AMIS_10 SM00382 ATPases associated with a variety of cellular activities AMIS_10 SM00760 Bacterial dnaA protein helix-turn-helix domain AMIS_10050 SM00342 helix_turn_helix, arabinose operon control protein AMIS_10060 SM00450 Rhodanese Homology Domain AMIS_10090 SM00448 cheY-homologous receiver domain AMIS_10160 SM00382 ATPases associated with a variety of cellular activities AMIS_10260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_10260 SM00387 Histidine kinase-like ATPases AMIS_10270 SM00960 Roadblock/LC7 domain AMIS_10300 SM00354 helix_turn _helix lactose operon repressor AMIS_10330 SM00327 von Willebrand factor (vWF) type A domain AMIS_10370 SM00458 Ricin-type beta-trefoil AMIS_10380 SM00458 Ricin-type beta-trefoil AMIS_10380 SM00656 AMIS_10380 AMIS_10420 SM00642 Alpha-amylase domain AMIS_10580 SM01012 AMIS_10580 AMIS_10610 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_10640 SM00421 helix_turn_helix, Lux Regulon AMIS_10640 SM00448 cheY-homologous receiver domain AMIS_10740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_10910 SM00382 ATPases associated with a variety of cellular activities AMIS_10990 SM00507 HNH nucleases AMIS_1110 SM00788 Adenylosuccinate synthetase AMIS_11170 SM00342 helix_turn_helix, arabinose operon control protein AMIS_11190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_1120 SM01209 AMIS_1120 AMIS_1120 SM01210 AMIS_1120 AMIS_11250 SM00382 ATPases associated with a variety of cellular activities AMIS_11250 SM00994 ClpX C4-type zinc finger AMIS_11250 SM01086 C-terminal, D2-small domain, of ClpB protein AMIS_11330 SM00562 AMIS_11330 AMIS_11340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_11340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_11360 SM00563 Phosphate acyltransferases AMIS_11390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_11390 SM00091 PAS domain AMIS_11390 SM00331 Sigma factor PP2C-like phosphatases AMIS_11410 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_11430 SM00316 Ribosomal protein S1-like RNA-binding domain AMIS_1150 SM00998 Adenylosuccinate lyase C-terminus AMIS_11500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_11500 SM00091 PAS domain AMIS_11500 SM00387 Histidine kinase-like ATPases AMIS_11500 SM00448 cheY-homologous receiver domain AMIS_11530 SM00855 Phosphoglycerate mutase family AMIS_11580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIS_1160 SM00020 Trypsin-like serine protease AMIS_11670 SM00838 Elongation factor G C-terminus AMIS_11690 SM00091 PAS domain AMIS_11720 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_11750 SM00271 DnaJ molecular chaperone homology domain AMIS_11780 SM01217 AMIS_11780 AMIS_1180 SM01211 AMIS_1180 AMIS_11830 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_11830 SM01091 Transporter associated domain AMIS_11950 SM00481 DNA polymerase alpha chain like domain AMIS_11970 SM00382 ATPases associated with a variety of cellular activities AMIS_12030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_12050 SM00382 ATPases associated with a variety of cellular activities AMIS_12150 SM00421 helix_turn_helix, Lux Regulon AMIS_12150 SM00448 cheY-homologous receiver domain AMIS_12190 SM00960 Roadblock/LC7 domain AMIS_12230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_12240 SM00400 zinc finger AMIS_12240 SM00493 AMIS_12240 AMIS_12240 SM00766 DNA primase DnaG DnaB-binding AMIS_12260 SM00382 ATPases associated with a variety of cellular activities AMIS_12310 SM00382 ATPases associated with a variety of cellular activities AMIS_12500 SM00382 ATPases associated with a variety of cellular activities AMIS_12630 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_1270 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMIS_12890 SM00836 DALR anticodon binding domain AMIS_12890 SM01016 Arginyl tRNA synthetase N terminal dom AMIS_12920 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_13020 SM00947 Carbonic anhydrase AMIS_13070 SM00825 Beta-ketoacyl synthase AMIS_13100 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIS_13160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_13160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_13190 SM00861 Transketolase, pyrimidine binding domain AMIS_13240 SM00943 Bifunctional DNA primase/polymerase, N-terminal AMIS_13250 SM00530 Helix-turn-helix XRE-family like proteins AMIS_13290 SM00855 Phosphoglycerate mutase family AMIS_13300 SM00636 AMIS_13300 AMIS_13400 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIS_13440 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMIS_13470 SM00955 AMIS_13470 AMIS_13500 SM01230 AMIS_13500 AMIS_13540 SM00829 Enoylreductase AMIS_13580 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_13650 SM01230 AMIS_13650 AMIS_13740 SM00382 ATPases associated with a variety of cellular activities AMIS_13770 SM00382 ATPases associated with a variety of cellular activities AMIS_13770 SM00710 Parallel beta-helix repeats AMIS_13800 SM00421 helix_turn_helix, Lux Regulon AMIS_13820 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_13980 SM00028 Tetratricopeptide repeats AMIS_14020 SM00382 ATPases associated with a variety of cellular activities AMIS_14030 SM00530 Helix-turn-helix XRE-family like proteins AMIS_14280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_14280 SM00954 Region found in RelA / SpoT proteins AMIS_14290 SM00465 GIY-YIG type nucleases (URI domain) AMIS_14290 SM00479 AMIS_14290 AMIS_14340 SM00382 ATPases associated with a variety of cellular activities AMIS_14370 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_14380 SM00421 helix_turn_helix, Lux Regulon AMIS_14380 SM00448 cheY-homologous receiver domain AMIS_14390 SM00387 Histidine kinase-like ATPases AMIS_1440 SM00422 helix_turn_helix, mercury resistance AMIS_14480 SM00563 Phosphate acyltransferases AMIS_14490 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_14490 SM00419 helix_turn_helix, cAMP Regulatory protein AMIS_14680 SM00495 Chitin-binding domain type 3 AMIS_14680 SM00636 AMIS_14680 AMIS_14730 SM00518 AP endonuclease family 2 AMIS_14740 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_14740 SM00740 AMIS_14740 AMIS_14800 SM00507 HNH nucleases AMIS_14810 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_14890 SM00327 von Willebrand factor (vWF) type A domain AMIS_14980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_15020 SM00481 DNA polymerase alpha chain like domain AMIS_15070 SM00460 Transglutaminase/protease-like homologues AMIS_15260 SM00864 Tubulin/FtsZ family, GTPase domain AMIS_15260 SM00865 Tubulin/FtsZ family, C-terminal domain AMIS_15320 SM01152 AMIS_15320 AMIS_15380 SM00481 DNA polymerase alpha chain like domain AMIS_15400 SM00464 Found in ATP-dependent protease La (LON) AMIS_15450 SM01211 AMIS_15450 AMIS_15530 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_15560 SM00382 ATPases associated with a variety of cellular activities AMIS_15570 SM00382 ATPases associated with a variety of cellular activities AMIS_15580 SM00363 S4 RNA-binding domain AMIS_15580 SM01390 AMIS_15580 AMIS_15760 SM00448 cheY-homologous receiver domain AMIS_15760 SM01012 AMIS_15760 AMIS_15790 SM00382 ATPases associated with a variety of cellular activities AMIS_15800 SM00382 ATPases associated with a variety of cellular activities AMIS_15820 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMIS_15820 SM00474 3'-5' exonuclease AMIS_15820 SM00475 5'-3' exonuclease AMIS_15820 SM00482 DNA polymerase A domain AMIS_15830 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_15870 SM00316 Ribosomal protein S1-like RNA-binding domain AMIS_15890 SM00487 DEAD-like helicases superfamily AMIS_15890 SM00490 helicase superfamily c-terminal domain AMIS_15940 SM00649 Ribosomal protein L11/L12 AMIS_15960 SM00960 Roadblock/LC7 domain AMIS_16000 SM00849 Metallo-beta-lactamase superfamily AMIS_16060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIS_16060 SM00465 GIY-YIG type nucleases (URI domain) AMIS_16100 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIS_16200 SM00861 Transketolase, pyrimidine binding domain AMIS_16290 SM00382 ATPases associated with a variety of cellular activities AMIS_16360 SM00855 Phosphoglycerate mutase family AMIS_16410 SM00382 ATPases associated with a variety of cellular activities AMIS_16440 SM00382 ATPases associated with a variety of cellular activities AMIS_16450 SM00986 Uracil DNA glycosylase superfamily AMIS_16450 SM00987 UreE urease accessory protein, C-terminal domain AMIS_16490 SM00090 RIO-like kinase AMIS_16570 SM00862 Transcriptional regulatory protein, C terminal AMIS_16570 SM01043 Bacterial transcriptional activator domain AMIS_16580 SM01011 Aminopeptidase P, N-terminal domain AMIS_16660 SM00327 von Willebrand factor (vWF) type A domain AMIS_16670 SM00421 helix_turn_helix, Lux Regulon AMIS_16670 SM00448 cheY-homologous receiver domain AMIS_16690 SM00822 AMIS_16690 AMIS_16780 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_16800 SM00244 prohibitin homologues AMIS_16850 SM00448 cheY-homologous receiver domain AMIS_16850 SM00862 Transcriptional regulatory protein, C terminal AMIS_1690 SM00387 Histidine kinase-like ATPases AMIS_16990 SM00482 DNA polymerase A domain AMIS_1700 SM00331 Sigma factor PP2C-like phosphatases AMIS_17000 SM01018 B12 binding domain AMIS_17040 SM00421 helix_turn_helix, Lux Regulon AMIS_17040 SM00448 cheY-homologous receiver domain AMIS_17060 SM00267 diguanylate cyclase AMIS_1710 SM00387 Histidine kinase-like ATPases AMIS_1710 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17140 SM00448 cheY-homologous receiver domain AMIS_17150 SM01217 AMIS_17150 AMIS_1720 SM00331 Sigma factor PP2C-like phosphatases AMIS_1720 SM00448 cheY-homologous receiver domain AMIS_17200 SM00710 Parallel beta-helix repeats AMIS_17340 SM00091 PAS domain AMIS_17340 SM00387 Histidine kinase-like ATPases AMIS_17340 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17340 SM00448 cheY-homologous receiver domain AMIS_17350 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_17390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_17390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_17390 SM00091 PAS domain AMIS_17390 SM00387 Histidine kinase-like ATPases AMIS_17390 SM00388 His Kinase A (phosphoacceptor) domain AMIS_1740 SM00382 ATPases associated with a variety of cellular activities AMIS_17430 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_17430 SM01091 Transporter associated domain AMIS_17480 SM00387 Histidine kinase-like ATPases AMIS_17480 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17490 SM00387 Histidine kinase-like ATPases AMIS_17490 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17500 SM00448 cheY-homologous receiver domain AMIS_17500 SM00862 Transcriptional regulatory protein, C terminal AMIS_17510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_17510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_17630 SM00387 Histidine kinase-like ATPases AMIS_17630 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17630 SM01079 AMIS_17630 AMIS_17660 SM00387 Histidine kinase-like ATPases AMIS_17660 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_17670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_17670 SM00091 PAS domain AMIS_17670 SM00387 Histidine kinase-like ATPases AMIS_17670 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_17690 SM00387 Histidine kinase-like ATPases AMIS_17690 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17700 SM00091 PAS domain AMIS_17700 SM00387 Histidine kinase-like ATPases AMIS_17700 SM00388 His Kinase A (phosphoacceptor) domain AMIS_17870 SM00642 Alpha-amylase domain AMIS_17880 SM00421 helix_turn_helix, Lux Regulon AMIS_17900 SM00421 helix_turn_helix, Lux Regulon AMIS_180 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_1800 SM00331 Sigma factor PP2C-like phosphatases AMIS_1810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_1810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_1810 SM00387 Histidine kinase-like ATPases AMIS_1810 SM00388 His Kinase A (phosphoacceptor) domain AMIS_1810 SM00448 cheY-homologous receiver domain AMIS_18170 SM00421 helix_turn_helix, Lux Regulon AMIS_18180 SM00382 ATPases associated with a variety of cellular activities AMIS_1820 SM00448 cheY-homologous receiver domain AMIS_18230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_18230 SM00387 Histidine kinase-like ATPases AMIS_18230 SM00388 His Kinase A (phosphoacceptor) domain AMIS_18250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_18440 SM00450 Rhodanese Homology Domain AMIS_18580 SM00862 Transcriptional regulatory protein, C terminal AMIS_18580 SM01043 Bacterial transcriptional activator domain AMIS_18610 SM00091 PAS domain AMIS_18610 SM00387 Histidine kinase-like ATPases AMIS_18610 SM00448 cheY-homologous receiver domain AMIS_18620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_18620 SM00091 PAS domain AMIS_18620 SM00387 Histidine kinase-like ATPases AMIS_18620 SM00388 His Kinase A (phosphoacceptor) domain AMIS_18620 SM00448 cheY-homologous receiver domain AMIS_18690 SM00642 Alpha-amylase domain AMIS_1870 SM00855 Phosphoglycerate mutase family AMIS_18720 SM00849 Metallo-beta-lactamase superfamily AMIS_18730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_18730 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_18730 SM00267 diguanylate cyclase AMIS_18760 SM00257 Lysin motif AMIS_18800 SM00984 UDP binding domain AMIS_18850 SM00327 von Willebrand factor (vWF) type A domain AMIS_18880 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMIS_18930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_18930 SM00091 PAS domain AMIS_18930 SM00387 Histidine kinase-like ATPases AMIS_18930 SM00388 His Kinase A (phosphoacceptor) domain AMIS_18930 SM00448 cheY-homologous receiver domain AMIS_18950 SM00422 helix_turn_helix, mercury resistance AMIS_18950 SM00871 Bacterial transcription activator, effector binding domain AMIS_19110 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMIS_19210 SM00903 Flavin reductase like domain AMIS_19360 SM00862 Transcriptional regulatory protein, C terminal AMIS_19360 SM01043 Bacterial transcriptional activator domain AMIS_19480 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_19690 SM00382 ATPases associated with a variety of cellular activities AMIS_1990 SM00344 helix_turn_helix ASNC type AMIS_20 SM00480 DNA polymerase III beta subunit AMIS_2010 SM00487 DEAD-like helicases superfamily AMIS_2010 SM00490 helicase superfamily c-terminal domain AMIS_210 SM00450 Rhodanese Homology Domain AMIS_2100 SM00382 ATPases associated with a variety of cellular activities AMIS_21070 SM00382 ATPases associated with a variety of cellular activities AMIS_21140 SM00421 helix_turn_helix, Lux Regulon AMIS_21290 SM00530 Helix-turn-helix XRE-family like proteins AMIS_2150 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_21540 SM00530 Helix-turn-helix XRE-family like proteins AMIS_21560 SM00530 Helix-turn-helix XRE-family like proteins AMIS_21580 SM00382 ATPases associated with a variety of cellular activities AMIS_21680 SM00882 Coenzyme A transferase AMIS_21690 SM00882 Coenzyme A transferase AMIS_21710 SM00822 AMIS_21710 AMIS_21730 SM00849 Metallo-beta-lactamase superfamily AMIS_21760 SM00822 AMIS_21760 AMIS_21770 SM00822 AMIS_21770 AMIS_21790 SM00829 Enoylreductase AMIS_21840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_21840 SM00895 AMIS_21840 AMIS_21900 SM01068 Putative carbohydrate binding domain AMIS_220 SM00387 Histidine kinase-like ATPases AMIS_2200 SM00487 DEAD-like helicases superfamily AMIS_2200 SM00490 helicase superfamily c-terminal domain AMIS_22060 SM00421 helix_turn_helix, Lux Regulon AMIS_22060 SM00448 cheY-homologous receiver domain AMIS_22090 SM00382 ATPases associated with a variety of cellular activities AMIS_22190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_22190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_22270 SM00421 helix_turn_helix, Lux Regulon AMIS_2230 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_22320 SM00641 Glycosyl hydrolases family 25 AMIS_22370 SM00530 Helix-turn-helix XRE-family like proteins AMIS_22380 SM00421 helix_turn_helix, Lux Regulon AMIS_22410 SM00382 ATPases associated with a variety of cellular activities AMIS_22440 SM01007 Class II Aldolase and Adducin N-terminal domain AMIS_22480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_22480 SM00091 PAS domain AMIS_22480 SM00267 diguanylate cyclase AMIS_22600 SM00342 helix_turn_helix, arabinose operon control protein AMIS_22640 SM00960 Roadblock/LC7 domain AMIS_22650 SM00387 Histidine kinase-like ATPases AMIS_22700 SM00487 DEAD-like helicases superfamily AMIS_22700 SM00490 helicase superfamily c-terminal domain AMIS_22720 SM01236 AMIS_22720 AMIS_22730 SM00704 CDGSH-type zinc finger. Function unknown. AMIS_22740 SM00052 Putative diguanylate phosphodiesterase AMIS_22800 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_22800 SM00866 AMIS_22800 AMIS_22860 SM01022 AMIS_22860 AMIS_22870 SM00382 ATPases associated with a variety of cellular activities AMIS_22880 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIS_2290 SM00530 Helix-turn-helix XRE-family like proteins AMIS_22910 SM00382 ATPases associated with a variety of cellular activities AMIS_22930 SM00354 helix_turn _helix lactose operon repressor AMIS_22950 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_23000 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_23000 SM00895 AMIS_23000 AMIS_23030 SM00829 Enoylreductase AMIS_23050 SM00637 AMIS_23050 AMIS_23060 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMIS_23090 SM00382 ATPases associated with a variety of cellular activities AMIS_23100 SM00382 ATPases associated with a variety of cellular activities AMIS_23150 SM00382 ATPases associated with a variety of cellular activities AMIS_23160 SM00421 helix_turn_helix, Lux Regulon AMIS_23200 SM00954 Region found in RelA / SpoT proteins AMIS_23270 SM00632 AMIS_23270 AMIS_23270 SM00642 Alpha-amylase domain AMIS_23270 SM01065 Starch binding domain AMIS_23310 SM00631 AMIS_23310 AMIS_23360 SM00481 DNA polymerase alpha chain like domain AMIS_23380 SM00421 helix_turn_helix, Lux Regulon AMIS_23380 SM00448 cheY-homologous receiver domain AMIS_23440 SM01043 Bacterial transcriptional activator domain AMIS_23630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_23750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_23770 SM00357 Cold shock protein domain AMIS_23780 SM00421 helix_turn_helix, Lux Regulon AMIS_23780 SM00448 cheY-homologous receiver domain AMIS_23790 SM00387 Histidine kinase-like ATPases AMIS_23870 SM00656 AMIS_23870 AMIS_23890 SM00878 Biotin carboxylase C-terminal domain AMIS_23900 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_23900 SM01091 Transporter associated domain AMIS_24030 SM00421 helix_turn_helix, Lux Regulon AMIS_24030 SM00448 cheY-homologous receiver domain AMIS_24150 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_24150 SM00419 helix_turn_helix, cAMP Regulatory protein AMIS_24200 SM00450 Rhodanese Homology Domain AMIS_24220 SM00421 helix_turn_helix, Lux Regulon AMIS_24230 SM00267 diguanylate cyclase AMIS_24300 SM00421 helix_turn_helix, Lux Regulon AMIS_24410 SM00327 von Willebrand factor (vWF) type A domain AMIS_24470 SM00354 helix_turn _helix lactose operon repressor AMIS_24490 SM00382 ATPases associated with a variety of cellular activities AMIS_24530 SM00382 ATPases associated with a variety of cellular activities AMIS_24530 SM01086 C-terminal, D2-small domain, of ClpB protein AMIS_24550 SM00382 ATPases associated with a variety of cellular activities AMIS_24550 SM00530 Helix-turn-helix XRE-family like proteins AMIS_24560 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_24560 SM00895 AMIS_24560 AMIS_24590 SM00382 ATPases associated with a variety of cellular activities AMIS_24600 SM00382 ATPases associated with a variety of cellular activities AMIS_24610 SM01130 AMIS_24610 AMIS_24680 SM00421 helix_turn_helix, Lux Regulon AMIS_24690 SM00421 helix_turn_helix, Lux Regulon AMIS_24700 SM00331 Sigma factor PP2C-like phosphatases AMIS_24770 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_2480 SM00060 Fibronectin type 3 domain AMIS_24870 SM00382 ATPases associated with a variety of cellular activities AMIS_24910 SM00560 LamG-like jellyroll fold domain AMIS_250 SM00878 Biotin carboxylase C-terminal domain AMIS_25000 SM00530 Helix-turn-helix XRE-family like proteins AMIS_25030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_25030 SM00387 Histidine kinase-like ATPases AMIS_25030 SM00388 His Kinase A (phosphoacceptor) domain AMIS_25030 SM00448 cheY-homologous receiver domain AMIS_25060 SM00382 ATPases associated with a variety of cellular activities AMIS_25140 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_25140 SM00458 Ricin-type beta-trefoil AMIS_25140 SM00606 Cellulose Binding Domain Type IV AMIS_25150 SM00458 Ricin-type beta-trefoil AMIS_25160 SM00226 Low molecular weight phosphatase family AMIS_25180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_25240 SM00656 AMIS_25240 AMIS_25260 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_25410 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_25430 SM00448 cheY-homologous receiver domain AMIS_25540 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_25640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_25640 SM00091 PAS domain AMIS_25640 SM00387 Histidine kinase-like ATPases AMIS_25640 SM00388 His Kinase A (phosphoacceptor) domain AMIS_25640 SM00448 cheY-homologous receiver domain AMIS_25670 SM00422 helix_turn_helix, mercury resistance AMIS_25700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_25700 SM00387 Histidine kinase-like ATPases AMIS_25710 SM00448 cheY-homologous receiver domain AMIS_25720 SM00421 helix_turn_helix, Lux Regulon AMIS_25720 SM00448 cheY-homologous receiver domain AMIS_25730 SM00421 helix_turn_helix, Lux Regulon AMIS_25760 SM00421 helix_turn_helix, Lux Regulon AMIS_25800 SM00822 AMIS_25800 AMIS_25910 SM00421 helix_turn_helix, Lux Regulon AMIS_26030 SM00342 helix_turn_helix, arabinose operon control protein AMIS_26080 SM00387 Histidine kinase-like ATPases AMIS_26080 SM00388 His Kinase A (phosphoacceptor) domain AMIS_26090 SM00448 cheY-homologous receiver domain AMIS_26090 SM00862 Transcriptional regulatory protein, C terminal AMIS_2610 SM00530 Helix-turn-helix XRE-family like proteins AMIS_26130 SM00382 ATPases associated with a variety of cellular activities AMIS_26150 SM00448 cheY-homologous receiver domain AMIS_26150 SM00862 Transcriptional regulatory protein, C terminal AMIS_26160 SM00387 Histidine kinase-like ATPases AMIS_26160 SM00388 His Kinase A (phosphoacceptor) domain AMIS_26180 SM00382 ATPases associated with a variety of cellular activities AMIS_26200 SM00421 helix_turn_helix, Lux Regulon AMIS_26200 SM00448 cheY-homologous receiver domain AMIS_26210 SM00387 Histidine kinase-like ATPases AMIS_26280 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIS_26290 SM00020 Trypsin-like serine protease AMIS_26300 SM00354 helix_turn _helix lactose operon repressor AMIS_26460 SM00267 diguanylate cyclase AMIS_26470 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIS_26520 SM00421 helix_turn_helix, Lux Regulon AMIS_26520 SM00448 cheY-homologous receiver domain AMIS_26580 SM00829 Enoylreductase AMIS_26670 SM00429 ig-like, plexins, transcription factors AMIS_26720 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_26750 SM00382 ATPases associated with a variety of cellular activities AMIS_26820 SM00382 ATPases associated with a variety of cellular activities AMIS_26860 SM00421 helix_turn_helix, Lux Regulon AMIS_26860 SM00448 cheY-homologous receiver domain AMIS_26870 SM00382 ATPases associated with a variety of cellular activities AMIS_26890 SM00448 cheY-homologous receiver domain AMIS_26890 SM00862 Transcriptional regulatory protein, C terminal AMIS_26930 SM00448 cheY-homologous receiver domain AMIS_27050 SM00829 Enoylreductase AMIS_27110 SM00822 AMIS_27110 AMIS_27130 SM00881 CoA binding domain AMIS_27150 SM00267 diguanylate cyclase AMIS_27160 SM00903 Flavin reductase like domain AMIS_27170 SM00342 helix_turn_helix, arabinose operon control protein AMIS_27220 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_27310 SM00903 Flavin reductase like domain AMIS_27400 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_27420 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_27430 SM00421 helix_turn_helix, Lux Regulon AMIS_27430 SM00448 cheY-homologous receiver domain AMIS_27440 SM00387 Histidine kinase-like ATPases AMIS_27450 SM00382 ATPases associated with a variety of cellular activities AMIS_27470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_27500 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_27640 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_27650 SM00606 Cellulose Binding Domain Type IV AMIS_27660 SM00028 Tetratricopeptide repeats AMIS_27670 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_27670 SM00320 WD40 repeats AMIS_27690 SM00894 Excalibur calcium-binding domain AMIS_27770 SM00155 Phospholipase D. Active site motifs. AMIS_27840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_27840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_27880 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_27910 SM00633 Glycosyl hydrolase family 10 AMIS_27930 SM00267 diguanylate cyclase AMIS_27960 SM00458 Ricin-type beta-trefoil AMIS_28000 SM00458 Ricin-type beta-trefoil AMIS_28060 SM00382 ATPases associated with a variety of cellular activities AMIS_28130 SM00354 helix_turn _helix lactose operon repressor AMIS_28170 SM00382 ATPases associated with a variety of cellular activities AMIS_28280 SM00637 AMIS_28280 AMIS_28290 SM00633 Glycosyl hydrolase family 10 AMIS_28290 SM00637 AMIS_28290 AMIS_28300 SM00458 Ricin-type beta-trefoil AMIS_28310 SM00458 Ricin-type beta-trefoil AMIS_28320 SM00606 Cellulose Binding Domain Type IV AMIS_28330 SM00458 Ricin-type beta-trefoil AMIS_28340 SM00458 Ricin-type beta-trefoil AMIS_28470 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMIS_28510 SM00382 ATPases associated with a variety of cellular activities AMIS_28530 SM00267 diguanylate cyclase AMIS_28780 SM00421 helix_turn_helix, Lux Regulon AMIS_2880 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIS_28830 SM00448 cheY-homologous receiver domain AMIS_28850 SM00448 cheY-homologous receiver domain AMIS_2890 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMIS_2890 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMIS_29010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_29050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_29050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_29050 SM00387 Histidine kinase-like ATPases AMIS_29050 SM00388 His Kinase A (phosphoacceptor) domain AMIS_29050 SM00448 cheY-homologous receiver domain AMIS_29080 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMIS_29110 SM00421 helix_turn_helix, Lux Regulon AMIS_29110 SM00448 cheY-homologous receiver domain AMIS_29120 SM00387 Histidine kinase-like ATPases AMIS_29140 SM00382 ATPases associated with a variety of cellular activities AMIS_29250 SM00382 ATPases associated with a variety of cellular activities AMIS_29260 SM01329 AMIS_29260 AMIS_29270 SM00458 Ricin-type beta-trefoil AMIS_29280 SM00382 ATPases associated with a variety of cellular activities AMIS_29340 SM00829 Enoylreductase AMIS_29360 SM00387 Histidine kinase-like ATPases AMIS_29370 SM00421 helix_turn_helix, Lux Regulon AMIS_29370 SM00448 cheY-homologous receiver domain AMIS_29390 SM00421 helix_turn_helix, Lux Regulon AMIS_29400 SM00421 helix_turn_helix, Lux Regulon AMIS_29470 SM01217 AMIS_29470 AMIS_29490 SM00354 helix_turn _helix lactose operon repressor AMIS_29520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_29520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_29600 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_29600 SM00895 AMIS_29600 AMIS_29610 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIS_29650 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIS_29660 SM00822 AMIS_29660 AMIS_29680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_29680 SM00895 AMIS_29680 AMIS_29840 SM00020 Trypsin-like serine protease AMIS_29860 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIS_2990 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_29970 SM00448 cheY-homologous receiver domain AMIS_29970 SM00862 Transcriptional regulatory protein, C terminal AMIS_29980 SM00387 Histidine kinase-like ATPases AMIS_29980 SM00388 His Kinase A (phosphoacceptor) domain AMIS_30010 SM00448 cheY-homologous receiver domain AMIS_30030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_30030 SM00387 Histidine kinase-like ATPases AMIS_30030 SM00388 His Kinase A (phosphoacceptor) domain AMIS_30040 SM00909 Sporulation and spore germination AMIS_30090 SM00060 Fibronectin type 3 domain AMIS_30110 SM00422 helix_turn_helix, mercury resistance AMIS_30120 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_30120 SM00895 AMIS_30120 AMIS_30210 SM00226 Low molecular weight phosphatase family AMIS_30290 SM00422 helix_turn_helix, mercury resistance AMIS_30290 SM00871 Bacterial transcription activator, effector binding domain AMIS_30320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_30320 SM00387 Histidine kinase-like ATPases AMIS_30320 SM00388 His Kinase A (phosphoacceptor) domain AMIS_30330 SM00448 cheY-homologous receiver domain AMIS_30330 SM00862 Transcriptional regulatory protein, C terminal AMIS_30350 SM00448 cheY-homologous receiver domain AMIS_30350 SM00862 Transcriptional regulatory protein, C terminal AMIS_30430 SM00421 helix_turn_helix, Lux Regulon AMIS_30430 SM00448 cheY-homologous receiver domain AMIS_30470 SM00052 Putative diguanylate phosphodiesterase AMIS_30470 SM00091 PAS domain AMIS_30470 SM00267 diguanylate cyclase AMIS_30480 SM00052 Putative diguanylate phosphodiesterase AMIS_30480 SM00267 diguanylate cyclase AMIS_30520 SM00422 helix_turn_helix, mercury resistance AMIS_30650 SM00637 AMIS_30650 AMIS_30700 SM00831 Cation transporter/ATPase, N-terminus AMIS_30730 SM00421 helix_turn_helix, Lux Regulon AMIS_30890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_30890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_30890 SM00091 PAS domain AMIS_30890 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_30890 SM00387 Histidine kinase-like ATPases AMIS_30890 SM00388 His Kinase A (phosphoacceptor) domain AMIS_30910 SM00020 Trypsin-like serine protease AMIS_30940 SM00563 Phosphate acyltransferases AMIS_30950 SM00382 ATPases associated with a variety of cellular activities AMIS_30990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_30990 SM00091 PAS domain AMIS_30990 SM00387 Histidine kinase-like ATPases AMIS_30990 SM00388 His Kinase A (phosphoacceptor) domain AMIS_30990 SM00448 cheY-homologous receiver domain AMIS_310 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_31000 SM00387 Histidine kinase-like ATPases AMIS_31000 SM00388 His Kinase A (phosphoacceptor) domain AMIS_31010 SM00387 Histidine kinase-like ATPases AMIS_31010 SM00448 cheY-homologous receiver domain AMIS_31140 SM00897 FIST N domain AMIS_31140 SM01204 AMIS_31140 AMIS_31150 SM00052 Putative diguanylate phosphodiesterase AMIS_31150 SM00267 diguanylate cyclase AMIS_31200 SM00028 Tetratricopeptide repeats AMIS_31300 SM00255 Toll - interleukin 1 - resistance AMIS_31300 SM00320 WD40 repeats AMIS_31350 SM00822 AMIS_31350 AMIS_31380 SM00320 WD40 repeats AMIS_31530 SM00530 Helix-turn-helix XRE-family like proteins AMIS_31540 SM00822 AMIS_31540 AMIS_31570 SM00829 Enoylreductase AMIS_31670 SM00421 helix_turn_helix, Lux Regulon AMIS_31680 SM00421 helix_turn_helix, Lux Regulon AMIS_31690 SM00421 helix_turn_helix, Lux Regulon AMIS_31720 SM00421 helix_turn_helix, Lux Regulon AMIS_31750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_31750 SM00331 Sigma factor PP2C-like phosphatases AMIS_31800 SM00320 WD40 repeats AMIS_31890 SM00020 Trypsin-like serine protease AMIS_31900 SM00448 cheY-homologous receiver domain AMIS_31900 SM00862 Transcriptional regulatory protein, C terminal AMIS_31910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_31910 SM00387 Histidine kinase-like ATPases AMIS_31910 SM00388 His Kinase A (phosphoacceptor) domain AMIS_31920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_31920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_31940 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_320 SM00867 YceI-like domain AMIS_32000 SM00382 ATPases associated with a variety of cellular activities AMIS_32010 SM00382 ATPases associated with a variety of cellular activities AMIS_32070 SM00862 Transcriptional regulatory protein, C terminal AMIS_32130 SM00344 helix_turn_helix ASNC type AMIS_3230 SM00487 DEAD-like helicases superfamily AMIS_3230 SM00490 helicase superfamily c-terminal domain AMIS_32300 SM00530 Helix-turn-helix XRE-family like proteins AMIS_32310 SM00867 YceI-like domain AMIS_32320 SM00823 Phosphopantetheine attachment site AMIS_32330 SM00823 Phosphopantetheine attachment site AMIS_32360 SM00923 MbtH-like protein AMIS_32400 SM00028 Tetratricopeptide repeats AMIS_32400 SM00530 Helix-turn-helix XRE-family like proteins AMIS_32420 SM00823 Phosphopantetheine attachment site AMIS_32460 SM00710 Parallel beta-helix repeats AMIS_32500 SM00458 Ricin-type beta-trefoil AMIS_32500 SM00633 Glycosyl hydrolase family 10 AMIS_32520 SM00422 helix_turn_helix, mercury resistance AMIS_32520 SM00567 E-Z type HEAT repeats AMIS_32690 SM00342 helix_turn_helix, arabinose operon control protein AMIS_32710 SM00387 Histidine kinase-like ATPases AMIS_32720 SM00960 Roadblock/LC7 domain AMIS_3290 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMIS_3290 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMIS_3290 SM00493 AMIS_3290 AMIS_33010 SM00422 helix_turn_helix, mercury resistance AMIS_33030 SM00382 ATPases associated with a variety of cellular activities AMIS_33050 SM00530 Helix-turn-helix XRE-family like proteins AMIS_33060 SM00829 Enoylreductase AMIS_33100 SM00829 Enoylreductase AMIS_33120 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_33180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_33180 SM00091 PAS domain AMIS_33180 SM00387 Histidine kinase-like ATPases AMIS_33180 SM00388 His Kinase A (phosphoacceptor) domain AMIS_33180 SM00448 cheY-homologous receiver domain AMIS_33330 SM00986 Uracil DNA glycosylase superfamily AMIS_33330 SM00987 UreE urease accessory protein, C-terminal domain AMIS_33370 SM00382 ATPases associated with a variety of cellular activities AMIS_33390 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_33390 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMIS_3340 SM00382 ATPases associated with a variety of cellular activities AMIS_33420 SM00060 Fibronectin type 3 domain AMIS_33480 SM00637 AMIS_33480 AMIS_33500 SM00421 helix_turn_helix, Lux Regulon AMIS_33500 SM00448 cheY-homologous receiver domain AMIS_33540 SM00342 helix_turn_helix, arabinose operon control protein AMIS_33580 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_33620 SM00387 Histidine kinase-like ATPases AMIS_33630 SM00421 helix_turn_helix, Lux Regulon AMIS_33630 SM00448 cheY-homologous receiver domain AMIS_33640 SM00382 ATPases associated with a variety of cellular activities AMIS_33700 SM00861 Transketolase, pyrimidine binding domain AMIS_33720 SM00344 helix_turn_helix ASNC type AMIS_33730 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_33750 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIS_33830 SM00894 Excalibur calcium-binding domain AMIS_33870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_33870 SM00388 His Kinase A (phosphoacceptor) domain AMIS_33880 SM00387 Histidine kinase-like ATPases AMIS_33880 SM00388 His Kinase A (phosphoacceptor) domain AMIS_34060 SM00829 Enoylreductase AMIS_34150 SM00052 Putative diguanylate phosphodiesterase AMIS_34150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_34150 SM00267 diguanylate cyclase AMIS_34190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_34220 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_34230 SM00421 helix_turn_helix, Lux Regulon AMIS_34230 SM00448 cheY-homologous receiver domain AMIS_34320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_34320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_34460 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_34460 SM00895 AMIS_34460 AMIS_34470 SM00354 helix_turn _helix lactose operon repressor AMIS_34530 SM00849 Metallo-beta-lactamase superfamily AMIS_34580 SM00344 helix_turn_helix ASNC type AMIS_34610 SM01266 AMIS_34610 AMIS_34620 SM00822 AMIS_34620 AMIS_34620 SM01007 Class II Aldolase and Adducin N-terminal domain AMIS_34680 SM00860 SMI1 / KNR4 family AMIS_34690 SM00331 Sigma factor PP2C-like phosphatases AMIS_34760 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_34790 SM00421 helix_turn_helix, Lux Regulon AMIS_34790 SM00448 cheY-homologous receiver domain AMIS_34810 SM00382 ATPases associated with a variety of cellular activities AMIS_34920 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_34940 SM00028 Tetratricopeptide repeats AMIS_34940 SM00382 ATPases associated with a variety of cellular activities AMIS_350 SM00740 AMIS_350 AMIS_35010 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_35020 SM00882 Coenzyme A transferase AMIS_35030 SM00882 Coenzyme A transferase AMIS_35050 SM00354 helix_turn _helix lactose operon repressor AMIS_3510 SM00530 Helix-turn-helix XRE-family like proteins AMIS_35140 SM00637 AMIS_35140 AMIS_35140 SM01067 Cellulose binding domain AMIS_35200 SM00862 Transcriptional regulatory protein, C terminal AMIS_35200 SM01043 Bacterial transcriptional activator domain AMIS_35220 SM00382 ATPases associated with a variety of cellular activities AMIS_35340 SM00862 Transcriptional regulatory protein, C terminal AMIS_35390 SM00387 Histidine kinase-like ATPases AMIS_35390 SM00388 His Kinase A (phosphoacceptor) domain AMIS_35410 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_35430 SM00014 Acid phosphatase homologues AMIS_35460 SM00382 ATPases associated with a variety of cellular activities AMIS_35470 SM00382 ATPases associated with a variety of cellular activities AMIS_35530 SM00387 Histidine kinase-like ATPases AMIS_35530 SM00388 His Kinase A (phosphoacceptor) domain AMIS_35530 SM00448 cheY-homologous receiver domain AMIS_3560 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMIS_35730 SM00560 LamG-like jellyroll fold domain AMIS_35730 SM00758 AMIS_35730 AMIS_35810 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_35840 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_35860 SM00481 DNA polymerase alpha chain like domain AMIS_35870 SM00421 helix_turn_helix, Lux Regulon AMIS_35870 SM00448 cheY-homologous receiver domain AMIS_35960 SM01217 AMIS_35960 AMIS_35970 SM00342 helix_turn_helix, arabinose operon control protein AMIS_36060 SM00829 Enoylreductase AMIS_36070 SM00073 Histidine Phosphotransfer domain AMIS_36070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_36070 SM00387 Histidine kinase-like ATPases AMIS_36070 SM00388 His Kinase A (phosphoacceptor) domain AMIS_36070 SM00448 cheY-homologous receiver domain AMIS_36080 SM00448 cheY-homologous receiver domain AMIS_36100 SM00388 His Kinase A (phosphoacceptor) domain AMIS_36130 SM00382 ATPases associated with a variety of cellular activities AMIS_36200 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIS_36310 SM00855 Phosphoglycerate mutase family AMIS_36480 SM00382 ATPases associated with a variety of cellular activities AMIS_36520 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_36530 SM00052 Putative diguanylate phosphodiesterase AMIS_36530 SM00267 diguanylate cyclase AMIS_36580 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIS_3660 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_3660 SM00866 AMIS_3660 AMIS_36660 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_3670 SM00487 DEAD-like helicases superfamily AMIS_3670 SM00490 helicase superfamily c-terminal domain AMIS_36720 SM00637 AMIS_36720 AMIS_36880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_36880 SM00091 PAS domain AMIS_36880 SM00387 Histidine kinase-like ATPases AMIS_36880 SM00388 His Kinase A (phosphoacceptor) domain AMIS_36880 SM00448 cheY-homologous receiver domain AMIS_36960 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_37010 SM00448 cheY-homologous receiver domain AMIS_37030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_37030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_37070 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_37080 SM01230 AMIS_37080 AMIS_3710 SM00357 Cold shock protein domain AMIS_37120 SM00530 Helix-turn-helix XRE-family like proteins AMIS_37130 SM00382 ATPases associated with a variety of cellular activities AMIS_37140 SM00331 Sigma factor PP2C-like phosphatases AMIS_37200 SM00822 AMIS_37200 AMIS_37220 SM00020 Trypsin-like serine protease AMIS_37250 SM00606 Cellulose Binding Domain Type IV AMIS_37250 SM01217 AMIS_37250 AMIS_37260 SM00354 helix_turn _helix lactose operon repressor AMIS_37350 SM00382 ATPases associated with a variety of cellular activities AMIS_37400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_37400 SM00387 Histidine kinase-like ATPases AMIS_37410 SM00421 helix_turn_helix, Lux Regulon AMIS_37410 SM00448 cheY-homologous receiver domain AMIS_37430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_37430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_37440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_37440 SM00387 Histidine kinase-like ATPases AMIS_37440 SM00388 His Kinase A (phosphoacceptor) domain AMIS_37450 SM00448 cheY-homologous receiver domain AMIS_37500 SM00382 ATPases associated with a variety of cellular activities AMIS_37550 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_37570 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_37610 SM00382 ATPases associated with a variety of cellular activities AMIS_37670 SM00448 cheY-homologous receiver domain AMIS_37680 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_37680 SM00387 Histidine kinase-like ATPases AMIS_37680 SM00388 His Kinase A (phosphoacceptor) domain AMIS_37700 SM00344 helix_turn_helix ASNC type AMIS_37730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_37730 SM00331 Sigma factor PP2C-like phosphatases AMIS_37740 SM01217 AMIS_37740 AMIS_37780 SM00354 helix_turn _helix lactose operon repressor AMIS_37880 SM01060 AMIS_37880 AMIS_37960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_37960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_37970 SM00267 diguanylate cyclase AMIS_38060 SM00829 Enoylreductase AMIS_38100 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_38110 SM00382 ATPases associated with a variety of cellular activities AMIS_38190 SM00642 Alpha-amylase domain AMIS_38200 SM00354 helix_turn _helix lactose operon repressor AMIS_3830 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_38300 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_38310 SM00382 ATPases associated with a variety of cellular activities AMIS_38320 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_38410 SM00822 AMIS_38410 AMIS_38480 SM00862 Transcriptional regulatory protein, C terminal AMIS_38550 SM00562 AMIS_38550 AMIS_38560 SM00354 helix_turn _helix lactose operon repressor AMIS_38620 SM00382 ATPases associated with a variety of cellular activities AMIS_38740 SM00354 helix_turn _helix lactose operon repressor AMIS_38780 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AMIS_38800 SM00387 Histidine kinase-like ATPases AMIS_38800 SM00388 His Kinase A (phosphoacceptor) domain AMIS_38810 SM00354 helix_turn _helix lactose operon repressor AMIS_38840 SM00344 helix_turn_helix ASNC type AMIS_38880 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIS_38890 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMIS_38990 SM00060 Fibronectin type 3 domain AMIS_38990 SM00637 AMIS_38990 AMIS_39010 SM00829 Enoylreductase AMIS_39040 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_39080 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_39230 SM00421 helix_turn_helix, Lux Regulon AMIS_39230 SM00448 cheY-homologous receiver domain AMIS_39240 SM00331 Sigma factor PP2C-like phosphatases AMIS_39240 SM00387 Histidine kinase-like ATPases AMIS_39240 SM00388 His Kinase A (phosphoacceptor) domain AMIS_39240 SM00448 cheY-homologous receiver domain AMIS_39250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_39250 SM00331 Sigma factor PP2C-like phosphatases AMIS_39270 SM00829 Enoylreductase AMIS_39280 SM00421 helix_turn_helix, Lux Regulon AMIS_39290 SM00421 helix_turn_helix, Lux Regulon AMIS_39300 SM00421 helix_turn_helix, Lux Regulon AMIS_39310 SM00421 helix_turn_helix, Lux Regulon AMIS_39320 SM00421 helix_turn_helix, Lux Regulon AMIS_39400 SM00052 Putative diguanylate phosphodiesterase AMIS_39400 SM00267 diguanylate cyclase AMIS_39420 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_39440 SM00267 diguanylate cyclase AMIS_39580 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMIS_39580 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMIS_39600 SM00387 Histidine kinase-like ATPases AMIS_39600 SM00388 His Kinase A (phosphoacceptor) domain AMIS_39630 SM00382 ATPases associated with a variety of cellular activities AMIS_39660 SM00903 Flavin reductase like domain AMIS_39770 SM00342 helix_turn_helix, arabinose operon control protein AMIS_39770 SM00871 Bacterial transcription activator, effector binding domain AMIS_3980 SM00382 ATPases associated with a variety of cellular activities AMIS_39830 SM00354 helix_turn _helix lactose operon repressor AMIS_39870 SM00382 ATPases associated with a variety of cellular activities AMIS_39870 SM01086 C-terminal, D2-small domain, of ClpB protein AMIS_39900 SM00382 ATPases associated with a variety of cellular activities AMIS_39920 SM00382 ATPases associated with a variety of cellular activities AMIS_40000 SM00495 Chitin-binding domain type 3 AMIS_40000 SM00636 AMIS_40000 AMIS_40010 SM01110 AMIS_40010 AMIS_40020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_40020 SM00895 AMIS_40020 AMIS_40110 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMIS_40190 SM00642 Alpha-amylase domain AMIS_40250 SM00917 LeuA allosteric (dimerisation) domain AMIS_40260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_40260 SM00895 AMIS_40260 AMIS_40300 SM00052 Putative diguanylate phosphodiesterase AMIS_40300 SM00267 diguanylate cyclase AMIS_40320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_40320 SM00387 Histidine kinase-like ATPases AMIS_40320 SM00388 His Kinase A (phosphoacceptor) domain AMIS_40330 SM00448 cheY-homologous receiver domain AMIS_40330 SM00862 Transcriptional regulatory protein, C terminal AMIS_40350 SM00421 helix_turn_helix, Lux Regulon AMIS_40360 SM00637 AMIS_40360 AMIS_4040 SM00382 ATPases associated with a variety of cellular activities AMIS_40420 SM00637 AMIS_40420 AMIS_40480 SM00175 Rab subfamily of small GTPases AMIS_40480 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMIS_40550 SM00448 cheY-homologous receiver domain AMIS_40590 SM00382 ATPases associated with a variety of cellular activities AMIS_40630 SM00822 AMIS_40630 AMIS_40680 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_40680 SM00560 LamG-like jellyroll fold domain AMIS_40710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_40710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_40710 SM00387 Histidine kinase-like ATPases AMIS_40710 SM00388 His Kinase A (phosphoacceptor) domain AMIS_40940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_410 SM00240 Forkhead associated domain AMIS_41100 SM01130 AMIS_41100 AMIS_41190 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_41200 SM00382 ATPases associated with a variety of cellular activities AMIS_41270 SM00382 ATPases associated with a variety of cellular activities AMIS_41300 SM00421 helix_turn_helix, Lux Regulon AMIS_41300 SM00448 cheY-homologous receiver domain AMIS_41340 SM00382 ATPases associated with a variety of cellular activities AMIS_4140 SM00448 cheY-homologous receiver domain AMIS_41450 SM00421 helix_turn_helix, Lux Regulon AMIS_41450 SM00448 cheY-homologous receiver domain AMIS_41460 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_4150 SM00829 Enoylreductase AMIS_41510 SM00382 ATPases associated with a variety of cellular activities AMIS_41510 SM00421 helix_turn_helix, Lux Regulon AMIS_41550 SM00563 Phosphate acyltransferases AMIS_41600 SM00458 Ricin-type beta-trefoil AMIS_41650 SM00342 helix_turn_helix, arabinose operon control protein AMIS_41660 SM00829 Enoylreductase AMIS_41690 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_420 SM00240 Forkhead associated domain AMIS_42070 SM00052 Putative diguanylate phosphodiesterase AMIS_42070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_42070 SM00091 PAS domain AMIS_42070 SM00267 diguanylate cyclase AMIS_42260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_4230 SM00822 AMIS_4230 AMIS_42300 SM00421 helix_turn_helix, Lux Regulon AMIS_42300 SM00448 cheY-homologous receiver domain AMIS_42370 SM01266 AMIS_42370 AMIS_42500 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_42660 SM00882 Coenzyme A transferase AMIS_42670 SM00882 Coenzyme A transferase AMIS_42700 SM00855 Phosphoglycerate mutase family AMIS_42710 SM00822 AMIS_42710 AMIS_42720 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_42720 SM00387 Histidine kinase-like ATPases AMIS_42720 SM00388 His Kinase A (phosphoacceptor) domain AMIS_42820 SM00020 Trypsin-like serine protease AMIS_4290 SM00421 helix_turn_helix, Lux Regulon AMIS_4290 SM00448 cheY-homologous receiver domain AMIS_42900 SM00421 helix_turn_helix, Lux Regulon AMIS_42900 SM00448 cheY-homologous receiver domain AMIS_42990 SM00020 Trypsin-like serine protease AMIS_430 SM00331 Sigma factor PP2C-like phosphatases AMIS_430 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIS_43000 SM00822 AMIS_43000 AMIS_43040 SM00421 helix_turn_helix, Lux Regulon AMIS_43050 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_43100 SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. AMIS_43110 SM01240 AMIS_43110 AMIS_43120 SM00861 Transketolase, pyrimidine binding domain AMIS_43130 SM00829 Enoylreductase AMIS_43150 SM00327 von Willebrand factor (vWF) type A domain AMIS_43170 SM00822 AMIS_43170 AMIS_43200 SM00889 Elongation factor G, domain IV AMIS_43230 SM00382 ATPases associated with a variety of cellular activities AMIS_43280 SM00382 ATPases associated with a variety of cellular activities AMIS_43320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_43320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_43340 SM00421 helix_turn_helix, Lux Regulon AMIS_43350 SM01012 AMIS_43350 AMIS_4350 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIS_43560 SM00731 SprT homologues. AMIS_43570 SM00267 diguanylate cyclase AMIS_43620 SM00633 Glycosyl hydrolase family 10 AMIS_43740 SM00829 Enoylreductase AMIS_43750 SM00530 Helix-turn-helix XRE-family like proteins AMIS_43780 SM00028 Tetratricopeptide repeats AMIS_43800 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_43810 SM00849 Metallo-beta-lactamase superfamily AMIS_43920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_43940 SM00829 Enoylreductase AMIS_43950 SM00530 Helix-turn-helix XRE-family like proteins AMIS_43970 SM00656 AMIS_43970 AMIS_43970 SM00710 Parallel beta-helix repeats AMIS_43980 SM00656 AMIS_43980 AMIS_43980 SM00710 Parallel beta-helix repeats AMIS_43990 SM00656 AMIS_43990 AMIS_44040 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_44110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_44110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_44140 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMIS_44210 SM00813 Alpha-L-arabinofuranosidase C-terminus AMIS_44220 SM00354 helix_turn _helix lactose operon repressor AMIS_44240 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIS_4430 SM00858 AMIS_4430 AMIS_44300 SM01266 AMIS_44300 AMIS_44310 SM00825 Beta-ketoacyl synthase AMIS_44440 SM00028 Tetratricopeptide repeats AMIS_44440 SM00255 Toll - interleukin 1 - resistance AMIS_44490 SM00342 helix_turn_helix, arabinose operon control protein AMIS_44580 SM00458 Ricin-type beta-trefoil AMIS_4460 SM00052 Putative diguanylate phosphodiesterase AMIS_4460 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_4460 SM00267 diguanylate cyclase AMIS_44600 SM00342 helix_turn_helix, arabinose operon control protein AMIS_44610 SM00382 ATPases associated with a variety of cellular activities AMIS_44640 SM00422 helix_turn_helix, mercury resistance AMIS_44780 SM00382 ATPases associated with a variety of cellular activities AMIS_44800 SM00387 Histidine kinase-like ATPases AMIS_44810 SM00421 helix_turn_helix, Lux Regulon AMIS_44810 SM00448 cheY-homologous receiver domain AMIS_44870 SM00382 ATPases associated with a variety of cellular activities AMIS_44880 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_44960 SM00773 Proposed nucleic acid binding domain AMIS_4510 SM00028 Tetratricopeptide repeats AMIS_45160 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_4520 SM00028 Tetratricopeptide repeats AMIS_45200 SM00862 Transcriptional regulatory protein, C terminal AMIS_45200 SM01043 Bacterial transcriptional activator domain AMIS_4550 SM00636 AMIS_4550 AMIS_45540 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMIS_45560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_45590 SM00382 ATPases associated with a variety of cellular activities AMIS_45680 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIS_45760 SM00422 helix_turn_helix, mercury resistance AMIS_45780 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_45780 SM00419 helix_turn_helix, cAMP Regulatory protein AMIS_4580 SM00822 AMIS_4580 AMIS_45840 SM00829 Enoylreductase AMIS_45890 SM00382 ATPases associated with a variety of cellular activities AMIS_45890 SM00421 helix_turn_helix, Lux Regulon AMIS_45910 SM00421 helix_turn_helix, Lux Regulon AMIS_45960 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_460 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_46070 SM00267 diguanylate cyclase AMIS_46090 SM00244 prohibitin homologues AMIS_46100 SM00292 breast cancer carboxy-terminal domain AMIS_46100 SM00532 Ligase N family AMIS_46110 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_46170 SM00487 DEAD-like helicases superfamily AMIS_46170 SM00490 helicase superfamily c-terminal domain AMIS_46210 SM00382 ATPases associated with a variety of cellular activities AMIS_46230 SM00421 helix_turn_helix, Lux Regulon AMIS_46280 SM00829 Enoylreductase AMIS_46390 SM00421 helix_turn_helix, Lux Regulon AMIS_46390 SM00448 cheY-homologous receiver domain AMIS_46420 SM00382 ATPases associated with a variety of cellular activities AMIS_46450 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_46450 SM00895 AMIS_46450 AMIS_46550 SM00858 AMIS_46550 AMIS_46570 SM00354 helix_turn _helix lactose operon repressor AMIS_4660 SM00354 helix_turn _helix lactose operon repressor AMIS_46630 SM00849 Metallo-beta-lactamase superfamily AMIS_46650 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_46690 SM00320 WD40 repeats AMIS_46790 SM00091 PAS domain AMIS_46790 SM00331 Sigma factor PP2C-like phosphatases AMIS_46790 SM00387 Histidine kinase-like ATPases AMIS_46790 SM00388 His Kinase A (phosphoacceptor) domain AMIS_46790 SM00448 cheY-homologous receiver domain AMIS_46830 SM00382 ATPases associated with a variety of cellular activities AMIS_46840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_46890 SM00458 Ricin-type beta-trefoil AMIS_4690 SM00382 ATPases associated with a variety of cellular activities AMIS_46960 SM00257 Lysin motif AMIS_470 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_470 SM00740 AMIS_470 AMIS_47070 SM00421 helix_turn_helix, Lux Regulon AMIS_47070 SM00448 cheY-homologous receiver domain AMIS_4710 SM00052 Putative diguanylate phosphodiesterase AMIS_4710 SM00267 diguanylate cyclase AMIS_47100 SM00382 ATPases associated with a variety of cellular activities AMIS_47150 SM00354 helix_turn _helix lactose operon repressor AMIS_47160 SM00354 helix_turn _helix lactose operon repressor AMIS_4720 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_47240 SM00382 ATPases associated with a variety of cellular activities AMIS_47250 SM00382 ATPases associated with a variety of cellular activities AMIS_47310 SM00091 PAS domain AMIS_47310 SM00387 Histidine kinase-like ATPases AMIS_47310 SM00388 His Kinase A (phosphoacceptor) domain AMIS_47320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_47320 SM00091 PAS domain AMIS_47320 SM00387 Histidine kinase-like ATPases AMIS_47320 SM00388 His Kinase A (phosphoacceptor) domain AMIS_47350 SM00421 helix_turn_helix, Lux Regulon AMIS_47350 SM00448 cheY-homologous receiver domain AMIS_47360 SM00387 Histidine kinase-like ATPases AMIS_4740 SM00382 ATPases associated with a variety of cellular activities AMIS_47690 SM00344 helix_turn_helix ASNC type AMIS_47710 SM00421 helix_turn_helix, Lux Regulon AMIS_47710 SM00448 cheY-homologous receiver domain AMIS_47730 SM00382 ATPases associated with a variety of cellular activities AMIS_47750 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMIS_47750 SM00475 5'-3' exonuclease AMIS_47760 SM00052 Putative diguanylate phosphodiesterase AMIS_47760 SM00091 PAS domain AMIS_47760 SM00267 diguanylate cyclase AMIS_4780 SM00996 S-adenosyl-L-homocysteine hydrolase AMIS_4780 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIS_47800 SM00267 diguanylate cyclase AMIS_47860 SM00267 diguanylate cyclase AMIS_47870 SM00342 helix_turn_helix, arabinose operon control protein AMIS_47980 SM00342 helix_turn_helix, arabinose operon control protein AMIS_4800 SM00354 helix_turn _helix lactose operon repressor AMIS_48050 SM00422 helix_turn_helix, mercury resistance AMIS_48070 SM00642 Alpha-amylase domain AMIS_4810 SM00710 Parallel beta-helix repeats AMIS_48100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_48100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_48130 SM00331 Sigma factor PP2C-like phosphatases AMIS_48160 SM00267 diguanylate cyclase AMIS_48170 SM01350 AMIS_48170 AMIS_48190 SM00052 Putative diguanylate phosphodiesterase AMIS_48190 SM00267 diguanylate cyclase AMIS_48310 SM00487 DEAD-like helicases superfamily AMIS_48310 SM00490 helicase superfamily c-terminal domain AMIS_4840 SM00421 helix_turn_helix, Lux Regulon AMIS_48400 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_48500 SM00382 ATPases associated with a variety of cellular activities AMIS_48540 SM00257 Lysin motif AMIS_48560 SM00382 ATPases associated with a variety of cellular activities AMIS_48680 SM00421 helix_turn_helix, Lux Regulon AMIS_48710 SM00382 ATPases associated with a variety of cellular activities AMIS_48730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_48730 SM00387 Histidine kinase-like ATPases AMIS_48730 SM00388 His Kinase A (phosphoacceptor) domain AMIS_48740 SM00448 cheY-homologous receiver domain AMIS_48740 SM00862 Transcriptional regulatory protein, C terminal AMIS_48780 SM00421 helix_turn_helix, Lux Regulon AMIS_4880 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_48800 SM00855 Phosphoglycerate mutase family AMIS_48830 SM00650 Ribosomal RNA adenine dimethylases AMIS_48860 SM00354 helix_turn _helix lactose operon repressor AMIS_48960 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_49000 SM00421 helix_turn_helix, Lux Regulon AMIS_49000 SM00448 cheY-homologous receiver domain AMIS_49080 SM00382 ATPases associated with a variety of cellular activities AMIS_49100 SM00240 Forkhead associated domain AMIS_49100 SM00382 ATPases associated with a variety of cellular activities AMIS_49120 SM00495 Chitin-binding domain type 3 AMIS_49200 SM00354 helix_turn _helix lactose operon repressor AMIS_49260 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_49310 SM00421 helix_turn_helix, Lux Regulon AMIS_49310 SM00448 cheY-homologous receiver domain AMIS_49330 SM00382 ATPases associated with a variety of cellular activities AMIS_49370 SM00327 von Willebrand factor (vWF) type A domain AMIS_49370 SM00609 Vault protein Inter-alpha-Trypsin domain AMIS_49380 SM00458 Ricin-type beta-trefoil AMIS_49400 SM00382 ATPases associated with a variety of cellular activities AMIS_49440 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIS_49480 SM00382 ATPases associated with a variety of cellular activities AMIS_49490 SM00382 ATPases associated with a variety of cellular activities AMIS_4950 SM00257 Lysin motif AMIS_49500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_49500 SM00387 Histidine kinase-like ATPases AMIS_49500 SM00388 His Kinase A (phosphoacceptor) domain AMIS_49590 SM00267 diguanylate cyclase AMIS_49630 SM00824 Thioesterase AMIS_49640 SM00823 Phosphopantetheine attachment site AMIS_49650 SM00823 Phosphopantetheine attachment site AMIS_49660 SM00382 ATPases associated with a variety of cellular activities AMIS_49680 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_49690 SM00923 MbtH-like protein AMIS_49760 SM00530 Helix-turn-helix XRE-family like proteins AMIS_49810 SM00421 helix_turn_helix, Lux Regulon AMIS_49810 SM00448 cheY-homologous receiver domain AMIS_49820 SM00387 Histidine kinase-like ATPases AMIS_49850 SM00382 ATPases associated with a variety of cellular activities AMIS_49850 SM00464 Found in ATP-dependent protease La (LON) AMIS_49860 SM00637 AMIS_49860 AMIS_49930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_49930 SM00387 Histidine kinase-like ATPases AMIS_49930 SM00388 His Kinase A (phosphoacceptor) domain AMIS_49940 SM00448 cheY-homologous receiver domain AMIS_49940 SM00862 Transcriptional regulatory protein, C terminal AMIS_49990 SM00028 Tetratricopeptide repeats AMIS_50000 SM00382 ATPases associated with a variety of cellular activities AMIS_50060 SM00382 ATPases associated with a variety of cellular activities AMIS_50210 SM00507 HNH nucleases AMIS_50350 SM00825 Beta-ketoacyl synthase AMIS_5040 SM00387 Histidine kinase-like ATPases AMIS_5040 SM00388 His Kinase A (phosphoacceptor) domain AMIS_50410 SM00823 Phosphopantetheine attachment site AMIS_50410 SM01294 AMIS_50410 AMIS_50430 SM00825 Beta-ketoacyl synthase AMIS_50500 SM00862 Transcriptional regulatory protein, C terminal AMIS_50500 SM01043 Bacterial transcriptional activator domain AMIS_50510 SM00849 Metallo-beta-lactamase superfamily AMIS_5060 SM01133 AMIS_5060 AMIS_50640 SM00825 Beta-ketoacyl synthase AMIS_50690 SM00382 ATPases associated with a variety of cellular activities AMIS_5070 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_5070 SM00866 AMIS_5070 AMIS_5080 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_50800 SM00387 Histidine kinase-like ATPases AMIS_50950 SM00331 Sigma factor PP2C-like phosphatases AMIS_50960 SM00341 Helicase and RNase D C-terminal AMIS_50960 SM00487 DEAD-like helicases superfamily AMIS_50960 SM00490 helicase superfamily c-terminal domain AMIS_50960 SM00956 AMIS_50960 AMIS_50970 SM00867 YceI-like domain AMIS_51050 SM00637 AMIS_51050 AMIS_51100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMIS_51170 SM00642 Alpha-amylase domain AMIS_51180 SM00507 HNH nucleases AMIS_5120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_5120 SM00387 Histidine kinase-like ATPases AMIS_5120 SM00388 His Kinase A (phosphoacceptor) domain AMIS_51210 SM00637 AMIS_51210 AMIS_51220 SM00637 AMIS_51220 AMIS_51250 SM00984 UDP binding domain AMIS_51290 SM00382 ATPases associated with a variety of cellular activities AMIS_5130 SM00448 cheY-homologous receiver domain AMIS_5130 SM00862 Transcriptional regulatory protein, C terminal AMIS_51300 SM00382 ATPases associated with a variety of cellular activities AMIS_51350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_51350 SM00387 Histidine kinase-like ATPases AMIS_51350 SM00388 His Kinase A (phosphoacceptor) domain AMIS_51360 SM00448 cheY-homologous receiver domain AMIS_51360 SM00862 Transcriptional regulatory protein, C terminal AMIS_51380 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_51390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_51390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_51420 SM00903 Flavin reductase like domain AMIS_51510 SM00382 ATPases associated with a variety of cellular activities AMIS_51550 SM00354 helix_turn _helix lactose operon repressor AMIS_51650 SM00849 Metallo-beta-lactamase superfamily AMIS_51700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_51700 SM00387 Histidine kinase-like ATPases AMIS_51700 SM00388 His Kinase A (phosphoacceptor) domain AMIS_51710 SM00448 cheY-homologous receiver domain AMIS_51710 SM00862 Transcriptional regulatory protein, C terminal AMIS_51740 SM00448 cheY-homologous receiver domain AMIS_51740 SM00862 Transcriptional regulatory protein, C terminal AMIS_51750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_51750 SM00387 Histidine kinase-like ATPases AMIS_51750 SM00388 His Kinase A (phosphoacceptor) domain AMIS_5180 SM00331 Sigma factor PP2C-like phosphatases AMIS_5180 SM00448 cheY-homologous receiver domain AMIS_51800 SM00382 ATPases associated with a variety of cellular activities AMIS_51810 SM00422 helix_turn_helix, mercury resistance AMIS_51830 SM00422 helix_turn_helix, mercury resistance AMIS_51840 SM00240 Forkhead associated domain AMIS_5190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_5190 SM00387 Histidine kinase-like ATPases AMIS_5190 SM00388 His Kinase A (phosphoacceptor) domain AMIS_51900 SM00342 helix_turn_helix, arabinose operon control protein AMIS_51910 SM00327 von Willebrand factor (vWF) type A domain AMIS_51950 SM00382 ATPases associated with a variety of cellular activities AMIS_5200 SM00448 cheY-homologous receiver domain AMIS_52020 SM00342 helix_turn_helix, arabinose operon control protein AMIS_5220 SM00822 AMIS_5220 AMIS_52210 SM00382 ATPases associated with a variety of cellular activities AMIS_52240 SM00354 helix_turn _helix lactose operon repressor AMIS_52270 SM00235 Zinc-dependent metalloprotease AMIS_52330 SM00267 diguanylate cyclase AMIS_52350 SM00382 ATPases associated with a variety of cellular activities AMIS_52400 SM00260 Two component signalling adaptor domain AMIS_52410 SM00138 Methyltransferase, chemotaxis proteins AMIS_52420 SM00260 Two component signalling adaptor domain AMIS_52430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_52440 SM00073 Histidine Phosphotransfer domain AMIS_52440 SM00260 Two component signalling adaptor domain AMIS_52440 SM00387 Histidine kinase-like ATPases AMIS_52440 SM00448 cheY-homologous receiver domain AMIS_52450 SM00448 cheY-homologous receiver domain AMIS_52460 SM00387 Histidine kinase-like ATPases AMIS_52460 SM00388 His Kinase A (phosphoacceptor) domain AMIS_52460 SM00448 cheY-homologous receiver domain AMIS_52470 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AMIS_52490 SM00382 ATPases associated with a variety of cellular activities AMIS_52510 SM00421 helix_turn_helix, Lux Regulon AMIS_52510 SM00448 cheY-homologous receiver domain AMIS_52570 SM00495 Chitin-binding domain type 3 AMIS_52580 SM00530 Helix-turn-helix XRE-family like proteins AMIS_5260 SM00637 AMIS_5260 AMIS_52660 SM00014 Acid phosphatase homologues AMIS_52670 SM00014 Acid phosphatase homologues AMIS_52680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_52680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_5270 SM00822 AMIS_5270 AMIS_52700 SM00382 ATPases associated with a variety of cellular activities AMIS_52800 SM00382 ATPases associated with a variety of cellular activities AMIS_52810 SM00637 AMIS_52810 AMIS_52850 SM00387 Histidine kinase-like ATPases AMIS_52860 SM00421 helix_turn_helix, Lux Regulon AMIS_52860 SM00448 cheY-homologous receiver domain AMIS_52870 SM00382 ATPases associated with a variety of cellular activities AMIS_52940 SM00382 ATPases associated with a variety of cellular activities AMIS_52950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_52950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_52990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_52990 SM00387 Histidine kinase-like ATPases AMIS_52990 SM00388 His Kinase A (phosphoacceptor) domain AMIS_5300 SM00487 DEAD-like helicases superfamily AMIS_5300 SM00490 helicase superfamily c-terminal domain AMIS_53000 SM00448 cheY-homologous receiver domain AMIS_53000 SM00862 Transcriptional regulatory protein, C terminal AMIS_53010 SM00900 AMIS_53010 AMIS_53060 SM00530 Helix-turn-helix XRE-family like proteins AMIS_53130 SM00267 diguanylate cyclase AMIS_53140 SM00028 Tetratricopeptide repeats AMIS_53140 SM00862 Transcriptional regulatory protein, C terminal AMIS_53140 SM01043 Bacterial transcriptional activator domain AMIS_53150 SM00382 ATPases associated with a variety of cellular activities AMIS_53190 SM00382 ATPases associated with a variety of cellular activities AMIS_53210 SM00421 helix_turn_helix, Lux Regulon AMIS_53210 SM00448 cheY-homologous receiver domain AMIS_53240 SM00052 Putative diguanylate phosphodiesterase AMIS_53270 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_53300 SM00331 Sigma factor PP2C-like phosphatases AMIS_53300 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIS_53310 SM00327 von Willebrand factor (vWF) type A domain AMIS_53320 SM00240 Forkhead associated domain AMIS_53330 SM00530 Helix-turn-helix XRE-family like proteins AMIS_53440 SM00487 DEAD-like helicases superfamily AMIS_53440 SM00490 helicase superfamily c-terminal domain AMIS_53440 SM01142 AMIS_53440 AMIS_53470 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMIS_5360 SM00487 DEAD-like helicases superfamily AMIS_5360 SM00490 helicase superfamily c-terminal domain AMIS_53630 SM00382 ATPases associated with a variety of cellular activities AMIS_53690 SM00421 helix_turn_helix, Lux Regulon AMIS_53690 SM00448 cheY-homologous receiver domain AMIS_53740 SM00382 ATPases associated with a variety of cellular activities AMIS_53800 SM00530 Helix-turn-helix XRE-family like proteins AMIS_53820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_53820 SM00866 AMIS_53820 AMIS_53850 SM00421 helix_turn_helix, Lux Regulon AMIS_53850 SM00448 cheY-homologous receiver domain AMIS_53890 SM00421 helix_turn_helix, Lux Regulon AMIS_53890 SM00448 cheY-homologous receiver domain AMIS_53940 SM00855 Phosphoglycerate mutase family AMIS_54020 SM00382 ATPases associated with a variety of cellular activities AMIS_54020 SM01086 C-terminal, D2-small domain, of ClpB protein AMIS_54080 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMIS_54130 SM00862 Transcriptional regulatory protein, C terminal AMIS_54140 SM00248 ankyrin repeats AMIS_54150 SM00957 SecA DEAD-like domain AMIS_54150 SM00958 SecA preprotein cross-linking domain AMIS_54220 SM00091 PAS domain AMIS_54220 SM00138 Methyltransferase, chemotaxis proteins AMIS_54310 SM00327 von Willebrand factor (vWF) type A domain AMIS_54310 SM00382 ATPases associated with a variety of cellular activities AMIS_54350 SM00052 Putative diguanylate phosphodiesterase AMIS_54350 SM00267 diguanylate cyclase AMIS_54380 SM00331 Sigma factor PP2C-like phosphatases AMIS_54430 SM00382 ATPases associated with a variety of cellular activities AMIS_54430 SM00487 DEAD-like helicases superfamily AMIS_54430 SM00490 helicase superfamily c-terminal domain AMIS_54430 SM00847 Helicase associated domain (HA2) Add an annotation AMIS_54450 SM00448 cheY-homologous receiver domain AMIS_54460 SM00387 Histidine kinase-like ATPases AMIS_54460 SM00388 His Kinase A (phosphoacceptor) domain AMIS_54460 SM01079 AMIS_54460 AMIS_54470 SM00047 Lysozyme subfamily 2 AMIS_54470 SM00287 Bacterial SH3 domain homologues AMIS_54480 SM00014 Acid phosphatase homologues AMIS_5450 SM00450 Rhodanese Homology Domain AMIS_54550 SM00642 Alpha-amylase domain AMIS_54560 SM00642 Alpha-amylase domain AMIS_54580 SM00642 Alpha-amylase domain AMIS_54610 SM00331 Sigma factor PP2C-like phosphatases AMIS_54610 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIS_54620 SM00316 Ribosomal protein S1-like RNA-binding domain AMIS_54620 SM00732 Likely ribonuclease with RNase H fold. AMIS_54630 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_54690 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMIS_54730 SM00637 AMIS_54730 AMIS_54740 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_54740 SM00267 diguanylate cyclase AMIS_5480 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMIS_54820 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_54850 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_54900 SM00382 ATPases associated with a variety of cellular activities AMIS_54960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_54960 SM00091 PAS domain AMIS_54960 SM00267 diguanylate cyclase AMIS_54980 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_54990 SM00354 helix_turn _helix lactose operon repressor AMIS_550 SM01091 Transporter associated domain AMIS_55000 SM00342 helix_turn_helix, arabinose operon control protein AMIS_55010 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMIS_55020 SM00354 helix_turn _helix lactose operon repressor AMIS_55030 SM00530 Helix-turn-helix XRE-family like proteins AMIS_55080 SM00656 AMIS_55080 AMIS_55140 SM00354 helix_turn _helix lactose operon repressor AMIS_55190 SM00344 helix_turn_helix ASNC type AMIS_55200 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMIS_55200 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMIS_55220 SM00495 Chitin-binding domain type 3 AMIS_55250 SM00382 ATPases associated with a variety of cellular activities AMIS_55250 SM00930 AMIS_55250 AMIS_55260 SM00421 helix_turn_helix, Lux Regulon AMIS_55260 SM00448 cheY-homologous receiver domain AMIS_55370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_55370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_55390 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_55450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_55450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_55500 SM00354 helix_turn _helix lactose operon repressor AMIS_55530 SM00862 Transcriptional regulatory protein, C terminal AMIS_55530 SM01043 Bacterial transcriptional activator domain AMIS_55540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_55680 SM00382 ATPases associated with a variety of cellular activities AMIS_55700 SM00354 helix_turn _helix lactose operon repressor AMIS_55720 SM01007 Class II Aldolase and Adducin N-terminal domain AMIS_55780 SM00829 Enoylreductase AMIS_55830 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_55850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_55910 SM00382 ATPases associated with a variety of cellular activities AMIS_55950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_55950 SM01012 AMIS_55950 AMIS_55960 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_55960 SM01012 AMIS_55960 AMIS_55970 SM00014 Acid phosphatase homologues AMIS_55980 SM00915 Jacalin-like lectin domain AMIS_560 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_56010 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIS_56010 SM01134 AMIS_56010 AMIS_56130 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_56180 SM00382 ATPases associated with a variety of cellular activities AMIS_56220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_56230 SM01120 AMIS_56230 AMIS_56280 SM00822 AMIS_56280 AMIS_56360 SM00530 Helix-turn-helix XRE-family like proteins AMIS_56410 SM00813 Alpha-L-arabinofuranosidase C-terminus AMIS_56530 SM00822 AMIS_56530 AMIS_56540 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_56560 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIS_56590 SM00382 ATPases associated with a variety of cellular activities AMIS_56600 SM00382 ATPases associated with a variety of cellular activities AMIS_56640 SM00052 Putative diguanylate phosphodiesterase AMIS_56640 SM00267 diguanylate cyclase AMIS_56720 SM00861 Transketolase, pyrimidine binding domain AMIS_56860 SM00382 ATPases associated with a variety of cellular activities AMIS_56870 SM00382 ATPases associated with a variety of cellular activities AMIS_56940 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMIS_56960 SM00382 ATPases associated with a variety of cellular activities AMIS_56990 SM00631 AMIS_56990 AMIS_57150 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_57160 SM00903 Flavin reductase like domain AMIS_57230 SM00886 Stress responsive A/B Barrel Domain AMIS_57340 SM00382 ATPases associated with a variety of cellular activities AMIS_57350 SM00382 ATPases associated with a variety of cellular activities AMIS_57680 SM00354 helix_turn _helix lactose operon repressor AMIS_57760 SM00327 von Willebrand factor (vWF) type A domain AMIS_57780 SM00382 ATPases associated with a variety of cellular activities AMIS_57810 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMIS_57830 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMIS_57940 SM00632 AMIS_57940 AMIS_57940 SM00642 Alpha-amylase domain AMIS_57940 SM01065 Starch binding domain AMIS_57980 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_5810 SM00450 Rhodanese Homology Domain AMIS_58260 SM00984 UDP binding domain AMIS_5830 SM00052 Putative diguanylate phosphodiesterase AMIS_5830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_5830 SM00267 diguanylate cyclase AMIS_58300 SM00421 helix_turn_helix, Lux Regulon AMIS_58310 SM00631 AMIS_58310 AMIS_58380 SM00838 Elongation factor G C-terminus AMIS_58380 SM00889 Elongation factor G, domain IV AMIS_58490 SM00448 cheY-homologous receiver domain AMIS_58500 SM00387 Histidine kinase-like ATPases AMIS_58540 SM00382 ATPases associated with a variety of cellular activities AMIS_58560 SM00862 Transcriptional regulatory protein, C terminal AMIS_58560 SM01043 Bacterial transcriptional activator domain AMIS_58590 SM00656 AMIS_58590 AMIS_58590 SM00710 Parallel beta-helix repeats AMIS_58620 SM01065 Starch binding domain AMIS_58660 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIS_58770 SM00822 AMIS_58770 AMIS_58770 SM00823 Phosphopantetheine attachment site AMIS_58770 SM00825 Beta-ketoacyl synthase AMIS_58770 SM01294 AMIS_58770 AMIS_5880 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMIS_58950 SM00829 Enoylreductase AMIS_58990 SM00862 Transcriptional regulatory protein, C terminal AMIS_58990 SM01043 Bacterial transcriptional activator domain AMIS_5900 SM00382 ATPases associated with a variety of cellular activities AMIS_59110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_59110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_59150 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMIS_59250 SM00060 Fibronectin type 3 domain AMIS_59310 SM00342 helix_turn_helix, arabinose operon control protein AMIS_59380 SM00637 AMIS_59380 AMIS_59430 SM00530 Helix-turn-helix XRE-family like proteins AMIS_59470 SM00098 Alkaline phosphatase homologues AMIS_59480 SM00342 helix_turn_helix, arabinose operon control protein AMIS_5950 SM00663 RNA polymerase I subunit A N-terminus AMIS_59520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_59520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_59590 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_59590 SM00866 AMIS_59590 AMIS_59630 SM00382 ATPases associated with a variety of cellular activities AMIS_59700 SM00382 ATPases associated with a variety of cellular activities AMIS_59710 SM00382 ATPases associated with a variety of cellular activities AMIS_59740 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_59790 SM00530 Helix-turn-helix XRE-family like proteins AMIS_59860 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMIS_59870 SM01130 AMIS_59870 AMIS_59930 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_6000 SM00838 Elongation factor G C-terminus AMIS_6000 SM00889 Elongation factor G, domain IV AMIS_60020 SM00422 helix_turn_helix, mercury resistance AMIS_60020 SM00871 Bacterial transcription activator, effector binding domain AMIS_60050 SM00331 Sigma factor PP2C-like phosphatases AMIS_60070 SM00829 Enoylreductase AMIS_60120 SM00823 Phosphopantetheine attachment site AMIS_60130 SM00642 Alpha-amylase domain AMIS_60150 SM00458 Ricin-type beta-trefoil AMIS_60170 SM00260 Two component signalling adaptor domain AMIS_60180 SM00382 ATPases associated with a variety of cellular activities AMIS_6020 SM01403 AMIS_6020 AMIS_60210 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_60230 SM00487 DEAD-like helicases superfamily AMIS_60230 SM00490 helicase superfamily c-terminal domain AMIS_60250 SM00487 DEAD-like helicases superfamily AMIS_60250 SM00490 helicase superfamily c-terminal domain AMIS_60260 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_60350 SM00382 ATPases associated with a variety of cellular activities AMIS_60370 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_60450 SM00108 Bulb-type mannose-specific lectin AMIS_60450 SM00458 Ricin-type beta-trefoil AMIS_60470 SM00530 Helix-turn-helix XRE-family like proteins AMIS_60510 SM00458 Ricin-type beta-trefoil AMIS_60510 SM00636 AMIS_60510 AMIS_60520 SM00631 AMIS_60520 AMIS_60550 SM00020 Trypsin-like serine protease AMIS_6060 SM01382 AMIS_6060 AMIS_6060 SM01383 AMIS_6060 AMIS_60670 SM00382 ATPases associated with a variety of cellular activities AMIS_60690 SM00052 Putative diguanylate phosphodiesterase AMIS_60690 SM00267 diguanylate cyclase AMIS_60760 SM00363 S4 RNA-binding domain AMIS_60840 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMIS_60840 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMIS_6090 SM00322 K homology RNA-binding domain AMIS_60980 SM00363 S4 RNA-binding domain AMIS_61020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_61120 SM00829 Enoylreductase AMIS_61170 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIS_61170 SM01134 AMIS_61170 AMIS_61250 SM00530 Helix-turn-helix XRE-family like proteins AMIS_6130 SM01374 AMIS_6130 AMIS_61330 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_61350 SM00855 Phosphoglycerate mutase family AMIS_61380 SM00052 Putative diguanylate phosphodiesterase AMIS_61380 SM00267 diguanylate cyclase AMIS_61380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_6140 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMIS_61400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_61400 SM00895 AMIS_61400 AMIS_61420 SM00642 Alpha-amylase domain AMIS_61430 SM00642 Alpha-amylase domain AMIS_61470 SM00354 helix_turn _helix lactose operon repressor AMIS_61580 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMIS_61630 SM01217 AMIS_61630 AMIS_61700 SM00327 von Willebrand factor (vWF) type A domain AMIS_61810 SM00873 B3/4 domain AMIS_61810 SM00874 tRNA synthetase B5 domain AMIS_61810 SM00896 Ferredoxin-fold anticodon binding domain AMIS_61830 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMIS_61900 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_61900 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMIS_61920 SM00382 ATPases associated with a variety of cellular activities AMIS_61980 SM00563 Phosphate acyltransferases AMIS_61990 SM00267 diguanylate cyclase AMIS_61990 SM00448 cheY-homologous receiver domain AMIS_62080 SM01409 AMIS_62080 AMIS_62090 SM00072 Guanylate kinase homologues. AMIS_62110 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMIS_62140 SM00851 MGS-like domain AMIS_62140 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMIS_62150 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMIS_62190 SM00530 Helix-turn-helix XRE-family like proteins AMIS_62210 SM00841 Elongation factor P, C-terminal AMIS_62210 SM01185 AMIS_62210 AMIS_62320 SM00732 Likely ribonuclease with RNase H fold. AMIS_62330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMIS_62370 SM00382 ATPases associated with a variety of cellular activities AMIS_62400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_62410 SM00871 Bacterial transcription activator, effector binding domain AMIS_62460 SM01119 AMIS_62460 AMIS_62540 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_62660 SM01209 AMIS_62660 AMIS_62720 SM00849 Metallo-beta-lactamase superfamily AMIS_62750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_62750 SM00954 Region found in RelA / SpoT proteins AMIS_62790 SM01323 AMIS_62790 AMIS_62800 SM00382 ATPases associated with a variety of cellular activities AMIS_62810 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIS_62910 SM00838 Elongation factor G C-terminus AMIS_62910 SM00889 Elongation factor G, domain IV AMIS_62950 SM00267 diguanylate cyclase AMIS_62960 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMIS_62980 SM00448 cheY-homologous receiver domain AMIS_62980 SM00862 Transcriptional regulatory protein, C terminal AMIS_62990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_62990 SM00387 Histidine kinase-like ATPases AMIS_630 SM00331 Sigma factor PP2C-like phosphatases AMIS_63000 SM00458 Ricin-type beta-trefoil AMIS_63060 SM00357 Cold shock protein domain AMIS_6310 SM00363 S4 RNA-binding domain AMIS_6310 SM01390 AMIS_6310 AMIS_63170 SM00487 DEAD-like helicases superfamily AMIS_63170 SM00490 helicase superfamily c-terminal domain AMIS_6320 SM00662 RNA polymerases D AMIS_63240 SM00354 helix_turn _helix lactose operon repressor AMIS_63280 SM00382 ATPases associated with a variety of cellular activities AMIS_63290 SM00382 ATPases associated with a variety of cellular activities AMIS_63320 SM00849 Metallo-beta-lactamase superfamily AMIS_63330 SM00421 helix_turn_helix, Lux Regulon AMIS_63370 SM00342 helix_turn_helix, arabinose operon control protein AMIS_63410 SM00421 helix_turn_helix, Lux Regulon AMIS_63410 SM00448 cheY-homologous receiver domain AMIS_63440 SM00382 ATPases associated with a variety of cellular activities AMIS_63550 SM00530 Helix-turn-helix XRE-family like proteins AMIS_63570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_63570 SM00331 Sigma factor PP2C-like phosphatases AMIS_63660 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_63680 SM00155 Phospholipase D. Active site motifs. AMIS_6370 SM00382 ATPases associated with a variety of cellular activities AMIS_63820 SM00487 DEAD-like helicases superfamily AMIS_63820 SM00490 helicase superfamily c-terminal domain AMIS_63820 SM00847 Helicase associated domain (HA2) Add an annotation AMIS_63830 SM00052 Putative diguanylate phosphodiesterase AMIS_63830 SM00267 diguanylate cyclase AMIS_63840 SM00331 Sigma factor PP2C-like phosphatases AMIS_63840 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMIS_63860 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_63870 SM01234 AMIS_63870 AMIS_63880 SM00642 Alpha-amylase domain AMIS_63890 SM00642 Alpha-amylase domain AMIS_63900 SM00642 Alpha-amylase domain AMIS_63960 SM00060 Fibronectin type 3 domain AMIS_64040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_64040 SM00387 Histidine kinase-like ATPases AMIS_64040 SM00388 His Kinase A (phosphoacceptor) domain AMIS_64180 SM00331 Sigma factor PP2C-like phosphatases AMIS_64190 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_64290 SM00487 DEAD-like helicases superfamily AMIS_64290 SM00490 helicase superfamily c-terminal domain AMIS_64300 SM00867 YceI-like domain AMIS_64310 SM00421 helix_turn_helix, Lux Regulon AMIS_64390 SM00354 helix_turn _helix lactose operon repressor AMIS_64410 SM00382 ATPases associated with a variety of cellular activities AMIS_64440 SM00382 ATPases associated with a variety of cellular activities AMIS_64500 SM00434 DNA Topoisomerase IV AMIS_64510 SM00387 Histidine kinase-like ATPases AMIS_64510 SM00433 TopoisomeraseII AMIS_64520 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMIS_64530 SM00421 helix_turn_helix, Lux Regulon AMIS_64560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_64560 SM00387 Histidine kinase-like ATPases AMIS_64560 SM00388 His Kinase A (phosphoacceptor) domain AMIS_64570 SM00448 cheY-homologous receiver domain AMIS_64570 SM00862 Transcriptional regulatory protein, C terminal AMIS_64630 SM00327 von Willebrand factor (vWF) type A domain AMIS_64730 SM00788 Adenylosuccinate synthetase AMIS_64770 SM00382 ATPases associated with a variety of cellular activities AMIS_64880 SM00354 helix_turn _helix lactose operon repressor AMIS_64920 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_64930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_64930 SM00091 PAS domain AMIS_64930 SM00387 Histidine kinase-like ATPases AMIS_64930 SM00388 His Kinase A (phosphoacceptor) domain AMIS_64930 SM00448 cheY-homologous receiver domain AMIS_64940 SM01400 AMIS_64940 AMIS_64950 SM00382 ATPases associated with a variety of cellular activities AMIS_64960 SM00382 ATPases associated with a variety of cellular activities AMIS_65030 SM00642 Alpha-amylase domain AMIS_65030 SM01066 Carbohydrate binding domain AMIS_6510 SM00387 Histidine kinase-like ATPases AMIS_65100 SM00903 Flavin reductase like domain AMIS_65120 SM00255 Toll - interleukin 1 - resistance AMIS_65120 SM00320 WD40 repeats AMIS_65140 SM00028 Tetratricopeptide repeats AMIS_65140 SM00862 Transcriptional regulatory protein, C terminal AMIS_65140 SM01043 Bacterial transcriptional activator domain AMIS_65150 SM00448 cheY-homologous receiver domain AMIS_65190 SM00530 Helix-turn-helix XRE-family like proteins AMIS_6520 SM00960 Roadblock/LC7 domain AMIS_65200 SM00829 Enoylreductase AMIS_65210 SM00387 Histidine kinase-like ATPases AMIS_65220 SM00421 helix_turn_helix, Lux Regulon AMIS_65220 SM00448 cheY-homologous receiver domain AMIS_65270 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMIS_65280 SM00862 Transcriptional regulatory protein, C terminal AMIS_65280 SM01043 Bacterial transcriptional activator domain AMIS_65310 SM00342 helix_turn_helix, arabinose operon control protein AMIS_65360 SM00267 diguanylate cyclase AMIS_65410 SM00014 Acid phosphatase homologues AMIS_65430 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMIS_65450 SM00849 Metallo-beta-lactamase superfamily AMIS_6550 SM00862 Transcriptional regulatory protein, C terminal AMIS_65500 SM00862 Transcriptional regulatory protein, C terminal AMIS_65510 SM00903 Flavin reductase like domain AMIS_65540 SM00421 helix_turn_helix, Lux Regulon AMIS_65540 SM00448 cheY-homologous receiver domain AMIS_65610 SM00342 helix_turn_helix, arabinose operon control protein AMIS_65640 SM00422 helix_turn_helix, mercury resistance AMIS_65690 SM00862 Transcriptional regulatory protein, C terminal AMIS_65690 SM01043 Bacterial transcriptional activator domain AMIS_65710 SM00829 Enoylreductase AMIS_65730 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AMIS_65760 SM00642 Alpha-amylase domain AMIS_65870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_65880 SM00354 helix_turn _helix lactose operon repressor AMIS_65920 SM00642 Alpha-amylase domain AMIS_65930 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AMIS_65930 SM00710 Parallel beta-helix repeats AMIS_65940 SM00947 Carbonic anhydrase AMIS_66020 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_66020 SM00387 Histidine kinase-like ATPases AMIS_66030 SM00448 cheY-homologous receiver domain AMIS_66060 SM00507 HNH nucleases AMIS_66140 SM00382 ATPases associated with a variety of cellular activities AMIS_66150 SM00382 ATPases associated with a variety of cellular activities AMIS_66160 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMIS_66170 SM00421 helix_turn_helix, Lux Regulon AMIS_66170 SM00448 cheY-homologous receiver domain AMIS_66180 SM00387 Histidine kinase-like ATPases AMIS_66200 SM00382 ATPases associated with a variety of cellular activities AMIS_66220 SM00382 ATPases associated with a variety of cellular activities AMIS_66280 SM00421 helix_turn_helix, Lux Regulon AMIS_66280 SM00448 cheY-homologous receiver domain AMIS_66290 SM00052 Putative diguanylate phosphodiesterase AMIS_66290 SM00091 PAS domain AMIS_66290 SM00267 diguanylate cyclase AMIS_66310 SM00606 Cellulose Binding Domain Type IV AMIS_6660 SM01005 Alanine racemase, C-terminal domain AMIS_66600 SM00458 Ricin-type beta-trefoil AMIS_66740 SM00327 von Willebrand factor (vWF) type A domain AMIS_66770 SM00327 von Willebrand factor (vWF) type A domain AMIS_66780 SM00327 von Willebrand factor (vWF) type A domain AMIS_66820 SM00633 Glycosyl hydrolase family 10 AMIS_66820 SM00637 AMIS_66820 AMIS_66850 SM00327 von Willebrand factor (vWF) type A domain AMIS_66890 SM00825 Beta-ketoacyl synthase AMIS_66890 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMIS_6690 SM00986 Uracil DNA glycosylase superfamily AMIS_6690 SM00987 UreE urease accessory protein, C-terminal domain AMIS_670 SM00855 Phosphoglycerate mutase family AMIS_67030 SM00382 ATPases associated with a variety of cellular activities AMIS_67090 SM00487 DEAD-like helicases superfamily AMIS_67290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMIS_67380 SM00900 AMIS_67380 AMIS_67480 SM01006 Siderophore biosynthesis protein domain AMIS_6750 SM00382 ATPases associated with a variety of cellular activities AMIS_67500 SM01006 Siderophore biosynthesis protein domain AMIS_67530 SM00637 AMIS_67530 AMIS_67540 SM00813 Alpha-L-arabinofuranosidase C-terminus AMIS_67580 SM00354 helix_turn _helix lactose operon repressor AMIS_67620 SM00091 PAS domain AMIS_67620 SM00267 diguanylate cyclase AMIS_67660 SM00421 helix_turn_helix, Lux Regulon AMIS_67660 SM00448 cheY-homologous receiver domain AMIS_6770 SM00883 Chaperonin 10 Kd subunit AMIS_67750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_67840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_67990 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_67990 SM00876 Biotin and Thiamin Synthesis associated domain AMIS_68050 SM00052 Putative diguanylate phosphodiesterase AMIS_68050 SM00091 PAS domain AMIS_68050 SM00267 diguanylate cyclase AMIS_6810 SM00382 ATPases associated with a variety of cellular activities AMIS_68120 SM00422 helix_turn_helix, mercury resistance AMIS_68330 SM00341 Helicase and RNase D C-terminal AMIS_68330 SM00474 3'-5' exonuclease AMIS_68370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_68370 SM00387 Histidine kinase-like ATPases AMIS_68370 SM00388 His Kinase A (phosphoacceptor) domain AMIS_68380 SM00448 cheY-homologous receiver domain AMIS_68380 SM00862 Transcriptional regulatory protein, C terminal AMIS_68420 SM00861 Transketolase, pyrimidine binding domain AMIS_68590 SM00382 ATPases associated with a variety of cellular activities AMIS_68590 SM00487 DEAD-like helicases superfamily AMIS_68660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_68680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_68690 SM00448 cheY-homologous receiver domain AMIS_68710 SM00073 Histidine Phosphotransfer domain AMIS_68710 SM00260 Two component signalling adaptor domain AMIS_68710 SM00387 Histidine kinase-like ATPases AMIS_68710 SM01231 AMIS_68710 AMIS_68720 SM00448 cheY-homologous receiver domain AMIS_68730 SM00138 Methyltransferase, chemotaxis proteins AMIS_68750 SM00448 cheY-homologous receiver domain AMIS_68760 SM00260 Two component signalling adaptor domain AMIS_68770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_68830 SM00881 CoA binding domain AMIS_68850 SM00529 Helix-turn-helix diphteria tox regulatory element AMIS_68850 SM00899 AMIS_68850 AMIS_6890 SM00421 helix_turn_helix, Lux Regulon AMIS_68960 SM00919 Malic enzyme, NAD binding domain AMIS_68960 SM01274 AMIS_68960 AMIS_69030 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_69050 SM00382 ATPases associated with a variety of cellular activities AMIS_69060 SM00062 Bacterial periplasmic substrate-binding proteins AMIS_69090 SM00322 K homology RNA-binding domain AMIS_69090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_6910 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_6910 SM01240 AMIS_6910 AMIS_69110 SM00382 ATPases associated with a variety of cellular activities AMIS_69120 SM00986 Uracil DNA glycosylase superfamily AMIS_69120 SM00987 UreE urease accessory protein, C-terminal domain AMIS_69130 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_69160 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_69170 SM00382 ATPases associated with a variety of cellular activities AMIS_69170 SM00487 DEAD-like helicases superfamily AMIS_69170 SM00490 helicase superfamily c-terminal domain AMIS_6920 SM01240 AMIS_6920 AMIS_69210 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIS_69210 SM01232 AMIS_69210 AMIS_69240 SM00530 Helix-turn-helix XRE-family like proteins AMIS_69270 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_69320 SM00382 ATPases associated with a variety of cellular activities AMIS_69320 SM00843 AMIS_69320 AMIS_69350 SM00849 Metallo-beta-lactamase superfamily AMIS_69360 SM01130 AMIS_69360 AMIS_69450 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_69470 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_69470 SM00419 helix_turn_helix, cAMP Regulatory protein AMIS_69540 SM00316 Ribosomal protein S1-like RNA-binding domain AMIS_69540 SM00322 K homology RNA-binding domain AMIS_69550 SM01387 AMIS_69550 AMIS_69560 SM00904 Riboflavin kinase AMIS_69650 SM00322 K homology RNA-binding domain AMIS_69730 SM00331 Sigma factor PP2C-like phosphatases AMIS_69780 SM01230 AMIS_69780 AMIS_69800 SM00422 helix_turn_helix, mercury resistance AMIS_69810 SM00387 Histidine kinase-like ATPases AMIS_69820 SM00421 helix_turn_helix, Lux Regulon AMIS_69820 SM00448 cheY-homologous receiver domain AMIS_69830 SM00382 ATPases associated with a variety of cellular activities AMIS_69870 SM00382 ATPases associated with a variety of cellular activities AMIS_69890 SM01012 AMIS_69890 AMIS_69900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_69900 SM01012 AMIS_69900 AMIS_69910 SM01012 AMIS_69910 AMIS_69920 SM00091 PAS domain AMIS_69920 SM00387 Histidine kinase-like ATPases AMIS_69920 SM00388 His Kinase A (phosphoacceptor) domain AMIS_69920 SM00448 cheY-homologous receiver domain AMIS_700 SM00796 Allophanate hydrolase subunit 1 AMIS_70030 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_70110 SM00382 ATPases associated with a variety of cellular activities AMIS_70290 SM00946 Prolyl-tRNA synthetase, C-terminal AMIS_70360 SM00382 ATPases associated with a variety of cellular activities AMIS_70360 SM00962 SRP54-type protein, GTPase domain AMIS_70360 SM00963 SRP54-type protein, helical bundle domain AMIS_70390 SM00984 UDP binding domain AMIS_7040 SM00421 helix_turn_helix, Lux Regulon AMIS_7040 SM00448 cheY-homologous receiver domain AMIS_70500 SM00938 Nitrogen regulatory protein P-II AMIS_70530 SM00382 ATPases associated with a variety of cellular activities AMIS_70530 SM00962 SRP54-type protein, GTPase domain AMIS_70530 SM00963 SRP54-type protein, helical bundle domain AMIS_70590 SM00968 SMC proteins Flexible Hinge Domain AMIS_70640 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIS_70640 SM01232 AMIS_70640 AMIS_70660 SM00358 Double-stranded RNA binding motif AMIS_70660 SM00535 Ribonuclease III family AMIS_70760 SM00487 DEAD-like helicases superfamily AMIS_70760 SM00490 helicase superfamily c-terminal domain AMIS_70770 SM01120 AMIS_70770 AMIS_70770 SM01121 AMIS_70770 AMIS_7080 SM00382 ATPases associated with a variety of cellular activities AMIS_70880 SM00563 Phosphate acyltransferases AMIS_7090 SM00382 ATPases associated with a variety of cellular activities AMIS_70940 SM00411 bacterial (prokaryotic) histone like domain AMIS_70970 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_70980 SM00421 helix_turn_helix, Lux Regulon AMIS_710 SM00797 Allophanate hydrolase subunit 2 AMIS_7100 SM00830 Chorismate mutase type II AMIS_71010 SM00849 Metallo-beta-lactamase superfamily AMIS_71040 SM00530 Helix-turn-helix XRE-family like proteins AMIS_71060 SM00382 ATPases associated with a variety of cellular activities AMIS_71130 SM00917 LeuA allosteric (dimerisation) domain AMIS_71140 SM00404 Protein tyrosine phosphatase, catalytic domain motif AMIS_71170 SM01329 AMIS_71170 AMIS_71230 SM00052 Putative diguanylate phosphodiesterase AMIS_71230 SM00267 diguanylate cyclase AMIS_71290 SM00354 helix_turn _helix lactose operon repressor AMIS_71300 SM00052 Putative diguanylate phosphodiesterase AMIS_71300 SM00091 PAS domain AMIS_71300 SM00267 diguanylate cyclase AMIS_71340 SM00458 Ricin-type beta-trefoil AMIS_71350 SM00845 GatB domain AMIS_71380 SM00052 Putative diguanylate phosphodiesterase AMIS_71380 SM00267 diguanylate cyclase AMIS_71390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMIS_71390 SM00292 breast cancer carboxy-terminal domain AMIS_71390 SM00532 Ligase N family AMIS_71430 SM00893 Electron transfer flavoprotein domain AMIS_71440 SM00893 Electron transfer flavoprotein domain AMIS_71530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMIS_71560 SM00382 ATPases associated with a variety of cellular activities AMIS_71670 SM00382 ATPases associated with a variety of cellular activities AMIS_7170 SM00881 CoA binding domain AMIS_71760 SM00382 ATPases associated with a variety of cellular activities AMIS_71920 SM00382 ATPases associated with a variety of cellular activities AMIS_72040 SM00226 Low molecular weight phosphatase family AMIS_72070 SM00267 diguanylate cyclase AMIS_7210 SM00798 AICARFT/IMPCHase bienzyme AMIS_7210 SM00851 MGS-like domain AMIS_72100 SM00937 AMIS_72100 AMIS_72160 SM00357 Cold shock protein domain AMIS_72160 SM00382 ATPases associated with a variety of cellular activities AMIS_72160 SM00959 Rho termination factor, N-terminal domain AMIS_72200 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_72230 SM00836 DALR anticodon binding domain AMIS_72230 SM01016 Arginyl tRNA synthetase N terminal dom AMIS_72320 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_72390 SM00342 helix_turn_helix, arabinose operon control protein AMIS_7240 SM01329 AMIS_7240 AMIS_72470 SM00822 AMIS_72470 AMIS_72480 SM00642 Alpha-amylase domain AMIS_72530 SM00495 Chitin-binding domain type 3 AMIS_72540 SM00495 Chitin-binding domain type 3 AMIS_72540 SM00636 AMIS_72540 AMIS_72550 SM00606 Cellulose Binding Domain Type IV AMIS_72580 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIS_72580 SM01232 AMIS_72580 AMIS_72650 SM00563 Phosphate acyltransferases AMIS_72670 SM00422 helix_turn_helix, mercury resistance AMIS_7270 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIS_7270 SM01134 AMIS_7270 AMIS_72710 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_72720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMIS_72730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_72730 SM00387 Histidine kinase-like ATPases AMIS_72730 SM00388 His Kinase A (phosphoacceptor) domain AMIS_72740 SM00448 cheY-homologous receiver domain AMIS_72740 SM00862 Transcriptional regulatory protein, C terminal AMIS_72750 SM00563 Phosphate acyltransferases AMIS_72780 SM00861 Transketolase, pyrimidine binding domain AMIS_72830 SM00829 Enoylreductase AMIS_72840 SM00919 Malic enzyme, NAD binding domain AMIS_72840 SM01274 AMIS_72840 AMIS_72880 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_72880 SM00895 AMIS_72880 AMIS_72900 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMIS_72970 SM00387 Histidine kinase-like ATPases AMIS_72990 SM00028 Tetratricopeptide repeats AMIS_73120 SM00458 Ricin-type beta-trefoil AMIS_73250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMIS_73340 SM00341 Helicase and RNase D C-terminal AMIS_73420 SM00382 ATPases associated with a variety of cellular activities AMIS_73450 SM00563 Phosphate acyltransferases AMIS_73460 SM00357 Cold shock protein domain AMIS_73580 SM00422 helix_turn_helix, mercury resistance AMIS_73580 SM00480 DNA polymerase III beta subunit AMIS_73780 SM00382 ATPases associated with a variety of cellular activities AMIS_73790 SM00382 ATPases associated with a variety of cellular activities AMIS_73910 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_73910 SM00866 AMIS_73910 AMIS_73920 SM00829 Enoylreductase AMIS_74030 SM01208 AMIS_74030 AMIS_74040 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_7410 SM00382 ATPases associated with a variety of cellular activities AMIS_74110 SM00530 Helix-turn-helix XRE-family like proteins AMIS_74170 SM00342 helix_turn_helix, arabinose operon control protein AMIS_74170 SM00478 endonuclease III AMIS_74170 SM01009 AlkA N-terminal domain AMIS_7430 SM00382 ATPases associated with a variety of cellular activities AMIS_74310 SM00020 Trypsin-like serine protease AMIS_74330 SM00670 Large family of predicted nucleotide-binding domains AMIS_74470 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_7450 SM00860 SMI1 / KNR4 family AMIS_74520 SM00878 Biotin carboxylase C-terminal domain AMIS_74590 SM00849 Metallo-beta-lactamase superfamily AMIS_74630 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_74690 SM01133 AMIS_74690 AMIS_74760 SM00960 Roadblock/LC7 domain AMIS_74770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_74770 SM00387 Histidine kinase-like ATPases AMIS_74810 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AMIS_74850 SM00382 ATPases associated with a variety of cellular activities AMIS_75020 SM01400 AMIS_75020 AMIS_75070 SM00382 ATPases associated with a variety of cellular activities AMIS_7510 SM00487 DEAD-like helicases superfamily AMIS_7510 SM00490 helicase superfamily c-terminal domain AMIS_7510 SM00982 AMIS_7510 AMIS_7510 SM01058 CarD-like/TRCF domain AMIS_75100 SM00650 Ribosomal RNA adenine dimethylases AMIS_75190 SM00530 Helix-turn-helix XRE-family like proteins AMIS_75210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_75240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_75240 SM00387 Histidine kinase-like ATPases AMIS_75300 SM00852 Probable molybdopterin binding domain AMIS_75320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_75320 SM00267 diguanylate cyclase AMIS_75320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_75340 SM00834 Putative regulatory protein AMIS_75420 SM00481 DNA polymerase alpha chain like domain AMIS_75480 SM00305 Hint (Hedgehog/Intein) domain C-terminal region AMIS_75480 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMIS_75490 SM00881 CoA binding domain AMIS_75560 SM00924 MgtE intracellular N domain AMIS_75600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMIS_7570 SM01192 AMIS_7570 AMIS_7570 SM01193 AMIS_7570 AMIS_75750 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMIS_75760 SM00834 Putative regulatory protein AMIS_75790 SM01004 Delta-aminolevulinic acid dehydratase AMIS_75830 SM00881 CoA binding domain AMIS_75890 SM00563 Phosphate acyltransferases AMIS_75910 SM01155 AMIS_75910 AMIS_75980 SM00448 cheY-homologous receiver domain AMIS_75980 SM00862 Transcriptional regulatory protein, C terminal AMIS_75990 SM00387 Histidine kinase-like ATPases AMIS_75990 SM00388 His Kinase A (phosphoacceptor) domain AMIS_76010 SM00855 Phosphoglycerate mutase family AMIS_76070 SM00448 cheY-homologous receiver domain AMIS_76100 SM00387 Histidine kinase-like ATPases AMIS_76100 SM00388 His Kinase A (phosphoacceptor) domain AMIS_76290 SM00382 ATPases associated with a variety of cellular activities AMIS_76490 SM00448 cheY-homologous receiver domain AMIS_7650 SM00986 Uracil DNA glycosylase superfamily AMIS_7650 SM00987 UreE urease accessory protein, C-terminal domain AMIS_76510 SM00448 cheY-homologous receiver domain AMIS_76520 SM00138 Methyltransferase, chemotaxis proteins AMIS_76530 SM00448 cheY-homologous receiver domain AMIS_76550 SM00260 Two component signalling adaptor domain AMIS_76560 SM00260 Two component signalling adaptor domain AMIS_76570 SM00073 Histidine Phosphotransfer domain AMIS_76570 SM01231 AMIS_76570 AMIS_76580 SM00448 cheY-homologous receiver domain AMIS_76580 SM00862 Transcriptional regulatory protein, C terminal AMIS_76630 SM00354 helix_turn _helix lactose operon repressor AMIS_76690 SM00530 Helix-turn-helix XRE-family like proteins AMIS_76790 SM00487 DEAD-like helicases superfamily AMIS_76790 SM00491 AMIS_76790 AMIS_76880 SM00382 ATPases associated with a variety of cellular activities AMIS_76930 SM00862 Transcriptional regulatory protein, C terminal AMIS_76960 SM00450 Rhodanese Homology Domain AMIS_76990 SM00883 Chaperonin 10 Kd subunit AMIS_770 SM00861 Transketolase, pyrimidine binding domain AMIS_77110 SM00382 ATPases associated with a variety of cellular activities AMIS_77110 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMIS_77130 SM00382 ATPases associated with a variety of cellular activities AMIS_77130 SM01073 Cell division protein 48 (CDC48) N-terminal domain AMIS_77160 SM00382 ATPases associated with a variety of cellular activities AMIS_77170 SM00420 helix_turn_helix, Deoxyribose operon repressor AMIS_77170 SM01134 AMIS_77170 AMIS_77290 SM00382 ATPases associated with a variety of cellular activities AMIS_77310 SM00357 Cold shock protein domain AMIS_77320 SM00564 beta-propeller repeat AMIS_77330 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMIS_77340 SM00840 AMIS_77340 AMIS_77370 SM00028 Tetratricopeptide repeats AMIS_77370 SM00862 Transcriptional regulatory protein, C terminal AMIS_77370 SM01043 Bacterial transcriptional activator domain AMIS_77410 SM00344 helix_turn_helix ASNC type AMIS_77490 SM00028 Tetratricopeptide repeats AMIS_77530 SM01058 CarD-like/TRCF domain AMIS_77610 SM00382 ATPases associated with a variety of cellular activities AMIS_77670 SM00478 endonuclease III AMIS_77670 SM00525 AMIS_77670 AMIS_77690 SM00382 ATPases associated with a variety of cellular activities AMIS_77690 SM01086 C-terminal, D2-small domain, of ClpB protein AMIS_77870 SM00905 Dihydroneopterin aldolase AMIS_7790 SM00116 Domain in cystathionine beta-synthase and other proteins. AMIS_78040 SM00382 ATPases associated with a variety of cellular activities AMIS_78110 SM00382 ATPases associated with a variety of cellular activities AMIS_78160 SM00478 endonuclease III AMIS_78160 SM00525 AMIS_78160 AMIS_78170 SM00854 Bacterial capsule synthesis protein PGA_cap AMIS_78180 SM00100 Cyclic nucleotide-monophosphate binding domain AMIS_78180 SM00419 helix_turn_helix, cAMP Regulatory protein AMIS_78200 SM00878 Biotin carboxylase C-terminal domain AMIS_78210 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_78220 SM00028 Tetratricopeptide repeats AMIS_78220 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMIS_78230 SM00849 Metallo-beta-lactamase superfamily AMIS_78300 SM00740 AMIS_78300 AMIS_78370 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMIS_78400 SM00917 LeuA allosteric (dimerisation) domain AMIS_78450 SM00382 ATPases associated with a variety of cellular activities AMIS_78460 SM00382 ATPases associated with a variety of cellular activities AMIS_78500 SM00493 AMIS_78500 AMIS_78520 SM00382 ATPases associated with a variety of cellular activities AMIS_7860 SM00880 AMIS_7860 AMIS_7860 SM01118 AMIS_7860 AMIS_78670 SM00481 DNA polymerase alpha chain like domain AMIS_78700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_78700 SM00387 Histidine kinase-like ATPases AMIS_78710 SM00960 Roadblock/LC7 domain AMIS_78820 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_78840 SM00267 diguanylate cyclase AMIS_78920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_78980 SM00564 beta-propeller repeat AMIS_79000 SM00495 Chitin-binding domain type 3 AMIS_79010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_79010 SM00387 Histidine kinase-like ATPases AMIS_79010 SM00388 His Kinase A (phosphoacceptor) domain AMIS_79020 SM00448 cheY-homologous receiver domain AMIS_79020 SM00862 Transcriptional regulatory protein, C terminal AMIS_79090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_79250 SM00382 ATPases associated with a variety of cellular activities AMIS_79270 SM00422 helix_turn_helix, mercury resistance AMIS_79280 SM00052 Putative diguanylate phosphodiesterase AMIS_79300 SM00886 Stress responsive A/B Barrel Domain AMIS_79370 SM00421 helix_turn_helix, Lux Regulon AMIS_79370 SM00862 Transcriptional regulatory protein, C terminal AMIS_79370 SM01043 Bacterial transcriptional activator domain AMIS_7940 SM00028 Tetratricopeptide repeats AMIS_79420 SM00822 AMIS_79420 AMIS_79450 SM00448 cheY-homologous receiver domain AMIS_79450 SM00862 Transcriptional regulatory protein, C terminal AMIS_79460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_79460 SM00387 Histidine kinase-like ATPases AMIS_79460 SM00388 His Kinase A (phosphoacceptor) domain AMIS_79490 SM00382 ATPases associated with a variety of cellular activities AMIS_79520 SM00382 ATPases associated with a variety of cellular activities AMIS_79540 SM00387 Histidine kinase-like ATPases AMIS_79550 SM00421 helix_turn_helix, Lux Regulon AMIS_79550 SM00448 cheY-homologous receiver domain AMIS_7960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMIS_79600 SM00382 ATPases associated with a variety of cellular activities AMIS_79620 SM00421 helix_turn_helix, Lux Regulon AMIS_79620 SM00448 cheY-homologous receiver domain AMIS_79650 SM00530 Helix-turn-helix XRE-family like proteins AMIS_79670 SM00530 Helix-turn-helix XRE-family like proteins AMIS_79690 SM00422 helix_turn_helix, mercury resistance AMIS_79700 SM00421 helix_turn_helix, Lux Regulon AMIS_79700 SM00448 cheY-homologous receiver domain AMIS_79770 SM00421 helix_turn_helix, Lux Regulon AMIS_79770 SM00448 cheY-homologous receiver domain AMIS_79970 SM00530 Helix-turn-helix XRE-family like proteins AMIS_80 SM00387 Histidine kinase-like ATPases AMIS_80 SM00433 TopoisomeraseII AMIS_80040 SM00829 Enoylreductase AMIS_80050 SM00422 helix_turn_helix, mercury resistance AMIS_80070 SM00861 Transketolase, pyrimidine binding domain AMIS_80210 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMIS_80210 SM01232 AMIS_80210 AMIS_80230 SM00387 Histidine kinase-like ATPases AMIS_80240 SM00448 cheY-homologous receiver domain AMIS_80240 SM00850 LytTr DNA-binding domain AMIS_80250 SM00448 cheY-homologous receiver domain AMIS_80250 SM00862 Transcriptional regulatory protein, C terminal AMIS_80260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_80260 SM00387 Histidine kinase-like ATPases AMIS_80260 SM00388 His Kinase A (phosphoacceptor) domain AMIS_80290 SM00382 ATPases associated with a variety of cellular activities AMIS_80330 SM00903 Flavin reductase like domain AMIS_80380 SM00450 Rhodanese Homology Domain AMIS_80400 SM00387 Histidine kinase-like ATPases AMIS_80400 SM00388 His Kinase A (phosphoacceptor) domain AMIS_80570 SM00344 helix_turn_helix ASNC type AMIS_8060 SM00052 Putative diguanylate phosphodiesterase AMIS_8060 SM00267 diguanylate cyclase AMIS_80670 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_80780 SM00852 Probable molybdopterin binding domain AMIS_80790 SM00852 Probable molybdopterin binding domain AMIS_80810 SM00052 Putative diguanylate phosphodiesterase AMIS_80810 SM00267 diguanylate cyclase AMIS_80850 SM00382 ATPases associated with a variety of cellular activities AMIS_80930 SM00518 AP endonuclease family 2 AMIS_81050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMIS_81080 SM00220 Serine/Threonine protein kinases, catalytic domain AMIS_81130 SM00646 AMIS_81130 AMIS_81180 SM00470 ParB-like nuclease domain AMIS_81210 SM00393 Putative single-stranded nucleic acids-binding domain AMIS_81230 SM01234 AMIS_81230 AMIS_8130 SM01001 AIR carboxylase AMIS_8160 SM00354 helix_turn _helix lactose operon repressor AMIS_8170 SM00346 helix_turn_helix isocitrate lyase regulation AMIS_8230 SM00354 helix_turn _helix lactose operon repressor AMIS_8280 SM00354 helix_turn _helix lactose operon repressor AMIS_8350 SM01012 AMIS_8350 AMIS_8360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_8360 SM01012 AMIS_8360 AMIS_8410 SM00354 helix_turn _helix lactose operon repressor AMIS_8420 SM00458 Ricin-type beta-trefoil AMIS_8430 SM00344 helix_turn_helix ASNC type AMIS_850 SM00271 DnaJ molecular chaperone homology domain AMIS_8560 SM00729 Elongator protein 3, MiaB family, Radical SAM AMIS_860 SM00422 helix_turn_helix, mercury resistance AMIS_8700 SM00996 S-adenosyl-L-homocysteine hydrolase AMIS_8700 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMIS_8710 SM00530 Helix-turn-helix XRE-family like proteins AMIS_8730 SM00448 cheY-homologous receiver domain AMIS_8730 SM00862 Transcriptional regulatory protein, C terminal AMIS_8740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMIS_8740 SM00387 Histidine kinase-like ATPases AMIS_8740 SM00388 His Kinase A (phosphoacceptor) domain AMIS_8790 SM00957 SecA DEAD-like domain AMIS_8790 SM00958 SecA preprotein cross-linking domain AMIS_8850 SM00937 AMIS_8850 AMIS_8860 SM00382 ATPases associated with a variety of cellular activities AMIS_8900 SM00637 AMIS_8900 AMIS_8910 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_8920 SM00829 Enoylreductase AMIS_90 SM00434 DNA Topoisomerase IV AMIS_9010 SM00842 Cell division protein FtsA AMIS_9050 SM00382 ATPases associated with a variety of cellular activities AMIS_9060 SM00382 ATPases associated with a variety of cellular activities AMIS_9070 SM00342 helix_turn_helix, arabinose operon control protein AMIS_910 SM00382 ATPases associated with a variety of cellular activities AMIS_910 SM01086 C-terminal, D2-small domain, of ClpB protein AMIS_9110 SM00052 Putative diguanylate phosphodiesterase AMIS_9110 SM00267 diguanylate cyclase AMIS_9190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMIS_9190 SM00331 Sigma factor PP2C-like phosphatases AMIS_9200 SM00943 Bifunctional DNA primase/polymerase, N-terminal AMIS_9260 SM00052 Putative diguanylate phosphodiesterase AMIS_9260 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMIS_9260 SM00267 diguanylate cyclase AMIS_9280 SM00347 helix_turn_helix multiple antibiotic resistance protein AMIS_9410 SM00232 JAB/MPN domain AMIS_9450 SM00849 Metallo-beta-lactamase superfamily AMIS_960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMIS_970 SM01007 Class II Aldolase and Adducin N-terminal domain AMIS_9710 SM00479 AMIS_9710 AMIS_9720 SM00637 AMIS_9720 AMIS_9800 SM00637 AMIS_9800 AMIS_9920 SM00530 Helix-turn-helix XRE-family like proteins AMIS_9980 SM00606 Cellulose Binding Domain Type IV AMIS_9980 SM01217 AMIS_9980