeptidase catalytic domain AMIS_9790 PF17964 Bacterial Ig domain AMIS_9790 PF03734 L,D-transpeptidase catalytic domain AMIS_980 PF09335 SNARE associated Golgi protein AMIS_9800 PF00457 Glycosyl hydrolases family 11 AMIS_9800 PF01522 Polysaccharide deacetylase AMIS_9810 PF02810 SEC-C motif AMIS_9810 PF07517 SecA DEAD-like domain AMIS_9810 PF01043 SecA preprotein cross-linking domain AMIS_9810 PF07516 SecA Wing and Scaffold domain AMIS_9830 PF03358 NADPH-dependent FMN reductase AMIS_9840 PF00884 Sulfatase AMIS_9840 PF16347 Domain of unknown function (DUF4976) AMIS_9850 PF00067 Cytochrome P450 AMIS_990 PF00149 Calcineurin-like phosphoesterase AMIS_9970 PF03442 Carbohydrate binding domain X2 AMIS_9970 PF00150 Cellulase (glycosyl hydrolase family 5) AMIS_9970 PF18448 Carbohydrate binding domain AMIS_9980 PF14310 Fibronectin type III-like domain AMIS_9980 PF00933 Glycosyl hydrolase family 3 N terminal domain AMIS_9980 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMIS_9980 PF07691 PA14 domain